Query 002857
Match_columns 873
No_of_seqs 706 out of 4389
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 04:19:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002857.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002857hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 2.8E-51 9.7E-56 453.7 18.0 268 160-470 41-319 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 2E-51 7E-56 449.0 15.9 269 160-471 13-290 (299)
3 3omv_A RAF proto-oncogene seri 100.0 6.5E-51 2.2E-55 446.3 17.5 262 160-472 36-302 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 1.5E-50 5E-55 444.0 16.7 265 161-468 27-304 (308)
5 3hmm_A TGF-beta receptor type- 100.0 3E-49 1E-53 432.6 16.1 282 160-470 3-297 (303)
6 4ase_A Vascular endothelial gr 100.0 1.3E-48 4.3E-53 436.3 17.1 278 153-471 57-348 (353)
7 4b9d_A Serine/threonine-protei 100.0 9.9E-49 3.4E-53 435.7 14.7 251 160-463 24-276 (350)
8 4fih_A Serine/threonine-protei 100.0 4E-48 1.4E-52 430.2 18.0 250 160-463 74-323 (346)
9 3fpq_A Serine/threonine-protei 100.0 1E-47 3.5E-52 417.8 20.4 249 163-463 29-282 (290)
10 4g3f_A NF-kappa-beta-inducing 100.0 8.5E-48 2.9E-52 426.1 18.0 258 159-472 57-318 (336)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.3E-48 1.1E-52 424.9 11.7 251 160-464 32-285 (311)
12 4fie_A Serine/threonine-protei 100.0 4.8E-47 1.6E-51 431.6 18.8 250 160-463 151-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 1E-46 3.5E-51 406.9 16.0 246 160-463 13-262 (275)
14 4g31_A Eukaryotic translation 100.0 6.1E-46 2.1E-50 405.7 18.9 257 160-463 5-279 (299)
15 3ubd_A Ribosomal protein S6 ki 100.0 1.5E-46 5.1E-51 411.1 8.5 200 160-379 24-228 (304)
16 4b99_A Mitogen-activated prote 100.0 5.3E-44 1.8E-48 405.2 17.9 208 159-380 53-266 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.3E-42 4.5E-47 389.1 20.0 201 157-380 18-250 (361)
18 2qkw_B Protein kinase; three-h 100.0 1.4E-42 4.6E-47 379.5 17.9 285 150-470 29-315 (321)
19 3uim_A Brassinosteroid insensi 100.0 4.3E-42 1.5E-46 375.6 17.0 287 147-467 17-308 (326)
20 3s95_A LIMK-1, LIM domain kina 100.0 1.5E-41 5.1E-46 369.1 21.1 267 159-475 9-287 (310)
21 3uto_A Twitchin; kinase, muscl 100.0 4.3E-42 1.5E-46 406.8 18.1 253 159-463 156-410 (573)
22 2nru_A Interleukin-1 receptor- 100.0 8.2E-41 2.8E-45 362.0 24.0 283 146-469 11-305 (307)
23 3soc_A Activin receptor type-2 100.0 1.2E-41 4E-46 373.3 16.5 281 159-471 23-319 (322)
24 3v5w_A G-protein coupled recep 100.0 3E-41 1E-45 400.9 17.7 198 160-379 189-393 (689)
25 3ugc_A Tyrosine-protein kinase 100.0 3.2E-41 1.1E-45 363.5 15.1 278 159-472 9-293 (295)
26 3vhe_A Vascular endothelial gr 100.0 3.9E-41 1.3E-45 372.6 15.6 283 149-472 11-357 (359)
27 3q4u_A Activin receptor type-1 100.0 2E-40 6.9E-45 357.1 19.9 269 159-468 7-300 (301)
28 3fxz_A Serine/threonine-protei 100.0 1.8E-40 6.1E-45 360.0 19.5 251 159-463 19-269 (297)
29 2c30_A Serine/threonine-protei 100.0 5.4E-40 1.9E-44 360.4 22.0 263 147-463 22-294 (321)
30 3op5_A Serine/threonine-protei 100.0 2.5E-40 8.6E-45 368.8 19.6 277 158-473 33-332 (364)
31 2psq_A Fibroblast growth facto 100.0 2.9E-40 1E-44 370.2 19.8 271 159-472 80-366 (370)
32 3tki_A Serine/threonine-protei 100.0 3.1E-40 1E-44 362.9 19.2 254 159-463 6-261 (323)
33 3cbl_A C-FES, proto-oncogene t 100.0 4.9E-41 1.7E-45 377.1 13.1 262 158-471 112-375 (377)
34 3p86_A Serine/threonine-protei 100.0 3.4E-40 1.2E-44 360.4 19.4 264 157-473 34-301 (309)
35 3lb7_A RAF proto-oncogene seri 100.0 2.5E-40 8.7E-45 360.8 18.2 263 159-472 35-302 (307)
36 3poz_A Epidermal growth factor 100.0 1.8E-40 6.1E-45 364.6 16.6 261 159-472 14-280 (327)
37 3kul_A Ephrin type-A receptor 100.0 2.5E-40 8.6E-45 363.7 16.4 261 160-472 49-315 (325)
38 1csn_A Casein kinase-1; phosph 100.0 3.7E-39 1.3E-43 346.7 24.5 268 159-474 9-287 (298)
39 3g2f_A Bone morphogenetic prot 100.0 4.3E-40 1.5E-44 360.9 16.7 287 159-475 12-323 (336)
40 2izr_A Casein kinase I isoform 100.0 1.8E-39 6.2E-44 356.4 21.5 266 159-473 8-284 (330)
41 1luf_A Muscle-specific tyrosin 100.0 2.6E-40 8.8E-45 363.3 14.2 274 156-472 43-337 (343)
42 3fe3_A MAP/microtubule affinit 100.0 3.8E-40 1.3E-44 363.7 15.6 249 158-463 13-264 (328)
43 4hcu_A Tyrosine-protein kinase 100.0 1.1E-39 3.6E-44 347.0 18.0 258 159-471 9-267 (269)
44 3l9p_A Anaplastic lymphoma kin 100.0 4.2E-40 1.4E-44 368.4 15.7 268 159-472 70-347 (367)
45 4eqm_A Protein kinase; transfe 100.0 2.2E-39 7.4E-44 350.7 19.6 260 159-468 10-273 (294)
46 3zgw_A Maternal embryonic leuc 100.0 8.5E-40 2.9E-44 364.2 16.8 252 158-464 8-261 (347)
47 2qol_A Ephrin receptor; recept 100.0 5.3E-40 1.8E-44 368.7 15.3 261 160-472 45-311 (373)
48 3kex_A Receptor tyrosine-prote 100.0 1.3E-39 4.5E-44 357.1 17.5 258 160-470 13-276 (325)
49 3qup_A Tyrosine-protein kinase 100.0 9.4E-40 3.2E-44 356.6 16.1 275 156-472 19-300 (323)
50 4hgt_A Casein kinase I isoform 100.0 7.2E-39 2.5E-43 343.7 22.6 269 158-473 7-283 (296)
51 2zv2_A Calcium/calmodulin-depe 100.0 3.6E-39 1.2E-43 348.3 20.3 252 159-463 12-292 (298)
52 2yab_A Death-associated protei 100.0 4.5E-39 1.5E-43 360.2 21.6 253 158-463 10-272 (361)
53 4f0f_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 344.5 21.1 254 159-468 18-287 (287)
54 2y0a_A Death-associated protei 100.0 4.9E-39 1.7E-43 353.6 21.1 252 159-463 10-271 (326)
55 3og7_A AKAP9-BRAF fusion prote 100.0 1.4E-39 4.8E-44 350.4 16.4 260 159-469 23-287 (289)
56 1t46_A HOMO sapiens V-KIT hard 100.0 1.6E-39 5.4E-44 352.0 16.8 272 159-472 22-309 (313)
57 2ivs_A Proto-oncogene tyrosine 100.0 1E-39 3.6E-44 353.6 15.3 270 159-471 22-312 (314)
58 4euu_A Serine/threonine-protei 100.0 5.9E-39 2E-43 350.4 21.4 283 159-467 8-306 (319)
59 2xir_A Vascular endothelial gr 100.0 1.3E-39 4.3E-44 353.3 15.7 282 150-472 17-312 (316)
60 1k9a_A Carboxyl-terminal SRC k 100.0 3.1E-39 1.1E-43 371.3 19.9 255 158-471 191-446 (450)
61 1rjb_A FL cytokine receptor; k 100.0 1.8E-39 6.1E-44 357.5 17.1 272 158-471 43-335 (344)
62 1tki_A Titin; serine kinase, m 100.0 2.4E-39 8.3E-44 355.7 18.1 253 159-464 4-258 (321)
63 3uzp_A CKI-delta, CKID, casein 100.0 1.6E-38 5.3E-43 341.5 24.0 270 158-474 7-284 (296)
64 3mdy_A Bone morphogenetic prot 100.0 7.5E-39 2.6E-43 350.4 21.5 282 155-471 32-332 (337)
65 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.3E-39 4.3E-44 345.8 14.8 257 159-470 7-264 (268)
66 3qd2_B Eukaryotic translation 100.0 4.1E-39 1.4E-43 350.8 19.2 258 159-463 5-325 (332)
67 3brb_A Proto-oncogene tyrosine 100.0 1.7E-39 5.9E-44 353.0 16.1 276 155-472 29-310 (313)
68 2yex_A Serine/threonine-protei 100.0 7.4E-39 2.5E-43 340.6 20.3 254 159-463 6-261 (276)
69 3tt0_A Basic fibroblast growth 100.0 6.9E-39 2.4E-43 360.0 20.7 272 159-473 68-355 (382)
70 1o6l_A RAC-beta serine/threoni 100.0 3.1E-39 1.1E-43 358.1 17.6 249 159-463 4-260 (337)
71 3g33_A Cell division protein k 100.0 5.6E-39 1.9E-43 348.5 19.2 282 158-463 7-296 (308)
72 3gen_A Tyrosine-protein kinase 100.0 4.1E-39 1.4E-43 344.6 17.8 258 159-471 23-281 (283)
73 4e5w_A Tyrosine-protein kinase 100.0 1.2E-39 4.2E-44 351.6 13.5 274 160-469 21-301 (302)
74 1opk_A P150, C-ABL, proto-onco 100.0 1.7E-39 5.8E-44 378.1 15.7 258 158-468 218-476 (495)
75 1p4o_A Insulin-like growth fac 100.0 4.9E-40 1.7E-44 358.3 10.3 275 153-470 18-299 (322)
76 3kmu_A ILK, integrin-linked ki 100.0 2.2E-39 7.6E-44 342.8 14.9 254 160-470 10-270 (271)
77 2eva_A TAK1 kinase - TAB1 chim 100.0 9.3E-39 3.2E-43 347.9 20.2 258 160-473 8-266 (307)
78 3llt_A Serine/threonine kinase 100.0 5.1E-39 1.8E-43 356.4 18.3 211 147-380 22-262 (360)
79 3o0g_A Cell division protein k 100.0 3.4E-39 1.1E-43 347.6 16.3 200 160-379 2-204 (292)
80 2buj_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 350.3 17.1 268 159-469 28-305 (317)
81 3lxl_A Tyrosine-protein kinase 100.0 9.9E-40 3.4E-44 357.8 12.2 278 160-472 23-305 (327)
82 3kfa_A Tyrosine-protein kinase 100.0 1.9E-39 6.4E-44 347.7 14.0 264 157-473 10-274 (288)
83 3pls_A Macrophage-stimulating 100.0 1.3E-38 4.3E-43 342.5 20.4 264 161-474 22-291 (298)
84 2i1m_A Macrophage colony-stimu 100.0 2.9E-39 9.8E-44 354.3 15.3 276 156-473 42-329 (333)
85 3dtc_A Mitogen-activated prote 100.0 3.7E-39 1.3E-43 342.4 15.5 251 159-468 6-271 (271)
86 3c0i_A Peripheral plasma membr 100.0 1.2E-38 4.1E-43 354.3 20.1 256 159-463 23-286 (351)
87 2v62_A Serine/threonine-protei 100.0 5.1E-39 1.8E-43 355.6 17.0 270 159-468 36-326 (345)
88 1mp8_A Focal adhesion kinase 1 100.0 3.2E-39 1.1E-43 345.9 14.8 260 159-472 14-278 (281)
89 3lxp_A Non-receptor tyrosine-p 100.0 2.2E-39 7.5E-44 354.3 13.2 275 162-474 33-314 (318)
90 3f66_A Hepatocyte growth facto 100.0 7.9E-39 2.7E-43 344.9 17.4 263 160-473 25-294 (298)
91 3gni_B Strad alpha; kinase fol 100.0 9.3E-39 3.2E-43 359.0 18.6 206 159-380 24-240 (389)
92 2pmi_A Negative RE, cyclin-dep 100.0 1.8E-38 6E-43 347.3 20.2 207 159-380 4-212 (317)
93 3hko_A Calcium/calmodulin-depe 100.0 8.9E-39 3E-43 351.7 17.9 269 155-463 21-330 (345)
94 4fvq_A Tyrosine-protein kinase 100.0 2.5E-39 8.6E-44 346.9 13.1 253 159-470 7-275 (289)
95 2a19_B Interferon-induced, dou 100.0 5.4E-39 1.9E-43 342.6 15.4 256 159-472 10-276 (284)
96 1qcf_A Haematopoetic cell kina 100.0 2.7E-39 9.2E-44 372.1 14.0 260 155-469 183-443 (454)
97 3ork_A Serine/threonine protei 100.0 2.1E-39 7.2E-44 353.0 12.3 264 159-468 11-279 (311)
98 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.4E-38 8.3E-43 352.6 21.1 260 157-472 62-341 (365)
99 3niz_A Rhodanese family protei 100.0 1.8E-38 6.1E-43 346.6 19.6 276 158-463 19-300 (311)
100 3p1a_A MYT1 kinase, membrane-a 100.0 7E-39 2.4E-43 349.5 16.3 245 160-463 57-304 (311)
101 2wqm_A Serine/threonine-protei 100.0 1.6E-38 5.5E-43 344.8 19.0 270 159-476 31-303 (310)
102 3ll6_A Cyclin G-associated kin 100.0 2E-38 6.8E-43 346.2 19.7 266 159-473 27-311 (337)
103 3lzb_A Epidermal growth factor 100.0 6.1E-39 2.1E-43 352.9 15.8 260 159-471 14-279 (327)
104 2w4o_A Calcium/calmodulin-depe 100.0 1.1E-38 3.8E-43 354.5 17.9 252 158-463 51-305 (349)
105 2jii_A Serine/threonine-protei 100.0 6.1E-39 2.1E-43 355.7 15.7 268 160-473 42-339 (352)
106 3t9t_A Tyrosine-protein kinase 100.0 1.2E-38 4E-43 337.4 16.9 257 159-470 7-264 (267)
107 2bdw_A Hypothetical protein K1 100.0 1.9E-38 6.3E-43 354.8 19.4 253 159-464 28-285 (362)
108 3f3z_A Calcium/calmodulin-depe 100.0 2.7E-38 9.3E-43 337.2 19.8 252 158-463 7-261 (277)
109 2w1i_A JAK2; chromosomal rearr 100.0 9.3E-39 3.2E-43 350.2 16.5 278 159-472 40-324 (326)
110 2pvf_A Fibroblast growth facto 100.0 1.5E-38 5E-43 349.8 18.1 272 159-473 34-321 (334)
111 1b6c_B TGF-B superfamily recep 100.0 2.8E-38 9.5E-43 347.0 20.1 280 152-472 34-338 (342)
112 3rp9_A Mitogen-activated prote 100.0 1.8E-38 6E-43 364.9 19.1 201 159-373 52-280 (458)
113 4agu_A Cyclin-dependent kinase 100.0 2.1E-38 7.1E-43 343.8 18.5 277 160-463 3-284 (311)
114 3txo_A PKC-L, NPKC-ETA, protei 100.0 3E-39 1E-43 360.4 12.1 244 159-458 22-269 (353)
115 3gxj_A TGF-beta receptor type- 100.0 2.4E-40 8.2E-45 356.4 2.9 270 159-469 2-296 (303)
116 2a2a_A Death-associated protei 100.0 3.2E-38 1.1E-42 345.2 19.9 252 159-463 11-272 (321)
117 1kob_A Twitchin; kinase, intra 100.0 1.3E-38 4.6E-43 359.6 17.2 253 159-463 50-304 (387)
118 1t4h_A Serine/threonine-protei 100.0 5E-38 1.7E-42 337.7 20.5 251 161-463 27-282 (290)
119 1fot_A TPK1 delta, CAMP-depend 100.0 1.7E-38 5.9E-43 349.0 16.9 246 159-463 5-258 (318)
120 3nsz_A CK II alpha, casein kin 100.0 8.2E-38 2.8E-42 341.9 22.0 280 159-463 35-319 (330)
121 3uc3_A Serine/threonine-protei 100.0 1.5E-38 5E-43 355.3 16.3 254 159-464 19-275 (361)
122 1qpc_A LCK kinase; alpha beta 100.0 2.1E-38 7.2E-43 338.4 16.8 261 158-473 11-272 (279)
123 3c1x_A Hepatocyte growth facto 100.0 1.2E-38 4E-43 358.1 15.5 262 161-473 90-358 (373)
124 3oz6_A Mitogen-activated prote 100.0 2.2E-38 7.6E-43 356.1 17.8 205 158-380 7-234 (388)
125 2x4f_A Myosin light chain kina 100.0 1.2E-38 4.1E-43 357.9 15.5 247 165-463 94-342 (373)
126 3cc6_A Protein tyrosine kinase 100.0 1.9E-38 6.3E-43 339.5 16.2 261 158-472 10-275 (281)
127 3i6u_A CDS1, serine/threonine- 100.0 7.9E-38 2.7E-42 356.4 22.2 253 158-463 133-399 (419)
128 3dbq_A Dual specificity protei 100.0 1.3E-38 4.6E-43 352.0 15.3 253 159-465 8-275 (343)
129 2yfx_A Tyrosine-protein kinase 100.0 1.9E-38 6.3E-43 347.7 16.2 267 159-471 29-305 (327)
130 2ac3_A MAP kinase-interacting 100.0 1.5E-38 5.1E-43 345.7 15.3 268 160-463 12-295 (316)
131 4dc2_A Protein kinase C IOTA t 100.0 3.5E-38 1.2E-42 357.4 18.9 201 159-379 51-255 (396)
132 4fr4_A YANK1, serine/threonine 100.0 4E-38 1.4E-42 355.5 19.3 249 160-462 15-270 (384)
133 3soa_A Calcium/calmodulin-depe 100.0 2.6E-38 8.8E-43 363.6 18.0 254 158-463 9-267 (444)
134 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.9E-39 2.7E-43 368.1 13.7 258 157-469 181-439 (452)
135 1mqb_A Ephrin type-A receptor 100.0 3.3E-38 1.1E-42 347.7 18.1 262 160-473 44-312 (333)
136 1ob3_A PFPK5, cell division co 100.0 1.8E-38 6.2E-43 341.5 15.4 200 160-380 2-204 (288)
137 3fdn_A Serine/threonine-protei 100.0 1.8E-38 6.2E-43 339.3 15.0 249 158-464 7-258 (279)
138 3kk8_A Calcium/calmodulin depe 100.0 5E-38 1.7E-42 336.0 18.4 252 159-463 5-261 (284)
139 2eue_A Carbon catabolite derep 100.0 1.6E-38 5.6E-43 338.9 14.5 246 160-463 13-262 (275)
140 3pg1_A Mitogen-activated prote 100.0 8.4E-38 2.9E-42 346.9 20.8 292 151-463 13-316 (362)
141 1xjd_A Protein kinase C, theta 100.0 9.2E-39 3.2E-43 355.5 13.0 249 157-461 14-267 (345)
142 3ttj_A Mitogen-activated prote 100.0 1.4E-37 4.9E-42 359.2 23.1 204 158-380 60-266 (464)
143 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.4E-38 4.9E-43 352.7 13.7 248 159-464 8-259 (336)
144 3kn6_A Ribosomal protein S6 ki 100.0 2.1E-38 7.2E-43 348.6 14.7 250 165-462 16-269 (325)
145 4eut_A Serine/threonine-protei 100.0 1.5E-38 5.3E-43 359.1 13.9 287 159-471 8-310 (396)
146 3bhy_A Death-associated protei 100.0 5.8E-38 2E-42 335.3 17.7 257 160-469 5-273 (283)
147 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.2E-38 7.6E-43 352.9 15.0 245 160-463 41-293 (350)
148 4aw2_A Serine/threonine-protei 100.0 2.3E-38 7.9E-43 363.3 15.5 211 151-379 65-283 (437)
149 3v8s_A RHO-associated protein 100.0 1.5E-38 5.2E-43 361.9 13.8 260 152-463 61-329 (410)
150 3is5_A Calcium-dependent prote 100.0 5.3E-38 1.8E-42 337.7 17.3 254 159-463 21-278 (285)
151 1byg_A CSK, protein (C-termina 100.0 1.9E-38 6.6E-43 338.9 13.6 255 159-472 20-275 (278)
152 3n9x_A Phosphotransferase; mal 100.0 1.1E-37 3.8E-42 356.4 20.8 206 159-378 25-253 (432)
153 3qyz_A Mitogen-activated prote 100.0 9.3E-38 3.2E-42 348.1 19.7 287 157-463 24-313 (364)
154 1nxk_A MAP kinase-activated pr 100.0 7.7E-38 2.6E-42 354.5 19.2 259 159-465 60-323 (400)
155 3dls_A PAS domain-containing s 100.0 3.2E-38 1.1E-42 348.9 15.7 243 158-463 22-274 (335)
156 1xbb_A Tyrosine-protein kinase 100.0 2.2E-38 7.5E-43 341.0 13.8 263 157-473 13-282 (291)
157 2zmd_A Dual specificity protei 100.0 4.9E-38 1.7E-42 354.8 17.3 251 160-464 56-321 (390)
158 3a8x_A Protein kinase C IOTA t 100.0 5.3E-38 1.8E-42 349.0 17.2 200 160-379 9-212 (345)
159 4ejn_A RAC-alpha serine/threon 100.0 9.1E-39 3.1E-43 366.5 11.0 249 159-463 147-404 (446)
160 3a62_A Ribosomal protein S6 ki 100.0 3.7E-38 1.3E-42 346.7 15.3 201 159-379 16-223 (327)
161 3cok_A Serine/threonine-protei 100.0 6.4E-38 2.2E-42 334.5 16.7 250 159-463 10-262 (278)
162 2h34_A Serine/threonine-protei 100.0 7.7E-38 2.6E-42 340.7 17.6 259 159-469 33-295 (309)
163 1u59_A Tyrosine-protein kinase 100.0 7.3E-38 2.5E-42 336.3 17.0 262 160-474 9-276 (287)
164 2w5a_A Serine/threonine-protei 100.0 2.6E-38 9.1E-43 337.2 13.4 259 159-466 5-270 (279)
165 2i0e_A Protein kinase C-beta I 100.0 3.5E-38 1.2E-42 351.9 14.5 201 159-379 19-223 (353)
166 2jam_A Calcium/calmodulin-depe 100.0 1.5E-37 5E-42 336.7 19.0 251 159-463 8-261 (304)
167 2clq_A Mitogen-activated prote 100.0 1.1E-37 3.9E-42 334.6 17.7 253 161-463 23-278 (295)
168 1fvr_A Tyrosine-protein kinase 100.0 7E-38 2.4E-42 343.1 16.2 267 160-472 25-302 (327)
169 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.7E-38 2.3E-42 344.4 16.1 203 157-380 31-241 (329)
170 3mtl_A Cell division protein k 100.0 2.8E-38 9.4E-43 346.8 12.8 273 160-463 2-281 (324)
171 3sv0_A Casein kinase I-like; t 100.0 3.7E-37 1.3E-41 357.5 23.0 268 159-473 6-281 (483)
172 2wtk_C Serine/threonine-protei 100.0 1.1E-37 3.7E-42 336.8 17.3 255 159-464 4-264 (305)
173 2ozo_A Tyrosine-protein kinase 100.0 9.7E-38 3.3E-42 372.6 18.3 259 162-473 337-601 (613)
174 3eqc_A Dual specificity mitoge 100.0 3.3E-38 1.1E-42 350.3 13.1 200 159-380 32-233 (360)
175 2y94_A 5'-AMP-activated protei 100.0 2E-37 6.7E-42 359.3 20.2 248 159-463 15-266 (476)
176 2vd5_A DMPK protein; serine/th 100.0 3.6E-38 1.2E-42 359.1 13.5 211 151-379 52-272 (412)
177 3lm5_A Serine/threonine-protei 100.0 9.8E-38 3.4E-42 342.8 16.4 262 151-463 19-287 (327)
178 1x8b_A WEE1HU, WEE1-like prote 100.0 1.1E-37 3.9E-42 331.9 16.3 247 159-463 10-279 (289)
179 2x7f_A TRAF2 and NCK-interacti 100.0 6.1E-38 2.1E-42 342.3 14.6 267 149-463 13-286 (326)
180 1wak_A Serine/threonine-protei 100.0 3.1E-37 1.1E-41 344.8 20.6 203 159-380 36-296 (397)
181 2vgo_A Serine/threonine-protei 100.0 1.7E-37 5.9E-42 332.5 17.7 247 159-463 13-262 (284)
182 3a7i_A MST3 kinase, serine/thr 100.0 2.5E-37 8.5E-42 334.4 19.0 252 159-466 21-273 (303)
183 4aaa_A Cyclin-dependent kinase 100.0 9.3E-38 3.2E-42 343.0 15.9 275 159-463 24-306 (331)
184 2j7t_A Serine/threonine-protei 100.0 1E-37 3.4E-42 336.6 15.7 254 158-463 17-275 (302)
185 2h8h_A Proto-oncogene tyrosine 100.0 2.9E-38 1E-42 371.2 12.4 257 157-468 264-521 (535)
186 1u5q_A Serine/threonine protei 100.0 6.7E-38 2.3E-42 348.4 14.3 248 160-465 54-307 (348)
187 3byv_A Rhoptry kinase; malaria 100.0 1.4E-38 4.9E-43 356.5 9.0 261 159-472 72-370 (377)
188 2i6l_A Mitogen-activated prote 100.0 2E-37 6.9E-42 335.7 17.6 281 159-463 10-305 (320)
189 4fl3_A Tyrosine-protein kinase 100.0 8E-38 2.8E-42 374.7 15.8 253 166-472 375-633 (635)
190 3eb0_A Putative uncharacterize 100.0 2.4E-37 8.3E-42 347.3 18.8 291 156-470 3-330 (383)
191 3fme_A Dual specificity mitoge 100.0 7.6E-38 2.6E-42 335.1 14.0 254 159-463 6-266 (290)
192 2rku_A Serine/threonine-protei 100.0 1.1E-37 3.9E-42 335.6 15.4 250 159-464 14-266 (294)
193 2h6d_A 5'-AMP-activated protei 100.0 1.3E-37 4.5E-42 331.3 15.6 249 159-464 10-262 (276)
194 2ycf_A Serine/threonine-protei 100.0 3E-37 1E-41 337.3 18.6 252 159-463 9-274 (322)
195 2vwi_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 339.2 11.2 270 158-463 13-287 (303)
196 1ua2_A CAK, cell division prot 100.0 2.3E-37 7.8E-42 342.5 17.5 277 157-464 7-292 (346)
197 3mi9_A Cell division protein k 100.0 4.8E-37 1.6E-41 339.8 20.0 209 159-380 16-232 (351)
198 1cm8_A Phosphorylated MAP kina 100.0 2.2E-37 7.7E-42 346.5 17.4 280 159-463 24-307 (367)
199 1blx_A Cyclin-dependent kinase 100.0 4.7E-37 1.6E-41 334.9 19.5 209 157-380 8-222 (326)
200 2qr7_A Ribosomal protein S6 ki 100.0 1.5E-37 5E-42 345.0 15.7 254 158-464 20-278 (342)
201 2y7j_A Phosphorylase B kinase 100.0 7.9E-37 2.7E-41 341.6 21.5 258 153-463 87-359 (365)
202 2owb_A Serine/threonine-protei 100.0 8.3E-38 2.9E-42 344.5 13.3 250 159-464 40-292 (335)
203 3an0_A Dual specificity mitoge 100.0 1.6E-37 5.4E-42 341.8 15.3 255 158-463 49-310 (340)
204 3com_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41 333.6 18.8 252 158-463 27-278 (314)
205 2b9h_A MAP kinase FUS3, mitoge 100.0 2.3E-37 7.9E-42 341.5 16.6 287 158-463 9-305 (353)
206 2r5t_A Serine/threonine-protei 100.0 8.3E-38 2.9E-42 351.5 13.2 248 159-462 37-288 (373)
207 3e3p_A Protein kinase, putativ 100.0 5.7E-37 1.9E-41 339.3 19.3 293 153-463 16-314 (360)
208 2xrw_A Mitogen-activated prote 100.0 1.4E-36 4.7E-41 340.0 22.6 203 159-380 24-229 (371)
209 2r3i_A Cell division protein k 100.0 7E-37 2.4E-41 329.5 19.5 202 160-380 3-207 (299)
210 2fst_X Mitogen-activated prote 100.0 2.4E-37 8.3E-42 346.5 16.5 281 158-463 27-311 (367)
211 1u46_A ACK-1, activated CDC42 100.0 5.3E-38 1.8E-42 336.5 10.2 259 159-469 17-283 (291)
212 1phk_A Phosphorylase kinase; g 100.0 3.7E-37 1.3E-41 331.5 16.5 253 158-463 15-283 (298)
213 1vzo_A Ribosomal protein S6 ki 100.0 1.4E-37 4.7E-42 346.2 13.1 256 159-465 53-323 (355)
214 2acx_A G protein-coupled recep 100.0 2.5E-37 8.7E-42 364.9 15.9 204 158-380 182-388 (576)
215 3q60_A ROP5B; pseudokinase, tr 100.0 9.9E-38 3.4E-42 348.7 11.6 267 159-470 61-361 (371)
216 3nyv_A Calmodulin-domain prote 100.0 4.2E-37 1.4E-41 355.9 17.2 252 159-464 25-282 (484)
217 1z57_A Dual specificity protei 100.0 1.5E-36 5E-41 331.2 20.5 199 159-380 13-237 (339)
218 3mwu_A Calmodulin-domain prote 100.0 5.6E-37 1.9E-41 355.4 18.2 252 159-464 21-277 (486)
219 3q5i_A Protein kinase; CDPK, m 100.0 7.9E-37 2.7E-41 355.9 19.4 252 158-463 34-301 (504)
220 2pml_X PFPK7, Ser/Thr protein 100.0 5.1E-37 1.7E-41 338.1 16.7 270 159-463 30-322 (348)
221 3lij_A Calcium/calmodulin depe 100.0 5.3E-37 1.8E-41 356.5 17.0 252 159-464 36-292 (494)
222 3kvw_A DYRK2, dual specificity 100.0 1.4E-36 4.8E-41 347.2 19.5 199 159-380 96-302 (429)
223 3cek_A Dual specificity protei 100.0 3E-37 1E-41 335.7 13.0 261 150-464 18-293 (313)
224 1zy4_A Serine/threonine-protei 100.0 7.5E-37 2.5E-41 328.2 15.8 258 159-463 5-283 (303)
225 4exu_A Mitogen-activated prote 100.0 1.7E-36 5.9E-41 339.1 19.4 280 158-463 40-323 (371)
226 3c4z_A Rhodopsin kinase; Ser/T 100.0 7E-37 2.4E-41 359.6 16.8 206 159-380 184-392 (543)
227 3pfq_A PKC-B, PKC-beta, protei 100.0 5.1E-37 1.7E-41 370.2 15.8 245 158-458 339-587 (674)
228 1j1b_A Glycogen synthase kinas 100.0 1.9E-36 6.4E-41 345.2 19.5 277 160-463 54-336 (420)
229 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.6E-37 8.9E-42 335.9 11.3 260 158-472 31-304 (319)
230 1q8y_A SR protein kinase; tran 100.0 1.9E-36 6.4E-41 336.4 18.1 203 159-380 18-238 (373)
231 2vx3_A Dual specificity tyrosi 100.0 3.3E-36 1.1E-40 337.9 19.9 207 153-380 47-261 (382)
232 2eu9_A Dual specificity protei 100.0 6.3E-36 2.1E-40 328.7 21.0 199 159-380 18-242 (355)
233 2wei_A Calmodulin-domain prote 100.0 2.2E-36 7.5E-41 324.8 15.9 251 159-463 21-276 (287)
234 3fhr_A MAP kinase-activated pr 100.0 4.1E-36 1.4E-40 331.6 17.9 258 158-464 26-288 (336)
235 3coi_A Mitogen-activated prote 100.0 4.5E-36 1.5E-40 332.5 17.9 279 159-463 23-305 (353)
236 3rgf_A Cyclin-dependent kinase 100.0 4.6E-36 1.6E-40 339.4 17.9 210 161-380 21-239 (405)
237 4e7w_A Glycogen synthase kinas 100.0 3.8E-36 1.3E-40 339.7 17.0 276 160-463 40-321 (394)
238 3aln_A Dual specificity mitoge 100.0 1.6E-36 5.6E-41 331.9 12.7 259 159-464 21-286 (327)
239 2j0j_A Focal adhesion kinase 1 100.0 3.2E-36 1.1E-40 362.2 15.9 260 158-471 388-652 (656)
240 2iwi_A Serine/threonine-protei 100.0 2.4E-36 8.2E-41 328.0 13.4 245 155-463 26-283 (312)
241 3a99_A Proto-oncogene serine/t 100.0 2.4E-36 8.2E-41 330.8 12.7 246 154-463 37-293 (320)
242 2dyl_A Dual specificity mitoge 100.0 1.3E-35 4.4E-40 322.1 15.0 252 159-463 24-283 (318)
243 2rio_A Serine/threonine-protei 100.0 3.4E-35 1.1E-39 336.2 15.7 256 161-463 16-295 (434)
244 3uqc_A Probable conserved tran 100.0 1.8E-34 6.1E-39 312.1 18.1 234 160-472 31-267 (286)
245 2pzi_A Probable serine/threoni 100.0 1.2E-34 4.2E-39 349.7 17.6 249 159-472 79-330 (681)
246 3p23_A Serine/threonine-protei 100.0 9.7E-35 3.3E-39 332.6 15.4 250 159-463 23-283 (432)
247 3dzo_A Rhoptry kinase domain; 100.0 3.6E-35 1.2E-39 333.9 11.7 261 159-472 77-374 (413)
248 3qa8_A MGC80376 protein; kinas 100.0 7.2E-35 2.5E-39 348.1 12.1 283 160-468 14-307 (676)
249 3m2w_A MAP kinase-activated pr 100.0 6.9E-34 2.4E-38 307.7 18.7 237 159-464 16-257 (299)
250 2vuw_A Serine/threonine-protei 100.0 3.3E-33 1.1E-37 307.4 12.3 198 159-379 19-279 (336)
251 4azs_A Methyltransferase WBDD; 99.9 1.5E-27 5E-32 282.3 3.4 186 167-376 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 1.6E-24 5.6E-29 254.8 7.4 185 163-377 339-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 4.9E-22 1.7E-26 214.7 8.5 153 152-350 82-252 (282)
254 1zth_A RIO1 serine protein kin 99.7 9.7E-18 3.3E-22 178.4 14.1 138 162-325 49-219 (258)
255 4gyi_A RIO2 kinase; protein ki 99.6 3.6E-15 1.2E-19 167.5 10.6 145 160-324 95-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp 99.2 3.8E-11 1.3E-15 126.6 12.4 148 155-324 9-213 (263)
257 1nd4_A Aminoglycoside 3'-phosp 99.1 2.7E-10 9.4E-15 118.8 10.7 139 159-324 19-214 (264)
258 3rgz_A Protein brassinosteroid 99.1 8E-11 2.7E-15 143.7 6.1 84 1-84 639-722 (768)
259 3rgz_A Protein brassinosteroid 99.0 1.9E-10 6.6E-15 140.4 5.2 82 1-82 663-744 (768)
260 3dxp_A Putative acyl-COA dehyd 98.9 6.3E-09 2.2E-13 115.0 11.4 146 164-325 42-249 (359)
261 1w8a_A SLIT protein; signaling 98.8 2.6E-09 8.8E-14 107.9 6.7 84 1-84 36-120 (192)
262 3g39_A Variable lymphocyte rec 98.8 4.3E-09 1.5E-13 104.3 8.1 79 1-82 16-94 (170)
263 2r9u_A Variable lymphocyte rec 98.8 6.9E-09 2.3E-13 103.4 8.2 80 1-83 19-98 (174)
264 3oja_A Leucine-rich immune mol 98.8 2.7E-10 9.2E-15 132.0 -3.8 82 1-84 127-209 (487)
265 1w8a_A SLIT protein; signaling 98.7 7.1E-09 2.4E-13 104.7 6.3 80 1-83 15-95 (192)
266 2v70_A SLIT-2, SLIT homolog 2 98.7 1.5E-08 5.2E-13 104.5 8.0 83 1-83 39-122 (220)
267 2wfh_A SLIT homolog 2 protein 98.7 1.3E-08 4.5E-13 103.0 7.3 81 1-82 38-118 (193)
268 3sg8_A APH(2'')-ID; antibiotic 98.7 3E-09 1E-13 115.0 2.3 190 165-377 25-287 (304)
269 2ifg_A High affinity nerve gro 98.7 1.7E-08 6E-13 110.7 7.6 81 2-84 16-98 (347)
270 2ifg_A High affinity nerve gro 98.7 1.4E-08 4.7E-13 111.5 6.7 79 1-80 38-117 (347)
271 2v70_A SLIT-2, SLIT homolog 2 98.7 2.1E-08 7.3E-13 103.5 6.8 84 1-84 64-147 (220)
272 2r9u_A Variable lymphocyte rec 98.7 3.5E-08 1.2E-12 98.3 8.1 82 1-82 40-121 (174)
273 3g39_A Variable lymphocyte rec 98.7 3.6E-08 1.2E-12 97.6 8.1 82 1-82 37-118 (170)
274 2v9t_B SLIT homolog 2 protein 98.7 3.3E-08 1.1E-12 102.0 8.0 84 1-84 39-122 (220)
275 2o6r_A Variable lymphocyte rec 98.6 5.1E-08 1.7E-12 96.5 8.5 83 1-83 35-117 (177)
276 1ogq_A PGIP-2, polygalacturona 98.6 6.3E-09 2.2E-13 113.1 1.9 84 1-84 57-143 (313)
277 1ogq_A PGIP-2, polygalacturona 98.6 7.5E-09 2.6E-13 112.6 2.4 82 3-84 86-167 (313)
278 2wfh_A SLIT homolog 2 protein 98.6 4.4E-08 1.5E-12 99.1 7.5 80 1-80 61-140 (193)
279 2v9t_B SLIT homolog 2 protein 98.6 4.6E-08 1.6E-12 100.9 7.5 79 2-83 19-97 (220)
280 1dce_A Protein (RAB geranylger 98.6 4E-08 1.4E-12 116.0 7.5 77 1-82 448-524 (567)
281 2o6r_A Variable lymphocyte rec 98.6 5.4E-08 1.9E-12 96.3 7.2 83 1-83 59-141 (177)
282 3e6j_A Variable lymphocyte rec 98.6 8.3E-08 2.8E-12 99.6 8.5 79 1-79 47-125 (229)
283 3m19_A Variable lymphocyte rec 98.6 1E-07 3.6E-12 99.8 8.5 83 1-83 42-124 (251)
284 2je0_A Acidic leucine-rich nuc 98.5 6.8E-08 2.3E-12 92.7 6.3 79 1-81 24-103 (149)
285 4fcg_A Uncharacterized protein 98.5 6.9E-08 2.3E-12 105.8 6.6 80 2-83 191-270 (328)
286 3m19_A Variable lymphocyte rec 98.5 1.3E-07 4.5E-12 99.1 8.3 83 1-83 66-148 (251)
287 3e6j_A Variable lymphocyte rec 98.5 1.8E-07 6.1E-12 97.0 8.6 82 1-83 71-152 (229)
288 2o6s_A Variable lymphocyte rec 98.5 1.8E-07 6.3E-12 94.9 8.5 83 1-83 35-117 (208)
289 2o6s_A Variable lymphocyte rec 98.5 2E-07 6.8E-12 94.6 8.6 83 1-83 59-141 (208)
290 2je0_A Acidic leucine-rich nuc 98.5 7.6E-08 2.6E-12 92.4 4.9 80 1-82 49-129 (149)
291 4eco_A Uncharacterized protein 98.5 5.5E-08 1.9E-12 116.2 4.3 83 1-84 88-267 (636)
292 4b8c_D Glucose-repressible alc 98.5 7.1E-08 2.4E-12 117.2 4.8 79 1-82 231-309 (727)
293 3rfs_A Internalin B, repeat mo 98.5 2.5E-07 8.7E-12 98.2 8.6 84 1-84 116-199 (272)
294 4g8a_A TOLL-like receptor 4; l 98.5 1.6E-07 5.5E-12 110.2 7.5 84 1-84 476-560 (635)
295 3rfs_A Internalin B, repeat mo 98.4 2.7E-07 9.4E-12 97.9 8.5 84 1-84 92-175 (272)
296 2ell_A Acidic leucine-rich nuc 98.4 1E-07 3.5E-12 93.4 4.6 79 1-81 31-110 (168)
297 4g8a_A TOLL-like receptor 4; l 98.4 1.5E-07 5.1E-12 110.5 6.6 83 1-83 59-141 (635)
298 1dce_A Protein (RAB geranylger 98.4 1.7E-07 6E-12 110.5 7.1 81 1-84 470-551 (567)
299 4fcg_A Uncharacterized protein 98.4 2.5E-07 8.5E-12 101.3 7.7 83 1-84 213-295 (328)
300 2xot_A Amphoterin-induced prot 98.4 2.3E-07 7.8E-12 102.9 6.5 82 1-82 46-128 (361)
301 1p9a_G Platelet glycoprotein I 98.4 4.2E-07 1.4E-11 97.8 8.4 80 1-83 62-141 (290)
302 4ecn_A Leucine-rich repeat pro 98.4 9.6E-08 3.3E-12 118.0 3.4 84 1-84 330-509 (876)
303 4eco_A Uncharacterized protein 98.4 1.1E-07 3.9E-12 113.4 3.8 77 3-80 192-288 (636)
304 2ell_A Acidic leucine-rich nuc 98.4 2.6E-07 8.8E-12 90.5 5.3 81 1-83 56-137 (168)
305 1p9a_G Platelet glycoprotein I 98.4 6E-07 2.1E-11 96.6 8.5 82 1-83 84-165 (290)
306 3v47_A TOLL-like receptor 5B a 98.4 3.6E-07 1.2E-11 103.5 7.1 83 1-83 282-364 (455)
307 3r70_A Aminoglycoside phosphot 98.4 1.2E-06 4.1E-11 95.4 10.8 137 161-325 38-238 (320)
308 2z66_A Variable lymphocyte rec 98.3 4.2E-07 1.4E-11 97.7 6.8 82 1-82 133-215 (306)
309 3v47_A TOLL-like receptor 5B a 98.3 3.9E-07 1.3E-11 103.2 6.9 83 1-83 306-388 (455)
310 4ezg_A Putative uncharacterize 98.3 4E-07 1.4E-11 91.8 6.0 66 12-77 82-147 (197)
311 2xot_A Amphoterin-induced prot 98.3 3.8E-07 1.3E-11 101.0 6.0 76 2-80 26-102 (361)
312 4b8c_D Glucose-repressible alc 98.3 4.9E-07 1.7E-11 109.8 6.6 70 9-80 215-284 (727)
313 2o6q_A Variable lymphocyte rec 98.3 1.1E-06 3.6E-11 93.1 8.5 83 1-83 92-174 (270)
314 1wwl_A Monocyte differentiatio 98.3 2.1E-07 7.3E-12 100.8 2.9 81 1-82 70-165 (312)
315 2z66_A Variable lymphocyte rec 98.3 8.5E-07 2.9E-11 95.2 7.2 84 1-84 157-241 (306)
316 4ecn_A Leucine-rich repeat pro 98.3 2.8E-07 9.6E-12 113.9 3.8 77 3-80 434-530 (876)
317 3zyi_A Leucine-rich repeat-con 98.3 6.6E-07 2.3E-11 101.9 6.4 80 1-80 82-161 (452)
318 1ozn_A Reticulon 4 receptor; N 98.3 9.1E-07 3.1E-11 94.1 6.9 83 1-83 87-170 (285)
319 2o6q_A Variable lymphocyte rec 98.3 1.5E-06 5.1E-11 92.0 8.5 83 1-83 68-150 (270)
320 1ozn_A Reticulon 4 receptor; N 98.2 1.4E-06 4.8E-11 92.6 7.9 83 1-83 39-122 (285)
321 2z63_A TOLL-like receptor 4, v 98.2 9.6E-07 3.3E-11 102.8 7.0 84 1-84 428-512 (570)
322 2z62_A TOLL-like receptor 4, v 98.2 1E-06 3.6E-11 93.2 6.5 82 1-82 35-116 (276)
323 3oja_B Anopheles plasmodium-re 98.2 1.3E-06 4.3E-11 103.5 7.7 83 1-83 82-164 (597)
324 3vq2_A TLR4, TOLL-like recepto 98.2 1.2E-06 4E-11 103.2 7.4 82 1-82 39-120 (606)
325 2z81_A CD282 antigen, TOLL-lik 98.2 8.1E-07 2.8E-11 103.1 5.9 80 1-80 33-112 (549)
326 1xku_A Decorin; proteoglycan, 98.2 1.2E-06 4.2E-11 95.2 6.9 81 1-82 199-279 (330)
327 3t6q_A CD180 antigen; protein- 98.2 8.7E-07 3E-11 104.3 6.2 81 1-81 40-120 (606)
328 2ft3_A Biglycan; proteoglycan, 98.2 1.5E-06 5.1E-11 94.7 7.5 80 1-81 200-279 (332)
329 1a9n_A U2A', U2A'; complex (nu 98.2 1E-06 3.4E-11 87.2 5.5 76 1-80 26-102 (176)
330 3d1u_A Putative fructosamine-3 98.2 7.2E-06 2.5E-10 88.4 12.5 78 163-250 18-98 (288)
331 2z62_A TOLL-like receptor 4, v 98.2 1.5E-06 5.1E-11 92.0 7.0 80 1-80 59-138 (276)
332 4gkh_A Aminoglycoside 3'-phosp 98.2 9.7E-06 3.3E-10 85.3 13.2 141 161-324 26-223 (272)
333 2id5_A Lingo-1, leucine rich r 98.2 1.3E-06 4.4E-11 99.9 6.5 82 1-82 39-120 (477)
334 3vq2_A TLR4, TOLL-like recepto 98.2 1.9E-06 6.4E-11 101.4 7.8 80 1-80 63-142 (606)
335 2z7x_B TOLL-like receptor 1, v 98.2 1.2E-06 4E-11 101.3 5.9 82 1-82 331-415 (520)
336 3zyj_A Leucine-rich repeat-con 98.2 1.6E-06 5.4E-11 98.4 6.8 80 1-80 71-150 (440)
337 2z80_A TOLL-like receptor 2, v 98.2 1.6E-06 5.5E-11 95.3 6.3 80 1-80 59-138 (353)
338 3oja_B Anopheles plasmodium-re 98.1 2.2E-06 7.5E-11 101.4 7.7 81 1-81 106-186 (597)
339 3zyj_A Leucine-rich repeat-con 98.1 1.7E-06 5.8E-11 98.2 6.4 82 1-84 192-273 (440)
340 3tdw_A Gentamicin resistance p 98.1 8.5E-06 2.9E-10 88.3 11.5 137 165-324 24-224 (306)
341 2z63_A TOLL-like receptor 4, v 98.1 1.5E-06 5.3E-11 101.0 6.0 83 1-83 403-487 (570)
342 3zyi_A Leucine-rich repeat-con 98.1 1.6E-06 5.6E-11 98.7 6.0 82 1-84 203-284 (452)
343 3t6q_A CD180 antigen; protein- 98.1 2.4E-06 8.2E-11 100.5 7.1 81 1-81 64-144 (606)
344 3o6n_A APL1; leucine-rich repe 98.1 3.3E-06 1.1E-10 94.0 7.7 81 1-81 76-156 (390)
345 2id5_A Lingo-1, leucine rich r 98.1 2.1E-06 7E-11 98.2 6.2 82 1-82 63-144 (477)
346 1wwl_A Monocyte differentiatio 98.1 2.4E-06 8.3E-11 92.4 6.4 78 1-81 208-289 (312)
347 2ft3_A Biglycan; proteoglycan, 98.1 3.3E-06 1.1E-10 91.9 7.4 79 1-82 61-139 (332)
348 2z81_A CD282 antigen, TOLL-lik 98.1 2.1E-06 7.3E-11 99.6 6.0 82 1-82 57-139 (549)
349 4glp_A Monocyte differentiatio 98.1 1.5E-06 5.1E-11 93.9 4.2 80 1-80 98-183 (310)
350 1xku_A Decorin; proteoglycan, 98.1 3.6E-06 1.2E-10 91.4 7.1 77 1-80 59-135 (330)
351 2z7x_B TOLL-like receptor 1, v 98.1 2.1E-06 7E-11 99.2 5.4 78 1-81 28-105 (520)
352 3j0a_A TOLL-like receptor 5; m 98.1 2E-06 6.8E-11 106.0 5.6 81 1-81 31-112 (844)
353 3j0a_A TOLL-like receptor 5; m 98.1 3.4E-06 1.2E-10 103.9 7.3 82 1-82 55-139 (844)
354 3o6n_A APL1; leucine-rich repe 98.0 5.2E-06 1.8E-10 92.3 7.7 80 1-81 100-180 (390)
355 1ds9_A Outer arm dynein; leuci 98.0 2.9E-07 1E-11 92.9 -2.2 77 1-80 25-107 (198)
356 2xwt_C Thyrotropin receptor; s 98.0 1.7E-06 5.7E-11 89.7 3.4 81 1-81 38-120 (239)
357 4ezg_A Putative uncharacterize 98.0 2.3E-06 7.8E-11 86.2 4.2 77 1-81 51-127 (197)
358 3a79_B TLR6, VLRB.59, TOLL-lik 98.0 3.5E-06 1.2E-10 98.6 6.4 82 1-82 360-444 (562)
359 4glp_A Monocyte differentiatio 98.0 5.1E-06 1.7E-10 89.7 7.1 77 1-81 204-287 (310)
360 3a79_B TLR6, VLRB.59, TOLL-lik 98.0 3.3E-06 1.1E-10 98.8 6.1 75 2-79 39-113 (562)
361 3ovc_A Hygromycin-B 4-O-kinase 98.0 3.9E-05 1.3E-09 85.3 14.3 77 163-250 44-122 (362)
362 1a9n_A U2A', U2A'; complex (nu 98.0 3.8E-06 1.3E-10 83.0 5.0 75 1-79 49-126 (176)
363 3oja_A Leucine-rich immune mol 98.0 3E-06 1E-10 97.9 4.6 80 1-83 151-231 (487)
364 1ziw_A TOLL-like receptor 3; i 98.0 4.3E-06 1.5E-10 99.8 6.1 82 1-82 32-113 (680)
365 1ziw_A TOLL-like receptor 3; i 98.0 6.8E-06 2.3E-10 98.1 7.7 83 1-84 56-139 (680)
366 2z80_A TOLL-like receptor 2, v 98.0 6E-06 2.1E-10 90.6 6.0 80 1-80 83-164 (353)
367 3ats_A Putative uncharacterize 97.9 4E-05 1.4E-09 84.2 12.5 85 165-251 25-122 (357)
368 2olc_A MTR kinase, methylthior 97.8 3.9E-05 1.3E-09 85.7 10.3 76 165-247 35-120 (397)
369 1xeu_A Internalin C; cellular 97.8 1.9E-05 6.7E-10 83.5 7.0 73 1-80 48-120 (263)
370 3o53_A Protein LRIM1, AGAP0063 97.8 7.3E-06 2.5E-10 88.8 3.6 78 1-81 106-184 (317)
371 4fmz_A Internalin; leucine ric 97.8 1.4E-05 4.7E-10 87.1 5.3 79 1-83 250-328 (347)
372 1xeu_A Internalin C; cellular 97.8 2.1E-05 7E-10 83.3 6.0 74 1-81 92-165 (263)
373 3rw6_A Nuclear RNA export fact 97.8 4.8E-06 1.6E-10 88.9 1.0 67 15-83 167-237 (267)
374 3cvr_A Invasion plasmid antige 97.8 2.8E-05 9.5E-10 91.8 7.6 69 1-81 87-155 (571)
375 1ds9_A Outer arm dynein; leuci 97.8 6.6E-07 2.3E-11 90.3 -5.5 75 1-80 55-129 (198)
376 1h6u_A Internalin H; cell adhe 97.7 2.7E-05 9.1E-10 84.2 6.6 76 1-82 114-189 (308)
377 1h6t_A Internalin B; cell adhe 97.7 3.5E-05 1.2E-09 82.7 7.4 74 1-80 53-126 (291)
378 3o53_A Protein LRIM1, AGAP0063 97.7 2E-05 6.8E-10 85.4 5.3 79 1-82 151-230 (317)
379 2xwt_C Thyrotropin receptor; s 97.7 1.6E-05 5.5E-10 82.2 4.3 78 1-81 112-195 (239)
380 2q83_A YTAA protein; 2635576, 97.7 0.00017 5.7E-09 78.0 12.4 152 166-323 38-251 (346)
381 1h6t_A Internalin B; cell adhe 97.7 3.3E-05 1.1E-09 82.9 6.4 77 1-83 97-173 (291)
382 1h6u_A Internalin H; cell adhe 97.7 3.8E-05 1.3E-09 83.0 6.9 77 1-83 92-168 (308)
383 3cvr_A Invasion plasmid antige 97.7 1.8E-05 6.3E-10 93.3 4.6 70 1-82 147-223 (571)
384 4ay9_X Follicle-stimulating ho 97.7 1.9E-05 6.6E-10 86.8 3.9 78 2-83 17-97 (350)
385 1m9s_A Internalin B; cell inva 97.6 3.9E-05 1.3E-09 91.1 6.6 75 1-81 116-190 (605)
386 1m9s_A Internalin B; cell inva 97.6 5E-05 1.7E-09 90.3 6.6 77 1-83 94-170 (605)
387 1jl5_A Outer protein YOPM; leu 97.6 7E-05 2.4E-09 85.7 7.6 57 18-80 131-187 (454)
388 1o6v_A Internalin A; bacterial 97.6 5.3E-05 1.8E-09 86.5 6.5 77 1-83 294-370 (466)
389 3goz_A Leucine-rich repeat-con 97.6 1.3E-05 4.5E-10 88.5 1.3 82 1-82 5-96 (362)
390 4fmz_A Internalin; leucine ric 97.6 5.3E-05 1.8E-09 82.4 5.8 77 1-83 228-304 (347)
391 3g06_A SSPH2 (leucine-rich rep 97.5 7.1E-05 2.4E-09 89.2 6.9 54 18-79 221-274 (622)
392 3bz5_A Internalin-J, INLJ; leu 97.5 9.9E-05 3.4E-09 84.5 7.8 71 2-80 156-226 (457)
393 2ca6_A RAN GTPase-activating p 97.5 1E-05 3.5E-10 89.9 -0.6 80 1-80 194-288 (386)
394 1jl5_A Outer protein YOPM; leu 97.5 6.7E-05 2.3E-09 85.8 6.2 55 18-80 317-371 (454)
395 2ast_B S-phase kinase-associat 97.5 2.6E-05 8.8E-10 84.4 2.0 78 1-79 77-156 (336)
396 1o6v_A Internalin A; bacterial 97.5 0.00012 4E-09 83.6 7.2 76 1-82 228-303 (466)
397 3bz5_A Internalin-J, INLJ; leu 97.5 0.00011 3.8E-09 84.1 7.0 73 1-82 177-249 (457)
398 2ca6_A RAN GTPase-activating p 97.5 1.8E-05 6.2E-10 87.9 0.3 81 1-81 166-259 (386)
399 2ast_B S-phase kinase-associat 97.5 1.4E-05 4.8E-10 86.5 -0.8 80 1-80 100-183 (336)
400 4ay9_X Follicle-stimulating ho 97.4 5.4E-05 1.8E-09 83.2 3.7 82 1-83 37-121 (350)
401 2pyw_A Uncharacterized protein 97.4 0.00013 4.5E-09 82.3 6.5 79 293-373 231-312 (420)
402 3rw6_A Nuclear RNA export fact 97.4 6.7E-05 2.3E-09 80.1 3.3 58 1-60 177-238 (267)
403 3f7w_A Putative fructosamine-3 97.4 0.0005 1.7E-08 73.2 10.0 79 161-249 16-97 (288)
404 3goz_A Leucine-rich repeat-con 97.3 3.5E-05 1.2E-09 85.1 0.7 82 1-82 29-125 (362)
405 2ppq_A HSK, HK, homoserine kin 97.3 0.0018 6.2E-08 69.6 13.3 170 149-323 6-216 (322)
406 3g06_A SSPH2 (leucine-rich rep 97.1 0.00049 1.7E-08 82.0 6.9 70 1-81 47-116 (622)
407 3dxq_A Choline/ethanolamine ki 97.0 0.0016 5.4E-08 69.8 9.4 72 165-250 23-96 (301)
408 3jr1_A Putative fructosamine-3 97.0 0.0079 2.7E-07 65.4 14.6 76 164-249 40-118 (312)
409 1nw1_A Choline kinase (49.2 KD 96.8 0.0052 1.8E-07 69.7 11.9 74 165-249 78-159 (429)
410 1zyl_A Hypothetical protein YI 96.8 0.0072 2.5E-07 65.1 12.5 171 147-324 8-223 (328)
411 1z7x_W Ribonuclease inhibitor; 96.8 0.00012 4E-09 82.7 -2.0 80 1-80 291-384 (461)
412 2qg7_A Ethanolamine kinase PV0 96.6 0.016 5.5E-07 66.3 13.8 76 165-250 113-189 (458)
413 3feg_A Choline/ethanolamine ki 96.5 0.0071 2.4E-07 67.6 9.9 149 166-324 56-254 (379)
414 3un9_A NLR family member X1; l 96.4 0.00036 1.2E-08 77.8 -1.3 80 1-80 133-225 (372)
415 3c5i_A Choline kinase; choline 96.4 0.014 4.7E-07 64.3 11.5 75 165-249 38-121 (369)
416 1z7x_W Ribonuclease inhibitor; 96.3 0.00054 1.8E-08 77.3 -0.7 80 1-80 63-156 (461)
417 3csv_A Aminoglycoside phosphot 96.3 0.017 5.7E-07 62.5 11.0 148 166-324 24-217 (333)
418 3rfe_A Platelet glycoprotein I 96.2 0.0049 1.7E-07 58.2 5.8 51 2-55 16-68 (130)
419 3un9_A NLR family member X1; l 95.9 0.0012 4E-08 73.6 -0.5 80 1-80 108-197 (372)
420 3i1a_A Spectinomycin phosphotr 95.6 0.051 1.7E-06 59.4 11.2 32 293-324 205-236 (339)
421 3f2s_A CK, chetk-alpha, cholin 95.3 0.084 2.9E-06 59.3 11.9 150 165-323 57-279 (401)
422 3ogk_B Coronatine-insensitive 95.2 0.0018 6.1E-08 75.5 -2.4 63 17-79 462-526 (592)
423 1io0_A Tropomodulin; LRR prote 94.9 0.0048 1.6E-07 61.5 0.0 66 14-79 32-106 (185)
424 2yle_A Protein spire homolog 1 94.6 0.2 6.7E-06 51.6 11.2 123 248-409 34-156 (229)
425 3rfe_A Platelet glycoprotein I 94.4 0.039 1.3E-06 51.9 5.3 57 21-79 11-68 (130)
426 1io0_A Tropomodulin; LRR prote 94.3 0.005 1.7E-07 61.4 -1.3 79 1-79 43-136 (185)
427 3mes_A Choline kinase; malaria 94.0 0.23 7.8E-06 56.2 11.4 75 165-249 75-157 (424)
428 3sb4_A Hypothetical leucine ri 93.6 0.055 1.9E-06 58.4 5.2 57 17-75 225-283 (329)
429 3ogk_B Coronatine-insensitive 93.5 0.0097 3.3E-07 69.2 -1.3 66 15-80 161-234 (592)
430 2p1m_B Transport inhibitor res 92.9 0.0083 2.8E-07 69.8 -3.1 65 14-79 428-494 (594)
431 3g15_A CK, chetk-alpha, cholin 91.6 0.75 2.6E-05 51.2 11.1 30 295-324 245-280 (401)
432 2ra8_A Uncharacterized protein 91.4 0.031 1.1E-06 62.0 -0.5 65 16-80 217-293 (362)
433 2p1m_B Transport inhibitor res 90.9 0.022 7.5E-07 66.2 -2.5 67 15-81 102-171 (594)
434 2ra8_A Uncharacterized protein 90.1 0.024 8.3E-07 62.8 -3.0 64 16-79 250-320 (362)
435 3sb4_A Hypothetical leucine ri 88.9 0.28 9.7E-06 52.7 4.5 77 1-80 233-311 (329)
436 1pgv_A TMD-1, tropomodulin TMD 78.6 0.83 2.9E-05 46.1 2.2 64 16-79 39-111 (197)
437 4ann_A ESSB; membrane protein, 78.1 4 0.00014 41.7 7.1 88 267-383 76-163 (215)
438 3cxl_A N-chimerin; SH2, RHO-GA 76.3 0.28 9.7E-06 56.0 -2.2 60 164-226 146-213 (463)
439 4fdw_A Leucine rich hypothetic 75.6 2.5 8.6E-05 47.0 5.3 59 12-74 152-211 (401)
440 1pgv_A TMD-1, tropomodulin TMD 73.1 0.83 2.8E-05 46.1 0.5 64 13-76 65-136 (197)
441 3e4g_A ATP synthase subunit S, 69.5 0.7 2.4E-05 45.8 -1.0 47 9-55 52-99 (176)
442 3zyq_A Hepatocyte growth facto 68.0 1.5 5.3E-05 45.1 1.2 48 720-767 165-218 (226)
443 4fdw_A Leucine rich hypothetic 67.0 4.1 0.00014 45.3 4.5 36 18-55 248-284 (401)
444 1y02_A CARP2, FYVE-ring finger 65.8 1.8 6.3E-05 40.1 1.1 94 720-836 20-114 (120)
445 3e4g_A ATP synthase subunit S, 65.4 3.4 0.00012 40.8 3.1 43 13-55 80-128 (176)
446 2ro1_A Transcription intermedi 64.6 5.9 0.0002 39.5 4.7 48 720-770 3-51 (189)
447 1vfy_A Phosphatidylinositol-3- 62.7 1.3 4.4E-05 37.3 -0.5 48 720-767 12-65 (73)
448 2yw8_A RUN and FYVE domain-con 61.9 3 0.0001 35.8 1.7 48 720-767 20-71 (82)
449 1dvp_A HRS, hepatocyte growth 60.1 1.6 5.6E-05 44.6 -0.4 46 721-766 163-214 (220)
450 3t7l_A Zinc finger FYVE domain 59.9 1.1 3.7E-05 39.4 -1.5 61 720-780 21-85 (90)
451 1z2q_A LM5-1; membrane protein 59.3 1.6 5.5E-05 37.7 -0.5 48 720-767 22-75 (84)
452 4ano_A ESSB; membrane protein, 57.3 11 0.00038 38.5 5.3 82 268-379 81-164 (219)
453 1joc_A EEA1, early endosomal a 57.3 2.9 0.0001 38.9 0.9 47 720-766 70-120 (125)
454 1fp0_A KAP-1 corepressor; PHD 50.2 9.4 0.00032 33.3 2.8 49 719-770 25-74 (88)
455 2lua_A Protein MALE-specific l 49.0 5.2 0.00018 31.2 0.9 32 538-569 2-39 (52)
456 1x4u_A Zinc finger, FYVE domai 44.2 7.7 0.00026 33.3 1.4 48 720-767 15-74 (84)
457 3u5n_A E3 ubiquitin-protein li 42.7 18 0.00062 36.3 4.1 72 720-794 8-83 (207)
458 3mpx_A FYVE, rhogef and PH dom 40.8 5.8 0.0002 44.3 0.0 48 720-767 376-428 (434)
459 1wfk_A Zinc finger, FYVE domai 40.7 6.2 0.00021 34.4 0.2 47 720-767 10-62 (88)
460 1yk4_A Rubredoxin, RD; electro 38.9 12 0.00041 29.3 1.6 35 734-768 2-44 (52)
461 1mm2_A MI2-beta; PHD, zinc fin 37.4 23 0.00078 28.4 3.1 48 720-770 10-58 (61)
462 2yql_A PHD finger protein 21A; 35.2 17 0.00058 28.6 2.0 47 719-768 9-56 (56)
463 1e8j_A Rubredoxin; iron-sulfur 35.2 16 0.00055 28.6 1.8 35 734-768 3-45 (52)
464 2k0a_A PRE-mRNA-splicing facto 34.7 3.8 0.00013 36.5 -2.1 29 720-751 46-81 (109)
465 4h09_A Hypothetical leucine ri 34.2 35 0.0012 36.6 5.1 59 13-73 258-317 (379)
466 4fs7_A Uncharacterized protein 33.9 32 0.0011 37.4 4.7 59 13-74 292-351 (394)
467 1wfl_A Zinc finger protein 216 33.4 21 0.00071 30.1 2.2 39 716-762 22-60 (74)
468 2ks1_B Epidermal growth factor 32.2 21 0.0007 27.1 1.8 13 106-118 13-25 (44)
469 3o36_A Transcription intermedi 31.3 52 0.0018 32.2 5.2 49 720-771 5-54 (184)
470 1dx8_A Rubredoxin; electron tr 30.9 17 0.00059 30.3 1.4 38 733-770 6-51 (70)
471 1s24_A Rubredoxin 2; electron 30.3 14 0.00049 32.1 0.8 37 732-768 33-77 (87)
472 2kn9_A Rubredoxin; metalloprot 29.9 18 0.00061 31.1 1.3 37 733-769 26-70 (81)
473 2apo_B Ribosome biogenesis pro 27.7 19 0.00065 29.1 1.0 25 720-747 7-31 (60)
474 4gt6_A Cell surface protein; l 27.5 64 0.0022 34.9 5.7 60 12-74 282-342 (394)
475 4rxn_A Rubredoxin; electron tr 26.2 26 0.00087 27.7 1.5 36 734-769 3-46 (54)
476 2aus_D NOP10, ribosome biogene 26.1 15 0.00052 29.7 0.2 25 720-747 6-30 (60)
477 2v3b_B Rubredoxin 2, rubredoxi 25.7 23 0.0008 28.0 1.2 36 734-769 3-46 (55)
478 2l2t_A Receptor tyrosine-prote 24.7 21 0.00073 27.0 0.8 8 109-116 15-22 (44)
479 1wfp_A Zinc finger (AN1-like) 24.2 37 0.0013 28.6 2.2 30 716-747 22-51 (74)
480 1f62_A Transcription factor WS 23.9 28 0.00094 26.6 1.3 47 721-767 2-49 (51)
481 6rxn_A Rubredoxin; electron tr 23.6 27 0.00094 26.6 1.2 33 734-768 4-39 (46)
482 1xwh_A Autoimmune regulator; P 23.4 31 0.0011 28.1 1.6 49 719-770 8-57 (66)
483 4gt6_A Cell surface protein; l 23.1 47 0.0016 36.0 3.5 62 12-76 305-367 (394)
484 2l5u_A Chromodomain-helicase-D 21.8 31 0.0011 27.6 1.3 50 718-770 10-60 (61)
485 1x4s_A Protein FON, zinc finge 20.9 29 0.00099 28.0 0.9 31 720-750 12-43 (59)
486 1cja_A Protein (actin-fragmin 20.7 3E+02 0.01 29.8 9.1 77 236-324 156-237 (342)
487 2e6r_A Jumonji/ARID domain-con 20.4 41 0.0014 29.4 1.8 49 720-768 17-66 (92)
488 2ec7_A GAG polyprotein (PR55GA 20.2 45 0.0015 25.4 1.8 16 716-731 3-18 (49)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.8e-51 Score=453.65 Aligned_cols=268 Identities=23% Similarity=0.383 Sum_probs=204.5
Q ss_pred cCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|.+.++||+|+||.||+|++.. +++.||||+++.......++|.+|+++|++++|||||+++|+| .+.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-----~~~ 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC-----TEG 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EEC
Confidence 456788999999999999998753 5789999999866666667899999999999999999999997 345
Q ss_pred ceEEEEEeecCCCChhhhccccccccc-----ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDK-----RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~-----~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
+..+||||||++|+|.++|+....... .......++|.+++.|+.|||+||+||| +++||||||||+||||+
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEEC
Confidence 678999999999999999964221100 1123457999999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhH
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~ 388 (873)
+++++||+|||+++...............||+.|||||++.+..++.++|||||||+||||+| |+.||.......
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~---- 268 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE---- 268 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH----
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH----
Confidence 999999999999997655444444445679999999999999999999999999999999999 899997632111
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
+++...... ..+.+ ..++..+.+|+.+||+.||++||||.||++.|+.+
T Consensus 269 -------------~~~~i~~g~-----------~~~~p-------~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l 317 (329)
T 4aoj_A 269 -------------AIDCITQGR-----------ELERP-------RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317 (329)
T ss_dssp -------------HHHHHHHTC-----------CCCCC-------TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred -------------HHHHHHcCC-----------CCCCc-------ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 111110000 00000 11234588999999999999999999999999988
Q ss_pred HH
Q 002857 469 KK 470 (873)
Q Consensus 469 ~~ 470 (873)
.+
T Consensus 318 ~~ 319 (329)
T 4aoj_A 318 AQ 319 (329)
T ss_dssp HH
T ss_pred hh
Confidence 65
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2e-51 Score=449.01 Aligned_cols=269 Identities=23% Similarity=0.407 Sum_probs=212.6
Q ss_pred cCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|.+.+.||+|+||+||+|++.. ++..||||+++.......++|.+|+++|++++|||||+++|+| .++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-----~~~ 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC-----VEG 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEE-----eeC
Confidence 467888999999999999998753 5778999999866666667899999999999999999999997 345
Q ss_pred ceEEEEEeecCCCChhhhcccccccc---cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEED---KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~---~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
+..+||||||++|+|.++|+...... ........++|.+++.|+.|||+||+||| +++||||||||+||||+++
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCC
Confidence 67899999999999999996421100 01123567999999999999999999999 8999999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHH
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~ 390 (873)
+++||+|||+|+...............||+.|||||++.+..++.++|||||||+||||+| |+.||.......
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~------ 238 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE------ 238 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH------
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH------
Confidence 9999999999997655443333444569999999999999999999999999999999999 899997632111
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
++....... ....| ..++.++.+|+.+||+.||++||||+||++.|+.+.+
T Consensus 239 -----------~~~~i~~~~---------~~~~p---------~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 239 -----------VIECITQGR---------VLQRP---------RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp -----------HHHHHHHTC---------CCCCC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----------HHHHHHcCC---------CCCCC---------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 111110000 00001 0123458899999999999999999999999998765
Q ss_pred h
Q 002857 471 K 471 (873)
Q Consensus 471 ~ 471 (873)
.
T Consensus 290 ~ 290 (299)
T 4asz_A 290 A 290 (299)
T ss_dssp H
T ss_pred c
Confidence 3
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.5e-51 Score=446.25 Aligned_cols=262 Identities=25% Similarity=0.411 Sum_probs=201.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|.+.++||+|+||+||+|++. ..||||+++.... ...+.|.+|+++|++++|||||+++|+|. .+..
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~------~~~~ 106 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDNL 106 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE------CCeE
Confidence 56788899999999999999863 2599999874432 33467999999999999999999999863 2347
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
+||||||++|+|.++|+. ....++|.+++.|+.|||+||+||| +++||||||||+||||++++++||+
T Consensus 107 ~iVmEy~~gGsL~~~l~~---------~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~ 174 (307)
T 3omv_A 107 AIVTQWCEGSSLYKHLHV---------QETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIG 174 (307)
T ss_dssp EEEEECCSSCBHHHHHHT---------SCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEEC
T ss_pred EEEEEcCCCCCHHHHHhh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEe
Confidence 999999999999999953 3456999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCC---CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG---HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|||+|+...............||+.|||||++.+ ..|+.++|||||||+||||+||+.||........ +..
T Consensus 175 DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~----- 248 (307)
T 3omv_A 175 DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIF----- 248 (307)
T ss_dssp CCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHH-----
T ss_pred eccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHH-----
Confidence 9999987654433333445679999999999864 4689999999999999999999999975322111 111
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
++.... ..|... .....++..+.+|+.+||+.||++||||.||++.|+.++..+
T Consensus 249 -------~~~~~~--------------~~p~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 249 -------MVGRGY--------------ASPDLS---KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -------HHHTTC--------------CCCCST---TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -------HHhcCC--------------CCCCcc---cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 110000 000000 000123445889999999999999999999999999886544
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.5e-50 Score=444.02 Aligned_cols=265 Identities=22% Similarity=0.385 Sum_probs=207.4
Q ss_pred CCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 161 GFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++++.++||+|+||+||+|++. .+++.||||+++.... ...++|.+|+.+|++++|||||+++|+|. .+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-----~~ 101 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT-----KD 101 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SS
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE-----EC
Confidence 4566789999999999999874 3567899999975433 34578999999999999999999999973 45
Q ss_pred ceEEEEEeecCCCChhhhcccccccc------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEED------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
+..+||||||++|+|.++|+...... ........++|.+++.|+.|||+||+||| +.+||||||||+||||
T Consensus 102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl 178 (308)
T 4gt4_A 102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLV 178 (308)
T ss_dssp SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEE
Confidence 66899999999999999996411100 00112356999999999999999999999 8999999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhh
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNL 387 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l 387 (873)
++++++||+|||+++...............||+.|||||++.+..++.++|||||||+||||+| |+.||....... +
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~--~ 256 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD--V 256 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH--H
T ss_pred CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH--H
Confidence 9999999999999997755444444445679999999999999999999999999999999999 899997632211 1
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
.. .+. ... ..|.+ ..++..+.+|+.+||+.||++||||.||++.|+.
T Consensus 257 ~~------------~i~---~~~-----------~~~~p-------~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 257 VE------------MIR---NRQ-----------VLPCP-------DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HH------------HHH---TTC-----------CCCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HH------------HHH---cCC-----------CCCCc-------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 11 110 000 00110 1234458899999999999999999999999985
Q ss_pred H
Q 002857 468 I 468 (873)
Q Consensus 468 i 468 (873)
+
T Consensus 304 ~ 304 (308)
T 4gt4_A 304 W 304 (308)
T ss_dssp S
T ss_pred c
Confidence 3
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3e-49 Score=432.56 Aligned_cols=282 Identities=23% Similarity=0.313 Sum_probs=201.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|.+.++||+|+||+||+|++ +|+.||||+++.... ....+..|+..+.+++|||||+++|+|.... ......+|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEE
Confidence 4577889999999999999988 578999999964321 1122344555667889999999999986422 12246899
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC-----CCCeeeccCCCCCeeeCCCCCe
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC-----KPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~-----s~gIvHrDLKpsNILLd~~~~v 314 (873)
||||+++|+|.++|+. ..++|..+++|+.|+|+||+|||+.+ .++||||||||+||||+.++++
T Consensus 79 V~Ey~~~gsL~~~l~~-----------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~ 147 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEECCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred EecCCCCCcHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCE
Confidence 9999999999999953 35899999999999999999999321 2399999999999999999999
Q ss_pred EEecccccccccccccc--ccccccccccccCCCcccCCC------CCCcchhhHhHHHHHHHHHhCCCCCCcccccchh
Q 002857 315 CVADFGIARFLEATNEQ--TSSIGVKGTTGYIAPEYGMGH------ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLN 386 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~------~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~ 386 (873)
||+|||+|+........ .......||+.|||||++.+. .++.++|||||||+||||+||+.||.........
T Consensus 148 Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p 227 (303)
T 3hmm_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp EECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred EEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc
Confidence 99999999876544322 122345799999999998764 4678999999999999999999887653222211
Q ss_pred hHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 387 LQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 387 l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
+..+.... ....++........ ..|..+... ...+++..+.+|+.+||+.||++||||.||++.|+
T Consensus 228 ~~~~~~~~--~~~~~~~~~~~~~~-----------~rp~~p~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 228 YYDLVPSD--PSVEEMRKVVCEQK-----------LRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp TTTTSCSS--CCHHHHHHHHTTSC-----------CCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred chhccccc--chHHHHHHHHhccc-----------CCCCCCccc-cchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 11111100 01111111111100 001111100 11234567889999999999999999999999999
Q ss_pred HHHH
Q 002857 467 LIKK 470 (873)
Q Consensus 467 ~i~~ 470 (873)
.|.+
T Consensus 294 ~l~~ 297 (303)
T 3hmm_A 294 QLSQ 297 (303)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8865
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.3e-48 Score=436.28 Aligned_cols=278 Identities=20% Similarity=0.275 Sum_probs=215.9
Q ss_pred HHHHHhhcCCCcceeecccCceEEEEEEEcCC-----CcEEEEEEeeccCC-cchhHHHHHHHHHHhhhh-ccceeeeee
Q 002857 153 EALYSATKGFSSENLIGAGNFASVYKGILFEG-----APAVAIKVFNFLHH-DASKSFTVECEVMRNIIH-RKIIKVVTA 225 (873)
Q Consensus 153 ~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~-----g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~H-pNIV~llg~ 225 (873)
++.+...++|++.+.||+|+||.||+|++... ++.||||+++.... ...+.|.+|+++|.+++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 34444567899999999999999999998653 36899999975433 334679999999999965 899999999
Q ss_pred eecccccCCceEEEEEeecCCCChhhhccccccccc------ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeec
Q 002857 226 CSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDK------RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHC 299 (873)
Q Consensus 226 c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~------~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHr 299 (873)
|. ..+...+||||||++|+|.++|+....... .......+++.+++.|+.|||+||+||| +++||||
T Consensus 137 ~~----~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHR 209 (353)
T 4ase_A 137 CT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 209 (353)
T ss_dssp EC----CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EE----ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecC
Confidence 74 334568999999999999999964221100 0112456899999999999999999999 8999999
Q ss_pred cCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCC
Q 002857 300 DIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSD 378 (873)
Q Consensus 300 DLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~ 378 (873)
||||+|||+++++++||+|||+|+.+.............||+.|||||++.+..++.++|||||||+||||+| |+.||.
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999997755544444455679999999999999999999999999999999998 999997
Q ss_pred cccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCH
Q 002857 379 DMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKI 458 (873)
Q Consensus 379 ~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm 458 (873)
....... + ...+..... ...|. .+..++.+++.+||+.||++||||
T Consensus 290 ~~~~~~~-~------------~~~i~~g~~------------~~~p~---------~~~~~~~~li~~c~~~dP~~RPt~ 335 (353)
T 4ase_A 290 GVKIDEE-F------------CRRLKEGTR------------MRAPD---------YTTPEMYQTMLDCWHGEPSQRPTF 335 (353)
T ss_dssp TCCCSHH-H------------HHHHHHTCC------------CCCCT---------TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCHHHH-H------------HHHHHcCCC------------CCCCc---------cCCHHHHHHHHHHcCcChhHCcCH
Confidence 6322110 1 111110000 00010 123357889999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 002857 459 NDVELGLRLIKKK 471 (873)
Q Consensus 459 ~EVl~~Le~i~~~ 471 (873)
.||++.|+.+.+.
T Consensus 336 ~eil~~L~~llq~ 348 (353)
T 4ase_A 336 SELVEHLGNLLQA 348 (353)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988653
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=9.9e-49 Score=435.67 Aligned_cols=251 Identities=22% Similarity=0.273 Sum_probs=199.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|+++|++++|||||++++++ .+++..
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~-----~~~~~~ 98 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESF-----EENGSL 98 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEE-----EECCEE
Confidence 689999999999999999999999999999999975432 3346799999999999999999999995 456789
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
+|||||+++|+|.++|.. .....+++.+++.|+.||+.||+||| +++||||||||+||||+.++++||+
T Consensus 99 yiVmEy~~gg~L~~~i~~--------~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~ 167 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINA--------QKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLG 167 (350)
T ss_dssp EEEEECCTTCBHHHHHHH--------TTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEEC
T ss_pred EEEEeCCCCCcHHHHHHH--------cCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEc
Confidence 999999999999999953 23456788999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
|||+|+.+.... .......||+.|||||++.+..|+.++|||||||+||||+||+.||......
T Consensus 168 DFGla~~~~~~~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-------------- 231 (350)
T 4b9d_A 168 DFGIARVLNSTV--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-------------- 231 (350)
T ss_dssp STTEESCCCHHH--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------------
T ss_pred ccccceeecCCc--ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------------
Confidence 999998764322 1223457999999999999999999999999999999999999999753211
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+++...+...+. +... .....+.+|+.+||+.||++|||+.|+++
T Consensus 232 ---~~~~~i~~~~~~-----------~~~~-------~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 232 ---NLVLKIISGSFP-----------PVSL-------HYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ---HHHHHHHHTCCC-----------CCCT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHHcCCCC-----------CCCc-------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111111111100 0000 01234778999999999999999999976
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4e-48 Score=430.17 Aligned_cols=250 Identities=21% Similarity=0.262 Sum_probs=205.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
+.|+..++||+|+||+||+|+++.+++.||||+++.......+.+.+|+++|++++|||||++++++ ..++..+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECCEEEE
Confidence 4688999999999999999999999999999999876666667899999999999999999999995 45678999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
||||+++|+|.+++.. ..+++.++..|+.||+.||+||| +++||||||||+||||+.++++||+||
T Consensus 149 vmEy~~gg~L~~~l~~-----------~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DF 214 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH-----------TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDF 214 (346)
T ss_dssp EECCCTTEEHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecC
Confidence 9999999999999842 35899999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|+|+.+..... ......||+.|||||++.+..|+.++|||||||++|||++|+.||...... .....
T Consensus 215 Gla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~--------- 281 (346)
T 4fih_A 215 GFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKM--------- 281 (346)
T ss_dssp TTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHH---------
T ss_pred cCceecCCCCC--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHH---------
Confidence 99987654322 233467999999999999999999999999999999999999999753111 11111
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+.+. . .+...... .....+.+|+.+||+.||++|||+.|+++
T Consensus 282 --i~~~-~---------------~~~~~~~~----~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 282 --IRDN-L---------------PPRLKNLH----KVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp --HHHS-S---------------CCCCSCGG----GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --HHcC-C---------------CCCCCccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1100 0 00000000 11234778999999999999999998754
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1e-47 Score=417.80 Aligned_cols=249 Identities=24% Similarity=0.349 Sum_probs=195.0
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEE
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
...++||+|+||+||+|.+..++..||||++.... ....+.|.+|+++|++++|||||++++++.... ......+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEEE
Confidence 56678999999999999999999999999997432 233467999999999999999999999874321 234568999
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC--eeeccCCCCCeeeC-CCCCeEEe
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP--IAHCDIKPSNILLN-DEMTACVA 317 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g--IvHrDLKpsNILLd-~~~~vKLs 317 (873)
|||+++|+|.++|+. ...+++..+..|+.||+.||+||| +++ ||||||||+||||+ .++.+||+
T Consensus 108 mEy~~gg~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~ 174 (290)
T 3fpq_A 108 TELMTSGTLKTYLKR----------FKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIG 174 (290)
T ss_dssp EECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEEC
T ss_pred EeCCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEE
Confidence 999999999999953 356899999999999999999999 666 99999999999998 47899999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
|||+|+.... .......||+.|||||++.+ .|+.++|||||||+||||+||+.||....... .+...+.
T Consensus 175 DFGla~~~~~----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-~~~~~i~----- 243 (290)
T 3fpq_A 175 DLGLATLKRA----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYRRVT----- 243 (290)
T ss_dssp CTTGGGGCCT----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHHHHHT-----
T ss_pred eCcCCEeCCC----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-HHHHHHH-----
Confidence 9999986432 22334679999999999865 69999999999999999999999996532111 1111100
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.......+. . ....++.+|+.+||+.||++|||+.|+++
T Consensus 244 ------~~~~~~~~~-----------------~----~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 244 ------SGVKPASFD-----------------K----VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ------TTCCCGGGG-----------------G----CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------cCCCCCCCC-----------------c----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000000 0 01124778999999999999999999864
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=8.5e-48 Score=426.14 Aligned_cols=258 Identities=21% Similarity=0.265 Sum_probs=205.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.+.|.+.++||+|+||.||+|+++.+++.||||+++... ...+|+.+|++++|||||++++++ .+++..+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~-----~~~~~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAV-----REGPWVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEE-----EETTEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEE-----EECCEEE
Confidence 356788899999999999999999999999999997432 235799999999999999999995 4567899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC-CeEEe
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM-TACVA 317 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~-~vKLs 317 (873)
|||||+++|+|.++|+. ...+++.+++.|+.||+.||+||| +++||||||||+||||+.++ ++||+
T Consensus 127 ivmEy~~gg~L~~~l~~----------~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~ 193 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQ----------MGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALC 193 (336)
T ss_dssp EEECCCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEEC
T ss_pred EEEeccCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEe
Confidence 99999999999999953 346999999999999999999999 89999999999999999887 69999
Q ss_pred cccccccccccccc---ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 318 DFGIARFLEATNEQ---TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 318 DFGla~~~~~~~~~---~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|||+|+.+...... .......||+.|||||++.+..|+.++|||||||++|||+||+.||........ +
T Consensus 194 DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~------- 265 (336)
T 4g3f_A 194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-C------- 265 (336)
T ss_dssp CCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-H-------
T ss_pred eCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-H-------
Confidence 99999976543221 122235699999999999999999999999999999999999999976332211 0
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
..+... .+. ....| ..+...+.+++.+||+.||++|||+.||++.|.......
T Consensus 266 -----~~i~~~----~~~-------~~~~~---------~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 266 -----LKIASE----PPP-------IREIP---------PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp -----HHHHHS----CCG-------GGGSC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -----HHHHcC----CCC-------chhcC---------ccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 111110 000 00000 011234778999999999999999999999998876654
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.3e-48 Score=424.92 Aligned_cols=251 Identities=24% Similarity=0.357 Sum_probs=207.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||+||+|++..+++.||||+++.. .....+.+.+|+++|++++|||||++++++ .+++.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF-----QDDEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCE
Confidence 5799999999999999999999999999999999743 234457799999999999999999999995 56778
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+++|+|.++|.. .+.+++.++..|+.||+.||+||| +++|+||||||+||||+.++++||
T Consensus 107 ~yivmEy~~gG~L~~~i~~----------~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl 173 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRK----------IGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQI 173 (311)
T ss_dssp EEEEECCCTTEEHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEE
Confidence 9999999999999999942 356999999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||+|+.+.............||+.|||||++.+..|+.++||||+||++|||+||+.||......
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------------- 240 (311)
T 4aw0_A 174 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG------------- 240 (311)
T ss_dssp CCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------------
T ss_pred EEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------------
Confidence 9999999875544444445568999999999999999999999999999999999999999753211
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
+++...+...+. .|. ....++.+|+.+||+.||++|||+.|++..
T Consensus 241 ----~~~~~i~~~~~~----------~p~---------~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 241 ----LIFAKIIKLEYD----------FPE---------KFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp ----HHHHHHHHTCCC----------CCT---------TCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred ----HHHHHHHcCCCC----------CCc---------ccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 111111111100 010 011246789999999999999999987543
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.8e-47 Score=431.56 Aligned_cols=250 Identities=21% Similarity=0.271 Sum_probs=205.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
+.|++.++||+|+||.||+|+++.+++.||||+++.......+.+.+|+.+|++++|||||++++++ ..++..||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EECCEEEE
Confidence 5699999999999999999999999999999999876666677899999999999999999999995 45678999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecc
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADF 319 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDF 319 (873)
|||||++|+|.++++. ..+++.++..|+.||+.||+||| +++||||||||+||||+.++.+||+||
T Consensus 226 VmEy~~gG~L~~~i~~-----------~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DF 291 (423)
T 4fie_A 226 VMEFLEGGALTDIVTH-----------TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDF 291 (423)
T ss_dssp EEECCTTEEHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHhc-----------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecC
Confidence 9999999999999842 34899999999999999999999 899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhH
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
|+|+.+..... .....+||+.|||||++.+..|+.++|||||||++|||++|+.||...... .....+.....
T Consensus 292 Gla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~--- 364 (423)
T 4fie_A 292 GFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLP--- 364 (423)
T ss_dssp TTCEECCSSCC--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCC---
T ss_pred ccceECCCCCc--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCCC---
Confidence 99987654322 233467999999999999999999999999999999999999999652111 11111100000
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+...... .....+.+|+.+||+.||++|||+.|+++
T Consensus 365 ------------------------~~~~~~~----~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 365 ------------------------PRLKNLH----KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ------------------------CCCSCTT----SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------------------------CCCcccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000000 01234778999999999999999998754
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-46 Score=406.89 Aligned_cols=246 Identities=24% Similarity=0.314 Sum_probs=187.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|+++|++++|||||++++++ ...+.
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~-----~~~~~ 87 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSKDE 87 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EECCE
Confidence 58999999999999999999999999999999997432 23346799999999999999999999995 56778
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+ +|+|.++|.. ...+++.++..++.||+.||+||| +++|+||||||+|||++.++++||
T Consensus 88 ~~ivmEy~-~g~L~~~l~~----------~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl 153 (275)
T 3hyh_A 88 IIMVIEYA-GNELFDYIVQ----------RDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKI 153 (275)
T ss_dssp EEEEEECC-CEEHHHHHHH----------SCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEE
T ss_pred EEEEEeCC-CCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEE
Confidence 99999999 6899999842 456999999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+|+...... ......||+.|||||++.+..+ +.++|||||||++|||+||+.||......
T Consensus 154 ~DFGla~~~~~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~------------ 218 (275)
T 3hyh_A 154 ADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP------------ 218 (275)
T ss_dssp CCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------------
T ss_pred eecCCCeecCCCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH------------
Confidence 9999998654322 2234579999999999998876 57999999999999999999999752111
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
++........+ ..|. . ....+.+++.+||+.||++|||+.|+++
T Consensus 219 -----~~~~~i~~~~~----------~~p~--~-------~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 219 -----VLFKNISNGVY----------TLPK--F-------LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----HHHHHHHHTCC----------CCCT--T-------SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -----HHHHHHHcCCC----------CCCC--C-------CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 11111110000 0010 0 1224778999999999999999999875
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.1e-46 Score=405.74 Aligned_cols=257 Identities=20% Similarity=0.309 Sum_probs=187.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccc-------
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDY------- 231 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~------- 231 (873)
++|++.+.||+|+||+||+|+++.+++.||||+++..... ..+.+.+|+++|++++|||||++++++.....
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4689999999999999999999999999999999754433 34678999999999999999999998754221
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
......+|||||+++|+|.+++... ......++..++.|+.||+.||+||| +++||||||||+||||+.+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~ 154 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGR-------CTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMD 154 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTC-------CSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTT
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhc-------CCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCC
Confidence 1233579999999999999999530 11123455668899999999999999 8999999999999999999
Q ss_pred CCeEEeccccccccccccccc----------cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccc
Q 002857 312 MTACVADFGIARFLEATNEQT----------SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMF 381 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~----------~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~ 381 (873)
+++||+|||+|+.+....... ......||+.|||||++.+..|+.++|||||||++|||++ ||....
T Consensus 155 ~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~ 231 (299)
T 4g31_A 155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM 231 (299)
T ss_dssp CCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc
Confidence 999999999998765432211 1223569999999999999999999999999999999996 775421
Q ss_pred ccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHH
Q 002857 382 KDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDV 461 (873)
Q Consensus 382 ~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EV 461 (873)
.... .+..+.+.. ... ...+....+.+|+.+||+.||++|||+.||
T Consensus 232 ~~~~------------~~~~~~~~~------------------~p~----~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 277 (299)
T 4g31_A 232 ERVR------------TLTDVRNLK------------------FPP----LFTQKYPCEYVMVQDMLSPSPMERPEAINI 277 (299)
T ss_dssp HHHH------------HHHHHHTTC------------------CCH----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHH------------HHHHHhcCC------------------CCC----CCcccCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 1000 000110000 000 011112235679999999999999999998
Q ss_pred HH
Q 002857 462 EL 463 (873)
Q Consensus 462 l~ 463 (873)
++
T Consensus 278 l~ 279 (299)
T 4g31_A 278 IE 279 (299)
T ss_dssp HT
T ss_pred hc
Confidence 65
No 15
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.5e-46 Score=411.07 Aligned_cols=200 Identities=26% Similarity=0.354 Sum_probs=167.9
Q ss_pred cCCCcceeecccCceEEEEEEEc---CCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILF---EGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~---~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|++.+.||+|+||+||+|+.. .+++.||||+++... ......+.+|+++|++++|||||++++++ .++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF-----QTE 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEE-----EET
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EEC
Confidence 57999999999999999999874 357899999996432 22335688999999999999999999995 456
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..+|||||+++|+|.++|.. ...+++.++..|+.||+.||+||| +++|+||||||+|||++.++++
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~----------~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~v 165 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSK----------EVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHI 165 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHH----------HCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCE
Confidence 789999999999999999942 356899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
||+|||+|+....... ......||+.|||||++.+..++.++|||||||++|||+||+.||..
T Consensus 166 Kl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~ 228 (304)
T 3ubd_A 166 KLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228 (304)
T ss_dssp EEESSEEEEC-----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EecccccceeccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC
Confidence 9999999986543222 22345799999999999999999999999999999999999999975
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.3e-44 Score=405.20 Aligned_cols=208 Identities=24% Similarity=0.286 Sum_probs=176.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecc-cccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRV-DYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~-~~~~~~ 235 (873)
.++|++.+.||+|+||+||+|++..+|+.||||+++.... ...+.+.+|+++|++++|||||++++++... .+.+.+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 3679999999999999999999999999999999974432 2345788999999999999999999987532 234556
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..+|||||++ |+|.++|. ....+++.++..|+.||+.||+||| +.+||||||||+|||++.++.+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~----------~~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~K 198 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIH----------SSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELK 198 (398)
T ss_dssp CEEEEEECCS-EEHHHHHT----------SSSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEE
T ss_pred EEEEEEeCCC-CCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEE
Confidence 7999999995 68999984 3467999999999999999999999 89999999999999999999999
Q ss_pred Eecccccccccccc--ccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 316 VADFGIARFLEATN--EQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 316 LsDFGla~~~~~~~--~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|+|||+|+.+.... .........||+.|||||++.+. .++.++||||+||++|||++|+.||...
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~ 266 (398)
T 4b99_A 199 IGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266 (398)
T ss_dssp ECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred EeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC
Confidence 99999998764332 12223456799999999998875 5689999999999999999999999763
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.3e-42 Score=389.05 Aligned_cols=201 Identities=23% Similarity=0.333 Sum_probs=169.7
Q ss_pred HhhcCCCcceeecccCceEEEEEEEc---CCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeeccccc
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILF---EGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~---~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~ 232 (873)
...++|++.++||+|+||+||+|+++ .+++.||||++... .....+.+|+++|+.+ +|||||++++++ .
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~-----~ 90 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCF-----R 90 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEE-----E
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEE-----E
Confidence 45688999999999999999999875 35678999998643 2345788999999998 699999999985 5
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC-
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE- 311 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~- 311 (873)
..+..+|||||+++|+|.+++. .+++.++..++.||+.||+||| +.+|+||||||+|||++.+
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~~-------------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~ 154 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDILN-------------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRL 154 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHHT-------------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTT
T ss_pred ECCEEEEEEeCCCcccHHHHHc-------------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCC
Confidence 5678999999999999999883 3788899999999999999999 8999999999999999876
Q ss_pred CCeEEecccccccccccccc--------------------------ccccccccccccCCCcccCCC-CCCcchhhHhHH
Q 002857 312 MTACVADFGIARFLEATNEQ--------------------------TSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFG 364 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~--------------------------~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfG 364 (873)
+.+||+|||+|+........ ......+||+.|+|||++.+. .++.++||||+|
T Consensus 155 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG 234 (361)
T 4f9c_A 155 KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG 234 (361)
T ss_dssp TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhH
Confidence 79999999999865432110 111234699999999998876 589999999999
Q ss_pred HHHHHHHhCCCCCCcc
Q 002857 365 ILLLEMFTGLRPSDDM 380 (873)
Q Consensus 365 vvL~ELlTGk~Pf~~~ 380 (873)
|++|||+||+.||...
T Consensus 235 ~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYKA 250 (361)
T ss_dssp HHHHHHHHTCSSSSCC
T ss_pred HHHHHHHHCCCCCCCC
Confidence 9999999999999653
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.4e-42 Score=379.53 Aligned_cols=285 Identities=30% Similarity=0.463 Sum_probs=222.6
Q ss_pred cCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecc
Q 002857 150 VSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRV 229 (873)
Q Consensus 150 ~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~ 229 (873)
+++.++..++++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--- 104 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC--- 104 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC---
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE---
Confidence 34445667889999999999999999999986 46889999998866666678899999999999999999999996
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
...+..++||||+++|+|.+++... ......+++.+++.|+.||+.||+||| +.+|+||||||+|||++
T Consensus 105 --~~~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~ 173 (321)
T 2qkw_B 105 --DERNEMILIYKYMENGNLKRHLYGS------DLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLD 173 (321)
T ss_dssp --CCTTCCEEEEECCTTCBTGGGSSSS------CCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEEC
T ss_pred --cCCCeEEEEEEcCCCCcHHHHHhcc------CCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEEC
Confidence 4456789999999999999999531 122346899999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccccc-chhhH
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKD-NLNLQ 388 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~-~~~l~ 388 (873)
.++.+||+|||+++...............||..|+|||++.+..++.++||||||+++|||+||+.||...... .....
T Consensus 174 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~ 253 (321)
T 2qkw_B 174 ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253 (321)
T ss_dssp TTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHH
T ss_pred CCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHH
Confidence 99999999999998654333323333456899999999998889999999999999999999999999763322 12222
Q ss_pred HHHhhcCc-hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 389 NWVQSALP-ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 389 ~~~~~~~~-~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
.|...... ..+..++++.+.. ....++...+.+++.+||+.||++|||+.||++.|+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 312 (321)
T 2qkw_B 254 EWAVESHNNGQLEQIVDPNLAD---------------------KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312 (321)
T ss_dssp HHTHHHHTTTCCCSSSSSSCTT---------------------CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHhhhccccccHHHhcChhhcc---------------------ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 22211100 0111111111110 0112345678899999999999999999999999998
Q ss_pred HHH
Q 002857 468 IKK 470 (873)
Q Consensus 468 i~~ 470 (873)
+.+
T Consensus 313 ~l~ 315 (321)
T 2qkw_B 313 ALR 315 (321)
T ss_dssp HHH
T ss_pred Hhh
Confidence 764
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=4.3e-42 Score=375.64 Aligned_cols=287 Identities=33% Similarity=0.548 Sum_probs=224.7
Q ss_pred CCccCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeee
Q 002857 147 FPYVSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTA 225 (873)
Q Consensus 147 ~~~~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~ 225 (873)
...+++.++..++++|++.+.||+|+||.||+|.+ .+++.||||++..... .....+.+|++++++++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 46789999999999999999999999999999975 4688999999875432 233478999999999999999999999
Q ss_pred eecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCC
Q 002857 226 CSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSN 305 (873)
Q Consensus 226 c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsN 305 (873)
+ ......++||||+++|+|.++++. .......+++..++.|+.||+.||+|||..+..+|+||||||+|
T Consensus 96 ~-----~~~~~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~N 164 (326)
T 3uim_A 96 C-----MTPTERLLVYPYMANGSVASCLRE------RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAAN 164 (326)
T ss_dssp E-----CCSSCCEEEEECCTTCBHHHHHHC------CSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGG
T ss_pred E-----ecCCceEEEEEeccCCCHHHHHHh------ccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhh
Confidence 6 345667999999999999999954 11234569999999999999999999993222399999999999
Q ss_pred eeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccc---c
Q 002857 306 ILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMF---K 382 (873)
Q Consensus 306 ILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~---~ 382 (873)
||++.++.+||+|||+++....... .......||..|+|||++.+..++.++||||||+++|||+||+.||+... .
T Consensus 165 il~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 243 (326)
T 3uim_A 165 ILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 243 (326)
T ss_dssp EEECTTCCEEECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTT
T ss_pred EEECCCCCEEeccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccc
Confidence 9999999999999999987643322 22334559999999999988889999999999999999999999996421 1
Q ss_pred cchhhHHHHhhcCch-hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHH
Q 002857 383 DNLNLQNWVQSALPE-RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDV 461 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~-~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EV 461 (873)
.......|+...... .+..+.+..+.... ..+....+.+++.+||+.||++|||+.||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~l~~li~~cl~~dP~~Rps~~el 302 (326)
T 3uim_A 244 DDVMLLDWVKGLLKEKKLEALVDVDLQGNY---------------------KDEEVEQLIQVALLCTQSSPMERPKMSEV 302 (326)
T ss_dssp SCSBHHHHHTTTTSSCCSTTSSCTTCTTSC---------------------CHHHHHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred cchhHHHHHHHHhhchhhhhhcChhhcccc---------------------CHHHHHHHHHHHHHHhCcCCccCCCHHHH
Confidence 222334444333322 22222222221111 12335578999999999999999999999
Q ss_pred HHHHHH
Q 002857 462 ELGLRL 467 (873)
Q Consensus 462 l~~Le~ 467 (873)
+++|+.
T Consensus 303 l~~L~~ 308 (326)
T 3uim_A 303 VRMLEG 308 (326)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 999985
No 20
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=369.08 Aligned_cols=267 Identities=24% Similarity=0.385 Sum_probs=215.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|.+.++||+|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++. .+...+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY-----KDKRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEe-----cCCeeE
Confidence 357889999999999999999999999999999987655566678999999999999999999999963 456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++|+|.+++.. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 84 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~D 151 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKS---------MDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVAD 151 (310)
T ss_dssp EEEECCTTCBHHHHHHH---------CCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECC
T ss_pred EEEEecCCCcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEee
Confidence 99999999999999953 3456899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccc------------cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchh
Q 002857 319 FGIARFLEATNEQT------------SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLN 386 (873)
Q Consensus 319 FGla~~~~~~~~~~------------~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~ 386 (873)
||+++......... ......||+.|+|||++.+..++.++||||||+++|||++|..||.........
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~ 231 (310)
T 3s95_A 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD 231 (310)
T ss_dssp CTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT
T ss_pred cccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH
Confidence 99998764432211 111346999999999999999999999999999999999999998653322211
Q ss_pred hHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 387 LQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 387 l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
... ......+...... +...+.+++.+||+.||++|||+.||++.|+
T Consensus 232 ~~~--------~~~~~~~~~~~~~-------------------------~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 232 FGL--------NVRGFLDRYCPPN-------------------------CPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp SSB--------CHHHHHHHTCCTT-------------------------CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Hhh--------hhhccccccCCCC-------------------------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 100 1111111111110 1224778999999999999999999999999
Q ss_pred HHHHhhhcC
Q 002857 467 LIKKKLLET 475 (873)
Q Consensus 467 ~i~~~l~~~ 475 (873)
.++..+...
T Consensus 279 ~l~~~~~~~ 287 (310)
T 3s95_A 279 TLRMHLAGH 287 (310)
T ss_dssp HHHHHHHHC
T ss_pred HHHHhccCc
Confidence 998877543
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.3e-42 Score=406.80 Aligned_cols=253 Identities=21% Similarity=0.297 Sum_probs=205.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||+|+||.||+|+++.+|+.||||++........+.+.+|+++|+.++|||||++++++ ......+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-----~~~~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEE-----ECSSEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEE
Confidence 36899999999999999999999999999999999866555567899999999999999999999995 5677899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC--CCeEE
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE--MTACV 316 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~--~~vKL 316 (873)
||||||++|+|.++|.. ....+++.++..|+.||+.||+||| +++|+||||||+|||++.+ +.+||
T Consensus 231 iv~E~~~gg~L~~~i~~---------~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl 298 (573)
T 3uto_A 231 MIYEFMSGGELFEKVAD---------EHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKL 298 (573)
T ss_dssp EEEECCCCCBHHHHHTC---------TTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEeecCCCcHHHHHHH---------hCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEE
Confidence 99999999999999842 3456999999999999999999999 8999999999999999854 89999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||+|+.+.... ......||+.|||||++.+..|+.++|||||||++|||++|+.||....... .
T Consensus 299 ~DFG~a~~~~~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~--~--------- 364 (573)
T 3uto_A 299 IDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE--T--------- 364 (573)
T ss_dssp CCCSSCEECCTTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--H---------
T ss_pred eeccceeEccCCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--H---------
Confidence 9999999775432 2234569999999999999999999999999999999999999997632211 0
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+..+....... + ..... .....+.+|+.+||+.||++|||+.|+++
T Consensus 365 --~~~i~~~~~~~--------------~-~~~~~----~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 365 --LRNVKSCDWNM--------------D-DSAFS----GISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --HHHHHTTCCCC--------------C-SGGGT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --HHHHHhCCCCC--------------C-ccccc----CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01111100000 0 00000 01224678999999999999999998754
No 22
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=8.2e-41 Score=362.00 Aligned_cols=283 Identities=30% Similarity=0.461 Sum_probs=221.7
Q ss_pred CCCccCHHHHHHhhcCCCcc------eeecccCceEEEEEEEcCCCcEEEEEEeeccC----CcchhHHHHHHHHHHhhh
Q 002857 146 DFPYVSYEALYSATKGFSSE------NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH----HDASKSFTVECEVMRNII 215 (873)
Q Consensus 146 ~~~~~s~~el~~at~~f~~~------~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~----~~~~~~f~~Ei~iL~~L~ 215 (873)
....|++.++..++++|... +.||+|+||.||+|.+ +++.||||++.... ....+.+.+|++++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 45789999999999999887 8999999999999976 67899999986432 233467999999999999
Q ss_pred hccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC
Q 002857 216 HRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP 295 (873)
Q Consensus 216 HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g 295 (873)
||||+++++++ ...+..++||||+++|+|.+++.. ......+++..++.|+.||+.||+||| +.+
T Consensus 89 h~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~-------~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ 153 (307)
T 2nru_A 89 HENLVELLGFS-----SDGDDLCLVYVYMPNGSLLDRLSC-------LDGTPPLSWHMRCKIAQGAANGINFLH---ENH 153 (307)
T ss_dssp CTTBCCEEEEE-----CSSSSCEEEEECCTTCBHHHHHHT-------GGGCCCCCHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred CCCeEEEEEEE-----ecCCceEEEEEecCCCcHHHHHHh-------ccCCCCCCHHHHHHHHHHHHHHHHHHh---cCC
Confidence 99999999996 445678999999999999999853 122456899999999999999999999 899
Q ss_pred eeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCC
Q 002857 296 IAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLR 375 (873)
Q Consensus 296 IvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~ 375 (873)
|+||||||+|||++.++.+||+|||+++...............||..|+|||++.+ .++.++||||||+++|||++|+.
T Consensus 154 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~ 232 (307)
T 2nru_A 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLP 232 (307)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCC
T ss_pred eecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999987654333333334568999999998765 58899999999999999999999
Q ss_pred CCCcccccchhhHHHHhhc--CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcC
Q 002857 376 PSDDMFKDNLNLQNWVQSA--LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPG 453 (873)
Q Consensus 376 Pf~~~~~~~~~l~~~~~~~--~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~ 453 (873)
||....... .+..+.... ....+.+.++..+... .......+.+++.+||+.+|+
T Consensus 233 p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~l~~li~~cl~~~p~ 289 (307)
T 2nru_A 233 AVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDKKMNDA----------------------DSTSVEAMYSVASQCLHEKKN 289 (307)
T ss_dssp SBCTTBSSS-BTTHHHHHHHTTSCCHHHHSCSSCSCC----------------------CHHHHHHHHHHHHHHTCSSTT
T ss_pred CcccCcchH-HHHHHHHHhhhhhhhhhhhcccccccc----------------------chHHHHHHHHHHHHHcCCCcc
Confidence 997643221 111111100 0112222222221110 112345688999999999999
Q ss_pred CCCCHHHHHHHHHHHH
Q 002857 454 ERMKINDVELGLRLIK 469 (873)
Q Consensus 454 eRPTm~EVl~~Le~i~ 469 (873)
+|||+.+|++.|+.+.
T Consensus 290 ~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 290 KRPDIKKVQQLLQEMT 305 (307)
T ss_dssp TSCCHHHHHHHHHHHC
T ss_pred cCcCHHHHHHHHHHHh
Confidence 9999999999999874
No 23
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.2e-41 Score=373.30 Aligned_cols=281 Identities=25% Similarity=0.362 Sum_probs=210.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.++||+|+||.||+|++. ++.||||++.... .....+..|+.++++++||||+++++++.... ......+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceEE
Confidence 468999999999999999999874 7899999996433 22345667899999999999999999975422 2244579
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC----------CeeeccCCCCCeee
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP----------PIAHCDIKPSNILL 308 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~----------gIvHrDLKpsNILL 308 (873)
+||||+++|+|.++++. ..+++..++.|+.||+.||+||| +. +|+||||||+|||+
T Consensus 99 lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill 164 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKA-----------NVVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLL 164 (322)
T ss_dssp EEEECCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEE
T ss_pred EEEecCCCCCHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEE
Confidence 99999999999999942 34899999999999999999999 77 99999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCCC-----CCCcchhhHhHHHHHHHHHhCCCCCCccccc
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-----ETSSYGDVYSFGILLLEMFTGLRPSDDMFKD 383 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-----~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~ 383 (873)
+.++.+||+|||+++...............||..|+|||++.+. .++.++||||||+++|||+||+.||......
T Consensus 165 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~ 244 (322)
T 3soc_A 165 KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244 (322)
T ss_dssp CTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCC
T ss_pred CCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcch
Confidence 99999999999999876554433334445799999999998873 5667899999999999999999999764332
Q ss_pred ch-hhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 384 NL-NLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 384 ~~-~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
.. .+...... .....++.+..... ...|...... ....+...+.+|+.+||+.||++|||+.||+
T Consensus 245 ~~~~~~~~~~~--~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 310 (322)
T 3soc_A 245 YMLPFEEEIGQ--HPSLEDMQEVVVHK-----------KKRPVLRDYW-QKHAGMAMLCETIEECWDHDAEARLSAGCVG 310 (322)
T ss_dssp CCCTTHHHHCS--SCCHHHHHHHHTTS-----------CCCCCCCGGG-GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred hccchhhhhcc--CCchhhhhhhhhcc-----------cCCCCccccc-cccchHHHHHHHHHHHccCChhhCcCHHHHH
Confidence 11 11111110 01111111111111 0011111100 0112345688999999999999999999999
Q ss_pred HHHHHHHHh
Q 002857 463 LGLRLIKKK 471 (873)
Q Consensus 463 ~~Le~i~~~ 471 (873)
+.|+.|++.
T Consensus 311 ~~L~~l~~~ 319 (322)
T 3soc_A 311 ERITQMQRL 319 (322)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 24
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3e-41 Score=400.95 Aligned_cols=198 Identities=23% Similarity=0.329 Sum_probs=170.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHH---HHHHHhhhhccceeeeeeeecccccC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVE---CEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~E---i~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
++|++.++||+|+||.||+|+++.+++.||||+++... ......+.+| +.+++.++|||||++++++ .+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f-----~~ 263 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HT 263 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE-----EC
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEE-----EE
Confidence 67999999999999999999999999999999996321 2222334444 5566677899999999985 66
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
.+..+|||||++||+|.++|.. ...+++..+..++.||+.||+||| +.+||||||||+||||+.+++
T Consensus 264 ~~~lylVmEy~~GGdL~~~l~~----------~~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~ 330 (689)
T 3v5w_A 264 PDKLSFILDLMNGGDLHYHLSQ----------HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGH 330 (689)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH----------HCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSC
T ss_pred CCEEEEEEecCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCC
Confidence 7789999999999999999942 356999999999999999999999 999999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+||+|||+|+.+.... ....+||+.|||||++.+ ..|+.++|||||||+||||++|+.||..
T Consensus 331 vKL~DFGlA~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~ 393 (689)
T 3v5w_A 331 VRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393 (689)
T ss_dssp EEECCCTTCEECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCG
T ss_pred EEecccceeeecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999998764332 234579999999999975 5799999999999999999999999975
No 25
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.2e-41 Score=363.55 Aligned_cols=278 Identities=23% Similarity=0.369 Sum_probs=208.0
Q ss_pred hcCCCcceeecccCceEEEEEEE----cCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGIL----FEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~----~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++.. ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECH---HHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCC
Confidence 46789999999999999999984 45789999999986655556789999999999999999999998743 223
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++|+|.+++.. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~ 153 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQK---------HKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 153 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHH---------CGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEE
T ss_pred CceEEEEEeCCCCCHHHHHHh---------cccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeE
Confidence 457999999999999999953 2335899999999999999999999 8999999999999999999999
Q ss_pred EEecccccccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||+||..|+.....+ .......
T Consensus 154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~ 230 (295)
T 3ugc_A 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGN 230 (295)
T ss_dssp EECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCT
T ss_pred EEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcC
Confidence 99999999876443221 1222334778899999999999999999999999999999999998653211 1111111
Q ss_pred cCch--hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHh
Q 002857 394 ALPE--RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKK 471 (873)
Q Consensus 394 ~~~~--~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~ 471 (873)
.... ....+.+.... ....+... .+...+.+++.+||+.||++|||+.||++.|+.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 231 DKQGQMIVFHLIELLKN-----------NGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TCCTHHHHHHHHHHHHT-----------TCCCCCCT-------TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccccchhHHHHHHHHhc-----------cCcCCCCc-------CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 1000 00111111000 00111111 1234588999999999999999999999999998775
Q ss_pred h
Q 002857 472 L 472 (873)
Q Consensus 472 l 472 (873)
+
T Consensus 293 l 293 (295)
T 3ugc_A 293 M 293 (295)
T ss_dssp -
T ss_pred c
Confidence 4
No 26
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.9e-41 Score=372.56 Aligned_cols=283 Identities=19% Similarity=0.254 Sum_probs=216.2
Q ss_pred ccCHHHHHHhhcCCCcceeecccCceEEEEEEE-----cCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhcccee
Q 002857 149 YVSYEALYSATKGFSSENLIGAGNFASVYKGIL-----FEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIK 221 (873)
Q Consensus 149 ~~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~-----~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~ 221 (873)
.+...+.....++|.+.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|++++.++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 345566666788999999999999999999985 34568999999975432 2346799999999999 7999999
Q ss_pred eeeeeecccccCCceEEEEEeecCCCChhhhccccccccc----------------------------------------
Q 002857 222 VVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDK---------------------------------------- 261 (873)
Q Consensus 222 llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~---------------------------------------- 261 (873)
+++++. ..+...++||||+++|+|.++++.......
T Consensus 91 ~~~~~~----~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (359)
T 3vhe_A 91 LLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSG 166 (359)
T ss_dssp EEEEEC----STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------
T ss_pred eeeeee----cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccc
Confidence 999974 334558999999999999999964211000
Q ss_pred ----------------ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccc
Q 002857 262 ----------------RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFL 325 (873)
Q Consensus 262 ----------------~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~ 325 (873)
.......+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 243 (359)
T 3vhe_A 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243 (359)
T ss_dssp -----------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred cccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeee
Confidence 0001223899999999999999999999 889999999999999999999999999999876
Q ss_pred ccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhHHHHhh
Q 002857 326 EATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERVEEIVD 404 (873)
Q Consensus 326 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid 404 (873)
.............||..|+|||++.+..++.++||||||+++|||+| |+.||........ +...+.
T Consensus 244 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-------------~~~~~~ 310 (359)
T 3vhe_A 244 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------------FCRRLK 310 (359)
T ss_dssp TSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-------------HHHHHH
T ss_pred cccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-------------HHHHHH
Confidence 54433333444568999999999999999999999999999999999 9999976322211 011110
Q ss_pred hhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 405 TLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 405 ~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
..... ..|. .+...+.+++..||+.||++|||+.||++.|+.+.+..
T Consensus 311 ~~~~~------------~~~~---------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 311 EGTRM------------RAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HTCCC------------CCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCC------------CCCC---------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 00000 0000 01234788999999999999999999999999987643
No 27
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2e-40 Score=357.08 Aligned_cols=269 Identities=24% Similarity=0.403 Sum_probs=202.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHh--hhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRN--IIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~--L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|++ +++.||||++... ....+..|.+++.. ++||||+++++++... ......
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTS-RHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCce
Confidence 56899999999999999999987 6889999998632 34567778888777 7999999999987542 233556
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC-----CCCeeeccCCCCCeeeCCC
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC-----KPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~-----s~gIvHrDLKpsNILLd~~ 311 (873)
.++||||+++|+|.++++ ...+++..++.|+.||+.||+|||... +.+|+||||||+|||++.+
T Consensus 81 ~~lv~e~~~~g~L~~~l~-----------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~ 149 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQ-----------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN 149 (301)
T ss_dssp EEEEECCCTTCBHHHHHT-----------TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTT
T ss_pred eEEehhhccCCCHHHHHh-----------hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCC
Confidence 899999999999999994 246899999999999999999999321 5799999999999999999
Q ss_pred CCeEEeccccccccccccccc--cccccccccccCCCcccCCC------CCCcchhhHhHHHHHHHHHhC----------
Q 002857 312 MTACVADFGIARFLEATNEQT--SSIGVKGTTGYIAPEYGMGH------ETSSYGDVYSFGILLLEMFTG---------- 373 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~--~~~~~~Gt~~Y~APE~l~~~------~~s~ksDVwSfGvvL~ELlTG---------- 373 (873)
+.+||+|||+++......... ......||..|+|||++.+. .++.++||||||+++|||+||
T Consensus 150 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~ 229 (301)
T 3q4u_A 150 GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 229 (301)
T ss_dssp SCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccc
Confidence 999999999998664433221 12234699999999998876 456799999999999999999
Q ss_pred CCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcC
Q 002857 374 LRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPG 453 (873)
Q Consensus 374 k~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~ 453 (873)
+.||............. ...+. .. ...+.... ......+...+.+++.+||+.||+
T Consensus 230 ~~pf~~~~~~~~~~~~~---------~~~~~---~~-----------~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~ 285 (301)
T 3q4u_A 230 KPPFYDVVPNDPSFEDM---------RKVVC---VD-----------QQRPNIPN-RWFSDPTLTSLAKLMKECWYQNPS 285 (301)
T ss_dssp CCTTTTTSCSSCCHHHH---------HHHHT---TS-----------CCCCCCCG-GGGGSHHHHHHHHHHHHHCCSSGG
T ss_pred cccccccCCCCcchhhh---------hHHHh---cc-----------CCCCCCCh-hhccCccHHHHHHHHHHHhhcChh
Confidence 67765432221111110 01000 00 00000000 001112355688999999999999
Q ss_pred CCCCHHHHHHHHHHH
Q 002857 454 ERMKINDVELGLRLI 468 (873)
Q Consensus 454 eRPTm~EVl~~Le~i 468 (873)
+|||+.||++.|+.|
T Consensus 286 ~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 286 ARLTALRIKKTLTKI 300 (301)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHhcc
Confidence 999999999999976
No 28
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.8e-40 Score=360.04 Aligned_cols=251 Identities=22% Similarity=0.279 Sum_probs=204.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||+|+||.||+|.+..+++.||||++........+.+.+|+.++++++||||+++++++ ...+..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEE-----EECCEEE
Confidence 46899999999999999999999889999999999866666667899999999999999999999986 3456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++|+|.+++.. ..+++.+++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 94 lv~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~D 159 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTD 159 (297)
T ss_dssp EEEECCTTCBHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECC
T ss_pred EEEECCCCCCHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEee
Confidence 99999999999999842 24889999999999999999999 88999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||+++....... ......||..|+|||++.+..++.++||||||+++|||+||+.||........ +.
T Consensus 160 fg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~---------- 226 (297)
T 3fxz_A 160 FGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LY---------- 226 (297)
T ss_dssp CTTCEECCSTTC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HH----------
T ss_pred CCCceecCCccc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HH----------
Confidence 999986644322 22345699999999999999999999999999999999999999965321110 00
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.... .+...... .....+.+++.+||+.||++|||+.|+++
T Consensus 227 --~~~~~~----------------~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 227 --LIATNG----------------TPELQNPE----KLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp --HHHHHC----------------SCCCSCGG----GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --HHHhCC----------------CCCCCCcc----ccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 000000 00000000 11234778999999999999999999865
No 29
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.4e-40 Score=360.41 Aligned_cols=263 Identities=21% Similarity=0.249 Sum_probs=211.3
Q ss_pred CCccCHHHHHHhhcC----------CCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhh
Q 002857 147 FPYVSYEALYSATKG----------FSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIH 216 (873)
Q Consensus 147 ~~~~s~~el~~at~~----------f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~H 216 (873)
.+.++++++..+++. |...+.||+|+||.||+|++..+++.||||++........+.+.+|+.++++++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 456888999888865 6777899999999999999988899999999987666666789999999999999
Q ss_pred ccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCe
Q 002857 217 RKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPI 296 (873)
Q Consensus 217 pNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gI 296 (873)
+||+++++++. ..+..++||||+++|+|.+++. ...+++..++.++.||+.||+||| +.+|
T Consensus 102 ~niv~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~-----------~~~l~~~~~~~i~~qi~~~L~~LH---~~~i 162 (321)
T 2c30_A 102 FNVVEMYKSYL-----VGEELWVLMEFLQGGALTDIVS-----------QVRLNEEQIATVCEAVLQALAYLH---AQGV 162 (321)
T ss_dssp TTBCCEEEEEE-----ETTEEEEEECCCCSCBHHHHHT-----------TCCCCHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred CCcceEEEEEE-----ECCEEEEEEecCCCCCHHHHHH-----------hcCCCHHHHHHHHHHHHHHHHHHH---HCCe
Confidence 99999999963 4567899999999999999984 235899999999999999999999 8899
Q ss_pred eeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCC
Q 002857 297 AHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRP 376 (873)
Q Consensus 297 vHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~P 376 (873)
+||||||+|||++.++.+||+|||+++....... ......||..|+|||++.+..++.++||||||+++|||++|+.|
T Consensus 163 vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p 240 (321)
T 2c30_A 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240 (321)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred ecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999986644322 22345699999999999999999999999999999999999999
Q ss_pred CCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC
Q 002857 377 SDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM 456 (873)
Q Consensus 377 f~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP 456 (873)
|...... .... .+.+.. .+...... .....+.+++.+||+.||++||
T Consensus 241 f~~~~~~--~~~~-----------~~~~~~----------------~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rp 287 (321)
T 2c30_A 241 YFSDSPV--QAMK-----------RLRDSP----------------PPKLKNSH----KVSPVLRDFLERMLVRDPQERA 287 (321)
T ss_dssp TTTSCHH--HHHH-----------HHHHSS----------------CCCCTTGG----GSCHHHHHHHHHHSCSSTTTSC
T ss_pred CCCCCHH--HHHH-----------HHhcCC----------------CCCcCccc----cCCHHHHHHHHHHccCChhhCc
Confidence 9653111 0000 000000 00000000 0123477899999999999999
Q ss_pred CHHHHHH
Q 002857 457 KINDVEL 463 (873)
Q Consensus 457 Tm~EVl~ 463 (873)
|+.||++
T Consensus 288 s~~ell~ 294 (321)
T 2c30_A 288 TAQELLD 294 (321)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999876
No 30
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.5e-40 Score=368.79 Aligned_cols=277 Identities=18% Similarity=0.203 Sum_probs=208.6
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCC-----CcEEEEEEeeccCCcc-----------hhHHHHHHHHHHhhhhcccee
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEG-----APAVAIKVFNFLHHDA-----------SKSFTVECEVMRNIIHRKIIK 221 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~-----g~~VAVK~l~~~~~~~-----------~~~f~~Ei~iL~~L~HpNIV~ 221 (873)
..++|.+.+.||+|+||.||+|.+..+ ++.||||++....... ...+..|+..+..++|+||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 356899999999999999999998664 4789999986433111 112334445556667999999
Q ss_pred eeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 002857 222 VVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDI 301 (873)
Q Consensus 222 llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDL 301 (873)
+++++.... ......+|||||+ +++|.+++.. ....+++.+++.|+.||+.||+||| +.+|+||||
T Consensus 113 ~~~~~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~---------~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDl 178 (364)
T 3op5_A 113 YWGSGLHDK-NGKSYRFMIMDRF-GSDLQKIYEA---------NAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDI 178 (364)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECE-EEEHHHHHHH---------TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred EEeeeeecc-CCcceEEEEEeCC-CCCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecC
Confidence 999975421 2235689999999 9999999953 3456999999999999999999999 889999999
Q ss_pred CCCCeeeC--CCCCeEEeccccccccccccccc-----cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCC
Q 002857 302 KPSNILLN--DEMTACVADFGIARFLEATNEQT-----SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGL 374 (873)
Q Consensus 302 KpsNILLd--~~~~vKLsDFGla~~~~~~~~~~-----~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk 374 (873)
||+|||++ .++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||+||+
T Consensus 179 kp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 258 (364)
T 3op5_A 179 KASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH 258 (364)
T ss_dssp CGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999 88999999999998765432211 112345999999999999999999999999999999999999
Q ss_pred CCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCC
Q 002857 375 RPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGE 454 (873)
Q Consensus 375 ~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~e 454 (873)
.||....... .............+.++++..+... .++..+.+++..||+.+|++
T Consensus 259 ~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~li~~cl~~~p~~ 313 (364)
T 3op5_A 259 LPWEDNLKDP-KYVRDSKIRYRENIASLMDKCFPAA------------------------NAPGEIAKYMETVKLLDYTE 313 (364)
T ss_dssp CTTGGGTTCH-HHHHHHHHHHHHCHHHHHHHHSCTT------------------------CCCHHHHHHHHHHHTCCTTC
T ss_pred CCccccccCH-HHHHHHHHHhhhhHHHHHHHhcccc------------------------cCHHHHHHHHHHHhcCCCCC
Confidence 9997632221 2222222222223333333322110 01335788999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhh
Q 002857 455 RMKINDVELGLRLIKKKLL 473 (873)
Q Consensus 455 RPTm~EVl~~Le~i~~~l~ 473 (873)
||++.+|++.|+.+.....
T Consensus 314 RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 314 KPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp CCCHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHcC
Confidence 9999999999999877664
No 31
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.9e-40 Score=370.25 Aligned_cols=271 Identities=21% Similarity=0.342 Sum_probs=209.9
Q ss_pred hcCCCcceeecccCceEEEEEEEc-------CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceeeeeeeecc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILF-------EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKVVTACSRV 229 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~-------~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~ 229 (873)
.++|.+.+.||+|+||.||+|++. .++..||||+++.... ...+.+.+|+++|+++ +||||++++++|
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--- 156 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 156 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE---
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE---
Confidence 467899999999999999999874 2456799999975432 2346799999999999 899999999996
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccc------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEED------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKP 303 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKp 303 (873)
...+..++||||+++|+|.+++....... ........+++.+++.|+.||+.||+||| +.+|+||||||
T Consensus 157 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp 231 (370)
T 2psq_A 157 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 231 (370)
T ss_dssp --CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred --ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccch
Confidence 44567899999999999999996411100 00112346899999999999999999999 89999999999
Q ss_pred CCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccc
Q 002857 304 SNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFK 382 (873)
Q Consensus 304 sNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~ 382 (873)
+|||++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred hhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999999987654433333334457889999999999999999999999999999999 9999975321
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
.. +. ..+...... ..| ..+...+.+++.+||+.+|++|||+.||+
T Consensus 312 ~~--~~------------~~~~~~~~~------------~~~---------~~~~~~l~~li~~~l~~dP~~Rpt~~ell 356 (370)
T 2psq_A 312 EE--LF------------KLLKEGHRM------------DKP---------ANCTNELYMMMRDCWHAVPSQRPTFKQLV 356 (370)
T ss_dssp GG--HH------------HHHHTTCCC------------CCC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HH--HH------------HHHhcCCCC------------CCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 11 11 111000000 000 01133578899999999999999999999
Q ss_pred HHHHHHHHhh
Q 002857 463 LGLRLIKKKL 472 (873)
Q Consensus 463 ~~Le~i~~~l 472 (873)
+.|+.+....
T Consensus 357 ~~L~~il~~~ 366 (370)
T 2psq_A 357 EDLDRILTLT 366 (370)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999987644
No 32
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.1e-40 Score=362.94 Aligned_cols=254 Identities=22% Similarity=0.338 Sum_probs=202.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.+++.++||||+++++++ ..++..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecCCeE
Confidence 4689999999999999999999998999999999864332 2346789999999999999999999996 456778
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++|+|.+++. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 81 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~ 147 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIE----------PDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKIS 147 (323)
T ss_dssp EEEEECCTTEEGGGGSB----------TTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEcCCCCcHHHHHh----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEE
Confidence 99999999999999984 3456899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+++.+.............||..|+|||++.+..+ +.++||||||+++|||++|+.||.........+..+.....
T Consensus 148 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~- 226 (323)
T 3tki_A 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT- 226 (323)
T ss_dssp CCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT-
T ss_pred EeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc-
Confidence 9999987654433333344579999999999988765 77899999999999999999999764332222222111100
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.. .++ . .....+.+++.+||+.||++|||+.||++
T Consensus 227 -----------~~-------------~~~----~----~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 227 -----------YL-------------NPW----K----KIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp -----------TS-------------TTG----G----GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----------cC-------------Ccc----c----cCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00 000 0 01234678999999999999999998864
No 33
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.9e-41 Score=377.07 Aligned_cols=262 Identities=25% Similarity=0.367 Sum_probs=208.2
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
..++|.+.+.||+|+||.||+|++..+++.||||+++.... .....|.+|+++|++++||||++++++| ...+.
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~ 186 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQP 186 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEE-----CSSSS
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----ecCCC
Confidence 34678899999999999999999988899999999874432 2345789999999999999999999996 34556
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.++++. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 187 ~~lv~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl 254 (377)
T 3cbl_A 187 IYIVMELVQGGDFLTFLRT---------EGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKI 254 (377)
T ss_dssp CEEEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEcCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEE
Confidence 8999999999999999953 2235889999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+++...............++..|+|||++.+..++.++||||||+++|||+| |..||.......
T Consensus 255 ~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~----------- 323 (377)
T 3cbl_A 255 SDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ----------- 323 (377)
T ss_dssp CCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH-----------
T ss_pred CcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------
Confidence 99999986433221111112235778999999998899999999999999999999 999997532111
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHh
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKK 471 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~ 471 (873)
..+.+.... ..+... .++..+.+++.+||+.||++|||+.+|++.|+.+++.
T Consensus 324 ---~~~~~~~~~--------------~~~~~~-------~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 324 ---TREFVEKGG--------------RLPCPE-------LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ---HHHHHHTTC--------------CCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHcCC--------------CCCCCC-------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 111111100 000000 1233578899999999999999999999999998764
No 34
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.4e-40 Score=360.35 Aligned_cols=264 Identities=26% Similarity=0.370 Sum_probs=198.0
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
...++|++.+.||+|+||.||+|++ +++.||||++..... ...+.+.+|++++++++||||+++++++ ...
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~ 106 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV-----TQP 106 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CST
T ss_pred CChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EEC
Confidence 3456889999999999999999987 678899999875432 2345789999999999999999999996 445
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC--eeeccCCCCCeeeCCCC
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP--IAHCDIKPSNILLNDEM 312 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g--IvHrDLKpsNILLd~~~ 312 (873)
...++||||+++|+|.+++... .....+++..++.|+.||+.||+||| +.+ |+||||||+|||++.++
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~ 176 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKS-------GAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKY 176 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHST-------THHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTC
T ss_pred CceEEEEecCCCCcHHHHHhhc-------CCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCC
Confidence 6689999999999999999531 11123889999999999999999999 788 99999999999999999
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
.+||+|||+++...... .......||..|+|||++.+..++.++||||||+++|||+||+.||........ ..
T Consensus 177 ~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~--~~--- 249 (309)
T 3p86_A 177 TVKVCDFGLSRLKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV--VA--- 249 (309)
T ss_dssp CEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HH---
T ss_pred cEEECCCCCCccccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HH---
Confidence 99999999998643321 122345689999999999999999999999999999999999999975321110 00
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
.+.... ...+... .+...+.+++.+||+.+|++|||+.||++.|+.+.+..
T Consensus 250 --------~~~~~~--------------~~~~~~~-------~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 250 --------AVGFKC--------------KRLEIPR-------NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp --------HHHHSC--------------CCCCCCT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred --------HHHhcC--------------CCCCCCc-------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 000000 0000000 11234788999999999999999999999999886654
Q ss_pred h
Q 002857 473 L 473 (873)
Q Consensus 473 ~ 473 (873)
.
T Consensus 301 ~ 301 (309)
T 3p86_A 301 V 301 (309)
T ss_dssp -
T ss_pred C
Confidence 3
No 35
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.5e-40 Score=360.77 Aligned_cols=263 Identities=25% Similarity=0.408 Sum_probs=200.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|.+.+.||+|+||.||+|.+. ..+|+|+++.... ...+.+.+|++++++++|+||+++++++. .+.
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~ 105 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDN 105 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred ccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------cCc
Confidence 357899999999999999999763 3589999875433 23467899999999999999999999852 345
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 106 ~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl 173 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLHV---------QETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKI 173 (307)
T ss_dssp CEEEEECCSSCBHHHHHHT---------SCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEE
Confidence 7899999999999999852 3567899999999999999999999 889999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+|||+++...............||..|+|||++. +..++.++||||||+++|||+||+.||......... ..
T Consensus 174 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-~~---- 248 (307)
T 3lb7_A 174 GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI-IF---- 248 (307)
T ss_dssp CCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HH----
T ss_pred ccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH-HH----
Confidence 9999998654333223333456999999999875 567899999999999999999999999753222110 00
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
.+.... ..+.... ....+...+.+++.+||+.+|++|||+.||++.|+.+...+
T Consensus 249 --------~~~~~~--------------~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 249 --------MVGRGY--------------ASPDLSK---LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp --------HHHHTC--------------CCCCSTT---SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred --------HHhcCC--------------CCcchhh---hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 000000 0000000 00112345889999999999999999999999999987654
No 36
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.8e-40 Score=364.64 Aligned_cols=261 Identities=23% Similarity=0.394 Sum_probs=200.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcE----EEEEEeecc-CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPA----VAIKVFNFL-HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~----VAVK~l~~~-~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
.++|++.++||+|+||.||+|++..+++. ||+|.++.. .....+.+.+|+.++++++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 88 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES-----
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----
Confidence 35789999999999999999998777664 578877533 23445789999999999999999999999742
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
...++|+||+++|+|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 89 -~~~~~v~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~ 155 (327)
T 3poz_A 89 -STVQLITQLMPFGCLLDYVRE---------HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp -SSEEEEEECCTTCBHHHHHHH---------STTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTE
T ss_pred -CCeEEEEEecCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCC
Confidence 237899999999999999953 3456899999999999999999999 889999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||+| |+.||.......
T Consensus 156 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------- 227 (327)
T 3poz_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------- 227 (327)
T ss_dssp EEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------
T ss_pred EEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--------
Confidence 99999999987755443333344557889999999999999999999999999999999 999997632211
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
+...+..... .+... .+...+.+++.+||+.+|++|||+.||++.|+.+....
T Consensus 228 ------~~~~~~~~~~--------------~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 228 ------ISSILEKGER--------------LPQPP-------ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp ------HHHHHHTTCC--------------CCCCT-------TBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred ------HHHHHHcCCC--------------CCCCc-------cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 1111111000 00000 01234788999999999999999999999999886543
No 37
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=363.67 Aligned_cols=261 Identities=23% Similarity=0.400 Sum_probs=205.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCC---cEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGA---PAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g---~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|.+.+.||+|+||.||+|.+..++ ..||||+++... ....+.+.+|++++++++||||+++++++ ....
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~ 123 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-----TRGR 123 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CGGG
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence 56888999999999999999987544 459999997542 23346799999999999999999999996 3456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.++++. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~k 191 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRT---------HDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCK 191 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHT---------TTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEE
T ss_pred ccEEEeeCCCCCcHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEE
Confidence 78999999999999999953 3456899999999999999999999 89999999999999999999999
Q ss_pred Eecccccccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 316 VADFGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 316 LsDFGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
|+|||+++........ .......+|..|+|||++.+..++.++||||||+++|||++ |+.||....... ...
T Consensus 192 l~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~---- 265 (325)
T 3kul_A 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VIS---- 265 (325)
T ss_dssp ECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHH----
T ss_pred ECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHH----
Confidence 9999999876543221 12223346788999999998899999999999999999999 999996532111 000
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
.+... . ..+... .+...+.+++..||+.||++|||+.||++.|+.+....
T Consensus 266 -------~~~~~-~--------------~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 266 -------SVEEG-Y--------------RLPAPM-------GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp -------HHHTT-C--------------CCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred -------HHHcC-C--------------CCCCCC-------CcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 00000 0 000000 11335788999999999999999999999999986543
No 38
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.7e-39 Score=346.71 Aligned_cols=268 Identities=17% Similarity=0.209 Sum_probs=211.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++++ +|+|++++++++ ......
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFG-----QEGLHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEE-----EETTEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeec-----CCCcee
Confidence 467999999999999999999998899999999986432 335789999999999 799999999985 456678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC----
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT---- 313 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~---- 313 (873)
++||||+ +++|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 82 ~lv~e~~-~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~ 148 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDL---------CGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNAN 148 (298)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTT
T ss_pred EEEEEec-CCCHHHHHHH---------hccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCC
Confidence 9999999 9999999953 2345899999999999999999999 899999999999999987776
Q ss_pred -eEEecccccccccccccc-----ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhh
Q 002857 314 -ACVADFGIARFLEATNEQ-----TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 387 (873)
Q Consensus 314 -vKLsDFGla~~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l 387 (873)
+||+|||+++........ .......||..|+|||++.+..++.++||||||+++|||++|+.||.........
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~- 227 (298)
T 1csn_A 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK- 227 (298)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH-
T ss_pred eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH-
Confidence 999999999876543221 1223456999999999999999999999999999999999999999763221110
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
. .+..+......... ......+...+.+++.+||+.||++|||+.+|++.|+.
T Consensus 228 -~--------~~~~~~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~ 280 (298)
T 1csn_A 228 -Q--------KYERIGEKKQSTPL------------------RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSK 280 (298)
T ss_dssp -H--------HHHHHHHHHHHSCH------------------HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred -H--------HHHHHHhhccCccH------------------HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence 0 00111110000000 00000123458899999999999999999999999999
Q ss_pred HHHhhhc
Q 002857 468 IKKKLLE 474 (873)
Q Consensus 468 i~~~l~~ 474 (873)
+.+.+..
T Consensus 281 ~~~~~~~ 287 (298)
T 1csn_A 281 VLERLNT 287 (298)
T ss_dssp HHHHTTC
T ss_pred HHHhcCC
Confidence 9876643
No 39
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=360.86 Aligned_cols=287 Identities=24% Similarity=0.333 Sum_probs=203.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHH--HhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVM--RNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL--~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|++ +++.||||+++.. ....+..|.+++ ..++|+||+++++.+..........
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46899999999999999999977 6789999998743 234455555554 4589999999998765544455667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC---------CeeeccCCCCCee
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP---------PIAHCDIKPSNIL 307 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~---------gIvHrDLKpsNIL 307 (873)
.+|||||+++|+|.+++.. ..+++..++.|+.||+.||+||| +. +|+||||||+|||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nil 152 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL-----------HTSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVL 152 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEE
T ss_pred EEEEEecCCCCcHHHHHhh-----------cccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEE
Confidence 8999999999999999943 23478899999999999999999 77 9999999999999
Q ss_pred eCCCCCeEEeccccccccccccc------cccccccccccccCCCcccCC-------CCCCcchhhHhHHHHHHHHHhCC
Q 002857 308 LNDEMTACVADFGIARFLEATNE------QTSSIGVKGTTGYIAPEYGMG-------HETSSYGDVYSFGILLLEMFTGL 374 (873)
Q Consensus 308 Ld~~~~vKLsDFGla~~~~~~~~------~~~~~~~~Gt~~Y~APE~l~~-------~~~s~ksDVwSfGvvL~ELlTGk 374 (873)
++.++.+||+|||+++.+..... ........||..|+|||++.+ ..++.++||||||+++|||+||.
T Consensus 153 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~ 232 (336)
T 3g2f_A 153 VKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRC 232 (336)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred EcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcC
Confidence 99999999999999987643221 111223469999999999887 45677899999999999999998
Q ss_pred CCCCcccccchhhHHHHhhc-CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcC
Q 002857 375 RPSDDMFKDNLNLQNWVQSA-LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPG 453 (873)
Q Consensus 375 ~Pf~~~~~~~~~l~~~~~~~-~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~ 453 (873)
.||............+.... ......++. ..... ....+...........+...+.+|+.+||+.||+
T Consensus 233 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 301 (336)
T 3g2f_A 233 TDLFPGESVPEYQMAFQTEVGNHPTFEDMQ-VLVSR----------EKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAE 301 (336)
T ss_dssp GGGSTTSCCCCCCCTTHHHHCSSCCHHHHH-HHHTT----------SCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGG
T ss_pred CcCCCccchhHHHHhhhcccCCCchHHHHH-hhhcc----------cccCCCCCcccccccchHHHHHHHHHHHhcCChh
Confidence 77644221111000000000 000111110 00000 0000110000000112345688999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhhhcC
Q 002857 454 ERMKINDVELGLRLIKKKLLET 475 (873)
Q Consensus 454 eRPTm~EVl~~Le~i~~~l~~~ 475 (873)
+|||+.||++.|+.+...+.+.
T Consensus 302 ~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 302 ARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp GSCCHHHHHHHHHHHHHCCCC-
T ss_pred hCcchHHHHHHHHHHHHHHHhc
Confidence 9999999999999998877654
No 40
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.8e-39 Score=356.44 Aligned_cols=266 Identities=20% Similarity=0.233 Sum_probs=210.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++++ +|+||+++++++ ......
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~-----~~~~~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFG-----PCGKYN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEE-----EETTEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEE-----ecCCcc
Confidence 468999999999999999999998999999999987443 235789999999999 999999999985 346678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC----
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT---- 313 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~---- 313 (873)
++||||+ +++|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 81 ~lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~ 147 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDL---------CDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQ 147 (330)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTT
T ss_pred EEEEEeC-CCCHHHHHHH---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCc
Confidence 9999999 9999999953 2457999999999999999999999 889999999999999998887
Q ss_pred -eEEeccccccccccccccc-----cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhh
Q 002857 314 -ACVADFGIARFLEATNEQT-----SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 387 (873)
Q Consensus 314 -vKLsDFGla~~~~~~~~~~-----~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l 387 (873)
+||+|||+++.+....... ......||..|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~-- 225 (330)
T 2izr_A 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL-- 225 (330)
T ss_dssp SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH--
T ss_pred eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH--
Confidence 9999999998764432211 12345699999999999999999999999999999999999999976422211
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
... +..+......... .......+ .+.+++..||+.+|.+||++.+|++.|+.
T Consensus 226 ~~~--------~~~i~~~~~~~~~------------------~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~ 278 (330)
T 2izr_A 226 KER--------YQKIGDTKRATPI------------------EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD 278 (330)
T ss_dssp HHH--------HHHHHHHHHHSCH------------------HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred HHH--------HHHHHhhhccCCH------------------HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 110 0111110000000 00000112 58899999999999999999999999998
Q ss_pred HHHhhh
Q 002857 468 IKKKLL 473 (873)
Q Consensus 468 i~~~l~ 473 (873)
+.....
T Consensus 279 ~~~~~~ 284 (330)
T 2izr_A 279 LFDRKG 284 (330)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 877654
No 41
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-40 Score=363.28 Aligned_cols=274 Identities=22% Similarity=0.381 Sum_probs=209.5
Q ss_pred HHhhcCCCcceeecccCceEEEEEEEcC-----CCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecc
Q 002857 156 YSATKGFSSENLIGAGNFASVYKGILFE-----GAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRV 229 (873)
Q Consensus 156 ~~at~~f~~~~~LG~G~fG~VYkg~~~~-----~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~ 229 (873)
....++|.+.+.||+|+||.||+|++.. +++.||||+++.... ...+.+.+|+.++++++||||+++++++
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--- 119 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC--- 119 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE---
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE---
Confidence 3456789999999999999999999863 458999999975432 2346799999999999999999999996
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccc--------------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEED--------------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP 295 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~--------------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g 295 (873)
...+..++||||+++|+|.+++....... ........+++.+++.|+.||+.||+||| +.+
T Consensus 120 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ 194 (343)
T 1luf_A 120 --AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERK 194 (343)
T ss_dssp --CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred --ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 44567899999999999999996421100 00011267899999999999999999999 899
Q ss_pred eeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CC
Q 002857 296 IAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GL 374 (873)
Q Consensus 296 IvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk 374 (873)
|+||||||+|||++.++.+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||+| |+
T Consensus 195 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 274 (343)
T 1luf_A 195 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 274 (343)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred eecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999987644332233334568899999999988899999999999999999999 99
Q ss_pred CCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCC
Q 002857 375 RPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGE 454 (873)
Q Consensus 375 ~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~e 454 (873)
.||....... .. ..+.+.... ..|. .+...+.+++.+||+.||++
T Consensus 275 ~p~~~~~~~~--~~-----------~~~~~~~~~-------------~~~~---------~~~~~l~~li~~~l~~~p~~ 319 (343)
T 1luf_A 275 QPYYGMAHEE--VI-----------YYVRDGNIL-------------ACPE---------NCPLELYNLMRLCWSKLPAD 319 (343)
T ss_dssp CTTTTSCHHH--HH-----------HHHHTTCCC-------------CCCT---------TCCHHHHHHHHHHTCSSGGG
T ss_pred CcCCCCChHH--HH-----------HHHhCCCcC-------------CCCC---------CCCHHHHHHHHHHcccCccc
Confidence 9997532111 00 011110000 0000 11235788999999999999
Q ss_pred CCCHHHHHHHHHHHHHhh
Q 002857 455 RMKINDVELGLRLIKKKL 472 (873)
Q Consensus 455 RPTm~EVl~~Le~i~~~l 472 (873)
|||+.||++.|+.+.+.+
T Consensus 320 Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 320 RPSFCSIHRILQRMCERA 337 (343)
T ss_dssp SCCHHHHHHHHHHTTC--
T ss_pred CCCHHHHHHHHHHHHhhh
Confidence 999999999999876544
No 42
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.8e-40 Score=363.72 Aligned_cols=249 Identities=22% Similarity=0.316 Sum_probs=201.9
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
...+|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+++|+.++||||+++++++ ...+
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~~ 87 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEK 87 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECC
Confidence 3568999999999999999999999999999999997543 23346788999999999999999999996 4567
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~k 154 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLVA----------HGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIK 154 (328)
T ss_dssp EEEEEECCCTTCBHHHHHHH----------HCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEE
T ss_pred EEEEEEECCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEE
Confidence 79999999999999999843 345889999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCC-cchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETS-SYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s-~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++...... ......||+.|+|||++.+..++ .++|||||||++|||++|+.||......
T Consensus 155 l~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----------- 220 (328)
T 3fe3_A 155 IADFGFSNEFTVGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK----------- 220 (328)
T ss_dssp ECSTTCCGGGSSSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----------
T ss_pred EeeccCceecCCCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH-----------
Confidence 99999998654332 22345699999999999888765 7899999999999999999999763211
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
++........+ ..|.. ....+.+++.+||+.||++|||+.|+++
T Consensus 221 ------~~~~~i~~~~~----------~~p~~---------~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 221 ------ELRERVLRGKY----------RIPFY---------MSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ------HHHHHHHHCCC----------CCCTT---------SCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ------HHHHHHHhCCC----------CCCCC---------CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111111100 00110 1224678999999999999999998865
No 43
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.1e-39 Score=346.96 Aligned_cols=258 Identities=28% Similarity=0.419 Sum_probs=206.4
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||+|+||.||+|.+. +++.||||++..... ..+.+.+|++++++++||||+++++++ ......+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCceE
Confidence 357889999999999999999885 567899999975433 346799999999999999999999996 4456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. ....+++..++.|+.|++.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~D 149 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRT---------QRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSD 149 (269)
T ss_dssp EEEECCTTCBHHHHHHT---------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECC
T ss_pred EEEEeCCCCcHHHHHHh---------cCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecc
Confidence 99999999999999953 3456899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||+++...... ........+|..|+|||++.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 150 fg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--~~--------- 217 (269)
T 4hcu_A 150 FGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VV--------- 217 (269)
T ss_dssp TTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HH---------
T ss_pred ccccccccccc-cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--HH---------
Confidence 99998654322 112223456788999999998899999999999999999999 999997532111 00
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHh
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKK 471 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~ 471 (873)
..+... ... ..+. . ....+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 218 --~~~~~~-~~~------------~~~~--~-------~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 218 --EDISTG-FRL------------YKPR--L-------ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp --HHHHTT-CCC------------CCCT--T-------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --HHHhcC-ccC------------CCCC--c-------CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 111100 000 0000 0 123477899999999999999999999999998653
No 44
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-40 Score=368.35 Aligned_cols=268 Identities=22% Similarity=0.328 Sum_probs=207.8
Q ss_pred hcCCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeeccccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~ 232 (873)
.++|.+.+.||+|+||.||+|++. .+++.||||+++... ......+.+|+.++++++||||+++++++ .
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~ 144 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-----L 144 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----e
Confidence 357889999999999999999953 456789999986432 33345789999999999999999999996 4
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
.....++||||+++|+|.+++.... ........+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++
T Consensus 145 ~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 145 QSLPRFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHS---CCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSS
T ss_pred cCCCCEEEEEeCCCCCHHHHHHhhc---cccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCC
Confidence 4556799999999999999996411 11123456899999999999999999999 89999999999999999554
Q ss_pred ---CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhH
Q 002857 313 ---TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 313 ---~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~ 388 (873)
.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |..||....... +.
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~--~~ 296 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VL 296 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HH
T ss_pred CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HH
Confidence 599999999986644333333334568999999999998999999999999999999998 999997532111 11
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
. .+...... +.. ..+...+.+|+.+||+.+|++|||+.||++.|+.+
T Consensus 297 ~------------~i~~~~~~--------------~~~-------~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 297 E------------FVTSGGRM--------------DPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp H------------HHHTTCCC--------------CCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred H------------HHHcCCCC--------------CCC-------ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 1 11000000 000 01123478899999999999999999999999988
Q ss_pred HHhh
Q 002857 469 KKKL 472 (873)
Q Consensus 469 ~~~l 472 (873)
....
T Consensus 344 ~~~~ 347 (367)
T 3l9p_A 344 TQDP 347 (367)
T ss_dssp HHCH
T ss_pred hhCh
Confidence 6543
No 45
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.2e-39 Score=350.71 Aligned_cols=260 Identities=25% Similarity=0.387 Sum_probs=202.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++ ...+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD-----EEDD 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE-----ECSS
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee-----eeCC
Confidence 4679999999999999999999998999999999864332 2346789999999999999999999995 4567
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~k 151 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIES----------HGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLK 151 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeCCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEE
Confidence 89999999999999999943 346899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||+||+.||......... ...+....
T Consensus 152 l~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-~~~~~~~~ 229 (294)
T 4eqm_A 152 IFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-IKHIQDSV 229 (294)
T ss_dssp ECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH-HHHHSSCC
T ss_pred EEeCCCccccccccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhhccC
Confidence 999999986643221 2223356899999999999999999999999999999999999999763221110 00000000
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-CHHHHHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-KINDVELGLRLI 468 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-Tm~EVl~~Le~i 468 (873)
+.... ......+..+.+++.+||+.||++|| +++++.+.|+.+
T Consensus 230 ~~~~~------------------------------~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 230 PNVTT------------------------------DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp CCHHH------------------------------HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred CCcch------------------------------hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 00000 00001133578899999999999999 899999988865
No 46
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.5e-40 Score=364.21 Aligned_cols=252 Identities=24% Similarity=0.317 Sum_probs=195.3
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
..++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|+++|++++||||+++++++ ...+.
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~-----~~~~~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL-----ETANK 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EeCCE
Confidence 4678999999999999999999999999999999987543 23346789999999999999999999996 45667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ...+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 83 ~~lv~E~~~gg~L~~~l~~----------~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL 149 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIIS----------QDRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKL 149 (347)
T ss_dssp EEEEEECCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEE
Confidence 9999999999999999843 345899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||++........ .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 150 ~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~------------ 216 (347)
T 3zgw_A 150 IDFGLCAKPKGNKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM------------ 216 (347)
T ss_dssp CCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH------------
T ss_pred EeccCcccccCCCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH------------
Confidence 99999976543222 12234568999999999988875 89999999999999999999999752111
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
++........+ ..|.. ....+.+++.+||+.||++|||+.||++.
T Consensus 217 -----~~~~~i~~~~~----------~~p~~---------~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 217 -----ALYKKIMRGKY----------DVPKW---------LSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -----HHHHHHHHTCC----------CCCTT---------CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----HHHHHHHcCCC----------CCCCC---------CCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 11111111110 00100 11246789999999999999999998764
No 47
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=5.3e-40 Score=368.70 Aligned_cols=261 Identities=26% Similarity=0.415 Sum_probs=195.8
Q ss_pred cCCCcceeecccCceEEEEEEEc---CCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILF---EGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~---~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|++.+.||+|+||.||+|++. .++..||||+++... ....+.|.+|+.++++++||||+++++++ ....
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~ 119 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-----TKSK 119 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSSS
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----eeCC
Confidence 57899999999999999999876 456789999997543 23346799999999999999999999996 3456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.++++. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~k 187 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRK---------HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 187 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHT---------TTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEE
T ss_pred ceEEEEeCCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEE
Confidence 78999999999999999953 3456899999999999999999999 88999999999999999999999
Q ss_pred Eeccccccccccccccc-cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 316 VADFGIARFLEATNEQT-SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
|+|||+++......... ......++..|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 188 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--------- 258 (373)
T 2qol_A 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------- 258 (373)
T ss_dssp ECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH---------
T ss_pred ECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---------
Confidence 99999998765432211 1122335778999999999999999999999999999998 999996532111
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
+...+..... .+... .+...+.+++.+||+.||++||++.||++.|+.+....
T Consensus 259 -----~~~~i~~~~~--------------~~~~~-------~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 259 -----VIKAVDEGYR--------------LPPPM-------DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -----HHHHHHTTEE--------------CCCCT-------TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -----HHHHHHcCCC--------------CCCCc-------cccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 1111111000 00000 11335889999999999999999999999999986643
No 48
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.3e-39 Score=357.11 Aligned_cols=258 Identities=22% Similarity=0.342 Sum_probs=203.4
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcE----EEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPA----VAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~----VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|.+.+.||+|+||.||+|++..+++. ||+|++.... ......+.+|+.++++++||||+++++++. +
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------G 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------B
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------C
Confidence 5788999999999999999999877765 7788775332 334467889999999999999999999862 3
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++|+|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~ 154 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQ---------HRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQV 154 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHS---------SGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCE
T ss_pred CccEEEEEeCCCCCHHHHHHH---------ccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeE
Confidence 458999999999999999853 2346889999999999999999999 8899999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++...............+|..|+|||++.+..++.++||||||+++|||+| |+.||.......
T Consensus 155 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------- 225 (325)
T 3kex_A 155 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--------- 225 (325)
T ss_dssp EECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---------
T ss_pred EECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---------
Confidence 9999999998755444434445568889999999998899999999999999999999 999997632111
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
+.+.+...... ..+.. +...+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 226 -----~~~~~~~~~~~------------~~~~~---------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 226 -----VPDLLEKGERL------------AQPQI---------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -----HHHHHHTTCBC------------CCCTT---------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -----HHHHHHcCCCC------------CCCCc---------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11111110000 00000 11236789999999999999999999999998744
No 49
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=9.4e-40 Score=356.63 Aligned_cols=275 Identities=22% Similarity=0.362 Sum_probs=194.6
Q ss_pred HHhhcCCCcceeecccCceEEEEEEEcCCCc---EEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeeccc
Q 002857 156 YSATKGFSSENLIGAGNFASVYKGILFEGAP---AVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVD 230 (873)
Q Consensus 156 ~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~---~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~ 230 (873)
....++|++.+.||+|+||.||+|++..++. .||||+++.. .....+.+.+|++++++++||||+++++++....
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3445789999999999999999998876654 8999998744 3344578999999999999999999999974321
Q ss_pred cc-CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 231 YQ-GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 231 ~~-~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
.. .....++||||+++|+|.+++.... .......+++.+++.|+.||+.||+||| +.+|+||||||+|||++
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~ 171 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASR----IGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLA 171 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHH----C---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhh----ccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEc
Confidence 11 0112489999999999999995311 1122346899999999999999999999 88999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhH
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~ 388 (873)
.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 172 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~ 249 (323)
T 3qup_A 172 EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--IY 249 (323)
T ss_dssp TTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HH
T ss_pred CCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--HH
Confidence 999999999999987654433333334457889999999999999999999999999999999 999997632211 11
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
..+...... +... .+...+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 250 -----------~~~~~~~~~---------------~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 250 -----------NYLIGGNRL---------------KQPP-------ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp -----------HHHHTTCCC---------------CCCT-------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----------HHHhcCCCC---------------CCCC-------ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011100000 0000 1123578999999999999999999999999998
Q ss_pred HHhh
Q 002857 469 KKKL 472 (873)
Q Consensus 469 ~~~l 472 (873)
....
T Consensus 297 l~~~ 300 (323)
T 3qup_A 297 LGHL 300 (323)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 7654
No 50
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=7.2e-39 Score=343.67 Aligned_cols=269 Identities=20% Similarity=0.290 Sum_probs=208.3
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
..++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+|+++++.++|++++..+.++. ......
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEE----EETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeec----CCCCce
Confidence 4578999999999999999999998999999999876432 2356899999999999999888888763 456678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee---CCCCCe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL---NDEMTA 314 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL---d~~~~v 314 (873)
++||||+ +++|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||+ +.++.+
T Consensus 81 ~lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~ 147 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNF---------CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLV 147 (296)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCE
T ss_pred EEEEEcc-CCCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeE
Confidence 9999999 9999999852 2446899999999999999999999 8999999999999999 788999
Q ss_pred EEecccccccccccccc-----ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHH
Q 002857 315 CVADFGIARFLEATNEQ-----TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~ 389 (873)
||+|||+++........ .......||..|+|||++.+..++.++||||||+++|||++|+.||.........
T Consensus 148 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--- 224 (296)
T 4hgt_A 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--- 224 (296)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS---
T ss_pred EEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh---
Confidence 99999999876543321 1223456899999999999999999999999999999999999999763222110
Q ss_pred HHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 390 WVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 390 ~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
..+..+....+..... .........+.+++..||+.+|++|||+.+|++.|+.+.
T Consensus 225 -------~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 225 -------QKYERISEKKMSTPIE------------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp -------SHHHHHHHHHHHSCHH------------------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred -------hhhhhhhcccccchhh------------------hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 0111111111100000 000011235889999999999999999999999999998
Q ss_pred Hhhh
Q 002857 470 KKLL 473 (873)
Q Consensus 470 ~~l~ 473 (873)
....
T Consensus 280 ~~~~ 283 (296)
T 4hgt_A 280 HRQG 283 (296)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 7664
No 51
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=348.33 Aligned_cols=252 Identities=21% Similarity=0.310 Sum_probs=195.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--------------------------cchhHHHHHHHHHH
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--------------------------DASKSFTVECEVMR 212 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--------------------------~~~~~f~~Ei~iL~ 212 (873)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999864321 12356899999999
Q ss_pred hhhhccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC
Q 002857 213 NIIHRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC 292 (873)
Q Consensus 213 ~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~ 292 (873)
+++||||+++++++.. ......++||||+++++|.+++. ...+++.+++.++.||+.||+|||
T Consensus 92 ~l~h~~iv~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~-----------~~~~~~~~~~~~~~qi~~~l~~lH--- 154 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDD---PNEDHLYMVFELVNQGPVMEVPT-----------LKPLSEDQARFYFQDLIKGIEYLH--- 154 (298)
T ss_dssp TCCCTTBCCEEEEEEC---SSSSEEEEEEECCTTCBSCCSSC-----------SSCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred hCCCCCCCeEEEEEEc---CCCCEEEEEEecCCCCcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHH---
Confidence 9999999999999742 23567899999999999998762 346899999999999999999999
Q ss_pred CCCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCC---CCcchhhHhHHHHHHH
Q 002857 293 KPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE---TSSYGDVYSFGILLLE 369 (873)
Q Consensus 293 s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~---~s~ksDVwSfGvvL~E 369 (873)
+.+|+||||||+|||++.++.+||+|||+++....... ......||..|+|||++.+.. ++.++||||||+++||
T Consensus 155 ~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~ 232 (298)
T 2zv2_A 155 YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYC 232 (298)
T ss_dssp HTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHH
T ss_pred HCCeeccCCCHHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHH
Confidence 88999999999999999999999999999987643321 223356999999999988765 4788999999999999
Q ss_pred HHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 002857 370 MFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSA 449 (873)
Q Consensus 370 LlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~ 449 (873)
|++|+.||...... .+. ..+....+ ..+... .....+.+++.+||+
T Consensus 233 l~~g~~pf~~~~~~--~~~-----------~~~~~~~~--------------~~~~~~-------~~~~~l~~li~~~l~ 278 (298)
T 2zv2_A 233 FVFGQCPFMDERIM--CLH-----------SKIKSQAL--------------EFPDQP-------DIAEDLKDLITRMLD 278 (298)
T ss_dssp HHHSSCSSCCSSHH--HHH-----------HHHHHCCC--------------CCCSSS-------CCCHHHHHHHHHHTC
T ss_pred HHHCCCCCCCccHH--HHH-----------HHHhcccC--------------CCCCcc-------ccCHHHHHHHHHHhh
Confidence 99999999652111 000 00000000 001000 012347889999999
Q ss_pred cCcCCCCCHHHHHH
Q 002857 450 ELPGERMKINDVEL 463 (873)
Q Consensus 450 ~dP~eRPTm~EVl~ 463 (873)
.||++|||+.||++
T Consensus 279 ~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 279 KNPESRIVVPEIKL 292 (298)
T ss_dssp SCTTTSCCHHHHTT
T ss_pred cChhhCCCHHHHhc
Confidence 99999999999864
No 52
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.5e-39 Score=360.18 Aligned_cols=253 Identities=21% Similarity=0.285 Sum_probs=203.1
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc------chhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD------ASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~------~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
..++|.+.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|+.+|++++||||+++++++
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~----- 84 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY----- 84 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE-----
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE-----
Confidence 356799999999999999999999999999999999754322 236789999999999999999999995
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
......++||||+++|+|.+++. ....+++..++.++.||+.||.||| +.+|+||||||+|||++.+
T Consensus 85 ~~~~~~~lv~e~~~gg~L~~~l~----------~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~ 151 (361)
T 2yab_A 85 ENRTDVVLILELVSGGELFDFLA----------QKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDK 151 (361)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHT----------TCSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCT
T ss_pred EeCCEEEEEEEcCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCC
Confidence 45678999999999999999994 3456999999999999999999999 8999999999999999877
Q ss_pred C----CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhh
Q 002857 312 M----TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 387 (873)
Q Consensus 312 ~----~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l 387 (873)
+ .+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||....... .
T Consensus 152 ~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~--~ 226 (361)
T 2yab_A 152 NIPIPHIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--T 226 (361)
T ss_dssp TSSSCCEEECCCSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--H
T ss_pred CCCccCEEEEecCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--H
Confidence 6 79999999998764432 2233569999999999999999999999999999999999999997532111 0
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. ..+...... +.. .........+.+++.+||+.||++|||+.|+++
T Consensus 227 ~-----------~~i~~~~~~--~~~-----------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 227 L-----------ANITAVSYD--FDE-----------------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp H-----------HHHHTTCCC--CCH-----------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred H-----------HHHHhcCCC--CCc-----------------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 111110000 000 000111234778999999999999999999874
No 53
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.2e-39 Score=344.49 Aligned_cols=254 Identities=26% Similarity=0.384 Sum_probs=200.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc-------hhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA-------SKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~-------~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
.++|++.+.||+|+||.||+|++..+++.||||++....... .+.+.+|++++++++||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---- 93 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH---- 93 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET----
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec----
Confidence 468999999999999999999999999999999986433221 167899999999999999999999863
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC--eeeccCCCCCeeeC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP--IAHCDIKPSNILLN 309 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g--IvHrDLKpsNILLd 309 (873)
... ++||||+++|+|.+++.. ....+++..++.++.|++.||+||| +.+ |+||||||+|||++
T Consensus 94 -~~~--~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~ 158 (287)
T 4f0f_A 94 -NPP--RMVMEFVPCGDLYHRLLD---------KAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQ 158 (287)
T ss_dssp -TTT--EEEEECCTTCBHHHHHHC---------TTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEES
T ss_pred -CCC--eEEEEecCCCCHHHHHhc---------ccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEe
Confidence 222 699999999999998842 3456899999999999999999999 788 99999999999998
Q ss_pred CCCC-----eEEeccccccccccccccccccccccccccCCCcccC--CCCCCcchhhHhHHHHHHHHHhCCCCCCcccc
Q 002857 310 DEMT-----ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM--GHETSSYGDVYSFGILLLEMFTGLRPSDDMFK 382 (873)
Q Consensus 310 ~~~~-----vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~--~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~ 382 (873)
.++. +||+|||+++.... ......||..|+|||++. ...++.++||||||+++|||++|+.||.....
T Consensus 159 ~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 233 (287)
T 4f0f_A 159 SLDENAPVCAKVADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233 (287)
T ss_dssp CCCTTCSCCEEECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred ccCCCCceeEEeCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc
Confidence 7776 99999999975432 223356899999999984 45678999999999999999999999976432
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
......... ...... +... ..+...+.+++.+||+.||++|||+.||+
T Consensus 234 ~~~~~~~~~-----------~~~~~~---------------~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll 281 (287)
T 4f0f_A 234 GKIKFINMI-----------REEGLR---------------PTIP------EDCPPRLRNVIELCWSGDPKKRPHFSYIV 281 (287)
T ss_dssp CHHHHHHHH-----------HHSCCC---------------CCCC------TTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cHHHHHHHH-----------hccCCC---------------CCCC------cccCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence 221111111 000000 0000 01123578999999999999999999999
Q ss_pred HHHHHH
Q 002857 463 LGLRLI 468 (873)
Q Consensus 463 ~~Le~i 468 (873)
+.|+++
T Consensus 282 ~~L~~l 287 (287)
T 4f0f_A 282 KELSEL 287 (287)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999853
No 54
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=353.60 Aligned_cols=252 Identities=21% Similarity=0.293 Sum_probs=201.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc------chhHHHHHHHHHHhhhhccceeeeeeeeccccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD------ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~------~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~ 232 (873)
.++|.+.+.||+|+||.||+|.+..+++.||||+++..... ..+.+.+|+.+|++++||||+++++++ .
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~ 84 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY-----E 84 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----E
Confidence 35689999999999999999999989999999998754322 346799999999999999999999996 4
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
.....++||||+++|+|.+++. ....+++..++.|+.||+.||.||| +.+|+||||||+|||++.++
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~ 151 (326)
T 2y0a_A 85 NKTDVILILELVAGGELFDFLA----------EKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRN 151 (326)
T ss_dssp CSSEEEEEEECCCSCBHHHHHT----------TSSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSS
T ss_pred eCCEEEEEEEcCCCCCHHHHHH----------hcCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCC
Confidence 5667999999999999999984 2456899999999999999999999 89999999999999999877
Q ss_pred ----CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhH
Q 002857 313 ----TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 313 ----~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~ 388 (873)
.+||+|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||....... .
T Consensus 152 ~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~- 225 (326)
T 2y0a_A 152 VPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--T- 225 (326)
T ss_dssp SSSCCEEECCCTTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--H-
T ss_pred CCCCCEEEEECCCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--H-
Confidence 899999999987643322 223469999999999999999999999999999999999999996532111 0
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+..+...... .. ..........+.+++.+||+.||++|||+.|+++
T Consensus 226 ----------~~~~~~~~~~--~~-----------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 226 ----------LANVSAVNYE--FE-----------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp ----------HHHHHHTCCC--CC-----------------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ----------HHHHHhcCCC--cC-----------------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000000000 00 0000111234778999999999999999999976
No 55
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.4e-39 Score=350.41 Aligned_cols=260 Identities=24% Similarity=0.372 Sum_probs=191.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|++. ..||||+++.... ...+.+.+|++++++++|+||+++++++ ....
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~------~~~~ 93 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS------TAPQ 93 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE------CSSS
T ss_pred ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec------cCCc
Confidence 467999999999999999999753 3599999875433 2346799999999999999999999974 3445
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++++|.+++.. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 94 ~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl 161 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHA---------SETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKI 161 (289)
T ss_dssp CEEEEECCCEEEHHHHHTT---------C---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEE
T ss_pred cEEEEEecCCCcHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEE
Confidence 7999999999999999853 3456899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+|||+++...............||..|+|||++. +..++.++||||||+++|||++|+.||........ +...+.
T Consensus 162 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~- 239 (289)
T 3og7_A 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIEMVG- 239 (289)
T ss_dssp CCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-HHHHHH-
T ss_pred ccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-HHHHhc-
Confidence 9999998654433233333456899999999986 56788999999999999999999999976322211 111100
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
...+.... .. ....+...+.+++.+||+.+|++|||+.||++.|+.+.
T Consensus 240 ----------~~~~~~~~--------------~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 240 ----------RGSLSPDL--------------SK----VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp ----------HTSCCCCT--------------TS----SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ----------ccccCcch--------------hh----ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 00000000 00 00012345889999999999999999999999999863
No 56
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.6e-39 Score=352.04 Aligned_cols=272 Identities=21% Similarity=0.293 Sum_probs=210.0
Q ss_pred hcCCCcceeecccCceEEEEEEE-----cCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGIL-----FEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~-----~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~ 231 (873)
.++|.+.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|+++++++ +||||+++++++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~----- 96 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC----- 96 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE-----
Confidence 46789999999999999999986 34678999999975433 2346799999999999 999999999996
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccc--------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEED--------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKP 303 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~--------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKp 303 (873)
...+..++||||+++|+|.+++....... ........+++..++.++.||+.||+||| +.+|+||||||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp 173 (313)
T 1t46_A 97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAA 173 (313)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCcc
Confidence 44567899999999999999996411000 00011235899999999999999999999 88999999999
Q ss_pred CCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccc
Q 002857 304 SNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFK 382 (873)
Q Consensus 304 sNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~ 382 (873)
+|||++.++.+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||+| |+.||.....
T Consensus 174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 253 (313)
T 1t46_A 174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 253 (313)
T ss_dssp GGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred ceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence 999999999999999999987655433333334457889999999988899999999999999999999 9999976322
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
.. .....+...... +... .....+.+++.+||+.||++|||+.||+
T Consensus 254 ~~-------------~~~~~~~~~~~~--------------~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~ell 299 (313)
T 1t46_A 254 DS-------------KFYKMIKEGFRM--------------LSPE-------HAPAEMYDIMKTCWDADPLKRPTFKQIV 299 (313)
T ss_dssp SH-------------HHHHHHHHTCCC--------------CCCT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred hh-------------HHHHHhccCCCC--------------CCcc-------cCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 11 111111111000 0000 0123478899999999999999999999
Q ss_pred HHHHHHHHhh
Q 002857 463 LGLRLIKKKL 472 (873)
Q Consensus 463 ~~Le~i~~~l 472 (873)
+.|+.+....
T Consensus 300 ~~L~~~~~~~ 309 (313)
T 1t46_A 300 QLIEKQISES 309 (313)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999886643
No 57
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-39 Score=353.61 Aligned_cols=270 Identities=22% Similarity=0.366 Sum_probs=208.7
Q ss_pred hcCCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeeccccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~ 232 (873)
.++|.+.+.||+|+||.||+|.+. .+++.||||+++... ....+.+.+|++++++++||||+++++++ .
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~ 96 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-----S 96 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----C
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE-----e
Confidence 567899999999999999999873 355899999997443 23346789999999999999999999996 4
Q ss_pred CCceEEEEEeecCCCChhhhcccccccc--------------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeee
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEED--------------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAH 298 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~--------------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvH 298 (873)
..+..++||||+++|+|.+++....... ........+++.+++.|+.||+.||+||| +.+|+|
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH 173 (314)
T 2ivs_A 97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVH 173 (314)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcc
Confidence 4567899999999999999996411100 00012245889999999999999999999 889999
Q ss_pred ccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCC
Q 002857 299 CDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPS 377 (873)
Q Consensus 299 rDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf 377 (873)
|||||+|||++.++.+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||+| |+.||
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred cccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999987654433333334457889999999998889999999999999999999 99999
Q ss_pred CcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCC
Q 002857 378 DDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMK 457 (873)
Q Consensus 378 ~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPT 457 (873)
....... +.+.+...... ..+. .+...+.+++.+||+.||++|||
T Consensus 254 ~~~~~~~--------------~~~~~~~~~~~------------~~~~---------~~~~~~~~li~~~l~~dp~~Rps 298 (314)
T 2ivs_A 254 PGIPPER--------------LFNLLKTGHRM------------ERPD---------NCSEEMYRLMLQCWKQEPDKRPV 298 (314)
T ss_dssp TTCCGGG--------------HHHHHHTTCCC------------CCCT---------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCCHHH--------------HHHHhhcCCcC------------CCCc---------cCCHHHHHHHHHHccCChhhCcC
Confidence 7532211 11111100000 0000 11235788999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 002857 458 INDVELGLRLIKKK 471 (873)
Q Consensus 458 m~EVl~~Le~i~~~ 471 (873)
+.||++.|+.+..+
T Consensus 299 ~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 299 FADISKDLEKMMVK 312 (314)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998653
No 58
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=350.37 Aligned_cols=283 Identities=21% Similarity=0.246 Sum_probs=207.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|.+.++||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ......
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec---CCCceE
Confidence 357899999999999999999999889999999997433 2345678899999999999999999998642 234478
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee----CCCCC
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL----NDEMT 313 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL----d~~~~ 313 (873)
++||||+++|+|.+++... .....+++.+++.|+.||+.||+||| +.+|+||||||+|||+ +.++.
T Consensus 85 ~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~ 154 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEP-------SNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSV 154 (319)
T ss_dssp EEEEECCTTCBHHHHHHSG-------GGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEE
T ss_pred EEEEeCCCCCCHHHHHHHh-------ccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCce
Confidence 9999999999999999531 12334899999999999999999999 8999999999999999 78888
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccC--------CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccch
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM--------GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNL 385 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~--------~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~ 385 (873)
+||+|||+++....... .....||..|+|||++. +..++.++||||||+++|||+||+.||........
T Consensus 155 ~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 231 (319)
T 4euu_A 155 YKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231 (319)
T ss_dssp EEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG
T ss_pred EEEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch
Confidence 99999999987644322 22346899999999875 57889999999999999999999999965322111
Q ss_pred --hh-HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 386 --NL-QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 386 --~l-~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
.. ...........+..+ .........+ ....+... .........+.+++.+||+.||++|||+.|++
T Consensus 232 ~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~------~~~~~~~~---~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell 301 (319)
T 4euu_A 232 NKEVMYKIITGKPSGAISGV-QKAENGPIDW------SGDMPVSC---SLSRGLQVLLTPVLANILEADQEKCWGFDQFF 301 (319)
T ss_dssp CHHHHHHHHHHCCTTCCEEE-ECSTTCCEEE------ESSCCTTC---SSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHH
T ss_pred hHHHHHHHhcCCCcccchhh-hcccCCcccc------CccCCccc---ccchhHHHHhHHHHHHhccCChhhhccHHHhh
Confidence 11 111100000000000 0000000000 00001000 11123345688999999999999999999999
Q ss_pred HHHHH
Q 002857 463 LGLRL 467 (873)
Q Consensus 463 ~~Le~ 467 (873)
+....
T Consensus 302 ~h~~d 306 (319)
T 4euu_A 302 AETSD 306 (319)
T ss_dssp HHHHH
T ss_pred hccHH
Confidence 88775
No 59
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.3e-39 Score=353.29 Aligned_cols=282 Identities=20% Similarity=0.271 Sum_probs=214.7
Q ss_pred cCHHHHHHhhcCCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceee
Q 002857 150 VSYEALYSATKGFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKV 222 (873)
Q Consensus 150 ~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~l 222 (873)
+.........++|.+.+.||+|+||.||+|++. .+++.||||+++.... ...+.+.+|++++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 344555556789999999999999999999863 4568999999975433 2345789999999999 79999999
Q ss_pred eeeeecccccCCceEEEEEeecCCCChhhhcccccccccc------cCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCe
Q 002857 223 VTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKR------HKAPGNLNSLERLNIAIDVASALEYLHLGCKPPI 296 (873)
Q Consensus 223 lg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~------~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gI 296 (873)
++++. ..+...++||||+++|+|.+++......... ......+++..++.++.||+.||.||| +.+|
T Consensus 97 ~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i 169 (316)
T 2xir_A 97 LGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKC 169 (316)
T ss_dssp EEEEC----CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTC
T ss_pred EEEEe----cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 99974 3345589999999999999999641110000 001233899999999999999999999 8899
Q ss_pred eeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCC
Q 002857 297 AHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLR 375 (873)
Q Consensus 297 vHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~ 375 (873)
+||||||+|||++.++.+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||+| |+.
T Consensus 170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~ 249 (316)
T 2xir_A 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249 (316)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999987654433333334567899999999998999999999999999999998 999
Q ss_pred CCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCC
Q 002857 376 PSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGER 455 (873)
Q Consensus 376 Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eR 455 (873)
||........ +. ..+...... ..+. .....+.+++.+||+.||++|
T Consensus 250 p~~~~~~~~~-~~------------~~~~~~~~~------------~~~~---------~~~~~l~~li~~~l~~dp~~R 295 (316)
T 2xir_A 250 PYPGVKIDEE-FC------------RRLKEGTRM------------RAPD---------YTTPEMYQTMLDCWHGEPSQR 295 (316)
T ss_dssp SSTTCCCSHH-HH------------HHHHHTCCC------------CCCT---------TCCHHHHHHHHHHTCSSGGGS
T ss_pred CCcccchhHH-HH------------HHhccCccC------------CCCC---------CCCHHHHHHHHHHcCCChhhC
Confidence 9975322111 00 000000000 0000 012247789999999999999
Q ss_pred CCHHHHHHHHHHHHHhh
Q 002857 456 MKINDVELGLRLIKKKL 472 (873)
Q Consensus 456 PTm~EVl~~Le~i~~~l 472 (873)
||+.||++.|+.+.+..
T Consensus 296 ps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 296 PTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhh
Confidence 99999999999987654
No 60
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.1e-39 Score=371.31 Aligned_cols=255 Identities=24% Similarity=0.353 Sum_probs=204.2
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
..++|++.+.||+|+||.||+|.+ .++.||||+++... ..+.|.+|+++|++++||||+++++++. ......
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~ 262 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGL 262 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEE----CTTSCE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEE----cCCCce
Confidence 346788899999999999999988 46799999997543 4578999999999999999999999974 334468
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
+|||||+++|+|.++++. .....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 263 ~iv~e~~~~g~L~~~l~~--------~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~ 331 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRS--------RGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVS 331 (450)
T ss_dssp EEEEECCTTCBHHHHHHH--------HCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecCCCcHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEe
Confidence 999999999999999953 22345788999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+++...... ....++..|+|||++.+..++.++||||||+++|||+| |+.||....... ...
T Consensus 332 DfG~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~------- 397 (450)
T 1k9a_A 332 DFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVP------- 397 (450)
T ss_dssp CCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHH-------
T ss_pred eCCCcccccccc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH-------
Confidence 999998543211 12247889999999999999999999999999999999 999997632211 000
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHh
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKK 471 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~ 471 (873)
.+... .. .+.. ..+...+.+|+.+||+.||++|||+.+|++.|+.++..
T Consensus 398 ----~i~~~-~~--------------~~~p-------~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 398 ----RVEKG-YK--------------MDAP-------DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp ----HHHTT-CC--------------CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ----HHHcC-CC--------------CCCC-------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 01000 00 0000 01234588999999999999999999999999998654
No 61
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-39 Score=357.53 Aligned_cols=272 Identities=21% Similarity=0.313 Sum_probs=206.3
Q ss_pred hhcCCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeecc-CCcchhHHHHHHHHHHhh-hhccceeeeeeeeccc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFL-HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVD 230 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~ 230 (873)
..++|.+.+.||+|+||.||+|++. .++..||||+++.. .....+.+.+|+.+++++ +||||+++++++
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~---- 118 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC---- 118 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE----
Confidence 3568899999999999999999973 35668999999743 233457899999999999 899999999996
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccc-------------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCee
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEED-------------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIA 297 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~-------------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIv 297 (873)
...+..++||||+++|+|.+++....... ........+++..++.|+.||+.||+||| +.+|+
T Consensus 119 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iv 194 (344)
T 1rjb_A 119 -TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCV 194 (344)
T ss_dssp -CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred -eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 34567899999999999999996411000 00011234899999999999999999999 89999
Q ss_pred eccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCC
Q 002857 298 HCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRP 376 (873)
Q Consensus 298 HrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~P 376 (873)
||||||+|||++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||+| |..|
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 274 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999987655443333344557889999999988899999999999999999998 9999
Q ss_pred CCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC
Q 002857 377 SDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM 456 (873)
Q Consensus 377 f~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP 456 (873)
|....... . +..++....... .+. .+...+.+++.+||+.||.+||
T Consensus 275 ~~~~~~~~-~------------~~~~~~~~~~~~------------~~~---------~~~~~l~~li~~~l~~dp~~Rp 320 (344)
T 1rjb_A 275 YPGIPVDA-N------------FYKLIQNGFKMD------------QPF---------YATEEIYIIMQSCWAFDSRKRP 320 (344)
T ss_dssp STTCCCSH-H------------HHHHHHTTCCCC------------CCT---------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred cccCCcHH-H------------HHHHHhcCCCCC------------CCC---------CCCHHHHHHHHHHcCCCchhCc
Confidence 97632211 1 111111100000 000 0123478899999999999999
Q ss_pred CHHHHHHHHHHHHHh
Q 002857 457 KINDVELGLRLIKKK 471 (873)
Q Consensus 457 Tm~EVl~~Le~i~~~ 471 (873)
|+.||++.|+.+...
T Consensus 321 s~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 321 SFPNLTSFLGCQLAD 335 (344)
T ss_dssp CHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999987543
No 62
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-39 Score=355.71 Aligned_cols=253 Identities=20% Similarity=0.272 Sum_probs=203.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|.+.+.||+|+||.||+|++..+++.||+|++... ......+.+|+.+++.++||||+++++++ ...+..+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESF-----ESMEELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEE-----EETTEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEE-----ecCCEEE
Confidence 57899999999999999999999999999999998743 23346788999999999999999999996 4466799
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC--CCCeEE
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND--EMTACV 316 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~--~~~vKL 316 (873)
+||||+++|+|.+++.. ....+++.+++.++.||+.||.||| +.+|+||||||+|||++. ++.+||
T Consensus 78 lv~e~~~g~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl 145 (321)
T 1tki_A 78 MIFEFISGLDIFERINT---------SAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKI 145 (321)
T ss_dssp EEECCCCCCBHHHHHTS---------SSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEEeCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEE
Confidence 99999999999999842 3346899999999999999999999 899999999999999987 789999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|..||....... .
T Consensus 146 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~--------- 211 (321)
T 1tki_A 146 IEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ--I--------- 211 (321)
T ss_dssp CCCTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--H---------
T ss_pred EECCCCeECCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH--H---------
Confidence 9999998764332 2233568999999999999889999999999999999999999997532111 0
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
+..+........ ..........+.+++.+||+.||++|||+.|+++.
T Consensus 212 --~~~i~~~~~~~~-------------------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 212 --IENIMNAEYTFD-------------------EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --HHHHHHTCCCCC-------------------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --HHHHHcCCCCCC-------------------hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111110000 00001113357889999999999999999999873
No 63
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.6e-38 Score=341.50 Aligned_cols=270 Identities=20% Similarity=0.285 Sum_probs=211.7
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
..++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.++++++|++++..+.++. ......
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~ 80 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYN 80 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEE----EETTEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCcccccc----CCCCce
Confidence 3578999999999999999999998899999999987443 2357899999999999999888887763 346678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee---CCCCCe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL---NDEMTA 314 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL---d~~~~v 314 (873)
++||||+ +++|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||+ +.++.+
T Consensus 81 ~lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~ 147 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNF---------CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLV 147 (296)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCE
T ss_pred EEEEEec-CCCHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeE
Confidence 9999999 9999999852 2346899999999999999999999 8999999999999999 488899
Q ss_pred EEeccccccccccccccc-----cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHH
Q 002857 315 CVADFGIARFLEATNEQT-----SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~-----~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~ 389 (873)
||+|||+++......... ......||..|+|||++.+..++.++||||||+++|||++|+.||.........
T Consensus 148 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--- 224 (296)
T 3uzp_A 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--- 224 (296)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS---
T ss_pred EEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh---
Confidence 999999998765433211 123456999999999999999999999999999999999999999763221100
Q ss_pred HHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 390 WVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 390 ~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
..+..+....+..... .....+...+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 225 -------~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 225 -------QKYERISEKKMSTPIE------------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp -------SHHHHHHHHHHHSCHH------------------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred -------hhhhhhcccccCCchH------------------HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 0111111111100000 000011235889999999999999999999999999987
Q ss_pred Hhhhc
Q 002857 470 KKLLE 474 (873)
Q Consensus 470 ~~l~~ 474 (873)
.....
T Consensus 280 ~~~~~ 284 (296)
T 3uzp_A 280 HRQGF 284 (296)
T ss_dssp HHTTC
T ss_pred HhcCC
Confidence 76643
No 64
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-39 Score=350.38 Aligned_cols=282 Identities=27% Similarity=0.360 Sum_probs=200.4
Q ss_pred HHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh--hhccceeeeeeeeccccc
Q 002857 155 LYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI--IHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 155 l~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L--~HpNIV~llg~c~~~~~~ 232 (873)
-....++|++.+.||+|+||.||+|++ .++.||||++... ....+..|.+++..+ +|+||+++++++.... .
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~ 105 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGT-G 105 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-G
T ss_pred ccccccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-C
Confidence 334457899999999999999999987 4889999998632 234556666666655 8999999999975321 1
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC--------CeeeccCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP--------PIAHCDIKPS 304 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~--------gIvHrDLKps 304 (873)
.....++||||+++|+|.++++. ..+++..++.|+.|++.||+||| +. +|+||||||+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~ 171 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKS-----------TTLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSK 171 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGG
T ss_pred CCCceEEEEeccCCCcHHHHhhc-----------cCCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchH
Confidence 22678999999999999999942 25899999999999999999999 67 9999999999
Q ss_pred CeeeCCCCCeEEeccccccccccccccc--cccccccccccCCCcccCCCCCCcc------hhhHhHHHHHHHHHhCCCC
Q 002857 305 NILLNDEMTACVADFGIARFLEATNEQT--SSIGVKGTTGYIAPEYGMGHETSSY------GDVYSFGILLLEMFTGLRP 376 (873)
Q Consensus 305 NILLd~~~~vKLsDFGla~~~~~~~~~~--~~~~~~Gt~~Y~APE~l~~~~~s~k------sDVwSfGvvL~ELlTGk~P 376 (873)
|||++.++.+||+|||+++.+....... ......||..|+|||++.+...+.+ +|||||||++|||+||..|
T Consensus 172 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~ 251 (337)
T 3mdy_A 172 NILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVS 251 (337)
T ss_dssp GEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred HEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCc
Confidence 9999999999999999997654332211 1123469999999999988766655 9999999999999999544
Q ss_pred CCcccccchhhHHHHhhcCc-hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCC
Q 002857 377 SDDMFKDNLNLQNWVQSALP-ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGER 455 (873)
Q Consensus 377 f~~~~~~~~~l~~~~~~~~~-~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eR 455 (873)
+.........+......... ....+.+.. .. ..+.... .....++...+.+++.+||+.||++|
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~-----------~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~R 316 (337)
T 3mdy_A 252 GGIVEEYQLPYHDLVPSDPSYEDMREIVCI---KK-----------LRPSFPN-RWSSDECLRQMGKLMTECWAHNPASR 316 (337)
T ss_dssp TTBCCCCCCTTTTTSCSSCCHHHHHHHHTT---SC-----------CCCCCCG-GGGGSHHHHHHHHHHHHHSCSSGGGS
T ss_pred ccccccccccHhhhcCCCCchhhhHHHHhh---hc-----------cCccccc-cchhhHHHHHHHHHHHHhhhhChhhC
Confidence 43211111100000000000 011111100 00 0010000 00112456678999999999999999
Q ss_pred CCHHHHHHHHHHHHHh
Q 002857 456 MKINDVELGLRLIKKK 471 (873)
Q Consensus 456 PTm~EVl~~Le~i~~~ 471 (873)
||+.||++.|+.+.+.
T Consensus 317 ps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 317 LTALRVKKTLAKMSES 332 (337)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhh
Confidence 9999999999998664
No 65
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.3e-39 Score=345.84 Aligned_cols=257 Identities=25% Similarity=0.388 Sum_probs=205.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||+|+||.||+|.+. ++..||||+++.... ..+.+.+|++++.+++||||+++++++ ......+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVC-----SKEYPIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCceE
Confidence 467899999999999999999874 567899999975433 346799999999999999999999996 4566789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 80 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~D 147 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRS---------HGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSD 147 (268)
T ss_dssp EEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECC
T ss_pred EEEEccCCCcHHHHHHH---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEcc
Confidence 99999999999999953 2345899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||+++....... .......+|..|+|||++.+..++.++||||||+++|||+| |+.||........
T Consensus 148 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------------ 214 (268)
T 3sxs_A 148 FGMTRYVLDDQY-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV------------ 214 (268)
T ss_dssp TTCEEECCTTCE-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH------------
T ss_pred Cccceecchhhh-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH------------
Confidence 999986644322 22233446778999999988889999999999999999999 9999975321110
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
...+..... ...|.. ....+.+++..||+.+|++|||+.||++.|+.+++
T Consensus 215 -~~~~~~~~~-------------~~~~~~---------~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 215 -VLKVSQGHR-------------LYRPHL---------ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp -HHHHHTTCC-------------CCCCTT---------SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred -HHHHHcCCC-------------CCCCCc---------ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 000000000 000000 12247789999999999999999999999998754
No 66
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.1e-39 Score=350.79 Aligned_cols=258 Identities=21% Similarity=0.319 Sum_probs=196.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccc------
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY------ 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~------ 231 (873)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+++|++++||||+++++++.....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 357899999999999999999998899999999997543 3345779999999999999999999998754210
Q ss_pred ----------------------------------------------cCCceEEEEEeecCCCChhhhcccccccccccCC
Q 002857 232 ----------------------------------------------QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKA 265 (873)
Q Consensus 232 ----------------------------------------------~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~ 265 (873)
......++||||+++|+|.+++... ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-------~~ 157 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR-------CS 157 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC-------CS
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc-------cC
Confidence 1122489999999999999999531 12
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccccccccc----------cccc
Q 002857 266 PGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQ----------TSSI 335 (873)
Q Consensus 266 ~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~----------~~~~ 335 (873)
....++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++........ ....
T Consensus 158 ~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T 3qd2_B 158 LEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHT 234 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCC
T ss_pred ccchhhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccccccccccccc
Confidence 233456678999999999999999 899999999999999999999999999999876543211 1123
Q ss_pred ccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHH
Q 002857 336 GVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEE 415 (873)
Q Consensus 336 ~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~ 415 (873)
...||..|+|||++.+..++.++||||||+++|||++|..|+... ... ...+....+.
T Consensus 235 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----~~~-----------~~~~~~~~~~------- 292 (332)
T 3qd2_B 235 GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----VRI-----------ITDVRNLKFP------- 292 (332)
T ss_dssp SCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----HHH-----------HHHHHTTCCC-------
T ss_pred ccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----HHH-----------HHHhhccCCC-------
Confidence 346999999999999999999999999999999999987664221 000 0000000000
Q ss_pred HHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 416 TVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 416 ~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.........+.+++.+||+.||++|||+.|+++
T Consensus 293 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 293 ---------------LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp ---------------HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred ---------------cccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 001112334678999999999999999999875
No 67
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.7e-39 Score=352.97 Aligned_cols=276 Identities=24% Similarity=0.392 Sum_probs=201.5
Q ss_pred HHHhhcCCCcceeecccCceEEEEEEEcC---CCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecc
Q 002857 155 LYSATKGFSSENLIGAGNFASVYKGILFE---GAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRV 229 (873)
Q Consensus 155 l~~at~~f~~~~~LG~G~fG~VYkg~~~~---~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~ 229 (873)
+....++|.+.+.||+|+||.||+|.+.. ++..||||+++.... ...+.+.+|+.++++++||||+++++++...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 33456788999999999999999998765 345899999874432 2346789999999999999999999997643
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
........++||||+++|+|.+++... ........+++..++.|+.||+.||.||| +.+|+||||||+|||++
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~ 181 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYS----RLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLR 181 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHT----TBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEEC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHh----hhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEc
Confidence 322233569999999999999998431 11123467999999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhH
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~ 388 (873)
.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||....... ..
T Consensus 182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~ 259 (313)
T 3brb_A 182 DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MY 259 (313)
T ss_dssp TTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HH
T ss_pred CCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HH
Confidence 999999999999987654332223333457889999999999999999999999999999999 888986532211 11
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
. .+...... +.. ..+...+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 260 ~-----------~~~~~~~~---------------~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 260 D-----------YLLHGHRL---------------KQP-------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306 (313)
T ss_dssp H-----------HHHTTCCC---------------CCB-------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred H-----------HHHcCCCC---------------CCC-------ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 01100000 000 01123578899999999999999999999999998
Q ss_pred HHhh
Q 002857 469 KKKL 472 (873)
Q Consensus 469 ~~~l 472 (873)
.+.+
T Consensus 307 ~~~l 310 (313)
T 3brb_A 307 LESL 310 (313)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 7755
No 68
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.4e-39 Score=340.56 Aligned_cols=254 Identities=22% Similarity=0.338 Sum_probs=203.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|+.++++++||||+++++++ ...+..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 80 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNIQ 80 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEE-----EcCCEE
Confidence 357899999999999999999998899999999987433 33457789999999999999999999986 345678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++++|.+++. ....+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 81 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~ 147 (276)
T 2yex_A 81 YLFLEYCSGGELFDRIE----------PDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKIS 147 (276)
T ss_dssp EEEEECCTTEEGGGGSB----------TTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEecCCCcHHHHHh----------hccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEe
Confidence 99999999999999984 2456899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||++................||..|+|||++.+..+ +.++||||||+++|||++|+.||.........+..+.....
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 226 (276)
T 2yex_A 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT- 226 (276)
T ss_dssp CCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT-
T ss_pred eCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc-
Confidence 9999986644332222334568999999999988765 77899999999999999999999764332222222111000
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
... ++ . .....+.+++.+||+.||++|||+.||++
T Consensus 227 -----------~~~-------------~~----~----~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 227 -----------YLN-------------PW----K----KIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -----------TST-------------TG----G----GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----------ccC-------------ch----h----hcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 000 00 0 01224778999999999999999998864
No 69
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=359.98 Aligned_cols=272 Identities=24% Similarity=0.363 Sum_probs=211.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcC-------CCcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceeeeeeeecc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFE-------GAPAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKVVTACSRV 229 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~-------~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~ 229 (873)
.++|.+.+.||+|+||.||+|++.. .+..||||+++.... .....+.+|+++++++ +||||+++++++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--- 144 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC--- 144 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee---
Confidence 4678999999999999999998753 235799999975432 2346789999999999 999999999996
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccc------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEED------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKP 303 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKp 303 (873)
...+..++||||+++|+|.+++....... ........+++.+++.|+.||+.||+||| +.+|+||||||
T Consensus 145 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp 219 (382)
T 3tt0_A 145 --TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAA 219 (382)
T ss_dssp --CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred --ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCc
Confidence 44566899999999999999996421100 00112356999999999999999999999 88999999999
Q ss_pred CCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccc
Q 002857 304 SNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFK 382 (873)
Q Consensus 304 sNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~ 382 (873)
+|||++.++.+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||+| |..||.....
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654433333344557889999999999999999999999999999999 9999865321
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
.. + .+.+....... .+. .+...+.+++.+||+.||++|||+.||+
T Consensus 300 ~~--~------------~~~~~~~~~~~------------~~~---------~~~~~l~~li~~~l~~dP~~Rps~~ell 344 (382)
T 3tt0_A 300 EE--L------------FKLLKEGHRMD------------KPS---------NCTNELYMMMRDCWHAVPSQRPTFKQLV 344 (382)
T ss_dssp HH--H------------HHHHHTTCCCC------------CCS---------SCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HH--H------------HHHHHcCCCCC------------CCc---------cCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 11 1 11111000000 000 1123578899999999999999999999
Q ss_pred HHHHHHHHhhh
Q 002857 463 LGLRLIKKKLL 473 (873)
Q Consensus 463 ~~Le~i~~~l~ 473 (873)
+.|+.+.....
T Consensus 345 ~~L~~~~~~~~ 355 (382)
T 3tt0_A 345 EDLDRIVALTS 355 (382)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHHHh
Confidence 99999876554
No 70
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.1e-39 Score=358.05 Aligned_cols=249 Identities=21% Similarity=0.275 Sum_probs=201.4
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|++.+.||+|+||.||+|+...+++.||||+++.. .......+.+|+.+|+.++||||+++++++ ...+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-----~~~~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHD 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE-----ECSS
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEE-----EeCC
Confidence 36799999999999999999999989999999999743 233456789999999999999999999985 4567
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++++|
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vk 145 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSR----------ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIK 145 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHH----------HSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEE
Confidence 89999999999999999842 346889999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 146 L~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------------ 211 (337)
T 1o6l_A 146 ITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------------ 211 (337)
T ss_dssp ECCCTTCBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------------
T ss_pred EeeccchhhcccCC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH------------
Confidence 99999998543222 1223456999999999999999999999999999999999999999652111
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-----CHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-----KINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-----Tm~EVl~ 463 (873)
++....+.... ..|. .....+.+++.+||+.||++|| ++.||++
T Consensus 212 -----~~~~~i~~~~~----------~~p~---------~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 212 -----RLFELILMEEI----------RFPR---------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -----HHHHHHHHCCC----------CCCT---------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -----HHHHHHHcCCC----------CCCC---------CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 01111110000 0010 0122477899999999999999 8888865
No 71
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=348.48 Aligned_cols=282 Identities=21% Similarity=0.226 Sum_probs=201.3
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-----CcchhHHHHHHHHHHhhh---hccceeeeeeeecc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-----HDASKSFTVECEVMRNII---HRKIIKVVTACSRV 229 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-----~~~~~~f~~Ei~iL~~L~---HpNIV~llg~c~~~ 229 (873)
.+++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4679999999999999999999998899999999987432 122356788988888876 99999999998643
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
........++||||+. |+|.+++.. .....+++.+++.|+.||+.||+||| +.+|+||||||+|||++
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~--------~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~ 154 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDK--------APPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVT 154 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHT--------CCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhh--------ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEc
Confidence 3222336899999996 599999853 23345999999999999999999999 88999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHH
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~ 389 (873)
.++.+||+|||+++...... ......||..|+|||++.+..++.++||||||+++|||++|+.||........ +..
T Consensus 155 ~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~ 230 (308)
T 3g33_A 155 SGGTVKLADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGK 230 (308)
T ss_dssp TTSCEEECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH-HHH
T ss_pred CCCCEEEeeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH
Confidence 99999999999998664322 22345689999999999999999999999999999999999999976322211 111
Q ss_pred HHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 390 WVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 390 ~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
............+.. ... ... ..+.. ...........+....+.+++.+||+.||++|||+.|+++
T Consensus 231 i~~~~~~~~~~~~~~-~~~-~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 231 IFDLIGLPPEDDWPR-DVS-LPR-----GAFPP-RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHCCCCTTTSCS-SCS-SCG-----GGSCC-CCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhCCCChhhccc-hhh-ccc-----cccCC-CCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 110000000000000 000 000 00000 0000001111122345789999999999999999999864
No 72
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.1e-39 Score=344.57 Aligned_cols=258 Identities=26% Similarity=0.396 Sum_probs=203.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||+|+||.||+|.+. ++..||||+++.... ..+.+.+|++++.+++|+||+++++++ ......+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 95 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQRPIF 95 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEE-----ecCCCeE
Confidence 467889999999999999999874 677899999975433 347799999999999999999999996 4566789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++|+|.+++.. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 96 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~D 163 (283)
T 3gen_A 96 IITEYMANGCLLNYLRE---------MRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSD 163 (283)
T ss_dssp EEECCCTTCBHHHHHHC---------GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECS
T ss_pred EEEeccCCCcHHHHHHH---------hccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcc
Confidence 99999999999999953 2345899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||+++....... .......+|..|+|||++.+..++.++||||||+++|||+| |+.||....... ..
T Consensus 164 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~--~~--------- 231 (283)
T 3gen_A 164 FGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TA--------- 231 (283)
T ss_dssp TTGGGGBCCHHH-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HH---------
T ss_pred cccccccccccc-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH--HH---------
Confidence 999986543221 12223446788999999998899999999999999999999 999997532111 00
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHh
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKK 471 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~ 471 (873)
..+... ... ..+. . ....+.+++.+||+.+|++|||+.||++.|+.+.+.
T Consensus 232 --~~~~~~-~~~------------~~~~--~-------~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 232 --EHIAQG-LRL------------YRPH--L-------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp --HHHHTT-CCC------------CCCT--T-------CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HHHhcc-cCC------------CCCC--c-------CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 011000 000 0000 0 022477899999999999999999999999988653
No 73
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.2e-39 Score=351.56 Aligned_cols=274 Identities=23% Similarity=0.376 Sum_probs=205.6
Q ss_pred cCCCcceeecccCceEEEEEEE----cCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGIL----FEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~----~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
+.|++.+.||+|+||.||+|++ ..+++.||||+++... ....+.+.+|++++++++|+||+++++++.. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCC
Confidence 4588899999999999999984 5678999999997433 3344789999999999999999999999753 223
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++|+|.+++.. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~ 165 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPK---------NKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQV 165 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHH---------HTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEE
T ss_pred ceEEEEEEeCCCCcHHHHHHh---------ccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCE
Confidence 568999999999999999943 2345899999999999999999999 8999999999999999999999
Q ss_pred EEecccccccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++........ .......+|..|+|||++.+..++.++||||||+++|||+||..|+...... .......
T Consensus 166 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~ 242 (302)
T 4e5w_A 166 KIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGP 242 (302)
T ss_dssp EECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCS
T ss_pred EECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCC
Confidence 99999999876543321 2223345888899999999999999999999999999999999986542111 1111111
Q ss_pred cCch-hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 394 ALPE-RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 394 ~~~~-~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
.... ....+....... ...+... .+...+.+++.+||+.||++|||+.||++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~-----------~~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 243 THGQMTVTRLVNTLKEG-----------KRLPCPP-------NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCGGGHHHHHHHHHHTT-----------CCCCCCT-------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHhcc-----------CCCCCCC-------CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1111 111111111000 0011100 11235889999999999999999999999999874
No 74
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.7e-39 Score=378.13 Aligned_cols=258 Identities=25% Similarity=0.421 Sum_probs=208.5
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
..++|++.+.||+|+||.||+|++..++..||||+++... ...+.|.+|+.+|++++||||++++++| ......
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~-----~~~~~~ 291 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPF 291 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSC
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEE-----ecCCcE
Confidence 3467888999999999999999998889999999997543 3457899999999999999999999997 345568
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
+|||||+++|+|.++|+. .....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 292 ~lv~E~~~~g~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~ 360 (495)
T 1opk_A 292 YIITEFMTYGNLLDYLRE--------CNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVA 360 (495)
T ss_dssp EEEEECCTTCBHHHHHHH--------SCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEEC
T ss_pred EEEEEccCCCCHHHHHHh--------cCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEe
Confidence 999999999999999953 23456899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+++...... ........++..|+|||++.+..++.++|||||||++|||+| |+.||.......
T Consensus 361 DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~------------ 427 (495)
T 1opk_A 361 DFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------------ 427 (495)
T ss_dssp CTTCEECCTTCC-EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG------------
T ss_pred ecccceeccCCc-eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH------------
Confidence 999998764322 122223446789999999998899999999999999999999 999997532111
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
+.+.+....... .| ..+...+.+|+.+||+.||++||||.+|++.|+.+
T Consensus 428 --~~~~~~~~~~~~------------~~---------~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 428 --VYELLEKDYRME------------RP---------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp --HHHHHHTTCCCC------------CC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred --HHHHHHcCCCCC------------CC---------CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 111111110000 00 01233578899999999999999999999999875
No 75
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.9e-40 Score=358.34 Aligned_cols=275 Identities=19% Similarity=0.322 Sum_probs=211.5
Q ss_pred HHHHHhhcCCCcceeecccCceEEEEEEEc-----CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeee
Q 002857 153 EALYSATKGFSSENLIGAGNFASVYKGILF-----EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTAC 226 (873)
Q Consensus 153 ~el~~at~~f~~~~~LG~G~fG~VYkg~~~-----~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c 226 (873)
++.....++|.+.+.||+|+||.||+|++. .+++.||||++..... .....+.+|++++++++|+||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344556788999999999999999999876 3467899999874432 2345689999999999999999999996
Q ss_pred ecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCe
Q 002857 227 SRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNI 306 (873)
Q Consensus 227 ~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNI 306 (873)
......++||||+++|+|.+++...............+++..++.|+.||+.||+||| +.+|+||||||+||
T Consensus 98 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NI 169 (322)
T 1p4o_A 98 -----SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNC 169 (322)
T ss_dssp -----CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGE
T ss_pred -----ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceE
Confidence 4456789999999999999999642211111122356789999999999999999999 88999999999999
Q ss_pred eeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccch
Q 002857 307 LLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNL 385 (873)
Q Consensus 307 LLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~ 385 (873)
|++.++.+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||+| |+.||.......
T Consensus 170 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~- 248 (322)
T 1p4o_A 170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ- 248 (322)
T ss_dssp EECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-
T ss_pred EEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH-
Confidence 999999999999999986644332222333457889999999998899999999999999999999 899986532111
Q ss_pred hhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 386 NLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 386 ~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
.. ..+....+.. .+. .+...+.+++.+||+.||++|||+.||++.|
T Consensus 249 -~~-----------~~~~~~~~~~-------------~~~---------~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L 294 (322)
T 1p4o_A 249 -VL-----------RFVMEGGLLD-------------KPD---------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294 (322)
T ss_dssp -HH-----------HHHHTTCCCC-------------CCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -HH-----------HHHHcCCcCC-------------CCC---------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 00 0011100000 000 1123478899999999999999999999999
Q ss_pred HHHHH
Q 002857 466 RLIKK 470 (873)
Q Consensus 466 e~i~~ 470 (873)
+.+..
T Consensus 295 ~~~~~ 299 (322)
T 1p4o_A 295 KEEME 299 (322)
T ss_dssp GGGSC
T ss_pred HHhhc
Confidence 87633
No 76
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.2e-39 Score=342.77 Aligned_cols=254 Identities=19% Similarity=0.314 Sum_probs=199.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|.+.+.||+|+||.||+|++ .++.||||+++.... ...+.+.+|+.++++++||||+++++++.. ......
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~~ 84 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---PPAPHP 84 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECT---TTSSSC
T ss_pred HHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEcc---CCCCCe
Confidence 5789999999999999999998 478899999975432 334679999999999999999999999743 223678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC--eeeccCCCCCeeeCCCCCeE
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP--IAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g--IvHrDLKpsNILLd~~~~vK 315 (873)
++||||+++|+|.+++.. .....+++..++.|+.||+.||+||| +.+ |+||||||+|||++.++.++
T Consensus 85 ~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~ 153 (271)
T 3kmu_A 85 TLITHWMPYGSLYNVLHE--------GTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTAR 153 (271)
T ss_dssp EEEEECCTTCBHHHHHHS--------CSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEE
T ss_pred EeeecccCCCcHHHHHhh--------cccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCccee
Confidence 999999999999999953 22346899999999999999999999 778 99999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCc---chhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSS---YGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~---ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
|+|||++..... ....||..|+|||++.+..++. ++||||||+++|||+||+.||........
T Consensus 154 l~~~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------- 219 (271)
T 3kmu_A 154 ISMADVKFSFQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI------- 219 (271)
T ss_dssp EEGGGSCCTTSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-------
T ss_pred EEeccceeeecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-------
Confidence 999988764221 2245899999999988765544 79999999999999999999975322110
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
...+....... +... .+...+.+++..||+.||++|||+.||++.|+.+++
T Consensus 220 ------~~~~~~~~~~~--------------~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 220 ------GMKVALEGLRP--------------TIPP-------GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ------HHHHHHSCCCC--------------CCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ------HHHHHhcCCCC--------------CCCC-------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 00000000000 0000 012347889999999999999999999999998743
No 77
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-39 Score=347.90 Aligned_cols=258 Identities=26% Similarity=0.372 Sum_probs=195.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
++|++.+.||+|+||.||+|++ .++.||||++.. ....+.+.+|++++++++||||+++++++. +..++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~l 76 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVCL 76 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTEE
T ss_pred hHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcEE
Confidence 5788999999999999999987 468899999863 234578999999999999999999999863 23689
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC-eEEec
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT-ACVAD 318 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~-vKLsD 318 (873)
||||+++|+|.++++.. .....+++..++.++.||++||+|||+....+|+||||||+|||++.++. +||+|
T Consensus 77 v~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~D 149 (307)
T 2eva_A 77 VMEYAEGGSLYNVLHGA-------EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149 (307)
T ss_dssp EEECCTTCBHHHHHHCS-------SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECC
T ss_pred EEEcCCCCCHHHHHhcc-------CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcc
Confidence 99999999999999531 11234788899999999999999999321289999999999999998886 79999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchh
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPER 398 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~ 398 (873)
||++...... .....||..|+|||++.+..++.++||||||+++|||+||+.||..............
T Consensus 150 fg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~------- 217 (307)
T 2eva_A 150 FGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV------- 217 (307)
T ss_dssp CCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHH-------
T ss_pred cccccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHH-------
Confidence 9999755322 1233589999999999999999999999999999999999999975322211110000
Q ss_pred HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhh
Q 002857 399 VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLL 473 (873)
Q Consensus 399 l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~ 473 (873)
.... ..+... .+...+.+++.+||+.||++|||+.||++.|+.+...+.
T Consensus 218 ----~~~~---------------~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 218 ----HNGT---------------RPPLIK-------NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp ----HTTC---------------CCCCBT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred ----hcCC---------------CCCccc-------ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0000 000000 112347789999999999999999999999999866553
No 78
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.1e-39 Score=356.44 Aligned_cols=211 Identities=26% Similarity=0.341 Sum_probs=181.7
Q ss_pred CCccCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-----hcccee
Q 002857 147 FPYVSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-----HRKIIK 221 (873)
Q Consensus 147 ~~~~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-----HpNIV~ 221 (873)
...+++++.....++|.+.++||+|+||.||+|++..+++.||||+++.. ......+..|+.+++.++ |+||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 44566666667788999999999999999999999999999999998632 233466788999999996 999999
Q ss_pred eeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccC
Q 002857 222 VVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDI 301 (873)
Q Consensus 222 llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDL 301 (873)
+++++ ...+..+|||||+ +++|.+++.. .....+++..++.|+.||+.||+||| +.+|+||||
T Consensus 101 ~~~~~-----~~~~~~~lv~e~~-~~~L~~~~~~--------~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDl 163 (360)
T 3llt_A 101 YHGKF-----MYYDHMCLIFEPL-GPSLYEIITR--------NNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDL 163 (360)
T ss_dssp EEEEE-----EETTEEEEEECCC-CCBHHHHHHH--------TTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCC
T ss_pred cccee-----eECCeeEEEEcCC-CCCHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCC
Confidence 99986 3456799999999 9999999953 23345899999999999999999999 899999999
Q ss_pred CCCCeeeCC-------------------------CCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCc
Q 002857 302 KPSNILLND-------------------------EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSS 356 (873)
Q Consensus 302 KpsNILLd~-------------------------~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ 356 (873)
||+|||++. ++.+||+|||+++..... .....||..|+|||++.+..++.
T Consensus 164 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~ 238 (360)
T 3llt_A 164 KPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDV 238 (360)
T ss_dssp SGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCT
T ss_pred CcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCC
Confidence 999999975 789999999999864332 12346899999999999999999
Q ss_pred chhhHhHHHHHHHHHhCCCCCCcc
Q 002857 357 YGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 357 ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
++|||||||++|||+||+.||...
T Consensus 239 ~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 239 SSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp THHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccchHHHHHHHHHHHHCCCCCCCC
Confidence 999999999999999999999763
No 79
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.4e-39 Score=347.60 Aligned_cols=200 Identities=23% Similarity=0.342 Sum_probs=170.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|+.++++++||||+++++++ ..+...
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEE-----EeCCEE
Confidence 578999999999999999999999999999999974432 2346788999999999999999999996 446689
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++ +|.+++. .....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 77 ~lv~e~~~~-~l~~~~~---------~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~ 143 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFD---------SCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLA 143 (292)
T ss_dssp EEEEECCSE-EHHHHHH---------HTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCC-CHHHHHH---------hCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEe
Confidence 999999975 6665553 23456899999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCC-CCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE-TSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|||+++...... .......||..|+|||++.+.. ++.++||||||+++|||++|..||..
T Consensus 144 Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~ 204 (292)
T 3o0g_A 144 NFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_dssp CCTTCEECCSCC--SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred ecccceecCCcc--ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC
Confidence 999998664322 2223346899999999988765 79999999999999999999888643
No 80
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=350.26 Aligned_cols=268 Identities=22% Similarity=0.257 Sum_probs=206.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||+|+||.||++....+++.||||++........+.+.+|++++++++||||+++++++.... ......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCceeE
Confidence 467999999999999999999998899999999987655556678999999999999999999999975321 2345789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++|+|.+++... ......+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 107 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~d 177 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERL------KDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMD 177 (317)
T ss_dssp EEEECCTTCBHHHHHHHH------HTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECC
T ss_pred EEEEeCCCCcHHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEe
Confidence 999999999999998531 123567899999999999999999999 88999999999999999999999999
Q ss_pred ccccccccccccc-------ccccccccccccCCCcccCCCC---CCcchhhHhHHHHHHHHHhCCCCCCcccccchhhH
Q 002857 319 FGIARFLEATNEQ-------TSSIGVKGTTGYIAPEYGMGHE---TSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 319 FGla~~~~~~~~~-------~~~~~~~Gt~~Y~APE~l~~~~---~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~ 388 (873)
||+++........ .......||..|+|||++.+.. ++.++||||||+++|||++|+.||...........
T Consensus 178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 257 (317)
T 2buj_A 178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA 257 (317)
T ss_dssp CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH
T ss_pred cCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh
Confidence 9998764322111 0112345799999999987654 68999999999999999999999964221111111
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
. .+.... ..+... .....+.+++.+||+.||++|||+.||++.|+.+
T Consensus 258 ~------------~~~~~~--------------~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~ 304 (317)
T 2buj_A 258 L------------AVQNQL--------------SIPQSP-------RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304 (317)
T ss_dssp H------------HHHCC----------------CCCCT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred H------------HhhccC--------------CCCccc-------cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence 1 000000 001000 0123478899999999999999999999999976
Q ss_pred H
Q 002857 469 K 469 (873)
Q Consensus 469 ~ 469 (873)
.
T Consensus 305 ~ 305 (317)
T 2buj_A 305 Q 305 (317)
T ss_dssp C
T ss_pred C
Confidence 3
No 81
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=9.9e-40 Score=357.78 Aligned_cols=278 Identities=22% Similarity=0.314 Sum_probs=210.3
Q ss_pred cCCCcceeecccCceEEEEEEE----cCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGIL----FEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~----~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++|+||+++++++.. ....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG---PGRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---SSSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec---CCCc
Confidence 5789999999999999999984 56788999999986655556779999999999999999999998642 3456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~k 167 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQR---------HRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVK 167 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEE
T ss_pred eEEEEEeecCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEE
Confidence 78999999999999999953 1235899999999999999999999 89999999999999999999999
Q ss_pred Eecccccccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++........ .......+|..|+|||++.+..++.++||||||+++|||++|+.||.....+.... +....
T Consensus 168 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~--~~~~~ 245 (327)
T 3lxl_A 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM--MGCER 245 (327)
T ss_dssp ECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH--CC---
T ss_pred EcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhh--ccccc
Confidence 9999999876443321 12223457888999999998889999999999999999999999986532211100 00000
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
.......+.+..... ...+... .+...+.+++.+||+.||++|||+.||++.|+.+....
T Consensus 246 ~~~~~~~~~~~~~~~-----------~~~~~~~-------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 246 DVPALSRLLELLEEG-----------QRLPAPP-------ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp -CCHHHHHHHHHHTT-----------CCCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred ccccHHHHHHHhhcc-----------cCCCCCC-------cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 001111111111000 0001100 12345889999999999999999999999999875544
No 82
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.9e-39 Score=347.71 Aligned_cols=264 Identities=25% Similarity=0.407 Sum_probs=213.3
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
...++|++.+.||+|+||.||+|.+..++..||||++... ....+.+.+|++++++++||||+++++++ .....
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~ 83 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPP 83 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSS
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCC
Confidence 3467899999999999999999999888999999999743 33457899999999999999999999996 45667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++++|.+++.. .....+++..++.|+.||+.||+||| +.+|+||||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l 152 (288)
T 3kfa_A 84 FYIITEFMTYGNLLDYLRE--------CNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKV 152 (288)
T ss_dssp EEEEEECCTTEEHHHHHHH--------CCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEEEEcCCCCcHHHHHHh--------cccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEE
Confidence 8999999999999999953 23456899999999999999999999 889999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+++...... ........+|..|+|||++.+..++.++||||||+++|+|++ |..||.......
T Consensus 153 ~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~----------- 220 (288)
T 3kfa_A 153 ADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------- 220 (288)
T ss_dssp CCCCGGGTSCSSS-SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----------
T ss_pred ccCccceeccCCc-cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------
Confidence 9999998764332 222233457889999999998899999999999999999999 999987532111
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhh
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLL 473 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~ 473 (873)
+.+.+....... .+ ..+...+.+++.+||+.||++|||+.||++.|+.+.....
T Consensus 221 ---~~~~~~~~~~~~------------~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 221 ---VYELLEKDYRME------------RP---------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp ---HHHHHHTTCCCC------------CC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHhccCCCC------------CC---------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 111111100000 00 0112357889999999999999999999999999876543
No 83
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=342.53 Aligned_cols=264 Identities=23% Similarity=0.360 Sum_probs=204.2
Q ss_pred CCCcceeecccCceEEEEEEEcCCCc---EEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAP---AVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~---~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.|...++||+|+||.||+|.+..++. .||+|++..... ...+.+.+|+.++++++||||+++++++. ..+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIML----PPEGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----CSSSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEe----cCCCC
Confidence 35566899999999999999765544 799999874333 33467899999999999999999999963 23344
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+.+|+|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl 165 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRS---------PQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKV 165 (298)
T ss_dssp CEEEECCCTTCBHHHHHHC---------TTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEecccCCCHHHHHhc---------cccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEe
Confidence 5899999999999999952 3456899999999999999999999 889999999999999999999999
Q ss_pred ecccccccccccc--ccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 317 ADFGIARFLEATN--EQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 317 sDFGla~~~~~~~--~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
+|||+++...... .........+|..|+|||.+.+..++.++||||||+++|||++|..|+...... ..+...+
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~--- 241 (298)
T 3pls_A 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFL--- 241 (298)
T ss_dssp CCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHH---
T ss_pred CcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHh---
Confidence 9999998654322 112223345789999999999999999999999999999999966664331111 1111111
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhhc
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLLE 474 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~~ 474 (873)
.... ..+... .+...+.+++.+||+.||++|||+.+|++.|+.+.+.+..
T Consensus 242 ---------~~~~--------------~~~~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 242 ---------AQGR--------------RLPQPE-------YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp ---------HTTC--------------CCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred ---------hcCC--------------CCCCCc-------cchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 0000 000000 0123478899999999999999999999999999887753
No 84
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.9e-39 Score=354.30 Aligned_cols=276 Identities=22% Similarity=0.323 Sum_probs=211.7
Q ss_pred HHhhcCCCcceeecccCceEEEEEEEcCCC-----cEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceeeeeeeec
Q 002857 156 YSATKGFSSENLIGAGNFASVYKGILFEGA-----PAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKVVTACSR 228 (873)
Q Consensus 156 ~~at~~f~~~~~LG~G~fG~VYkg~~~~~g-----~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~ 228 (873)
....++|.+.+.||+|+||.||+|.+..++ ..||+|+++.... ...+.+.+|+++++++ +||||+++++++
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-- 119 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC-- 119 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE--
Confidence 344578999999999999999999986654 3799999975432 3446789999999999 899999999996
Q ss_pred ccccCCceEEEEEeecCCCChhhhccccccccc----ccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 002857 229 VDYQGNDFKALVYEFMPNGSLEEWIHPITEEDK----RHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPS 304 (873)
Q Consensus 229 ~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~----~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKps 304 (873)
...+..++||||+++|+|.+++........ .......+++..++.++.||+.||+||| +.+|+||||||+
T Consensus 120 ---~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 193 (333)
T 2i1m_A 120 ---THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAAR 193 (333)
T ss_dssp ---CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGG
T ss_pred ---ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccc
Confidence 445678999999999999999964111000 0001346899999999999999999999 889999999999
Q ss_pred CeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCccccc
Q 002857 305 NILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKD 383 (873)
Q Consensus 305 NILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~ 383 (873)
|||++.++.+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||+| |..||......
T Consensus 194 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 273 (333)
T 2i1m_A 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN 273 (333)
T ss_dssp GCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS
T ss_pred eEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh
Confidence 99999999999999999987654433333334457889999999988899999999999999999999 99998753221
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. .+..++....... .+. .+...+.+++.+||+.||.+|||+.||++
T Consensus 274 ~-------------~~~~~~~~~~~~~------------~~~---------~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 274 S-------------KFYKLVKDGYQMA------------QPA---------FAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp H-------------HHHHHHHHTCCCC------------CCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred H-------------HHHHHHhcCCCCC------------CCC---------CCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 1 1111111110000 000 01234788999999999999999999999
Q ss_pred HHHHHHHhhh
Q 002857 464 GLRLIKKKLL 473 (873)
Q Consensus 464 ~Le~i~~~l~ 473 (873)
.|+.+.....
T Consensus 320 ~L~~~~~~~~ 329 (333)
T 2i1m_A 320 FLQEQAQEDR 329 (333)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 9998876543
No 85
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.7e-39 Score=342.40 Aligned_cols=251 Identities=25% Similarity=0.370 Sum_probs=189.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC----cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH----DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~----~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|++.+.||+|+||.||+|.+ .++.||||+++.... ...+.+.+|+++++.++||||+++++++ ...
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC-----LKE 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCC
T ss_pred hhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----ecC
Confidence 35789999999999999999987 478999999864322 2346789999999999999999999996 445
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC---eeeccCCCCCeeeCC-
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP---IAHCDIKPSNILLND- 310 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g---IvHrDLKpsNILLd~- 310 (873)
+..++||||+++++|.+++. ...+++..++.++.|++.||+||| +.+ |+||||||+|||++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~-----------~~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~ 144 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLS-----------GKRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQK 144 (271)
T ss_dssp --CEEEEECCTTEEHHHHHT-----------SSCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSC
T ss_pred CceEEEEEcCCCCCHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecc
Confidence 67899999999999999983 246899999999999999999999 666 999999999999986
Q ss_pred -------CCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccccc
Q 002857 311 -------EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKD 383 (873)
Q Consensus 311 -------~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~ 383 (873)
++.+||+|||+++...... .....||..|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 145 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 220 (271)
T 3dtc_A 145 VENGDLSNKILKITDFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220 (271)
T ss_dssp CSSSCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH
T ss_pred cccccccCcceEEccCCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 6789999999998654322 12346899999999999889999999999999999999999999753211
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
... ..+...... .+... .+...+.+++.+||+.||++|||+.||++
T Consensus 221 ~~~-------------~~~~~~~~~--------------~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 266 (271)
T 3dtc_A 221 AVA-------------YGVAMNKLA--------------LPIPS-------TCPEPFAKLMEDCWNPDPHSRPSFTNILD 266 (271)
T ss_dssp HHH-------------HHHHTSCCC--------------CCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHH-------------HhhhcCCCC--------------CCCCc-------ccCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 100 000000000 00000 11235788999999999999999999999
Q ss_pred HHHHH
Q 002857 464 GLRLI 468 (873)
Q Consensus 464 ~Le~i 468 (873)
.|+.|
T Consensus 267 ~L~~l 271 (271)
T 3dtc_A 267 QLTTI 271 (271)
T ss_dssp HHHC-
T ss_pred HHhcC
Confidence 99753
No 86
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-38 Score=354.27 Aligned_cols=256 Identities=21% Similarity=0.264 Sum_probs=201.4
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc-----CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL-----HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~-----~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+.++++++||||+++++++ ..
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~ 97 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY-----SS 97 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEE-----Ee
Confidence 35689999999999999999999999999999998632 122356799999999999999999999986 44
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
.+..++||||+++|+|.+++.. .......+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 98 ~~~~~lv~e~~~g~~L~~~l~~------~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~ 168 (351)
T 3c0i_A 98 DGMLYMVFEFMDGADLCFEIVK------RADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKEN 168 (351)
T ss_dssp TTEEEEEEECCSSCBHHHHHHH------HHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSST
T ss_pred CCEEEEEEeCCCCCCHHHHHHH------hcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCC
Confidence 6679999999999999988843 1123445899999999999999999999 899999999999999986554
Q ss_pred ---eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002857 314 ---ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 314 ---vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~ 390 (873)
+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+
T Consensus 169 ~~~vkl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~--- 240 (351)
T 3c0i_A 169 SAPVKLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RL--- 240 (351)
T ss_dssp TCCEEECCCTTCEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HH---
T ss_pred CCcEEEecCcceeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HH---
Confidence 9999999998764432 122335699999999999999999999999999999999999999975211 00
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...+......... .........+.+++.+||+.||++|||+.|+++
T Consensus 241 --------~~~i~~~~~~~~~-------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 241 --------FEGIIKGKYKMNP-------------------RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --------HHHHHHTCCCCCH-------------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --------HHHHHcCCCCCCc-------------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111111100000 000011235788999999999999999999985
No 87
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=355.62 Aligned_cols=270 Identities=20% Similarity=0.236 Sum_probs=198.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcC---CCcEEEEEEeeccCCc-----------chhHHHHHHHHHHhhhhccceeeee
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFE---GAPAVAIKVFNFLHHD-----------ASKSFTVECEVMRNIIHRKIIKVVT 224 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~---~g~~VAVK~l~~~~~~-----------~~~~f~~Ei~iL~~L~HpNIV~llg 224 (873)
.++|.+.+.||+|+||.||+|.+.. ++..||||++...... ....+.+|+.+++.++|+||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3578999999999999999999976 7789999998744321 1234667888889999999999999
Q ss_pred eeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 002857 225 ACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPS 304 (873)
Q Consensus 225 ~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKps 304 (873)
++... +......++||||+ +++|.+++.. ...+++.+++.|+.||+.||+||| +.+|+||||||+
T Consensus 116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~ 180 (345)
T 2v62_A 116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQ----------NGTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAA 180 (345)
T ss_dssp EEEEE-SSSCEEEEEEEECE-EEEHHHHCBG----------GGBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGG
T ss_pred ccccc-cCCCcEEEEEEecc-CCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHH
Confidence 97542 23467899999999 9999999953 237899999999999999999999 889999999999
Q ss_pred CeeeCCCC--CeEEecccccccccccccc-----ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCC
Q 002857 305 NILLNDEM--TACVADFGIARFLEATNEQ-----TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPS 377 (873)
Q Consensus 305 NILLd~~~--~vKLsDFGla~~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf 377 (873)
|||++.++ .+||+|||+++.+...... .......||..|+|||++.+..++.++||||||+++|||+||+.||
T Consensus 181 NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf 260 (345)
T 2v62_A 181 NLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPW 260 (345)
T ss_dssp GEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred HEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999877 9999999999876443211 1113446999999999999999999999999999999999999999
Q ss_pred CcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCC
Q 002857 378 DDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMK 457 (873)
Q Consensus 378 ~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPT 457 (873)
................ ....+.... ... .+. ..+...+.+++..||+.||++|||
T Consensus 261 ~~~~~~~~~~~~~~~~---------~~~~~~~~~------~~~--~~~--------~~~~~~l~~li~~~l~~dp~~Rps 315 (345)
T 2v62_A 261 EQNLKDPVAVQTAKTN---------LLDELPQSV------LKW--APS--------GSSCCEIAQFLVCAHSLAYDEKPN 315 (345)
T ss_dssp GGGTTCHHHHHHHHHH---------HHHTTTHHH------HHH--SCT--------TSCCHHHHHHHHHHHTCCTTCCCC
T ss_pred cccccccHHHHHHHHh---------hcccccHHH------Hhh--ccc--------cccHHHHHHHHHHHhhcCcccCCC
Confidence 6532222111111000 000000000 000 000 011335889999999999999999
Q ss_pred HHHHHHHHHHH
Q 002857 458 INDVELGLRLI 468 (873)
Q Consensus 458 m~EVl~~Le~i 468 (873)
+.+|++.|+.+
T Consensus 316 ~~~l~~~L~~~ 326 (345)
T 2v62_A 316 YQALKKILNPH 326 (345)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHHhcc
Confidence 99999999864
No 88
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.2e-39 Score=345.88 Aligned_cols=260 Identities=23% Similarity=0.357 Sum_probs=195.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCC---CcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEG---APAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~---g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|++.+.||+|+||.||+|.+..+ +..||||+++.... ...+.+.+|+.++++++||||+++++++. .
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------E 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------S
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------c
Confidence 46789999999999999999998643 45799999875332 23467899999999999999999999852 3
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..++||||+++|+|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 155 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQV---------RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCV 155 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHH---------TTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEE
T ss_pred CccEEEEecCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCE
Confidence 457899999999999999953 2346899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++....... .......+|..|+|||++.+..++.++||||||+++|||++ |..||....... ...
T Consensus 156 kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~---- 228 (281)
T 1mp8_A 156 KLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIG---- 228 (281)
T ss_dssp EECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHH----
T ss_pred EECccccccccCcccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHH----
Confidence 9999999987644321 11223346789999999988899999999999999999997 999997632211 111
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
.+..... .+... .+...+.+++.+||+.||++|||+.||++.|+.+.+..
T Consensus 229 -------~i~~~~~---------------~~~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 229 -------RIENGER---------------LPMPP-------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp -------HHHTTCC---------------CCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------HHHcCCC---------------CCCCC-------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1100000 00000 11235788999999999999999999999999987654
No 89
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.2e-39 Score=354.30 Aligned_cols=275 Identities=22% Similarity=0.328 Sum_probs=208.5
Q ss_pred CCcceeecccCceEEEEEEEc----CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 162 FSSENLIGAGNFASVYKGILF----EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~----~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
|++.+.||+|+||.||++.+. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.. .....
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED---AGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---TTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEec---CCCce
Confidence 488999999999999888653 4678999999975432 334678999999999999999999999753 23567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ..+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 110 ~~lv~e~~~~~~L~~~l~~-----------~~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl 175 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPR-----------HSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKI 175 (318)
T ss_dssp EEEEECCCTTCBHHHHGGG-----------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecccCCcHHHHHhh-----------CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEE
Confidence 8999999999999999942 23899999999999999999999 889999999999999999999999
Q ss_pred ecccccccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+++........ .......+|..|+|||++.+..++.++||||||+++|||+||+.||............+.....
T Consensus 176 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~ 255 (318)
T 3lxp_A 176 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 255 (318)
T ss_dssp CCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHH
T ss_pred CCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccch
Confidence 999999876543321 1222345788899999999889999999999999999999999998653221111111000000
Q ss_pred ch-hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhhc
Q 002857 396 PE-RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLLE 474 (873)
Q Consensus 396 ~~-~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~~ 474 (873)
.. .+.+.+... ...+... .+...+.+|+.+||+.||++|||+.||++.|+.+.+.+..
T Consensus 256 ~~~~~~~~~~~~--------------~~~~~~~-------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 256 TVLRLTELLERG--------------ERLPRPD-------KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHHHHHHHHHTT--------------CCCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHhcc--------------cCCCCCc-------cccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 00 111111110 0001110 1233588999999999999999999999999999888764
No 90
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.9e-39 Score=344.95 Aligned_cols=263 Identities=23% Similarity=0.403 Sum_probs=201.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCC---cEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGA---PAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g---~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.+|++.++||+|+||.||+|++..++ ..||+|.++.... ...+.+.+|+.++++++||||++++++|. ..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~ 100 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEG 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----CSSS
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE----cCCC
Confidence 45788899999999999999875433 3589999874332 33467899999999999999999999863 3456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~k 168 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVK 168 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHC---------TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEE
T ss_pred ceEEEEeCCCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEE
Confidence 78999999999999999952 3456889999999999999999999 89999999999999999999999
Q ss_pred Eeccccccccccccc--cccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 316 VADFGIARFLEATNE--QTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 316 LsDFGla~~~~~~~~--~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
|+|||+++....... ........+|..|+|||.+.+..++.++||||||+++|||++ |..||....... ....
T Consensus 169 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~~~~-- 244 (298)
T 3f66_A 169 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVY-- 244 (298)
T ss_dssp ECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--HHHH--
T ss_pred ECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--HHHH--
Confidence 999999986643321 122233457889999999998899999999999999999999 555554422111 1110
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
+....... .+. .+...+.+++.+||+.+|++|||+.||++.|+.+...+
T Consensus 245 ---------~~~~~~~~-------------~~~---------~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 245 ---------LLQGRRLL-------------QPE---------YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp ---------HHTTCCCC-------------CCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred ---------HhcCCCCC-------------CCc---------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 00000000 000 01234788999999999999999999999999987755
Q ss_pred h
Q 002857 473 L 473 (873)
Q Consensus 473 ~ 473 (873)
.
T Consensus 294 ~ 294 (298)
T 3f66_A 294 I 294 (298)
T ss_dssp C
T ss_pred c
Confidence 3
No 91
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=9.3e-39 Score=359.01 Aligned_cols=206 Identities=20% Similarity=0.232 Sum_probs=176.4
Q ss_pred hcCCCcceeeccc--CceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAG--NFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G--~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|++.++||+| +||.||+|++..+++.||||+++.... ...+.+.+|+.++++++|||||++++++ ...
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~ 98 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF-----IAD 98 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EET
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEE-----EEC
Confidence 4679999999999 999999999998999999999975432 2346788899999999999999999996 446
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..++||||+++|+|.+++.. .....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~ 167 (389)
T 3gni_B 99 NELWVVTSFMAYGSAKDLICT--------HFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKV 167 (389)
T ss_dssp TEEEEEEECCTTCBHHHHHHH--------TCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCE
T ss_pred CEEEEEEEccCCCCHHHHHhh--------hcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCE
Confidence 679999999999999999953 23456899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccc-----cccccccccccccCCCcccCC--CCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 315 CVADFGIARFLEATNE-----QTSSIGVKGTTGYIAPEYGMG--HETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 315 KLsDFGla~~~~~~~~-----~~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
||+|||.+........ ........||..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 168 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 168 YLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp EECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred EEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 9999999875433211 111222468999999999987 57999999999999999999999999764
No 92
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.8e-38 Score=347.25 Aligned_cols=207 Identities=26% Similarity=0.371 Sum_probs=161.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|++.+.||+|+||.||+|.+..+++.||||+++.... ...+.+.+|++++++++||||+++++++ ..++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI-----HTENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEE-----CCTTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEE-----EECCeE
Confidence 4689999999999999999999988999999999975432 3346789999999999999999999995 456789
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||++ |+|.+++... ........+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~----~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~ 150 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSR----TVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLG 150 (317)
T ss_dssp EEEEECCC-CBHHHHHHHH----HSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEEecC-CCHHHHHHhc----cccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEEC
Confidence 99999998 5999998531 11123456899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|||+++....... ......||..|+|||++.+. .++.++|||||||++|||+||+.||...
T Consensus 151 Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 151 DFGLARAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp CCSSCEETTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCccceecCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999986543221 12234689999999998764 6899999999999999999999999763
No 93
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.9e-39 Score=351.73 Aligned_cols=269 Identities=21% Similarity=0.253 Sum_probs=201.9
Q ss_pred HHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc-----CCcchhHHHHHHHHHHhhhhccceeeeeeeecc
Q 002857 155 LYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL-----HHDASKSFTVECEVMRNIIHRKIIKVVTACSRV 229 (873)
Q Consensus 155 l~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~-----~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~ 229 (873)
+....++|.+.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|++++++++||||+++++++
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~--- 97 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY--- 97 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh---
Confidence 455677899999999999999999999999999999998643 334557899999999999999999999996
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccc------------------------------cccCCCCCCchhhhHHHHH
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEED------------------------------KRHKAPGNLNSLERLNIAI 279 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~------------------------------~~~~~~~~Ls~~~~l~Ia~ 279 (873)
...+..++||||+++|+|.+++....... ........+++..++.|+.
T Consensus 98 --~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 98 --EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp --ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred --ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 45678999999999999999995311100 0001122356778889999
Q ss_pred HHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC--CeEEecccccccccccccc--ccccccccccccCCCcccCC--CC
Q 002857 280 DVASALEYLHLGCKPPIAHCDIKPSNILLNDEM--TACVADFGIARFLEATNEQ--TSSIGVKGTTGYIAPEYGMG--HE 353 (873)
Q Consensus 280 qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~--~vKLsDFGla~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~--~~ 353 (873)
||+.||+||| +.+|+||||||+|||++.++ .+||+|||+++.+...... .......||+.|+|||++.+ ..
T Consensus 176 qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 252 (345)
T 3hko_A 176 QIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252 (345)
T ss_dssp HHHHHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSC
T ss_pred HHHHHHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCC
Confidence 9999999999 88999999999999998766 8999999999866432221 12234569999999999875 67
Q ss_pred CCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHH
Q 002857 354 TSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSII 433 (873)
Q Consensus 354 ~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~ 433 (873)
++.++||||||+++|||++|+.||....... ....+......... ...
T Consensus 253 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------------~~~~~~~~~~~~~~---------------~~~---- 300 (345)
T 3hko_A 253 YGPKCDAWSAGVLLHLLLMGAVPFPGVNDAD-------------TISQVLNKKLCFEN---------------PNY---- 300 (345)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------------HHHHHHHCCCCTTS---------------GGG----
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCCCCCChHH-------------HHHHHHhcccccCC---------------ccc----
Confidence 8999999999999999999999997532211 01111111110000 000
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 434 LECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 434 ~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
......+.+++.+||+.||++|||+.|+++
T Consensus 301 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 301 NVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp GGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 001234778999999999999999999876
No 94
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.5e-39 Score=346.90 Aligned_cols=253 Identities=21% Similarity=0.324 Sum_probs=199.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCC-------cEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGA-------PAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g-------~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
.++|.+.+.||+|+||.||+|++..++ ..||+|++........+.+.+|++++++++||||+++++++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----- 81 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVC----- 81 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEE-----
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----
Confidence 357899999999999999999987666 47999999766666668899999999999999999999996
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
...+..++||||+++|+|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.+
T Consensus 82 ~~~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 82 VCGDENILVQEFVKFGSLDTYLKK---------NKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIRE 149 (289)
T ss_dssp CCTTCCEEEEECCTTCBHHHHHHH---------TGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEEC
T ss_pred EeCCCCEEEEECCCCCCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecC
Confidence 345667999999999999999953 2334889999999999999999999 8999999999999999988
Q ss_pred CC--------eEEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccc
Q 002857 312 MT--------ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFK 382 (873)
Q Consensus 312 ~~--------vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~ 382 (873)
+. +||+|||++...... ....+|..|+|||++.+ ..++.++||||||+++|||++|..|+.....
T Consensus 150 ~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~ 223 (289)
T 4fvq_A 150 EDRKTGNPPFIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223 (289)
T ss_dssp CBGGGTBCCEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CcccccccceeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc
Confidence 87 999999999754221 22457899999999987 6789999999999999999996555432111
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
... . ....... ...+... ...+.+++.+||+.||++|||+.||+
T Consensus 224 ~~~-~------------~~~~~~~--------------~~~~~~~---------~~~l~~li~~~l~~dp~~Rps~~~ll 267 (289)
T 4fvq_A 224 SQR-K------------LQFYEDR--------------HQLPAPK---------AAELANLINNCMDYEPDHRPSFRAII 267 (289)
T ss_dssp HHH-H------------HHHHHTT--------------CCCCCCS---------SCTTHHHHHHHSCSSGGGSCCHHHHH
T ss_pred hHH-H------------HHHhhcc--------------CCCCCCC---------CHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 110 0 0000000 0000000 11367899999999999999999999
Q ss_pred HHHHHHHH
Q 002857 463 LGLRLIKK 470 (873)
Q Consensus 463 ~~Le~i~~ 470 (873)
+.|+.+..
T Consensus 268 ~~l~~l~~ 275 (289)
T 4fvq_A 268 RDLNSLFT 275 (289)
T ss_dssp HHHHTCC-
T ss_pred HHHHHhcC
Confidence 99997643
No 95
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.4e-39 Score=342.58 Aligned_cols=256 Identities=21% Similarity=0.343 Sum_probs=204.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccc-------
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY------- 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~------- 231 (873)
.++|++.+.||+|+||.||+|.+..+++.||||+++... +.+.+|++++++++||||+++++++....+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 357899999999999999999998889999999987432 467899999999999999999998743221
Q ss_pred ----cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCee
Q 002857 232 ----QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNIL 307 (873)
Q Consensus 232 ----~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNIL 307 (873)
......++||||+++|+|.+++.. .....+++..++.|+.||+.||.||| +.+|+||||||+|||
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil 154 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEK--------RRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIF 154 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHH--------GGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhh--------ccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEE
Confidence 124457999999999999999953 12356889999999999999999999 889999999999999
Q ss_pred eCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhh
Q 002857 308 LNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 387 (873)
Q Consensus 308 Ld~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l 387 (873)
++.++.+||+|||+++....... .....||..|+|||++.+..++.++||||||+++|||++|..|+....
T Consensus 155 ~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 225 (284)
T 2a19_B 155 LVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS------ 225 (284)
T ss_dssp EEETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH------
T ss_pred EcCCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH------
Confidence 99999999999999987644322 223458999999999999999999999999999999999998863210
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRL 467 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~ 467 (873)
. ....+.+..+... ....+.+++.+||+.||++|||+.||++.|+.
T Consensus 226 -~--------~~~~~~~~~~~~~-------------------------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~ 271 (284)
T 2a19_B 226 -K--------FFTDLRDGIISDI-------------------------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTV 271 (284)
T ss_dssp -H--------HHHHHHTTCCCTT-------------------------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -H--------HHHHhhccccccc-------------------------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 0 0011111111000 01236789999999999999999999999998
Q ss_pred HHHhh
Q 002857 468 IKKKL 472 (873)
Q Consensus 468 i~~~l 472 (873)
++...
T Consensus 272 ~~~~~ 276 (284)
T 2a19_B 272 WKKSP 276 (284)
T ss_dssp HTC--
T ss_pred HhhCC
Confidence 75433
No 96
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.7e-39 Score=372.08 Aligned_cols=260 Identities=24% Similarity=0.386 Sum_probs=205.8
Q ss_pred HHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 155 LYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 155 l~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.....++|.+.+.||+|+||.||+|.+. ++..||||+++... ...+.|.+|+.+|++++||||+++++++. .
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~ 254 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT------K 254 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------S
T ss_pred eeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------C
Confidence 3445678899999999999999999884 56789999997543 34578999999999999999999999863 3
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..+|||||+++|+|.++|+. .....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 255 ~~~~lv~e~~~~g~L~~~l~~--------~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~ 323 (454)
T 1qcf_A 255 EPIYIITEFMAKGSLLDFLKS--------DEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVC 323 (454)
T ss_dssp SSCEEEECCCTTCBHHHHHHS--------HHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCE
T ss_pred CccEEEEeecCCCcHHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcE
Confidence 457999999999999999953 11235788899999999999999999 8899999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++...... ........++..|+|||++....++.++||||||+++|||+| |+.||....... .
T Consensus 324 kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~------ 394 (454)
T 1qcf_A 324 KIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--V------ 394 (454)
T ss_dssp EECSTTGGGGBCCHH-HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--H------
T ss_pred EEeeCCCceEcCCCc-eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--H------
Confidence 999999998764321 111223346788999999998899999999999999999999 999997532111 0
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
...+.... ..+.. ..+...+.+|+.+||+.||++||||.+|++.|+.+.
T Consensus 395 ------~~~i~~~~--------------~~~~~-------~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 395 ------IRALERGY--------------RMPRP-------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp ------HHHHHHTC--------------CCCCC-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ------HHHHHcCC--------------CCCCC-------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 00000000 00000 012345889999999999999999999999998753
No 97
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.1e-39 Score=353.01 Aligned_cols=264 Identities=22% Similarity=0.313 Sum_probs=195.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc---chhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD---ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~---~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|++.+.||+|+||.||+|++..+++.||||+++..... ....+.+|++++++++||||+++++++.... ....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence 46899999999999999999999999999999999754322 2356889999999999999999999875422 2223
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.++++. ...+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~k 156 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHT----------EGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVK 156 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEE
T ss_pred ccEEEEecCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEE
Confidence 46999999999999999953 346899999999999999999999 88999999999999999999999
Q ss_pred Eecccccccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++.+...... .......||..|+|||++.+..++.++||||||+++|||+||+.||..........
T Consensus 157 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~------- 229 (311)
T 3ork_A 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY------- 229 (311)
T ss_dssp ECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-------
T ss_pred EeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-------
Confidence 9999999866443221 22233568999999999999999999999999999999999999997632211100
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH-HHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE-LGLRLI 468 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl-~~Le~i 468 (873)
..+...... . ..........+.+++.+||+.||++||++.+++ ..|..+
T Consensus 230 ------~~~~~~~~~-----------------~--~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 230 ------QHVREDPIP-----------------P--SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ------HHHHCCCCC-----------------H--HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ------HHhcCCCCC-----------------c--ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 000000000 0 000001123578899999999999999666544 455443
No 98
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=352.64 Aligned_cols=260 Identities=17% Similarity=0.150 Sum_probs=205.1
Q ss_pred HhhcCCCcceeecccCceEEEEEE-----EcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh---hccceeeeeeeec
Q 002857 157 SATKGFSSENLIGAGNFASVYKGI-----LFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII---HRKIIKVVTACSR 228 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~-----~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~---HpNIV~llg~c~~ 228 (873)
...++|.+.++||+|+||.||+|. ...+++.||||+++.. ...++..|++++.+++ |+||+++++++
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~-- 136 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAH-- 136 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE--
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheee--
Confidence 345789999999999999999994 5567889999998643 3467888888888886 99999999996
Q ss_pred ccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 229 VDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 229 ~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
...+..+|||||+++|+|.+++... .......+++..++.|+.||+.||+||| +.+|+||||||+|||+
T Consensus 137 ---~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll 205 (365)
T 3e7e_A 137 ---LFQNGSVLVGELYSYGTLLNAINLY-----KNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFIL 205 (365)
T ss_dssp ---ECSSCEEEEECCCCSCBHHHHHHHH-----HTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEE
T ss_pred ---ecCCCcEEEEeccCCCcHHHHHHHh-----hcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEe
Confidence 4456789999999999999999531 1123567999999999999999999999 8999999999999999
Q ss_pred CC-----------CCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCC
Q 002857 309 ND-----------EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPS 377 (873)
Q Consensus 309 d~-----------~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf 377 (873)
+. ++.+||+|||+++.+.............||..|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 206 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf 285 (365)
T 3e7e_A 206 GNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMK 285 (365)
T ss_dssp CGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCC
T ss_pred cccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcc
Confidence 98 8999999999998654333333444567999999999999999999999999999999999999998
Q ss_pred CcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCC-C
Q 002857 378 DDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGER-M 456 (873)
Q Consensus 378 ~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eR-P 456 (873)
.......... ...+... +. .+.+.+++..|++.+|.+| |
T Consensus 286 ~~~~~~~~~~----------------~~~~~~~--------------~~----------~~~~~~~~~~~l~~~p~~r~~ 325 (365)
T 3e7e_A 286 VKNEGGECKP----------------EGLFRRL--------------PH----------LDMWNEFFHVMLNIPDCHHLP 325 (365)
T ss_dssp EEEETTEEEE----------------CSCCTTC--------------SS----------HHHHHHHHHHHHCCCCTTCCC
T ss_pred ccCCCCceee----------------chhcccc--------------Cc----------HHHHHHHHHHHcCCCCCCcch
Confidence 6532211000 0000000 00 1235678899999999998 6
Q ss_pred CHHHHHHHHHHHHHhh
Q 002857 457 KINDVELGLRLIKKKL 472 (873)
Q Consensus 457 Tm~EVl~~Le~i~~~l 472 (873)
++.++.+.|+.+....
T Consensus 326 ~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 326 SLDLLRQKLKKVFQQH 341 (365)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8899999998876654
No 99
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.8e-38 Score=346.58 Aligned_cols=276 Identities=21% Similarity=0.271 Sum_probs=198.6
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
..++|++.+.||+|+||.||+|++. +++.||||+++.... .....+.+|++++++++||||+++++++ ....
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~ 92 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI-----HSER 92 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCSS
T ss_pred hHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEE-----ccCC
Confidence 4578999999999999999999984 588999999874322 2346789999999999999999999995 4566
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++ +|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 93 ~~~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~k 159 (311)
T 3niz_A 93 CLTLVFEFMEK-DLKKVLDE---------NKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALK 159 (311)
T ss_dssp CEEEEEECCSE-EHHHHHHT---------CTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEE
T ss_pred EEEEEEcCCCC-CHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEE
Confidence 78999999975 88888742 3456899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh--
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ-- 392 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~-- 392 (873)
|+|||+++...... .......+|..|+|||++.+ ..++.++||||||+++|||++|+.||........ +.....
T Consensus 160 l~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~ 236 (311)
T 3niz_A 160 LADFGLARAFGIPV--RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSIL 236 (311)
T ss_dssp ECCCTTCEETTSCC--C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHHH
T ss_pred EccCcCceecCCCc--ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHH
Confidence 99999998654322 12223468999999999876 5689999999999999999999999976433221 111111
Q ss_pred -hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 393 -SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 393 -~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...+..+....+..... .....................++.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 237 GTPNPREWPQVQELPLWK--------QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCTTTSGGGTTSHHHH--------SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCCChHHhhhhhccchhh--------hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000000000000 0000000000001111112235789999999999999999999864
No 100
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7e-39 Score=349.47 Aligned_cols=245 Identities=20% Similarity=0.219 Sum_probs=190.8
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhh-hhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.++||+|+||+||+|++..+++.||||++...... ....+..|+..+.++ +|+||++++++| ..++.
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~-----~~~~~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW-----EEGGI 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEE-----EeCCE
Confidence 5799999999999999999999989999999998643322 233556666666666 899999999996 44677
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+ +++|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~---------~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl 198 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEA---------WGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKL 198 (311)
T ss_dssp EEEEEECC-CCBHHHHHHH---------HCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEE
T ss_pred EEEEEecc-CCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEE
Confidence 99999999 7799998853 2346999999999999999999999 789999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||+++...... ......||..|+|||++.+ .++.++||||||+++|||++|..|+.... ..
T Consensus 199 ~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~~--------- 261 (311)
T 3p1a_A 199 GDFGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GW--------- 261 (311)
T ss_dssp CCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HH---------
T ss_pred ccceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----HH---------
Confidence 9999998654322 2223458999999999876 78999999999999999999977764311 01
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+....+... ........+.+++.+||+.||++|||+.||++
T Consensus 262 ---~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 262 ---QQLRQGYLPPE---------------------FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHHTTTCCCHH---------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHhccCCCcc---------------------cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11111111000 00011235788999999999999999999875
No 101
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.6e-38 Score=344.84 Aligned_cols=270 Identities=21% Similarity=0.294 Sum_probs=199.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|.+.+.||+|+||.||+|.+..+++.||||+++... ......+.+|+.++++++|+||+++++++. ..+
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~ 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDN 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETT
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----cCC
Confidence 357899999999999999999998899999999987432 223467899999999999999999999963 456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++... ......+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+|
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~k 176 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHF------KKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVK 176 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEE
T ss_pred cEEEEEecCCCCCHHHHHHHh------cccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEE
Confidence 789999999999999998531 123456899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||+++....... ......|+..|+|||++.+..++.++||||||+++|||++|+.||.........+...+
T Consensus 177 l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---- 250 (310)
T 2wqm_A 177 LGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI---- 250 (310)
T ss_dssp ECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH----
T ss_pred EEeccceeeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh----
Confidence 999999986543221 12234689999999999999999999999999999999999999865321111111100
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhhcC
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLLET 475 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~~~ 475 (873)
....+ .+... ......+.+++.+||+.||++|||+.+|++.|+.++......
T Consensus 251 -------~~~~~---------------~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 251 -------EQCDY---------------PPLPS------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp -------HTTCS---------------CCCCT------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred -------hcccC---------------CCCcc------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 00000 00000 001234788999999999999999999999999998877544
Q ss_pred C
Q 002857 476 P 476 (873)
Q Consensus 476 ~ 476 (873)
+
T Consensus 303 ~ 303 (310)
T 2wqm_A 303 L 303 (310)
T ss_dssp -
T ss_pred h
Confidence 3
No 102
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=346.16 Aligned_cols=266 Identities=23% Similarity=0.280 Sum_probs=193.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-hccceeeeeeeeccc---ccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-HRKIIKVVTACSRVD---YQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~---~~~~ 234 (873)
..+|++.++||+|+||.||+|++..+++.||||++........+.+.+|+.++.++. ||||+++++++.... ....
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 457899999999999999999998899999999987665555678999999999996 999999999874221 1345
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC--eeeccCCCCCeeeCCCC
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP--IAHCDIKPSNILLNDEM 312 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g--IvHrDLKpsNILLd~~~ 312 (873)
...++||||+. |+|.+++... .....+++.+++.|+.||+.||+||| +.+ |+||||||+|||++.++
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~ 175 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKM-------ESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQG 175 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHH-------HTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTS
T ss_pred ceEEEEEEecC-CCHHHHHHHh-------hccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCC
Confidence 56899999995 7999988531 23456999999999999999999999 778 99999999999999999
Q ss_pred CeEEeccccccccccccccc----------cccccccccccCCCccc---CCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 313 TACVADFGIARFLEATNEQT----------SSIGVKGTTGYIAPEYG---MGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~----------~~~~~~Gt~~Y~APE~l---~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
.+||+|||+++......... ......||..|+|||++ .+..++.++||||||+++|||+||+.||..
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 99999999998764432211 11134589999999998 566789999999999999999999999965
Q ss_pred ccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHH
Q 002857 380 MFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIN 459 (873)
Q Consensus 380 ~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~ 459 (873)
.... .++...... +.... ....+.+|+.+||+.||++|||+.
T Consensus 256 ~~~~-----------------~~~~~~~~~--------------~~~~~-------~~~~~~~li~~~l~~~p~~Rps~~ 297 (337)
T 3ll6_A 256 GAKL-----------------RIVNGKYSI--------------PPHDT-------QYTVFHSLIRAMLQVNPEERLSIA 297 (337)
T ss_dssp ---------------------------CCC--------------CTTCC-------SSGGGHHHHHHHSCSSGGGSCCHH
T ss_pred hhHH-----------------HhhcCcccC--------------Ccccc-------cchHHHHHHHHHccCChhhCcCHH
Confidence 2111 001000000 00000 011266899999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 002857 460 DVELGLRLIKKKLL 473 (873)
Q Consensus 460 EVl~~Le~i~~~l~ 473 (873)
||++.|+.+.....
T Consensus 298 e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 298 EVVHQLQEIAAARN 311 (337)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccC
Confidence 99999999876543
No 103
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=352.93 Aligned_cols=260 Identities=23% Similarity=0.402 Sum_probs=199.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcE----EEEEEeecc-CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPA----VAIKVFNFL-HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~----VAVK~l~~~-~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
.++|++.++||+|+||.||+|.+..+++. ||+|.+... .....+.+.+|+.++++++||||+++++++..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 88 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----
Confidence 36799999999999999999998877765 467766533 33455789999999999999999999999742
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
...++|+||+.+|+|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 89 -~~~~~v~~~~~~g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~ 155 (327)
T 3lzb_A 89 -STVQLITQLMPFGCLLDYVRE---------HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp -SSEEEEECCCSSCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTE
T ss_pred -CCceEEEEecCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCC
Confidence 237899999999999999853 3456899999999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 156 ~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-------- 227 (327)
T 3lzb_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------- 227 (327)
T ss_dssp EEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------
T ss_pred EEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--------
Confidence 99999999987654433333334457889999999999999999999999999999999 999997632221
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHh
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKK 471 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~ 471 (873)
+...+.... ..+.... +...+.+++.+||+.||++|||+.||++.|+.+...
T Consensus 228 ------~~~~~~~~~--------------~~~~~~~-------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 228 ------ISSILEKGE--------------RLPQPPI-------CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ------HHHHHHTTC--------------CCCCCTT-------BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ------HHHHHHcCC--------------CCCCCcc-------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 111111100 0000000 122477899999999999999999999999998653
No 104
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=354.45 Aligned_cols=252 Identities=24% Similarity=0.313 Sum_probs=187.0
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
..++|.+.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|++++++++||||+++++++ ......
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 123 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIF-----ETPTEI 123 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeE-----ecCCeE
Confidence 4578999999999999999999998889999999997443 346788999999999999999999996 446679
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC---CCCe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND---EMTA 314 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~---~~~v 314 (873)
++||||+++|+|.+++. ....+++.+++.++.||+.||.||| +.+|+||||||+|||++. ++.+
T Consensus 124 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~ 190 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIV----------EKGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPL 190 (349)
T ss_dssp EEEECCCCSCBHHHHHT----------TCSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCE
Confidence 99999999999999984 2456899999999999999999999 889999999999999975 8899
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
||+|||+++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||.........+
T Consensus 191 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------- 260 (349)
T 2w4o_A 191 KIADFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF------- 260 (349)
T ss_dssp EECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHH-------
T ss_pred EEccCccccccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHH-------
Confidence 999999998654321 1223568999999999999999999999999999999999999996532221111
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+....... ..++.. +....+.+++.+||+.||++|||+.|+++
T Consensus 261 -----~~i~~~~~~~------------~~~~~~-------~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 261 -----RRILNCEYYF------------ISPWWD-------EVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -----HHHHTTCCCC------------CTTTTT-------TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -----HHHHhCCCcc------------CCchhh-------hCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111110000 000000 11234778999999999999999998864
No 105
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=355.74 Aligned_cols=268 Identities=15% Similarity=0.169 Sum_probs=204.0
Q ss_pred cCCCcceeecccCceEEEEEEEcC--------CCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcccee----------
Q 002857 160 KGFSSENLIGAGNFASVYKGILFE--------GAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIK---------- 221 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~--------~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~---------- 221 (873)
++|.+.+.||+|+||.||+|++.. .++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 579999999999999999999876 4789999998733 57899999999999999998
Q ss_pred -----eeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCe
Q 002857 222 -----VVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPI 296 (873)
Q Consensus 222 -----llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gI 296 (873)
+++++. ..+...++||||+ +++|.+++.. .....+++.+++.|+.||+.||+||| +.+|
T Consensus 117 ~~i~~~~~~~~----~~~~~~~lv~e~~-~~~L~~~l~~--------~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~i 180 (352)
T 2jii_A 117 LAIPTCMGFGV----HQDKYRFLVLPSL-GRSLQSALDV--------SPKHVLSERSVLQVACRLLDALEFLH---ENEY 180 (352)
T ss_dssp CSCCCCCEEEE----ETTTEEEEEEECC-CEEHHHHHHH--------SGGGCCCHHHHHHHHHHHHHHHHHHH---HTTC
T ss_pred cCccchhhccc----cCCcEEEEEecCC-CcCHHHHHHh--------CCcCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 444432 2357789999999 9999999953 12356899999999999999999999 8899
Q ss_pred eeccCCCCCeeeCCCC--CeEEeccccccccccccccc-----cccccccccccCCCcccCCCCCCcchhhHhHHHHHHH
Q 002857 297 AHCDIKPSNILLNDEM--TACVADFGIARFLEATNEQT-----SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLE 369 (873)
Q Consensus 297 vHrDLKpsNILLd~~~--~vKLsDFGla~~~~~~~~~~-----~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~E 369 (873)
+||||||+|||++.++ .+||+|||+++.+....... ......||..|+|||++.+..++.++||||||+++||
T Consensus 181 vH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e 260 (352)
T 2jii_A 181 VHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLK 260 (352)
T ss_dssp BCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence 9999999999999998 99999999998765432211 1123469999999999999999999999999999999
Q ss_pred HHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 002857 370 MFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSA 449 (873)
Q Consensus 370 LlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~ 449 (873)
|++|+.||.........+..... .+... ... +....... ......+.+++.+||+
T Consensus 261 l~~g~~pf~~~~~~~~~~~~~~~--------~~~~~-~~~----------~~~~~~~~------~~~~~~l~~li~~~l~ 315 (352)
T 2jii_A 261 WLYGFLPWTNCLPNTEDIMKQKQ--------KFVDK-PGP----------FVGPCGHW------IRPSETLQKYLKVVMA 315 (352)
T ss_dssp HHHSCCTTGGGTTCHHHHHHHHH--------HHHHS-CCC----------EECTTSCE------ECCCHHHHHHHHHHHT
T ss_pred HHhCCCCcccCCcCHHHHHHHHH--------hccCC-hhh----------hhhhcccc------CCCcHHHHHHHHHHHh
Confidence 99999999764322111111100 00000 000 00000000 0012347889999999
Q ss_pred cCcCCCCCHHHHHHHHHHHHHhhh
Q 002857 450 ELPGERMKINDVELGLRLIKKKLL 473 (873)
Q Consensus 450 ~dP~eRPTm~EVl~~Le~i~~~l~ 473 (873)
.||++|||+.+|++.|+.+.....
T Consensus 316 ~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 316 LTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CChhhCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999877664
No 106
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-38 Score=337.38 Aligned_cols=257 Identities=28% Similarity=0.410 Sum_probs=205.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|++++++++||||+++++++ ...+..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCeE
Confidence 357889999999999999999885 667899999975443 346899999999999999999999996 3456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++++|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 80 lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~d 147 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRT---------QRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSD 147 (267)
T ss_dssp EEECCCTTCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECC
T ss_pred EEEeCCCCCcHHHHHhh---------CcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcc
Confidence 99999999999999953 2356889999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||+++...... ........++..|+|||++.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 148 fg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~--------- 215 (267)
T 3t9t_A 148 FGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VV--------- 215 (267)
T ss_dssp TTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HH---------
T ss_pred ccccccccccc-ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--HH---------
Confidence 99998654321 111223457788999999988889999999999999999999 899987532111 00
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
..+... ... ..+. .....+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 216 --~~i~~~-~~~------------~~~~---------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 216 --EDISTG-FRL------------YKPR---------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp --HHHHTT-CCC------------CCCT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHhcC-CcC------------CCCc---------cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011000 000 0000 012247789999999999999999999999999865
No 107
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.9e-38 Score=354.77 Aligned_cols=253 Identities=21% Similarity=0.306 Sum_probs=201.4
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++++++||||+++++++ ...+.
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~ 102 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESF 102 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCE
Confidence 4679999999999999999999998999999999975432 2346788999999999999999999995 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC---CC
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE---MT 313 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~---~~ 313 (873)
.++||||+++|+|.+++. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.+ +.
T Consensus 103 ~~lv~e~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~ 169 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAA 169 (362)
T ss_dssp EEEEECCCCSCBHHHHHT----------TCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCC
Confidence 899999999999999984 2456899999999999999999999 8899999999999999865 45
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+..
T Consensus 170 ~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~---- 240 (362)
T 2bdw_A 170 VKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYA---- 240 (362)
T ss_dssp EEECCCTTCBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH----
T ss_pred EEEeecCcceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHH----
Confidence 9999999998664322 223356999999999999999999999999999999999999999653211 0110
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
.+....+. .+.. .. ......+.+++.+||+.||++|||+.|+++.
T Consensus 241 -------~i~~~~~~--------------~~~~-~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 241 -------QIKAGAYD--------------YPSP-EW----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -------HHHHTCCC--------------CCTT-GG----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -------HHHhCCCC--------------CCcc-cc----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11100000 0000 00 0112347789999999999999999998753
No 108
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.7e-38 Score=337.18 Aligned_cols=252 Identities=22% Similarity=0.260 Sum_probs=202.9
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
..++|.+.+.||+|+||.||+|.+..++..||+|++........+.+.+|++++++++||||+++++++ ......
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 81 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF-----EDNTDI 81 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCeE
Confidence 346799999999999999999999989999999999876666678899999999999999999999996 456778
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee---CCCCCe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL---NDEMTA 314 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL---d~~~~v 314 (873)
++||||+++++|.+++.. ...+++..++.|+.||+.||+||| +.+|+||||||+|||+ +.++.+
T Consensus 82 ~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~ 148 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVH----------KRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPL 148 (277)
T ss_dssp EEEEECCCSCBHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCE
T ss_pred EEEEeccCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcE
Confidence 999999999999998842 345899999999999999999999 8999999999999999 788999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
||+|||++....... ......||..|+|||++.+. ++.++||||||+++|||++|+.||....... ..
T Consensus 149 ~l~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~------ 216 (277)
T 3f3z_A 149 KLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE--VM------ 216 (277)
T ss_dssp EECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH------
T ss_pred EEEecccceeccCcc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH--HH------
Confidence 999999998664332 22234589999999998765 8999999999999999999999997632111 00
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+........ ..........+.+++.+||+.||++|||+.|+++
T Consensus 217 -----~~~~~~~~~~~-------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 217 -----LKIREGTFTFP-------------------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -----HHHHHCCCCCC-------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -----HHHHhCCCCCC-------------------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111000000 0000011235788999999999999999999875
No 109
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.3e-39 Score=350.21 Aligned_cols=278 Identities=23% Similarity=0.378 Sum_probs=210.5
Q ss_pred hcCCCcceeecccCceEEEEEEE----cCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGIL----FEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~----~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++|+||+++++++.. ...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe---cCC
Confidence 35688999999999999999984 45788999999986655566789999999999999999999998642 223
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++++|.+++.. ....+++.+++.++.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~ 184 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQK---------HKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 184 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHH---------STTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEE
T ss_pred CceEEEEECCCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcE
Confidence 467999999999999999953 2346899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccc-cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQT-SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++......... ......++..|+|||++.+..++.++||||||+++|||+||..||...... +......
T Consensus 185 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~ 261 (326)
T 2w1i_A 185 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGN 261 (326)
T ss_dssp EECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCT
T ss_pred EEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhcc
Confidence 999999998765433211 122234778899999998888999999999999999999999987642111 1111100
Q ss_pred cCch-h-HHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHh
Q 002857 394 ALPE-R-VEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKK 471 (873)
Q Consensus 394 ~~~~-~-l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~ 471 (873)
.... . ...+.+ .+.. ....+... .+...+.+++.+||+.||++|||+.||++.|+.+++.
T Consensus 262 ~~~~~~~~~~~~~-~~~~----------~~~~~~~~-------~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 262 DKQGQMIVFHLIE-LLKN----------NGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TCCTHHHHHHHHH-HHHT----------TCCCCCCT-------TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccchhhhHHHHHH-Hhhc----------CCCCCCCC-------cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0000 0 001100 0000 00011110 1234588999999999999999999999999999876
Q ss_pred h
Q 002857 472 L 472 (873)
Q Consensus 472 l 472 (873)
+
T Consensus 324 l 324 (326)
T 2w1i_A 324 M 324 (326)
T ss_dssp H
T ss_pred h
Confidence 5
No 110
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.5e-38 Score=349.84 Aligned_cols=272 Identities=21% Similarity=0.335 Sum_probs=207.5
Q ss_pred hcCCCcceeecccCceEEEEEEEc-------CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhh-hhccceeeeeeeecc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILF-------EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNI-IHRKIIKVVTACSRV 229 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~-------~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~ 229 (873)
.++|.+.+.||+|+||.||+|.+. .++..||||+++.... ...+.+.+|+++++++ +||||+++++++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~--- 110 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 110 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE---
Confidence 468899999999999999999875 3567899999975432 2346789999999999 899999999996
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccc------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEED------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKP 303 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKp 303 (873)
...+..++||||+++|+|.+++....... ........+++..++.++.||+.||+||| +.+|+||||||
T Consensus 111 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp 185 (334)
T 2pvf_A 111 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185 (334)
T ss_dssp --CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred --ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCcc
Confidence 44567899999999999999996411100 00011235899999999999999999999 88999999999
Q ss_pred CCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccc
Q 002857 304 SNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFK 382 (873)
Q Consensus 304 sNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~ 382 (873)
+|||++.++.+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||+| |+.||.....
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 265 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence 999999999999999999987654332223333457889999999988889999999999999999999 9999865321
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
.. +.. .+..... .+... .+...+.+++.+||+.+|++|||+.||+
T Consensus 266 ~~--~~~------------~~~~~~~--------------~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~ell 310 (334)
T 2pvf_A 266 EE--LFK------------LLKEGHR--------------MDKPA-------NCTNELYMMMRDCWHAVPSQRPTFKQLV 310 (334)
T ss_dssp HH--HHH------------HHHHTCC--------------CCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HH--HHH------------HHhcCCC--------------CCCCc-------cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 11 000 0000000 00000 1123478899999999999999999999
Q ss_pred HHHHHHHHhhh
Q 002857 463 LGLRLIKKKLL 473 (873)
Q Consensus 463 ~~Le~i~~~l~ 473 (873)
+.|+.+.....
T Consensus 311 ~~L~~l~~~~~ 321 (334)
T 2pvf_A 311 EDLDRILTLTT 321 (334)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHhccc
Confidence 99999877553
No 111
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.8e-38 Score=346.96 Aligned_cols=280 Identities=23% Similarity=0.349 Sum_probs=207.8
Q ss_pred HHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHh--hhhccceeeeeeeecc
Q 002857 152 YEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRN--IIHRKIIKVVTACSRV 229 (873)
Q Consensus 152 ~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~--L~HpNIV~llg~c~~~ 229 (873)
+..-....++|.+.+.||+|+||.||+|++ +++.||||+++. .....+.+|++++.. ++||||+++++++...
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 333344567899999999999999999987 588999999863 234678889999988 7899999999997432
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC-----CCCeeeccCCCC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC-----KPPIAHCDIKPS 304 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~-----s~gIvHrDLKps 304 (873)
. ......++||||+++|+|.+++.. ..+++.+++.++.||+.||+|||... +.+|+||||||+
T Consensus 109 ~-~~~~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~ 176 (342)
T 1b6c_B 109 N-GTWTQLWLVSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 176 (342)
T ss_dssp C-SSCCCEEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGG
T ss_pred C-CccceeEEEEeecCCCcHHHHHhc-----------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHH
Confidence 1 111378999999999999999942 35889999999999999999999321 478999999999
Q ss_pred CeeeCCCCCeEEeccccccccccccccc--cccccccccccCCCcccCCC------CCCcchhhHhHHHHHHHHHhC---
Q 002857 305 NILLNDEMTACVADFGIARFLEATNEQT--SSIGVKGTTGYIAPEYGMGH------ETSSYGDVYSFGILLLEMFTG--- 373 (873)
Q Consensus 305 NILLd~~~~vKLsDFGla~~~~~~~~~~--~~~~~~Gt~~Y~APE~l~~~------~~s~ksDVwSfGvvL~ELlTG--- 373 (873)
|||++.++.+||+|||+++......... ......||..|+|||++.+. .++.++||||||+++|||+||
T Consensus 177 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~ 256 (342)
T 1b6c_B 177 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 256 (342)
T ss_dssp GEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred HEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCc
Confidence 9999999999999999998765433211 12334689999999998776 334789999999999999999
Q ss_pred -------CCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHH
Q 002857 374 -------LRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVA 446 (873)
Q Consensus 374 -------k~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~ 446 (873)
+.||............+.. .+....+... ... .....++...+.+++.+
T Consensus 257 ~~~~~~~~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~---------------~~~-~~~~~~~~~~l~~li~~ 312 (342)
T 1b6c_B 257 GGIHEDYQLPYYDLVPSDPSVEEMRK--------VVCEQKLRPN---------------IPN-RWQSCEALRVMAKIMRE 312 (342)
T ss_dssp TTBCCCCCCTTTTTSCSSCCHHHHHH--------HHTTSCCCCC---------------CCG-GGGTSHHHHHHHHHHHH
T ss_pred CCcccccccCccccCcCcccHHHHHH--------HHHHHHhCCC---------------Ccc-cccchhHHHHHHHHHHH
Confidence 6676543221111111110 0111111100 000 00012345578899999
Q ss_pred hhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 447 CSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 447 CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
||+.||++|||+.||++.|+.+.++.
T Consensus 313 cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 313 CWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp HCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HhccChhhCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999987643
No 112
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-38 Score=364.89 Aligned_cols=201 Identities=24% Similarity=0.345 Sum_probs=158.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|.+.++||+|+||.||+|++..+++.||||++..... ...+.+.+|+++|++++|+|||++++++..........
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 4689999999999999999999999999999999864322 23467899999999999999999999986544445567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+ +|+|.+++. ....+++..+..|+.||+.||+||| +.+|+||||||+||||+.++.+||
T Consensus 132 ~~lv~e~~-~~~L~~~~~----------~~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl 197 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFR----------TPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKV 197 (458)
T ss_dssp EEEEECCC-SEEHHHHHH----------SSCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEE
T ss_pred EEEEEecc-ccchhhhcc----------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEee
Confidence 99999998 579999884 3456999999999999999999999 889999999999999999999999
Q ss_pred ecccccccccccccc-------------------------ccccccccccccCCCccc-CCCCCCcchhhHhHHHHHHHH
Q 002857 317 ADFGIARFLEATNEQ-------------------------TSSIGVKGTTGYIAPEYG-MGHETSSYGDVYSFGILLLEM 370 (873)
Q Consensus 317 sDFGla~~~~~~~~~-------------------------~~~~~~~Gt~~Y~APE~l-~~~~~s~ksDVwSfGvvL~EL 370 (873)
+|||+++........ .......||..|+|||++ .+..++.++|||||||++|||
T Consensus 198 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~el 277 (458)
T 3rp9_A 198 CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277 (458)
T ss_dssp CCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred cccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHH
Confidence 999999876432111 122345689999999975 556799999999999999999
Q ss_pred HhC
Q 002857 371 FTG 373 (873)
Q Consensus 371 lTG 373 (873)
+||
T Consensus 278 ltg 280 (458)
T 3rp9_A 278 LNM 280 (458)
T ss_dssp HTT
T ss_pred HHh
Confidence 994
No 113
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=343.76 Aligned_cols=277 Identities=20% Similarity=0.260 Sum_probs=197.8
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|++++++++||||+++++++ ...+..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF-----RRKRRL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhhee-----ecCCeE
Confidence 6799999999999999999999888999999998644332 245688999999999999999999996 345678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++++|.+++. ....+++..+..|+.|++.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 78 ~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~ 144 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDR----------YQRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLC 144 (311)
T ss_dssp EEEEECCSEEHHHHHHH----------TSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCchHHHHHh----------hhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEe
Confidence 99999999999999874 2456899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccch-hhHHHHhhcC
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNL-NLQNWVQSAL 395 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~-~l~~~~~~~~ 395 (873)
|||+++....... ......||..|+|||++.+ ..++.++||||||+++|||+||+.||........ ..........
T Consensus 145 Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 222 (311)
T 4agu_A 145 DFGFARLLTGPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222 (311)
T ss_dssp CCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC
T ss_pred eCCCchhccCccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccc
Confidence 9999987643222 1223468999999999876 5689999999999999999999999976432211 0000000111
Q ss_pred chhHHHHhh-hhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVD-TLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid-~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+....... ....... .+...................+.+++.+||+.||++|||+.||++
T Consensus 223 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 223 IPRHQQVFSTNQYFSGV-------KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CHHHHHHHHTCGGGTTC-------CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccccccccccccC-------cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 111111110 0000000 000000000000001122345789999999999999999999875
No 114
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=360.41 Aligned_cols=244 Identities=24% Similarity=0.296 Sum_probs=193.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+.+|+.+++.+ +||||+++++++ ...
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~~ 96 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF-----QTP 96 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEE-----EeC
Confidence 46899999999999999999999999999999999743 223446688999999998 799999999995 556
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..+|||||+++|+|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++++
T Consensus 97 ~~~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~i 163 (353)
T 3txo_A 97 DRLFFVMEFVNGGDLMFHIQK----------SRRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHC 163 (353)
T ss_dssp SEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCE
Confidence 789999999999999999843 346899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 164 kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---------- 231 (353)
T 3txo_A 164 KLADFGMCKEGICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD---------- 231 (353)
T ss_dssp EECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------
T ss_pred EEccccceeecccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH----------
Confidence 999999998543221 22334569999999999998889999999999999999999999997532111
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKI 458 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm 458 (873)
+....+.... ..|.. ....+.+++.+||+.||++||++
T Consensus 232 -------~~~~i~~~~~----------~~p~~---------~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 232 -------LFEAILNDEV----------VYPTW---------LHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp -------HHHHHHHCCC----------CCCTT---------SCHHHHHHHHHHTCSSGGGSTTS
T ss_pred -------HHHHHHcCCC----------CCCCC---------CCHHHHHHHHHHhhhCHHHccCC
Confidence 1111111100 00100 12247789999999999999998
No 115
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.4e-40 Score=356.40 Aligned_cols=270 Identities=24% Similarity=0.374 Sum_probs=186.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHh--hhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRN--IIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~--L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|.+.+.||+|+||.||+|++ +++.||||+++. .....+..|.+++.. ++||||+++++++.... .....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~---~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEE--cCcceEEEEecc---cchhhHHHHHHHHHHHhccCcceeeeeeecccCC-Cccce
Confidence 36799999999999999999976 478999999863 334677888898887 79999999999975321 11236
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC-----CCCeeeccCCCCCeeeCCC
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC-----KPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~-----s~gIvHrDLKpsNILLd~~ 311 (873)
.++||||+++|+|.+++.. ..+++..++.++.|++.||+|||... +.+|+||||||+|||++.+
T Consensus 76 ~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~ 144 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 144 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH-----------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTT
T ss_pred eEEEEeccCCCCHHHHHhc-----------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCC
Confidence 8999999999999999942 35788899999999999999999322 5799999999999999999
Q ss_pred CCeEEeccccccccccccccc--cccccccccccCCCcccCCC------CCCcchhhHhHHHHHHHHHhC----------
Q 002857 312 MTACVADFGIARFLEATNEQT--SSIGVKGTTGYIAPEYGMGH------ETSSYGDVYSFGILLLEMFTG---------- 373 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~--~~~~~~Gt~~Y~APE~l~~~------~~s~ksDVwSfGvvL~ELlTG---------- 373 (873)
+.+||+|||+++......... ......||..|+|||++.+. .++.++||||||+++|||+||
T Consensus 145 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~ 224 (303)
T 3gxj_A 145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 224 (303)
T ss_dssp CCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CC
T ss_pred CCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCcccccee
Confidence 999999999998664433221 12234699999999998876 445789999999999999999
Q ss_pred CCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcC
Q 002857 374 LRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPG 453 (873)
Q Consensus 374 k~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~ 453 (873)
+.||.......... ......+....+..... . .....++...+.+++.+||+.||+
T Consensus 225 ~~p~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~---------------~-~~~~~~~~~~l~~li~~cl~~dP~ 280 (303)
T 3gxj_A 225 QLPYYDLVPSDPSV--------EEMRKVVCEQKLRPNIP---------------N-RWQSCEALRVMAKIMRECWYANGA 280 (303)
T ss_dssp CCTTTTTCC-CCCC--------C-CHHHHTTSCCCCCCC---------------G-GGGSSHHHHHHHHHHHTTCCSSGG
T ss_pred eccccccCCCCccH--------HHHHHHHHHhhcCCCcc---------------c-cccchhhHHHHHHHHHHHhccCcc
Confidence 44543321111000 00111111111111110 0 000113455789999999999999
Q ss_pred CCCCHHHHHHHHHHHH
Q 002857 454 ERMKINDVELGLRLIK 469 (873)
Q Consensus 454 eRPTm~EVl~~Le~i~ 469 (873)
+|||+.||++.|+.+.
T Consensus 281 ~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 281 ARLTALRIKKTLSQLS 296 (303)
T ss_dssp GSCCHHHHHHHHHC-C
T ss_pred cCCCHHHHHHHHHHhh
Confidence 9999999999999764
No 116
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.2e-38 Score=345.17 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=202.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc------chhHHHHHHHHHHhhhhccceeeeeeeeccccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD------ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~------~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~ 232 (873)
.++|.+.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|+.++++++||||+++++++ .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~ 85 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY-----E 85 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEE-----e
Confidence 45789999999999999999999989999999999754322 246799999999999999999999996 4
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
.....++||||+++++|.+++. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~ 152 (321)
T 2a2a_A 86 NRTDVVLILELVSGGELFDFLA----------QKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKN 152 (321)
T ss_dssp CSSEEEEEECCCCSCBHHHHHH----------TCSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTT
T ss_pred cCCEEEEEEEcCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCC
Confidence 5667999999999999999994 2456899999999999999999999 88999999999999999887
Q ss_pred ----CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhH
Q 002857 313 ----TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 313 ----~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~ 388 (873)
.+||+|||+++....... .....||..|+|||++.+..++.++||||||+++|||++|+.||....... ..
T Consensus 153 ~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~ 227 (321)
T 2a2a_A 153 IPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TL 227 (321)
T ss_dssp SSSCCEEECCCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HH
T ss_pred CCcCCEEEccCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH--HH
Confidence 799999999986644321 223468999999999999999999999999999999999999996532111 00
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+...... .. ..........+.+++.+||+.||++|||+.|+++
T Consensus 228 -----------~~i~~~~~~--~~-----------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 228 -----------ANITSVSYD--FD-----------------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp -----------HHHHTTCCC--CC-----------------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred -----------HHHHhcccc--cC-----------------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 011100000 00 0000111234778999999999999999999875
No 117
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=359.65 Aligned_cols=253 Identities=19% Similarity=0.241 Sum_probs=202.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||+|+||.||+|.+..+++.||+|++..........+.+|+++|++++||||+++++++ ......+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF-----EDKYEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEE-----ECSSEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEE-----EeCCEEE
Confidence 46799999999999999999999999999999999765544556799999999999999999999996 4567899
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC--CCCeEE
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND--EMTACV 316 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~--~~~vKL 316 (873)
+||||+++|+|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++. ++.+||
T Consensus 125 lv~E~~~gg~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL 192 (387)
T 1kob_A 125 LILEFLSGGELFDRIAA---------EDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKI 192 (387)
T ss_dssp EEEECCCCCBHHHHTTC---------TTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEE
T ss_pred EEEEcCCCCcHHHHHHh---------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEE
Confidence 99999999999999842 3346899999999999999999999 899999999999999974 578999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||+++....... .....||..|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 193 ~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~~-------- 259 (387)
T 1kob_A 193 IDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--TL-------- 259 (387)
T ss_dssp CCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HH--------
T ss_pred EecccceecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH--HH--------
Confidence 99999987643321 223468999999999999999999999999999999999999997532110 00
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+....+... ...+ ......+.+++.+||+.||++|||+.|+++
T Consensus 260 ---~~i~~~~~~~~-----------~~~~--------~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 260 ---QNVKRCDWEFD-----------EDAF--------SSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ---HHHHHCCCCCC-----------SSTT--------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ---HHHHhCCCCCC-----------cccc--------ccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 01100000000 0000 011234778999999999999999999865
No 118
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5e-38 Score=337.74 Aligned_cols=251 Identities=24% Similarity=0.332 Sum_probs=196.8
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.|.+.+.||+|+||.||+|.+..++..||+|++.... ....+.+.+|+.++++++||||+++++++... .......+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~ 105 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIV 105 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCceEE
Confidence 4677889999999999999999999999999987433 23446789999999999999999999987532 23456789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC--eeeccCCCCCeeeC-CCCCeE
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP--IAHCDIKPSNILLN-DEMTAC 315 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g--IvHrDLKpsNILLd-~~~~vK 315 (873)
+||||+++|+|.+++.. ...+++..++.|+.||+.||.||| +.+ |+||||||+|||++ .++.+|
T Consensus 106 lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~k 172 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKR----------FKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVK 172 (290)
T ss_dssp EEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEE
T ss_pred EEEEecCCCCHHHHHHH----------ccCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEE
Confidence 99999999999999942 245889999999999999999999 777 99999999999998 789999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||++...... ......||..|+|||++.+ .++.++||||||+++|+|++|+.||.......... .
T Consensus 173 l~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~------ 240 (290)
T 1t4h_A 173 IGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY-R------ 240 (290)
T ss_dssp ECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH-H------
T ss_pred EeeCCCccccccc----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHH-H------
Confidence 9999999754332 2223468999999998764 58999999999999999999999996532211110 0
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.......... ......+.+++.+||+.||++|||+.||++
T Consensus 241 -----~~~~~~~~~~~~---------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 241 -----RVTSGVKPASFD---------------------KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -----HHTTTCCCGGGG---------------------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----HHhccCCccccC---------------------CCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 000000000000 001124788999999999999999999875
No 119
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-38 Score=349.05 Aligned_cols=246 Identities=24% Similarity=0.307 Sum_probs=200.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|++.+.||+|+||.||+|+...+++.||+|+++.. .....+.+.+|+.+++.++||||+++++++ ....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF-----QDAQ 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE-----ECSS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE-----EeCC
Confidence 35789999999999999999999989999999999743 223446788999999999999999999985 4567
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~k 146 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRK----------SQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIK 146 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHH----------TSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEE
Confidence 89999999999999999942 346889999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 147 L~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----------- 210 (318)
T 1fot_A 147 ITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK----------- 210 (318)
T ss_dssp ECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------
T ss_pred EeecCcceecCCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-----------
Confidence 9999999865321 223569999999999999999999999999999999999999996521110
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-----CHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-----KINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-----Tm~EVl~ 463 (873)
....++...+ ..|. . ....+.+++.+||+.||++|| ++.||++
T Consensus 211 --~~~~i~~~~~--------------~~p~--~-------~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 211 --TYEKILNAEL--------------RFPP--F-------FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --HHHHHHHCCC--------------CCCT--T-------SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --HHHHHHhCCC--------------CCCC--C-------CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 0111111100 0010 0 012477899999999999999 7887753
No 120
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=8.2e-38 Score=341.93 Aligned_cols=280 Identities=16% Similarity=0.196 Sum_probs=202.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|++.+.||+|+||.||+|++..+++.||||+++. ...+.+.+|++++++++ |+||+++++++.. ......
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~---~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKD---PVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEEC---TTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeecc---CCCCce
Confidence 3678999999999999999999999999999999863 33577999999999997 9999999999742 235678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC-CeEE
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM-TACV 316 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~-~vKL 316 (873)
++||||+++++|.+++. .+++..++.|+.||+.||+||| +.+|+||||||+|||++.++ .+||
T Consensus 109 ~lv~e~~~~~~l~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl 172 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ-------------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRL 172 (330)
T ss_dssp EEEEECCCCCCHHHHGG-------------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEE
T ss_pred EEEEeccCchhHHHHHH-------------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEE
Confidence 99999999999999883 2788899999999999999999 89999999999999999776 8999
Q ss_pred eccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+++....... .....++..|+|||++.+ ..++.++||||||+++|||++|+.||.........+.......-
T Consensus 173 ~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~ 249 (330)
T 3nsz_A 173 IDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 249 (330)
T ss_dssp CCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC
T ss_pred EeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcC
Confidence 99999986644322 223458999999999877 67899999999999999999999999653332222222222211
Q ss_pred chhHHHHhhhhhhh-hhhHHHHHhhhccCCCCchh-HHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFK-EIEEEETVYKYKKAPSSSTQ-RSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~-~~~~r~~~~~i~~~p~~~~~-~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.+.+.++..-.. ...............+.... ..........+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 250 TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 12222222111100 00000000000000000000 0000011345889999999999999999999875
No 121
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.5e-38 Score=355.27 Aligned_cols=254 Identities=22% Similarity=0.277 Sum_probs=192.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|.+.+.||+|+||.||++++..+++.||||++..... ..+.+.+|+.++++++||||+++++++ ......+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~~~ 92 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVI-----LTPTHLA 92 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEE-----eeCCEEE
Confidence 4689999999999999999999998999999999975432 346789999999999999999999996 4566799
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC--eEE
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT--ACV 316 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~--vKL 316 (873)
+||||+++|+|.+++.. ...+++..++.|+.||+.||+||| +.+|+||||||+|||++.++. +||
T Consensus 93 lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl 159 (361)
T 3uc3_A 93 IIMEYASGGELYERICN----------AGRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKI 159 (361)
T ss_dssp EEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEE
T ss_pred EEEEeCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEE
Confidence 99999999999999842 345899999999999999999999 899999999999999987765 999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcc-hhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSY-GDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~k-sDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+++...... ......||+.|+|||++.+..++.+ +||||||+++|||++|+.||....... .+
T Consensus 160 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~-------- 227 (361)
T 3uc3_A 160 CDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DY-------- 227 (361)
T ss_dssp CCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CH--------
T ss_pred eecCccccccccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HH--------
Confidence 9999997432221 2233469999999999988887666 899999999999999999997632211 11
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..++...+.... ..|... .....+.+|+.+||+.||++|||+.|+++.
T Consensus 228 ----~~~~~~~~~~~~----------~~~~~~-------~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 228 ----RKTIQRILSVKY----------SIPDDI-------RISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ----HHHHHHHHTTCC----------CCCTTS-------CCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ----HHHHHHHhcCCC----------CCCCcC-------CCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 111111111100 000000 012247789999999999999999999764
No 122
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-38 Score=338.37 Aligned_cols=261 Identities=24% Similarity=0.400 Sum_probs=205.6
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
..++|++.+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|++++++++||||+++++++. .+..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~ 82 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPI 82 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc------CCCc
Confidence 3467899999999999999999874 56789999987543 34578999999999999999999999853 3457
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++++|.+++.. .....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 83 ~~v~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~ 151 (279)
T 1qpc_A 83 YIITEYMENGSLVDFLKT--------PSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 151 (279)
T ss_dssp EEEEECCTTCBHHHHTTS--------HHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCCHHHHHhc--------CCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEEC
Confidence 899999999999999953 11235889999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+++....... .......++..|+|||++.+..++.++||||||+++|||++ |+.||....... ...
T Consensus 152 Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~------- 221 (279)
T 1qpc_A 152 DFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQ------- 221 (279)
T ss_dssp CCTTCEECSSSCE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHH-------
T ss_pred CCcccccccCccc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHH-------
Confidence 9999987643321 12223446789999999988889999999999999999999 999986532111 000
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhh
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLL 473 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~ 473 (873)
.+... ... ..+. .+...+.+++.+||+.+|++|||+.+|++.|+.+.....
T Consensus 222 ----~~~~~-~~~------------~~~~---------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 222 ----NLERG-YRM------------VRPD---------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp ----HHHTT-CCC------------CCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ----HHhcc-cCC------------CCcc---------cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 00000 000 0000 112357889999999999999999999999999876543
No 123
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=358.12 Aligned_cols=262 Identities=23% Similarity=0.401 Sum_probs=195.5
Q ss_pred CCCcceeecccCceEEEEEEEcCCC---cEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGA---PAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g---~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.|.+.+.||+|+||.||+|++..++ ..||||.++... ....+.|.+|+.++++++||||++++++|. ..++.
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~----~~~~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEEC----CCSSC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE----cCCCC
Confidence 3566789999999999999875432 468999986433 334578999999999999999999999863 34456
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 166 ~~lv~e~~~~g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL 233 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKV 233 (373)
T ss_dssp CEEEEECCTTCBHHHHHHC---------TTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEE
T ss_pred eEEEEECCCCCCHHHHHhh---------cccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEE
Confidence 7899999999999999953 3456889999999999999999999 899999999999999999999999
Q ss_pred ecccccccccccccc--ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 317 ADFGIARFLEATNEQ--TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 317 sDFGla~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+|||+++........ .......+|..|+|||++.+..++.++||||||+++|||+| |..||....... ....+
T Consensus 234 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~-- 309 (373)
T 3c1x_A 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYL-- 309 (373)
T ss_dssp CCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHH--
T ss_pred eeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHH--
Confidence 999999865433211 11223457889999999999999999999999999999999 677776532211 11110
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhh
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLL 473 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~ 473 (873)
...... ..|. .+...+.+++.+||+.||++|||+.||++.|+.+...+.
T Consensus 310 ---------~~~~~~-------------~~p~---------~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 310 ---------LQGRRL-------------LQPE---------YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp ---------HTTCCC-------------CCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred ---------HcCCCC-------------CCCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 000000 0000 112357889999999999999999999999999877664
No 124
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.2e-38 Score=356.10 Aligned_cols=205 Identities=24% Similarity=0.354 Sum_probs=164.7
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~ 234 (873)
..++|++.+.||+|+||.||+|.+..+++.||||++... .......+.+|+.++.++. |+||+++++++.. .+.
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~~~ 83 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---DND 83 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---TTS
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---CCC
Confidence 457899999999999999999999999999999998643 2233467889999999997 9999999999742 234
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||++ |+|.+++.. ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~ 148 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRA-----------NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHV 148 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHH-----------TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCE
T ss_pred CEEEEEecccC-cCHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCE
Confidence 57899999997 599998842 35888999999999999999999 8999999999999999999999
Q ss_pred EEecccccccccccc-------------------ccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCC
Q 002857 315 CVADFGIARFLEATN-------------------EQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGL 374 (873)
Q Consensus 315 KLsDFGla~~~~~~~-------------------~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk 374 (873)
||+|||+++.+.... .........||..|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 149 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 228 (388)
T 3oz6_A 149 KVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228 (388)
T ss_dssp EECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCC
Confidence 999999998653211 0111233569999999999887 67899999999999999999999
Q ss_pred CCCCcc
Q 002857 375 RPSDDM 380 (873)
Q Consensus 375 ~Pf~~~ 380 (873)
.||...
T Consensus 229 ~pf~~~ 234 (388)
T 3oz6_A 229 PIFPGS 234 (388)
T ss_dssp CSCCCS
T ss_pred CCCCCC
Confidence 999763
No 125
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=357.87 Aligned_cols=247 Identities=21% Similarity=0.262 Sum_probs=193.9
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEEeec
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVYEFM 244 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~ 244 (873)
.+.||+|+||.||+|.+..+++.||||+++.......+.+.+|+++|++++||||+++++++ ...+..+|||||+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF-----ESKNDIVLVMEYV 168 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSEEEEEEECC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEEEEEeCC
Confidence 57899999999999999999999999999865555667899999999999999999999996 4466799999999
Q ss_pred CCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee--CCCCCeEEeccccc
Q 002857 245 PNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL--NDEMTACVADFGIA 322 (873)
Q Consensus 245 ~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL--d~~~~vKLsDFGla 322 (873)
++|+|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||++
T Consensus 169 ~~~~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a 236 (373)
T 2x4f_A 169 DGGELFDRIID---------ESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLA 236 (373)
T ss_dssp TTCEEHHHHHH---------TGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSC
T ss_pred CCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCc
Confidence 99999998842 2345889999999999999999999 8999999999999999 57789999999999
Q ss_pred cccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHH
Q 002857 323 RFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEI 402 (873)
Q Consensus 323 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~el 402 (873)
+.+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+..+
T Consensus 237 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------------~~~~i 300 (373)
T 2x4f_A 237 RRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-------------TLNNI 300 (373)
T ss_dssp EECCTTCB---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-------------HHHHH
T ss_pred eecCCccc---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-------------HHHHH
Confidence 87644322 223458999999999999999999999999999999999999997532111 11111
Q ss_pred hhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 403 VDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 403 id~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+....... ... .......+.+|+.+||+.||++|||+.|+++
T Consensus 301 ~~~~~~~~---------------~~~----~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 301 LACRWDLE---------------DEE----FQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHTCCCSC---------------SGG----GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HhccCCCC---------------hhh----hccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11110000 000 0011235788999999999999999999986
No 126
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.9e-38 Score=339.55 Aligned_cols=261 Identities=20% Similarity=0.332 Sum_probs=202.4
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCC---CcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEG---APAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~---g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
..++|.+.+.||+|+||.||+|++..+ +..||||++.... ....+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------ 83 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE------ 83 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC------
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc------
Confidence 356889999999999999999987543 3469999987542 234567999999999999999999999853
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
.+..++||||+++++|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 84 ~~~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~ 151 (281)
T 3cc6_A 84 EEPTWIIMELYPYGELGHYLER---------NKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPEC 151 (281)
T ss_dssp SSSCEEEEECCTTCBHHHHHHH---------HTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTE
T ss_pred CCCCEEEEecCCCCCHHHHHHh---------ccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCc
Confidence 2346899999999999999953 2345889999999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||+| |+.||....... ....+
T Consensus 152 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~- 227 (281)
T 3cc6_A 152 VKLGDFGLSRYIEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVL- 227 (281)
T ss_dssp EEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHH-
T ss_pred EEeCccCCCcccccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHH-
Confidence 99999999986644321 11223457889999999988899999999999999999998 999996532211 11100
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
.... ..+... .+...+.+++.+||+.||++|||+.||++.|+.+....
T Consensus 228 ----------~~~~---------------~~~~~~-------~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 228 ----------EKGD---------------RLPKPD-------LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp ----------HHTC---------------CCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----------hcCC---------------CCCCCC-------CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 0000 000000 01234788999999999999999999999999986543
No 127
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.9e-38 Score=356.39 Aligned_cols=253 Identities=21% Similarity=0.292 Sum_probs=191.5
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--------CcchhHHHHHHHHHHhhhhccceeeeeeeecc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--------HDASKSFTVECEVMRNIIHRKIIKVVTACSRV 229 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--------~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~ 229 (873)
..++|.+.+.||+|+||.||+|.+..+++.||||++.... ......+.+|+++|++++||||+++++++.
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-- 210 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-- 210 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE--
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence 4678999999999999999999999999999999987432 112245889999999999999999999852
Q ss_pred cccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 230 DYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
.+..++||||+++|+|.+++. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++
T Consensus 211 ----~~~~~lv~e~~~~g~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~ 273 (419)
T 3i6u_A 211 ----AEDYYIVLELMEGGELFDKVV----------GNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLS 273 (419)
T ss_dssp ----SSEEEEEEECCTTCBGGGGTS----------SSCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEES
T ss_pred ----cCceEEEEEcCCCCcHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEe
Confidence 345799999999999999884 3456899999999999999999999 88999999999999997
Q ss_pred CC---CCeEEeccccccccccccccccccccccccccCCCcccCC---CCCCcchhhHhHHHHHHHHHhCCCCCCccccc
Q 002857 310 DE---MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG---HETSSYGDVYSFGILLLEMFTGLRPSDDMFKD 383 (873)
Q Consensus 310 ~~---~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~ 383 (873)
.+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||||+++|||+||+.||......
T Consensus 274 ~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~ 350 (419)
T 3i6u_A 274 SQEEDCLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 350 (419)
T ss_dssp SSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS
T ss_pred cCCCcceEEEeecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch
Confidence 54 469999999998764322 2234569999999999864 57888999999999999999999999753221
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. .+...+... .... . ..........+.+++.+||+.||++|||+.|+++
T Consensus 351 ~-~~~~~i~~~-----------~~~~-~------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 351 V-SLKDQITSG-----------KYNF-I------------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp C-CHHHHHHTT-----------CCCC-C------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred H-HHHHHHhcC-----------CCCC-C------------------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1 111111100 0000 0 0000112335788999999999999999999875
No 128
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=351.99 Aligned_cols=253 Identities=23% Similarity=0.333 Sum_probs=192.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhh--ccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIH--RKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~H--pNIV~llg~c~~~~~~~~ 234 (873)
.++|++.+.||+|+||.||++.+ .+++.||||++..... ...+.+.+|+++|.+++| +||+++++++ ...
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~-----~~~ 81 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----ITD 81 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE-----eeC
Confidence 45799999999999999999987 5688999999874432 234678999999999976 9999999996 456
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...+|||| +.+|+|.+++.. ...+++.+++.|+.||+.||+||| +.+|+||||||+|||++ ++.+
T Consensus 82 ~~~~lv~e-~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~ 146 (343)
T 3dbq_A 82 QYIYMVME-CGNIDLNSWLKK----------KKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGML 146 (343)
T ss_dssp SEEEEEEC-CCSEEHHHHHHH----------SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEE
T ss_pred CEEEEEEe-CCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcE
Confidence 68999999 568899999942 356889999999999999999999 88999999999999997 5789
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCC-----------CCCCcchhhHhHHHHHHHHHhCCCCCCccccc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-----------HETSSYGDVYSFGILLLEMFTGLRPSDDMFKD 383 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----------~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~ 383 (873)
||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 147 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 226 (343)
T 3dbq_A 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226 (343)
T ss_dssp EECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred EEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH
Confidence 9999999987654433333344579999999999854 67899999999999999999999999753221
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.. .+..+++...... .|.. ....+.+++.+||+.||++|||+.||++
T Consensus 227 ~~------------~~~~~~~~~~~~~------------~~~~---------~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 227 IS------------KLHAIIDPNHEIE------------FPDI---------PEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp HH------------HHHHHHCTTSCCC------------CCCC---------SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HH------------HHHHHhcCCcccC------------Cccc---------CCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 11 1111221111100 0000 0124778999999999999999999986
Q ss_pred HH
Q 002857 464 GL 465 (873)
Q Consensus 464 ~L 465 (873)
.-
T Consensus 274 hp 275 (343)
T 3dbq_A 274 HP 275 (343)
T ss_dssp SH
T ss_pred Cc
Confidence 53
No 129
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.9e-38 Score=347.66 Aligned_cols=267 Identities=23% Similarity=0.349 Sum_probs=201.0
Q ss_pred hcCCCcceeecccCceEEEEEE-----EcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeeccccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGI-----LFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~-----~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~ 232 (873)
.++|.+.+.||+|+||.||+|+ ...+++.||||++.... ......+.+|+.++++++||||+++++++ .
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~ 103 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-----L 103 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEE-----c
Confidence 4678999999999999999998 44567899999996432 23446789999999999999999999996 3
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC--
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND-- 310 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~-- 310 (873)
.....++||||+++|+|.+++.... ........+++..++.++.||+.||.||| +.+|+||||||+|||++.
T Consensus 104 ~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 104 QSLPRFILMELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTS---CCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSS
T ss_pred CCCCcEEEEecCCCCcHHHHHHhhc---ccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCC
Confidence 4556799999999999999996411 11122356899999999999999999999 889999999999999984
Q ss_pred -CCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhH
Q 002857 311 -EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 311 -~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~ 388 (873)
+..+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||+| |+.||...... ...
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~ 255 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVL 255 (327)
T ss_dssp TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH
T ss_pred CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHH
Confidence 45699999999986544333233334567899999999988899999999999999999998 99998653211 111
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
..+ ..... .. .+. .+...+.+++.+||+.||++|||+.||++.|+.+
T Consensus 256 ~~~-----------~~~~~-~~------------~~~---------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 256 EFV-----------TSGGR-MD------------PPK---------NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HHH-----------HTTCC-CC------------CCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHH-----------hcCCC-CC------------CCC---------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 110 00000 00 000 0123478899999999999999999999999987
Q ss_pred HHh
Q 002857 469 KKK 471 (873)
Q Consensus 469 ~~~ 471 (873)
...
T Consensus 303 ~~~ 305 (327)
T 2yfx_A 303 TQD 305 (327)
T ss_dssp HHC
T ss_pred hcC
Confidence 653
No 130
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.5e-38 Score=345.68 Aligned_cols=268 Identities=21% Similarity=0.262 Sum_probs=196.4
Q ss_pred cCCCcc-eeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSE-NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~-~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
+.|.+. ++||+|+||.||+|++..+++.||||++..........+.+|++++.++ +||||+++++++ ...+..
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~-----~~~~~~ 86 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF-----EEEDRF 86 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEE-----eeCCEE
Confidence 567774 7899999999999999889999999999866555667899999999995 799999999996 346689
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC---e
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT---A 314 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~---v 314 (873)
++||||+++|+|.+++.. ...+++..++.|+.||+.||+||| +.+|+||||||+|||++.++. +
T Consensus 87 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~ 153 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHK----------RRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPV 153 (316)
T ss_dssp EEEEECCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSE
T ss_pred EEEEEcCCCCcHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCce
Confidence 999999999999999953 246889999999999999999999 889999999999999998765 9
Q ss_pred EEeccccccccccccc-----cccccccccccccCCCcccCC-----CCCCcchhhHhHHHHHHHHHhCCCCCCcccccc
Q 002857 315 CVADFGIARFLEATNE-----QTSSIGVKGTTGYIAPEYGMG-----HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDN 384 (873)
Q Consensus 315 KLsDFGla~~~~~~~~-----~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~ 384 (873)
||+|||+++....... ........||..|+|||++.+ ..++.++||||||+++|||++|+.||.......
T Consensus 154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 233 (316)
T 2ac3_A 154 KICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233 (316)
T ss_dssp EECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSC
T ss_pred EEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccc
Confidence 9999999986543211 111223458999999999875 457899999999999999999999997643222
Q ss_pred hhhHHHHhhcCch-hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 385 LNLQNWVQSALPE-RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 385 ~~l~~~~~~~~~~-~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+ ....... ....+......... .... .........+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~---~~~~~~~~~~~~~~~~i~~~~~------------~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 234 CGW---DRGEACPACQNMLFESIQEGKY------------EFPD---KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp SCC-------CCHHHHHHHHHHHHHCCC------------CCCH---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccc---cccccchhHHHHHHHHHhccCc------------ccCc---hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 110 0000000 01111111100000 0000 000112335789999999999999999999865
No 131
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.5e-38 Score=357.39 Aligned_cols=201 Identities=24% Similarity=0.309 Sum_probs=175.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|++.++||+|+||.||+|++..+++.||||+++... ....+.+..|..+|.++ +||||+++++++ ...
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTE 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEE-----ECS
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE-----EEC
Confidence 467999999999999999999999999999999997542 23345688999999988 899999999985 556
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...+|||||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++++
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~i 192 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQR----------QRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHI 192 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCE
Confidence 789999999999999999842 346899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 193 kL~DFGla~~~~~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 193 KLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp EECCCTTCBCCCCTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred EEeecceeeecccCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 999999998532221 223345799999999999999999999999999999999999999964
No 132
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=355.50 Aligned_cols=249 Identities=23% Similarity=0.304 Sum_probs=198.7
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|.+.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+++|+.++||||+++++++ .....
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~~~ 89 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF-----QDEED 89 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCCE
Confidence 5789999999999999999999999999999998642 233456789999999999999999999985 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+.+|+|.+++. ....+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||
T Consensus 90 ~~lv~e~~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL 156 (384)
T 4fr4_A 90 MFMVVDLLLGGDLRYHLQ----------QNVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHI 156 (384)
T ss_dssp EEEEECCCTTEEHHHHHH----------TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEE
Confidence 999999999999999984 3456899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCC---CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG---HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+|||+++.+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 157 ~DFG~a~~~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~-------- 225 (384)
T 4fr4_A 157 TDFNIAAMLPRET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-------- 225 (384)
T ss_dssp CCCTTCEECCTTC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH--------
T ss_pred eccceeeeccCCC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH--------
Confidence 9999998764322 2234569999999999874 4589999999999999999999999975322110
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCC-HHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMK-INDVE 462 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPT-m~EVl 462 (873)
.+++....... ...|. .....+.+|+.+||+.||++||+ +.+|.
T Consensus 226 ------~~~~~~~~~~~----------~~~p~---------~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 226 ------KEIVHTFETTV----------VTYPS---------AWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp ------HHHHHHHHHCC----------CCCCT---------TSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred ------HHHHHHHhhcc----------cCCCC---------cCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 11111000000 00010 01234788999999999999998 55553
No 133
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=363.64 Aligned_cols=254 Identities=19% Similarity=0.257 Sum_probs=201.0
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
..++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++ ...+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~~~~ 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI-----SEEG 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEE-----ECSS
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEE-----EECC
Confidence 35679999999999999999999999999999999875432 2345789999999999999999999995 4567
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC---CCC
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN---DEM 312 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd---~~~ 312 (873)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++ .++
T Consensus 84 ~~~lv~E~~~gg~L~~~i~~----------~~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~ 150 (444)
T 3soa_A 84 HHYLIFDLVTGGELFEDIVA----------REYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGA 150 (444)
T ss_dssp EEEEEECCCBCCBHHHHHHH----------CSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTC
T ss_pred EEEEEEEeCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCC
Confidence 89999999999999999842 356899999999999999999999 89999999999999998 567
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||....... +.
T Consensus 151 ~vkL~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~--~~---- 222 (444)
T 3soa_A 151 AVKLADFGLAIEVEGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR--LY---- 222 (444)
T ss_dssp CEEECCCSSCBCCCTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HH----
T ss_pred cEEEccCceeEEecCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH--HH----
Confidence 89999999998664432 22234569999999999999999999999999999999999999996532111 00
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+........ ...+. .....+.+++.+||+.||++|||+.|+++
T Consensus 223 -------~~i~~~~~~~~-----------~~~~~--------~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 223 -------QQIKAGAYDFP-----------SPEWD--------TVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp -------HHHHHTCCCCC-----------TTTTT--------TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -------HHHHhCCCCCC-----------ccccc--------cCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11111000000 00000 11234778999999999999999999986
No 134
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=7.9e-39 Score=368.12 Aligned_cols=258 Identities=28% Similarity=0.439 Sum_probs=199.7
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
...++|.+.+.||+|+||.||+|.+. ++..||||+++.... ..+.|.+|+++|++++||||+++++++. .+.
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~------~~~ 252 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEP 252 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSS
T ss_pred cChhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEc------CCc
Confidence 34567889999999999999999985 456799999975432 3478999999999999999999999963 245
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+++|+|.++|.. .....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 253 ~~iv~e~~~~gsL~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl 321 (452)
T 1fmk_A 253 IYIVTEYMSKGSLLDFLKG--------ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKV 321 (452)
T ss_dssp CEEEECCCTTCBHHHHHSH--------HHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred eEEEehhhcCCCHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEE
Confidence 7999999999999999953 12245889999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+++...... ........++..|+|||++.+..++.++||||||+++|||+| |+.||....... ..
T Consensus 322 ~DfG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~------- 391 (452)
T 1fmk_A 322 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VL------- 391 (452)
T ss_dssp CCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HH-------
T ss_pred CCCccceecCCCc-eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HH-------
Confidence 9999998764322 112223447889999999998899999999999999999999 999997532111 00
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
+.+.... ..+.. ..+...+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 392 -----~~i~~~~--------------~~~~~-------~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 392 -----DQVERGY--------------RMPCP-------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp -----HHHHTTC--------------CCCCC-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred -----HHHHcCC--------------CCCCC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 0000000 00000 012345788999999999999999999999998763
No 135
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-38 Score=347.67 Aligned_cols=262 Identities=27% Similarity=0.442 Sum_probs=198.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCC----cEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGA----PAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g----~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
++|...+.||+|+||.||+|.+..++ ..||||+++.... .....+.+|++++++++||||+++++++ ...
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 118 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-----SKY 118 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----ecC
Confidence 46777899999999999999886543 3599999975432 2345789999999999999999999996 445
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..+|||||+++|+|.+++.. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~ 186 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLRE---------KDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVC 186 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHH---------TTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCE
T ss_pred CCcEEEEeCCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcE
Confidence 678999999999999999953 3456899999999999999999999 8899999999999999999999
Q ss_pred EEeccccccccccccccc-cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 315 CVADFGIARFLEATNEQT-SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
||+|||+++......... ......+|..|+|||++.+..++.++||||||+++|||++ |+.||....... +.
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~---- 260 (333)
T 1mqb_A 187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VM---- 260 (333)
T ss_dssp EECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HH----
T ss_pred EECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HH----
Confidence 999999998764432211 1222346788999999998999999999999999999999 999996532111 00
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
..+.+.. ..+... .+...+.+++.+||+.+|++||++.||++.|+.+....
T Consensus 261 -------~~~~~~~---------------~~~~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 261 -------KAINDGF---------------RLPTPM-------DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp -------HHHHTTC---------------CCCCCT-------TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred -------HHHHCCC---------------cCCCcc-------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 0010000 000000 11235788999999999999999999999999987644
Q ss_pred h
Q 002857 473 L 473 (873)
Q Consensus 473 ~ 473 (873)
.
T Consensus 312 ~ 312 (333)
T 1mqb_A 312 D 312 (333)
T ss_dssp G
T ss_pred h
Confidence 3
No 136
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.8e-38 Score=341.54 Aligned_cols=200 Identities=24% Similarity=0.378 Sum_probs=168.0
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|++.+.||+|+||.||+|++ .+++.||||++..... ...+.+.+|++++++++||||+++++++ ...+..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI-----HTKKRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEE-----ECSSCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEE-----ccCCeE
Confidence 5789999999999999999988 6788999999864432 2346788999999999999999999996 445678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++ +|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~ 142 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDV---------CEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIA 142 (288)
T ss_dssp EEEEECCSE-EHHHHHHT---------STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecCC-CHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEe
Confidence 999999975 99998842 3356889999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|||+++...... .......+|..|+|||++.+. .++.++||||||+++|||+||+.||...
T Consensus 143 Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (288)
T 1ob3_A 143 DFGLARAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204 (288)
T ss_dssp CTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ECccccccCccc--cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999998654321 112234589999999998764 5899999999999999999999999763
No 137
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.8e-38 Score=339.27 Aligned_cols=249 Identities=22% Similarity=0.314 Sum_probs=198.7
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
+.++|++.+.||+|+||.||+|.+..++..||||++.... ......+.+|+.++++++||||+++++++ ...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDA 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheE-----ecC
Confidence 3568999999999999999999999999999999986322 22346789999999999999999999996 456
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+++|+|.+++.. ...+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~ 148 (279)
T 3fdn_A 82 TRVYLILEYAPLGTVYRELQK----------LSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGEL 148 (279)
T ss_dssp SEEEEEECCCTTEEHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCE
T ss_pred CEEEEEEecCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCE
Confidence 678999999999999999843 245889999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
||+|||++....... .....||..|+|||++.+..++.++||||||+++|||++|+.||....... .
T Consensus 149 ~l~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~------- 215 (279)
T 3fdn_A 149 KIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--T------- 215 (279)
T ss_dssp EECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--H-------
T ss_pred EEEeccccccCCccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH--H-------
Confidence 999999986543321 223468999999999999999999999999999999999999997532110 0
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
...+..... ..|. .....+.+++.+||+.||++|||+.||++.
T Consensus 216 ----~~~~~~~~~--------------~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 216 ----YKRISRVEF--------------TFPD---------FVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ----HHHHHHTCC--------------CCCT---------TSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ----HHHHHhCCC--------------CCCC---------cCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 0000 012247789999999999999999999874
No 138
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5e-38 Score=335.97 Aligned_cols=252 Identities=21% Similarity=0.308 Sum_probs=200.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++ .....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE-----EcCCE
Confidence 5789999999999999999999999999999999974432 2346788999999999999999999996 45667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC---
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT--- 313 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~--- 313 (873)
.++||||+++++|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 80 ~~~v~e~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~ 146 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVA----------REFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAA 146 (284)
T ss_dssp EEEEECCCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCC
T ss_pred EEEEEecCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCc
Confidence 8999999999999998842 345899999999999999999999 899999999999999986655
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+||+|||++........ .....||..|+|||++.+..++.++||||||+++|+|++|+.||....... ..
T Consensus 147 ~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~----- 216 (284)
T 3kk8_A 147 VKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LY----- 216 (284)
T ss_dssp EEECCCTTCEECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH-----
T ss_pred EEEeeceeeEEcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH--HH-----
Confidence 99999999976543222 223568999999999999999999999999999999999999996532111 00
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+...... .+.. . .......+.+++.+||+.||++|||+.|+++
T Consensus 217 ------~~~~~~~~~--------------~~~~-~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 217 ------AQIKAGAYD--------------YPSP-E----WDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ------HHHHHTCCC--------------CCTT-T----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------HHHHhcccc--------------CCch-h----hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000000000 0000 0 0011234778999999999999999999976
No 139
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-38 Score=338.91 Aligned_cols=246 Identities=25% Similarity=0.339 Sum_probs=177.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++ ...+.
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSKDE 87 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSC
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----ecCCe
Confidence 57999999999999999999998899999999986432 23346789999999999999999999996 44567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+ +++|.+++. ....+++.+++.++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 88 ~~lv~e~~-~~~l~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl 153 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIV----------QRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKI 153 (275)
T ss_dssp EEEEEECC-CEEHHHHHH----------TSSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEE
T ss_pred EEEEehhc-CCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEE
Confidence 89999999 678888874 2356899999999999999999999 889999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+++....... .....||..|+|||++.+..+ +.++||||||+++|||++|+.||....... .
T Consensus 154 ~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~-------- 220 (275)
T 2eue_A 154 ADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--L-------- 220 (275)
T ss_dssp CCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH--H--------
T ss_pred eecccceeccCccc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--H--------
Confidence 99999986543321 223458999999999988765 789999999999999999999997532110 0
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...+..... ..|. .....+.+++.+||+.||++|||+.|+++
T Consensus 221 ---~~~~~~~~~--------------~~~~---------~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 221 ---FKNISNGVY--------------TLPK---------FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---HHHHHHTCC--------------CCCT---------TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---HHHHHhCCC--------------CCCc---------cCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 000100000 0000 01224778999999999999999999865
No 140
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=8.4e-38 Score=346.94 Aligned_cols=292 Identities=19% Similarity=0.194 Sum_probs=202.3
Q ss_pred CHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc-----------hhHHHHHHHHHHhhhhccc
Q 002857 151 SYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA-----------SKSFTVECEVMRNIIHRKI 219 (873)
Q Consensus 151 s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~-----------~~~f~~Ei~iL~~L~HpNI 219 (873)
...++....++|.+.+.||+|+||.||+|.+. +++.||||++....... .+.+.+|++++++++||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 35678888999999999999999999999875 48899999986432211 2678999999999999999
Q ss_pred eeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeec
Q 002857 220 IKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHC 299 (873)
Q Consensus 220 V~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHr 299 (873)
+++++++...........++||||+. |+|.+++.. ....+++..++.|+.||+.||.||| +.+|+||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 158 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD---------QRIVISPQHIQYFMYHILLGLHVLH---EAGVVHR 158 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC---------TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHH---HCcCEec
Confidence 99999975543344557899999997 688888742 3456899999999999999999999 8899999
Q ss_pred cCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCC
Q 002857 300 DIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSD 378 (873)
Q Consensus 300 DLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~ 378 (873)
||||+|||++.++.+||+|||+++...... ......+|..|+|||++.+ ..++.++||||||+++|||++|+.||.
T Consensus 159 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 235 (362)
T 3pg1_A 159 DLHPGNILLADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235 (362)
T ss_dssp CCCGGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCChHHEEEcCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCC
Confidence 999999999999999999999998543322 2233468999999999877 678999999999999999999999997
Q ss_pred cccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCH
Q 002857 379 DMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKI 458 (873)
Q Consensus 379 ~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm 458 (873)
...... .+.............+.... ...............................+.+++.+||+.||++|||+
T Consensus 236 ~~~~~~-~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 311 (362)
T 3pg1_A 236 GSTFYN-QLNKIVEVVGTPKIEDVVMF---SSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIST 311 (362)
T ss_dssp CSSHHH-HHHHHHHHHCCCCHHHHHHT---SCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCHHH-HHHHHHHHcCCCChHHhhhc---cchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCH
Confidence 632211 11111111111111111000 00000000000000000000111111223457899999999999999999
Q ss_pred HHHHH
Q 002857 459 NDVEL 463 (873)
Q Consensus 459 ~EVl~ 463 (873)
.|+++
T Consensus 312 ~ell~ 316 (362)
T 3pg1_A 312 EQALR 316 (362)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 99864
No 141
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=9.2e-39 Score=355.48 Aligned_cols=249 Identities=23% Similarity=0.307 Sum_probs=199.6
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhh-hhccceeeeeeeeccccc
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~ 232 (873)
...++|.+.+.||+|+||.||+|++..+++.||||+++... ......+..|..++..+ +||||+++++++ .
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~-----~ 88 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF-----Q 88 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE-----E
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE-----E
Confidence 45678999999999999999999999999999999997432 33456788899999987 999999999985 4
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
..+..++||||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++
T Consensus 89 ~~~~~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g 155 (345)
T 1xjd_A 89 TKENLFFVMEYLNGGDLMYHIQS----------CHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDG 155 (345)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTS
T ss_pred eCCEEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCC
Confidence 56789999999999999999842 345889999999999999999999 89999999999999999999
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
++||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 156 ~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-------- 225 (345)
T 1xjd_A 156 HIKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-------- 225 (345)
T ss_dssp CEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------
T ss_pred CEEEeEChhhhhcccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH--------
Confidence 99999999998543222 12334569999999999999999999999999999999999999997532111
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHH-HH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKIN-DV 461 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~-EV 461 (873)
+........+ ..|. .....+.+++.+||+.||++||++. ||
T Consensus 226 ---------~~~~i~~~~~----------~~p~---------~~s~~~~~li~~lL~~dp~~R~~~~~~i 267 (345)
T 1xjd_A 226 ---------LFHSIRMDNP----------FYPR---------WLEKEAKDLLVKLFVREPEKRLGVRGDI 267 (345)
T ss_dssp ---------HHHHHHHCCC----------CCCT---------TSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred ---------HHHHHHhCCC----------CCCc---------ccCHHHHHHHHHHhcCCHhHcCCChHHH
Confidence 1111110000 0000 0122477899999999999999997 54
No 142
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.4e-37 Score=359.23 Aligned_cols=204 Identities=24% Similarity=0.237 Sum_probs=169.4
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeecccc-cCC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY-QGN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~-~~~ 234 (873)
..++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+.+|+.++||||+++++++..... ...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 357899999999999999999999999999999999743 23345678899999999999999999999754321 234
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...+|||||+++ +|.+.+. ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~------------~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~ 203 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 203 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT------------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCE
T ss_pred CeEEEEEeCCCC-CHHHHHh------------hcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCE
Confidence 568999999976 5666652 23888999999999999999999 8899999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
||+|||+++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 204 kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 204 KILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp EECCCCCC-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEEEEEeeeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999998664321 223456999999999999999999999999999999999999999763
No 143
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-38 Score=352.67 Aligned_cols=248 Identities=25% Similarity=0.330 Sum_probs=198.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|.+.+.||+|+||.||+|.+..+++.||||++... .......+.+|+.+++.++||||+++++++ ....
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI-----TTPT 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCC
Confidence 36899999999999999999999999999999998632 223346789999999999999999999996 4566
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+ +|+|.+++.. ...+++.+++.++.||+.||.||| +.+|+||||||+|||++.++.+|
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~----------~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~k 148 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVE----------KKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVK 148 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEE
T ss_pred EEEEEEECC-CCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEE
Confidence 799999999 7899998842 346899999999999999999999 88999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++....... .....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||........
T Consensus 149 l~DFG~s~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--------- 216 (336)
T 3h4j_B 149 IADFGLSNIMTDGNF---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--------- 216 (336)
T ss_dssp ECCSSCTBTTTTSBT---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---------
T ss_pred EEEeccceeccCCcc---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---------
Confidence 999999986644322 223469999999999988876 7899999999999999999999975321110
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
........+ ..|.. ....+.+++.+||+.||.+|||+.||++.
T Consensus 217 --------~~~i~~~~~----------~~p~~---------~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 217 --------FKKVNSCVY----------VMPDF---------LSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp --------BCCCCSSCC----------CCCTT---------SCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred --------HHHHHcCCC----------CCccc---------CCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 000000000 00000 11246789999999999999999998753
No 144
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.1e-38 Score=348.62 Aligned_cols=250 Identities=22% Similarity=0.271 Sum_probs=177.3
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCceEEEEEee
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDFKALVYEF 243 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~~~LV~Ey 243 (873)
.+.||+|+||.||+|.+..+++.||||++... ....+.+|+.+++++. ||||+++++++ ......++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~-----~~~~~~~lv~e~ 87 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVF-----HDQLHTFLVMEL 87 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSSEEEEEECC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEE-----EcCCEEEEEEEc
Confidence 37899999999999999999999999998632 3467889999999997 99999999996 456788999999
Q ss_pred cCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC---CeEEeccc
Q 002857 244 MPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM---TACVADFG 320 (873)
Q Consensus 244 ~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~---~vKLsDFG 320 (873)
+++|+|.+++.. ...+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++ .+||+|||
T Consensus 88 ~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 154 (325)
T 3kn6_A 88 LNGGELFERIKK----------KKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFG 154 (325)
T ss_dssp CCSCBHHHHHHH----------CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred cCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccc
Confidence 999999999942 356899999999999999999999 89999999999999997665 89999999
Q ss_pred cccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHH
Q 002857 321 IARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVE 400 (873)
Q Consensus 321 la~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~ 400 (873)
+++....... ......||..|+|||++.+..++.++||||||+++|||++|+.||........ .....
T Consensus 155 ~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----------~~~~~ 222 (325)
T 3kn6_A 155 FARLKPPDNQ--PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT----------CTSAV 222 (325)
T ss_dssp TCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----------------CCCHH
T ss_pred cceecCCCCC--cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc----------cccHH
Confidence 9986543322 22234589999999999999999999999999999999999999976322100 00111
Q ss_pred HHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 401 EIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 401 elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
+++.......+. .. ..........+.+++.+||+.||++|||+.||+
T Consensus 223 ~~~~~i~~~~~~------------~~---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 223 EIMKKIKKGDFS------------FE---GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR 269 (325)
T ss_dssp HHHHHHTTTCCC------------CC---SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred HHHHHHHcCCCC------------CC---cccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence 111111111100 00 000111234578999999999999999999874
No 145
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=359.08 Aligned_cols=287 Identities=21% Similarity=0.250 Sum_probs=209.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|.+.++||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ......
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc---CCCCee
Confidence 357899999999999999999999889999999997433 2345678899999999999999999998642 234478
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee----CCCCC
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL----NDEMT 313 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL----d~~~~ 313 (873)
++||||+++|+|.+++... .....+++..++.|+.||+.||+||| +.+|+||||||+|||+ +.++.
T Consensus 85 ~lv~e~~~~g~L~~~l~~~-------~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~ 154 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEP-------SNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSV 154 (396)
T ss_dssp EEEECCCTTEEHHHHTTSG-------GGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEE
T ss_pred EEEEecCCCCCHHHHHHhh-------hcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCcee
Confidence 9999999999999999531 12334899999999999999999999 8999999999999999 77888
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCC--------CCCCcchhhHhHHHHHHHHHhCCCCCCcccccch
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG--------HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNL 385 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--------~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~ 385 (873)
+||+|||+++....... .....||..|+|||++.+ ..++.++||||||+++|||+||+.||........
T Consensus 155 ~kL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 231 (396)
T 4eut_A 155 YKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231 (396)
T ss_dssp EEECCGGGCEECCCGGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT
T ss_pred EEEecCCCceEccCCCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc
Confidence 99999999987644322 223468999999998764 4678899999999999999999999965322111
Q ss_pred --h-hHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 386 --N-LQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 386 --~-l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
. +...........+..+ .........+ ....+... .........+.+++.+||+.||++||++.|++
T Consensus 232 ~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~------~~~~~~~~---~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l 301 (396)
T 4eut_A 232 NKEVMYKIITGKPSGAISGV-QKAENGPIDW------SGDMPVSC---SLSRGLQVLLTPVLANILEADQEKCWGFDQFF 301 (396)
T ss_dssp CHHHHHHHHHSCCTTCCEEE-ECSTTCCEEE------ESSCCTTC---SSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHH
T ss_pred hHHHHHHHhcCCCcccchhh-eeccCCCccc------CccCCccc---ccchHHHhhchHHHHHhhccChhhhccHHHHH
Confidence 1 1111110000000000 0000000000 00000000 11123345688999999999999999999999
Q ss_pred HHHHHHHHh
Q 002857 463 LGLRLIKKK 471 (873)
Q Consensus 463 ~~Le~i~~~ 471 (873)
+.|+.+...
T Consensus 302 ~~l~~il~~ 310 (396)
T 4eut_A 302 AETSDILHR 310 (396)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhhc
Confidence 999887654
No 146
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.8e-38 Score=335.25 Aligned_cols=257 Identities=23% Similarity=0.293 Sum_probs=201.3
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc------chhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD------ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~------~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
++|.+.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|++++++++||||+++++++ ..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~ 79 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF-----EN 79 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EC
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhee-----cC
Confidence 5689999999999999999999888999999998743221 346799999999999999999999996 44
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC-
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM- 312 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~- 312 (873)
....++||||+++++|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+||+++.++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~ 146 (283)
T 3bhy_A 80 KTDVVLILELVSGGELFDFLAE----------KESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNV 146 (283)
T ss_dssp SSEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSS
T ss_pred CCeEEEEEeecCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCC
Confidence 6678999999999999999842 346899999999999999999999 88999999999999998877
Q ss_pred ---CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHH
Q 002857 313 ---TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 313 ---~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~ 389 (873)
.+||+|||++........ .....++..|+|||++.+..++.++||||||+++|||++|+.||....... ..
T Consensus 147 ~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~- 220 (283)
T 3bhy_A 147 PNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE--TL- 220 (283)
T ss_dssp SSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HH-
T ss_pred CCCceEEEecccceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH--HH-
Confidence 899999999986543221 223458999999999999999999999999999999999999997532111 00
Q ss_pred HHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH--HHHH
Q 002857 390 WVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL--GLRL 467 (873)
Q Consensus 390 ~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~--~Le~ 467 (873)
..+........ ..........+.+++.+||+.||++|||+.|+++ .++.
T Consensus 221 ----------~~~~~~~~~~~-------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 271 (283)
T 3bhy_A 221 ----------TNISAVNYDFD-------------------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA 271 (283)
T ss_dssp ----------HHHHTTCCCCC-------------------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred ----------HHhHhcccCCc-------------------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence 00000000000 0000111235788999999999999999999987 4555
Q ss_pred HH
Q 002857 468 IK 469 (873)
Q Consensus 468 i~ 469 (873)
++
T Consensus 272 ~~ 273 (283)
T 3bhy_A 272 IR 273 (283)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 147
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.2e-38 Score=352.85 Aligned_cols=245 Identities=20% Similarity=0.275 Sum_probs=199.6
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+.+|+.+|++++||||+++++++ .....
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 115 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSN 115 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EcCCE
Confidence 5789999999999999999999989999999998643 223456788999999999999999999985 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++|+|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 116 ~~lv~e~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL 182 (350)
T 1rdq_E 116 LYMVMEYVAGGEMFSHLRR----------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182 (350)
T ss_dssp EEEEEECCTTCBHHHHHHH----------HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEcCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEE
Confidence 9999999999999999953 245899999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 183 ~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~--------- 246 (350)
T 1rdq_E 183 TDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--I--------- 246 (350)
T ss_dssp CCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H---------
T ss_pred cccccceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH--H---------
Confidence 999999865332 223569999999999999999999999999999999999999996531110 0
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCC-----HHHHHH
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMK-----INDVEL 463 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPT-----m~EVl~ 463 (873)
...+....+ ..|. .....+.+++.+||+.||++||+ +.||++
T Consensus 247 --~~~i~~~~~--------------~~p~---------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 247 --YEKIVSGKV--------------RFPS---------HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --HHHHHHCCC--------------CCCT---------TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --HHHHHcCCC--------------CCCC---------CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 011111000 0010 01224778999999999999998 777653
No 148
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.3e-38 Score=363.32 Aligned_cols=211 Identities=24% Similarity=0.275 Sum_probs=182.0
Q ss_pred CHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeee
Q 002857 151 SYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACS 227 (873)
Q Consensus 151 s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~ 227 (873)
.+.++...+++|++.++||+|+||.||+|++..+++.||||+++.. .......+.+|+.++..++||||++++++|
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~- 143 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF- 143 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE-
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-
Confidence 3455666788999999999999999999999999999999999742 222334589999999999999999999996
Q ss_pred cccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCee
Q 002857 228 RVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNIL 307 (873)
Q Consensus 228 ~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNIL 307 (873)
...+..+|||||+++|+|.++|.. ....+++..+..++.||+.||+||| +.+|+||||||+|||
T Consensus 144 ----~~~~~~~lV~Ey~~gg~L~~~l~~---------~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NIL 207 (437)
T 4aw2_A 144 ----QDDNNLYLVMDYYVGGDLLTLLSK---------FEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNIL 207 (437)
T ss_dssp ----ECSSEEEEEECCCTTCBHHHHHHT---------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEE
T ss_pred ----eeCCEEEEEEecCCCCcHHHHHHH---------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHee
Confidence 456789999999999999999952 2456999999999999999999999 899999999999999
Q ss_pred eCCCCCeEEeccccccccccccccccccccccccccCCCcccC-----CCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 308 LNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM-----GHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 308 Ld~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
++.++++||+|||+++....... .......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 208 l~~~g~vkL~DFGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 283 (437)
T 4aw2_A 208 MDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283 (437)
T ss_dssp ECTTSCEEECCCTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EcCCCCEEEcchhhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999986543322 2223356999999999987 56789999999999999999999999975
No 149
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.5e-38 Score=361.95 Aligned_cols=260 Identities=20% Similarity=0.237 Sum_probs=204.5
Q ss_pred HHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeec
Q 002857 152 YEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSR 228 (873)
Q Consensus 152 ~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~ 228 (873)
+.++....++|++.++||+|+||.||+|++..+++.||+|+++.. .......+.+|+.+++.++||||+++++++
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-- 138 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-- 138 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE--
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--
Confidence 345556678999999999999999999999999999999998642 223345688999999999999999999995
Q ss_pred ccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 229 VDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 229 ~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
......+|||||+++|+|.++++. ..+++..+..++.||+.||+||| +.+|+||||||+|||+
T Consensus 139 ---~~~~~~~lV~E~~~gg~L~~~l~~-----------~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl 201 (410)
T 3v8s_A 139 ---QDDRYLYMVMEYMPGGDLVNLMSN-----------YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLL 201 (410)
T ss_dssp ---ECSSEEEEEECCCTTEEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred ---EECCEEEEEEeCCCCCcHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeE
Confidence 456789999999999999999842 24888999999999999999999 8999999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCCCC----CCcchhhHhHHHHHHHHHhCCCCCCcccccc
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE----TSSYGDVYSFGILLLEMFTGLRPSDDMFKDN 384 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~----~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~ 384 (873)
+.++++||+|||+++....... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......
T Consensus 202 ~~~g~ikL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~ 280 (410)
T 3v8s_A 202 DKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG 280 (410)
T ss_dssp CTTSCEEECCCTTCEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred CCCCCEEEeccceeEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh
Confidence 9999999999999986643321 1223456999999999987665 7899999999999999999999997532110
Q ss_pred hhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCC--CCCHHHHH
Q 002857 385 LNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGE--RMKINDVE 462 (873)
Q Consensus 385 ~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~e--RPTm~EVl 462 (873)
....++..... ...|.... ....+.+|+.+||+.+|++ ||++.||+
T Consensus 281 -------------~~~~i~~~~~~------------~~~p~~~~-------~s~~~~~li~~lL~~~~~rlgR~~~~ei~ 328 (410)
T 3v8s_A 281 -------------TYSKIMNHKNS------------LTFPDDND-------ISKEAKNLICAFLTDREVRLGRNGVEEIK 328 (410)
T ss_dssp -------------HHHHHHTHHHH------------CCCCTTCC-------CCHHHHHHHHHHSSCGGGCTTSSCHHHHH
T ss_pred -------------HHHHHHhcccc------------ccCCCccc-------ccHHHHHHHHHHccChhhhCCCCCHHHHh
Confidence 01111110000 00011000 1224778999999999988 99999886
Q ss_pred H
Q 002857 463 L 463 (873)
Q Consensus 463 ~ 463 (873)
+
T Consensus 329 ~ 329 (410)
T 3v8s_A 329 R 329 (410)
T ss_dssp T
T ss_pred c
Confidence 5
No 150
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.3e-38 Score=337.75 Aligned_cols=254 Identities=22% Similarity=0.271 Sum_probs=195.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|.+.+.||+|+||.||+|.+..++..||+|++.... ....+.+.+|++++++++||||+++++++ ......
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 95 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF-----EDYHNM 95 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhe-----ecCCeE
Confidence 357889999999999999999999999999999987543 33457899999999999999999999996 456678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee---CCCCCe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL---NDEMTA 314 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL---d~~~~v 314 (873)
++||||+++|+|.+++.... .....+++..++.|+.||+.||+||| +.+|+||||||+|||+ +.++.+
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~ 166 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQ------ARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPI 166 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHH------HHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCcHHHHHHhhh------hcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCE
Confidence 99999999999999985311 12456899999999999999999999 8999999999999999 456789
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
||+|||+++...... ......||..|+|||++. ..++.++||||||+++|||++|+.||........
T Consensus 167 kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--------- 233 (285)
T 3is5_A 167 KIIDFGLAELFKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--------- 233 (285)
T ss_dssp EECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---------
T ss_pred EEEeeecceecCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH---------
Confidence 999999998654332 123346899999999875 5689999999999999999999999976321110
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
........ ......... ....+.+++.+||+.||++|||+.||++
T Consensus 234 --------~~~~~~~~------------~~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 234 --------QQKATYKE------------PNYAVECRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --------HHHHHHCC------------CCCCC--CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred --------HhhhccCC------------cccccccCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000 000000000 1224778999999999999999999874
No 151
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.9e-38 Score=338.89 Aligned_cols=255 Identities=24% Similarity=0.349 Sum_probs=196.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|++.+.||+|+||.||+|.+ .++.||||+++.. ...+.+.+|++++++++||||+++++++. ...+..+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEEC----CC--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEE----cCCCceE
Confidence 46789999999999999999987 4789999998743 24578999999999999999999999863 3344689
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||+++|+|.+++.. .....+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 92 lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~D 160 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRS--------RGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSD 160 (278)
T ss_dssp EEECCCTTEEHHHHHHH--------HHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCCHHHHHHh--------cccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEee
Confidence 99999999999999953 11223788899999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCch
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
||+++...... ....++..|+|||++.+..++.++||||||+++|||+| |+.||....... ...
T Consensus 161 fg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~-------- 225 (278)
T 1byg_A 161 FGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVP-------- 225 (278)
T ss_dssp CCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHH--------
T ss_pred ccccccccccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH--------
Confidence 99998553321 12347889999999988899999999999999999998 999997532111 000
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
.+... ... +.. ..+...+.+++.+||+.||++|||+.||++.|+.++...
T Consensus 226 ---~~~~~-~~~--------------~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 226 ---RVEKG-YKM--------------DAP-------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp ---HHTTT-CCC--------------CCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---HHhcC-CCC--------------CCc-------ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 00000 000 000 011235788999999999999999999999999987643
No 152
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.1e-37 Score=356.42 Aligned_cols=206 Identities=24% Similarity=0.307 Sum_probs=170.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|.+.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+++|++++|+||+++++++....+.....
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 5689999999999999999999999999999999974322 23467899999999999999999999975443333467
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+. |+|.+++. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 105 ~~lv~e~~~-~~L~~~~~----------~~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL 170 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFK----------TPIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKV 170 (432)
T ss_dssp EEEEEECCS-EEHHHHHH----------SSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEecCC-cCHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEE
Confidence 999999986 59999984 3456899999999999999999999 889999999999999999999999
Q ss_pred ecccccccccccccc--------------------ccccccccccccCCCccc-CCCCCCcchhhHhHHHHHHHHHhCCC
Q 002857 317 ADFGIARFLEATNEQ--------------------TSSIGVKGTTGYIAPEYG-MGHETSSYGDVYSFGILLLEMFTGLR 375 (873)
Q Consensus 317 sDFGla~~~~~~~~~--------------------~~~~~~~Gt~~Y~APE~l-~~~~~s~ksDVwSfGvvL~ELlTGk~ 375 (873)
+|||+++........ .......||..|+|||++ ....++.++|||||||++|||++|..
T Consensus 171 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~ 250 (432)
T 3n9x_A 171 CDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250 (432)
T ss_dssp CCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCT
T ss_pred ccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccc
Confidence 999999876443211 112446789999999985 55679999999999999999999766
Q ss_pred CCC
Q 002857 376 PSD 378 (873)
Q Consensus 376 Pf~ 378 (873)
||.
T Consensus 251 p~~ 253 (432)
T 3n9x_A 251 SHI 253 (432)
T ss_dssp TTC
T ss_pred ccc
Confidence 654
No 153
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=9.3e-38 Score=348.06 Aligned_cols=287 Identities=18% Similarity=0.219 Sum_probs=205.9
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
...++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|++++++++||||+++++++.........
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 345689999999999999999999998999999999974332 2336789999999999999999999997654434446
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+. |+|.+++.. ..+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~-----------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~k 168 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKT-----------QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLK 168 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEE
T ss_pred eEEEEEcccC-cCHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEE
Confidence 7899999997 599998842 35899999999999999999999 89999999999999999999999
Q ss_pred Eeccccccccccccccc-cccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 316 VADFGIARFLEATNEQT-SSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
|+|||+++......... ......||..|+|||++.+ ..++.++||||||+++|||++|+.||....... .+.... .
T Consensus 169 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~-~ 246 (364)
T 3qyz_A 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHIL-G 246 (364)
T ss_dssp ECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHH-H
T ss_pred EEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHH-H
Confidence 99999998765432221 1234569999999998654 458999999999999999999999997633221 111111 1
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.......+.+....... .+...... ..+...............+.+|+.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 247 ILGSPSQEDLNCIINLK--ARNYLLSL-PHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHCSCCHHHHHTCCCHH--HHHHHHTS-CCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCCHHHHHHhhhhh--HHHHHHhc-CCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11100001010000000 00000000 000000011111112345789999999999999999999864
No 154
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.7e-38 Score=354.53 Aligned_cols=259 Identities=20% Similarity=0.247 Sum_probs=192.6
Q ss_pred hcCCCcc-eeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSE-NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~-~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|.+. ++||+|+||.||+|.+..+++.||||+++. ...+.+|++++.++ +||||+++++++... +.+...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence 3466665 789999999999999999999999999862 25678899988555 899999999986432 233567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC---CCC
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND---EMT 313 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~---~~~ 313 (873)
.+|||||+++|+|.+++.. .....+++.+++.|+.||+.||.||| +.+|+||||||+|||++. ++.
T Consensus 134 ~~lv~E~~~gg~L~~~l~~--------~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~ 202 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQD--------RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAI 202 (400)
T ss_dssp EEEEEECCCSEEHHHHHHC--------C---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCC
T ss_pred EEEEEEeCCCCcHHHHHHH--------hCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCcc
Confidence 8999999999999999953 22346999999999999999999999 899999999999999997 789
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+||+|||+++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 203 ~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~------- 272 (400)
T 1nxk_A 203 LKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------- 272 (400)
T ss_dssp EEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-------
T ss_pred EEEEecccccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-------
Confidence 9999999998654322 223456899999999999999999999999999999999999999753221100
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
......+....+.. ....+ ..+...+.+|+.+||+.||++|||+.||++.-
T Consensus 273 --~~~~~~i~~~~~~~-----------~~~~~--------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 273 --PGMKTRIRMGQYEF-----------PNPEW--------SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp --CSHHHHHHHTCCCC-----------CTTTT--------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred --HHHHHHHHcCcccC-----------CCccc--------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00000110000000 00000 01123478899999999999999999998753
No 155
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=348.85 Aligned_cols=243 Identities=24% Similarity=0.327 Sum_probs=199.7
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--------cchhHHHHHHHHHHhhhhccceeeeeeeecc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--------DASKSFTVECEVMRNIIHRKIIKVVTACSRV 229 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--------~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~ 229 (873)
..++|.+.+.||+|+||.||+|++..+++.||||+++.... .....+.+|++++++++||||+++++++
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~--- 98 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF--- 98 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE---
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE---
Confidence 35689999999999999999999999999999999975432 1334688899999999999999999996
Q ss_pred cccCCceEEEEEeecCCC-ChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee
Q 002857 230 DYQGNDFKALVYEFMPNG-SLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL 308 (873)
Q Consensus 230 ~~~~~~~~~LV~Ey~~~G-SL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL 308 (873)
...+..++||||+.+| +|.+++. ....+++..++.|+.||+.||+||| +.+|+||||||+|||+
T Consensus 99 --~~~~~~~lv~e~~~~g~~l~~~~~----------~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll 163 (335)
T 3dls_A 99 --ENQGFFQLVMEKHGSGLDLFAFID----------RHPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVI 163 (335)
T ss_dssp --ECSSEEEEEEECCTTSCBHHHHHH----------TCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred --eeCCEEEEEEEeCCCCccHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEE
Confidence 4567889999999777 9999984 3456999999999999999999999 8899999999999999
Q ss_pred CCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccccchhh
Q 002857 309 NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 387 (873)
Q Consensus 309 d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l 387 (873)
+.++.+||+|||+++....... .....||..|+|||++.+..+ +.++||||||+++|||++|+.||......
T Consensus 164 ~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---- 236 (335)
T 3dls_A 164 AEDFTIKLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---- 236 (335)
T ss_dssp CTTSCEEECCCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----
T ss_pred cCCCcEEEeecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----
Confidence 9999999999999987644322 223568999999999988876 88999999999999999999999652110
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
....+ ..|.. ....+.+++.+||+.||++|||+.||++
T Consensus 237 ---------------~~~~~--------------~~~~~---------~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 237 ---------------VEAAI--------------HPPYL---------VSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp ---------------TTTCC--------------CCSSC---------CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---------------Hhhcc--------------CCCcc---------cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 00000 1224778999999999999999999865
No 156
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.2e-38 Score=341.05 Aligned_cols=263 Identities=23% Similarity=0.345 Sum_probs=204.0
Q ss_pred HhhcCCCcce-eecccCceEEEEEEE--cCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 157 SATKGFSSEN-LIGAGNFASVYKGIL--FEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 157 ~at~~f~~~~-~LG~G~fG~VYkg~~--~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
...++|.+.+ .||+|+||.||+|.+ ..+++.||||+++.... ...+.+.+|++++++++||||+++++++
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~----- 87 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC----- 87 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----
Confidence 3446788887 999999999999965 45578999999975432 2346799999999999999999999986
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
..+..++||||+++++|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.+
T Consensus 88 -~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~ 153 (291)
T 1xbb_A 88 -EAESWMLVMEMAELGPLNKYLQQ----------NRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQ 153 (291)
T ss_dssp -ESSSEEEEEECCTTEEHHHHHHH----------CTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEET
T ss_pred -CCCCcEEEEEeCCCCCHHHHHHh----------CcCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCC
Confidence 23457999999999999999943 345889999999999999999999 8899999999999999999
Q ss_pred CCeEEeccccccccccccccc-cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHH
Q 002857 312 MTACVADFGIARFLEATNEQT-SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQN 389 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~ 389 (873)
+.+||+|||+++......... ......++..|+|||++.+..++.++||||||+++|||+| |+.||....... ..
T Consensus 154 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~- 230 (291)
T 1xbb_A 154 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VT- 230 (291)
T ss_dssp TEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HH-
T ss_pred CcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HH-
Confidence 999999999998764432211 1222346788999999988889999999999999999999 999997632111 11
Q ss_pred HHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 390 WVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 390 ~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
..+..... .+.. ..+...+.+++.+||+.||++|||+.||++.|+.+.
T Consensus 231 -----------~~~~~~~~--------------~~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 231 -----------AMLEKGER--------------MGCP-------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp -----------HHHHTTCC--------------CCCC-------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -----------HHHHcCCC--------------CCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11100000 0000 011235788999999999999999999999999987
Q ss_pred Hhhh
Q 002857 470 KKLL 473 (873)
Q Consensus 470 ~~l~ 473 (873)
....
T Consensus 279 ~~~~ 282 (291)
T 1xbb_A 279 YDVV 282 (291)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6554
No 157
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.9e-38 Score=354.81 Aligned_cols=251 Identities=22% Similarity=0.334 Sum_probs=191.6
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhh--hccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNII--HRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~--HpNIV~llg~c~~~~~~~~~ 235 (873)
++|.+.+.||+|+||.||+|.+.. ++.||||++..... ...+.+.+|+++|++++ |+||+++++++ ...+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~-----~~~~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----ITDQ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSS
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEE-----ecCC
Confidence 459999999999999999998754 88999999875432 33467999999999996 59999999986 3456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..+|||| +.+++|.+++.. ...+++.+++.|+.||+.||.||| +.+|+||||||+|||++ ++.+|
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~k 194 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKK----------KKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLK 194 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHH----------CSSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEE
T ss_pred EEEEEEe-cCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEE
Confidence 7999999 568899999953 346888899999999999999999 89999999999999996 57999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCC-----------CCCCcchhhHhHHHHHHHHHhCCCCCCcccccc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-----------HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDN 384 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----------~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~ 384 (873)
|+|||+++.+.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 195 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 274 (390)
T 2zmd_A 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274 (390)
T ss_dssp ECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH
T ss_pred EEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH
Confidence 999999987654333222334569999999999865 368999999999999999999999996532111
Q ss_pred hhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 385 LNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 385 ~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
. .+..+++...... .|... ...+.+|+.+||+.||++|||+.||++.
T Consensus 275 ~------------~~~~~~~~~~~~~------------~~~~~---------~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 275 S------------KLHAIIDPNHEIE------------FPDIP---------EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp H------------HHHHHHCTTSCCC------------CCCCS---------CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H------------HHHHHhCccccCC------------CCccc---------hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1 1112222111100 01000 1247789999999999999999999864
No 158
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.3e-38 Score=348.96 Aligned_cols=200 Identities=25% Similarity=0.309 Sum_probs=174.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+.++.++ +||||+++++++ ....
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~~~ 83 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTES 83 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSS
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE-----EeCC
Confidence 578999999999999999999999999999999975432 2345688899999988 899999999995 4567
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++++|
T Consensus 84 ~~~lv~e~~~gg~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~k 150 (345)
T 3a8x_A 84 RLFFVIEYVNGGDLMFHMQR----------QRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIK 150 (345)
T ss_dssp EEEEEECCCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEE
Confidence 89999999999999999842 245899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
|+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 151 L~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 151 LTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp ECCGGGCBCSCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred EEeccccccccCCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 99999998543221 123345699999999999999999999999999999999999999965
No 159
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9.1e-39 Score=366.48 Aligned_cols=249 Identities=20% Similarity=0.260 Sum_probs=191.4
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|++.++||+|+||.||+|.+..+++.||||+++.. .......+.+|+.++++++||||+++++++ ...+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~-----~~~~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHD 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEE-----EETT
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEE-----eeCC
Confidence 46799999999999999999999999999999999743 333446788899999999999999999996 4456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC-CCeeeccCCCCCeeeCCCCCe
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK-PPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s-~gIvHrDLKpsNILLd~~~~v 314 (873)
..+|||||+++|+|.+++.. ...+++..+..|+.||+.||+||| + .+|+||||||+|||++.++.+
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~ 288 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSR----------ERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHI 288 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHH----------HSCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCE
T ss_pred EEEEEEeeCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCE
Confidence 78999999999999999842 346899999999999999999999 6 899999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 289 kl~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---------- 356 (446)
T 4ejn_A 289 KITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---------- 356 (446)
T ss_dssp EECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------
T ss_pred EEccCCCceeccCCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH----------
Confidence 999999998543222 22234569999999999999999999999999999999999999996532111
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-----CHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-----KINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-----Tm~EVl~ 463 (873)
+......... ..|.. ....+.+++.+||+.||++|| ++.|+++
T Consensus 357 -------~~~~i~~~~~----------~~p~~---------~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 357 -------LFELILMEEI----------RFPRT---------LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -------HHHHHHHCCC----------CCCTT---------SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -------HHHHHHhCCC----------CCCcc---------CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1111110000 00100 122477899999999999999 9998865
No 160
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.7e-38 Score=346.71 Aligned_cols=201 Identities=24% Similarity=0.332 Sum_probs=165.0
Q ss_pred hcCCCcceeecccCceEEEEEEEc---CCCcEEEEEEeeccC----CcchhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILF---EGAPAVAIKVFNFLH----HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~---~~g~~VAVK~l~~~~----~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
.++|++.+.||+|+||.||+|+.. .+++.||||+++... ......+.+|+.+|++++||||+++++++
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----- 90 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF----- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEE-----
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEE-----
Confidence 467999999999999999999885 578999999997432 22345688899999999999999999996
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
...+..++||||+++|+|.+++.. ...+++..++.++.||+.||.||| +.+|+||||||+|||++.+
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~ 157 (327)
T 3a62_A 91 QTGGKLYLILEYLSGGELFMQLER----------EGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQ 157 (327)
T ss_dssp ECSSCEEEEEECCTTEEHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTT
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHh----------CCCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCC
Confidence 456679999999999999999842 345888999999999999999999 8899999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
+.+||+|||+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 158 ~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 158 GHVKLTDFGLCKESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp SCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CcEEEEeCCcccccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 999999999997543222 122335689999999999999999999999999999999999999975
No 161
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.4e-38 Score=334.45 Aligned_cols=250 Identities=24% Similarity=0.371 Sum_probs=180.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++ ...+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDSN 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEE-----ECSS
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEE-----ccCC
Confidence 467999999999999999999998899999999986432 22346789999999999999999999996 4566
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~k 152 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKN---------RVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIK 152 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHT---------CSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCcHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEE
Confidence 78999999999999999852 3356899999999999999999999 88999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||++........ ......||..|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 153 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---------- 220 (278)
T 3cok_A 153 IADFGLATQLKMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---------- 220 (278)
T ss_dssp ECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------
T ss_pred EEeecceeeccCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------
Confidence 999999986543221 12234689999999999998999999999999999999999999975321110
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+..+ ..... ..|. .....+.+++.+||+.||++|||+.||++
T Consensus 221 ---~~~~----~~~~~----------~~~~---------~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 221 ---LNKV----VLADY----------EMPS---------FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ------C----CSSCC----------CCCT---------TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---HHHH----hhccc----------CCcc---------ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0000 00000 0000 01224778999999999999999998864
No 162
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.7e-38 Score=340.65 Aligned_cols=259 Identities=19% Similarity=0.212 Sum_probs=195.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc---chhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD---ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~---~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|.+.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|+.++++++||||+++++++ ...+
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~ 107 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG-----EIDG 107 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETT
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE-----eeCC
Confidence 46899999999999999999999889999999998744322 236789999999999999999999996 3456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++.. ...+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~k 174 (309)
T 2h34_A 108 QLYVDMRLINGVDLAAMLRR----------QGPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAY 174 (309)
T ss_dssp EEEEEEECCCCEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEE
T ss_pred eEEEEEEecCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEE
Confidence 78999999999999999953 245899999999999999999999 88999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||++........ .......|+..|+|||++.+..++.++||||||+++|||++|+.||...... .+..
T Consensus 175 l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~------ 245 (309)
T 2h34_A 175 LVDFGIASATTDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGA------ 245 (309)
T ss_dssp ECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHH------
T ss_pred EecCccCcccccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHH------
Confidence 999999986543321 1222346899999999999999999999999999999999999999753211 0000
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-CHHHHHHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-KINDVELGLRLIK 469 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-Tm~EVl~~Le~i~ 469 (873)
.+....... . .........+.+++.+||+.||++|| ++.++++.|+.+.
T Consensus 246 ------~~~~~~~~~-~------------------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 246 ------HINQAIPRP-S------------------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp ------HHHSCCCCG-G------------------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred ------HhccCCCCc-c------------------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 010000000 0 00001122477899999999999999 9999999998753
No 163
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-38 Score=336.31 Aligned_cols=262 Identities=22% Similarity=0.326 Sum_probs=206.0
Q ss_pred cCCCcce-eecccCceEEEEEEEc--CCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 160 KGFSSEN-LIGAGNFASVYKGILF--EGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~-~LG~G~fG~VYkg~~~--~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|.+.+ .||+|+||.||+|.+. .++..||||+++.... ...+.+.+|++++++++||||+++++++. .+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------AE 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------SS
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------CC
Confidence 4566666 9999999999999864 4677899999975432 34567999999999999999999999962 34
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++.. ....+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~k 150 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVG---------KREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAK 150 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTT---------CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEE
T ss_pred CcEEEEEeCCCCCHHHHHHh---------CCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEE
Confidence 58999999999999999842 3456899999999999999999999 88999999999999999999999
Q ss_pred Eecccccccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhh
Q 002857 316 VADFGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 316 LsDFGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~ 393 (873)
|+|||+++........ .......+|..|+|||++.+..++.++||||||+++|||+| |+.||....... ....+
T Consensus 151 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~i-- 226 (287)
T 1u59_A 151 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFI-- 226 (287)
T ss_dssp ECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHH--
T ss_pred ECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHH--
Confidence 9999999876433221 11222346889999999988889999999999999999999 999997532111 11111
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhh
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLL 473 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~ 473 (873)
..... .+... .+...+.+++..||+.+|++||++.||++.|+.+.....
T Consensus 227 ----------~~~~~--------------~~~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 227 ----------EQGKR--------------MECPP-------ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp ----------HTTCC--------------CCCCT-------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ----------hcCCc--------------CCCCC-------CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 00000 00000 112357889999999999999999999999999877665
Q ss_pred c
Q 002857 474 E 474 (873)
Q Consensus 474 ~ 474 (873)
.
T Consensus 276 ~ 276 (287)
T 1u59_A 276 S 276 (287)
T ss_dssp T
T ss_pred C
Confidence 3
No 164
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.6e-38 Score=337.22 Aligned_cols=259 Identities=20% Similarity=0.278 Sum_probs=201.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++.. .....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---GGGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCCce
Confidence 4689999999999999999999998999999999975432 334678999999999999999999998642 33567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCC-----eeeccCCCCCeeeCCC
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPP-----IAHCDIKPSNILLNDE 311 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~g-----IvHrDLKpsNILLd~~ 311 (873)
.++||||+++|+|.+++... ......+++..++.|+.||+.||+||| +.+ |+||||||+|||++.+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~ 152 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKG------TKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGK 152 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSS
T ss_pred EEEEEeCCCCCCHHHHHHhh------cccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCC
Confidence 89999999999999999531 123455899999999999999999999 667 9999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHH
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWV 391 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~ 391 (873)
+.+||+|||+++....... ......|+..|+|||++.+..++.++||||||+++|||+||+.||....... +..
T Consensus 153 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~-- 226 (279)
T 2w5a_A 153 QNVKLGDFGLARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LAG-- 226 (279)
T ss_dssp SCEEECCCCHHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH--
T ss_pred CCEEEecCchheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH--HHH--
Confidence 9999999999986543221 1223468999999999999899999999999999999999999997632110 000
Q ss_pred hhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 392 QSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 392 ~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
.+...... ..+. .....+.+++.+||+.||++|||+.||++.+.
T Consensus 227 ---------~i~~~~~~-------------~~~~---------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 227 ---------KIREGKFR-------------RIPY---------RYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp ---------HHHHTCCC-------------CCCT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ---------HHhhcccc-------------cCCc---------ccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 01000000 0000 01234788999999999999999999987553
No 165
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.5e-38 Score=351.92 Aligned_cols=201 Identities=24% Similarity=0.293 Sum_probs=175.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+..|..++..+ +||||+++++++ ...
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~~ 93 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTM 93 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE-----ECS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE-----EcC
Confidence 46899999999999999999999888999999999743 233456788999999988 899999999985 556
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..++||||+++|+|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++++
T Consensus 94 ~~~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~v 160 (353)
T 2i0e_A 94 DRLYFVMEYVNGGDLMYHIQQ----------VGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHI 160 (353)
T ss_dssp SEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcE
Confidence 789999999999999999842 245899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 161 kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 223 (353)
T 2i0e_A 161 KIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223 (353)
T ss_dssp EECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEeCCcccccccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence 999999998543221 123345699999999999999999999999999999999999999975
No 166
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.5e-37 Score=336.71 Aligned_cols=251 Identities=23% Similarity=0.305 Sum_probs=198.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|.+.+.||+|+||.||+|++..+++.||||+++.........+.+|++++++++||||+++++++ ......+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 82 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY-----ESTTHYY 82 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhc-----ccCCEEE
Confidence 46789999999999999999999889999999999865544556789999999999999999999985 4566789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee---CCCCCeE
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL---NDEMTAC 315 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL---d~~~~vK 315 (873)
+||||+++++|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+|
T Consensus 83 lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~k 149 (304)
T 2jam_A 83 LVMQLVSGGELFDRILE----------RGVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIM 149 (304)
T ss_dssp EEECCCCSCBHHHHHHH----------HSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEE
T ss_pred EEEEcCCCccHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEE
Confidence 99999999999999842 245889999999999999999999 8899999999999999 7889999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||+++..... ......||..|+|||++.+..++.++||||||+++|||++|+.||....... +.
T Consensus 150 l~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~------- 216 (304)
T 2jam_A 150 ITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK--LF------- 216 (304)
T ss_dssp BCSCSTTCCCCCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HH-------
T ss_pred EccCCcceecCCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HH-------
Confidence 9999999754322 1223458999999999999999999999999999999999999996532110 00
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+........ .+.. ......+.+++.+||+.||++|||+.|+++
T Consensus 217 ----~~i~~~~~~~~------------~~~~-------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 217 ----EKIKEGYYEFE------------SPFW-------DDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ----HHHHHCCCCCC------------TTTT-------TTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ----HHHHcCCCCCC------------cccc-------ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111000000 0000 011234788999999999999999999875
No 167
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=334.64 Aligned_cols=253 Identities=23% Similarity=0.332 Sum_probs=194.8
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV 240 (873)
+|....+||+|+||.||+|.+..+++.||||++........+.+.+|+.++++++||||+++++++ ...+..++|
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv 97 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF-----SENGFIKIF 97 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEE-----EeCCcEEEE
Confidence 445566999999999999999999999999999866655667899999999999999999999996 345678999
Q ss_pred EeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-CCCeEEecc
Q 002857 241 YEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND-EMTACVADF 319 (873)
Q Consensus 241 ~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~-~~~vKLsDF 319 (873)
|||+++++|.+++.. ......+++..+..++.||+.||+||| +.+|+|+||||+|||++. ++.+||+||
T Consensus 98 ~e~~~~~~L~~~l~~-------~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Df 167 (295)
T 2clq_A 98 MEQVPGGSLSALLRS-------KWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDF 167 (295)
T ss_dssp EECCSEEEHHHHHHH-------TTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCT
T ss_pred EEeCCCCCHHHHHHh-------hccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeec
Confidence 999999999999853 112345678889999999999999999 889999999999999987 899999999
Q ss_pred ccccccccccccccccccccccccCCCcccCCCC--CCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 320 GIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE--TSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 320 Gla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
|+++....... ......||..|+|||++.+.. ++.++||||||+++|||++|+.||............
T Consensus 168 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-------- 237 (295)
T 2clq_A 168 GTSKRLAGINP--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-------- 237 (295)
T ss_dssp TTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH--------
T ss_pred ccccccCCCCC--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh--------
Confidence 99986543221 122346899999999987643 789999999999999999999999642211100000
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. .. ....+.... .....+.+++.+||+.||++|||+.|+++
T Consensus 238 ----~---~~------------~~~~~~~~~------~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 238 ----V---GM------------FKVHPEIPE------SMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----H---HH------------HCCCCCCCT------TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----h---cc------------ccccccccc------cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 00 000000000 01234778999999999999999999864
No 168
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=7e-38 Score=343.08 Aligned_cols=267 Identities=25% Similarity=0.393 Sum_probs=203.3
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEE--EEEEeecc-CCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCc
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAV--AIKVFNFL-HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~V--AVK~l~~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~ 235 (873)
++|.+.+.||+|+||.||+|++..++..+ |||+++.. .....+.+.+|+++++++ +||||+++++++ ...+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRG 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE-----EETT
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceee-----eeCC
Confidence 57889999999999999999998888755 99988743 233456799999999999 999999999996 4456
Q ss_pred eEEEEEeecCCCChhhhcccccccc------cccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEED------KRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~------~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
..++||||+++|+|.+++....... ........+++.+++.|+.||+.||+||| +.+|+||||||+|||++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEc
Confidence 7999999999999999995411000 00012357899999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhH
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~ 388 (873)
.++.+||+|||+++...... ......++..|+|||++.+..++.++||||||+++|||+| |+.||....... +.
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~ 251 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LY 251 (327)
T ss_dssp GGGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HH
T ss_pred CCCeEEEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH--HH
Confidence 99999999999997432211 1222346889999999988889999999999999999998 999996532111 00
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
. .+... ... ..+. .+...+.+++.+||+.+|++|||+.|+++.|+.+
T Consensus 252 ~-----------~~~~~-~~~------------~~~~---------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 252 E-----------KLPQG-YRL------------EKPL---------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp H-----------HGGGT-CCC------------CCCT---------TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred H-----------HhhcC-CCC------------CCCC---------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0 00000 000 0000 0123478899999999999999999999999998
Q ss_pred HHhh
Q 002857 469 KKKL 472 (873)
Q Consensus 469 ~~~l 472 (873)
....
T Consensus 299 ~~~~ 302 (327)
T 1fvr_A 299 LEER 302 (327)
T ss_dssp HHSS
T ss_pred HHhh
Confidence 6643
No 169
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.7e-38 Score=344.41 Aligned_cols=203 Identities=21% Similarity=0.323 Sum_probs=164.4
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
...++|.+.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|++++++++||||+++++++ ..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 105 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI-----HHN 105 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEE-----EET
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEE-----ecC
Confidence 3456899999999999999999999999999999999744322 245678999999999999999999996 446
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee-----C
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL-----N 309 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL-----d 309 (873)
...+|||||++ |+|.+++.. ...+++..++.|+.||+.||+||| +.+|+||||||+|||+ +
T Consensus 106 ~~~~lv~e~~~-~~L~~~~~~----------~~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~ 171 (329)
T 3gbz_A 106 HRLHLIFEYAE-NDLKKYMDK----------NPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDAS 171 (329)
T ss_dssp TEEEEEEECCS-EEHHHHHHH----------CTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC----
T ss_pred CEEEEEEecCC-CCHHHHHhh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCC
Confidence 67999999997 599999842 345899999999999999999999 8899999999999999 4
Q ss_pred CCCCeEEeccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 310 DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 310 ~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
.++.+||+|||+++...... .......+|..|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 172 ~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 172 ETPVLKIGDFGLARAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp -CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccceEEECcCCCccccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 55569999999998764322 122334589999999998875 4899999999999999999999999763
No 170
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=346.76 Aligned_cols=273 Identities=20% Similarity=0.261 Sum_probs=193.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-chhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
++|.+.+.||+|+||.||+|++..+++.||||+++..... ....+.+|++++++++||||+++++++ ......+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEE-----ECSSCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEE-----eeCCEEE
Confidence 5789999999999999999999889999999998743322 223566799999999999999999996 4466789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEec
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVAD 318 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsD 318 (873)
+||||++ |+|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 77 lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~D 143 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDD---------CGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLAD 143 (324)
T ss_dssp EEEECCS-EEHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECS
T ss_pred EEecccc-cCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEcc
Confidence 9999997 599998853 3456899999999999999999999 89999999999999999999999999
Q ss_pred cccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC--
Q 002857 319 FGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL-- 395 (873)
Q Consensus 319 FGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~-- 395 (873)
||+++...... .......||..|+|||++.+ ..++.++||||||+++|||++|+.||....... ....+....
T Consensus 144 fg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~ 219 (324)
T 3mtl_A 144 FGLARAKSIPT--KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE--QLHFIFRILGT 219 (324)
T ss_dssp SSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCC
T ss_pred CcccccccCCc--cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCC
Confidence 99998654322 12223468999999999876 568999999999999999999999997643221 111111100
Q ss_pred --chhHHHHhhhhhhhhhhHHHHHhhhccCCC-CchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 --PERVEEIVDTLFFKEIEEEETVYKYKKAPS-SSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 --~~~l~elid~~L~~~~~~r~~~~~i~~~p~-~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...+..+.... .......... ..............+.+|+.+||+.||++|||+.|+++
T Consensus 220 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 220 PTEETWPGILSNE---------EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCTTTSTTGGGCH---------HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CChHhchhhhcch---------hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00111110000 0000000000 00000001112335789999999999999999999875
No 171
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.7e-37 Score=357.54 Aligned_cols=268 Identities=21% Similarity=0.289 Sum_probs=208.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
.++|.+.++||+|+||.||+|++..+++.||||++..... ...+..|+++++.++|.+++..+.++. ......+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~----~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFG----VEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEE----EETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEE----eeCCEEE
Confidence 4689999999999999999999988999999999874432 356899999999998866555554442 3466789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee---CCCCCeE
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL---NDEMTAC 315 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL---d~~~~vK 315 (873)
|||||+ +++|.+++.. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||| +.++.+|
T Consensus 80 lvme~~-g~sL~~ll~~---------~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vk 146 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNF---------CSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVY 146 (483)
T ss_dssp EEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEE
T ss_pred EEEECC-CCCHHHHHHh---------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEE
Confidence 999999 9999999952 2456999999999999999999999 8999999999999999 6889999
Q ss_pred Eecccccccccccccc-----ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002857 316 VADFGIARFLEATNEQ-----TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 316 LsDFGla~~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~ 390 (873)
|+|||+++.+...... .......||..|+|||++.+..++.++|||||||+||||++|+.||........ ..
T Consensus 147 L~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~- 223 (483)
T 3sv0_A 147 IIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQ- 223 (483)
T ss_dssp ECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HH-
T ss_pred EEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HH-
Confidence 9999999876543321 112245699999999999999999999999999999999999999976432211 00
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKK 470 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~ 470 (873)
.+..+....+..... .....+..++.+|+..||+.+|++||++.+|+++|+.+..
T Consensus 224 -------~~~~i~~~~~~~~~~------------------~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 224 -------KYEKISEKKVATSIE------------------ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp -------HHHHHHHHHHHSCHH------------------HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred -------HHHHHhhccccccHH------------------HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 011111111100000 0001123458899999999999999999999999999877
Q ss_pred hhh
Q 002857 471 KLL 473 (873)
Q Consensus 471 ~l~ 473 (873)
...
T Consensus 279 ~~~ 281 (483)
T 3sv0_A 279 REG 281 (483)
T ss_dssp HTT
T ss_pred HcC
Confidence 554
No 172
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=336.76 Aligned_cols=255 Identities=21% Similarity=0.339 Sum_probs=198.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC----CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH----HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~----~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|.+.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|++++++++|+||+++++++.. ...
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EEK 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C--
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CCC
Confidence 468999999999999999999998899999999987432 2345779999999999999999999998632 345
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||++++ |.+++.. .....+++..++.|+.||+.||.||| +.+|+||||||+|||++.++.+
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~--------~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~ 148 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDS--------VPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTL 148 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHH--------STTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCE
T ss_pred CeEEEEehhccCC-HHHHHHh--------CcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcE
Confidence 5789999999876 7777643 23456899999999999999999999 8899999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCC--CCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE--TSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
||+|||++................||..|+|||++.+.. ++.++||||||+++|||++|+.||....... .
T Consensus 149 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~----- 221 (305)
T 2wtk_C 149 KISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK--L----- 221 (305)
T ss_dssp EECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--H-----
T ss_pred EeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH--H-----
Confidence 999999998765433333333456899999999987654 4789999999999999999999997521110 0
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
...+..... ..+. .+...+.+++.+||+.||++|||+.|+++.
T Consensus 222 ------~~~i~~~~~--------------~~~~---------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 222 ------FENIGKGSY--------------AIPG---------DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ------HHHHHHCCC--------------CCCS---------SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ------HHHHhcCCC--------------CCCC---------ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000000000 0000 012347789999999999999999999864
No 173
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.7e-38 Score=372.65 Aligned_cols=259 Identities=22% Similarity=0.326 Sum_probs=200.5
Q ss_pred CCcce-eecccCceEEEEEEEcC--CCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 162 FSSEN-LIGAGNFASVYKGILFE--GAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 162 f~~~~-~LG~G~fG~VYkg~~~~--~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
+.+.+ .||+|+||.||+|.+.. ++..||||+++... ....+.|.+|+++|++++|||||+++++|.. +..
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~ 410 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EAL 410 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCe
Confidence 33344 79999999999998753 45679999997543 3345789999999999999999999999732 358
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
+|||||+++|+|.++|.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 411 ~lv~E~~~~g~L~~~l~~---------~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~ 478 (613)
T 2ozo_A 411 MLVMEMAGGGPLHKFLVG---------KREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKIS 478 (613)
T ss_dssp EEEEECCTTCBHHHHHTT---------CTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred EEEEEeCCCCcHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEe
Confidence 999999999999999953 3456899999999999999999999 8999999999999999999999999
Q ss_pred cccccccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcC
Q 002857 318 DFGIARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 318 DFGla~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|||+++.+...... .......+++.|+|||++.+..++.++|||||||++|||+| |+.||....... ...
T Consensus 479 DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~------ 550 (613)
T 2ozo_A 479 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMA------ 550 (613)
T ss_dssp CCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHH------
T ss_pred eccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHH------
Confidence 99999876433221 11122335689999999998999999999999999999998 999997632211 111
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhhh
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKLL 473 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l~ 473 (873)
.+...... ..| ..+...+.+|+..||+.+|++||++.+|++.|+.+...+.
T Consensus 551 ------~i~~~~~~------------~~p---------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 551 ------FIEQGKRM------------ECP---------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp ------HHHTTCCC------------CCC---------TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred ------HHHcCCCC------------CCC---------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 11100000 000 0123458899999999999999999999999999876654
No 174
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.3e-38 Score=350.32 Aligned_cols=200 Identities=27% Similarity=0.349 Sum_probs=173.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++ ..++..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF-----YSDGEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEE-----EETTEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEE-----EECCEE
Confidence 357899999999999999999999899999999997543 23346789999999999999999999986 345679
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC-CeeeccCCCCCeeeCCCCCeEE
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP-PIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~-gIvHrDLKpsNILLd~~~~vKL 316 (873)
++||||+++|+|.+++.. ...+++..+..|+.||+.||+||| +. +|+||||||+|||++.++.+||
T Consensus 107 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl 173 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKK----------AGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKL 173 (360)
T ss_dssp EEEECCCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEE
T ss_pred EEEEECCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEE
Confidence 999999999999999953 245889999999999999999999 64 8999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
+|||+++...... .....||..|+|||++.+..++.++||||||+++|||+||+.||...
T Consensus 174 ~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 174 CDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp CCCCCCHHHHHHC--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred EECCCCccccccc----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999997653321 22346899999999999999999999999999999999999999763
No 175
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2e-37 Score=359.28 Aligned_cols=248 Identities=25% Similarity=0.358 Sum_probs=201.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|.+.+.||+|+||.||+|++..+++.||||+++... ......+.+|+.+++.++||||+++++++ ....
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~-----~~~~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI-----STPS 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECC
Confidence 357899999999999999999998899999999996432 23346789999999999999999999996 4466
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 90 ~~~lv~E~~~gg~L~~~l~----------~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vk 156 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYIC----------KNGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAK 156 (476)
T ss_dssp EEEEEEECCSSEEHHHHTT----------SSSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEE
T ss_pred EEEEEEeCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeE
Confidence 7999999999999999994 2456899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......
T Consensus 157 L~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~---------- 223 (476)
T 2y94_A 157 IADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT---------- 223 (476)
T ss_dssp ECCCSSCEECCTTC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH----------
T ss_pred EEeccchhhccccc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH----------
Confidence 99999998764322 1223469999999999988765 689999999999999999999997532110
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
....+.+... ..|.. ....+.+++.+||+.||++|||+.||++
T Consensus 224 ---~~~~i~~~~~--------------~~p~~---------~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 224 ---LFKKICDGIF--------------YTPQY---------LNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ---HHHHHHTTCC--------------CCCTT---------CCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---HHHHHhcCCc--------------CCCcc---------CCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 0111111110 00100 0124778999999999999999999876
No 176
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-38 Score=359.07 Aligned_cols=211 Identities=25% Similarity=0.308 Sum_probs=181.2
Q ss_pred CHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeee
Q 002857 151 SYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACS 227 (873)
Q Consensus 151 s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~ 227 (873)
.++++....++|++.++||+|+||.||+|++..+++.||||+++.. .......+.+|+.++..++|+||+++++++
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~- 130 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF- 130 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE-
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE-
Confidence 4455666778999999999999999999999999999999999742 223345689999999999999999999985
Q ss_pred cccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCee
Q 002857 228 RVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNIL 307 (873)
Q Consensus 228 ~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNIL 307 (873)
...+..+|||||+++|+|.++|.. ....+++..++.++.||+.||+||| +.+|+||||||+|||
T Consensus 131 ----~~~~~~~lVmE~~~gg~L~~~l~~---------~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NIL 194 (412)
T 2vd5_A 131 ----QDENYLYLVMEYYVGGDLLTLLSK---------FGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNIL 194 (412)
T ss_dssp ----ECSSEEEEEECCCCSCBHHHHHHH---------HSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEE
T ss_pred ----eeCCEEEEEEcCCCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHee
Confidence 556789999999999999999953 1246899999999999999999999 899999999999999
Q ss_pred eCCCCCeEEeccccccccccccccccccccccccccCCCcccC-------CCCCCcchhhHhHHHHHHHHHhCCCCCCc
Q 002857 308 LNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM-------GHETSSYGDVYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 308 Ld~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-------~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~ 379 (873)
++.++++||+|||+++....... .......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 195 ld~~g~vkL~DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 272 (412)
T 2vd5_A 195 LDRCGHIRLADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA 272 (412)
T ss_dssp ECTTSCEEECCCTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ecCCCCEEEeechhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence 99999999999999987644322 1222356999999999987 45789999999999999999999999975
No 177
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.8e-38 Score=342.82 Aligned_cols=262 Identities=18% Similarity=0.222 Sum_probs=201.2
Q ss_pred CHHHHHHhhcCCCcc-eeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhh-hhccceeeeeee
Q 002857 151 SYEALYSATKGFSSE-NLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNI-IHRKIIKVVTAC 226 (873)
Q Consensus 151 s~~el~~at~~f~~~-~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c 226 (873)
.++......+.|.+. +.||+|+||.||+|++..+++.||||+++... ......+.+|+.++.++ +||||+++++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 334444455677777 89999999999999999899999999987433 23356789999999999 569999999995
Q ss_pred ecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCe
Q 002857 227 SRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNI 306 (873)
Q Consensus 227 ~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNI 306 (873)
......++||||+++|+|.+++.. .....+++.+++.|+.||+.||+||| +.+|+||||||+||
T Consensus 99 -----~~~~~~~lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NI 162 (327)
T 3lm5_A 99 -----ENTSEIILILEYAAGGEIFSLCLP--------ELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNI 162 (327)
T ss_dssp -----ECSSEEEEEEECCTTEEGGGGGSS--------CC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGE
T ss_pred -----EeCCeEEEEEEecCCCcHHHHHHH--------hcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHE
Confidence 456779999999999999999843 23466899999999999999999999 88999999999999
Q ss_pred eeCC---CCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccccc
Q 002857 307 LLND---EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKD 383 (873)
Q Consensus 307 LLd~---~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~ 383 (873)
|++. ++.+||+|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 163 l~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 239 (327)
T 3lm5_A 163 LLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ 239 (327)
T ss_dssp EESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred EEecCCCCCcEEEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch
Confidence 9997 78999999999987643221 22356899999999999999999999999999999999999999653211
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.. + ..+....... +. .. ...+...+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~-~------------~~i~~~~~~~--------------~~-~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 240 ET-Y------------LNISQVNVDY--------------SE-ET----FSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HH-H------------HHHHHTCCCC--------------CT-TT----TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HH-H------------HHHHhccccc--------------Cc-hh----hcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 10 0 0000000000 00 00 0011234778999999999999999998854
No 178
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.1e-37 Score=331.86 Aligned_cols=247 Identities=19% Similarity=0.217 Sum_probs=195.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~ 235 (873)
+++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|+.++.++ +||||+++++++ ...+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~-----~~~~ 84 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW-----AEDD 84 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEE-----EETT
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeee-----ecCC
Confidence 467999999999999999999998899999999987532 33446788999999999 999999999996 4456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-----
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND----- 310 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~----- 310 (873)
..++||||+++|+|.+++... ......+++..++.|+.||+.||+||| +.+|+||||||+|||++.
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~ 155 (289)
T 1x8b_A 85 HMLIQNEYCNGGSLADAISEN------YRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPN 155 (289)
T ss_dssp EEEEEEECCTTCBHHHHHHHH------HHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC------
T ss_pred eEEEEEEecCCCcHHHHHHhh------cccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCc
Confidence 889999999999999999531 112356899999999999999999999 899999999999999984
Q ss_pred --------------CCCeEEeccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCC
Q 002857 311 --------------EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLR 375 (873)
Q Consensus 311 --------------~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~ 375 (873)
...+||+|||++....... ...||..|+|||++.+. .++.++||||||+++|||++|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~ 229 (289)
T 1x8b_A 156 AASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP 229 (289)
T ss_dssp --------------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCC
Confidence 4489999999998654321 23489999999998876 56789999999999999999988
Q ss_pred CCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCC
Q 002857 376 PSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGER 455 (873)
Q Consensus 376 Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eR 455 (873)
++.... . ...+....+.. .+. .....+.+++.+||+.||++|
T Consensus 230 ~~~~~~----~------------~~~~~~~~~~~-------------~~~---------~~~~~~~~li~~~l~~dp~~R 271 (289)
T 1x8b_A 230 LPRNGD----Q------------WHEIRQGRLPR-------------IPQ---------VLSQEFTELLKVMIHPDPERR 271 (289)
T ss_dssp CCSSSH----H------------HHHHHTTCCCC-------------CSS---------CCCHHHHHHHHHHTCSSGGGS
T ss_pred CCcchh----H------------HHHHHcCCCCC-------------CCc---------ccCHHHHHHHHHHhCCCcccC
Confidence 764310 0 11111110000 000 012347789999999999999
Q ss_pred CCHHHHHH
Q 002857 456 MKINDVEL 463 (873)
Q Consensus 456 PTm~EVl~ 463 (873)
||+.|+++
T Consensus 272 ps~~~ll~ 279 (289)
T 1x8b_A 272 PSAMALVK 279 (289)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhh
Confidence 99999864
No 179
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=342.34 Aligned_cols=267 Identities=24% Similarity=0.300 Sum_probs=199.5
Q ss_pred ccCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeee
Q 002857 149 YVSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACS 227 (873)
Q Consensus 149 ~~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~ 227 (873)
.+++.++....++|++.+.||+|+||.||+|++..+++.||||++.... ...+.+.+|+.+++++ +||||+++++++.
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 3444555667889999999999999999999998899999999997543 3447899999999999 8999999999975
Q ss_pred cccc-cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCe
Q 002857 228 RVDY-QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNI 306 (873)
Q Consensus 228 ~~~~-~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNI 306 (873)
.... ......++||||+++|+|.+++.. .....+++..++.|+.||+.||+||| +.+|+||||||+||
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NI 160 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKN--------TKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNV 160 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHH--------SGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGE
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHh--------cccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHE
Confidence 4211 114678999999999999999953 12346888999999999999999999 88999999999999
Q ss_pred eeCCCCCeEEeccccccccccccccccccccccccccCCCcccC-----CCCCCcchhhHhHHHHHHHHHhCCCCCCccc
Q 002857 307 LLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM-----GHETSSYGDVYSFGILLLEMFTGLRPSDDMF 381 (873)
Q Consensus 307 LLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~ 381 (873)
|++.++.+||+|||++........ ......||..|+|||++. +..++.++||||||+++|||++|+.||....
T Consensus 161 l~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 238 (326)
T 2x7f_A 161 LLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238 (326)
T ss_dssp EECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred EEcCCCCEEEeeCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 999999999999999986543221 122346899999999987 5678999999999999999999999996532
Q ss_pred ccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHH
Q 002857 382 KDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDV 461 (873)
Q Consensus 382 ~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EV 461 (873)
.... + ..+..... +.... . .....+.+++.+||+.||++|||+.||
T Consensus 239 ~~~~-~------------~~~~~~~~----------------~~~~~-~----~~~~~l~~li~~~l~~dp~~Rps~~~l 284 (326)
T 2x7f_A 239 PMRA-L------------FLIPRNPA----------------PRLKS-K----KWSKKFQSFIESCLVKNHSQRPATEQL 284 (326)
T ss_dssp HHHH-H------------HHHHHSCC----------------CCCSC-S----CSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred HHHH-H------------HHhhcCcc----------------ccCCc-c----ccCHHHHHHHHHHhccChhhCCCHHHH
Confidence 1110 0 00000000 00000 0 012347789999999999999999998
Q ss_pred HH
Q 002857 462 EL 463 (873)
Q Consensus 462 l~ 463 (873)
++
T Consensus 285 l~ 286 (326)
T 2x7f_A 285 MK 286 (326)
T ss_dssp HT
T ss_pred hh
Confidence 76
No 180
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=3.1e-37 Score=344.80 Aligned_cols=203 Identities=22% Similarity=0.296 Sum_probs=171.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh--------hccceeeeeeeeccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII--------HRKIIKVVTACSRVD 230 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~--------HpNIV~llg~c~~~~ 230 (873)
.++|.+.++||+|+||.||+|++..+++.||||+++.. ....+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46899999999999999999999999999999999733 233467899999999996 788999999864321
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC-CeeeccCCCCCeeeC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP-PIAHCDIKPSNILLN 309 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~-gIvHrDLKpsNILLd 309 (873)
......+|||||+ +++|.+++.. .....+++..++.|+.||+.||+||| +. +|+||||||+|||++
T Consensus 115 -~~~~~~~lv~e~~-~~~l~~~~~~--------~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~ 181 (397)
T 1wak_A 115 -VNGTHICMVFEVL-GHHLLKWIIK--------SNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLS 181 (397)
T ss_dssp -TTEEEEEEEECCC-CCBHHHHHHH--------TTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEEC
T ss_pred -CCCceEEEEEecc-CccHHHHHHh--------cccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEe
Confidence 2456789999999 6677766632 23356899999999999999999999 77 999999999999999
Q ss_pred CCC-------------------------------------------------CeEEeccccccccccccccccccccccc
Q 002857 310 DEM-------------------------------------------------TACVADFGIARFLEATNEQTSSIGVKGT 340 (873)
Q Consensus 310 ~~~-------------------------------------------------~vKLsDFGla~~~~~~~~~~~~~~~~Gt 340 (873)
.++ .+||+|||+++..... .....||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt 256 (397)
T 1wak_A 182 VNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQT 256 (397)
T ss_dssp CCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSC
T ss_pred ccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCC
Confidence 775 8999999999865432 2234689
Q ss_pred cccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 341 TGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 341 ~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
..|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 257 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred CcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 9999999999999999999999999999999999999764
No 181
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.7e-37 Score=332.54 Aligned_cols=247 Identities=23% Similarity=0.327 Sum_probs=200.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|.+.+.||+|+||.||+|++..+++.||||++... .......+.+|++++++++||||+++++++ ...+
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF-----HDRK 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE-----EcCC
Confidence 35789999999999999999999888999999998643 122346789999999999999999999996 4466
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++|+|.+++.. ...+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~k 154 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQK----------HGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELK 154 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEE
T ss_pred EEEEEEEeCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEE
Confidence 78999999999999999843 235889999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||++....... .....|+..|+|||++.+..++.++||||||+++|||++|+.||....... .
T Consensus 155 l~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~-------- 220 (284)
T 2vgo_A 155 IADFGWSVHAPSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--T-------- 220 (284)
T ss_dssp ECCCTTCEECSSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--H--------
T ss_pred EecccccccCcccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH--H--------
Confidence 99999997553321 223468999999999999999999999999999999999999997532111 0
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...+....+ ..|. .....+.+++.+||+.||++|||+.||++
T Consensus 221 ---~~~~~~~~~--------------~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 221 ---HRRIVNVDL--------------KFPP---------FLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---HHHHHTTCC--------------CCCT---------TSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---HHHHhcccc--------------CCCC---------cCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 001111000 0000 01224778999999999999999999976
No 182
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.5e-37 Score=334.42 Aligned_cols=252 Identities=24% Similarity=0.337 Sum_probs=203.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.+.|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++|+||+++++++. .....
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeE
Confidence 356889999999999999999998899999999997543 334578999999999999999999999863 45678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++++|.+++. ...+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||+
T Consensus 96 ~lv~e~~~~~~L~~~~~-----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~ 161 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLE-----------PGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLA 161 (303)
T ss_dssp EEEEECCTTEEHHHHHT-----------TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCCcHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEe
Confidence 99999999999999984 245899999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
|||++........ ......||..|+|||++.+..++.++||||||+++|||++|+.||....... ....+
T Consensus 162 Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~------ 231 (303)
T 3a7i_A 162 DFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLI------ 231 (303)
T ss_dssp CCTTCEECBTTBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHH------
T ss_pred ecccceecCcccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHh------
Confidence 9999986643321 2233468999999999999999999999999999999999999996532111 00000
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLR 466 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le 466 (873)
... . .+.... .....+.+++.+||+.||++|||+.||++..-
T Consensus 232 -----~~~----~------------~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 232 -----PKN----N------------PPTLEG------NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp -----HHS----C------------CCCCCS------SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred -----hcC----C------------CCCCcc------ccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 000 0 000000 01234778999999999999999999987543
No 183
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=9.3e-38 Score=343.00 Aligned_cols=275 Identities=23% Similarity=0.293 Sum_probs=199.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|++++++++||||+++++++ .....
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC-----KKKKR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEe-----ecCCE
Confidence 35789999999999999999999988999999998644332 235678999999999999999999996 34667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++++|.+++. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 99 ~~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl 165 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLEL----------FPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKL 165 (331)
T ss_dssp EEEEEECCSEEHHHHHHH----------STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEecCCcchHHHHHh----------hccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEE
Confidence 899999999999998863 2456899999999999999999999 889999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh--h
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ--S 393 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~--~ 393 (873)
+|||+++....... ......||..|+|||++.+. .++.++||||||+++|||++|+.||........ +..... .
T Consensus 166 ~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~ 242 (331)
T 4aaa_A 166 CDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLG 242 (331)
T ss_dssp CCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHC
T ss_pred EeCCCceeecCCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhC
Confidence 99999986543221 22234589999999998875 789999999999999999999999976432211 111111 1
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCC---CchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPS---SSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~---~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...+.........-. .... ..+. ..............+.+++.+||+.||++|||+.||++
T Consensus 243 ~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 243 NLIPRHQELFNKNPV--------FAGV-RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp SCCHHHHHHHHHCGG--------GTTC-CCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCChhhhhHhhhccc--------cccc-cCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 111111111110000 0000 0000 00000111122346889999999999999999999875
No 184
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1e-37 Score=336.57 Aligned_cols=254 Identities=22% Similarity=0.278 Sum_probs=196.6
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
..++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++ ...+..
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 91 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY-----YHDGKL 91 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECC-CE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeee-----eeCCeE
Confidence 356899999999999999999999888999999999866666678899999999999999999999996 345678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++++|.+++.. ....+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||+
T Consensus 92 ~lv~e~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~ 159 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLE---------LDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLA 159 (302)
T ss_dssp EEEEECCTTEEHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCCcHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEE
Confidence 999999999999998842 2345899999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCccc-----CCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYG-----MGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l-----~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
|||++....... .......||..|+|||++ .+..++.++||||||+++|||++|+.||........ .
T Consensus 160 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~----- 231 (302)
T 2j7t_A 160 DFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-L----- 231 (302)
T ss_dssp CCHHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-H-----
T ss_pred ECCCCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-H-----
Confidence 999986432211 112234589999999987 466789999999999999999999999975321110 0
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+... . .+...... .....+.+++.+||+.||++|||+.||++
T Consensus 232 -------~~~~~~----~------------~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 232 -------LKIAKS----D------------PPTLLTPS----KWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -------HHHHHS----C------------CCCCSSGG----GSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -------HHHhcc----C------------CcccCCcc----ccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000000 0 00000000 01234778999999999999999998864
No 185
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.9e-38 Score=371.18 Aligned_cols=257 Identities=28% Similarity=0.445 Sum_probs=203.6
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
...++|++.++||+|+||.||+|.+. ++..||||+++.... ..+.|.+|+++|++++|+||+++++++. .+.
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~------~~~ 335 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEP 335 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSS
T ss_pred cchhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEe------ecc
Confidence 34567888999999999999999985 456799999975443 3478999999999999999999999863 245
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+++|+|.++|+. .....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 336 ~~lv~e~~~~gsL~~~l~~--------~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl 404 (535)
T 2h8h_A 336 IYIVTEYMSKGSLLDFLKG--------ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKV 404 (535)
T ss_dssp CEEEECCCTTEEHHHHHSH--------HHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred ceEeeehhcCCcHHHHHhh--------cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEE
Confidence 7999999999999999953 12245889999999999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcC
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
+|||+++...... ........++..|+|||++.+..++.++|||||||+||||+| |+.||....... ..
T Consensus 405 ~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~------- 474 (535)
T 2h8h_A 405 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VL------- 474 (535)
T ss_dssp CCTTSTTTCCCHH-HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HH-------
T ss_pred cccccceecCCCc-eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HH-------
Confidence 9999998664321 111223346789999999998899999999999999999999 999997532111 00
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLI 468 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i 468 (873)
+.+.... ..+.. ..+...+.+|+.+||+.||++|||+.+|++.|+.+
T Consensus 475 -----~~i~~~~--------------~~~~~-------~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 475 -----DQVERGY--------------RMPCP-------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp -----HHHHTTC--------------CCCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred -----HHHHcCC--------------CCCCC-------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0000000 00000 01233578899999999999999999999999875
No 186
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.7e-38 Score=348.39 Aligned_cols=248 Identities=23% Similarity=0.290 Sum_probs=196.2
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc---chhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD---ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~---~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
+.|...+.||+|+||.||+|++..+++.||||++...... ..+.+.+|++++++++||||+++++++. ..+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----REHT 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCe
Confidence 4588899999999999999999889999999999754322 2356889999999999999999999963 4567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+. |+|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 129 ~~lv~e~~~-g~l~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL 195 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEV---------HKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKL 195 (348)
T ss_dssp EEEEEECCS-EEHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEE
T ss_pred EEEEEecCC-CCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEE
Confidence 899999997 688888742 2356899999999999999999999 889999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+|||+++..... ....||..|+|||++. ...++.++||||||+++|||++|+.||....... .
T Consensus 196 ~DfG~a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~------- 261 (348)
T 1u5q_A 196 GDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-A------- 261 (348)
T ss_dssp CCCTTCBSSSSB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-H-------
T ss_pred eeccCceecCCC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-H-------
Confidence 999999865322 2346899999999874 5678999999999999999999999986532110 0
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGL 465 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~L 465 (873)
+..+.... .+.... . .....+.+++.+||+.||++|||+.+|++..
T Consensus 262 -----~~~~~~~~----------------~~~~~~-~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 262 -----LYHIAQNE----------------SPALQS-G----HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp -----HHHHHHSC----------------CCCCCC-T----TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred -----HHHHHhcC----------------CCCCCC-C----CCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 00010000 000000 0 0122477899999999999999999997643
No 187
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.4e-38 Score=356.52 Aligned_cols=261 Identities=15% Similarity=0.145 Sum_probs=192.4
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHH---HHHhhhhccceeeeeeeeccc--
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECE---VMRNIIHRKIIKVVTACSRVD-- 230 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~---iL~~L~HpNIV~llg~c~~~~-- 230 (873)
.++|.+.+.||+|+||.||+|++..+++.||||++... .....+.+.+|++ +|++++|||||++++.+....
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788999999999999999998888999999999733 3344578899994 555568999999984432100
Q ss_pred ccCC------------c-----eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC
Q 002857 231 YQGN------------D-----FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK 293 (873)
Q Consensus 231 ~~~~------------~-----~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s 293 (873)
+... + ..+|||||+ +|+|.+++.... ........+++..++.|+.||+.||+||| +
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~---~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~ 224 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLL---SHSSTHKSLVHHARLQLTLQVIRLLASLH---H 224 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHH---HTTTTTHHHHHHHHHHHHHHHHHHHHHHH---H
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcc---ccccccccccHHHHHHHHHHHHHHHHHHH---h
Confidence 1111 1 378999999 689999996411 01111234667889999999999999999 8
Q ss_pred CCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCC-----------CCCcchhhHh
Q 002857 294 PPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-----------ETSSYGDVYS 362 (873)
Q Consensus 294 ~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-----------~~s~ksDVwS 362 (873)
.+|+||||||+|||++.++.+||+|||+++.... ......| ..|+|||++.+. .++.++||||
T Consensus 225 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwS 298 (377)
T 3byv_A 225 YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWA 298 (377)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHH
T ss_pred CCeecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHH
Confidence 8999999999999999999999999999985322 2223457 999999999887 8999999999
Q ss_pred HHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHH
Q 002857 363 FGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICE 442 (873)
Q Consensus 363 fGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~ 442 (873)
|||++|||+||+.||........ .. .+ ... .+ .+...+.+
T Consensus 299 lG~il~elltg~~Pf~~~~~~~~--~~-----------~~----~~~-------------~~----------~~~~~~~~ 338 (377)
T 3byv_A 299 LGLVIYWIWCADLPITKDAALGG--SE-----------WI----FRS-------------CK----------NIPQPVRA 338 (377)
T ss_dssp HHHHHHHHHHSSCCC------CC--SG-----------GG----GSS-------------CC----------CCCHHHHH
T ss_pred HHHHHHHHHHCCCCCcccccccc--hh-----------hh----hhh-------------cc----------CCCHHHHH
Confidence 99999999999999965321110 00 00 000 00 01224778
Q ss_pred HHHHhhccCcCCCCCHHHHHH--HHHHHHHhh
Q 002857 443 IGVACSAELPGERMKINDVEL--GLRLIKKKL 472 (873)
Q Consensus 443 L~~~CL~~dP~eRPTm~EVl~--~Le~i~~~l 472 (873)
++.+||+.||++|||+.|+++ .++.++...
T Consensus 339 li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~ 370 (377)
T 3byv_A 339 LLEGFLRYPKEDRLLPLQAMETPEYEQLRTEL 370 (377)
T ss_dssp HHHHHTCSSGGGCCCHHHHHTSHHHHHHHHHH
T ss_pred HHHHHcCCCchhCCCHHHHhhChHHHHHHHHH
Confidence 999999999999999999986 555554443
No 188
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=335.69 Aligned_cols=281 Identities=18% Similarity=0.248 Sum_probs=197.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeeccc--------
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVD-------- 230 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~-------- 230 (873)
.++|.+.+.||+|+||.||+|.+..+++.||||++........+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 468999999999999999999998889999999998665556678999999999999999999999864221
Q ss_pred -ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC
Q 002857 231 -YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN 309 (873)
Q Consensus 231 -~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd 309 (873)
.......++||||++ |+|.+++. ...+++..++.++.||+.||+||| +.+|+||||||+|||++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~-----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~ 154 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLE-----------QGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFIN 154 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHT-----------TCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhh-----------cCCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEc
Confidence 134567899999997 69999983 245889999999999999999999 89999999999999997
Q ss_pred -CCCCeEEeccccccccccccc-cccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchh
Q 002857 310 -DEMTACVADFGIARFLEATNE-QTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLN 386 (873)
Q Consensus 310 -~~~~vKLsDFGla~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~ 386 (873)
+++.+||+|||+++....... ........+|..|+|||++.+ ..++.++||||||+++|||+||+.||....... .
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~ 233 (320)
T 2i6l_A 155 TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-Q 233 (320)
T ss_dssp TTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred CCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 567999999999987643221 112223457899999998765 678999999999999999999999997643211 1
Q ss_pred hHHHHhhc--Cch-hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 387 LQNWVQSA--LPE-RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 387 l~~~~~~~--~~~-~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+....... ... ...++.... ... .......+... ...........+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 234 MQLILESIPVVHEEDRQELLSVI-PVY------IRNDMTEPHKP-LTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHSCCCCHHHHHHHHTTS-CHH------HHHHTTSCCCC-HHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhcCCCchhhhhhhhhcC-ccc------ccccccCCCCC-hhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 11111110 000 111111100 000 00000001000 00111122346889999999999999999999875
No 189
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=8e-38 Score=374.72 Aligned_cols=253 Identities=24% Similarity=0.358 Sum_probs=197.5
Q ss_pred eeecccCceEEEEEEEc--CCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceEEEEE
Q 002857 166 NLIGAGNFASVYKGILF--EGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~--~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
+.||+|+||.||+|.+. ..++.||||+++.... ...+.+.+|+++|++++|||||+++++|. .+..+|||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~------~~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------AESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE------SSSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe------cCCEEEEE
Confidence 47999999999999664 4567899999975432 23478999999999999999999999963 23478999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccc
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGI 321 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGl 321 (873)
||+++|+|.++|.. ...+++..++.|+.||+.||+||| +.+|+||||||+||||+.++.+||+|||+
T Consensus 449 E~~~~g~L~~~l~~----------~~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGl 515 (635)
T 4fl3_A 449 EMAELGPLNKYLQQ----------NRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL 515 (635)
T ss_dssp ECCTTEEHHHHHHH----------CTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTH
T ss_pred EccCCCCHHHHHhh----------CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCC
Confidence 99999999999942 356899999999999999999999 89999999999999999999999999999
Q ss_pred cccccccccc-ccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHhhcCchhH
Q 002857 322 ARFLEATNEQ-TSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQSALPERV 399 (873)
Q Consensus 322 a~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~~~~~~~l 399 (873)
++.+...... .......+|..|+|||++.+..++.++|||||||++|||+| |+.||....... +
T Consensus 516 a~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--------------~ 581 (635)
T 4fl3_A 516 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--------------V 581 (635)
T ss_dssp HHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------------H
T ss_pred ccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------------H
Confidence 9876543321 12223346789999999999999999999999999999999 999997632211 1
Q ss_pred HHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 400 EEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 400 ~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
.+.+...... +.. ..+...+.+|+..||+.||++|||+.+|+++|+.+...+
T Consensus 582 ~~~i~~~~~~--------------~~p-------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 582 TAMLEKGERM--------------GCP-------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp HHHHHTTCCC--------------CCC-------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCC--------------CCC-------CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 1111110000 000 012345889999999999999999999999999886654
No 190
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-37 Score=347.28 Aligned_cols=291 Identities=19% Similarity=0.213 Sum_probs=202.1
Q ss_pred HHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccc----
Q 002857 156 YSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY---- 231 (873)
Q Consensus 156 ~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~---- 231 (873)
....++|.+.+.||+|+||.||+|++..+++.||||++.... ....+|+++|+.++|+||+++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 445678999999999999999999999999999999986432 233479999999999999999999753221
Q ss_pred -----------------------------cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHH
Q 002857 232 -----------------------------QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVA 282 (873)
Q Consensus 232 -----------------------------~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa 282 (873)
......++||||++ |+|.+.+... ......+++..+..|+.||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~------~~~~~~l~~~~~~~i~~qi~ 151 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSF------IRSGRSIPMNLISIYIYQLF 151 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHH------HHTTCCCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHH------HhcCCCCCHHHHHHHHHHHH
Confidence 23445889999998 5888887531 12356789999999999999
Q ss_pred HHHHHHhhCCCCCeeeccCCCCCeeeC-CCCCeEEeccccccccccccccccccccccccccCCCcccCCC-CCCcchhh
Q 002857 283 SALEYLHLGCKPPIAHCDIKPSNILLN-DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDV 360 (873)
Q Consensus 283 ~gL~yLH~~~s~gIvHrDLKpsNILLd-~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDV 360 (873)
+||+||| +.+|+||||||+|||++ .++.+||+|||+++.+..... .....+|..|+|||++.+. .++.++||
T Consensus 152 ~aL~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di 225 (383)
T 3eb0_A 152 RAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDL 225 (383)
T ss_dssp HHHHHHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHH
T ss_pred HHHHHHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhh
Confidence 9999999 89999999999999998 688999999999986644322 2234689999999998775 48999999
Q ss_pred HhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHH
Q 002857 361 YSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSI 440 (873)
Q Consensus 361 wSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L 440 (873)
||||+++|||++|+.||....... .+...+...-......+... ...+.. ..........+ ...........+
T Consensus 226 wslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~--~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~ 298 (383)
T 3eb0_A 226 WSIGCVFGELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRM--NPHYTE-VRFPTLKAKDW---RKILPEGTPSLA 298 (383)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHH--CTTC---CCCCCCCCCCH---HHHSCTTCCHHH
T ss_pred hhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHh--Cccccc-ccCCccCcccH---HhhCCCCCCHHH
Confidence 999999999999999997632211 11121111111111111000 000000 00000000000 000001123357
Q ss_pred HHHHHHhhccCcCCCCCHHHHHH--HHHHHHH
Q 002857 441 CEIGVACSAELPGERMKINDVEL--GLRLIKK 470 (873)
Q Consensus 441 ~~L~~~CL~~dP~eRPTm~EVl~--~Le~i~~ 470 (873)
.+|+.+||+.||++|||+.|+++ .++.++.
T Consensus 299 ~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 299 IDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred HHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence 89999999999999999999984 3455444
No 191
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=7.6e-38 Score=335.15 Aligned_cols=254 Identities=20% Similarity=0.219 Sum_probs=184.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-c-hhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-A-SKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-~-~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|.+..+++.||||+++..... . .+.+.++...++.++||||+++++++ ...+.
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~-----~~~~~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL-----FREGD 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeee-----eccCC
Confidence 46899999999999999999999999999999998744222 2 23344455557788999999999996 34567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC-CeeeccCCCCCeeeCCCCCeE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP-PIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~-gIvHrDLKpsNILLd~~~~vK 315 (873)
.++||||++ |+|.+++... ......+++..++.|+.||+.||+||| +. +|+||||||+|||++.++.+|
T Consensus 81 ~~lv~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~k 150 (290)
T 3fme_A 81 VWICMELMD-TSLDKFYKQV------IDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVK 150 (290)
T ss_dssp EEEEEECCS-EEHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEE
T ss_pred EEEEEehhc-cchHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEE
Confidence 899999997 5988887431 123567999999999999999999999 76 999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCccc----CCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHH
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYG----MGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWV 391 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l----~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~ 391 (873)
|+|||+++....... .....||..|+|||++ .+..++.++||||||+++|||+||+.||.........+.
T Consensus 151 l~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--- 224 (290)
T 3fme_A 151 MCDFGISGYLVDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK--- 224 (290)
T ss_dssp BCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH---
T ss_pred EeecCCccccccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH---
Confidence 999999986644322 2223589999999995 556789999999999999999999999975222111111
Q ss_pred hhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 392 QSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 392 ~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+...... .+.. .....+.+++.+||+.||++|||+.||++
T Consensus 225 ---------~~~~~~~~~-------------~~~~--------~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 225 ---------QVVEEPSPQ-------------LPAD--------KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---------HHHHSCCCC-------------CCTT--------TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---------HHhccCCCC-------------cccc--------cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111110000 0000 01234788999999999999999999986
No 192
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.1e-37 Score=335.59 Aligned_cols=250 Identities=22% Similarity=0.291 Sum_probs=201.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++|+||+++++++ ...+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~ 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDND 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeee-----ccCC
Confidence 457899999999999999999999899999999986432 22346788999999999999999999996 4466
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++.. ...+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~k 155 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKR----------RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVK 155 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEE
T ss_pred EEEEEEecCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEE
Confidence 78999999999999998842 346899999999999999999999 88999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||+++....... ......||..|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 156 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----------- 222 (294)
T 2rku_A 156 IGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----------- 222 (294)
T ss_dssp ECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------
T ss_pred EEeccCceecccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----------
Confidence 999999986543221 1223468999999999999899999999999999999999999997532111
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
....+..... ..|. .....+.+++.+||+.||++|||+.|+++.
T Consensus 223 --~~~~~~~~~~--------------~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 223 --TYLRIKKNEY--------------SIPK---------HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp --HHHHHHTTCC--------------CCCT---------TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --HHHHHhhccC--------------CCcc---------ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000100000 0000 011247789999999999999999998764
No 193
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.3e-37 Score=331.32 Aligned_cols=249 Identities=25% Similarity=0.358 Sum_probs=192.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|.+.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+.++++++||||+++++++ ...+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI-----STPT 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEE-----ecCC
Confidence 46899999999999999999999888999999998643 223446789999999999999999999996 4466
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++.. ...+++..++.++.||+.||+||| +.+|+|+||||+|||++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~ 151 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICK----------HGRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAK 151 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeccCCCcHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEE
Confidence 79999999999999999943 245889999999999999999999 88999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||++....... ......++..|+|||++.+..+ +.++||||||+++|||++|+.||....... ..
T Consensus 152 l~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~------ 220 (276)
T 2h6d_A 152 IADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--LF------ 220 (276)
T ss_dssp ECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH------
T ss_pred EeecccccccCCCc---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HH------
Confidence 99999998654322 1223458999999999988765 689999999999999999999996521110 00
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+..... ..|. .....+.+++.+||+.||++|||+.||++.
T Consensus 221 -----~~~~~~~~--------------~~~~---------~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 221 -----KKIRGGVF--------------YIPE---------YLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----HHHHHCCC--------------CCCT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----HHhhcCcc--------------cCch---------hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00000000 0000 012247789999999999999999999863
No 194
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3e-37 Score=337.32 Aligned_cols=252 Identities=22% Similarity=0.292 Sum_probs=194.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--------CcchhHHHHHHHHHHhhhhccceeeeeeeeccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--------HDASKSFTVECEVMRNIIHRKIIKVVTACSRVD 230 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--------~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~ 230 (873)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--- 85 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD--- 85 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE---
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc---
Confidence 467999999999999999999999999999999986432 122346889999999999999999999853
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
. +..++||||+++|+|.+++. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.
T Consensus 86 --~-~~~~lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~ 149 (322)
T 2ycf_A 86 --A-EDYYIVLELMEGGELFDKVV----------GNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSS 149 (322)
T ss_dssp --S-SSEEEEEECCTTEETHHHHS----------TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESS
T ss_pred --C-CceEEEEecCCCCcHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEec
Confidence 2 23799999999999999884 3456899999999999999999999 899999999999999987
Q ss_pred CCC---eEEeccccccccccccccccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccc
Q 002857 311 EMT---ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDN 384 (873)
Q Consensus 311 ~~~---vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~ 384 (873)
++. +||+|||+++...... ......||..|+|||++. ...++.++||||||+++|||++|+.||.......
T Consensus 150 ~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 226 (322)
T 2ycf_A 150 QEEDCLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226 (322)
T ss_dssp SSSSCCEEECCCTTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS
T ss_pred CCCCCeEEEccCccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH
Confidence 654 9999999998654321 122346899999999863 5678999999999999999999999997532211
Q ss_pred hhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 385 LNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 385 ~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+...+.. ..... . ..........+.+++.+||+.||++|||+.|+++
T Consensus 227 -~~~~~~~~-----------~~~~~-~------------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 227 -SLKDQITS-----------GKYNF-I------------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -CHHHHHHH-----------TCCCC-C------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHHHHHHh-----------Ccccc-C------------------chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 11111100 00000 0 0000111335789999999999999999999984
No 195
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.8e-38 Score=339.21 Aligned_cols=270 Identities=25% Similarity=0.316 Sum_probs=183.4
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
..++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.++++++||||+++++++ ...+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 87 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF-----VVKDE 87 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEE-----ESSSC
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEE-----eecCC
Confidence 3578999999999999999999988889999999986433 23456788999999999999999999996 34557
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++++|.+++...... .......+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl 162 (303)
T 2vwi_A 88 LWLVMKLLSGGSVLDIIKHIVAK--GEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQI 162 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHT--TTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEE
T ss_pred cEEEehhccCCchHHHHHHHhhc--cccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEE
Confidence 89999999999999998532111 1123456899999999999999999999 889999999999999999999999
Q ss_pred ecccccccccccccc---ccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 317 ADFGIARFLEATNEQ---TSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 317 sDFGla~~~~~~~~~---~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
+|||++......... .......||..|+|||++.+ ..++.++||||||+++|||++|+.||........ ......
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~ 241 (303)
T 2vwi_A 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQ 241 (303)
T ss_dssp CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHHHHT
T ss_pred EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-HHHHhc
Confidence 999999866433211 11223468999999999876 4689999999999999999999999976322211 000000
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
...........+..+. ......+.+++.+||+.||++|||+.||++
T Consensus 242 ~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 242 NDPPSLETGVQDKEML-------------------------KKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp SSCCCTTC-----CCC-------------------------CCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCCCccccccccchhh-------------------------hhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0000000000000000 001234778999999999999999999875
No 196
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-37 Score=342.54 Aligned_cols=277 Identities=22% Similarity=0.280 Sum_probs=195.9
Q ss_pred HhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-----chhHHHHHHHHHHhhhhccceeeeeeeecccc
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-----ASKSFTVECEVMRNIIHRKIIKVVTACSRVDY 231 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-----~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~ 231 (873)
...++|.+.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|++++++++||||+++++++
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----- 81 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF----- 81 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE-----
Confidence 3457899999999999999999999888999999998643221 235788999999999999999999996
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE 311 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~ 311 (873)
......++||||+++ +|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.+
T Consensus 82 ~~~~~~~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~ 148 (346)
T 1ua2_A 82 GHKSNISLVFDFMET-DLEVIIKD---------NSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDEN 148 (346)
T ss_dssp CCTTCCEEEEECCSE-EHHHHHTT---------CCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTT
T ss_pred eeCCceEEEEEcCCC-CHHHHHHh---------cCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCC
Confidence 445678999999976 89888842 3456889999999999999999999 8999999999999999999
Q ss_pred CCeEEeccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002857 312 MTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 312 ~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~ 390 (873)
+.+||+|||+++.+..... ......+|..|+|||++.+. .++.++||||||+++|||++|..||....... .+...
T Consensus 149 ~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i 225 (346)
T 1ua2_A 149 GVLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRI 225 (346)
T ss_dssp CCEEECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred CCEEEEecccceeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHH
Confidence 9999999999987643221 22334689999999998764 58999999999999999999999987632211 11111
Q ss_pred HhhcCch---hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 391 VQSALPE---RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 391 ~~~~~~~---~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
....... .+.++.. + .+ .......+... ...........+.+++.+||+.||++|||+.|+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~--~-~~------~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 226 FETLGTPTEEQWPDMCS--L-PD------YVTFKSFPGIP-LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHHHCCCCTTTSSSTTS--S-TT------CCCCCCCCCCC-HHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHcCCCChhhhhhhcc--C-cc------cccccccCCCC-hHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 1100000 0000000 0 00 00000000000 000111123458899999999999999999998653
No 197
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.8e-37 Score=339.76 Aligned_cols=209 Identities=20% Similarity=0.294 Sum_probs=172.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccc---cC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDY---QG 233 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~---~~ 233 (873)
.++|++.+.||+|+||.||+|++..+++.||||++..... .....+.+|++++++++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 3679999999999999999999999999999999864332 234578899999999999999999999754221 11
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
.+..++||||+++ +|.+.+.. ....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~ 162 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSN---------VLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGV 162 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHC---------TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSC
T ss_pred CceEEEEEeccCC-CHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCC
Confidence 4568999999975 77777742 3456899999999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccc--cccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 314 ACVADFGIARFLEATNE--QTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~--~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
+||+|||+++.+..... ........||..|+|||++.+ ..++.++||||||+++|||+||+.||...
T Consensus 163 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 232 (351)
T 3mi9_A 163 LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232 (351)
T ss_dssp EEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred EEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999987643221 122234568999999998876 45899999999999999999999999763
No 198
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-37 Score=346.47 Aligned_cols=280 Identities=19% Similarity=0.213 Sum_probs=195.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecccc-cCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRVDY-QGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~-~~~~ 235 (873)
.++|.+.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|+++|++++||||+++++++..... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 5689999999999999999999999999999999864322 234678899999999999999999999753211 1224
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+ +++|.+++.. ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----------~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~k 168 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----------EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELK 168 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEE
T ss_pred eEEEEEecC-CCCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEE
Confidence 569999999 8899999842 35889999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++..... .....+|..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+.... ..
T Consensus 169 l~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~-~~ 241 (367)
T 1cm8_A 169 ILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIM-KV 241 (367)
T ss_dssp ECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH-HH
T ss_pred EEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-Hh
Confidence 9999999865332 223468999999999877 679999999999999999999999997632211 111111 11
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
......+++...-... .+.........+.. ............+.+++.+||+.||++|||+.|+++
T Consensus 242 ~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 242 TGTPPAEFVQRLQSDE--AKNYMKGLPELEKK-DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HCCCCHHHHHTCSCHH--HHHHHHHSCCCCCC-CGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cCCCCHHHHHHhhhHH--HHHHHHhCCCCCCC-CHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000011111000000 00000000000000 000001112335789999999999999999998865
No 199
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.7e-37 Score=334.93 Aligned_cols=209 Identities=23% Similarity=0.346 Sum_probs=175.8
Q ss_pred HhhcCCCcceeecccCceEEEEEEEc-CCCcEEEEEEeeccC--CcchhHHHHHHHHHHhh---hhccceeeeeeeeccc
Q 002857 157 SATKGFSSENLIGAGNFASVYKGILF-EGAPAVAIKVFNFLH--HDASKSFTVECEVMRNI---IHRKIIKVVTACSRVD 230 (873)
Q Consensus 157 ~at~~f~~~~~LG~G~fG~VYkg~~~-~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L---~HpNIV~llg~c~~~~ 230 (873)
.+.++|++.+.||+|+||.||+|++. .+++.||||+++... ......+.+|+.+++.+ +||||+++++++....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 45688999999999999999999985 678899999987432 22335678898888877 7999999999975332
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
.......++||||+. |+|.+++.. .....+++..++.++.||+.||.||| +.+|+||||||+|||++.
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~--------~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~ 155 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDK--------VPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTS 155 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHH--------SCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECT
T ss_pred cCCCceEEEEEecCC-CCHHHHHHh--------cccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcC
Confidence 235567899999997 699999853 23345899999999999999999999 889999999999999999
Q ss_pred CCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 311 EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 311 ~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
++.+||+|||+++...... ......||..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 156 ~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 156 SGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp TCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCCEEEecCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999998654322 223356899999999999999999999999999999999999999763
No 200
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.5e-37 Score=345.01 Aligned_cols=254 Identities=24% Similarity=0.311 Sum_probs=197.2
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCce
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~ 236 (873)
..++|++.+.||+|+||.||+|.+..+++.||||+++.... .+.+|++++.++ +||||+++++++ .+...
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~ 90 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVY-----DDGKY 90 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEE-----ECSSE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEE-----EcCCE
Confidence 35679999999999999999999999999999999975432 346789999888 799999999995 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC----C
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE----M 312 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~----~ 312 (873)
.++||||+++|+|.+++. ....+++..+..++.||+.||+||| +.+|+||||||+|||+.++ +
T Consensus 91 ~~lv~E~~~gg~L~~~i~----------~~~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~ 157 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKIL----------RQKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPE 157 (342)
T ss_dssp EEEEECCCCSCBHHHHHH----------TCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGG
T ss_pred EEEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcC
Confidence 999999999999999984 2456899999999999999999999 8999999999999998533 3
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
.+||+|||+++....... ......||..|+|||++.+..++.++|||||||++|||++|+.||.....+.
T Consensus 158 ~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-------- 227 (342)
T 2qr7_A 158 SIRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-------- 227 (342)
T ss_dssp GEEECCCTTCEECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC--------
T ss_pred eEEEEECCCcccCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC--------
Confidence 599999999987644322 2223468999999999988888999999999999999999999997532111
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+++.......+. .....+. .....+.+++.+||+.||++|||+.||++.
T Consensus 228 ------~~~~~~~i~~~~~~-------~~~~~~~--------~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 228 ------PEEILARIGSGKFS-------LSGGYWN--------SVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ------HHHHHHHHHHCCCC-------CCSTTTT--------TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ------HHHHHHHHccCCcc-------cCccccc--------cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01111111111000 0000000 012347789999999999999999998753
No 201
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=7.9e-37 Score=341.59 Aligned_cols=258 Identities=21% Similarity=0.319 Sum_probs=202.0
Q ss_pred HHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--------chhHHHHHHHHHHhh-hhccceeee
Q 002857 153 EALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--------ASKSFTVECEVMRNI-IHRKIIKVV 223 (873)
Q Consensus 153 ~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--------~~~~f~~Ei~iL~~L-~HpNIV~ll 223 (873)
.......++|.+.+.||+|+||.||+|++..+|+.||||+++..... ..+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 33445567899999999999999999999888999999998754321 135678899999999 799999999
Q ss_pred eeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 002857 224 TACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKP 303 (873)
Q Consensus 224 g~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKp 303 (873)
+++ ......++||||+++++|.+++.. ...+++..++.|+.||+.||.||| +.+|+||||||
T Consensus 167 ~~~-----~~~~~~~lv~e~~~g~~L~~~l~~----------~~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp 228 (365)
T 2y7j_A 167 DSY-----ESSSFMFLVFDLMRKGELFDYLTE----------KVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKP 228 (365)
T ss_dssp EEE-----EBSSEEEEEECCCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred EEE-----eeCCEEEEEEEeCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence 985 446789999999999999999842 346899999999999999999999 88999999999
Q ss_pred CCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCC------CCCCcchhhHhHHHHHHHHHhCCCCC
Q 002857 304 SNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG------HETSSYGDVYSFGILLLEMFTGLRPS 377 (873)
Q Consensus 304 sNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~------~~~s~ksDVwSfGvvL~ELlTGk~Pf 377 (873)
+|||++.++.+||+|||++..+..... .....||+.|+|||++.+ ..++.++||||||+++|||+||+.||
T Consensus 229 ~NIl~~~~~~ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf 305 (365)
T 2y7j_A 229 ENILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305 (365)
T ss_dssp GGEEECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred HHEEECCCCCEEEEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCC
Confidence 999999999999999999987654322 233568999999998753 35889999999999999999999999
Q ss_pred CcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCC
Q 002857 378 DDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMK 457 (873)
Q Consensus 378 ~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPT 457 (873)
...... ... ..+......... .........+.+++.+||+.||++|||
T Consensus 306 ~~~~~~--~~~-----------~~i~~~~~~~~~-------------------~~~~~~~~~~~~li~~~L~~dP~~Rps 353 (365)
T 2y7j_A 306 WHRRQI--LML-----------RMIMEGQYQFSS-------------------PEWDDRSSTVKDLISRLLQVDPEARLT 353 (365)
T ss_dssp CCSSHH--HHH-----------HHHHHTCCCCCH-------------------HHHSSSCHHHHHHHHHHSCSSTTTSCC
T ss_pred CCCCHH--HHH-----------HHHHhCCCCCCC-------------------cccccCCHHHHHHHHHHcCCChhHCcC
Confidence 652111 000 011110000000 000011234788999999999999999
Q ss_pred HHHHHH
Q 002857 458 INDVEL 463 (873)
Q Consensus 458 m~EVl~ 463 (873)
+.|+++
T Consensus 354 ~~ell~ 359 (365)
T 2y7j_A 354 AEQALQ 359 (365)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999875
No 202
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=8.3e-38 Score=344.53 Aligned_cols=250 Identities=22% Similarity=0.290 Sum_probs=201.6
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|.+.+.||+|+||.||++.+..+++.||+|++.... ....+.+.+|+.++++++|+||+++++++ ...+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~ 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDND 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecCC
Confidence 457899999999999999999999999999999987432 23346789999999999999999999996 4466
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++.. ...+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~----------~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~k 181 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKR----------RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVK 181 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCCHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEE
Confidence 79999999999999998842 346899999999999999999999 88999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSAL 395 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~ 395 (873)
|+|||+++....... ......||..|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 182 l~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---------- 249 (335)
T 2owb_A 182 IGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET---------- 249 (335)
T ss_dssp ECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------
T ss_pred EeeccCceecccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH----------
Confidence 999999986643221 22234689999999999998999999999999999999999999975321110
Q ss_pred chhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 396 PERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 396 ~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
...+..... ..+. .....+.+++.+||+.||++|||+.||++.
T Consensus 250 ---~~~~~~~~~--------------~~~~---------~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 250 ---YLRIKKNEY--------------SIPK---------HINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ---HHHHHHTCC--------------CCCT---------TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---HHHHhcCCC--------------CCCc---------cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000000000 0000 011247789999999999999999998763
No 203
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.6e-37 Score=341.81 Aligned_cols=255 Identities=20% Similarity=0.256 Sum_probs=195.9
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHH-HHhhhhccceeeeeeeecccccCCc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEV-MRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~i-L~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
..++|++.+.||+|+||.||+|.+..+++.||||+++.... .....+..|+.+ ++.++||||+++++++ ...+
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~-----~~~~ 123 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL-----FREG 123 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEE-----ECSS
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEE-----EeCC
Confidence 35688999999999999999999988999999999975432 233456666665 6778999999999996 3456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC-CeeeccCCCCCeeeCCCCCe
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP-PIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~-gIvHrDLKpsNILLd~~~~v 314 (873)
..++||||+++ +|.+++... ......+++..++.|+.||+.||+||| +. +|+||||||+|||++.++.+
T Consensus 124 ~~~lv~e~~~~-~L~~~l~~~------~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~ 193 (340)
T 3an0_A 124 DVWICMELMDT-SLDKFYKQV------IDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQV 193 (340)
T ss_dssp CEEEEECCCSE-EHHHHHHHH------HHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCE
T ss_pred cEEEEHHHhhC-cHHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCE
Confidence 78999999975 999988531 123567899999999999999999999 65 99999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccC----CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM----GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~----~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~ 390 (873)
||+|||+++...... ......||..|+|||++. ...++.++||||||+++|||+||+.||.........
T Consensus 194 kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~---- 266 (340)
T 3an0_A 194 KMCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ---- 266 (340)
T ss_dssp EECCCSHHHHHSCHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH----
T ss_pred EEeeCCCceeccccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHH----
Confidence 999999998664321 122346899999999964 347899999999999999999999999753211111
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
+..++.... +.... . .+...+.+++.+||+.||++|||+.||++
T Consensus 267 --------~~~~~~~~~----------------~~~~~-~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 267 --------LKQVVEEPS----------------PQLPA-D----KFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp --------HHHHHHSCC----------------CCCCG-G----GSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --------HHHHhcCCC----------------CCCCc-c----cCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111000 00000 0 01235788999999999999999999876
No 204
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=333.58 Aligned_cols=252 Identities=27% Similarity=0.292 Sum_probs=196.7
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ..+.+.+|+.++++++||||+++++++. .....
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF-----KNTDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCEE
Confidence 3567999999999999999999998889999999997532 3477999999999999999999999963 45678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+++++|.+++.. ....+++..++.++.||+.||.||| +.+|+|+||||+||+++.++.+||+
T Consensus 100 ~lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~ 167 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRL---------RNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLA 167 (314)
T ss_dssp EEEEECCTTEEHHHHHHH---------HTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEEC
T ss_pred EEEeecCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEe
Confidence 999999999999999842 2456899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCch
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPE 397 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~ 397 (873)
|||++........ ......||..|+|||++.+..++.++||||||+++|||++|+.||........ ..
T Consensus 168 dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~-------- 235 (314)
T 3com_A 168 DFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA--IF-------- 235 (314)
T ss_dssp CCTTCEECBTTBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HH--------
T ss_pred ecccchhhhhhcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH--HH--------
Confidence 9999986543221 22234689999999999999999999999999999999999999975321100 00
Q ss_pred hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 398 RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 398 ~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.. .. .+...... .....+.+++.+||+.||++|||+.++++
T Consensus 236 ---~~~~-~~---------------~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 236 ---MIPT-NP---------------PPTFRKPE----LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ---HHHH-SC---------------CCCCSSGG----GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---HHhc-CC---------------CcccCCcc----cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0000 00 00000000 01234788999999999999999999976
No 205
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.3e-37 Score=341.52 Aligned_cols=287 Identities=18% Similarity=0.206 Sum_probs=202.9
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
..++|.+.+.||+|+||.||+|++..+++.||||+++.... .....+.+|++++++++||||+++++++....+.....
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 35789999999999999999999988999999999964332 23457889999999999999999999976544445577
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+. |+|.+++.. ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 89 ~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl 153 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST-----------QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKV 153 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEE
T ss_pred EEEEEeccC-ccHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEE
Confidence 999999997 699998842 35889999999999999999999 889999999999999999999999
Q ss_pred eccccccccccccccc--------cccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhh
Q 002857 317 ADFGIARFLEATNEQT--------SSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 387 (873)
Q Consensus 317 sDFGla~~~~~~~~~~--------~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l 387 (873)
+|||+++......... ......||..|+|||++.+ ..++.++||||||+++|||++|+.||........ +
T Consensus 154 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~ 232 (353)
T 2b9h_A 154 CDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-L 232 (353)
T ss_dssp CCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-H
T ss_pred EecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-H
Confidence 9999998764322111 1223468999999998654 6789999999999999999999999976422111 1
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.......-.......... ......+.........+... ...........+.+++.+||+.||++|||+.||++
T Consensus 233 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 233 LLIFGIIGTPHSDNDLRC--IESPRAREYIKSLPMYPAAP-LEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHHHHHCCCCSTTTTTT--CCCHHHHHHHHTSCCCCCCC-HHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhCCCchhccccc--cccchhhHHhhcccCCCCcc-hhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 110000000000000000 00000000001110111100 01111122345789999999999999999999865
No 206
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=8.3e-38 Score=351.45 Aligned_cols=248 Identities=23% Similarity=0.268 Sum_probs=189.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHH-HHhhhhccceeeeeeeecccccCC
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEV-MRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~i-L~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
.++|++.+.||+|+||.||+|++..+++.||||+++... ......+..|..+ ++.++||||+++++++ ...
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~-----~~~ 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTA 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEE-----ECS
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EeC
Confidence 357899999999999999999999999999999997543 2233456677776 5678999999999985 456
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..++||||+++|+|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++++
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~i 178 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQR----------ERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHI 178 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCE
Confidence 789999999999999999842 345888899999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 179 kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---------- 246 (373)
T 2r5t_A 179 VLTDFGLCKENIEHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---------- 246 (373)
T ss_dssp EECCCCBCGGGBCCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH----------
T ss_pred EEeeCccccccccCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH----------
Confidence 999999998643222 22334569999999999999999999999999999999999999996532111
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
....++...+. .+. .....+.+++.+||+.||++||++.+.+
T Consensus 247 ---~~~~i~~~~~~--------------~~~---------~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 247 ---MYDNILNKPLQ--------------LKP---------NITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp ---HHHHHHHSCCC--------------CCS---------SSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred ---HHHHHHhcccC--------------CCC---------CCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 01111111000 000 0122477899999999999999986443
No 207
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.7e-37 Score=339.32 Aligned_cols=293 Identities=21% Similarity=0.224 Sum_probs=194.7
Q ss_pred HHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccc-
Q 002857 153 EALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY- 231 (873)
Q Consensus 153 ~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~- 231 (873)
.......++|++.+.||+|+||.||+|++..+++.||||++.... .....+.++++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455667789999999999999999999998899999999986433 333567888999999999999999999754321
Q ss_pred -cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 232 -QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 232 -~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
......++||||+++ +|.+.+.. .......+++..+..++.||+.||.|||.. +.+|+||||||+|||++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~ 166 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRN------YYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNE 166 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHH------HHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEET
T ss_pred cccceeEEEEeecccc-cHHHHHHH------HhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeC
Confidence 123347899999976 55554421 113456788999999999999999999943 689999999999999996
Q ss_pred -CCCeEEeccccccccccccccccccccccccccCCCcccCCCC-CCcchhhHhHHHHHHHHHhCCCCCCcccccchhhH
Q 002857 311 -EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE-TSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 311 -~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~ 388 (873)
++.+||+|||+++....... .....||..|+|||++.+.. ++.++||||||+++|||+||+.||....... .+.
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~ 242 (360)
T 3e3p_A 167 ADGTLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLH 242 (360)
T ss_dssp TTTEEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHH
T ss_pred CCCcEEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHH
Confidence 89999999999987654322 22345899999999987654 8999999999999999999999997632221 111
Q ss_pred HHHhhcCc--hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 389 NWVQSALP--ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 389 ~~~~~~~~--~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
........ ......+++..... ........++..............+.+|+.+||+.||++|||+.||++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 243 EIVRVLGCPSREVLRKLNPSHTDV-----DLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHHCCCCHHHHHHHCTTCCCG-----GGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHcCCCCHHHHHhcccchhhc-----cccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111110 01111111100000 000000000000000000012346889999999999999999998864
No 208
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.4e-36 Score=339.98 Aligned_cols=203 Identities=24% Similarity=0.248 Sum_probs=164.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeeccc-ccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVD-YQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~-~~~~~ 235 (873)
.++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999998899999999997432 223467889999999999999999999975322 12234
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++ +|.+++. ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 104 ~~~lv~e~~~~-~l~~~~~------------~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~k 167 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 167 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH------------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEE
T ss_pred ceEEEEEcCCC-CHHHHHh------------hccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEE
Confidence 78999999974 7888773 23788899999999999999999 88999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|+|||+++...... ......||..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 168 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 168 ILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp ECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEEeeccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999998654321 122356899999999999999999999999999999999999999763
No 209
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7e-37 Score=329.49 Aligned_cols=202 Identities=24% Similarity=0.336 Sum_probs=170.9
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++ ...+..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEE-----ecCCce
Confidence 57899999999999999999998899999999986432 22346789999999999999999999996 345678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEe
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVA 317 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLs 317 (873)
++||||+. ++|.+++.. .....+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 78 ~lv~e~~~-~~L~~~~~~--------~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~ 145 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDA--------SALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLA 145 (299)
T ss_dssp EEEEECCS-EEHHHHHHH--------TTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred EEEEEccc-CCHHHHHHh--------hhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEEC
Confidence 99999997 699999853 23356889999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCCC-CCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHE-TSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|||+++....... ......+|..|+|||++.+.. ++.++||||||+++|||+||+.||...
T Consensus 146 dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 146 DFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp STTHHHHHCCCSB--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cchhhhhccCCcc--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 9999986543221 122345899999999988765 799999999999999999999999763
No 210
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.4e-37 Score=346.53 Aligned_cols=281 Identities=17% Similarity=0.229 Sum_probs=187.4
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhhccceeeeeeeecc-cccCC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIHRKIIKVVTACSRV-DYQGN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~-~~~~~ 234 (873)
..++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|+++|+.++||||+++++++... .....
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 35789999999999999999999999999999999864322 2346788999999999999999999987532 11233
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++|+||+ +++|.+++. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~ 171 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVK-----------CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 171 (367)
T ss_dssp CCCEEEEECC-CEECC----------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCE
T ss_pred CeEEEEeccc-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCE
Confidence 5679999999 789999883 245899999999999999999999 8999999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+..
T Consensus 172 kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~l~~i~~ 244 (367)
T 2fst_X 172 KILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--DQLKLILR 244 (367)
T ss_dssp EECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHH
T ss_pred EEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHH
Confidence 99999999865322 233568999999999887 67899999999999999999999999763221 11111111
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+.....+.+....... .+.....+...+.... ..........+.+|+.+||+.||++|||+.|+++
T Consensus 245 ~~g~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 245 LVGTPGAELLKKISSES--ARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHCSCCHHHHTTCCCHH--HHHHHHTSCCCCCCCH-HHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCCHHHHHHhhhHH--HHHHHhccCCCCCCCH-HHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 11110111111110000 0000111111111100 1111112335789999999999999999998865
No 211
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.3e-38 Score=336.54 Aligned_cols=259 Identities=24% Similarity=0.335 Sum_probs=193.2
Q ss_pred hcCCCcceeecccCceEEEEEEEcC-CCc--EEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeeccccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFE-GAP--AVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~-~g~--~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~ 232 (873)
.++|++.+.||+|+||.||+|++.. +++ .||||+++.. .....+.+.+|++++++++||||+++++++.
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 91 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL----- 91 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc-----
Confidence 3578999999999999999998643 333 6899998643 2234567899999999999999999999963
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
. ...++||||+++|+|.+++.. ....+++..++.++.||+.||.||| +.+|+||||||+|||++.++
T Consensus 92 ~-~~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~ 158 (291)
T 1u46_A 92 T-PPMKMVTELAPLGSLLDRLRK---------HQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRD 158 (291)
T ss_dssp S-SSCEEEEECCTTCBHHHHHHH---------HGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETT
T ss_pred c-CCceeeEecccCCCHHHHHHh---------ccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCC
Confidence 2 237899999999999999853 1245889999999999999999999 88999999999999999999
Q ss_pred CeEEeccccccccccccccc-cccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHH
Q 002857 313 TACVADFGIARFLEATNEQT-SSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~ 390 (873)
.+||+|||+++......... ......+|..|+|||++.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~-- 234 (291)
T 1u46_A 159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--IL-- 234 (291)
T ss_dssp EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HH--
T ss_pred CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH--HH--
Confidence 99999999998764433211 1223457888999999988889999999999999999999 999997532111 00
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIK 469 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~ 469 (873)
..+.. .. ...+... .+...+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 235 ---------~~~~~----~~----------~~~~~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 235 ---------HKIDK----EG----------ERLPRPE-------DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp ---------HHHHT----SC----------CCCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ---------HHHHc----cC----------CCCCCCc-------CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 00000 00 0000000 11235788999999999999999999999998764
No 212
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.7e-37 Score=331.50 Aligned_cols=253 Identities=22% Similarity=0.311 Sum_probs=199.6
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---------cchhHHHHHHHHHHhhh-hccceeeeeeee
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---------DASKSFTVECEVMRNII-HRKIIKVVTACS 227 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---------~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~ 227 (873)
..++|.+.+.||+|+||.||+|.+..+++.||||+++.... ...+.+.+|+++++++. ||||+++++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~- 93 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY- 93 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE-
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee-
Confidence 45789999999999999999999998999999999975431 12356889999999995 99999999996
Q ss_pred cccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCee
Q 002857 228 RVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNIL 307 (873)
Q Consensus 228 ~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNIL 307 (873)
......++||||+++++|.+++.. ...+++..++.++.||+.||.||| +.+|+||||||+|||
T Consensus 94 ----~~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil 156 (298)
T 1phk_A 94 ----ETNTFFFLVFDLMKKGELFDYLTE----------KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENIL 156 (298)
T ss_dssp ----ECSSEEEEEEECCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred ----ccCCeEEEEEeccCCCcHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEE
Confidence 456789999999999999999942 346899999999999999999999 899999999999999
Q ss_pred eCCCCCeEEeccccccccccccccccccccccccccCCCcccC------CCCCCcchhhHhHHHHHHHHHhCCCCCCccc
Q 002857 308 LNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM------GHETSSYGDVYSFGILLLEMFTGLRPSDDMF 381 (873)
Q Consensus 308 Ld~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~------~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~ 381 (873)
++.++.+||+|||++........ .....++..|+|||++. ...++.++||||||+++|||++|+.||....
T Consensus 157 ~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 157 LDDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp ECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EcCCCcEEEecccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 99999999999999986643321 22345899999999874 4568899999999999999999999996532
Q ss_pred ccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHH
Q 002857 382 KDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDV 461 (873)
Q Consensus 382 ~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EV 461 (873)
... .. ..+....... +. ... ......+.+++.+||+.||++|||+.|+
T Consensus 234 ~~~--~~-----------~~~~~~~~~~--------------~~-~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l 281 (298)
T 1phk_A 234 QML--ML-----------RMIMSGNYQF--------------GS-PEW----DDYSDTVKDLVSRFLVVQPQKRYTAEEA 281 (298)
T ss_dssp HHH--HH-----------HHHHHTCCCC--------------CT-TTG----GGSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred HHH--HH-----------HHHhcCCccc--------------Cc-ccc----cccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 110 00 0111100000 00 000 0112357899999999999999999988
Q ss_pred HH
Q 002857 462 EL 463 (873)
Q Consensus 462 l~ 463 (873)
++
T Consensus 282 l~ 283 (298)
T 1phk_A 282 LA 283 (298)
T ss_dssp TT
T ss_pred Hh
Confidence 64
No 213
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=346.24 Aligned_cols=256 Identities=22% Similarity=0.293 Sum_probs=197.6
Q ss_pred hcCCCcceeecccCceEEEEEEEc---CCCcEEEEEEeeccC----CcchhHHHHHHHHHHhh-hhccceeeeeeeeccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILF---EGAPAVAIKVFNFLH----HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVD 230 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~---~~g~~VAVK~l~~~~----~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~ 230 (873)
.++|.+.+.||+|+||.||+|+.. .+++.||||+++... ....+.+.+|+++|+++ +|+||+++++++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~---- 128 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF---- 128 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE----
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE----
Confidence 357999999999999999999884 478999999986432 23346678899999999 599999999986
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
......+|||||+++|+|.+++.. ...+++..++.++.||+.||.||| +.+|+||||||+|||++.
T Consensus 129 -~~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~ 194 (355)
T 1vzo_A 129 -QTETKLHLILDYINGGELFTHLSQ----------RERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDS 194 (355)
T ss_dssp -EETTEEEEEECCCCSCBHHHHHHH----------HSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECT
T ss_pred -eeCceEEEEeecCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECC
Confidence 445678999999999999999953 245889999999999999999999 889999999999999999
Q ss_pred CCCeEEeccccccccccccccccccccccccccCCCcccCCC--CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhH
Q 002857 311 EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH--ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQ 388 (873)
Q Consensus 311 ~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~ 388 (873)
++.+||+|||+++.+..... .......||..|+|||++.+. .++.++||||||+++|||+||+.||........
T Consensus 195 ~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--- 270 (355)
T 1vzo_A 195 NGHVVLTDFGLSKEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--- 270 (355)
T ss_dssp TSCEEESCSSEEEECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC---
T ss_pred CCcEEEeeCCCCeecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch---
Confidence 99999999999986543222 222345699999999998863 578999999999999999999999975321110
Q ss_pred HHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-----CHHHHHH
Q 002857 389 NWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-----KINDVEL 463 (873)
Q Consensus 389 ~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-----Tm~EVl~ 463 (873)
..++....+... .+... +....+.+|+.+||+.||++|| |+.|+++
T Consensus 271 ----------~~~~~~~~~~~~------------~~~~~-------~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 271 ----------QAEISRRILKSE------------PPYPQ-------EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp ----------HHHHHHHHHHCC------------CCCCT-------TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred ----------HHHHHHHHhccC------------CCCCc-------ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 011111111100 00000 0123477899999999999999 8998876
Q ss_pred HH
Q 002857 464 GL 465 (873)
Q Consensus 464 ~L 465 (873)
..
T Consensus 322 h~ 323 (355)
T 1vzo_A 322 HL 323 (355)
T ss_dssp SG
T ss_pred Cc
Confidence 43
No 214
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.5e-37 Score=364.92 Aligned_cols=204 Identities=25% Similarity=0.347 Sum_probs=178.2
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
..++|.+.+.||+|+||.||+|++..+++.||||++... .......+.+|+++|++++||||+++++++ ...
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~ 256 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETK 256 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE-----eeC
Confidence 346799999999999999999999999999999999643 223446788999999999999999999985 456
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..+|||||+++|+|.+++.. .....+++..++.++.||+.||+||| +.+|+||||||+|||++.++++
T Consensus 257 ~~l~lVmEy~~gg~L~~~l~~--------~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~v 325 (576)
T 2acx_A 257 DALCLVLTLMNGGDLKFHIYH--------MGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHI 325 (576)
T ss_dssp SEEEEEECCCCSCBHHHHHHS--------SSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCcHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCe
Confidence 789999999999999999853 22345899999999999999999999 8899999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 326 KL~DFGla~~~~~~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~ 388 (576)
T 2acx_A 326 RISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388 (576)
T ss_dssp EECCCTTCEECCTTC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred EEEecccceecccCc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 999999998764332 122346999999999999999999999999999999999999999763
No 215
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9.9e-38 Score=348.74 Aligned_cols=267 Identities=8% Similarity=0.005 Sum_probs=184.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhh--hhccceeeeeee-------
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNI--IHRKIIKVVTAC------- 226 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L--~HpNIV~llg~c------- 226 (873)
..+|.+.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.+++.+ +||||++++..+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 3458899999999999999999998999999999986443 2345678887666666 599988855322
Q ss_pred ecccc------------cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhh------HHHHHHHHHHHHHH
Q 002857 227 SRVDY------------QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLER------LNIAIDVASALEYL 288 (873)
Q Consensus 227 ~~~~~------------~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~------l~Ia~qIa~gL~yL 288 (873)
..... ......+|||||++ |+|.+++... ...+.+..+ +.|+.||+.||+||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---------~~~~~~~~~~~~~vk~~i~~qi~~aL~~L 210 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---------DFVYVFRGDEGILALHILTAQLIRLAANL 210 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---------HHSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---------ccccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 11000 00144899999998 8999999631 223455566 78889999999999
Q ss_pred hhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCC--CCCCcchhhHhHHHH
Q 002857 289 HLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG--HETSSYGDVYSFGIL 366 (873)
Q Consensus 289 H~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSfGvv 366 (873)
| +.+|+||||||+|||++.++.+||+|||+++..... .....+|..|+|||++.+ ..++.++|||||||+
T Consensus 211 H---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~i 282 (371)
T 3q60_A 211 Q---SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLS 282 (371)
T ss_dssp H---HTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHH
T ss_pred H---HCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHH
Confidence 9 899999999999999999999999999999865321 113457799999999987 679999999999999
Q ss_pred HHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHH
Q 002857 367 LLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVA 446 (873)
Q Consensus 367 L~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~ 446 (873)
+|||+||+.||.......... +.... ...... ... ..+... .+...+.+|+.+
T Consensus 283 l~elltg~~Pf~~~~~~~~~~--~~~~~----~~~~~~----~~~----------~~~~~~-------~~~~~~~~li~~ 335 (371)
T 3q60_A 283 IYRVWCLFLPFGLVTPGIKGS--WKRPS----LRVPGT----DSL----------AFGSCT-------PLPDFVKTLIGR 335 (371)
T ss_dssp HHHHHHSSCSTTBCCTTCTTC--CCBCC----TTSCCC----CSC----------CCTTSS-------CCCHHHHHHHHH
T ss_pred HHHHHhCCCCCCCcCcccccc--hhhhh----hhhccc----ccc----------chhhcc-------CCCHHHHHHHHH
Confidence 999999999997642221100 00000 000000 000 000000 112347889999
Q ss_pred hhccCcCCCCCHHHHHH--HHHHHHH
Q 002857 447 CSAELPGERMKINDVEL--GLRLIKK 470 (873)
Q Consensus 447 CL~~dP~eRPTm~EVl~--~Le~i~~ 470 (873)
||+.||++|||+.|+++ .++.+..
T Consensus 336 ~L~~dP~~Rpt~~e~l~hp~f~~~~~ 361 (371)
T 3q60_A 336 FLNFDRRRRLLPLEAMETPEFLQLQN 361 (371)
T ss_dssp HTCSSTTTCCCHHHHTTSHHHHHHHH
T ss_pred HcCCChhhCCCHHHHhcCHHHHHHHH
Confidence 99999999999999974 3444433
No 216
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.2e-37 Score=355.91 Aligned_cols=252 Identities=23% Similarity=0.332 Sum_probs=201.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|.+.++||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++ ....
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~ 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF-----EDKG 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence 457899999999999999999999899999999986432 33457799999999999999999999996 4567
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee---CCCC
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL---NDEM 312 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL---d~~~ 312 (873)
..++||||+.+|+|.+++. ....+++..++.|+.||+.||+||| +.+|+||||||+|||+ +.++
T Consensus 100 ~~~lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~ 166 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEII----------SRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDA 166 (484)
T ss_dssp EEEEEECCCCSCBHHHHHH----------TCSCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTC
T ss_pred EEEEEEecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCC
Confidence 8999999999999999884 2456899999999999999999999 8899999999999999 5678
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
.+||+|||+++.+.... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||....... ..
T Consensus 167 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~---- 236 (484)
T 3nyv_A 167 NIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD--IL---- 236 (484)
T ss_dssp CEEECCTTHHHHBCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH----
T ss_pred cEEEEeeeeeEEccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH--HH----
Confidence 99999999998764432 2233569999999999876 68999999999999999999999997632111 11
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+....+... ..... .....+.+++.+||+.+|++|||+.|+++.
T Consensus 237 -------~~i~~~~~~~~---------------~~~~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 237 -------KKVEKGKYTFE---------------LPQWK----KVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp -------HHHHHCCCCCC---------------SGGGG----GSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -------HHHHcCCCCCC---------------Ccccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 11111000000 00000 112347789999999999999999999863
No 217
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.5e-36 Score=331.21 Aligned_cols=199 Identities=22% Similarity=0.332 Sum_probs=171.0
Q ss_pred hcCCCcceeecccCceEEEEEEE-cCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc------ceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGIL-FEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK------IIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~-~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN------IV~llg~c~~~~~ 231 (873)
.++|++.+.||+|+||.||+|.+ ..+++.||||+++.. ....+.+.+|+++++.++|+| ++++++++
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~----- 86 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF----- 86 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE-----
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc-----
Confidence 46899999999999999999998 457889999998643 233467899999999998876 89999985
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND- 310 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~- 310 (873)
...+..++||||+ +++|.+++.. .....+++..++.|+.||+.||+||| +.+|+||||||+|||++.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~--------~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~ 154 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKE--------NGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQS 154 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHH--------TTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCC
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHh--------cCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEecc
Confidence 4456899999999 8899999853 23346889999999999999999999 889999999999999987
Q ss_pred ------------------CCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh
Q 002857 311 ------------------EMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT 372 (873)
Q Consensus 311 ------------------~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT 372 (873)
++.+||+|||+++..... .....||..|+|||++.+..++.++||||||+++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 229 (339)
T 1z57_A 155 DYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229 (339)
T ss_dssp CEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHH
T ss_pred ccccccCCccccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHh
Confidence 678999999999864322 223468999999999999999999999999999999999
Q ss_pred CCCCCCcc
Q 002857 373 GLRPSDDM 380 (873)
Q Consensus 373 Gk~Pf~~~ 380 (873)
|+.||...
T Consensus 230 g~~pf~~~ 237 (339)
T 1z57_A 230 GFTVFPTH 237 (339)
T ss_dssp SSCSCCCS
T ss_pred CCCCCCCC
Confidence 99999763
No 218
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.6e-37 Score=355.44 Aligned_cols=252 Identities=22% Similarity=0.289 Sum_probs=198.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc--CCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL--HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~--~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|.+.++||+|+||.||+|++..+++.||||++... .......+.+|+++|++++||||+++++++ .....
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~ 95 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDSSS 95 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEE-----EcCCE
Confidence 45799999999999999999999889999999998632 233457799999999999999999999996 45678
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC---CCCC
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN---DEMT 313 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd---~~~~ 313 (873)
.++||||+.+|+|.+++.. ...+++..++.|+.||+.||.||| +.+|+||||||+|||++ .++.
T Consensus 96 ~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~ 162 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIK----------RKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCD 162 (486)
T ss_dssp EEEEECCCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCC
T ss_pred EEEEEEcCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCC
Confidence 9999999999999998842 346899999999999999999999 89999999999999995 5568
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||....... +.
T Consensus 163 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~----- 231 (486)
T 3mwu_A 163 IKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--IL----- 231 (486)
T ss_dssp EEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH-----
T ss_pred EEEEECCcCeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH-----
Confidence 9999999998664332 2223469999999999876 58999999999999999999999996532111 00
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+........ ..... .....+.+++.+||+.||++|||+.|+++.
T Consensus 232 ------~~i~~~~~~~~---------------~~~~~----~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 232 ------KRVETGKYAFD---------------LPQWR----TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ------HHHHHTCCCSC---------------SGGGG----GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ------HHHHhCCCCCC---------------CcccC----CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11111000000 00000 112347789999999999999999999863
No 219
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=7.9e-37 Score=355.94 Aligned_cols=252 Identities=23% Similarity=0.307 Sum_probs=197.7
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-------------cchhHHHHHHHHHHhhhhccceeeee
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-------------DASKSFTVECEVMRNIIHRKIIKVVT 224 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-------------~~~~~f~~Ei~iL~~L~HpNIV~llg 224 (873)
..++|.+.++||+|+||.||+|++..+++.||||++..... ...+.+.+|+.+|++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 35789999999999999999999999999999999874321 23467899999999999999999999
Q ss_pred eeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 002857 225 ACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPS 304 (873)
Q Consensus 225 ~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKps 304 (873)
++ ......+|||||+++|+|.+++.. ...+++..++.|+.||+.||+||| +.+|+||||||+
T Consensus 114 ~~-----~~~~~~~lv~e~~~gg~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~ 175 (504)
T 3q5i_A 114 VF-----EDKKYFYLVTEFYEGGELFEQIIN----------RHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPE 175 (504)
T ss_dssp EE-----ECSSEEEEEEECCTTCBHHHHHHH----------HSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGG
T ss_pred EE-----EcCCEEEEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHH
Confidence 96 456789999999999999998842 345899999999999999999999 899999999999
Q ss_pred CeeeCCCC---CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccc
Q 002857 305 NILLNDEM---TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMF 381 (873)
Q Consensus 305 NILLd~~~---~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~ 381 (873)
|||++.++ .+||+|||+++...... ......||+.|+|||++. ..++.++|||||||++|+|++|..||....
T Consensus 176 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 251 (504)
T 3q5i_A 176 NILLENKNSLLNIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251 (504)
T ss_dssp GEEESSTTCCSSEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEEecCCCCccEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99998765 69999999998764432 222346999999999987 468999999999999999999999997632
Q ss_pred ccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHH
Q 002857 382 KDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDV 461 (873)
Q Consensus 382 ~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EV 461 (873)
... +. ..+....+.... .........+.+++.+||+.||++|||+.|+
T Consensus 252 ~~~--~~-----------~~i~~~~~~~~~-------------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~ 299 (504)
T 3q5i_A 252 DQD--II-----------KKVEKGKYYFDF-------------------NDWKNISDEAKELIKLMLTYDYNKRCTAEEA 299 (504)
T ss_dssp HHH--HH-----------HHHHHCCCCCCH-------------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHH--HH-----------HHHHcCCCCCCc-------------------cccCCCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 111 11 111110000000 0000112357889999999999999999998
Q ss_pred HH
Q 002857 462 EL 463 (873)
Q Consensus 462 l~ 463 (873)
++
T Consensus 300 l~ 301 (504)
T 3q5i_A 300 LN 301 (504)
T ss_dssp HT
T ss_pred hc
Confidence 75
No 220
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.1e-37 Score=338.12 Aligned_cols=270 Identities=19% Similarity=0.220 Sum_probs=200.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcc---h--------------hHHHHHHHHHHhhhhcccee
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDA---S--------------KSFTVECEVMRNIIHRKIIK 221 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~---~--------------~~f~~Ei~iL~~L~HpNIV~ 221 (873)
.++|.+.+.||+|+||.||+|.+ +++.||||++....... . +.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999999988 88999999987432111 1 78999999999999999999
Q ss_pred eeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC-CCeeecc
Q 002857 222 VVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK-PPIAHCD 300 (873)
Q Consensus 222 llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s-~gIvHrD 300 (873)
+++++ ...+..++||||+++|+|.+++..... ........+++..++.|+.||+.||.||| + .+|+|||
T Consensus 108 ~~~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~~--l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~d 177 (348)
T 2pml_X 108 CEGII-----TNYDEVYIIYEYMENDSILKFDEYFFV--LDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRD 177 (348)
T ss_dssp CSEEE-----ESSSEEEEEEECCTTCBSSEESSSEES--SCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCC
T ss_pred EEEEE-----eeCCeEEEEEeccCCCcHHHHHHHhhh--hhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecC
Confidence 99996 445689999999999999999421000 00122567999999999999999999999 6 8999999
Q ss_pred CCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCC-CCCc-chhhHhHHHHHHHHHhCCCCCC
Q 002857 301 IKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSS-YGDVYSFGILLLEMFTGLRPSD 378 (873)
Q Consensus 301 LKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~-ksDVwSfGvvL~ELlTGk~Pf~ 378 (873)
|||+|||++.++.+||+|||++...... ......||..|+|||++.+. .++. ++||||||+++|||++|+.||.
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 253 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CChHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999865432 22335689999999999887 6666 9999999999999999999997
Q ss_pred cccccchhhHHHHhhcCch---hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCC
Q 002857 379 DMFKDNLNLQNWVQSALPE---RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGER 455 (873)
Q Consensus 379 ~~~~~~~~l~~~~~~~~~~---~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eR 455 (873)
...... .+...+...... ............ ............+.+++.+||+.||++|
T Consensus 254 ~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~l~~li~~~L~~dP~~R 314 (348)
T 2pml_X 254 LKISLV-ELFNNIRTKNIEYPLDRNHFLYPLTNK------------------KSTCSNNFLSNEDIDFLKLFLRKNPAER 314 (348)
T ss_dssp CSSCSH-HHHHHHTSCCCCCCCSSSSSTTTTCC--------------------------CCCHHHHHHHHHHCCSSGGGS
T ss_pred CCCcHH-HHHHHHhccCcCCccchhhhhcccccc------------------ccccchhhcCHHHHHHHHHHccCChhhC
Confidence 633211 111111110000 000000000000 0000001123357899999999999999
Q ss_pred CCHHHHHH
Q 002857 456 MKINDVEL 463 (873)
Q Consensus 456 PTm~EVl~ 463 (873)
||+.|+++
T Consensus 315 ps~~e~l~ 322 (348)
T 2pml_X 315 ITSEDALK 322 (348)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhc
Confidence 99999875
No 221
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.3e-37 Score=356.53 Aligned_cols=252 Identities=21% Similarity=0.263 Sum_probs=195.4
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|.+.+.||+|+||.||+|++..++..||||++.... ......+.+|+.++++++||||+++++++ .....
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF-----EDKRN 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCE
Confidence 456899999999999999999999899999999987443 33457799999999999999999999996 45677
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC---CCC
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND---EMT 313 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~---~~~ 313 (873)
.++||||+++|+|.+++.. ...+++..++.|+.||+.||+||| +.+|+||||||+|||++. ++.
T Consensus 111 ~~lv~e~~~~g~L~~~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~ 177 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIH----------RMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDAL 177 (494)
T ss_dssp EEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCc
Confidence 9999999999999998842 345889999999999999999999 899999999999999975 456
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+||+|||+++...... ......||+.|+|||++. ..++.++|||||||++|+|++|..||....... +.
T Consensus 178 ~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~----- 246 (494)
T 3lij_A 178 IKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE--IL----- 246 (494)
T ss_dssp EEECCCTTCEECBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH-----
T ss_pred EEEEECCCCeECCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH--HH-----
Confidence 9999999998764432 223356999999999886 469999999999999999999999997632211 00
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
..+....... ...... .....+.+++.+||+.||++|||+.|+++.
T Consensus 247 ------~~i~~~~~~~---------------~~~~~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 247 ------RKVEKGKYTF---------------DSPEWK----NVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp ------HHHHHTCCCC---------------CSGGGT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ------HHHHhCCCCC---------------Cchhcc----cCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1111100000 000000 112347789999999999999999999853
No 222
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.4e-36 Score=347.23 Aligned_cols=199 Identities=23% Similarity=0.308 Sum_probs=171.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh------hccceeeeeeeeccccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII------HRKIIKVVTACSRVDYQ 232 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~------HpNIV~llg~c~~~~~~ 232 (873)
..+|++.++||+|+||.||+|.+..+++.||||+++.. ......+.+|+++++.++ |+||+++++++ .
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~-----~ 169 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF-----T 169 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE-----E
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeec-----c
Confidence 46799999999999999999999999999999999743 223467888999999884 66999999986 3
Q ss_pred CCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC
Q 002857 233 GNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM 312 (873)
Q Consensus 233 ~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~ 312 (873)
.....++||||+. ++|.+++.. .....+++..++.|+.||+.||+||| +.+|+||||||+|||++.++
T Consensus 170 ~~~~~~lv~e~~~-~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~ 237 (429)
T 3kvw_A 170 FRNHICMTFELLS-MNLYELIKK--------NKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQG 237 (429)
T ss_dssp ETTEEEEEECCCC-CBHHHHHHH--------TTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTT
T ss_pred cCCeEEEEEeccC-CCHHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCC
Confidence 4567999999996 699999853 23345899999999999999999999 88999999999999999988
Q ss_pred C--eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 313 T--ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 313 ~--vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
. +||+|||+++..... .....||..|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 238 ~~~vkL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 238 RSGIKVIDFGSSCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp SCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcceEEeecccceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 7 999999999754321 22346899999999999999999999999999999999999999764
No 223
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3e-37 Score=335.70 Aligned_cols=261 Identities=22% Similarity=0.328 Sum_probs=194.0
Q ss_pred cCHHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--cchhHHHHHHHHHHhhhh--ccceeeeee
Q 002857 150 VSYEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--DASKSFTVECEVMRNIIH--RKIIKVVTA 225 (873)
Q Consensus 150 ~s~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--~~~~~f~~Ei~iL~~L~H--pNIV~llg~ 225 (873)
+.++.+....++|++.+.||+|+||.||++.+. +++.||||++..... ...+.+.+|++++.+++| +||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 96 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence 344444455678999999999999999999874 588999999974432 344678999999999974 999999998
Q ss_pred eecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCC
Q 002857 226 CSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSN 305 (873)
Q Consensus 226 c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsN 305 (873)
+ ......++||| +.+++|.+++.. ...+++..++.|+.||+.||.||| +.+|+||||||+|
T Consensus 97 ~-----~~~~~~~lv~e-~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~N 157 (313)
T 3cek_A 97 E-----ITDQYIYMVME-CGNIDLNSWLKK----------KKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPAN 157 (313)
T ss_dssp E-----ECSSEEEEEEC-CCSEEHHHHHHH----------CSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGG
T ss_pred e-----ecCCEEEEEEe-cCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCccc
Confidence 6 44567999999 568899999942 346889999999999999999999 8899999999999
Q ss_pred eeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCC-----------CCCCcchhhHhHHHHHHHHHhCC
Q 002857 306 ILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-----------HETSSYGDVYSFGILLLEMFTGL 374 (873)
Q Consensus 306 ILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----------~~~s~ksDVwSfGvvL~ELlTGk 374 (873)
||+++ +.+||+|||+++...............||..|+|||++.+ ..++.++||||||+++|||++|+
T Consensus 158 Il~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 236 (313)
T 3cek_A 158 FLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236 (313)
T ss_dssp EEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSS
T ss_pred EEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCC
Confidence 99965 8999999999987654333222334568999999999875 46888999999999999999999
Q ss_pred CCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCC
Q 002857 375 RPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGE 454 (873)
Q Consensus 375 ~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~e 454 (873)
.||........ .+..+++...... .+.. ....+.+++.+||+.||++
T Consensus 237 ~pf~~~~~~~~------------~~~~~~~~~~~~~------------~~~~---------~~~~l~~li~~~l~~dp~~ 283 (313)
T 3cek_A 237 TPFQQIINQIS------------KLHAIIDPNHEIE------------FPDI---------PEKDLQDVLKCCLKRDPKQ 283 (313)
T ss_dssp CTTTTCCSHHH------------HHHHHHCTTSCCC------------CCCC---------SCHHHHHHHHHHTCSSTTT
T ss_pred CchhhHHHHHH------------HHHHHHhcccccC------------Cccc---------chHHHHHHHHHHccCCccc
Confidence 99965322111 1111111111000 0000 0124778999999999999
Q ss_pred CCCHHHHHHH
Q 002857 455 RMKINDVELG 464 (873)
Q Consensus 455 RPTm~EVl~~ 464 (873)
|||+.||++.
T Consensus 284 Rps~~ell~h 293 (313)
T 3cek_A 284 RISIPELLAH 293 (313)
T ss_dssp SCCHHHHHTS
T ss_pred CcCHHHHhcC
Confidence 9999998764
No 224
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=7.5e-37 Score=328.23 Aligned_cols=258 Identities=21% Similarity=0.275 Sum_probs=190.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeeccc--------
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVD-------- 230 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~-------- 230 (873)
.++|++.+.||+|+||.||+|++..+++.||||++... ....+.+.+|+.++++++||||+++++++....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 46789999999999999999999889999999998643 233467899999999999999999999875321
Q ss_pred ccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC
Q 002857 231 YQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND 310 (873)
Q Consensus 231 ~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~ 310 (873)
.......++||||+++|+|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~ 151 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHS---------ENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDE 151 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHH---------SCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECT
T ss_pred cccCCceEEEEecCCCCCHHHhhhc---------cccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcC
Confidence 1234678999999999999999953 2345778899999999999999999 889999999999999999
Q ss_pred CCCeEEeccccccccccccc------------cccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCC
Q 002857 311 EMTACVADFGIARFLEATNE------------QTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPS 377 (873)
Q Consensus 311 ~~~vKLsDFGla~~~~~~~~------------~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf 377 (873)
++.+||+|||+++....... ........||..|+|||++.+. .++.++||||||+++|||++ ||
T Consensus 152 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~ 228 (303)
T 1zy4_A 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PF 228 (303)
T ss_dssp TSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CC
T ss_pred CCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---cc
Confidence 99999999999986543210 1112234589999999998765 68999999999999999998 55
Q ss_pred CcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCC
Q 002857 378 DDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMK 457 (873)
Q Consensus 378 ~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPT 457 (873)
....... ... ..+..... ..|... .......+.+++.+||+.||++|||
T Consensus 229 ~~~~~~~-~~~-----------~~~~~~~~--------------~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps 277 (303)
T 1zy4_A 229 STGMERV-NIL-----------KKLRSVSI--------------EFPPDF-----DDNKMKVEKKIIRLLIDHDPNKRPG 277 (303)
T ss_dssp SSHHHHH-HHH-----------HHHHSTTC--------------CCCTTC-----CTTTSHHHHHHHHHHTCSSGGGSCC
T ss_pred CCchhHH-HHH-----------Hhcccccc--------------ccCccc-----cccchHHHHHHHHHHHhcCcccCcC
Confidence 4311110 000 00000000 000000 0011234778999999999999999
Q ss_pred HHHHHH
Q 002857 458 INDVEL 463 (873)
Q Consensus 458 m~EVl~ 463 (873)
+.|+++
T Consensus 278 ~~~ll~ 283 (303)
T 1zy4_A 278 ARTLLN 283 (303)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 999875
No 225
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.7e-36 Score=339.14 Aligned_cols=280 Identities=20% Similarity=0.233 Sum_probs=197.3
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhhhccceeeeeeeeccccc-CC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQ-GN 234 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~-~~ 234 (873)
..++|.+.+.||+|+||.||+|.+..+++.||||++...... ..+.+.+|+.++++++||||+++++++...... ..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 357899999999999999999999999999999999754322 246788999999999999999999997432211 11
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
...++||||+. ++|.+++. ..+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~ 183 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG------------MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCEL 183 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT------------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCE
T ss_pred eeEEEEEcccc-ccHHHHhh------------cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCE
Confidence 13499999997 68888772 23899999999999999999999 8899999999999999999999
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
||+|||+++..... .....||..|+|||++.+ ..++.++||||||+++|||++|+.||....... .+.....
T Consensus 184 kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~- 256 (371)
T 4exu_A 184 KILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK- 256 (371)
T ss_dssp EECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH-
T ss_pred EEEecCcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH-
Confidence 99999999865332 223468999999999887 678999999999999999999999997632211 1111111
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.......+.....-... .......+...+... ...........+.+|+.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 257 VTGVPGTEFVQKLNDKA--AKSYIQSLPQTPRKD-FTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHCCCCHHHHTTCSCHH--HHHHHHHSCCCCCCC-HHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhCCCcHHHHHHhhhhh--hhhhhhccCCCcchh-HHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00000001111000000 000011111111110 01111122346889999999999999999998864
No 226
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=7e-37 Score=359.60 Aligned_cols=206 Identities=25% Similarity=0.361 Sum_probs=178.4
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++|.+.++||+|+||.||+|++..+++.||||+++... ......+.+|+++|++++||||+++++++ ....
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF-----ETKT 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----eeCC
Confidence 367889999999999999999998899999999996432 23346788999999999999999999985 4567
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..+|||||+++|+|.+++... ......+++..++.++.||+.||.||| +.+|+||||||+|||++.++++|
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~------~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vk 329 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNV------DEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVR 329 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTS------STTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEEeccCCCHHHHHHHh------hcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEE
Confidence 899999999999999998531 122456899999999999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 330 L~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 330 ISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp ECCCTTCEECCTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred EeecceeeeccCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 999999987643322 223347999999999999999999999999999999999999999763
No 227
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.1e-37 Score=370.17 Aligned_cols=245 Identities=23% Similarity=0.287 Sum_probs=198.4
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc---CCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL---HHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~ 233 (873)
..++|++.++||+|+||.||+|++..+++.||||+++.. .....+.+..|..+|..+ +|+||+++++++ ..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~-----~~ 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QT 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC-----BC
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEE-----Ee
Confidence 346899999999999999999999999999999999742 233456788999999988 799999999984 56
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
.+..+|||||+++|+|.++|+. ...+++..++.|+.||+.||+||| +.+||||||||+||||+.+++
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ 480 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQ----------VGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGH 480 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSC
T ss_pred CCEEEEEEeCcCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCc
Confidence 7789999999999999999953 246899999999999999999999 899999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+||+|||+++...... .......||+.|+|||++.+..++.++|||||||+||||++|+.||......
T Consensus 481 ikL~DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~---------- 548 (674)
T 3pfq_A 481 IKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---------- 548 (674)
T ss_dssp EEECCCTTCEECCCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH----------
T ss_pred EEEeecceeeccccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH----------
Confidence 9999999998543222 2233457999999999999999999999999999999999999999763211
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKI 458 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm 458 (873)
++....+.... ..|. .....+.+|+..||+.||++||++
T Consensus 549 -------~~~~~i~~~~~----------~~p~---------~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 549 -------ELFQSIMEHNV----------AYPK---------SMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp -------HHHHHHHSSCC----------CCCT---------TSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred -------HHHHHHHhCCC----------CCCc---------cCCHHHHHHHHHHccCCHHHCCCC
Confidence 11111111110 0010 012347789999999999999997
No 228
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.9e-36 Score=345.15 Aligned_cols=277 Identities=21% Similarity=0.248 Sum_probs=196.5
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccc-cCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY-QGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~-~~~~~~~ 238 (873)
.+|++.+.||+|+||.||+|++..+++.||||++.... ..+.+|+++|++++|+|||++++++..... .+....+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46888999999999999999998899999999986432 234579999999999999999998754321 1233467
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC-CCeEEe
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE-MTACVA 317 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~-~~vKLs 317 (873)
+||||+++ +|.+++... ......+++..++.++.||++||+||| +.+|+||||||+|||++.+ +.+||+
T Consensus 130 lv~e~~~~-~l~~~~~~~------~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~ 199 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHY------SRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLC 199 (420)
T ss_dssp EEEECCCE-EHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEEC
T ss_pred eehhcccc-cHHHHHHHH------hhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEec
Confidence 99999975 676666321 123467899999999999999999999 8999999999999999955 678999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+++.+..... .....||..|+|||++.+. .++.++|||||||++|||++|+.||...... ..+...+...-.
T Consensus 200 DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~ 275 (420)
T 1j1b_A 200 DFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGT 275 (420)
T ss_dssp CCTTCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCS
T ss_pred cchhhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 9999987643322 2234689999999998765 7899999999999999999999999763221 112222211111
Q ss_pred h---hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 E---RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~---~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. .+..+ ++.... + ....+..++|.... .......+.+|+.+||+.||++|||+.|+++
T Consensus 276 p~~~~~~~~-~~~~~~-~----~~p~~~~~~~~~~~---~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 276 PTREQIREM-NPNYTE-F----KFPQIKAHPWTKVF---RPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCHHHHHHH-CSCCCC-C----CCCCCCCCCHHHHS---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCHHHHHhh-Chhhhh-h----ccCccCCCCHHHhc---CCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 1 11111 000000 0 00001111110000 0011235789999999999999999998864
No 229
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=335.93 Aligned_cols=260 Identities=21% Similarity=0.263 Sum_probs=194.8
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCc
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
..++|++.+.||+|+||.||+|.+.. .||+|+++... ....+.+.+|+.++++++|+||+++++++. ...
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~ 102 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM-----SPP 102 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE-----CSS
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe-----cCC
Confidence 35688999999999999999998743 49999987432 233467889999999999999999999963 456
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+++++|.+++.. ....+++..++.|+.||+.||+||| +.+|+||||||+|||++ ++.+|
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~ 169 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRD---------AKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVV 169 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTS---------SCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCE
T ss_pred ceEEEeecccCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEE
Confidence 78999999999999999953 3346899999999999999999999 88999999999999998 67999
Q ss_pred Eecccccccccccc---ccccccccccccccCCCcccCC---------CCCCcchhhHhHHHHHHHHHhCCCCCCccccc
Q 002857 316 VADFGIARFLEATN---EQTSSIGVKGTTGYIAPEYGMG---------HETSSYGDVYSFGILLLEMFTGLRPSDDMFKD 383 (873)
Q Consensus 316 LsDFGla~~~~~~~---~~~~~~~~~Gt~~Y~APE~l~~---------~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~ 383 (873)
|+|||+++...... .........||..|+|||++.+ ..++.++||||||+++|||++|+.||.....+
T Consensus 170 l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 249 (319)
T 2y4i_B 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE 249 (319)
T ss_dssp ECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH
T ss_pred EeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999987653221 1112223458999999999874 35789999999999999999999999753221
Q ss_pred chhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 384 NLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 384 ~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.. . ..+..... .. .+.. .+...+.+++.+||+.||++|||+.+|++
T Consensus 250 ~~--~-----------~~~~~~~~-~~------------~~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 250 AI--I-----------WQMGTGMK-PN------------LSQI--------GMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp HH--H-----------HHHHTTCC-CC------------CCCS--------SCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred HH--H-----------HHhccCCC-CC------------CCcC--------CCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 10 0 00000000 00 0000 01123778999999999999999999999
Q ss_pred HHHHHHHhh
Q 002857 464 GLRLIKKKL 472 (873)
Q Consensus 464 ~Le~i~~~l 472 (873)
+|+.+....
T Consensus 296 ~l~~l~~~~ 304 (319)
T 2y4i_B 296 MLEKLPKRN 304 (319)
T ss_dssp HHTTC----
T ss_pred HHHHHHHhh
Confidence 999886654
No 230
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.9e-36 Score=336.43 Aligned_cols=203 Identities=20% Similarity=0.288 Sum_probs=169.9
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-----------hccceeeeeeee
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-----------HRKIIKVVTACS 227 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-----------HpNIV~llg~c~ 227 (873)
.++|.+.+.||+|+||.||+|++..+++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999999899999999998632 223467889999999886 899999999975
Q ss_pred cccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC-CeeeccCCCCCe
Q 002857 228 RVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP-PIAHCDIKPSNI 306 (873)
Q Consensus 228 ~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~-gIvHrDLKpsNI 306 (873)
... ......++||||+ +++|.+++.. .....+++..++.|+.||+.||+||| +. +|+||||||+||
T Consensus 97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~--------~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NI 163 (373)
T 1q8y_A 97 HKG-PNGVHVVMVFEVL-GENLLALIKK--------YEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENV 163 (373)
T ss_dssp EEE-TTEEEEEEEECCC-CEEHHHHHHH--------TTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGE
T ss_pred ccC-CCCceEEEEEecC-CCCHHHHHHH--------hhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHe
Confidence 421 2334789999999 8899999853 23445899999999999999999999 77 999999999999
Q ss_pred eeC------CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 307 LLN------DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 307 LLd------~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|++ ..+.+||+|||+++..... .....||..|+|||++.+..++.++||||||+++|||+||+.||...
T Consensus 164 ll~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 164 LMEIVDSPENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp EEEEEETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred EEeccCCCcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 994 4458999999999865432 22346899999999999999999999999999999999999999753
No 231
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.3e-36 Score=337.92 Aligned_cols=207 Identities=23% Similarity=0.270 Sum_probs=172.8
Q ss_pred HHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-hc-----cceeeeeee
Q 002857 153 EALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-HR-----KIIKVVTAC 226 (873)
Q Consensus 153 ~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-Hp-----NIV~llg~c 226 (873)
.......++|.+.+.||+|+||.||+|++..+++.||||+++.. ......+..|+.+++.++ |+ +|+++++++
T Consensus 47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~ 125 (382)
T 2vx3_A 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF 125 (382)
T ss_dssp CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence 33444578999999999999999999999989999999999732 223467788999999885 44 499999985
Q ss_pred ecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCe
Q 002857 227 SRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNI 306 (873)
Q Consensus 227 ~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNI 306 (873)
...+..+|||||+. |+|.+++.. .....+++..++.|+.||+.||.|||.. ..+|+||||||+||
T Consensus 126 -----~~~~~~~lv~e~~~-~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NI 190 (382)
T 2vx3_A 126 -----MFRNHLCLVFEMLS-YNLYDLLRN--------TNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENI 190 (382)
T ss_dssp -----EETTEEEEEEECCC-CBHHHHHHH--------TTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGE
T ss_pred -----ccCCceEEEEecCC-CCHHHHHhh--------cCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccE
Confidence 34568999999996 599999853 2334589999999999999999999932 47899999999999
Q ss_pred eeC--CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 307 LLN--DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 307 LLd--~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
|++ .++.+||+|||+++..... .....||..|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 191 ll~~~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 191 LLCNPKRSAIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EESSTTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEecCCCCcEEEEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 995 5788999999999866332 22346899999999999999999999999999999999999999763
No 232
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=6.3e-36 Score=328.74 Aligned_cols=199 Identities=21% Similarity=0.329 Sum_probs=169.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCC-cEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc------ceeeeeeeecccc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGA-PAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK------IIKVVTACSRVDY 231 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g-~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN------IV~llg~c~~~~~ 231 (873)
.++|++.+.||+|+||.||+|.+..++ +.||||+++.. ....+.+.+|+.++++++|++ ++.+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~----- 91 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF----- 91 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE-----
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee-----
Confidence 468999999999999999999987666 78999999743 233467889999999999887 88888875
Q ss_pred cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee---
Q 002857 232 QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL--- 308 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL--- 308 (873)
...+..+|||||+ +++|.+++.. .....+++.+++.|+.||+.||+||| +.+|+||||||+|||+
T Consensus 92 ~~~~~~~lv~e~~-~~~l~~~l~~--------~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~ 159 (355)
T 2eu9_A 92 NFHGHMCIAFELL-GKNTFEFLKE--------NNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNS 159 (355)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHH--------TTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCC
T ss_pred eeCCeEEEEEecc-CCChHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecc
Confidence 4456899999999 6677777743 23356899999999999999999999 8999999999999999
Q ss_pred ----------------CCCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh
Q 002857 309 ----------------NDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT 372 (873)
Q Consensus 309 ----------------d~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT 372 (873)
+.++.+||+|||+++..... .....||..|+|||++.+..++.++||||||+++|||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 234 (355)
T 2eu9_A 160 EFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234 (355)
T ss_dssp CEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh
Confidence 56789999999999864322 223468999999999999999999999999999999999
Q ss_pred CCCCCCcc
Q 002857 373 GLRPSDDM 380 (873)
Q Consensus 373 Gk~Pf~~~ 380 (873)
|+.||...
T Consensus 235 g~~pf~~~ 242 (355)
T 2eu9_A 235 GFTLFQTH 242 (355)
T ss_dssp SSCSCCCS
T ss_pred CCCCCCCC
Confidence 99999763
No 233
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.2e-36 Score=324.78 Aligned_cols=251 Identities=22% Similarity=0.280 Sum_probs=197.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++ .....
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 95 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDSSS 95 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEE-----eCCCe
Confidence 468999999999999999999998889999999986432 33457899999999999999999999996 44667
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC---CC
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE---MT 313 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~---~~ 313 (873)
.++||||+++++|.+++.. ...+++..++.++.||+.||.||| +.+|+||||||+|||++.+ +.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~ 162 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIK----------RKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCD 162 (287)
T ss_dssp EEEEECCCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCC
T ss_pred EEEEEEccCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCccc
Confidence 8999999999999998842 235889999999999999999999 8899999999999999754 47
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+||+|||++........ .....+|..|+|||++.+. ++.++||||||+++|+|++|+.||....... ...
T Consensus 163 ~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~---- 232 (287)
T 2wei_A 163 IKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILK---- 232 (287)
T ss_dssp EEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH----
T ss_pred EEEeccCcceeecCCCc---cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHH--HHH----
Confidence 99999999986643321 1233589999999988764 8999999999999999999999997532111 000
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
.+........ .... ......+.+++.+||+.||++|||+.|+++
T Consensus 233 -------~~~~~~~~~~---------------~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 233 -------RVETGKYAFD---------------LPQW----RTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp -------HHHHCCCCCC---------------SGGG----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -------HHHcCCCCCC---------------chhh----hhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1100000000 0000 011234788999999999999999999986
No 234
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.1e-36 Score=331.61 Aligned_cols=258 Identities=19% Similarity=0.238 Sum_probs=173.8
Q ss_pred hhcCCCcce-eecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHH-HHHHhhhhccceeeeeeeecccccCCc
Q 002857 158 ATKGFSSEN-LIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVEC-EVMRNIIHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 158 at~~f~~~~-~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei-~iL~~L~HpNIV~llg~c~~~~~~~~~ 235 (873)
..++|.+.+ +||+|+||.||+|.+..+++.||||++... ....+|+ ..++.+.|+||+++++++.... ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMH-HGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCc
Confidence 356888854 699999999999999989999999998632 2233333 3456679999999999975321 2345
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC---CC
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND---EM 312 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~---~~ 312 (873)
..++||||+++|+|.+++.. .....+++.+++.|+.||+.||+||| +.+|+||||||+|||++. ++
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~--------~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~ 168 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQE--------RGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDA 168 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHT--------C-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTC
T ss_pred eEEEEEeccCCCCHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCc
Confidence 68999999999999999953 23356999999999999999999999 889999999999999976 45
Q ss_pred CeEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHh
Q 002857 313 TACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~ 392 (873)
.+||+|||+++...... .....+|..|+|||++.+..++.++||||||+++|||++|+.||......... ...
T Consensus 169 ~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~- 241 (336)
T 3fhr_A 169 VLKLTDFGFAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--PGM- 241 (336)
T ss_dssp CEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred eEEEeccccceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh--hhH-
Confidence 69999999998654321 22345899999999998889999999999999999999999999653221110 000
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
...+...... . ..+.. ..+...+.+++.+||+.||++|||+.|+++.
T Consensus 242 ------~~~~~~~~~~-----------~-~~~~~-------~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 242 ------KRRIRLGQYG-----------F-PNPEW-------SEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ---------------C-----------C-CTTTS-------TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ------HHhhhccccc-----------c-Cchhh-------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000000 0 00000 0112357889999999999999999999863
No 235
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.5e-36 Score=332.55 Aligned_cols=279 Identities=20% Similarity=0.239 Sum_probs=195.8
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--chhHHHHHHHHHHhhhhccceeeeeeeecccc-cCCc
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--ASKSFTVECEVMRNIIHRKIIKVVTACSRVDY-QGND 235 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~-~~~~ 235 (873)
.++|.+.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|+.++++++||||+++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46899999999999999999999999999999998653322 24678899999999999999999999743211 1112
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..++||||+. ++|.+++. ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+|
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~k 166 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------------LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELK 166 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEE
T ss_pred eEEEEecccc-CCHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEE
Confidence 4599999997 68888772 23889999999999999999999 88999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCC-CCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMG-HETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
|+|||+++..... .....+|..|+|||++.+ ..++.++||||||+++|||++|+.||....... .+..... .
T Consensus 167 l~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~-~ 239 (353)
T 3coi_A 167 ILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK-V 239 (353)
T ss_dssp ECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHH-H
T ss_pred EeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-H
Confidence 9999999865322 223468999999999877 678999999999999999999999997632211 1111110 0
Q ss_pred CchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 395 LPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 395 ~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
......+......... .......+...+.... ..........+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 240 TGVPGTEFVQKLNDKA--AKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HCBCCHHHHTTCSCHH--HHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hCCCCHHHHHHHhhHH--HHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000000000000 0000011100000000 0000112345889999999999999999998864
No 236
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.6e-36 Score=339.39 Aligned_cols=210 Identities=22% Similarity=0.271 Sum_probs=156.2
Q ss_pred CCCc-ceeecccCceEEEEEEEc--CCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCceE
Q 002857 161 GFSS-ENLIGAGNFASVYKGILF--EGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 161 ~f~~-~~~LG~G~fG~VYkg~~~--~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
.|.+ .++||+|+||.||+|++. .+++.||||++... .....+.+|+++|++++||||+++++++.. ......
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~~~ 95 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLS---HADRKV 95 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTTEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCCeE
Confidence 3555 458999999999999976 45789999998643 233578899999999999999999999742 346679
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeee----CCCCC
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILL----NDEMT 313 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILL----d~~~~ 313 (873)
+|||||+. |+|.+++...... ........+++..++.|+.||+.||+||| +.+|+||||||+|||+ +.++.
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~-~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRAS-KANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHH-C-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEeCCC-CCHHHHHHHhccc-cccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCc
Confidence 99999996 5888887531111 01122345899999999999999999999 8999999999999999 67889
Q ss_pred eEEeccccccccccccc-cccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcc
Q 002857 314 ACVADFGIARFLEATNE-QTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDM 380 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~ 380 (873)
+||+|||+++.+..... ........||..|+|||++.+. .++.++|||||||++|||+||+.||...
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99999999987643221 1222345689999999998874 5899999999999999999999999753
No 237
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.8e-36 Score=339.70 Aligned_cols=276 Identities=20% Similarity=0.252 Sum_probs=192.3
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccceeeeeeeecccc-cCCceEE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKIIKVVTACSRVDY-QGNDFKA 238 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~-~~~~~~~ 238 (873)
.+|.+.++||+|+||.||+|++..+++ ||+|++.... ....+|+++|+.++||||+++++++..... ......+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 468999999999999999999876665 8888775322 223479999999999999999999754322 2334578
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeC-CCCCeEEe
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLN-DEMTACVA 317 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd-~~~~vKLs 317 (873)
+||||++++ +.+.+.. .......+++..++.++.||++||+||| +.+|+||||||+|||++ .++.+||+
T Consensus 115 lv~e~~~~~-l~~~~~~------~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~ 184 (394)
T 4e7w_A 115 LVLEYVPET-VYRASRH------YAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLI 184 (394)
T ss_dssp EEEECCSEE-HHHHHHH------HHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEEC
T ss_pred EEeeccCcc-HHHHHHH------HHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEe
Confidence 999999874 4333321 0123456899999999999999999999 89999999999999999 79999999
Q ss_pred ccccccccccccccccccccccccccCCCcccCCC-CCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 318 DFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH-ETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 318 DFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
|||+++....... .....+|..|+|||++.+. .++.++|||||||++|||++|+.||....... .+...+...-.
T Consensus 185 DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~ 260 (394)
T 4e7w_A 185 DFGSAKILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGT 260 (394)
T ss_dssp CCTTCEECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCC
T ss_pred eCCCcccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCC
Confidence 9999987643322 2234689999999998765 58999999999999999999999997632211 11111111111
Q ss_pred h---hHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 397 E---RVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 397 ~---~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
. .+..+ ++..... ....+...++. ..........+.+|+.+||+.||++|||+.|+++
T Consensus 261 p~~~~~~~~-~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 261 PSREQIKTM-NPNYMEH-----KFPQIRPHPFS---KVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CCHHHHHHH-CGGGSSS-----CCCCCCCCCHH---HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCHHHHHhh-Chhhhhh-----ccccccCCcHH---HhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 1 11111 1000000 00000000000 0000012335889999999999999999998865
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.6e-36 Score=331.87 Aligned_cols=259 Identities=22% Similarity=0.222 Sum_probs=176.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-cchhHHHHHHH-HHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-DASKSFTVECE-VMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-~~~~~f~~Ei~-iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|.+.+.||+|+||.||+|.+..+++.||||+++.... .....+..|+. +++.++||||+++++++ ...+.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~-----~~~~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGAL-----FREGD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEE-----ECSSE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEE-----EeCCc
Confidence 3678899999999999999999988999999999975432 23345666666 67778999999999996 34567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC-CeeeccCCCCCeeeCCCCCeE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP-PIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~-gIvHrDLKpsNILLd~~~~vK 315 (873)
.++||||+++ +|.+++... .......+++..+..++.|++.||.||| +. +|+||||||+|||++.++.+|
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~-----~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~k 166 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYV-----YSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIK 166 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHH-----HHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEE
T ss_pred eEEEEeecCC-ChHHHHHHH-----HhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEE
Confidence 8999999975 888877421 1123567899999999999999999999 67 999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCccc----CCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHH
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYG----MGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWV 391 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l----~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~ 391 (873)
|+|||+++....... .....||..|+|||++ .+..++.++||||||+++|||++|+.||.........
T Consensus 167 l~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----- 238 (327)
T 3aln_A 167 LCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ----- 238 (327)
T ss_dssp ECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------
T ss_pred EccCCCceecccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH-----
Confidence 999999986643221 2233589999999998 4567899999999999999999999999753211000
Q ss_pred hhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 392 QSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 392 ~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
+......... .+..... ......+.+++.+||+.||++|||+.||++.
T Consensus 239 -----------~~~~~~~~~~------~~~~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 239 -----------LTQVVKGDPP------QLSNSEE--------REFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp ------------CCCCCSCCC------CCCCCSS--------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -----------HHHHhcCCCC------CCCCccc--------ccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0000000000 0000000 0012347889999999999999999999863
No 239
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.2e-36 Score=362.20 Aligned_cols=260 Identities=23% Similarity=0.364 Sum_probs=201.8
Q ss_pred hhcCCCcceeecccCceEEEEEEEcCC---CcEEEEEEeeccCC-cchhHHHHHHHHHHhhhhccceeeeeeeecccccC
Q 002857 158 ATKGFSSENLIGAGNFASVYKGILFEG---APAVAIKVFNFLHH-DASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 158 at~~f~~~~~LG~G~fG~VYkg~~~~~---g~~VAVK~l~~~~~-~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~ 233 (873)
..++|.+.+.||+|+||.||+|.+..+ +..||||+++.... ...+.+.+|+.++++++||||+++++++.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------ 461 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 461 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC------
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe------
Confidence 346688889999999999999998643 45799999875332 23467999999999999999999999862
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT 313 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~ 313 (873)
++..++||||+++|+|.+++.. ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++.
T Consensus 462 ~~~~~lv~E~~~~g~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~ 529 (656)
T 2j0j_A 462 ENPVWIIMELCTLGELRSFLQV---------RKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDC 529 (656)
T ss_dssp SSSCEEEEECCTTCBHHHHHHH---------TTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTE
T ss_pred cCceEEEEEcCCCCcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCC
Confidence 2457999999999999999953 2346899999999999999999999 889999999999999999999
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhhHHHHh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLQNWVQ 392 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l~~~~~ 392 (873)
+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |..||....... ..
T Consensus 530 vkL~DFG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~---- 602 (656)
T 2j0j_A 530 VKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VI---- 602 (656)
T ss_dssp EEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HH----
T ss_pred EEEEecCCCeecCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HH----
Confidence 99999999987643321 12223447789999999988899999999999999999997 999997532111 00
Q ss_pred hcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHh
Q 002857 393 SALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKK 471 (873)
Q Consensus 393 ~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~ 471 (873)
..+.... ..+... .+...+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 603 -------~~i~~~~---------------~~~~~~-------~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 603 -------GRIENGE---------------RLPMPP-------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp -------HHHHHTC---------------CCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------HHHHcCC---------------CCCCCc-------cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 0010000 000000 1123578899999999999999999999999998654
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=328.04 Aligned_cols=245 Identities=25% Similarity=0.351 Sum_probs=189.5
Q ss_pred HHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC------cchhHHHHHHHHHHhh----hhccceeeee
Q 002857 155 LYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH------DASKSFTVECEVMRNI----IHRKIIKVVT 224 (873)
Q Consensus 155 l~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~------~~~~~f~~Ei~iL~~L----~HpNIV~llg 224 (873)
.....++|.+.+.||+|+||.||+|++..+++.||||++..... .....+.+|+.++.++ +|+||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 34456789999999999999999999988999999999964432 1234567899999999 8999999999
Q ss_pred eeecccccCCceEEEEEee-cCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCC
Q 002857 225 ACSRVDYQGNDFKALVYEF-MPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKP 303 (873)
Q Consensus 225 ~c~~~~~~~~~~~~LV~Ey-~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKp 303 (873)
++ ...+..++|||| +.+++|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||
T Consensus 106 ~~-----~~~~~~~~v~e~~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp 167 (312)
T 2iwi_A 106 WF-----ETQEGFMLVLERPLPAQDLFDYITE----------KGPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKD 167 (312)
T ss_dssp EC----------CEEEEECCSSEEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSG
T ss_pred EE-----ecCCeEEEEEEecCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCh
Confidence 85 445668999999 789999999943 345899999999999999999999 88999999999
Q ss_pred CCeeeC-CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCCC-cchhhHhHHHHHHHHHhCCCCCCccc
Q 002857 304 SNILLN-DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETS-SYGDVYSFGILLLEMFTGLRPSDDMF 381 (873)
Q Consensus 304 sNILLd-~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s-~ksDVwSfGvvL~ELlTGk~Pf~~~~ 381 (873)
+|||++ .++.+||+|||+++...... .....|+..|+|||++.+..+. .++||||||+++|||++|+.||....
T Consensus 168 ~Nil~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 243 (312)
T 2iwi_A 168 ENILIDLRRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ 243 (312)
T ss_dssp GGEEEETTTTEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH
T ss_pred hhEEEeCCCCeEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH
Confidence 999999 88999999999998764322 2234589999999998776664 58999999999999999999996421
Q ss_pred ccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHH
Q 002857 382 KDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDV 461 (873)
Q Consensus 382 ~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EV 461 (873)
++....+. .+. .....+.+++.+||+.||++|||+.||
T Consensus 244 -------------------~~~~~~~~--------------~~~---------~~~~~~~~li~~~l~~~p~~Rps~~e~ 281 (312)
T 2iwi_A 244 -------------------EILEAELH--------------FPA---------HVSPDCCALIRRCLAPKPSSRPSLEEI 281 (312)
T ss_dssp -------------------HHHHTCCC--------------CCT---------TSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred -------------------HHhhhccC--------------Ccc---------cCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 00000000 000 012247789999999999999999999
Q ss_pred HH
Q 002857 462 EL 463 (873)
Q Consensus 462 l~ 463 (873)
++
T Consensus 282 l~ 283 (312)
T 2iwi_A 282 LL 283 (312)
T ss_dssp HH
T ss_pred hc
Confidence 75
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.4e-36 Score=330.77 Aligned_cols=246 Identities=24% Similarity=0.303 Sum_probs=196.6
Q ss_pred HHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc------chhHHHHHHHHHHhhh--hccceeeeee
Q 002857 154 ALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD------ASKSFTVECEVMRNII--HRKIIKVVTA 225 (873)
Q Consensus 154 el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~------~~~~f~~Ei~iL~~L~--HpNIV~llg~ 225 (873)
+.....++|++.+.||+|+||.||+|++..+++.||||+++..... ....+.+|+.++++++ |+||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 3344567899999999999999999999999999999999754322 2356788999999996 5999999999
Q ss_pred eecccccCCceEEEEEeecCC-CChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 002857 226 CSRVDYQGNDFKALVYEFMPN-GSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPS 304 (873)
Q Consensus 226 c~~~~~~~~~~~~LV~Ey~~~-GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKps 304 (873)
+ ...+..++|||++.+ ++|.+++.. ...+++..++.|+.||+.||+||| +.+|+||||||+
T Consensus 117 ~-----~~~~~~~lv~e~~~~~~~L~~~l~~----------~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~ 178 (320)
T 3a99_A 117 F-----ERPDSFVLILERPEPVQDLFDFITE----------RGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDE 178 (320)
T ss_dssp E-----ECSSEEEEEEECCSSEEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGG
T ss_pred E-----ecCCcEEEEEEcCCCCccHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHH
Confidence 6 456678999999986 899999842 346889999999999999999999 899999999999
Q ss_pred CeeeC-CCCCeEEeccccccccccccccccccccccccccCCCcccCCCCC-CcchhhHhHHHHHHHHHhCCCCCCcccc
Q 002857 305 NILLN-DEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHET-SSYGDVYSFGILLLEMFTGLRPSDDMFK 382 (873)
Q Consensus 305 NILLd-~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSfGvvL~ELlTGk~Pf~~~~~ 382 (873)
|||++ +++.+||+|||+++...... .....||..|+|||++.+..+ +.++||||||+++|||++|+.||....
T Consensus 179 NIll~~~~~~~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~- 253 (320)
T 3a99_A 179 NILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE- 253 (320)
T ss_dssp GEEEETTTTEEEECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-
T ss_pred HEEEeCCCCCEEEeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-
Confidence 99999 78999999999998764321 223458999999999877665 678999999999999999999996521
Q ss_pred cchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHH
Q 002857 383 DNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVE 462 (873)
Q Consensus 383 ~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl 462 (873)
++....... +. .....+.+++.+||+.||++|||+.||+
T Consensus 254 ------------------~~~~~~~~~--------------~~---------~~~~~~~~li~~~l~~dp~~Rps~~~ll 292 (320)
T 3a99_A 254 ------------------EIIRGQVFF--------------RQ---------RVSSECQHLIRWCLALRPSDRPTFEEIQ 292 (320)
T ss_dssp ------------------HHHHCCCCC--------------SS---------CCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ------------------hhhcccccc--------------cc---------cCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 000000000 00 0122477899999999999999999986
Q ss_pred H
Q 002857 463 L 463 (873)
Q Consensus 463 ~ 463 (873)
+
T Consensus 293 ~ 293 (320)
T 3a99_A 293 N 293 (320)
T ss_dssp T
T ss_pred c
Confidence 5
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=322.09 Aligned_cols=252 Identities=21% Similarity=0.252 Sum_probs=176.1
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc-c-hhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD-A-SKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~-~-~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|++.+.||+|+||.||+|.+..+++.||||++...... . .+.+.++..+++.++||||+++++++ ...+.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~-----~~~~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTF-----ITNTD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSSE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEE-----ecCCc
Confidence 45788899999999999999999889999999999754322 2 23344455577888999999999996 44567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCC-CeeeccCCCCCeeeCCCCCeE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKP-PIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~-gIvHrDLKpsNILLd~~~~vK 315 (873)
.++||||+ ++.+..++. .....+++..++.++.||+.||.||| +. +|+||||||+|||++.++.+|
T Consensus 99 ~~lv~e~~-~~~~~~l~~---------~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~k 165 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKK---------RMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIK 165 (318)
T ss_dssp EEEEECCC-SEEHHHHHH---------HHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEE
T ss_pred EEEEEecc-CCcHHHHHH---------HhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEE
Confidence 99999999 445555442 12356889999999999999999999 64 999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccC-----CCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM-----GHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNW 390 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~ 390 (873)
|+|||++........ .....+|..|+|||++. ...++.++||||||+++|||++|+.||.........+
T Consensus 166 l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--- 239 (318)
T 2dyl_A 166 LCDFGISGRLVDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL--- 239 (318)
T ss_dssp ECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH---
T ss_pred EEECCCchhccCCcc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHH---
Confidence 999999976543221 22345899999999984 4578899999999999999999999997532111111
Q ss_pred HhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 391 VQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 391 ~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+.. .... ..+... .....+.+++.+||+.||.+|||+.||++
T Consensus 240 ---------~~~~~----~~~~---------~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 240 ---------TKVLQ----EEPP---------LLPGHM-------GFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ---------HHHHH----SCCC---------CCCSSS-------CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---------HHHhc----cCCC---------CCCccC-------CCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11110 0000 000000 01224778999999999999999999986
No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.4e-35 Score=336.21 Aligned_cols=256 Identities=18% Similarity=0.237 Sum_probs=181.0
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceEEE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~~L 239 (873)
.|...++||+|+||+||.+. ..+++.||||++... ..+.+.+|+++|+++ +||||+++++++ ......+|
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~-----~~~~~~~l 86 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSE-----TTDRFLYI 86 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEE-----ECSSEEEE
T ss_pred eeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCeEEE
Confidence 44557889999999998754 357899999998642 335678999999987 899999999985 45678999
Q ss_pred EEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCC--------
Q 002857 240 VYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDE-------- 311 (873)
Q Consensus 240 V~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~-------- 311 (873)
||||+. |+|.+++...... .......++..++.|+.||+.||+||| +.+|+||||||+|||++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~---~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~ 159 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVS---DENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQ 159 (434)
T ss_dssp EECCCS-EEHHHHHHTC---------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCT
T ss_pred EEecCC-CCHHHHHhccCCC---chhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccc
Confidence 999995 6999999541100 001112345567889999999999999 8999999999999999654
Q ss_pred -----CCeEEeccccccccccccccc--cccccccccccCCCcccCC-------CCCCcchhhHhHHHHHHHHHh-CCCC
Q 002857 312 -----MTACVADFGIARFLEATNEQT--SSIGVKGTTGYIAPEYGMG-------HETSSYGDVYSFGILLLEMFT-GLRP 376 (873)
Q Consensus 312 -----~~vKLsDFGla~~~~~~~~~~--~~~~~~Gt~~Y~APE~l~~-------~~~s~ksDVwSfGvvL~ELlT-Gk~P 376 (873)
+.+||+|||+++......... ......||..|+|||++.+ ..++.++|||||||++|||+| |+.|
T Consensus 160 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~P 239 (434)
T 2rio_A 160 TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239 (434)
T ss_dssp TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCT
T ss_pred cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCC
Confidence 589999999998765432211 1223569999999999876 578999999999999999999 9999
Q ss_pred CCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC
Q 002857 377 SDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM 456 (873)
Q Consensus 377 f~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP 456 (873)
|........ .++....... ..+.. . .......+.+++.+||+.||++||
T Consensus 240 f~~~~~~~~---------------~i~~~~~~~~-----------~~~~~-~----~~~~~~~~~~li~~~L~~dP~~Rp 288 (434)
T 2rio_A 240 FGDKYSRES---------------NIIRGIFSLD-----------EMKCL-H----DRSLIAEATDLISQMIDHDPLKRP 288 (434)
T ss_dssp TCSTTTHHH---------------HHHHTCCCCC-----------CCTTC-C----CHHHHHHHHHHHHHHTCSSGGGSC
T ss_pred CCCchhhHH---------------HHhcCCCCcc-----------ccccc-c----cccchHHHHHHHHHHhhCChhhCC
Confidence 965322111 0111000000 00000 0 011234578999999999999999
Q ss_pred CHHHHHH
Q 002857 457 KINDVEL 463 (873)
Q Consensus 457 Tm~EVl~ 463 (873)
|+.||++
T Consensus 289 s~~eil~ 295 (434)
T 2rio_A 289 TAMKVLR 295 (434)
T ss_dssp CHHHHHT
T ss_pred CHHHHHh
Confidence 9999985
No 244
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.8e-34 Score=312.05 Aligned_cols=234 Identities=12% Similarity=0.043 Sum_probs=180.8
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc---chhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD---ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~---~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|+.++.+++|+||+++++++ ...+.
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVV-----HTRAG 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEE-----EECCc
Confidence 5799999999999999999999888999999999754332 236789999999999999999999996 34567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.++||||+++++|.+++.. . ....+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 106 ~~lv~e~~~g~~L~~~l~~-----------~-~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl 170 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADT-----------S-PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVL 170 (286)
T ss_dssp EEEEEECCCEEEHHHHHTT-----------C-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEE
T ss_pred EEEEEEecCCCCHHHHHhc-----------C-CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEE
Confidence 9999999999999999842 1 244568899999999999999 899999999999999999999999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
++++ |++| ++.++||||||+++|||+||+.||........ +. .......
T Consensus 171 ~~~~----------------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~-~~~~~~~ 219 (286)
T 3uqc_A 171 AYPA----------------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-LA-PAERDTA 219 (286)
T ss_dssp CSCC----------------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-SE-ECCBCTT
T ss_pred Eecc----------------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-hH-HHHHHhc
Confidence 8543 3333 68899999999999999999999976332110 00 0000000
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHHhh
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELGLRLIKKKL 472 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~Le~i~~~l 472 (873)
. ... ........+...+.+++.+||+.||++| |+.|+++.|+.+....
T Consensus 220 ~------------~~~---------------~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 220 G------------QPI---------------EPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp S------------CBC---------------CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred c------------CCC---------------ChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0 000 0000000112357889999999999999 9999999999876543
No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-34 Score=349.73 Aligned_cols=249 Identities=20% Similarity=0.322 Sum_probs=195.5
Q ss_pred hcCCCcceeecccCceEEEEEEEcC-CCcEEEEEEeeccC-CcchhHHHHHHHHHHhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFE-GAPAVAIKVFNFLH-HDASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~-~g~~VAVK~l~~~~-~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|.+.+.||+|+||.||+|.+.. +++.||||++.... ......+.+|++++++++||||+++++++..........
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 4689999999999999999999876 68999999986432 233457889999999999999999999986533222233
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEE
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACV 316 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKL 316 (873)
.+|||||+++++|.+++. ..+++.+++.|+.||+.||.||| +.+|+||||||+|||++.+ .+||
T Consensus 159 ~~lv~E~~~g~~L~~~~~------------~~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl 222 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG------------QKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKL 222 (681)
T ss_dssp EEEEEECCCCEECC----------------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEE
T ss_pred eEEEEEeCCCCcHHHHHh------------CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEE
Confidence 699999999999998772 15899999999999999999999 8999999999999999986 8999
Q ss_pred eccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCc
Q 002857 317 ADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALP 396 (873)
Q Consensus 317 sDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~ 396 (873)
+|||+++..... ....||+.|+|||++.+.. +.++|||||||++|||++|..||........ .
T Consensus 223 ~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~ 285 (681)
T 2pzi_A 223 IDLGAVSRINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------P 285 (681)
T ss_dssp CCCTTCEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------C
T ss_pred EecccchhcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------c
Confidence 999999865432 2346899999999987654 8999999999999999999888765221110 0
Q ss_pred hhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCC-CHHHHHHHHHHHHHhh
Q 002857 397 ERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERM-KINDVELGLRLIKKKL 472 (873)
Q Consensus 397 ~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRP-Tm~EVl~~Le~i~~~l 472 (873)
. ... .......+.+|+.+||+.||++|| ++.++...|..+....
T Consensus 286 ~-----------~~~---------------------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 286 E-----------DDP---------------------VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp T-----------TCH---------------------HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred c-----------ccc---------------------ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 0 000 001123477899999999999999 5777778887765443
No 246
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.7e-35 Score=332.62 Aligned_cols=250 Identities=21% Similarity=0.281 Sum_probs=181.3
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCceE
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~~~ 237 (873)
..+|...++||+|+||+||... ..+++.||||++.... ...+.+|+++|+++ +|||||++++++ ......
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~-~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~-----~~~~~~ 93 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTE-----KDRQFQ 93 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEE-ESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEE-----EETTEE
T ss_pred cEEEecCCeeecCcCEEEEEEE-EeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCEE
Confidence 4568889999999999965432 3578899999986432 24567899999999 799999999985 456678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC-----CC
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND-----EM 312 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~-----~~ 312 (873)
+|||||+. |+|.+++.. ....+.+..++.|+.||+.||+||| +.+|+||||||+|||++. ..
T Consensus 94 ~lv~E~~~-g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~ 160 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQ---------KDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKI 160 (432)
T ss_dssp EEEEECCS-EEHHHHHHS---------SSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBC
T ss_pred EEEEECCC-CCHHHHHHh---------cCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCce
Confidence 99999996 699999853 2334556677899999999999999 899999999999999943 34
Q ss_pred CeEEeccccccccccccc-cccccccccccccCCCcccC---CCCCCcchhhHhHHHHHHHHHh-CCCCCCcccccchhh
Q 002857 313 TACVADFGIARFLEATNE-QTSSIGVKGTTGYIAPEYGM---GHETSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNL 387 (873)
Q Consensus 313 ~vKLsDFGla~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSfGvvL~ELlT-Gk~Pf~~~~~~~~~l 387 (873)
.+||+|||+++....... ........||..|+|||++. ...++.++|||||||++|||+| |..||........
T Consensus 161 ~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-- 238 (432)
T 3p23_A 161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-- 238 (432)
T ss_dssp CEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH--
T ss_pred eEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH--
Confidence 688999999987653321 12233456999999999987 4567889999999999999999 9999854221110
Q ss_pred HHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHH
Q 002857 388 QNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVEL 463 (873)
Q Consensus 388 ~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~ 463 (873)
..+........ ..+. . .....+.+|+.+||+.||++|||+.||++
T Consensus 239 ------------~~~~~~~~~~~-----------~~~~----~----~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 239 ------------NILLGACSLDC-----------LHPE----K----HEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ------------HHHTTCCCCTT-----------SCTT----C----HHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------------HHHhccCCccc-----------cCcc----c----cccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00000000000 0000 0 01223678999999999999999999983
No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-35 Score=333.88 Aligned_cols=261 Identities=13% Similarity=0.129 Sum_probs=187.7
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC---cchhHHHHHHHHHHhhhh-ccceeee---------ee
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH---DASKSFTVECEVMRNIIH-RKIIKVV---------TA 225 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~---~~~~~f~~Ei~iL~~L~H-pNIV~ll---------g~ 225 (873)
+.+|...++||+|+||.||+|++..+++.||||+++.... ...+.+.+|+.+++.++| +|...+. ..
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 4567788999999999999999999999999999873322 235789999999999976 3221111 11
Q ss_pred ee------------cccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC
Q 002857 226 CS------------RVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK 293 (873)
Q Consensus 226 c~------------~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s 293 (873)
+. ..........+++|+++ +++|.+++...... ......+++..++.|+.||+.||+||| +
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~---~~~~~~l~~~~~~~i~~qi~~aL~~LH---~ 229 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH---SSTHKSLVHHARLQLTLQVIRLLASLH---H 229 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHH---TTTSHHHHHHHHHHHHHHHHHHHHHHH---H
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHHHHHHHHH---h
Confidence 00 00000022356777765 68999998431111 123456889999999999999999999 8
Q ss_pred CCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCccc----------CCCCCCcchhhHhH
Q 002857 294 PPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYG----------MGHETSSYGDVYSF 363 (873)
Q Consensus 294 ~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l----------~~~~~s~ksDVwSf 363 (873)
.+|+||||||+|||++.++.+||+|||+++..... .....| ..|+|||++ .+..++.++|||||
T Consensus 230 ~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSl 303 (413)
T 3dzo_A 230 YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTL 303 (413)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHH
T ss_pred CCcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHH
Confidence 99999999999999999999999999999865332 233457 999999998 66678999999999
Q ss_pred HHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHH
Q 002857 364 GILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEI 443 (873)
Q Consensus 364 GvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L 443 (873)
||++|||+||+.||........ .+..+... +. ....+.+|
T Consensus 304 Gvil~elltg~~Pf~~~~~~~~-----------------~~~~~~~~-------------~~----------~~~~~~~l 343 (413)
T 3dzo_A 304 GLAIYWIWCADLPNTDDAALGG-----------------SEWIFRSC-------------KN----------IPQPVRAL 343 (413)
T ss_dssp HHHHHHHHHSSCCCCTTGGGSC-----------------SGGGGSSC-------------CC----------CCHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcchhhh-----------------HHHHHhhc-------------cc----------CCHHHHHH
Confidence 9999999999999975321110 00001000 00 01347789
Q ss_pred HHHhhccCcCCCCCHHHHHHH--HHHHHHhh
Q 002857 444 GVACSAELPGERMKINDVELG--LRLIKKKL 472 (873)
Q Consensus 444 ~~~CL~~dP~eRPTm~EVl~~--Le~i~~~l 472 (873)
+.+||+.||++|||+.|+++. ++.+.+.+
T Consensus 344 i~~~l~~dP~~Rpt~~~~l~~~~~~~~~~~~ 374 (413)
T 3dzo_A 344 LEGFLRYPKEDRLLPLQAMETPEYEQLRTEL 374 (413)
T ss_dssp HHHHTCSSGGGSCCHHHHTTSHHHHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHhCHHHHHHHHHH
Confidence 999999999999999988753 44444433
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=7.2e-35 Score=348.07 Aligned_cols=283 Identities=22% Similarity=0.272 Sum_probs=201.1
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeecc-CCcchhHHHHHHHHHHhhhhccceeeeeeeeccc-ccCCceE
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFL-HHDASKSFTVECEVMRNIIHRKIIKVVTACSRVD-YQGNDFK 237 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~-~~~~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~-~~~~~~~ 237 (873)
++|.+.+.||+|+||.||+|.+..+++.||||+++.. .....+.+.+|++++++++||||+++++++.... +..++..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6899999999999999999999888999999998753 2233467899999999999999999999864321 1236678
Q ss_pred EEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCC---e
Q 002857 238 ALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMT---A 314 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~---v 314 (873)
++||||+++|+|.+++.. ......+++..++.|+.||+.||+||| +.+|+||||||+|||++.++. +
T Consensus 94 ~LVmEy~~ggsL~~~L~~-------~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~v 163 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQ-------FENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIH 163 (676)
T ss_dssp CCEEECCSSCBHHHHHHS-------SSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEE
T ss_pred EEEEEeCCCCCHHHHHHh-------cccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeE
Confidence 999999999999999953 122346899999999999999999999 899999999999999996664 9
Q ss_pred EEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhc
Q 002857 315 CVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSA 394 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~ 394 (873)
||+|||+++...... ......||..|+|||++.+..++.++||||||+++|||++|+.||..... ...|....
T Consensus 164 KL~DFG~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i 236 (676)
T 3qa8_A 164 KIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKV 236 (676)
T ss_dssp EECSCCCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTC
T ss_pred EEccccccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhh
Confidence 999999998764432 22335689999999999999999999999999999999999999965211 11111111
Q ss_pred CchhHHH-HhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHH-----HHHHHHH
Q 002857 395 LPERVEE-IVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDV-----ELGLRLI 468 (873)
Q Consensus 395 ~~~~l~e-lid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EV-----l~~Le~i 468 (873)
....... .....+..... .. ...+...... ......+.+++..||+.||++|||+.|+ .+.++.+
T Consensus 237 ~~~~~~~~~~~~~l~g~~~----~~--~~lp~p~~l~---~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~i 307 (676)
T 3qa8_A 237 REKSNEHIVVYDDLTGAVK----FS--SVLPTPNHLS---GILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI 307 (676)
T ss_dssp C------CCSCCCCSSSCC----CC--SSSCCSCCCC---GGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHH
T ss_pred hcccchhhhhhhhhccccc----cc--cccCCchhhc---hhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHH
Confidence 1110000 00000100000 00 0001111000 1123468899999999999999999884 4555544
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=6.9e-34 Score=307.75 Aligned_cols=237 Identities=19% Similarity=0.277 Sum_probs=179.3
Q ss_pred hcCCCcc-eeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHH-HhhhhccceeeeeeeecccccCCce
Q 002857 159 TKGFSSE-NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVM-RNIIHRKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~-~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL-~~L~HpNIV~llg~c~~~~~~~~~~ 236 (873)
.++|.+. +.||+|+||.||+|.+..+++.||||+++. ...+.+|+.++ +.++||||+++++++... ......
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~ 89 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 89 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCce
Confidence 3567776 789999999999999999999999999863 35678899988 455899999999987432 133567
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCC---CCC
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLND---EMT 313 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~---~~~ 313 (873)
.++||||+++|+|.+++.. .....+++..++.|+.||+.||+||| +.+|+||||||+|||++. ++.
T Consensus 90 ~~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~ 158 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQD--------RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAI 158 (299)
T ss_dssp EEEEECCCCSCBHHHHHHH--------CTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCC
T ss_pred EEEEEeecCCCcHHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCc
Confidence 8999999999999999953 23456999999999999999999999 899999999999999997 789
Q ss_pred eEEeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhh
Q 002857 314 ACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQS 393 (873)
Q Consensus 314 vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~ 393 (873)
+||+|||++.... +..++.++||||||+++|||+||+.||........ ......
T Consensus 159 ~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~--~~~~~~ 212 (299)
T 3m2w_A 159 LKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--SPGMKT 212 (299)
T ss_dssp EEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------CCSCC
T ss_pred EEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh--hHHHHH
Confidence 9999999986432 23467899999999999999999999965321110 000000
Q ss_pred cCchhHHHHhhhhhhhhhhHHHHHhhhccCCCCchhHHHHHHHHHHHHHHHHHhhccCcCCCCCHHHHHHH
Q 002857 394 ALPERVEEIVDTLFFKEIEEEETVYKYKKAPSSSTQRSIILECLNSICEIGVACSAELPGERMKINDVELG 464 (873)
Q Consensus 394 ~~~~~l~elid~~L~~~~~~r~~~~~i~~~p~~~~~~~~~~e~~~~L~~L~~~CL~~dP~eRPTm~EVl~~ 464 (873)
.+ ..... +.. ..........+.+++.+||+.||++|||+.|+++.
T Consensus 213 ~~-----------~~~~~------------~~~---~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 213 RI-----------RMGQY------------EFP---NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SS-----------CTTCC------------SSC---HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HH-----------hhccc------------cCC---chhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00 00000 000 00001123357889999999999999999999763
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=3.3e-33 Score=307.44 Aligned_cols=198 Identities=17% Similarity=0.175 Sum_probs=160.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccC--------CcchhHHHHHHHHHHhhh---------hcccee
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLH--------HDASKSFTVECEVMRNII---------HRKIIK 221 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~--------~~~~~~f~~Ei~iL~~L~---------HpNIV~ 221 (873)
.++|++.+.||+|+||.||+|++ +++.||||+++... ....+.+.+|+.+++.++ |+|||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 45788999999999999999987 67999999997543 222377999999999997 666666
Q ss_pred eeeeeecc-------------------------cccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHH
Q 002857 222 VVTACSRV-------------------------DYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLN 276 (873)
Q Consensus 222 llg~c~~~-------------------------~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~ 276 (873)
+.+.+... ++......+|||||+++|++.+.+. ...+++..++.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----------~~~~~~~~~~~ 165 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----------TKLSSLATAKS 165 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----------TTCCCHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----------hcCCCHHHHHH
Confidence 66543210 0112678999999999998776662 14578999999
Q ss_pred HHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCC--------------------CeEEeccccccccccccccccccc
Q 002857 277 IAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEM--------------------TACVADFGIARFLEATNEQTSSIG 336 (873)
Q Consensus 277 Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~--------------------~vKLsDFGla~~~~~~~~~~~~~~ 336 (873)
|+.||+.||+|||+ +.+|+||||||+|||++.++ .+||+|||+++..... .
T Consensus 166 i~~qi~~aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~ 236 (336)
T 2vuw_A 166 ILHQLTASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------I 236 (336)
T ss_dssp HHHHHHHHHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------E
T ss_pred HHHHHHHHHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------c
Confidence 99999999999993 37899999999999999886 8999999999866431 2
Q ss_pred cccccccCCCcccCCCCCCcchhhHhHHHH-HHHHHhCCCCCCc
Q 002857 337 VKGTTGYIAPEYGMGHETSSYGDVYSFGIL-LLEMFTGLRPSDD 379 (873)
Q Consensus 337 ~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvv-L~ELlTGk~Pf~~ 379 (873)
..||..|+|||++.+.. +.++||||||++ .+++++|..||..
T Consensus 237 ~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~ 279 (336)
T 2vuw_A 237 VVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN 279 (336)
T ss_dssp EECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred EEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc
Confidence 36999999999998776 899999998777 7778889998743
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=1.5e-27 Score=282.33 Aligned_cols=186 Identities=15% Similarity=0.061 Sum_probs=129.0
Q ss_pred eecccCceEEEEEEEcCCCcEEEEEEeeccC----------CcchhHHHHHHHHHHhh-hhccceeeeeeeecccccCCc
Q 002857 167 LIGAGNFASVYKGILFEGAPAVAIKVFNFLH----------HDASKSFTVECEVMRNI-IHRKIIKVVTACSRVDYQGND 235 (873)
Q Consensus 167 ~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~----------~~~~~~f~~Ei~iL~~L-~HpNIV~llg~c~~~~~~~~~ 235 (873)
.++.|++|.+..++..-.|+.+|+|++.... ....++|.+|+++|+++ .|+||+++++++ +++.
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHG-----ENAQ 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEE-----ECSS
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----EECC
Confidence 4566777777766665668889999996432 11235699999999999 799999999994 6778
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeE
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTAC 315 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vK 315 (873)
..||||||++|++|.++|.. ...++. .+|+.||+.||+||| +++||||||||+||||+.++++|
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~----------~~~l~~---~~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vK 379 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAA----------GEEIDR---EKILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHAR 379 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHT----------TCCCCH---HHHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHHh----------CCCCCH---HHHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEE
Confidence 89999999999999999953 334544 358999999999999 89999999999999999999999
Q ss_pred EeccccccccccccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCC
Q 002857 316 VADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRP 376 (873)
Q Consensus 316 LsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~P 376 (873)
|+|||+|+...... .......||+.|+|||++.+. +..++|+||+|++++++.++..+
T Consensus 380 L~DFGlAr~~~~~~--~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 380 LIDFGSIVTTPQDC--SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ECCCTTEESCC-----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred EeecccCeeCCCCC--ccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 99999998764432 223346799999999998764 67789999999998888766444
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=1.6e-24 Score=254.76 Aligned_cols=185 Identities=18% Similarity=0.140 Sum_probs=141.7
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCc--------chhHHHHHHHHHHhhhhccceeeeeeeecccccCC
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHD--------ASKSFTVECEVMRNIIHRKIIKVVTACSRVDYQGN 234 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~--------~~~~f~~Ei~iL~~L~HpNIV~llg~c~~~~~~~~ 234 (873)
...++||+|+||.||+|.. .++.+|+|+....... ..+.+.+|+++|++++||||+++..++. ..
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~-----~~ 411 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV-----DL 411 (540)
T ss_dssp ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE-----ET
T ss_pred CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE-----eC
Confidence 4467999999999999954 5678999986532211 1245899999999999999995555432 23
Q ss_pred ceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCe
Q 002857 235 DFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTA 314 (873)
Q Consensus 235 ~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~v 314 (873)
+..+|||||+++++|.+++.. ++.|+.||++||+||| +.+|+||||||+|||++. ++
T Consensus 412 ~~~~lVmE~~~ggsL~~~l~~------------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~ 468 (540)
T 3en9_A 412 DNKRIMMSYINGKLAKDVIED------------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DL 468 (540)
T ss_dssp TTTEEEEECCCSEEHHHHSTT------------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SE
T ss_pred CccEEEEECCCCCCHHHHHHH------------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eE
Confidence 345999999999999999831 5689999999999999 899999999999999998 99
Q ss_pred EEeccccccccccccccc-----cccccccccccCCCcccCC--CCCCcchhhHhHHHHHHHHHhCCCCC
Q 002857 315 CVADFGIARFLEATNEQT-----SSIGVKGTTGYIAPEYGMG--HETSSYGDVYSFGILLLEMFTGLRPS 377 (873)
Q Consensus 315 KLsDFGla~~~~~~~~~~-----~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSfGvvL~ELlTGk~Pf 377 (873)
||+|||+++......... ......||+.|+|||++.. ..|+..+|+||..+-.++.+.++.+|
T Consensus 469 kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 469 YIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp EECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred EEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 999999999765432211 1234569999999999887 56788899999999999988877766
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=4.9e-22 Score=214.73 Aligned_cols=153 Identities=16% Similarity=0.114 Sum_probs=121.5
Q ss_pred HHHHHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC------------------cchhHHHHHHHHHHh
Q 002857 152 YEALYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH------------------DASKSFTVECEVMRN 213 (873)
Q Consensus 152 ~~el~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~------------------~~~~~f~~Ei~iL~~ 213 (873)
+..+......|.+.+.||+|+||.||+|.+ .+++.||||+++.... .....+.+|+++|++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 445555566778889999999999999999 7899999999863321 123568899999999
Q ss_pred hhhccceeeeeeeecccccCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCC
Q 002857 214 IIHRKIIKVVTACSRVDYQGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCK 293 (873)
Q Consensus 214 L~HpNIV~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s 293 (873)
++ | +++.+++. .+..++||||+++|+|.+ +.. .....++.||+.||.||| +
T Consensus 161 l~--~-~~v~~~~~------~~~~~lvmE~~~g~~L~~-l~~----------------~~~~~i~~qi~~~l~~lH---~ 211 (282)
T 1zar_A 161 LQ--G-LAVPKVYA------WEGNAVLMELIDAKELYR-VRV----------------ENPDEVLDMILEEVAKFY---H 211 (282)
T ss_dssp TT--T-SSSCCEEE------EETTEEEEECCCCEEGGG-CCC----------------SCHHHHHHHHHHHHHHHH---H
T ss_pred cc--C-CCcCeEEe------ccceEEEEEecCCCcHHH-cch----------------hhHHHHHHHHHHHHHHHH---H
Confidence 98 4 66666532 134599999999999998 521 234579999999999999 8
Q ss_pred CCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccC
Q 002857 294 PPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGM 350 (873)
Q Consensus 294 ~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~ 350 (873)
.+|+||||||+|||++ ++.+||+|||+++. +..|+|||++.
T Consensus 212 ~giiHrDlkp~NILl~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 212 RGIVHGDLSQYNVLVS-EEGIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp TTEECSCCSTTSEEEE-TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred CCCEeCCCCHHHEEEE-CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 9999999999999999 99999999999973 33467888754
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=9.7e-18 Score=178.38 Aligned_cols=138 Identities=20% Similarity=0.196 Sum_probs=106.7
Q ss_pred CCcceeecccCceEEEEEEEcCCCcE--EEEEEeeccCCcc------------------------hhHHHHHHHHHHhhh
Q 002857 162 FSSENLIGAGNFASVYKGILFEGAPA--VAIKVFNFLHHDA------------------------SKSFTVECEVMRNII 215 (873)
Q Consensus 162 f~~~~~LG~G~fG~VYkg~~~~~g~~--VAVK~l~~~~~~~------------------------~~~f~~Ei~iL~~L~ 215 (873)
|.+.+.||+|+||.||+|.+..+|+. ||||+++...... ...+.+|+.+|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999998677888 9999975331110 126889999999999
Q ss_pred hccc--eeeeeeeecccccCCceEEEEEeecCC-C----ChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHH
Q 002857 216 HRKI--IKVVTACSRVDYQGNDFKALVYEFMPN-G----SLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYL 288 (873)
Q Consensus 216 HpNI--V~llg~c~~~~~~~~~~~~LV~Ey~~~-G----SL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yL 288 (873)
|+++ ..++.+ ...+|||||+.+ | +|.+++.. .++..+..++.||+.||.||
T Consensus 129 ~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~-------------~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 129 EAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE-------------LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG-------------GGGSCHHHHHHHHHHHHHHH
T ss_pred hCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc-------------cChHHHHHHHHHHHHHHHHH
Confidence 9864 333332 235899999942 4 55554311 23557889999999999999
Q ss_pred hhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccc
Q 002857 289 HLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFL 325 (873)
Q Consensus 289 H~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~ 325 (873)
|. ..+|+||||||+|||++. .++|+|||+|...
T Consensus 187 H~--~~givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQ--EAELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HH--TSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HH--HCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 94 479999999999999998 9999999999754
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.57 E-value=3.6e-15 Score=167.46 Aligned_cols=145 Identities=14% Similarity=0.100 Sum_probs=98.6
Q ss_pred cCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCC--------------cchhHHHHHHHHHHhhhhccceeeeee
Q 002857 160 KGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH--------------DASKSFTVECEVMRNIIHRKIIKVVTA 225 (873)
Q Consensus 160 ~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~--------------~~~~~f~~Ei~iL~~L~HpNIV~llg~ 225 (873)
.=|++.+.||.|+||.||+|.. .+|+.||||+++.... ........++++.....|+|+++++..
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~ 173 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE 173 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 3488999999999999999987 5688999999863210 011122333333333344444444322
Q ss_pred eecccc-cCCceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCC
Q 002857 226 CSRVDY-QGNDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPS 304 (873)
Q Consensus 226 c~~~~~-~~~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKps 304 (873)
...... ......+|||||+++++|.++.. ......++.||+.+|.||| ..+||||||||.
T Consensus 174 gv~vp~p~~~~~~~LVME~i~G~~L~~l~~----------------~~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~ 234 (397)
T 4gyi_A 174 GFPVPEPIAQSRHTIVMSLVDALPMRQVSS----------------VPDPASLYADLIALILRLA---KHGLIHGDFNEF 234 (397)
T ss_dssp TCSCCCEEEEETTEEEEECCSCEEGGGCCC----------------CSCHHHHHHHHHHHHHHHH---HTTEECSCCSTT
T ss_pred CCCCCeeeeccCceEEEEecCCccHhhhcc----------------cHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHH
Confidence 110000 00012369999999988876542 1134578899999999999 789999999999
Q ss_pred CeeeCCCC----------CeEEeccccccc
Q 002857 305 NILLNDEM----------TACVADFGIARF 324 (873)
Q Consensus 305 NILLd~~~----------~vKLsDFGla~~ 324 (873)
|||+++++ .+.|+||+.+..
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred HEEEeCCCCcccccccccceEEEEeCCccc
Confidence 99998776 389999998764
No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=3.8e-11 Score=126.63 Aligned_cols=148 Identities=16% Similarity=0.082 Sum_probs=113.9
Q ss_pred HHHhhcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-hccceeeeeeeecccccC
Q 002857 155 LYSATKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQG 233 (873)
Q Consensus 155 l~~at~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~ 233 (873)
+.....+|.+...++.|+.+.||++.. ++..+++|+...........+.+|+++++.+. |.++.++++++ ..
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~-----~~ 81 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFE-----RH 81 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEE-----EE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEE-----ec
Confidence 444556788888999999999999864 46789999986432233457999999999994 67788888875 33
Q ss_pred CceEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhC----------------------
Q 002857 234 NDFKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLG---------------------- 291 (873)
Q Consensus 234 ~~~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~---------------------- 291 (873)
.+..++||||++|.+|.+.+. +......++.+++++|+.||.-
T Consensus 82 ~~~~~lv~e~i~G~~l~~~~~---------------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~ 146 (263)
T 3tm0_A 82 DGWSNLLMSEADGVLCSEEYE---------------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLL 146 (263)
T ss_dssp TTEEEEEEECCSSEEHHHHCC---------------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHH
T ss_pred CCceEEEEEecCCeehhhccC---------------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHH
Confidence 567899999999999887641 1123457889999999999951
Q ss_pred ----------------------------------CCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 292 ----------------------------------CKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 292 ----------------------------------~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
....++|+|+++.|||++++..+.|+||+.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 147 NNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766677999998753
No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.08 E-value=2.7e-10 Score=118.76 Aligned_cols=139 Identities=17% Similarity=0.089 Sum_probs=98.0
Q ss_pred hcCCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc--ceeeeeeeecccccCCce
Q 002857 159 TKGFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK--IIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 159 t~~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN--IV~llg~c~~~~~~~~~~ 236 (873)
..++.+..+.+.|..+.||++.. .+++.+++|+.... ....+..|+++++.+.+.+ +.+++++. ..++.
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~-----~~~~~ 89 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVV-----TEAGR 89 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEE-----ECSSC
T ss_pred cCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEec-----cCCCC
Confidence 34555544444566799999964 55678999997543 3356889999999997655 44577763 33456
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC------------------------
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC------------------------ 292 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~------------------------ 292 (873)
.++||||++|.+|. ... .....++.++++.|+.||...
T Consensus 90 ~~~v~e~i~G~~l~--~~~----------------~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T 1nd4_A 90 DWLLLGEVPGQDLL--SSH----------------LAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAG 151 (264)
T ss_dssp EEEEEECCSSEETT--TSC----------------CCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTT
T ss_pred CEEEEEecCCcccC--cCc----------------CCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcC
Confidence 89999999998884 211 012356777777777777321
Q ss_pred -------------------------------CCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 293 -------------------------------KPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 293 -------------------------------s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
...++|+|++|.|||++++..+.|+||+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 152 LVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12299999999999998876677999998763
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.06 E-value=8e-11 Score=143.74 Aligned_cols=84 Identities=31% Similarity=0.448 Sum_probs=72.4
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|+|.||.+|++|++|+.|+|++|+|+|.||..|++|++|+.||||+|+|+|.+|..+..+..+..+++++|.|+|
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 57888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCc
Q 002857 81 GIPE 84 (873)
Q Consensus 81 ~~p~ 84 (873)
.+|.
T Consensus 719 ~iP~ 722 (768)
T 3rgz_A 719 PIPE 722 (768)
T ss_dssp ECCS
T ss_pred cCCC
Confidence 7765
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=98.98 E-value=1.9e-10 Score=140.36 Aligned_cols=82 Identities=35% Similarity=0.604 Sum_probs=77.4
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|+|.||.+|++|++|+.||||+|+|+|.||..|++|++|++||||+|+|+|.||....+.......+.+|+.|||
T Consensus 663 Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 663 LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEES
T ss_pred CcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcC
Confidence 68999999999999999999999999999999999999999999999999999999999987777777778889999999
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 743 ~~ 744 (768)
T 3rgz_A 743 YP 744 (768)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 260
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.86 E-value=6.3e-09 Score=115.05 Aligned_cols=146 Identities=14% Similarity=0.166 Sum_probs=105.6
Q ss_pred cceeecccCceEEEEEEEcCCCcEEEEEEee--ccC-CcchhHHHHHHHHHHhhh--hccceeeeeeeecccccCCceEE
Q 002857 164 SENLIGAGNFASVYKGILFEGAPAVAIKVFN--FLH-HDASKSFTVECEVMRNII--HRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 164 ~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~--~~~-~~~~~~f~~Ei~iL~~L~--HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
..+.|+.|.++.||+... .+..+++|+.. ... ......+.+|+.+++.+. +..+.+++.++.... ..+..+
T Consensus 42 ~~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEEC--SSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSSCE
T ss_pred eEEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCCeE
Confidence 357899999999999865 34578888765 222 122357889999999997 456788888864321 114578
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC--------------------------
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC-------------------------- 292 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~-------------------------- 292 (873)
+||||++|..+.+.. ...++..++..++.++++.|+.||...
T Consensus 118 ~vme~v~G~~l~~~~------------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS------------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQ 185 (359)
T ss_dssp EEEECCCCBCCCCTT------------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHH
T ss_pred EEEEecCCeecCCCc------------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHH
Confidence 999999997775422 123677788899999999999999520
Q ss_pred -----------------------------CCCeeeccCCCCCeeeCCCCC--eEEecccccccc
Q 002857 293 -----------------------------KPPIAHCDIKPSNILLNDEMT--ACVADFGIARFL 325 (873)
Q Consensus 293 -----------------------------s~gIvHrDLKpsNILLd~~~~--vKLsDFGla~~~ 325 (873)
...++|+|+++.|||++.++. +.|+||+.+..-
T Consensus 186 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 186 YKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999997653 689999998753
No 261
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=98.84 E-value=2.6e-09 Score=107.92 Aligned_cols=84 Identities=20% Similarity=0.221 Sum_probs=72.7
Q ss_pred CCCCccccCcCc-CCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGL-SLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~-~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|+|++..|. .|+.|++|++|+|++|+|++.+|..|.++++|++|+|++|+|++..|..+..+..+..+++++|.|.
T Consensus 36 l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 115 (192)
T 1w8a_A 36 LNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQIS 115 (192)
T ss_dssp CCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCC
Confidence 578999865554 3889999999999999999888999999999999999999999888887777888899999999998
Q ss_pred CCCCc
Q 002857 80 GGIPE 84 (873)
Q Consensus 80 G~~p~ 84 (873)
+.++.
T Consensus 116 ~~~~~ 120 (192)
T 1w8a_A 116 CVMPG 120 (192)
T ss_dssp EECTT
T ss_pred eeCHH
Confidence 76553
No 262
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=98.84 E-value=4.3e-09 Score=104.33 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=45.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
+++|+|+ .+|..+. ++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..|..+..+..+..+++++|.|.+
T Consensus 16 ~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~ 92 (170)
T 3g39_A 16 CSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKS 92 (170)
T ss_dssp CTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred eCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCE
Confidence 3455555 3555553 566666666666665555556666666666666666665544444455555566666666655
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 93 ~~ 94 (170)
T 3g39_A 93 IP 94 (170)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 263
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=98.80 E-value=6.9e-09 Score=103.44 Aligned_cols=80 Identities=13% Similarity=0.042 Sum_probs=57.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
+++|+|+ .+|..+. ++|+.|+|++|+|++..|..|++|++|+.|+|++|+|++..+..+..+..+..+++++|.|.+
T Consensus 19 ~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~ 95 (174)
T 2r9u_A 19 CQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKS 95 (174)
T ss_dssp CCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred eCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccce
Confidence 4566675 6777664 677888888888876667777778888888888888876555555566677777777777776
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 96 l~~ 98 (174)
T 2r9u_A 96 IPR 98 (174)
T ss_dssp CCT
T ss_pred eCH
Confidence 544
No 264
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.77 E-value=2.7e-10 Score=131.97 Aligned_cols=82 Identities=23% Similarity=0.099 Sum_probs=57.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCccccccc-CCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLA-GFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~-~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|.|++..|..|+.+++|++|+|++|+|++.+|..+. .|++|+.|+|++|.|++..+. .....+..+++++|.|.
T Consensus 127 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~--~~l~~L~~L~Ls~N~l~ 204 (487)
T 3oja_A 127 LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ--VVFAKLKTLDLSSNKLA 204 (487)
T ss_dssp CCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC--CCCTTCCEEECCSSCCC
T ss_pred CCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccccc--ccCCCCCEEECCCCCCC
Confidence 567777777777777788888888888888877777765 677777777777777765332 24566667777777777
Q ss_pred CCCCc
Q 002857 80 GGIPE 84 (873)
Q Consensus 80 G~~p~ 84 (873)
+.++.
T Consensus 205 ~~~~~ 209 (487)
T 3oja_A 205 FMGPE 209 (487)
T ss_dssp EECGG
T ss_pred CCCHh
Confidence 65543
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=98.75 E-value=7.1e-09 Score=104.67 Aligned_cols=80 Identities=18% Similarity=0.150 Sum_probs=58.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccc-cccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPE-FLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~-~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
+++|+|+ .||..+.. +|+.|+|++|+|++..|. .|+.+++|++|+|++|+|++.+|..+..+..+..+++++|.|.
T Consensus 15 ~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 91 (192)
T 1w8a_A 15 CTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK 91 (192)
T ss_dssp CTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCC
T ss_pred cCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCC
Confidence 4567775 67776654 778888888888744443 3777888888888888888777777777777777788888777
Q ss_pred CCCC
Q 002857 80 GGIP 83 (873)
Q Consensus 80 G~~p 83 (873)
+.++
T Consensus 92 ~~~~ 95 (192)
T 1w8a_A 92 EISN 95 (192)
T ss_dssp EECS
T ss_pred ccCH
Confidence 6554
No 266
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=98.72 E-value=1.5e-08 Score=104.54 Aligned_cols=83 Identities=14% Similarity=0.098 Sum_probs=59.9
Q ss_pred CCCCccccCcCc-CCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGL-SLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~-~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|+|++..|. .|+.+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+..+..+.+++|.|.
T Consensus 39 L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 118 (220)
T 2v70_A 39 LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIT 118 (220)
T ss_dssp CCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCC
T ss_pred cCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCC
Confidence 567777765443 3677788888888888887655567777788888888888887777766666677777777777777
Q ss_pred CCCC
Q 002857 80 GGIP 83 (873)
Q Consensus 80 G~~p 83 (873)
+.++
T Consensus 119 ~~~~ 122 (220)
T 2v70_A 119 CVGN 122 (220)
T ss_dssp CBCT
T ss_pred eECH
Confidence 6543
No 267
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=98.72 E-value=1.3e-08 Score=103.00 Aligned_cols=81 Identities=22% Similarity=0.193 Sum_probs=57.7
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..+..+..+..+++++|.|.+
T Consensus 38 L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~ 116 (193)
T 2wfh_A 38 LDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISV 116 (193)
T ss_dssp CCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred CCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCe
Confidence 4567776 677777777777777777777776555667777777777777777777666666666677777777777765
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 117 ~~ 118 (193)
T 2wfh_A 117 VP 118 (193)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 268
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.71 E-value=3e-09 Score=115.00 Aligned_cols=190 Identities=18% Similarity=0.160 Sum_probs=118.3
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-hcc--ceeeeeeeecccccCCceEEEEE
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-HRK--IIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-HpN--IV~llg~c~~~~~~~~~~~~LV~ 241 (873)
.+.++.|....||+.. ..+++|+.... .....+.+|+++|+.+. +.. +.+++...... ..-...++||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~--~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS--ETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC--SSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC--CCCCcceEEE
Confidence 4568999999999862 45888886422 23467899999999984 332 33444442110 1112347899
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhC------------------------------
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLG------------------------------ 291 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~------------------------------ 291 (873)
++++|.+|.+... ..++..++..++.++++.|+.||..
T Consensus 96 ~~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
T 3sg8_A 96 TKIKGVPLTPLLL------------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSR 163 (304)
T ss_dssp ECCCCEECCHHHH------------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTT
T ss_pred cccCCeECCcccc------------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcc
Confidence 9999988865321 1245556677777777777777741
Q ss_pred -------------------------CCCCeeeccCCCCCeeeCC--CCCeEEecccccccccccccccccc---------
Q 002857 292 -------------------------CKPPIAHCDIKPSNILLND--EMTACVADFGIARFLEATNEQTSSI--------- 335 (873)
Q Consensus 292 -------------------------~s~gIvHrDLKpsNILLd~--~~~vKLsDFGla~~~~~~~~~~~~~--------- 335 (873)
....++|+|+++.||++++ ...+.|+||+.+.......+.....
T Consensus 164 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~ 243 (304)
T 3sg8_A 164 ELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGME 243 (304)
T ss_dssp TSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHH
T ss_pred cCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHH
Confidence 1245899999999999998 5568899999987543211100000
Q ss_pred ---ccccccccCC-CcccCCCCCCcchhhHhHHHHHHHHHhCCCCC
Q 002857 336 ---GVKGTTGYIA-PEYGMGHETSSYGDVYSFGILLLEMFTGLRPS 377 (873)
Q Consensus 336 ---~~~Gt~~Y~A-PE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf 377 (873)
......++.. |+... ......+.|+++.++|.+.+|..+|
T Consensus 244 ~~~~~l~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 244 FVSKILNHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0001111111 22111 1122368999999999999998765
No 269
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.69 E-value=1.7e-08 Score=110.66 Aligned_cols=81 Identities=16% Similarity=0.109 Sum_probs=71.5
Q ss_pred CCC-ccccCcCcCCCCCCCCCeEeCCC-CcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 2 HGN-LFEGPIGLSLSPLRGLKVLDLSQ-NNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 2 s~N-~L~G~iP~~l~~L~~L~~L~Ls~-N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
++| +|+ .||. |+.+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++.+|..+..+..+..++|++|.|.
T Consensus 16 ~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 93 (347)
T 2ifg_A 16 TRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE 93 (347)
T ss_dssp CSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred CCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccc
Confidence 455 788 5999 99999999999996 9999777788999999999999999999999988888889999999999999
Q ss_pred CCCCc
Q 002857 80 GGIPE 84 (873)
Q Consensus 80 G~~p~ 84 (873)
+.++.
T Consensus 94 ~~~~~ 98 (347)
T 2ifg_A 94 SLSWK 98 (347)
T ss_dssp CCCST
T ss_pred eeCHH
Confidence 76544
No 270
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.68 E-value=1.4e-08 Score=111.45 Aligned_cols=79 Identities=22% Similarity=0.105 Sum_probs=69.2
Q ss_pred CCC-CccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHG-NLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~-N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|++|++|+.|+|++|+|++..|..+..+. +..+.+.+|.|.
T Consensus 38 l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 38 IENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 575 999987778899999999999999999998888999999999999999999977666655554 888899999876
Q ss_pred C
Q 002857 80 G 80 (873)
Q Consensus 80 G 80 (873)
.
T Consensus 117 c 117 (347)
T 2ifg_A 117 C 117 (347)
T ss_dssp C
T ss_pred C
Confidence 4
No 271
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=98.66 E-value=2.1e-08 Score=103.46 Aligned_cols=84 Identities=15% Similarity=0.126 Sum_probs=76.3
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|+.+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..+..+..+..+++++|.|.+
T Consensus 64 L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 143 (220)
T 2v70_A 64 FSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITT 143 (220)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCC
T ss_pred CCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCE
Confidence 68899998777799999999999999999998777889999999999999999999989988888889999999999998
Q ss_pred CCCc
Q 002857 81 GIPE 84 (873)
Q Consensus 81 ~~p~ 84 (873)
.++.
T Consensus 144 ~~~~ 147 (220)
T 2v70_A 144 VAPG 147 (220)
T ss_dssp BCTT
T ss_pred ECHH
Confidence 7543
No 272
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=98.66 E-value=3.5e-08 Score=98.29 Aligned_cols=82 Identities=16% Similarity=0.067 Sum_probs=71.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|++|++|++|+|++|+|++..+..|.+|++|++|+|++|+|++..+..+..+..+..+++++|.+..
T Consensus 40 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 40 LNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred eCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCccc
Confidence 68999998889999999999999999999996444567999999999999999997777667778889999999998875
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
..
T Consensus 120 ~~ 121 (174)
T 2r9u_A 120 EC 121 (174)
T ss_dssp TB
T ss_pred cc
Confidence 43
No 273
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=98.65 E-value=3.6e-08 Score=97.62 Aligned_cols=82 Identities=18% Similarity=0.061 Sum_probs=73.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|+.|++|++|+|++|+|++..|..|..|++|++|+|++|+|++..+..+..+..+..+++++|.+..
T Consensus 37 L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 37 LYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 68999998889999999999999999999996655678999999999999999998877778788889999999999876
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
..
T Consensus 117 ~c 118 (170)
T 3g39_A 117 AC 118 (170)
T ss_dssp TB
T ss_pred Cc
Confidence 54
No 274
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=98.65 E-value=3.3e-08 Score=102.05 Aligned_cols=84 Identities=20% Similarity=0.171 Sum_probs=67.3
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|..+++|+.|+|++|+|++..|..|.+|++|++|+|++|+|++..+..+..+..+..+++++|.|.+
T Consensus 39 l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~ 118 (220)
T 2v9t_B 39 LEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINC 118 (220)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCE
Confidence 57888886666678888889999999998887778888888889999999888886555556667778888888888887
Q ss_pred CCCc
Q 002857 81 GIPE 84 (873)
Q Consensus 81 ~~p~ 84 (873)
.++.
T Consensus 119 ~~~~ 122 (220)
T 2v9t_B 119 LRVD 122 (220)
T ss_dssp CCTT
T ss_pred eCHH
Confidence 6543
No 275
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=98.64 E-value=5.1e-08 Score=96.55 Aligned_cols=83 Identities=18% Similarity=0.073 Sum_probs=59.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|+.+++|++|+|++|+|++..+..|+.+++|+.|+|++|+|++..+..+.....+..+++++|.|.+
T Consensus 35 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 114 (177)
T 2o6r_A 35 LESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKS 114 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred eCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceE
Confidence 46777775555556778888888888888875444556778888888888888886666655666677777788887775
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 115 ~~~ 117 (177)
T 2o6r_A 115 VPD 117 (177)
T ss_dssp CCT
T ss_pred eCH
Confidence 443
No 276
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=98.63 E-value=6.3e-09 Score=113.13 Aligned_cols=84 Identities=32% Similarity=0.390 Sum_probs=72.0
Q ss_pred CCCCcccc--CcCcCCCCCCCCCeEeCCC-CcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccc
Q 002857 1 MHGNLFEG--PIGLSLSPLRGLKVLDLSQ-NNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNK 77 (873)
Q Consensus 1 Ls~N~L~G--~iP~~l~~L~~L~~L~Ls~-N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~ 77 (873)
|++|+|+| .+|..|++|++|++|+|++ |+++|.+|..|++|++|++|+|++|+|++.+|..+.....+..+++++|.
T Consensus 57 L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 136 (313)
T 1ogq_A 57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA 136 (313)
T ss_dssp EECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSE
T ss_pred CCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCc
Confidence 46788888 8899999999999999984 88988899889999999999999999988888888888888888899988
Q ss_pred cCCCCCc
Q 002857 78 LCGGIPE 84 (873)
Q Consensus 78 L~G~~p~ 84 (873)
+.+..|.
T Consensus 137 l~~~~p~ 143 (313)
T 1ogq_A 137 LSGTLPP 143 (313)
T ss_dssp EESCCCG
T ss_pred cCCcCCh
Confidence 8876553
No 277
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=98.63 E-value=7.5e-09 Score=112.55 Aligned_cols=82 Identities=30% Similarity=0.484 Sum_probs=76.0
Q ss_pred CCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCCCC
Q 002857 3 GNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCGGI 82 (873)
Q Consensus 3 ~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G~~ 82 (873)
.|+++|.+|.+|++|++|++|+|++|+|+|.+|..|+++++|++|+|++|+|++.+|..+..+..+..+.+++|.+.|..
T Consensus 86 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 165 (313)
T 1ogq_A 86 INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAI 165 (313)
T ss_dssp ETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEEC
T ss_pred CCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcC
Confidence 38999999999999999999999999999999999999999999999999999999999888899999999999998765
Q ss_pred Cc
Q 002857 83 PE 84 (873)
Q Consensus 83 p~ 84 (873)
|.
T Consensus 166 p~ 167 (313)
T 1ogq_A 166 PD 167 (313)
T ss_dssp CG
T ss_pred CH
Confidence 53
No 278
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=98.61 E-value=4.4e-08 Score=99.14 Aligned_cols=80 Identities=25% Similarity=0.173 Sum_probs=71.6
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|.+|++|++|+|++|+|++..|..|..|++|+.|+|++|+|++..+..+..+..+..+.+++|.+..
T Consensus 61 Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 61 LSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 68999998778889999999999999999997777899999999999999999997777667777888899999998753
No 279
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=98.61 E-value=4.6e-08 Score=100.93 Aligned_cols=79 Identities=20% Similarity=0.217 Sum_probs=61.0
Q ss_pred CCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCCC
Q 002857 2 HGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCGG 81 (873)
Q Consensus 2 s~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G~ 81 (873)
++|.|+ .||..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+..+..+..+++++|.|...
T Consensus 19 ~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l 95 (220)
T 2v9t_B 19 RGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITEL 95 (220)
T ss_dssp TTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCC
T ss_pred CCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCcc
Confidence 567777 6777665 6788888888888855556788888888888888888877787777777888888888888755
Q ss_pred CC
Q 002857 82 IP 83 (873)
Q Consensus 82 ~p 83 (873)
++
T Consensus 96 ~~ 97 (220)
T 2v9t_B 96 PK 97 (220)
T ss_dssp CT
T ss_pred CH
Confidence 43
No 280
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.59 E-value=4e-08 Score=115.97 Aligned_cols=77 Identities=25% Similarity=0.248 Sum_probs=65.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++ +|. |+.|++|+.|+|++|+|+ .||..|++|++|+.|+|++|+|++ +| .+..+..+..+++++|.|++
T Consensus 448 Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~ 522 (567)
T 1dce_A 448 LAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQ 522 (567)
T ss_dssp CTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCS
T ss_pred ecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCC
Confidence 67888885 786 889999999999999999 889899999999999999999986 67 66677788888899998887
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 523 ~~ 524 (567)
T 1dce_A 523 SA 524 (567)
T ss_dssp SS
T ss_pred CC
Confidence 63
No 281
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=98.59 E-value=5.4e-08 Score=96.33 Aligned_cols=83 Identities=17% Similarity=0.091 Sum_probs=71.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|+.+++|++|+|++|+|++..|..+..+++|+.|+|++|+|++..+..+.....+..+++++|.+.+
T Consensus 59 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 59 LSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 67899996666668999999999999999997666778999999999999999997666656667788899999999887
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
..+
T Consensus 139 ~~~ 141 (177)
T 2o6r_A 139 SCP 141 (177)
T ss_dssp CHH
T ss_pred cCc
Confidence 543
No 282
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=98.58 E-value=8.3e-08 Score=99.56 Aligned_cols=79 Identities=20% Similarity=0.092 Sum_probs=48.7
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..+..+..+..+.+++|.|.
T Consensus 47 Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 47 LHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT 125 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc
Confidence 4566666655666666666666666666665333344566666666666666666555555555556666666666665
No 283
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=98.55 E-value=1e-07 Score=99.83 Aligned_cols=83 Identities=17% Similarity=0.100 Sum_probs=60.1
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|+++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..+.....+..+++++|.|.+
T Consensus 42 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 121 (251)
T 3m19_A 42 LQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS 121 (251)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred ccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCC
Confidence 46777776666677777777777777777776666667777777777777777776666666666677777777777775
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 122 ~~~ 124 (251)
T 3m19_A 122 LPS 124 (251)
T ss_dssp CCT
T ss_pred cCh
Confidence 443
No 284
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.54 E-value=6.8e-08 Score=92.70 Aligned_cols=79 Identities=15% Similarity=0.083 Sum_probs=71.4
Q ss_pred CCCCccc-cCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFE-GPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~-G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|.++ |.+|..++.+++|+.|+|++|+|++. ..++.+++|++|+|++|+|++.+|..+.....+..+++++|.+.
T Consensus 24 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~ 101 (149)
T 2je0_A 24 LDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101 (149)
T ss_dssp CTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCC
T ss_pred ccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCC
Confidence 5789998 89999999999999999999999965 78999999999999999999888887776788999999999988
Q ss_pred CC
Q 002857 80 GG 81 (873)
Q Consensus 80 G~ 81 (873)
+.
T Consensus 102 ~~ 103 (149)
T 2je0_A 102 DL 103 (149)
T ss_dssp SH
T ss_pred Ch
Confidence 63
No 285
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=98.53 E-value=6.9e-08 Score=105.78 Aligned_cols=80 Identities=15% Similarity=0.091 Sum_probs=54.3
Q ss_pred CCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCCC
Q 002857 2 HGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCGG 81 (873)
Q Consensus 2 s~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G~ 81 (873)
++|+|+ .+|..|+++++|++|+|++|+|+ .+|..++.+++|+.|+|++|++.+.+|..+.....+..+.+++|.+.+.
T Consensus 191 ~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~ 268 (328)
T 4fcg_A 191 EWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT 268 (328)
T ss_dssp EEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCB
T ss_pred cCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhh
Confidence 456666 67777777777777777777777 4666677777777777777777777776666666666666766666655
Q ss_pred CC
Q 002857 82 IP 83 (873)
Q Consensus 82 ~p 83 (873)
+|
T Consensus 269 ~p 270 (328)
T 4fcg_A 269 LP 270 (328)
T ss_dssp CC
T ss_pred cc
Confidence 44
No 286
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=98.52 E-value=1.3e-07 Score=99.06 Aligned_cols=83 Identities=17% Similarity=0.064 Sum_probs=72.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..+.....+..+++++|.|.+
T Consensus 66 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 66 LDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS 145 (251)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCc
Confidence 67899998888889999999999999999997666788999999999999999997777767778888999999999987
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 146 ~~~ 148 (251)
T 3m19_A 146 IPA 148 (251)
T ss_dssp CCT
T ss_pred cCH
Confidence 654
No 287
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=98.50 E-value=1.8e-07 Score=97.03 Aligned_cols=82 Identities=18% Similarity=0.119 Sum_probs=70.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..+..|..|++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+.....+..+++++|.|.+
T Consensus 71 L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 149 (229)
T 3e6j_A 71 LGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKS 149 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCC
T ss_pred CCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCc
Confidence 6889998544456799999999999999999666667899999999999999999 788888888889999999999986
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 150 ~~~ 152 (229)
T 3e6j_A 150 IPH 152 (229)
T ss_dssp CCT
T ss_pred cCH
Confidence 554
No 288
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=98.50 E-value=1.8e-07 Score=94.86 Aligned_cols=83 Identities=19% Similarity=0.082 Sum_probs=67.7
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..+..|+.+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..+.....+..+++++|.+.+
T Consensus 35 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 114 (208)
T 2o6s_A 35 LETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQS 114 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred cCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcc
Confidence 57888986666668899999999999999995555567889999999999999997766666677788888999998886
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 115 ~~~ 117 (208)
T 2o6s_A 115 LPD 117 (208)
T ss_dssp CCT
T ss_pred cCH
Confidence 554
No 289
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=98.50 E-value=2e-07 Score=94.61 Aligned_cols=83 Identities=19% Similarity=0.114 Sum_probs=70.3
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..+.....+..+.+++|.+.+
T Consensus 59 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 138 (208)
T 2o6s_A 59 LGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS 138 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccce
Confidence 57899996555667899999999999999996555668999999999999999998777767777888999999999987
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 139 ~~~ 141 (208)
T 2o6s_A 139 VPD 141 (208)
T ss_dssp CCT
T ss_pred eCH
Confidence 554
No 290
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.49 E-value=7.6e-08 Score=92.40 Aligned_cols=80 Identities=21% Similarity=0.117 Sum_probs=70.7
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCC-CCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESM-IPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~-iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|+|++. ..++.+++|++|+|++|+|++.+|..+..+++|++|+|++|+|++. .|..+.....+..+.+++|.++
T Consensus 49 l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 49 TINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp CTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred CcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 578999965 8899999999999999999988999999999999999999999973 4467777888999999999998
Q ss_pred CCC
Q 002857 80 GGI 82 (873)
Q Consensus 80 G~~ 82 (873)
+.+
T Consensus 127 ~~~ 129 (149)
T 2je0_A 127 NLN 129 (149)
T ss_dssp GST
T ss_pred chH
Confidence 654
No 291
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.47 E-value=5.5e-08 Score=116.19 Aligned_cols=83 Identities=14% Similarity=0.140 Sum_probs=72.2
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCC----------------------------------------------------
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQN---------------------------------------------------- 28 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N---------------------------------------------------- 28 (873)
|++|.|+|.+|++|++|++|++|+|++|
T Consensus 88 L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~ 167 (636)
T 4eco_A 88 LEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCIN 167 (636)
T ss_dssp CTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHH
T ss_pred ecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhh
Confidence 6789999999999999999999999888
Q ss_pred --------------------------cCCCcccccccCCCCcceecccCCCccCC-----------------CCcccc--
Q 002857 29 --------------------------NLSGEIPEFLAGFKFLQNLNLSHNNFESM-----------------IPTEGI-- 63 (873)
Q Consensus 29 --------------------------~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~-----------------iP~~~~-- 63 (873)
+|+| ||.+|++|++|++|+|++|+|+|. +|..+.
T Consensus 168 ~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~ 246 (636)
T 4eco_A 168 SDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWD 246 (636)
T ss_dssp HCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGG
T ss_pred cCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhc
Confidence 4556 899999999999999999999986 888887
Q ss_pred cccCcccccccccccCCCCCc
Q 002857 64 FKNASATSVFGNNKLCGGIPE 84 (873)
Q Consensus 64 ~~~~l~~~~l~nN~L~G~~p~ 84 (873)
.+..+..+.+++|.+.|.+|.
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~ 267 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPT 267 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCT
T ss_pred ccCCCCEEEecCCcCCccChH
Confidence 788888999999998887653
No 292
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.46 E-value=7.1e-08 Score=117.17 Aligned_cols=79 Identities=23% Similarity=0.155 Sum_probs=71.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.|. .||..+++|++|++|+|++|.|+ .||..|++|++|++|+|++|+|+ .+|..+..+..+..+.+++|.|..
T Consensus 231 Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 307 (727)
T 4b8c_D 231 LSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTT 307 (727)
T ss_dssp CTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCC
T ss_pred CCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCc
Confidence 6789998 89999999999999999999999 99999999999999999999999 789888888889999999999874
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 308 lp 309 (727)
T 4b8c_D 308 LP 309 (727)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 293
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.46 E-value=2.5e-07 Score=98.15 Aligned_cols=84 Identities=18% Similarity=0.079 Sum_probs=72.7
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|+.+++|++|+|++|+|++..|..|+.+++|+.|+|++|+|++..|..+.....+..+.+++|.+.+
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 57899997777778999999999999999997666778999999999999999998877777777888999999999998
Q ss_pred CCCc
Q 002857 81 GIPE 84 (873)
Q Consensus 81 ~~p~ 84 (873)
.++.
T Consensus 196 ~~~~ 199 (272)
T 3rfs_A 196 VPDG 199 (272)
T ss_dssp CCTT
T ss_pred cCHH
Confidence 6653
No 294
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=98.45 E-value=1.6e-07 Score=110.19 Aligned_cols=84 Identities=32% Similarity=0.322 Sum_probs=72.5
Q ss_pred CCCCcc-ccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLF-EGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L-~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|++ .+.+|..|..|++|++|+|++|+|++.+|..|.+|++|++|+|++|+|++..|..+..+..+..+++++|.|.
T Consensus 476 Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 555 (635)
T 4g8a_A 476 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 555 (635)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCC
T ss_pred hhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCC
Confidence 466764 4457888999999999999999999888899999999999999999999888888877888899999999998
Q ss_pred CCCCc
Q 002857 80 GGIPE 84 (873)
Q Consensus 80 G~~p~ 84 (873)
+.++.
T Consensus 556 ~~~~~ 560 (635)
T 4g8a_A 556 TSKKQ 560 (635)
T ss_dssp BCCSS
T ss_pred CCCHH
Confidence 87654
No 295
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.45 E-value=2.7e-07 Score=97.89 Aligned_cols=84 Identities=21% Similarity=0.130 Sum_probs=74.6
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.|++..|..|+++++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..|..+.....+..+.+++|.+.+
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 67899998777778999999999999999997777779999999999999999998888777778889999999999997
Q ss_pred CCCc
Q 002857 81 GIPE 84 (873)
Q Consensus 81 ~~p~ 84 (873)
.++.
T Consensus 172 ~~~~ 175 (272)
T 3rfs_A 172 LPEG 175 (272)
T ss_dssp CCTT
T ss_pred cCHH
Confidence 6553
No 296
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.44 E-value=1e-07 Score=93.36 Aligned_cols=79 Identities=19% Similarity=0.072 Sum_probs=71.1
Q ss_pred CCCCccc-cCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFE-GPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~-G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|+++ |.+|..+..+++|+.|+|++|.|++. ..+..+++|++|+|++|+|++.+|..+.....+..+++++|.+.
T Consensus 31 l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 108 (168)
T 2ell_A 31 LDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108 (168)
T ss_dssp CCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCC
T ss_pred CCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccC
Confidence 5789998 88999999999999999999999954 78999999999999999999888887776788899999999998
Q ss_pred CC
Q 002857 80 GG 81 (873)
Q Consensus 80 G~ 81 (873)
+.
T Consensus 109 ~~ 110 (168)
T 2ell_A 109 DI 110 (168)
T ss_dssp SS
T ss_pred cc
Confidence 64
No 297
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=98.43 E-value=1.5e-07 Score=110.45 Aligned_cols=83 Identities=18% Similarity=0.049 Sum_probs=72.4
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|.+|++|++|++|||++|+|++..|..|.+|++|++|+|++|+|++..|..+..+..++.+.+++|.|.+
T Consensus 59 Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~ 138 (635)
T 4g8a_A 59 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS 138 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCC
T ss_pred eeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCC
Confidence 68999997666789999999999999999996556789999999999999999998777777788889999999999987
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 139 l~~ 141 (635)
T 4g8a_A 139 LEN 141 (635)
T ss_dssp STT
T ss_pred CCh
Confidence 554
No 298
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.43 E-value=1.7e-07 Score=110.54 Aligned_cols=81 Identities=23% Similarity=0.223 Sum_probs=74.6
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCC-CcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMI-PTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~i-P~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|+|+ .||..|++|++|+.|+|++|+|++ || .|++|++|+.|+|++|+|++.+ |..+..+..+..+.+++|.|+
T Consensus 470 Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 470 LSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp CCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 6899999 899999999999999999999995 88 8999999999999999999887 998888899999999999999
Q ss_pred CCCCc
Q 002857 80 GGIPE 84 (873)
Q Consensus 80 G~~p~ 84 (873)
+.++.
T Consensus 547 ~~~~~ 551 (567)
T 1dce_A 547 QEEGI 551 (567)
T ss_dssp GSSSC
T ss_pred CCccH
Confidence 86553
No 299
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=98.43 E-value=2.5e-07 Score=101.29 Aligned_cols=83 Identities=16% Similarity=0.139 Sum_probs=77.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++ +|..|+.+++|++|+|++|++.+.+|..++.+++|+.|+|++|++.+.+|..+.....+..+++++|.+.+
T Consensus 213 L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 213 IRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp EESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred ccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 47899994 88899999999999999999999999999999999999999999999999998888999999999999988
Q ss_pred CCCc
Q 002857 81 GIPE 84 (873)
Q Consensus 81 ~~p~ 84 (873)
.+|.
T Consensus 292 ~iP~ 295 (328)
T 4fcg_A 292 RLPS 295 (328)
T ss_dssp CCCG
T ss_pred hccH
Confidence 7765
No 300
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.40 E-value=2.3e-07 Score=102.85 Aligned_cols=82 Identities=21% Similarity=0.041 Sum_probs=61.6
Q ss_pred CCCCccccCcCcCCC-CCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLS-PLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~-~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|+|++..+..|. +|++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..+..+..+..+..+.+++|.|.
T Consensus 46 Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 125 (361)
T 2xot_A 46 LSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIV 125 (361)
T ss_dssp CCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCccc
Confidence 577888865555566 7888888888888888655567888888888888888888766666666777777888888777
Q ss_pred CCC
Q 002857 80 GGI 82 (873)
Q Consensus 80 G~~ 82 (873)
+..
T Consensus 126 ~~~ 128 (361)
T 2xot_A 126 VVD 128 (361)
T ss_dssp EEC
T ss_pred EEC
Confidence 543
No 301
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.40 E-value=4.2e-07 Score=97.78 Aligned_cols=80 Identities=21% Similarity=0.168 Sum_probs=51.1
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++ +|.. +.+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..|..+..+..+..+.+++|.|.+
T Consensus 62 L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ 138 (290)
T 1p9a_G 62 LDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 138 (290)
T ss_dssp CTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC
T ss_pred CCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc
Confidence 45666663 4433 66667777777777776 666666667777777777777766555555556666666666666665
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 139 ~~~ 141 (290)
T 1p9a_G 139 LPP 141 (290)
T ss_dssp CCT
T ss_pred cCh
Confidence 433
No 302
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=9.6e-08 Score=118.04 Aligned_cols=84 Identities=17% Similarity=0.154 Sum_probs=71.3
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeC-CCCcCCCc----------------------------------------------
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDL-SQNNLSGE---------------------------------------------- 33 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~L-s~N~LsG~---------------------------------------------- 33 (873)
|++|+|+|.+|++|++|++|++|+| ++|.|+|.
T Consensus 330 Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~ 409 (876)
T 4ecn_A 330 LAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAIN 409 (876)
T ss_dssp CTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHH
T ss_pred CccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhh
Confidence 6789999999999999999999999 77766655
Q ss_pred ------------------------------ccccccCCCCcceecccCCCccC-----------------CCCcccc--c
Q 002857 34 ------------------------------IPEFLAGFKFLQNLNLSHNNFES-----------------MIPTEGI--F 64 (873)
Q Consensus 34 ------------------------------iP~~l~~L~~L~~L~LS~N~Lsg-----------------~iP~~~~--~ 64 (873)
||..|++|++|+.|+|++|+|+| .+|..+. .
T Consensus 410 ~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~ 489 (876)
T 4ecn_A 410 RNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSN 489 (876)
T ss_dssp TCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG
T ss_pred hCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhcc
Confidence 88889999999999999999998 3888876 7
Q ss_pred ccCcccccccccccCCCCCc
Q 002857 65 KNASATSVFGNNKLCGGIPE 84 (873)
Q Consensus 65 ~~~l~~~~l~nN~L~G~~p~ 84 (873)
+..+..+.+++|.+.|.+|.
T Consensus 490 L~~L~~L~Ls~N~l~~~iP~ 509 (876)
T 4ecn_A 490 LKDLTDVELYNCPNMTQLPD 509 (876)
T ss_dssp CTTCCEEEEESCTTCCSCCG
T ss_pred CCCCCEEECcCCCCCccChH
Confidence 77888889999988887653
No 303
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.38 E-value=1.1e-07 Score=113.45 Aligned_cols=77 Identities=16% Similarity=0.103 Sum_probs=72.8
Q ss_pred CCccccCcCcCCCCCCCCCeEeCCCCcCCCc-----------------cccccc--CCCCcceecccCCCccCCCCcccc
Q 002857 3 GNLFEGPIGLSLSPLRGLKVLDLSQNNLSGE-----------------IPEFLA--GFKFLQNLNLSHNNFESMIPTEGI 63 (873)
Q Consensus 3 ~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~-----------------iP~~l~--~L~~L~~L~LS~N~Lsg~iP~~~~ 63 (873)
+|+|+| ||.+|++|++|++|+|++|+|+|. ||..++ +|++|++|+|++|+++|.+|..+.
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~ 270 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK 270 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh
Confidence 689998 999999999999999999999986 999999 999999999999999999999988
Q ss_pred cccCcccccccccc-cCC
Q 002857 64 FKNASATSVFGNNK-LCG 80 (873)
Q Consensus 64 ~~~~l~~~~l~nN~-L~G 80 (873)
.+..+..+++++|. ++|
T Consensus 271 ~l~~L~~L~Ls~n~~l~~ 288 (636)
T 4eco_A 271 ALPEMQLINVACNRGISG 288 (636)
T ss_dssp TCSSCCEEECTTCTTSCH
T ss_pred cCCCCCEEECcCCCCCcc
Confidence 88999999999998 887
No 304
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.36 E-value=2.6e-07 Score=90.48 Aligned_cols=81 Identities=20% Similarity=0.110 Sum_probs=69.7
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCC-CcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMI-PTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~i-P~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|.|++. ..|+.+++|++|+|++|+|++.+|..+.++++|++|+|++|+|++.. +..+.....+..+.+++|.++
T Consensus 56 l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~ 133 (168)
T 2ell_A 56 LINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVT 133 (168)
T ss_dssp EESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG
T ss_pred CcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCc
Confidence 468899865 88999999999999999999889999989999999999999999743 256667788899999999998
Q ss_pred CCCC
Q 002857 80 GGIP 83 (873)
Q Consensus 80 G~~p 83 (873)
+.++
T Consensus 134 ~~~~ 137 (168)
T 2ell_A 134 NLND 137 (168)
T ss_dssp TSTT
T ss_pred chHH
Confidence 6543
No 305
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.36 E-value=6e-07 Score=96.57 Aligned_cols=82 Identities=26% Similarity=0.213 Sum_probs=69.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|+ .+|..+..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+.....+..+++++|.|.+
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 5788888 789989999999999999999996666789999999999999999997777666677788888999998886
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 163 l~~ 165 (290)
T 1p9a_G 163 LPA 165 (290)
T ss_dssp CCT
T ss_pred cCH
Confidence 554
No 306
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.36 E-value=3.6e-07 Score=103.52 Aligned_cols=83 Identities=18% Similarity=0.076 Sum_probs=60.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++.+|..|+.+++|+.|+|++|+|++..|..|+.+++|+.|+|++|+|++..|..+.....+..+++++|.+.+
T Consensus 282 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 361 (455)
T 3v47_A 282 LSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA 361 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCE
T ss_pred ecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccc
Confidence 46777777777777777777777777777776667777777777777777777777667666666677777777777765
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
..+
T Consensus 362 ~~~ 364 (455)
T 3v47_A 362 LGD 364 (455)
T ss_dssp ECT
T ss_pred cCh
Confidence 533
No 307
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.35 E-value=1.2e-06 Score=95.45 Aligned_cols=137 Identities=19% Similarity=0.165 Sum_probs=96.4
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhh----ccceeeeeeeecccccCCce
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIH----RKIIKVVTACSRVDYQGNDF 236 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~H----pNIV~llg~c~~~~~~~~~~ 236 (873)
.....+.++.|....||+. +..+++|+.... .....+..|.++|..+.+ ..+.+++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 4556788999999999997 456888876421 223568999999999976 223444443 23
Q ss_pred EEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCC------------------------
Q 002857 237 KALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGC------------------------ 292 (873)
Q Consensus 237 ~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~------------------------ 292 (873)
.++||||++|.+|..... ..++..++..++.++++.|+.||...
T Consensus 102 ~~lvme~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQY------------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKK 169 (320)
T ss_dssp SCEEEECCCCBCCCHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHH
T ss_pred cEEEEeecCCcccccccc------------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHH
Confidence 579999999988863321 12445556666777777777776321
Q ss_pred ------------------------------------CCCeeeccCCCCCeeeCCCCCeEEecccccccc
Q 002857 293 ------------------------------------KPPIAHCDIKPSNILLNDEMTACVADFGIARFL 325 (873)
Q Consensus 293 ------------------------------------s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~ 325 (873)
...++|+|+++.|||++.+..+.|+||+.+...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 170 LLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 234599999999999998766799999998643
No 308
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.34 E-value=4.2e-07 Score=97.66 Aligned_cols=82 Identities=17% Similarity=0.185 Sum_probs=61.2
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCC-cccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSG-EIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG-~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|.+++.+|..|+.+++|++|+|++|.+++ .+|..+..+++|+.|+|++|+|++..|..+.....+..+.+++|.+.
T Consensus 133 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (306)
T 2z66_A 133 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 212 (306)
T ss_dssp CTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccC
Confidence 46777777777777778888888888888776 56777777888888888888887776776666667777777777776
Q ss_pred CCC
Q 002857 80 GGI 82 (873)
Q Consensus 80 G~~ 82 (873)
+.+
T Consensus 213 ~~~ 215 (306)
T 2z66_A 213 SLD 215 (306)
T ss_dssp BCC
T ss_pred ccC
Confidence 543
No 309
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.34 E-value=3.9e-07 Score=103.18 Aligned_cols=83 Identities=19% Similarity=0.078 Sum_probs=75.4
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..|..|+.+++|++|+|++|+|++..|..|+++++|++|+|++|+|++..|..+.....+..+++++|.+.+
T Consensus 306 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 306 LAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCcccc
Confidence 67899998888899999999999999999998888999999999999999999999889888888889999999999987
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 386 ~~~ 388 (455)
T 3v47_A 386 VPD 388 (455)
T ss_dssp CCT
T ss_pred CCH
Confidence 554
No 310
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.33 E-value=4e-07 Score=91.83 Aligned_cols=66 Identities=20% Similarity=0.187 Sum_probs=39.0
Q ss_pred cCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccc
Q 002857 12 LSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNK 77 (873)
Q Consensus 12 ~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~ 77 (873)
+.++.+++|++|+|++|+|++..|..|+.|++|++|+|++|++++..|..+.....+..+.+++|.
T Consensus 82 ~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 82 NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 355566666666666666665555566666666666666666665555555555555555565555
No 311
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.32 E-value=3.8e-07 Score=101.04 Aligned_cols=76 Identities=25% Similarity=0.203 Sum_probs=36.9
Q ss_pred CCCccccCcCcCCCCCCCCCeEeCCCCcCCCccccccc-CCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 2 HGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLA-GFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 2 s~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~-~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
++|+|+ .||..+.. .|+.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..+..+..+..+++++|.|.+
T Consensus 26 ~~~~l~-~iP~~~~~--~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~ 102 (361)
T 2xot_A 26 SKQQLP-NVPQSLPS--YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHT 102 (361)
T ss_dssp CSSCCS-SCCSSCCT--TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcC-ccCccCCC--CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCc
Confidence 344444 34544432 345555555555533333444 55555555555555554444444444455555555555543
No 312
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.29 E-value=4.9e-07 Score=109.84 Aligned_cols=70 Identities=21% Similarity=0.158 Sum_probs=49.5
Q ss_pred CcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 9 PIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 9 ~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
..|..|..+++|+.|+|++|.|+ .||..+.+|++|+.|+|++|.|+ .+|..+..+..+..+++++|.|..
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~ 284 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS 284 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSS
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCc
Confidence 34666777888888888888887 77777778888888888888887 677777777777778888887773
No 313
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=98.29 E-value=1.1e-06 Score=93.11 Aligned_cols=83 Identities=19% Similarity=0.081 Sum_probs=67.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..+..|..+++|++|+|++|+|++..|..|+.+++|+.|+|++|+|++..+..+.....+..+.+++|.+.+
T Consensus 92 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 171 (270)
T 2o6q_A 92 VTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR 171 (270)
T ss_dssp CCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE
Confidence 57888886556667889999999999999997777778899999999999999987666666677788888888888887
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 172 ~~~ 174 (270)
T 2o6q_A 172 VPE 174 (270)
T ss_dssp CCT
T ss_pred eCh
Confidence 554
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.28 E-value=2.1e-07 Score=100.76 Aligned_cols=81 Identities=16% Similarity=0.049 Sum_probs=45.6
Q ss_pred CCCCcc-ccCcCcCCC-------CCCCCCeEeCCCCcCCCcccccc--cCCCCcceecccCCCccCCCCcccccc-----
Q 002857 1 MHGNLF-EGPIGLSLS-------PLRGLKVLDLSQNNLSGEIPEFL--AGFKFLQNLNLSHNNFESMIPTEGIFK----- 65 (873)
Q Consensus 1 Ls~N~L-~G~iP~~l~-------~L~~L~~L~Ls~N~LsG~iP~~l--~~L~~L~~L~LS~N~Lsg~iP~~~~~~----- 65 (873)
|++|++ .+.+|..++ ++++|++|+|++|+|+|.+|..+ +.+++|++|+|++|+|++. |..+...
T Consensus 70 L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~ 148 (312)
T 1wwl_A 70 LKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLK 148 (312)
T ss_dssp CCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCC
T ss_pred cccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhc
Confidence 345555 344555554 56666666666666666666554 5666666666666666655 4443333
Q ss_pred cCcccccccccccCCCC
Q 002857 66 NASATSVFGNNKLCGGI 82 (873)
Q Consensus 66 ~~l~~~~l~nN~L~G~~ 82 (873)
..+..+.+++|.+.+.+
T Consensus 149 ~~L~~L~L~~N~l~~~~ 165 (312)
T 1wwl_A 149 PGLKVLSIAQAHSLNFS 165 (312)
T ss_dssp TTCCEEEEESCSCCCCC
T ss_pred CCCcEEEeeCCCCccch
Confidence 45555666666665543
No 315
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.27 E-value=8.5e-07 Score=95.25 Aligned_cols=84 Identities=31% Similarity=0.309 Sum_probs=74.7
Q ss_pred CCCCcccc-CcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEG-PIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G-~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|.+++ .+|..++.+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+.....+..+++++|.+.
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 57899987 68999999999999999999999888899999999999999999999877777777788899999999998
Q ss_pred CCCCc
Q 002857 80 GGIPE 84 (873)
Q Consensus 80 G~~p~ 84 (873)
+..+.
T Consensus 237 ~~~~~ 241 (306)
T 2z66_A 237 TSKKQ 241 (306)
T ss_dssp BCSSS
T ss_pred ccCHH
Confidence 86553
No 316
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.27 E-value=2.8e-07 Score=113.89 Aligned_cols=77 Identities=14% Similarity=0.085 Sum_probs=71.4
Q ss_pred CCccccCcCcCCCCCCCCCeEeCCCCcCCC-----------------ccccccc--CCCCcceecccCCCccCCCCcccc
Q 002857 3 GNLFEGPIGLSLSPLRGLKVLDLSQNNLSG-----------------EIPEFLA--GFKFLQNLNLSHNNFESMIPTEGI 63 (873)
Q Consensus 3 ~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG-----------------~iP~~l~--~L~~L~~L~LS~N~Lsg~iP~~~~ 63 (873)
+|+|+| ||.+|++|++|++|+|++|+|+| .||+.++ +|++|+.|+|++|++.|.+|..+.
T Consensus 434 ~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~ 512 (876)
T 4ecn_A 434 TNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLY 512 (876)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGG
T ss_pred cCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHh
Confidence 588998 99999999999999999999998 4999988 999999999999999999999888
Q ss_pred cccCcccccccccc-cCC
Q 002857 64 FKNASATSVFGNNK-LCG 80 (873)
Q Consensus 64 ~~~~l~~~~l~nN~-L~G 80 (873)
.+..+..+.+++|. |+|
T Consensus 513 ~L~~L~~L~Ls~N~~lsg 530 (876)
T 4ecn_A 513 DLPELQSLNIACNRGISA 530 (876)
T ss_dssp GCSSCCEEECTTCTTSCH
T ss_pred CCCCCCEEECcCCCCccc
Confidence 88899999999997 887
No 317
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.26 E-value=6.6e-07 Score=101.94 Aligned_cols=80 Identities=18% Similarity=0.123 Sum_probs=58.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|++|++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+..+..+..+.+++|.+..
T Consensus 82 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 161 (452)
T 3zyi_A 82 LMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIES 161 (452)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCE
T ss_pred CcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcce
Confidence 56777777667777777777777777777776666777777777777777777776666656666677777777777664
No 318
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.25 E-value=9.1e-07 Score=94.10 Aligned_cols=83 Identities=17% Similarity=0.146 Sum_probs=71.6
Q ss_pred CCCCc-cccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNL-FEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~-L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|. +++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..+.....+..+.+++|.+.
T Consensus 87 l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 87 LSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS 166 (285)
T ss_dssp CCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccc
Confidence 56786 77555888999999999999999999877889999999999999999999877777777888899999999888
Q ss_pred CCCC
Q 002857 80 GGIP 83 (873)
Q Consensus 80 G~~p 83 (873)
+.++
T Consensus 167 ~~~~ 170 (285)
T 1ozn_A 167 SVPE 170 (285)
T ss_dssp EECT
T ss_pred ccCH
Confidence 6544
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=98.25 E-value=1.5e-06 Score=91.99 Aligned_cols=83 Identities=18% Similarity=0.119 Sum_probs=71.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|+...+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..+.....+..+.+++|.+.+
T Consensus 68 l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 147 (270)
T 2o6q_A 68 LNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS 147 (270)
T ss_dssp CCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCc
Confidence 57899995444456899999999999999996666778999999999999999998888877788899999999999987
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 148 ~~~ 150 (270)
T 2o6q_A 148 LPK 150 (270)
T ss_dssp CCT
T ss_pred cCH
Confidence 654
No 320
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.24 E-value=1.4e-06 Score=92.64 Aligned_cols=83 Identities=25% Similarity=0.212 Sum_probs=70.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCC-ccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNN-FESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~-Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|++++..|..|+++++|++|+|++|+|++..|..|..+++|++|+|++|. ++...|..+.....+..+.+++|.+.
T Consensus 39 l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~ 118 (285)
T 1ozn_A 39 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ 118 (285)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred eeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCC
Confidence 57888887666779999999999999999997778899999999999999997 77666777777788888999999888
Q ss_pred CCCC
Q 002857 80 GGIP 83 (873)
Q Consensus 80 G~~p 83 (873)
+.++
T Consensus 119 ~~~~ 122 (285)
T 1ozn_A 119 ELGP 122 (285)
T ss_dssp CCCT
T ss_pred EECH
Confidence 7644
No 321
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.23 E-value=9.6e-07 Score=102.76 Aligned_cols=84 Identities=18% Similarity=0.191 Sum_probs=71.4
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCC-CcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLS-GEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~Ls-G~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|.+++.+|..|..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++|++++..|..+.....+..+.+++|.+.
T Consensus 428 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 507 (570)
T 2z63_A 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK 507 (570)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCC
Confidence 5788888888888889999999999999987 678888899999999999999999888888777788888888888888
Q ss_pred CCCCc
Q 002857 80 GGIPE 84 (873)
Q Consensus 80 G~~p~ 84 (873)
+.++.
T Consensus 508 ~~~~~ 512 (570)
T 2z63_A 508 SVPDG 512 (570)
T ss_dssp CCCTT
T ss_pred CCCHH
Confidence 76543
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.22 E-value=1e-06 Score=93.19 Aligned_cols=82 Identities=18% Similarity=0.053 Sum_probs=59.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..+..|+++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..+.....+..+.+++|.+.+
T Consensus 35 ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 114 (276)
T 2z62_A 35 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS 114 (276)
T ss_dssp CTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCC
T ss_pred CCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccc
Confidence 46777776555577778888888888888875555677778888888888888877766666666777777777777765
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
..
T Consensus 115 ~~ 116 (276)
T 2z62_A 115 LE 116 (276)
T ss_dssp ST
T ss_pred cC
Confidence 43
No 323
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.22 E-value=1.3e-06 Score=103.48 Aligned_cols=83 Identities=16% Similarity=0.047 Sum_probs=61.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.|++..|..|+.+++|++|+|++|.|++..|..|++|++|++|+|++|.|++..+..+..+..+..+.+++|.+.+
T Consensus 82 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~ 161 (597)
T 3oja_B 82 LNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER 161 (597)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred CCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCC
Confidence 56777777666678888888888888888887666777888888888888888886555555666777777888887776
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 162 ~~~ 164 (597)
T 3oja_B 162 IED 164 (597)
T ss_dssp CCT
T ss_pred CCh
Confidence 554
No 324
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.22 E-value=1.2e-06 Score=103.20 Aligned_cols=82 Identities=23% Similarity=0.133 Sum_probs=72.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..|.+|+++++|++|+|++|+|++..|..|+++++|++|+|++|+|++..|..+.....++.+.+++|.+.+
T Consensus 39 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 118 (606)
T 3vq2_A 39 LSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLAS 118 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCC
T ss_pred CCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccc
Confidence 67889988777789999999999999999997778889999999999999999998888888888888999999998876
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 119 ~~ 120 (606)
T 3vq2_A 119 LE 120 (606)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 325
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.21 E-value=8.1e-07 Score=103.14 Aligned_cols=80 Identities=16% Similarity=-0.002 Sum_probs=62.7
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..|.+|+++++|++|+|++|+|++..|..|+++++|++|+|++|+|++..|..+.....++.+++++|.+.+
T Consensus 33 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 112 (549)
T 2z81_A 33 LSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQT 112 (549)
T ss_dssp CCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSS
T ss_pred CcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccc
Confidence 56778887777778888888888888888887667778888888888888888887777666677777788888887774
No 326
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.21 E-value=1.2e-06 Score=95.18 Aligned_cols=81 Identities=25% Similarity=0.193 Sum_probs=51.3
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..|..|+.+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+ .+|..+.....+..+++++|.+++
T Consensus 199 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 199 LDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp CTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCc
Confidence 4556666555666666666666666666666555556666666666666666666 555555555566666666666665
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 278 ~~ 279 (330)
T 1xku_A 278 IG 279 (330)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 327
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.21 E-value=8.7e-07 Score=104.28 Aligned_cols=81 Identities=19% Similarity=0.068 Sum_probs=72.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..+.....++.+.+++|.+.+
T Consensus 40 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 119 (606)
T 3t6q_A 40 FSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISS 119 (606)
T ss_dssp CTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSC
T ss_pred ccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCccc
Confidence 67899998778899999999999999999998888999999999999999999998888888888888999999998886
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 120 l 120 (606)
T 3t6q_A 120 I 120 (606)
T ss_dssp G
T ss_pred C
Confidence 4
No 328
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.21 E-value=1.5e-06 Score=94.69 Aligned_cols=80 Identities=16% Similarity=0.064 Sum_probs=50.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.+++..|..|..+++|+.|+|++|+|++..|..+..+++|+.|+|++|+|+ .+|..+.....+..+++++|.+.+
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCc
Confidence 4556666555566666666666666666666555556666666666666666666 556555555566666666666664
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 279 ~ 279 (332)
T 2ft3_A 279 V 279 (332)
T ss_dssp C
T ss_pred c
Confidence 4
No 329
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.21 E-value=1e-06 Score=87.25 Aligned_cols=76 Identities=16% Similarity=0.164 Sum_probs=61.1
Q ss_pred CCCCccccCcCcCCCCCC-CCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLR-GLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~-~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|+|+ .+|. +..+. +|++|+|++|+|++ + ..|+.+++|++|+|++|+|++..|..+.....+..+++++|.+.
T Consensus 26 l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 101 (176)
T 1a9n_A 26 LRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101 (176)
T ss_dssp CTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC
T ss_pred eeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC
Confidence 5788888 5654 65555 99999999999995 4 68899999999999999999665555467778888999999885
Q ss_pred C
Q 002857 80 G 80 (873)
Q Consensus 80 G 80 (873)
.
T Consensus 102 ~ 102 (176)
T 1a9n_A 102 E 102 (176)
T ss_dssp C
T ss_pred c
Confidence 4
No 330
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.20 E-value=7.2e-06 Score=88.41 Aligned_cols=78 Identities=12% Similarity=0.033 Sum_probs=60.6
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhc---cceeeeeeeecccccCCceEEE
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHR---KIIKVVTACSRVDYQGNDFKAL 239 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~Hp---NIV~llg~c~~~~~~~~~~~~L 239 (873)
...+.|+.|.++.||++.. .+|+.++||+...........|..|++.|+.+.+. .+.+++++. ..++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~l 87 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTL 87 (288)
T ss_dssp EEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEE
T ss_pred cceeeeCCcchhheEEEEe-CCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEE
Confidence 3467899999999999976 56788999997543333346789999999999875 577777762 2489
Q ss_pred EEeecCCCChh
Q 002857 240 VYEFMPNGSLE 250 (873)
Q Consensus 240 V~Ey~~~GSL~ 250 (873)
||||++++++.
T Consensus 88 vme~l~g~~~~ 98 (288)
T 3d1u_A 88 AMEWVDERPPT 98 (288)
T ss_dssp EEECCCCCCCC
T ss_pred EEEecccCCCC
Confidence 99999998753
No 331
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.20 E-value=1.5e-06 Score=91.97 Aligned_cols=80 Identities=15% Similarity=0.037 Sum_probs=71.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..+..+.....+..+.+++|.+.+
T Consensus 59 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 138 (276)
T 2z62_A 59 LSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 138 (276)
T ss_dssp CTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccce
Confidence 57899997677789999999999999999997777889999999999999999998777677777888999999999886
No 332
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.19 E-value=9.7e-06 Score=85.26 Aligned_cols=141 Identities=16% Similarity=0.105 Sum_probs=95.8
Q ss_pred CCCcceeecccCce-EEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhh-hccceeeeeeeecccccCCceEE
Q 002857 161 GFSSENLIGAGNFA-SVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNII-HRKIIKVVTACSRVDYQGNDFKA 238 (873)
Q Consensus 161 ~f~~~~~LG~G~fG-~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~-HpNIV~llg~c~~~~~~~~~~~~ 238 (873)
+|+. ..+..|..+ .||+.....++..+++|+-.. .....+..|+.+|+.+. +-.+.++++++. ..+..+
T Consensus 26 g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~-----~~~~~~ 96 (272)
T 4gkh_A 26 GYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIR-----TPDDAW 96 (272)
T ss_dssp TCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEE-----ETTEEE
T ss_pred CCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEE-----ECCeEE
Confidence 4443 344556555 699987766778899998652 23467889999999884 334667777753 346789
Q ss_pred EEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhC---------------------------
Q 002857 239 LVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLG--------------------------- 291 (873)
Q Consensus 239 LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~--------------------------- 291 (873)
+|||++++.++.+.... .......++.+++..|+-||.-
T Consensus 97 lvme~l~G~~~~~~~~~--------------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (272)
T 4gkh_A 97 LLTTAIPGKTAFQVLEE--------------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLV 162 (272)
T ss_dssp EEEECCCSEEHHHHHHH--------------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCC
T ss_pred EEEEeeCCccccccccC--------------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhh
Confidence 99999999887765421 1112334555555555555521
Q ss_pred ----------------------------CCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 292 ----------------------------CKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 292 ----------------------------~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
....++|+|+.+.|||+++++.+-|+||+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 163 DASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012379999999999999887778999998864
No 333
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.18 E-value=1.3e-06 Score=99.91 Aligned_cols=82 Identities=16% Similarity=0.071 Sum_probs=60.6
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..+..+.....+..+++++|.+.+
T Consensus 39 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~ 118 (477)
T 2id5_A 39 LGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVI 118 (477)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCE
T ss_pred CCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCcccc
Confidence 56777776667777888888888888888876667778888888888888888876555555666777777777777765
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 119 ~~ 120 (477)
T 2id5_A 119 LL 120 (477)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 334
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.17 E-value=1.9e-06 Score=101.42 Aligned_cols=80 Identities=16% Similarity=0.042 Sum_probs=73.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..|.+|++|++|++|+|++|+|++..|..|++|++|++|+|++|.+++..|..+.....++.+++++|.+.+
T Consensus 63 Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 142 (606)
T 3vq2_A 63 LSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHS 142 (606)
T ss_dssp CTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccc
Confidence 67899998888899999999999999999998889999999999999999999998887888888899999999999886
No 335
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.17 E-value=1.2e-06 Score=101.29 Aligned_cols=82 Identities=23% Similarity=0.240 Sum_probs=60.4
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCC--cccccccCCCCcceecccCCCccCCCCcc-cccccCcccccccccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSG--EIPEFLAGFKFLQNLNLSHNNFESMIPTE-GIFKNASATSVFGNNK 77 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG--~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~-~~~~~~l~~~~l~nN~ 77 (873)
|++|++++.+|..|+.+++|+.|+|++|+|++ .+|..++.+++|+.|+|++|++++.+|.. +.....+..+.+++|.
T Consensus 331 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~ 410 (520)
T 2z7x_B 331 FSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNI 410 (520)
T ss_dssp CCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSC
T ss_pred eECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCC
Confidence 56777777777778888888888888888876 56677778888888888888887756654 4455667777777777
Q ss_pred cCCCC
Q 002857 78 LCGGI 82 (873)
Q Consensus 78 L~G~~ 82 (873)
+.+..
T Consensus 411 l~~~~ 415 (520)
T 2z7x_B 411 LTDTI 415 (520)
T ss_dssp CCGGG
T ss_pred CCcch
Confidence 76543
No 336
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.17 E-value=1.6e-06 Score=98.45 Aligned_cols=80 Identities=21% Similarity=0.212 Sum_probs=57.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|++|++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+..+..+..+.+++|.+..
T Consensus 71 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 150 (440)
T 3zyj_A 71 LHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 150 (440)
T ss_dssp CCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCE
T ss_pred ccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccc
Confidence 56777776666777777777777777777776556677777777777777777776555566666677777777777664
No 337
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.15 E-value=1.6e-06 Score=95.26 Aligned_cols=80 Identities=15% Similarity=0.045 Sum_probs=49.6
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..+..|+++++|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..+.....+..+.+++|.+.+
T Consensus 59 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 138 (353)
T 2z80_A 59 LSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT 138 (353)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS
T ss_pred CCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc
Confidence 45666664334466666667777777666665555666666667777777776665444435555566666666666654
No 338
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.15 E-value=2.2e-06 Score=101.41 Aligned_cols=81 Identities=21% Similarity=0.107 Sum_probs=72.3
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.|++..|..|++|++|++|+|++|.|++..|..|+++++|++|+|++|+|++..|..+..+..+..+.+++|.|.+
T Consensus 106 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 106 MGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 68899998888889999999999999999994444457999999999999999999999888888899999999999987
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 186 ~ 186 (597)
T 3oja_B 186 V 186 (597)
T ss_dssp C
T ss_pred c
Confidence 5
No 339
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.14 E-value=1.7e-06 Score=98.20 Aligned_cols=82 Identities=23% Similarity=0.184 Sum_probs=71.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|+ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+.....+..+++++|.|.+
T Consensus 192 L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 192 LAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp CTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred CCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 5788888 677 48999999999999999998888999999999999999999998888888888889999999999987
Q ss_pred CCCc
Q 002857 81 GIPE 84 (873)
Q Consensus 81 ~~p~ 84 (873)
.++.
T Consensus 270 ~~~~ 273 (440)
T 3zyj_A 270 LPHD 273 (440)
T ss_dssp CCTT
T ss_pred cChh
Confidence 6543
No 340
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.14 E-value=8.5e-06 Score=88.27 Aligned_cols=137 Identities=16% Similarity=0.155 Sum_probs=88.9
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhc---cceeeeeeeecccccCCceEEEEE
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHR---KIIKVVTACSRVDYQGNDFKALVY 241 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~Hp---NIV~llg~c~~~~~~~~~~~~LV~ 241 (873)
.+.++.|....||+. +..+++|+.. .......+..|+++|+.+.+. .+.+++.++. ...+..++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~----~~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK----RSDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE----CTTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc----cCCCceEEEE
Confidence 467888999999987 3567888853 122346789999999999753 2455665542 2345578999
Q ss_pred eecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhC------------------------------
Q 002857 242 EFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLG------------------------------ 291 (873)
Q Consensus 242 Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~------------------------------ 291 (873)
||++|.+|.+... ..++..++..++.++++.|+.||.-
T Consensus 93 e~i~G~~l~~~~~------------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~ 160 (306)
T 3tdw_A 93 RKVQGQILGEDGM------------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQV 160 (306)
T ss_dssp ECCCSEECHHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHT
T ss_pred eccCCeECchhhh------------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 9999988865310 0112223333333333333333321
Q ss_pred ---------------------------CCCCeeeccCCCCCeeeCC---CCC-eEEeccccccc
Q 002857 292 ---------------------------CKPPIAHCDIKPSNILLND---EMT-ACVADFGIARF 324 (873)
Q Consensus 292 ---------------------------~s~gIvHrDLKpsNILLd~---~~~-vKLsDFGla~~ 324 (873)
....++|+|+++.|||++. ++. +.|+||+.+..
T Consensus 161 ~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 161 FPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred ccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2456799999999999987 455 48999998864
No 341
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.14 E-value=1.5e-06 Score=101.04 Aligned_cols=83 Identities=17% Similarity=0.168 Sum_probs=71.5
Q ss_pred CCCCccccCcC-cCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCcc-CCCCcccccccCccccccccccc
Q 002857 1 MHGNLFEGPIG-LSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFE-SMIPTEGIFKNASATSVFGNNKL 78 (873)
Q Consensus 1 Ls~N~L~G~iP-~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Ls-g~iP~~~~~~~~l~~~~l~nN~L 78 (873)
|++|.+++..| ..+.++++|++|+|++|.+++.+|..+..+++|+.|+|++|.++ +.+|..+.....+..+++++|.+
T Consensus 403 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l 482 (570)
T 2z63_A 403 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 482 (570)
T ss_dssp CTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred ccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCcc
Confidence 57888887766 46889999999999999999888999999999999999999998 67888888888889999999988
Q ss_pred CCCCC
Q 002857 79 CGGIP 83 (873)
Q Consensus 79 ~G~~p 83 (873)
.+..+
T Consensus 483 ~~~~~ 487 (570)
T 2z63_A 483 EQLSP 487 (570)
T ss_dssp CEECT
T ss_pred ccCCh
Confidence 87644
No 342
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.13 E-value=1.6e-06 Score=98.66 Aligned_cols=82 Identities=17% Similarity=0.159 Sum_probs=72.1
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++ +| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+.....+..+++++|.|.+
T Consensus 203 L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 203 LGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp CTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 57899984 55 58999999999999999998889999999999999999999999888888888889999999999987
Q ss_pred CCCc
Q 002857 81 GIPE 84 (873)
Q Consensus 81 ~~p~ 84 (873)
.++.
T Consensus 281 ~~~~ 284 (452)
T 3zyi_A 281 LPHD 284 (452)
T ss_dssp CCTT
T ss_pred cChH
Confidence 6543
No 343
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.11 E-value=2.4e-06 Score=100.50 Aligned_cols=81 Identities=16% Similarity=0.035 Sum_probs=75.2
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..|.+|+++++|++|+|++|+|++..|..|+++++|++|+|++|+|++..|..+.....+..+.+++|.+.+
T Consensus 64 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~ 143 (606)
T 3t6q_A 64 LTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISS 143 (606)
T ss_dssp CTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCC
T ss_pred CCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccc
Confidence 68899998889999999999999999999998889999999999999999999998777778888889999999999987
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 144 ~ 144 (606)
T 3t6q_A 144 I 144 (606)
T ss_dssp C
T ss_pred c
Confidence 4
No 344
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.11 E-value=3.3e-06 Score=94.00 Aligned_cols=81 Identities=16% Similarity=0.062 Sum_probs=45.2
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.+++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|++|+|+...+..+.....+..+.+++|.+.+
T Consensus 76 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~ 155 (390)
T 3o6n_A 76 LNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER 155 (390)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred CCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCc
Confidence 34555554444456666666666666666665555556666666666666666663333333445555556666665554
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 156 ~ 156 (390)
T 3o6n_A 156 I 156 (390)
T ss_dssp C
T ss_pred c
Confidence 3
No 345
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.11 E-value=2.1e-06 Score=98.18 Aligned_cols=82 Identities=18% Similarity=0.119 Sum_probs=73.3
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..|.+|++|++|++|+|++|+|++..+..|.++++|+.|+|++|++++..|..+.....+..+.+++|.+.+
T Consensus 63 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 142 (477)
T 2id5_A 63 LNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY 142 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCE
T ss_pred CCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccce
Confidence 67899998889999999999999999999995444578999999999999999999989888888899999999998876
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
..
T Consensus 143 ~~ 144 (477)
T 2id5_A 143 IS 144 (477)
T ss_dssp EC
T ss_pred eC
Confidence 44
No 346
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.10 E-value=2.4e-06 Score=92.42 Aligned_cols=78 Identities=21% Similarity=0.141 Sum_probs=61.7
Q ss_pred CCCCcccc--CcCcC-CCCCCCCCeEeCCCCcCCCccc-ccccCCCCcceecccCCCccCCCCcccccccCccccccccc
Q 002857 1 MHGNLFEG--PIGLS-LSPLRGLKVLDLSQNNLSGEIP-EFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNN 76 (873)
Q Consensus 1 Ls~N~L~G--~iP~~-l~~L~~L~~L~Ls~N~LsG~iP-~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN 76 (873)
|++|+|++ .+|.. +.++++|++|+|++|+|++.+| ..+..+++|++|+|++|+|+ .+|..+. ..+..+++++|
T Consensus 208 L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N 284 (312)
T 1wwl_A 208 LRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYN 284 (312)
T ss_dssp CTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSS
T ss_pred CCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCC
Confidence 57888883 34433 4578999999999999998776 56777899999999999998 7777654 67788889999
Q ss_pred ccCCC
Q 002857 77 KLCGG 81 (873)
Q Consensus 77 ~L~G~ 81 (873)
.|.+.
T Consensus 285 ~l~~~ 289 (312)
T 1wwl_A 285 RLDRN 289 (312)
T ss_dssp CCCSC
T ss_pred CCCCC
Confidence 98876
No 347
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.10 E-value=3.3e-06 Score=91.92 Aligned_cols=79 Identities=19% Similarity=0.144 Sum_probs=51.6
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..|.+|+++++|++|+|++|+|++..|..|+++++|++|+|++|+|+ .+|..+. ..+..+.+++|.+.+
T Consensus 61 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~ 137 (332)
T 2ft3_A 61 LQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRK 137 (332)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCC
T ss_pred CCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCc
Confidence 4566666555566777777777777777777666667777777777777777776 4454432 556666677776664
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 138 ~~ 139 (332)
T 2ft3_A 138 VP 139 (332)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 348
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.09 E-value=2.1e-06 Score=99.56 Aligned_cols=82 Identities=23% Similarity=0.221 Sum_probs=72.3
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccC-CCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFES-MIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg-~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|++++..|.+|++|++|++|+|++|+|++..|..|++|++|++|+|++|+|++ .+|..+.....+..+.+++|.+.
T Consensus 57 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~ 136 (549)
T 2z81_A 57 LKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETF 136 (549)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSC
T ss_pred CCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccc
Confidence 68899998888999999999999999999998777789999999999999999997 46777777888899999999855
Q ss_pred CCC
Q 002857 80 GGI 82 (873)
Q Consensus 80 G~~ 82 (873)
+..
T Consensus 137 ~~~ 139 (549)
T 2z81_A 137 SEI 139 (549)
T ss_dssp CEE
T ss_pred ccc
Confidence 443
No 349
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.09 E-value=1.5e-06 Score=93.93 Aligned_cols=80 Identities=11% Similarity=-0.074 Sum_probs=70.2
Q ss_pred CCCCccccCcCcCC--CCCCCCCeEeCCCCcCCCccc----ccccCCCCcceecccCCCccCCCCcccccccCccccccc
Q 002857 1 MHGNLFEGPIGLSL--SPLRGLKVLDLSQNNLSGEIP----EFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFG 74 (873)
Q Consensus 1 Ls~N~L~G~iP~~l--~~L~~L~~L~Ls~N~LsG~iP----~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~ 74 (873)
|++|++++.+|..+ +.+++|++|+|++|++++.+| ..+..+++|++|+|++|+|++..|..+.....+..++++
T Consensus 98 l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 177 (310)
T 4glp_A 98 LEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLS 177 (310)
T ss_dssp EESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECC
T ss_pred eeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECC
Confidence 46899999999998 899999999999999998766 455689999999999999998888888888889999999
Q ss_pred ccccCC
Q 002857 75 NNKLCG 80 (873)
Q Consensus 75 nN~L~G 80 (873)
+|.+.+
T Consensus 178 ~N~l~~ 183 (310)
T 4glp_A 178 DNPGLG 183 (310)
T ss_dssp SCTTCH
T ss_pred CCCCcc
Confidence 998764
No 350
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.08 E-value=3.6e-06 Score=91.45 Aligned_cols=77 Identities=21% Similarity=0.215 Sum_probs=44.1
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..+..|+++++|++|+|++|+|++..|..|+++++|++|+|++|+|+ .+|..+. ..+..+.+++|.+.+
T Consensus 59 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~ 135 (330)
T 1xku_A 59 LQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITK 135 (330)
T ss_dssp CCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCB
T ss_pred CCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccc
Confidence 4556666544445666666666666666666555666666666666666666666 3444322 445555566665554
No 351
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.08 E-value=2.1e-06 Score=99.21 Aligned_cols=78 Identities=18% Similarity=0.078 Sum_probs=68.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..|.+|.++++|++|+|++|+|++..|..|++|++|++|+|++|+|+ .+|.. ....+..+++++|.+.+
T Consensus 28 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~ 104 (520)
T 2z7x_B 28 ISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDA 104 (520)
T ss_dssp CCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSS
T ss_pred CCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCcccc
Confidence 6789999877789999999999999999999888999999999999999999999 56766 56778899999999886
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 105 ~ 105 (520)
T 2z7x_B 105 L 105 (520)
T ss_dssp C
T ss_pred c
Confidence 3
No 352
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.08 E-value=2e-06 Score=106.02 Aligned_cols=81 Identities=16% Similarity=0.032 Sum_probs=58.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcc-cccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEI-PEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~i-P~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|++++..|.+|++|++|++|+|++|.+.+.| |..|++|++|++|+|++|+|++..|..+..+..+..+.+++|.+.
T Consensus 31 Ls~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 110 (844)
T 3j0a_A 31 LSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLS 110 (844)
T ss_dssp EESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCS
T ss_pred CCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCC
Confidence 4667777666777777777777777777666666 566777777777777777777777777666677777777777776
Q ss_pred CC
Q 002857 80 GG 81 (873)
Q Consensus 80 G~ 81 (873)
+.
T Consensus 111 ~~ 112 (844)
T 3j0a_A 111 DA 112 (844)
T ss_dssp SC
T ss_pred cc
Confidence 53
No 353
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.06 E-value=3.4e-06 Score=103.93 Aligned_cols=82 Identities=16% Similarity=0.134 Sum_probs=58.4
Q ss_pred CCCCccccCc-CcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcc--cccccCcccccccccc
Q 002857 1 MHGNLFEGPI-GLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTE--GIFKNASATSVFGNNK 77 (873)
Q Consensus 1 Ls~N~L~G~i-P~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~--~~~~~~l~~~~l~nN~ 77 (873)
|++|.+.+.| |.+|++|++|++|+|++|+|++..|..|++|++|++|+|++|+|++.+|.. +..+..+..+++++|.
T Consensus 55 Ls~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~ 134 (844)
T 3j0a_A 55 LGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQ 134 (844)
T ss_dssp ECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCC
T ss_pred CCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCc
Confidence 3556566666 666777777777777777777777777777777777777777777766654 5556667777777777
Q ss_pred cCCCC
Q 002857 78 LCGGI 82 (873)
Q Consensus 78 L~G~~ 82 (873)
+.+..
T Consensus 135 l~~~~ 139 (844)
T 3j0a_A 135 IRSLY 139 (844)
T ss_dssp CCCCC
T ss_pred ccccc
Confidence 76643
No 354
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.04 E-value=5.2e-06 Score=92.34 Aligned_cols=80 Identities=23% Similarity=0.156 Sum_probs=72.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCccccc-ccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEF-LAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~-l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|++++..|..|+++++|++|+|++|+|+ .+|.. |+++++|++|+|++|+|++..|..+.....+..+.+++|.+.
T Consensus 100 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 100 MGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred CCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 6789999888888999999999999999999 67765 699999999999999999888888888888999999999988
Q ss_pred CC
Q 002857 80 GG 81 (873)
Q Consensus 80 G~ 81 (873)
+.
T Consensus 179 ~~ 180 (390)
T 3o6n_A 179 HV 180 (390)
T ss_dssp BC
T ss_pred cc
Confidence 64
No 355
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.04 E-value=2.9e-07 Score=92.92 Aligned_cols=77 Identities=26% Similarity=0.290 Sum_probs=68.4
Q ss_pred CCCCccccCcCc------CCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCccccccc
Q 002857 1 MHGNLFEGPIGL------SLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFG 74 (873)
Q Consensus 1 Ls~N~L~G~iP~------~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~ 74 (873)
|+.|.|+|.+|. .|+.+++|++|+|++|+|++ +| .+..+++|+.|+|++|+|+ .+|..+.....+..++++
T Consensus 25 l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~ 101 (198)
T 1ds9_A 25 AEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWIS 101 (198)
T ss_dssp CSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEE
T ss_pred hheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECc
Confidence 567888998888 89999999999999999995 88 8999999999999999999 678776666788899999
Q ss_pred ccccCC
Q 002857 75 NNKLCG 80 (873)
Q Consensus 75 nN~L~G 80 (873)
+|.+.+
T Consensus 102 ~N~l~~ 107 (198)
T 1ds9_A 102 YNQIAS 107 (198)
T ss_dssp EEECCC
T ss_pred CCcCCc
Confidence 998886
No 356
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.04 E-value=1.7e-06 Score=89.72 Aligned_cols=81 Identities=10% Similarity=-0.054 Sum_probs=64.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCc-CCCcccccccCCCCcceecccC-CCccCCCCcccccccCccccccccccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNN-LSGEIPEFLAGFKFLQNLNLSH-NNFESMIPTEGIFKNASATSVFGNNKL 78 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~-LsG~iP~~l~~L~~L~~L~LS~-N~Lsg~iP~~~~~~~~l~~~~l~nN~L 78 (873)
|++|+|++..+..|+.+++|++|+|++|+ +++..+..|.++++|+.|+|++ |+|++..+..+.....+..+.+++|.+
T Consensus 38 l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l 117 (239)
T 2xwt_C 38 LIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGL 117 (239)
T ss_dssp EESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECC
T ss_pred EeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCC
Confidence 46788886555688899999999999997 8744445788999999999998 899876667777777888888998888
Q ss_pred CCC
Q 002857 79 CGG 81 (873)
Q Consensus 79 ~G~ 81 (873)
.+.
T Consensus 118 ~~l 120 (239)
T 2xwt_C 118 KMF 120 (239)
T ss_dssp CSC
T ss_pred ccc
Confidence 863
No 357
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.04 E-value=2.3e-06 Score=86.22 Aligned_cols=77 Identities=8% Similarity=0.002 Sum_probs=59.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.++ .+| .+..+++|++|+|++|.++ . ++.+..+++|+.|+|++|+|++..|..+..+..+..+.+++|.+.+
T Consensus 51 l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~ 126 (197)
T 4ezg_A 51 LANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDD 126 (197)
T ss_dssp EESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBG
T ss_pred ccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCc
Confidence 3567777 677 6888888888888888666 3 3478888888888888888887777777777778888888888776
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 127 ~ 127 (197)
T 4ezg_A 127 S 127 (197)
T ss_dssp G
T ss_pred H
Confidence 3
No 358
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.03 E-value=3.5e-06 Score=98.61 Aligned_cols=82 Identities=21% Similarity=0.292 Sum_probs=55.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCC--cccccccCCCCcceecccCCCccCCCCcc-cccccCcccccccccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSG--EIPEFLAGFKFLQNLNLSHNNFESMIPTE-GIFKNASATSVFGNNK 77 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG--~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~-~~~~~~l~~~~l~nN~ 77 (873)
|++|++++.+|..++++++|+.|+|++|+|++ .+|..++++++|+.|+|++|++++.+|.. +.....+..+.+++|.
T Consensus 360 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~ 439 (562)
T 3a79_B 360 FTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNM 439 (562)
T ss_dssp CCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSC
T ss_pred CCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCC
Confidence 45677777777777777777777777777775 34556777777777777777777655543 4445666667777777
Q ss_pred cCCCC
Q 002857 78 LCGGI 82 (873)
Q Consensus 78 L~G~~ 82 (873)
+.+..
T Consensus 440 l~~~~ 444 (562)
T 3a79_B 440 LTGSV 444 (562)
T ss_dssp CCGGG
T ss_pred CCcch
Confidence 66543
No 359
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.03 E-value=5.1e-06 Score=89.70 Aligned_cols=77 Identities=21% Similarity=0.165 Sum_probs=63.5
Q ss_pred CCCCccccCcCc---C-CCCCCCCCeEeCCCCcCCCcccccccCC---CCcceecccCCCccCCCCcccccccCcccccc
Q 002857 1 MHGNLFEGPIGL---S-LSPLRGLKVLDLSQNNLSGEIPEFLAGF---KFLQNLNLSHNNFESMIPTEGIFKNASATSVF 73 (873)
Q Consensus 1 Ls~N~L~G~iP~---~-l~~L~~L~~L~Ls~N~LsG~iP~~l~~L---~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l 73 (873)
|++|+|+ .+|. . ++++++|++|+|++|+|++.+|..+..+ ++|+.|+|++|+|+ .+|..+. ..+..+++
T Consensus 204 Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~L 279 (310)
T 4glp_A 204 LRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDL 279 (310)
T ss_dssp CCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEEC
T ss_pred CCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEEC
Confidence 5788887 3444 2 5788999999999999998889888887 69999999999999 6777653 67888999
Q ss_pred cccccCCC
Q 002857 74 GNNKLCGG 81 (873)
Q Consensus 74 ~nN~L~G~ 81 (873)
++|.|.+.
T Consensus 280 s~N~l~~~ 287 (310)
T 4glp_A 280 SSNRLNRA 287 (310)
T ss_dssp CSCCCCSC
T ss_pred CCCcCCCC
Confidence 99999874
No 360
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.03 E-value=3.3e-06 Score=98.79 Aligned_cols=75 Identities=24% Similarity=0.164 Sum_probs=40.3
Q ss_pred CCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 2 HGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 2 s~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
++|+|+ .||..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..+.....++.+++++|.|.
T Consensus 39 s~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 113 (562)
T 3a79_B 39 SNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ 113 (562)
T ss_dssp TTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred CCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC
Confidence 455555 2555443 45555555555555444455555555555555555555555555544555555555555554
No 361
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.03 E-value=3.9e-05 Score=85.31 Aligned_cols=77 Identities=13% Similarity=0.119 Sum_probs=56.0
Q ss_pred CcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc--ceeeeeeeecccccCCceEEEE
Q 002857 163 SSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK--IIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 163 ~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN--IV~llg~c~~~~~~~~~~~~LV 240 (873)
...+.|+.|....+|+... ++..+++|+.... ..+..|+.++..+.... +.+++.++. ...+..++|
T Consensus 44 ~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~----~~~g~~~lv 112 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGE----FSESLTYCI 112 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEE----SSSSCEEEE
T ss_pred ceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEecc----CCCCCeEEE
Confidence 3457789999999999875 5778999987421 36889999999986533 455666542 122567999
Q ss_pred EeecCCCChh
Q 002857 241 YEFMPNGSLE 250 (873)
Q Consensus 241 ~Ey~~~GSL~ 250 (873)
|||++|.+|.
T Consensus 113 ~e~l~G~~l~ 122 (362)
T 3ovc_A 113 SRRAQGVTLQ 122 (362)
T ss_dssp EECCCSEETT
T ss_pred EEecCCCCcc
Confidence 9999987664
No 362
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.00 E-value=3.8e-06 Score=83.00 Aligned_cols=75 Identities=19% Similarity=0.149 Sum_probs=40.1
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccc-cccCCCCcceecccCCCccCCCCc--ccccccCcccccccccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPE-FLAGFKFLQNLNLSHNNFESMIPT--EGIFKNASATSVFGNNK 77 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~-~l~~L~~L~~L~LS~N~Lsg~iP~--~~~~~~~l~~~~l~nN~ 77 (873)
|++|+|++ + ..|+.+++|++|+|++|+|+ .+|+ .+..+++|++|+|++|+|+ .+|. .+.....+..+.+++|.
T Consensus 49 Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~ 124 (176)
T 1a9n_A 49 FSDNEIRK-L-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNP 124 (176)
T ss_dssp CCSSCCCE-E-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSG
T ss_pred CCCCCCCc-c-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCC
Confidence 35555554 2 45566666666666666666 3333 2355666666666666664 3443 33344445555555555
Q ss_pred cC
Q 002857 78 LC 79 (873)
Q Consensus 78 L~ 79 (873)
++
T Consensus 125 i~ 126 (176)
T 1a9n_A 125 VT 126 (176)
T ss_dssp GG
T ss_pred CC
Confidence 54
No 363
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=97.99 E-value=3e-06 Score=97.94 Aligned_cols=80 Identities=23% Similarity=0.080 Sum_probs=68.5
Q ss_pred CCCCccccCcCcCCC-CCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLS-PLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~-~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|.|++.+|..++ .|++|+.|+|++|.|++. |. +..+++|+.|+|++|+|++.+|. +.....+..+++++|.|+
T Consensus 151 Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCc
Confidence 689999999999987 899999999999999965 43 44699999999999999986554 667788899999999999
Q ss_pred CCCC
Q 002857 80 GGIP 83 (873)
Q Consensus 80 G~~p 83 (873)
+.++
T Consensus 228 ~lp~ 231 (487)
T 3oja_A 228 LIEK 231 (487)
T ss_dssp EECT
T ss_pred ccch
Confidence 7443
No 364
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=97.99 E-value=4.3e-06 Score=99.83 Aligned_cols=82 Identities=20% Similarity=0.190 Sum_probs=54.1
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++..|..|+++++|++|+|++|.+++..|..|++|++|++|+|++|+|++..+..+.....+..+.+++|.+.+
T Consensus 32 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~ 111 (680)
T 1ziw_A 32 LTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQK 111 (680)
T ss_dssp CCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC
T ss_pred CCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCc
Confidence 45666665555567777777777777777776666667777777777777777775444455566666667777766655
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 112 ~~ 113 (680)
T 1ziw_A 112 IK 113 (680)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 365
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=97.99 E-value=6.8e-06 Score=98.15 Aligned_cols=83 Identities=22% Similarity=0.134 Sum_probs=72.1
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccc-cccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPE-FLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~-~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|.+++..|..|++|++|++|+|++|+|+ .+|. .|+++++|++|+|++|++++..|..+.....+..+.+++|.+.
T Consensus 56 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 134 (680)
T 1ziw_A 56 VGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLS 134 (680)
T ss_dssp CCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCS
T ss_pred CCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCccc
Confidence 5789999888999999999999999999999 5554 7999999999999999999887788888888999999999988
Q ss_pred CCCCc
Q 002857 80 GGIPE 84 (873)
Q Consensus 80 G~~p~ 84 (873)
+.++.
T Consensus 135 ~~~~~ 139 (680)
T 1ziw_A 135 STKLG 139 (680)
T ss_dssp CCCCC
T ss_pred ccCch
Confidence 76543
No 366
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=97.95 E-value=6e-06 Score=90.63 Aligned_cols=80 Identities=24% Similarity=0.156 Sum_probs=66.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCC-cccccccCcccccccccc-c
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIP-TEGIFKNASATSVFGNNK-L 78 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP-~~~~~~~~l~~~~l~nN~-L 78 (873)
|++|++++..|..|+++++|++|+|++|+|++..+..|+++++|++|+|++|+|++..+ ..+.....+..+.+++|. +
T Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~ 162 (353)
T 2z80_A 83 LTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTF 162 (353)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSC
T ss_pred CCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccc
Confidence 67899998788899999999999999999995444459999999999999999995444 356677888899998884 4
Q ss_pred CC
Q 002857 79 CG 80 (873)
Q Consensus 79 ~G 80 (873)
.+
T Consensus 163 ~~ 164 (353)
T 2z80_A 163 TK 164 (353)
T ss_dssp CE
T ss_pred cc
Confidence 43
No 367
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.95 E-value=4e-05 Score=84.18 Aligned_cols=85 Identities=9% Similarity=-0.029 Sum_probs=57.0
Q ss_pred ceee-cccCceEEEEEEEc---C---CCcEEEEEEeeccC---CcchhHHHHHHHHHHhhhh---ccceeeeeeeecccc
Q 002857 165 ENLI-GAGNFASVYKGILF---E---GAPAVAIKVFNFLH---HDASKSFTVECEVMRNIIH---RKIIKVVTACSRVDY 231 (873)
Q Consensus 165 ~~~L-G~G~fG~VYkg~~~---~---~g~~VAVK~l~~~~---~~~~~~f~~Ei~iL~~L~H---pNIV~llg~c~~~~~ 231 (873)
.+.| +.|....+|+.... . ++..+++|+..... ......+..|+.+|+.+.. -.+.+++.++....
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~- 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD- 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST-
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC-
Confidence 4677 88999999998653 1 15678899865322 1123568899999999953 24677887753211
Q ss_pred cCCceEEEEEeecCCCChhh
Q 002857 232 QGNDFKALVYEFMPNGSLEE 251 (873)
Q Consensus 232 ~~~~~~~LV~Ey~~~GSL~~ 251 (873)
..+..++||||++|..+.+
T Consensus 104 -~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 -VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp -TTSSCEEEEECCCCBCCCB
T ss_pred -ccCCceEEEEecCCCChhh
Confidence 1134689999999877764
No 368
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.85 E-value=3.9e-05 Score=85.73 Aligned_cols=76 Identities=17% Similarity=0.075 Sum_probs=49.8
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCC-------cchhHHHHHHHHHHhhhh--cc-ceeeeeeeecccccCC
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHH-------DASKSFTVECEVMRNIIH--RK-IIKVVTACSRVDYQGN 234 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~-------~~~~~f~~Ei~iL~~L~H--pN-IV~llg~c~~~~~~~~ 234 (873)
.+.||.|.++.||++....+++.++||....... .....+..|+++|+.+.. +. +.+++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------~ 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------T 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-------T
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-------C
Confidence 4689999999999997655677899998642211 123567889999998853 33 44555441 2
Q ss_pred ceEEEEEeecCCC
Q 002857 235 DFKALVYEFMPNG 247 (873)
Q Consensus 235 ~~~~LV~Ey~~~G 247 (873)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 2347999999764
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=97.82 E-value=1.9e-05 Score=83.46 Aligned_cols=73 Identities=19% Similarity=0.288 Sum_probs=45.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.++ .+| .++.+++|+.|+|++|+|++ +|. +..+++|+.|+|++|+|++ +|.... ..+..+++++|.+.+
T Consensus 48 l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~ 120 (263)
T 1xeu_A 48 GDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD 120 (263)
T ss_dssp CTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB
T ss_pred CcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEccCCccCC
Confidence 4566666 455 56667777777777777773 443 6677777777777777765 333222 556666666666664
No 370
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=97.82 E-value=7.3e-06 Score=88.84 Aligned_cols=78 Identities=14% Similarity=-0.040 Sum_probs=52.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccc-cccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGI-FKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~-~~~~l~~~~l~nN~L~ 79 (873)
|++|++++..+.. +++|+.|+|++|+|++..|..++.+++|+.|+|++|+|++..|..+. ....+..+.+++|.+.
T Consensus 106 l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 182 (317)
T 3o53_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (317)
T ss_dssp CCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc
Confidence 4566666543332 56677777777777766666777777777777777777766665543 4466677777777766
Q ss_pred CC
Q 002857 80 GG 81 (873)
Q Consensus 80 G~ 81 (873)
+.
T Consensus 183 ~~ 184 (317)
T 3o53_A 183 DV 184 (317)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 371
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=97.79 E-value=1.4e-05 Score=87.10 Aligned_cols=79 Identities=22% Similarity=0.201 Sum_probs=67.2
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.+++ + +.+..+++|++|+|++|++++ +| .+..+++|+.|+|++|++++..|..+.....+..+.+++|.+.+
T Consensus 250 l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 250 IGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp CCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred CCCCccCC-C-hhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 57888885 4 468899999999999999995 54 58899999999999999998888888778888999999999987
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 326 ~~~ 328 (347)
T 4fmz_A 326 IRP 328 (347)
T ss_dssp CGG
T ss_pred ccC
Confidence 654
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=97.77 E-value=2.1e-05 Score=83.28 Aligned_cols=74 Identities=20% Similarity=0.154 Sum_probs=52.4
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++ +|.... ++|+.|+|++|+|++ +| .+..+++|+.|+|++|+|++. | .+.....+..+.+++|.+.+
T Consensus 92 L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 56777774 555333 788888888888884 44 577888888888888888764 3 34556677777788887775
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 165 ~ 165 (263)
T 1xeu_A 165 T 165 (263)
T ss_dssp C
T ss_pred h
Confidence 4
No 373
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=97.76 E-value=4.8e-06 Score=88.91 Aligned_cols=67 Identities=25% Similarity=0.244 Sum_probs=55.1
Q ss_pred CCCCCCCeEeCCCCcCCC--cccccccCCCCcceecccCCCccCCCCccccccc--CcccccccccccCCCCC
Q 002857 15 SPLRGLKVLDLSQNNLSG--EIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKN--ASATSVFGNNKLCGGIP 83 (873)
Q Consensus 15 ~~L~~L~~L~Ls~N~LsG--~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~--~l~~~~l~nN~L~G~~p 83 (873)
.+|++|+.|+||+|+|++ .||..+..+++|+.|+||+|+|++. ..+..+. .+..+.+.+|.+++..+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 568999999999999998 6778889999999999999999975 2223333 67888999999987544
No 374
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=97.76 E-value=2.8e-05 Score=91.77 Aligned_cols=69 Identities=25% Similarity=0.311 Sum_probs=54.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|+ .|| +.+++|++|+|++|+|++ ||. |.+ +|+.|+|++|+|++ +|. ....+..+++++|.|.+
T Consensus 87 Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~ 154 (571)
T 3cvr_A 87 ITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM 154 (571)
T ss_dssp CCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc
Confidence 5788888 688 457888888888888885 887 665 88888888888887 665 45667778888888876
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 155 l 155 (571)
T 3cvr_A 155 L 155 (571)
T ss_dssp C
T ss_pred C
Confidence 3
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=97.76 E-value=6.6e-07 Score=90.30 Aligned_cols=75 Identities=27% Similarity=0.258 Sum_probs=66.5
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++ +| .++.+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +| .+.....+..+++++|.+.+
T Consensus 55 ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~ 129 (198)
T 1ds9_A 55 LSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN 129 (198)
T ss_dssp CSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC
T ss_pred CCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc
Confidence 57899986 88 8999999999999999999 899999999999999999999997 56 45566778889999998875
No 376
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=97.74 E-value=2.7e-05 Score=84.23 Aligned_cols=76 Identities=24% Similarity=0.286 Sum_probs=56.4
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++ +|. ++.+++|++|+|++|+|++ +|. ++.+++|+.|+|++|+|++..+ +.....+..+.+++|.+.+
T Consensus 114 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 56788875 554 8888888888888888884 443 7888888888888888886444 5556677777888887776
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 188 ~~ 189 (308)
T 1h6u_A 188 IS 189 (308)
T ss_dssp CG
T ss_pred Ch
Confidence 44
No 377
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=97.74 E-value=3.5e-05 Score=82.67 Aligned_cols=74 Identities=19% Similarity=0.180 Sum_probs=48.7
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.++ .+| .+..+++|+.|+|++|+|++ +|. +.++++|+.|+|++|+|++ +|. +.....+..+.+++|.+.+
T Consensus 53 l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~n~i~~ 126 (291)
T 1h6t_A 53 ANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSLEHNGISD 126 (291)
T ss_dssp CTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEECTTSCCCC
T ss_pred ccCCCcc-cCh-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEECCCCcCCC
Confidence 4566666 344 37777777777777777774 443 7777777777777777775 333 4455666677777777665
No 378
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=97.73 E-value=2e-05 Score=85.39 Aligned_cols=79 Identities=24% Similarity=0.131 Sum_probs=64.8
Q ss_pred CCCCccccCcCcCCC-CCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 1 MHGNLFEGPIGLSLS-PLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~-~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
|++|.+++..|..+. .+++|++|+|++|+|+ .+|. +..+++|+.|+|++|+|++..+ .+.....+..+++++|.+.
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~-~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC-EEEC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCcccHHHHhhccCcCCEEECCCCcCc-cccc-ccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCccc
Confidence 678999987788775 7999999999999999 4554 4459999999999999996544 4667788899999999998
Q ss_pred CCC
Q 002857 80 GGI 82 (873)
Q Consensus 80 G~~ 82 (873)
+.+
T Consensus 228 ~l~ 230 (317)
T 3o53_A 228 LIE 230 (317)
T ss_dssp EEC
T ss_pred chh
Confidence 543
No 379
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=97.73 E-value=1.6e-05 Score=82.24 Aligned_cols=78 Identities=14% Similarity=0.133 Sum_probs=55.1
Q ss_pred CCCCccccCcCcCCCCCCCCC---eEeCCCC-cCCCcccccccCCCCcc-eecccCCCccCCCCcccccccCcccccccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLK---VLDLSQN-NLSGEIPEFLAGFKFLQ-NLNLSHNNFESMIPTEGIFKNASATSVFGN 75 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~---~L~Ls~N-~LsG~iP~~l~~L~~L~-~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~n 75 (873)
|++|+|++ +|. |+.+++|+ +|+|++| +|++..+..|..+++|+ .|+|++|+|+ .+|........+..+.+++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 35677775 776 77888887 8888888 88844445688888888 8888888888 5555433335667777887
Q ss_pred cc-cCCC
Q 002857 76 NK-LCGG 81 (873)
Q Consensus 76 N~-L~G~ 81 (873)
|. +.+.
T Consensus 189 n~~l~~i 195 (239)
T 2xwt_C 189 NKYLTVI 195 (239)
T ss_dssp CTTCCEE
T ss_pred CCCcccC
Confidence 74 7644
No 380
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.71 E-value=0.00017 Score=77.98 Aligned_cols=152 Identities=15% Similarity=0.128 Sum_probs=82.8
Q ss_pred eeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc--ceeeeeeeeccc-ccCCceEEEEEe
Q 002857 166 NLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK--IIKVVTACSRVD-YQGNDFKALVYE 242 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN--IV~llg~c~~~~-~~~~~~~~LV~E 242 (873)
+.|+.|..+.||+... .+ ..+++|+... ....+..|+.++..|.... +.+++....... ....+..++||+
T Consensus 38 ~~l~gG~~n~~~~v~~-~~-~~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHT-DS-GAVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEE-TT-EEEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEe-CC-CCEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 4566677899999875 33 3589998864 2245566777777775323 344443210000 012456789999
Q ss_pred ecCCCChh--------------hhccccccccc-ccCC---CCCCchhhh------------------------------
Q 002857 243 FMPNGSLE--------------EWIHPITEEDK-RHKA---PGNLNSLER------------------------------ 274 (873)
Q Consensus 243 y~~~GSL~--------------~~L~~~~~~~~-~~~~---~~~Ls~~~~------------------------------ 274 (873)
|++|.++. ..||....... .... ...-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986553 11111100000 0000 001122110
Q ss_pred -HHHHHHHHHHHHHHhh----------CCCCCeeeccCCCCCeeeCCCCCeEEecccccc
Q 002857 275 -LNIAIDVASALEYLHL----------GCKPPIAHCDIKPSNILLNDEMTACVADFGIAR 323 (873)
Q Consensus 275 -l~Ia~qIa~gL~yLH~----------~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~ 323 (873)
..+...+..++.+|+. .....++|+|+++.|||++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111224445666652 025789999999999999888899999999775
No 381
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=97.70 E-value=3.3e-05 Score=82.89 Aligned_cols=77 Identities=25% Similarity=0.303 Sum_probs=61.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++ +|. ++.+++|++|+|++|+|++ + +.+..+++|+.|+|++|+|++. ..+.....+..+.+++|.+.+
T Consensus 97 l~~n~l~~-~~~-l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 97 LDENKVKD-LSS-LKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp CCSSCCCC-GGG-GTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CCCCcCCC-Chh-hccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc
Confidence 57888885 554 8999999999999999985 4 4688899999999999999865 445667778888899998887
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 171 ~~~ 173 (291)
T 1h6t_A 171 IVP 173 (291)
T ss_dssp CGG
T ss_pred chh
Confidence 543
No 382
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=97.70 E-value=3.8e-05 Score=83.03 Aligned_cols=77 Identities=25% Similarity=0.390 Sum_probs=65.3
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++ +| .++.+++|+.|+|++|+|++ +|. +..+++|+.|+|++|+|++..+ +.....+..+.+++|.+.+
T Consensus 92 L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 92 LSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred ccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 67899985 55 69999999999999999995 664 9999999999999999997655 5567788899999999987
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 166 ~~~ 168 (308)
T 1h6u_A 166 LTP 168 (308)
T ss_dssp CGG
T ss_pred Chh
Confidence 543
No 383
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=97.69 E-value=1.8e-05 Score=93.30 Aligned_cols=70 Identities=23% Similarity=0.235 Sum_probs=51.7
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCc-------ccccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNAS-------ATSVF 73 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l-------~~~~l 73 (873)
|++|+|++ ||. .+++|+.|+|++|+|++ ||. |. ++|+.|+|++|+|+ .+|. +.. .+ ..+++
T Consensus 147 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~L 214 (571)
T 3cvr_A 147 ADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRC 214 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEEC
T ss_pred CCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEec
Confidence 56788875 776 57888889999998885 887 66 78888888888888 6666 322 55 77788
Q ss_pred cccccCCCC
Q 002857 74 GNNKLCGGI 82 (873)
Q Consensus 74 ~nN~L~G~~ 82 (873)
++|.|+..+
T Consensus 215 s~N~l~~lp 223 (571)
T 3cvr_A 215 RENRITHIP 223 (571)
T ss_dssp CSSCCCCCC
T ss_pred CCCcceecC
Confidence 888887543
No 384
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=97.66 E-value=1.9e-05 Score=86.77 Aligned_cols=78 Identities=19% Similarity=0.157 Sum_probs=56.4
Q ss_pred CCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccc-cccCCCCcceecccCCCccCCCCcc-cccccC-ccccccccccc
Q 002857 2 HGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPE-FLAGFKFLQNLNLSHNNFESMIPTE-GIFKNA-SATSVFGNNKL 78 (873)
Q Consensus 2 s~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~-~l~~L~~L~~L~LS~N~Lsg~iP~~-~~~~~~-l~~~~l~nN~L 78 (873)
++|+|+ .||..| .++|+.|+|++|+|+ .||+ .|.+|++|++|+|++|++.+.+|.. +..+.. ...+.+++|.|
T Consensus 17 ~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l 92 (350)
T 4ay9_X 17 QESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNL 92 (350)
T ss_dssp ESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTC
T ss_pred cCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcc
Confidence 467787 788877 368899999999998 6764 6888999999999999987777754 333333 34456667777
Q ss_pred CCCCC
Q 002857 79 CGGIP 83 (873)
Q Consensus 79 ~G~~p 83 (873)
...++
T Consensus 93 ~~l~~ 97 (350)
T 4ay9_X 93 LYINP 97 (350)
T ss_dssp CEECT
T ss_pred cccCc
Confidence 75543
No 385
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=97.65 E-value=3.9e-05 Score=91.15 Aligned_cols=75 Identities=21% Similarity=0.257 Sum_probs=61.1
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++ + +.|+.|++|+.|+|++|+|++ + ..|..|++|+.|+|++|+|++..| +..+..+..+.+++|.|.+
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCC-C-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCC-c-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 57888885 4 458889999999999999985 4 678889999999999999988777 5667778888888888876
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 190 l 190 (605)
T 1m9s_A 190 L 190 (605)
T ss_dssp C
T ss_pred C
Confidence 4
No 386
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=97.60 E-value=5e-05 Score=90.28 Aligned_cols=77 Identities=26% Similarity=0.317 Sum_probs=65.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.|++ +| .|+.|++|+.|+|++|+|++ +| .|..|++|+.|+|++|+|++. ..+..+..+..+.+++|.|.+
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 67899985 55 79999999999999999995 54 699999999999999999975 456677888999999999988
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.++
T Consensus 168 ~~~ 170 (605)
T 1m9s_A 168 IVP 170 (605)
T ss_dssp CGG
T ss_pred chh
Confidence 655
No 387
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=97.60 E-value=7e-05 Score=85.68 Aligned_cols=57 Identities=26% Similarity=0.371 Sum_probs=36.7
Q ss_pred CCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 18 RGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 18 ~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
++|++|+|++|+|++ +| .|+++++|++|+|++|+|++ +|... ..+..+.+++|.+.+
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~ 187 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE 187 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc
Confidence 467777777777774 66 47777777777777777765 45432 355566666666665
No 388
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=97.59 E-value=5.3e-05 Score=86.47 Aligned_cols=77 Identities=23% Similarity=0.240 Sum_probs=54.4
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++..| ++.+++|+.|+|++|++++..| +..+++|+.|+|++|++++. + .+.....+..+.+++|.+.+
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~ 367 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-S-SLANLTNINWLSAGHNQISD 367 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCB
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-h-hhccCCCCCEEeCCCCccCc
Confidence 46777775433 7778888888888888886655 67778888888888887764 2 34455666777777777776
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
.+|
T Consensus 368 ~~~ 370 (466)
T 1o6v_A 368 LTP 370 (466)
T ss_dssp CGG
T ss_pred cch
Confidence 554
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=97.59 E-value=1.3e-05 Score=88.47 Aligned_cols=82 Identities=23% Similarity=0.113 Sum_probs=71.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCccc----ccccCCC-CcceecccCCCccCCCCcccccc-----cCccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIP----EFLAGFK-FLQNLNLSHNNFESMIPTEGIFK-----NASAT 70 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP----~~l~~L~-~L~~L~LS~N~Lsg~iP~~~~~~-----~~l~~ 70 (873)
|+.|+++|.+|..+...++|++|+|++|+|++..+ ..|..++ +|+.|+|++|+|++..+..+... ..+..
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 84 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS 84 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCE
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccE
Confidence 67899999999988888889999999999997666 7888999 99999999999998877766554 77889
Q ss_pred ccccccccCCCC
Q 002857 71 SVFGNNKLCGGI 82 (873)
Q Consensus 71 ~~l~nN~L~G~~ 82 (873)
+++++|.+.+..
T Consensus 85 L~Ls~n~l~~~~ 96 (362)
T 3goz_A 85 LNLSGNFLSYKS 96 (362)
T ss_dssp EECCSSCGGGSC
T ss_pred EECcCCcCChHH
Confidence 999999888643
No 390
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=97.57 E-value=5.3e-05 Score=82.45 Aligned_cols=77 Identities=19% Similarity=0.212 Sum_probs=64.3
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.+++ +|. +..+++|+.|+|++|++++ + +.+..+++|+.|+|++|++++. | .+.....+..+.+++|.+.+
T Consensus 228 l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 228 IGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-S-VLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCG
T ss_pred ccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-h-hhcCCCCCCEEECcCCcCCC
Confidence 57899985 555 9999999999999999995 5 4699999999999999999974 4 35567788899999999886
Q ss_pred CCC
Q 002857 81 GIP 83 (873)
Q Consensus 81 ~~p 83 (873)
..+
T Consensus 302 ~~~ 304 (347)
T 4fmz_A 302 EDM 304 (347)
T ss_dssp GGH
T ss_pred cCh
Confidence 543
No 391
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=97.55 E-value=7.1e-05 Score=89.19 Aligned_cols=54 Identities=28% Similarity=0.321 Sum_probs=35.8
Q ss_pred CCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 18 RGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 18 ~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
++|+.|+|++|+|++ || ..+++|+.|+|++|+|+ .+|. ....+..+.+++|.|.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC
Confidence 667777777777773 66 44567777777777777 3454 3455666677777766
No 392
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=97.54 E-value=9.9e-05 Score=84.51 Aligned_cols=71 Identities=24% Similarity=0.207 Sum_probs=40.2
Q ss_pred CCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 2 HGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 2 s~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
++|++.+.+ .++.+++|+.|+|++|+|++ +| ++.+++|+.|+|++|+|++. + +.....+..+++++|.+.+
T Consensus 156 ~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 156 HLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--LNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp TTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC
T ss_pred CCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c--cccCCCCCEEECcCCcccc
Confidence 455455455 35666666666666666664 44 55666666666666666643 1 3334455555566665555
No 393
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=97.53 E-value=1e-05 Score=89.91 Aligned_cols=80 Identities=21% Similarity=0.155 Sum_probs=66.8
Q ss_pred CCCCccc--c---CcCcCCCCCCCCCeEeCCCCcCC----CcccccccCCCCcceecccCCCccCC----CCccccc--c
Q 002857 1 MHGNLFE--G---PIGLSLSPLRGLKVLDLSQNNLS----GEIPEFLAGFKFLQNLNLSHNNFESM----IPTEGIF--K 65 (873)
Q Consensus 1 Ls~N~L~--G---~iP~~l~~L~~L~~L~Ls~N~Ls----G~iP~~l~~L~~L~~L~LS~N~Lsg~----iP~~~~~--~ 65 (873)
|++|+|+ | .+|..+..+++|+.|+|++|.|+ +.+|..|..+++|+.|+|++|+|++. +|..+.. .
T Consensus 194 L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~ 273 (386)
T 2ca6_A 194 MVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLEN 273 (386)
T ss_dssp CCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSS
T ss_pred CcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccC
Confidence 5788887 3 46668999999999999999996 68999999999999999999999876 5555533 6
Q ss_pred cCcccccccccccCC
Q 002857 66 NASATSVFGNNKLCG 80 (873)
Q Consensus 66 ~~l~~~~l~nN~L~G 80 (873)
..+..+.+++|.+.+
T Consensus 274 ~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 274 IGLQTLRLQYNEIEL 288 (386)
T ss_dssp CCCCEEECCSSCCBH
T ss_pred CCeEEEECcCCcCCH
Confidence 778889999998886
No 394
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=97.53 E-value=6.7e-05 Score=85.84 Aligned_cols=55 Identities=24% Similarity=0.277 Sum_probs=34.3
Q ss_pred CCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 18 RGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 18 ~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
++|+.|+|++|+|++ +|.. +++|+.|+|++|+|+ .+|. ....+..+++++|.+.+
T Consensus 317 ~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 317 PSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSS
T ss_pred CcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCc
Confidence 466777777777764 6654 456667777777666 3554 24555666666666665
No 395
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.50 E-value=2.6e-05 Score=84.44 Aligned_cols=78 Identities=14% Similarity=0.103 Sum_probs=62.9
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCc-ccccccCCCCcceecccCCCccCCCCcccccccCccccccccc-cc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGE-IPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNN-KL 78 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~-iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN-~L 78 (873)
|++|.+++.+|. +..+++|++|+|++|.+++. +|..+..+++|+.|+|++|++++.+|..+.....+..+.+++| .+
T Consensus 77 l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l 155 (336)
T 2ast_B 77 CPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGF 155 (336)
T ss_dssp CTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSC
T ss_pred cCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCC
Confidence 467888865554 67889999999999998876 8888889999999999999988877877766777888888887 45
Q ss_pred C
Q 002857 79 C 79 (873)
Q Consensus 79 ~ 79 (873)
.
T Consensus 156 ~ 156 (336)
T 2ast_B 156 S 156 (336)
T ss_dssp C
T ss_pred C
Confidence 4
No 396
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=97.47 E-value=0.00012 Score=83.57 Aligned_cols=76 Identities=29% Similarity=0.370 Sum_probs=47.4
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|++++ + +.+..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..| +.....+..+.+++|.+.+
T Consensus 228 l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~ 301 (466)
T 1o6v_A 228 LNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLED 301 (466)
T ss_dssp CCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSC
T ss_pred CCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccC
Confidence 45666663 3 346667777777777777775443 6667777777777777765444 3445556666666666665
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 302 ~~ 303 (466)
T 1o6v_A 302 IS 303 (466)
T ss_dssp CG
T ss_pred ch
Confidence 43
No 397
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=97.47 E-value=0.00011 Score=84.05 Aligned_cols=73 Identities=19% Similarity=0.019 Sum_probs=61.1
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|+|++ +| ++.+++|+.|+|++|+|++ + .++.+++|+.|+|++|+|++ +| +.....+..+.+++|.|.+
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~-~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITK-L--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSC-C--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCe-e--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 57889986 66 8899999999999999996 4 38899999999999999997 66 5566778888999999987
Q ss_pred CC
Q 002857 81 GI 82 (873)
Q Consensus 81 ~~ 82 (873)
.+
T Consensus 248 ~~ 249 (457)
T 3bz5_A 248 LD 249 (457)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 398
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=97.47 E-value=1.8e-05 Score=87.88 Aligned_cols=81 Identities=22% Similarity=0.184 Sum_probs=69.3
Q ss_pred CCCCccc-cCcC---cCCCCCCCCCeEeCCCCcCC--C---cccccccCCCCcceecccCCCcc----CCCCcccccccC
Q 002857 1 MHGNLFE-GPIG---LSLSPLRGLKVLDLSQNNLS--G---EIPEFLAGFKFLQNLNLSHNNFE----SMIPTEGIFKNA 67 (873)
Q Consensus 1 Ls~N~L~-G~iP---~~l~~L~~L~~L~Ls~N~Ls--G---~iP~~l~~L~~L~~L~LS~N~Ls----g~iP~~~~~~~~ 67 (873)
|++|+|+ +.+| ..|..+++|+.|+|++|+|+ | .+|..+..+++|+.|+|++|.|+ +.+|..+.....
T Consensus 166 L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~ 245 (386)
T 2ca6_A 166 CGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 245 (386)
T ss_dssp CCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCC
Confidence 6789998 5577 57888999999999999998 4 45658999999999999999997 678887777788
Q ss_pred cccccccccccCCC
Q 002857 68 SATSVFGNNKLCGG 81 (873)
Q Consensus 68 l~~~~l~nN~L~G~ 81 (873)
+..+.+++|.+.+.
T Consensus 246 L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 246 LRELGLNDCLLSAR 259 (386)
T ss_dssp CCEEECTTCCCCHH
T ss_pred cCEEECCCCCCchh
Confidence 99999999988753
No 399
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.46 E-value=1.4e-05 Score=86.53 Aligned_cols=80 Identities=23% Similarity=0.098 Sum_probs=69.8
Q ss_pred CCCCccccC-cCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCC-CccC-CCCcccccccCccccccccc-
Q 002857 1 MHGNLFEGP-IGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHN-NFES-MIPTEGIFKNASATSVFGNN- 76 (873)
Q Consensus 1 Ls~N~L~G~-iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N-~Lsg-~iP~~~~~~~~l~~~~l~nN- 76 (873)
|++|.+++. +|..+..+++|++|+|++|++++.+|..|+.+++|++|+|++| .+++ .+|..+.....+..+.+++|
T Consensus 100 L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~ 179 (336)
T 2ast_B 100 LSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCF 179 (336)
T ss_dssp CTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCT
T ss_pred ccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCC
Confidence 578888876 8999999999999999999999999999999999999999999 7886 36766666778888999888
Q ss_pred ccCC
Q 002857 77 KLCG 80 (873)
Q Consensus 77 ~L~G 80 (873)
.+++
T Consensus 180 ~l~~ 183 (336)
T 2ast_B 180 DFTE 183 (336)
T ss_dssp TCCH
T ss_pred CcCh
Confidence 7764
No 400
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=97.44 E-value=5.4e-05 Score=83.21 Aligned_cols=82 Identities=15% Similarity=0.051 Sum_probs=69.8
Q ss_pred CCCCccccCcCc-CCCCCCCCCeEeCCCCcCCCcccc-cccCCCCcce-ecccCCCccCCCCcccccccCcccccccccc
Q 002857 1 MHGNLFEGPIGL-SLSPLRGLKVLDLSQNNLSGEIPE-FLAGFKFLQN-LNLSHNNFESMIPTEGIFKNASATSVFGNNK 77 (873)
Q Consensus 1 Ls~N~L~G~iP~-~l~~L~~L~~L~Ls~N~LsG~iP~-~l~~L~~L~~-L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~ 77 (873)
|++|+|+ .||. +|.+|++|++|+|++|++.+.||. .|.+|++|.. +++++|+|++..|..+..+..+..+.+++|.
T Consensus 37 Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~ 115 (350)
T 4ay9_X 37 FVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTG 115 (350)
T ss_dssp EESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEEC
T ss_pred ccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccc
Confidence 5789999 5665 689999999999999999878885 6789988774 7778899998888888888899999999999
Q ss_pred cCCCCC
Q 002857 78 LCGGIP 83 (873)
Q Consensus 78 L~G~~p 83 (873)
+.+.++
T Consensus 116 l~~~~~ 121 (350)
T 4ay9_X 116 IKHLPD 121 (350)
T ss_dssp CSSCCC
T ss_pred cccCCc
Confidence 986543
No 401
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.41 E-value=0.00013 Score=82.31 Aligned_cols=79 Identities=9% Similarity=0.085 Sum_probs=50.1
Q ss_pred CCCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCCcccCCC---CCCcchhhHhHHHHHHH
Q 002857 293 KPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAPEYGMGH---ETSSYGDVYSFGILLLE 369 (873)
Q Consensus 293 s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~---~~s~ksDVwSfGvvL~E 369 (873)
...++|+|+++.|||++.++ ++|+||+.+..-....+...... .-...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLG-NLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHH-HHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHH-HHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 68899999999999999776 99999999875432211111000 012345666554321 12233556688888888
Q ss_pred HHhC
Q 002857 370 MFTG 373 (873)
Q Consensus 370 LlTG 373 (873)
.+++
T Consensus 309 ~y~~ 312 (420)
T 2pyw_A 309 LFNK 312 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=97.38 E-value=6.7e-05 Score=80.06 Aligned_cols=58 Identities=26% Similarity=0.284 Sum_probs=50.1
Q ss_pred CCCCcccc--CcCcCCCCCCCCCeEeCCCCcCCCcccccccCCC--CcceecccCCCccCCCCc
Q 002857 1 MHGNLFEG--PIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFK--FLQNLNLSHNNFESMIPT 60 (873)
Q Consensus 1 Ls~N~L~G--~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~--~L~~L~LS~N~Lsg~iP~ 60 (873)
|++|+|++ .+|..+..|++|+.|+|++|+|++. ..+..|+ +|+.|+|++|.|++.+|.
T Consensus 177 Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 177 LSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp CTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSS
T ss_pred CCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCc
Confidence 78999998 6778888999999999999999964 4455555 999999999999998874
No 403
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.36 E-value=0.0005 Score=73.25 Aligned_cols=79 Identities=11% Similarity=0.030 Sum_probs=57.3
Q ss_pred CCCcceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhh---ccceeeeeeeecccccCCceE
Q 002857 161 GFSSENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIH---RKIIKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 161 ~f~~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~H---pNIV~llg~c~~~~~~~~~~~ 237 (873)
.......+|.|..+.||+.+. .+|+.|++|+...........|..|+..|+.|.- -.+.+++++. ..
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~ 85 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DR 85 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TT
T ss_pred CeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------Cc
Confidence 345567899999999999986 5678999998764444444578899999999842 2345555541 13
Q ss_pred EEEEeecCCCCh
Q 002857 238 ALVYEFMPNGSL 249 (873)
Q Consensus 238 ~LV~Ey~~~GSL 249 (873)
++||||++.+..
T Consensus 86 ~lv~e~l~~~~~ 97 (288)
T 3f7w_A 86 TLAMEWVDERPP 97 (288)
T ss_dssp EEEEECCCCCCC
T ss_pred eEEEEeecccCC
Confidence 789999987643
No 404
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=97.35 E-value=3.5e-05 Score=85.08 Aligned_cols=82 Identities=18% Similarity=0.085 Sum_probs=68.6
Q ss_pred CCCCccccCcC----cCCCCCC-CCCeEeCCCCcCCCcccccccCC-----CCcceecccCCCccCCCCcccccc-----
Q 002857 1 MHGNLFEGPIG----LSLSPLR-GLKVLDLSQNNLSGEIPEFLAGF-----KFLQNLNLSHNNFESMIPTEGIFK----- 65 (873)
Q Consensus 1 Ls~N~L~G~iP----~~l~~L~-~L~~L~Ls~N~LsG~iP~~l~~L-----~~L~~L~LS~N~Lsg~iP~~~~~~----- 65 (873)
|++|.|++..+ ..|..++ +|++|+|++|+|++..+..|..+ ++|+.|+|++|+|++..+..+...
T Consensus 29 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~ 108 (362)
T 3goz_A 29 LSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIP 108 (362)
T ss_dssp CTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSC
T ss_pred ccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCC
Confidence 67899987666 7788898 99999999999998888888886 999999999999998777754432
Q ss_pred cCcccccccccccCCCC
Q 002857 66 NASATSVFGNNKLCGGI 82 (873)
Q Consensus 66 ~~l~~~~l~nN~L~G~~ 82 (873)
..+..+++++|.+.+..
T Consensus 109 ~~L~~L~Ls~N~l~~~~ 125 (362)
T 3goz_A 109 FTITVLDLGWNDFSSKS 125 (362)
T ss_dssp TTCCEEECCSSCGGGSC
T ss_pred CCccEEECcCCcCCcHH
Confidence 67888999999887543
No 405
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.28 E-value=0.0018 Score=69.65 Aligned_cols=170 Identities=11% Similarity=0.060 Sum_probs=92.1
Q ss_pred ccCHHHHHHhhcCCCc-----ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccc--ee
Q 002857 149 YVSYEALYSATKGFSS-----ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKI--IK 221 (873)
Q Consensus 149 ~~s~~el~~at~~f~~-----~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNI--V~ 221 (873)
.++.+++......|.. .+.|+.|....+|+.... ++ .+++|+.... .....+..|+.++..+....+ .+
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCc
Confidence 4566667666666654 345677888999998763 34 5889987642 123567789999988864333 33
Q ss_pred eeeeeeccc-ccCCceEEEEEeecCCCChhhh--------------cccccccccccCC---CCCCchhhhHH-------
Q 002857 222 VVTACSRVD-YQGNDFKALVYEFMPNGSLEEW--------------IHPITEEDKRHKA---PGNLNSLERLN------- 276 (873)
Q Consensus 222 llg~c~~~~-~~~~~~~~LV~Ey~~~GSL~~~--------------L~~~~~~~~~~~~---~~~Ls~~~~l~------- 276 (873)
++....... ....+..++||+|++|..+... ||..... -.... .....|...+.
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~-~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEG-FEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTT-CCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhcc-CCCcccCccChHHHHHHHHHHHHHHH
Confidence 332210000 0112457899999998654321 1110000 00000 00011221100
Q ss_pred -----HHHHHHHHHHHHhhC----CCCCeeeccCCCCCeeeCCCCCeEEecccccc
Q 002857 277 -----IAIDVASALEYLHLG----CKPPIAHCDIKPSNILLNDEMTACVADFGIAR 323 (873)
Q Consensus 277 -----Ia~qIa~gL~yLH~~----~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~ 323 (873)
+...+...+++|+.. ....++|+|+.+.|||++.+..+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 111244455555521 24579999999999999987666899998875
No 406
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=97.09 E-value=0.00049 Score=81.96 Aligned_cols=70 Identities=20% Similarity=0.198 Sum_probs=48.0
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccCC
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
|++|.|+ .||..+. ++|++|+|++|+|+ .||. .+++|++|+|++|+|++ +|. ....+..+.+++|.|.+
T Consensus 47 ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~ 115 (622)
T 3g06_A 47 VGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH 115 (622)
T ss_dssp CCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC
T ss_pred ecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC
Confidence 4677777 7777766 67788888888777 6776 46777777777777773 554 34555666666666665
Q ss_pred C
Q 002857 81 G 81 (873)
Q Consensus 81 ~ 81 (873)
.
T Consensus 116 l 116 (622)
T 3g06_A 116 L 116 (622)
T ss_dssp C
T ss_pred C
Confidence 3
No 407
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.02 E-value=0.0016 Score=69.84 Aligned_cols=72 Identities=8% Similarity=0.032 Sum_probs=47.1
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccce-eeeeeeecccccCCceEEEEEee
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKII-KVVTACSRVDYQGNDFKALVYEF 243 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNIV-~llg~c~~~~~~~~~~~~LV~Ey 243 (873)
.+.|+.|....+|+. ..+++|+...... ......+|+.+++.+....+. ++++++ .+.-++|+||
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~-------~~~~~~v~e~ 88 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD-------PATGVMVTRY 88 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC-------TTTCCEEEEC
T ss_pred eeEcCCcccccccee------eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE-------CCCCEEEEee
Confidence 678999999999998 4588898764321 123456799999888644444 555542 2223689999
Q ss_pred c-CCCChh
Q 002857 244 M-PNGSLE 250 (873)
Q Consensus 244 ~-~~GSL~ 250 (873)
+ ++.+|.
T Consensus 89 i~~g~~l~ 96 (301)
T 3dxq_A 89 IAGAQTMS 96 (301)
T ss_dssp CTTCEECC
T ss_pred cCCCccCC
Confidence 9 655553
No 408
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.97 E-value=0.0079 Score=65.38 Aligned_cols=76 Identities=11% Similarity=0.080 Sum_probs=58.0
Q ss_pred cceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhh---ccceeeeeeeecccccCCceEEEE
Q 002857 164 SENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIH---RKIIKVVTACSRVDYQGNDFKALV 240 (873)
Q Consensus 164 ~~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~H---pNIV~llg~c~~~~~~~~~~~~LV 240 (873)
..+.|+.|....+|+... ++..+++|+.... ....+..|++.|+.|.. ..+.+++.++. ..+..++|
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~-----~~g~~~lv 109 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGN-----SQGHSFLL 109 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE-----CSSEEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEee-----cCCceEEE
Confidence 356799999999999864 5668889987532 34678999999999853 45777887742 24568999
Q ss_pred EeecCCCCh
Q 002857 241 YEFMPNGSL 249 (873)
Q Consensus 241 ~Ey~~~GSL 249 (873)
|||+++..+
T Consensus 110 me~l~G~~~ 118 (312)
T 3jr1_A 110 LEALNKSKN 118 (312)
T ss_dssp EECCCCCCC
T ss_pred EEeccCCCC
Confidence 999998865
No 409
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.81 E-value=0.0052 Score=69.70 Aligned_cols=74 Identities=16% Similarity=0.220 Sum_probs=51.4
Q ss_pred ceeecccCceEEEEEEEcC-------CCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccc-eeeeeeeecccccCCce
Q 002857 165 ENLIGAGNFASVYKGILFE-------GAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKI-IKVVTACSRVDYQGNDF 236 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~-------~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNI-V~llg~c~~~~~~~~~~ 236 (873)
.+.|+.|....||+..... ++..+++|+.... .....+..|+.+++.+...++ .++++.+ . +
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~-----~-~-- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIF-----S-G-- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-----T-T--
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-----C-C--
Confidence 4678889889999997642 2578999998431 122566789999999965555 5566653 1 1
Q ss_pred EEEEEeecCCCCh
Q 002857 237 KALVYEFMPNGSL 249 (873)
Q Consensus 237 ~~LV~Ey~~~GSL 249 (873)
.+|+||++|.+|
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 389999986554
No 410
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.81 E-value=0.0072 Score=65.09 Aligned_cols=171 Identities=13% Similarity=0.105 Sum_probs=92.0
Q ss_pred CCccCHHHHHHhhcCCCc-----ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc--c
Q 002857 147 FPYVSYEALYSATKGFSS-----ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK--I 219 (873)
Q Consensus 147 ~~~~s~~el~~at~~f~~-----~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN--I 219 (873)
...++.+++..+...|.+ ...|+ |....||+... .+|+.+++|+..... .....+..|+.++..+.... +
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQD-EDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECC-TTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEc-CCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCee
Confidence 344555566555444422 34566 88889998754 345679999986322 23456788999999885433 3
Q ss_pred eeeeeeeeccc-ccCCceEEEEEeecCCCChhh-----------h---cccccccccccCCCCCCchhh-----------
Q 002857 220 IKVVTACSRVD-YQGNDFKALVYEFMPNGSLEE-----------W---IHPITEEDKRHKAPGNLNSLE----------- 273 (873)
Q Consensus 220 V~llg~c~~~~-~~~~~~~~LV~Ey~~~GSL~~-----------~---L~~~~~~~~~~~~~~~Ls~~~----------- 273 (873)
.+++.. .... ....+..++||+|++|..+.. . ||..... ........+++..
T Consensus 85 p~~~~~-~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 162 (328)
T 1zyl_A 85 AAPVAF-NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRK-QLFIHRPTIGLNEYLIEPRKLFED 162 (328)
T ss_dssp CCCCCB-TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTS-SCCSSSCBCSHHHHTHHHHHHHHT
T ss_pred cceeec-CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhcc-CCCccCCCCCHHHHHhhHHHHHhh
Confidence 444432 1000 112456789999998865431 0 1110000 0000011111110
Q ss_pred -----------hHHHHHHHHHHHHHHhh-CCCCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 274 -----------RLNIAIDVASALEYLHL-GCKPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 274 -----------~l~Ia~qIa~gL~yLH~-~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
....+..++..+.-+.. .....++|+|+++.|||++ + .+.|+||+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 163 ATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 01112222222222211 1246789999999999999 4 899999988764
No 411
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=96.78 E-value=0.00012 Score=82.74 Aligned_cols=80 Identities=18% Similarity=0.130 Sum_probs=55.3
Q ss_pred CCCCccccCcCcCCCC-----CCCCCeEeCCCCcCCCc----ccccccCCCCcceecccCCCccCCCCccccc-----cc
Q 002857 1 MHGNLFEGPIGLSLSP-----LRGLKVLDLSQNNLSGE----IPEFLAGFKFLQNLNLSHNNFESMIPTEGIF-----KN 66 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~-----L~~L~~L~Ls~N~LsG~----iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~-----~~ 66 (873)
|++|.+++..+..+.. .++|+.|+|++|.|++. +|..+..+++|+.|+|++|++++..+..+.. ..
T Consensus 291 Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 370 (461)
T 1z7x_W 291 LAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGS 370 (461)
T ss_dssp CTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCC
Confidence 4677776554444433 36888888888888865 6777778888888888888887654443321 34
Q ss_pred CcccccccccccCC
Q 002857 67 ASATSVFGNNKLCG 80 (873)
Q Consensus 67 ~l~~~~l~nN~L~G 80 (873)
.+..+.+++|.+++
T Consensus 371 ~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 371 VLRVLWLADCDVSD 384 (461)
T ss_dssp CCCEEECTTSCCCH
T ss_pred ceEEEECCCCCCCh
Confidence 67777888887763
No 412
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.57 E-value=0.016 Score=66.32 Aligned_cols=76 Identities=17% Similarity=0.130 Sum_probs=49.6
Q ss_pred ceeecccCceEEEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccc-eeeeeeeecccccCCceEEEEEee
Q 002857 165 ENLIGAGNFASVYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKI-IKVVTACSRVDYQGNDFKALVYEF 243 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNI-V~llg~c~~~~~~~~~~~~LV~Ey 243 (873)
.+.|+.|-...+|+.....++..+++|+..... ...-....|+.++..|...++ .++++.+ . + .+||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~-----~-~---G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFF-----T-N---GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEE-----T-T---EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEe-----C-C---eEEEEe
Confidence 467888989999999874334789999875322 112223689999999965555 4566653 1 1 259999
Q ss_pred cCCCChh
Q 002857 244 MPNGSLE 250 (873)
Q Consensus 244 ~~~GSL~ 250 (873)
++|.+|.
T Consensus 183 I~G~~l~ 189 (458)
T 2qg7_A 183 MDGYALS 189 (458)
T ss_dssp CCSEECC
T ss_pred eCCccCC
Confidence 9876553
No 413
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.49 E-value=0.0071 Score=67.58 Aligned_cols=149 Identities=13% Similarity=0.188 Sum_probs=83.1
Q ss_pred eeecccCceEEEEEEEcC-------CCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccc-eeeeeeeecccccCCceE
Q 002857 166 NLIGAGNFASVYKGILFE-------GAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKI-IKVVTACSRVDYQGNDFK 237 (873)
Q Consensus 166 ~~LG~G~fG~VYkg~~~~-------~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNI-V~llg~c~~~~~~~~~~~ 237 (873)
+.|..|-...+|+..... +++.+++|+.... ......+.+|..+++.+.-.++ .++++++ . +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~-----~-~--- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVF-----P-E--- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEE-----T-T---
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEc-----C-C---
Confidence 567778888999987632 3478999986432 2234667799999999854333 4566653 2 1
Q ss_pred EEEEeecCCCChhhh-ccc-------------ccccccccCCCCCCchhhhHHHHHHHHH-------------------H
Q 002857 238 ALVYEFMPNGSLEEW-IHP-------------ITEEDKRHKAPGNLNSLERLNIAIDVAS-------------------A 284 (873)
Q Consensus 238 ~LV~Ey~~~GSL~~~-L~~-------------~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~-------------------g 284 (873)
.+||||++|.+|..- +.. +...+.........-|.++.++..++.. .
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE 205 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence 299999998665421 100 0000000011111123344444433321 2
Q ss_pred HHHH----hh-CCCCCeeeccCCCCCeeeCCC----CCeEEeccccccc
Q 002857 285 LEYL----HL-GCKPPIAHCDIKPSNILLNDE----MTACVADFGIARF 324 (873)
Q Consensus 285 L~yL----H~-~~s~gIvHrDLKpsNILLd~~----~~vKLsDFGla~~ 324 (873)
+..| .. .....++|+|+.+.|||++.+ +.+.|+||..+..
T Consensus 206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2333 21 124578999999999999876 7899999998763
No 414
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=96.40 E-value=0.00036 Score=77.82 Aligned_cols=80 Identities=19% Similarity=0.103 Sum_probs=55.2
Q ss_pred CCCCccccCcCcCC-----CCCCCCCeEeCCCCcCCC----cccccccCCCCcceecccCCCccCC----CCcccccccC
Q 002857 1 MHGNLFEGPIGLSL-----SPLRGLKVLDLSQNNLSG----EIPEFLAGFKFLQNLNLSHNNFESM----IPTEGIFKNA 67 (873)
Q Consensus 1 Ls~N~L~G~iP~~l-----~~L~~L~~L~Ls~N~LsG----~iP~~l~~L~~L~~L~LS~N~Lsg~----iP~~~~~~~~ 67 (873)
|++|+|+..-...| ...++|+.|+|++|.|+. .++..+..+++|++|+|++|+|+.. ++..+.....
T Consensus 133 Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~ 212 (372)
T 3un9_A 133 LQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQ 212 (372)
T ss_dssp CCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSC
T ss_pred cCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCC
Confidence 56787765444444 346788899999998864 3556667888889999999888742 2333344456
Q ss_pred cccccccccccCC
Q 002857 68 SATSVFGNNKLCG 80 (873)
Q Consensus 68 l~~~~l~nN~L~G 80 (873)
+..+++++|.+..
T Consensus 213 L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 213 LQELNVAYNGAGD 225 (372)
T ss_dssp CCEEECCSSCCCH
T ss_pred cCeEECCCCCCCH
Confidence 7788888887753
No 415
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.39 E-value=0.014 Score=64.30 Aligned_cols=75 Identities=19% Similarity=0.190 Sum_probs=46.3
Q ss_pred ceeecccCceEEEEEEEcCC--------CcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccc-eeeeeeeecccccCCc
Q 002857 165 ENLIGAGNFASVYKGILFEG--------APAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKI-IKVVTACSRVDYQGND 235 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~--------g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNI-V~llg~c~~~~~~~~~ 235 (873)
...|+.|....+|+.....+ +..+++|+..... ........|.++++.+...++ .++++.. .
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~-------~- 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF-------N- 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE-------T-
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec-------C-
Confidence 35678888889999876431 2688999875322 112235789999998865554 3666542 1
Q ss_pred eEEEEEeecCCCCh
Q 002857 236 FKALVYEFMPNGSL 249 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL 249 (873)
-++||||++|.++
T Consensus 109 -~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 -GGRIEEWLYGDPL 121 (369)
T ss_dssp -TEEEEECCCSEEC
T ss_pred -CcEEEEEecCCcC
Confidence 2689999987554
No 416
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=96.29 E-value=0.00054 Score=77.28 Aligned_cols=80 Identities=18% Similarity=0.073 Sum_probs=58.9
Q ss_pred CCCCccccCcCcCCC-CCC----CCCeEeCCCCcCCC----cccccccCCCCcceecccCCCccCCCCccccc-----cc
Q 002857 1 MHGNLFEGPIGLSLS-PLR----GLKVLDLSQNNLSG----EIPEFLAGFKFLQNLNLSHNNFESMIPTEGIF-----KN 66 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~-~L~----~L~~L~Ls~N~LsG----~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~-----~~ 66 (873)
|++|.+++..+..+. .++ +|++|+|++|+|+. .+|..|..+++|+.|+|++|.+++..+..+.. ..
T Consensus 63 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 142 (461)
T 1z7x_W 63 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQC 142 (461)
T ss_dssp CTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCC
Confidence 577888765554443 344 79999999999983 67889999999999999999988654443221 23
Q ss_pred CcccccccccccCC
Q 002857 67 ASATSVFGNNKLCG 80 (873)
Q Consensus 67 ~l~~~~l~nN~L~G 80 (873)
.+..+.+++|.+.+
T Consensus 143 ~L~~L~L~~n~l~~ 156 (461)
T 1z7x_W 143 RLEKLQLEYCSLSA 156 (461)
T ss_dssp CCCEEECTTSCCBG
T ss_pred cceEEECCCCCCCH
Confidence 57788888887775
No 417
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.26 E-value=0.017 Score=62.55 Aligned_cols=148 Identities=11% Similarity=0.057 Sum_probs=74.4
Q ss_pred eeecccCceE-EEEEEEcCCCcEEEEEEeeccCCcchhHHHHHHHHHHhhhhcc--ceeeeeeeecccccCCceEEEEEe
Q 002857 166 NLIGAGNFAS-VYKGILFEGAPAVAIKVFNFLHHDASKSFTVECEVMRNIIHRK--IIKVVTACSRVDYQGNDFKALVYE 242 (873)
Q Consensus 166 ~~LG~G~fG~-VYkg~~~~~g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpN--IV~llg~c~~~~~~~~~~~~LV~E 242 (873)
+.|+.|.... +|+... .++..+++|...... ...+..|+.++..+.... +.+++.+. ...+ ++|||
T Consensus 24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d-----~~~g--~ll~e 92 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEE-----HARG--LLLIE 92 (333)
T ss_dssp CC--------CCEEEEC-TTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEE-----TTTT--EEEEC
T ss_pred eECCCCCCCceEEEEEc-CCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeec-----CCCC--EEEEe
Confidence 4566665544 667643 235677777644221 144567888888885433 45566652 1222 68999
Q ss_pred ecCCCChhhhccccccc----------------ccccCCCCCCchhhhH--------------------HHHHHHHHHHH
Q 002857 243 FMPNGSLEEWIHPITEE----------------DKRHKAPGNLNSLERL--------------------NIAIDVASALE 286 (873)
Q Consensus 243 y~~~GSL~~~L~~~~~~----------------~~~~~~~~~Ls~~~~l--------------------~Ia~qIa~gL~ 286 (873)
++.+..+.+++...... .........++..... .....+...+.
T Consensus 93 ~l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 172 (333)
T 3csv_A 93 DLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFA 172 (333)
T ss_dssp CCCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHH
T ss_pred eCCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 99776776554321100 0000000111110000 00011122222
Q ss_pred HHh---hCCCCCeeeccCCCCCeeeCCC----CCeEEeccccccc
Q 002857 287 YLH---LGCKPPIAHCDIKPSNILLNDE----MTACVADFGIARF 324 (873)
Q Consensus 287 yLH---~~~s~gIvHrDLKpsNILLd~~----~~vKLsDFGla~~ 324 (873)
.|. ......++|||+.+.|||++.+ ..+.|+||+.+..
T Consensus 173 ~l~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 173 QILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HHHHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 331 1125689999999999999874 6789999998864
No 418
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.24 E-value=0.0049 Score=58.20 Aligned_cols=51 Identities=20% Similarity=0.294 Sum_probs=38.7
Q ss_pred CCCccc-cCcCcCCCCCCCCCeEeCCCCcCCCccc-ccccCCCCcceecccCCCcc
Q 002857 2 HGNLFE-GPIGLSLSPLRGLKVLDLSQNNLSGEIP-EFLAGFKFLQNLNLSHNNFE 55 (873)
Q Consensus 2 s~N~L~-G~iP~~l~~L~~L~~L~Ls~N~LsG~iP-~~l~~L~~L~~L~LS~N~Ls 55 (873)
+++.|+ ..+|..|. .+|+.|+|++|+|+ .|| ..|..|++|+.|+|++|.+.
T Consensus 16 s~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 16 GRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 466665 45776543 37889999999998 565 46788889999999999886
No 419
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=95.88 E-value=0.0012 Score=73.59 Aligned_cols=80 Identities=15% Similarity=0.035 Sum_probs=58.1
Q ss_pred CCCCccccCcCcCCC-CCCCCCeEeCCCCcCCCcccccc-----cCCCCcceecccCCCccC----CCCcccccccCccc
Q 002857 1 MHGNLFEGPIGLSLS-PLRGLKVLDLSQNNLSGEIPEFL-----AGFKFLQNLNLSHNNFES----MIPTEGIFKNASAT 70 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~-~L~~L~~L~Ls~N~LsG~iP~~l-----~~L~~L~~L~LS~N~Lsg----~iP~~~~~~~~l~~ 70 (873)
|++|.|+..-...+. .|++|+.|+|++|+|+..-...| ...++|+.|+|++|.|+. .++..+.....+..
T Consensus 108 Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~ 187 (372)
T 3un9_A 108 LASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTH 187 (372)
T ss_dssp CTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCE
T ss_pred ecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCE
Confidence 578888755444444 46789999999999985544444 356889999999999974 23333344567888
Q ss_pred ccccccccCC
Q 002857 71 SVFGNNKLCG 80 (873)
Q Consensus 71 ~~l~nN~L~G 80 (873)
+++++|.|..
T Consensus 188 L~Ls~N~l~~ 197 (372)
T 3un9_A 188 LSLLHTGLGD 197 (372)
T ss_dssp EECTTSSCHH
T ss_pred EeCCCCCCCc
Confidence 9999998763
No 420
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.59 E-value=0.051 Score=59.36 Aligned_cols=32 Identities=25% Similarity=0.453 Sum_probs=28.3
Q ss_pred CCCeeeccCCCCCeeeCCCCCeEEeccccccc
Q 002857 293 KPPIAHCDIKPSNILLNDEMTACVADFGIARF 324 (873)
Q Consensus 293 s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~ 324 (873)
...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 46799999999999999888899999988764
No 421
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.30 E-value=0.084 Score=59.31 Aligned_cols=150 Identities=15% Similarity=0.186 Sum_probs=82.9
Q ss_pred ceeecccCceEEEEEEEcC-------CCcEEEEEEeeccCCc------------------chhHHHHHHHHHHhhhhccc
Q 002857 165 ENLIGAGNFASVYKGILFE-------GAPAVAIKVFNFLHHD------------------ASKSFTVECEVMRNIIHRKI 219 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~-------~g~~VAVK~l~~~~~~------------------~~~~f~~Ei~iL~~L~HpNI 219 (873)
.+.|..|-...+|+..... ....|.+++....... ..+....|..+++.+...++
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3567678888999987642 1368999987543211 01123458999998864444
Q ss_pred -eeeeeeeecccccCCceEEEEEeecCCCChhhh-ccc------ccc-----cccccCCCCCCc--hhhhHHHHHHHH--
Q 002857 220 -IKVVTACSRVDYQGNDFKALVYEFMPNGSLEEW-IHP------ITE-----EDKRHKAPGNLN--SLERLNIAIDVA-- 282 (873)
Q Consensus 220 -V~llg~c~~~~~~~~~~~~LV~Ey~~~GSL~~~-L~~------~~~-----~~~~~~~~~~Ls--~~~~l~Ia~qIa-- 282 (873)
.++++++ . + .+|+||+++-+|..- +.. ... ............ +..+.++..++.
T Consensus 137 ~Pkl~~~~-----~-~---G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~ 207 (401)
T 3f2s_A 137 GPKLYGIF-----P-Q---GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRI 207 (401)
T ss_dssp SCCEEEEE-----T-T---EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEe-----C-C---CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhc
Confidence 4566663 2 2 289999997655321 100 000 000000111122 223333332221
Q ss_pred --------------------HHH----HHHhh-CCCCCeeeccCCCCCeeeCCC------CCeEEecccccc
Q 002857 283 --------------------SAL----EYLHL-GCKPPIAHCDIKPSNILLNDE------MTACVADFGIAR 323 (873)
Q Consensus 283 --------------------~gL----~yLH~-~~s~gIvHrDLKpsNILLd~~------~~vKLsDFGla~ 323 (873)
.-+ .+|.. .....++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 208 KFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred cCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 22321 124578999999999999876 789999998875
No 422
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.17 E-value=0.0018 Score=75.50 Aligned_cols=63 Identities=16% Similarity=0.055 Sum_probs=30.4
Q ss_pred CCCCCeEeCCCCcCCC-cccccccCCCCcceecccCCCccCC-CCcccccccCcccccccccccC
Q 002857 17 LRGLKVLDLSQNNLSG-EIPEFLAGFKFLQNLNLSHNNFESM-IPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 17 L~~L~~L~Ls~N~LsG-~iP~~l~~L~~L~~L~LS~N~Lsg~-iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
+++|+.|+|++|++++ .++..+..+++|+.|+|++|.|++. ++..+.....+..+.+++|.++
T Consensus 462 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 462 SPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp CTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred CccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 4555555555555554 2344445555555555555555432 2222223344455555555544
No 423
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=94.86 E-value=0.0048 Score=61.50 Aligned_cols=66 Identities=11% Similarity=0.075 Sum_probs=40.4
Q ss_pred CCCCCCCCeEeCCCC-cCCCc----ccccccCCCCcceecccCCCccCC----CCcccccccCcccccccccccC
Q 002857 14 LSPLRGLKVLDLSQN-NLSGE----IPEFLAGFKFLQNLNLSHNNFESM----IPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 14 l~~L~~L~~L~Ls~N-~LsG~----iP~~l~~L~~L~~L~LS~N~Lsg~----iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
+...++|+.|+|++| .|+.. |...+...++|++|+|++|+|... +...+.....+..+.+++|.+.
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 455677777777777 77532 445566667777777777777531 2222223345666777777655
No 424
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.61 E-value=0.2 Score=51.61 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=77.0
Q ss_pred ChhhhcccccccccccCCCCCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEecccccccccc
Q 002857 248 SLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEA 327 (873)
Q Consensus 248 SL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~ 327 (873)
||.++|.. ...++++.++|.++.|.+.+|.-+-. ...-..+=+.|..|+|..+|.+.+.+ ..+.
T Consensus 34 SL~eIL~~---------~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---- 97 (229)
T 2yle_A 34 SLEEILRL---------YNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD---- 97 (229)
T ss_dssp EHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C-------
T ss_pred cHHHHHHH---------cCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc----
Confidence 78888853 56789999999999999999877621 11111233456889999999888774 1111
Q ss_pred ccccccccccccccccCCCcccCCCCCCcchhhHhHHHHHHHHHhCCCCCCcccccchhhHHHHhhcCchhHHHHhhhhh
Q 002857 328 TNEQTSSIGVKGTTGYIAPEYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLQNWVQSALPERVEEIVDTLF 407 (873)
Q Consensus 328 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~~~~l~~~~~~~~~~~l~elid~~L 407 (873)
.....+.|||... ...+.+.=|||+|++||.-+--..|-+. ...+.+.+..+++.|.
T Consensus 98 ----------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e------------E~eLS~~LE~LL~~Mt 154 (229)
T 2yle_A 98 ----------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE------------ERELSPPLEQLIDHMA 154 (229)
T ss_dssp -------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE------------EECCCHHHHHHHHHHT
T ss_pred ----------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc------------chhhCHHHHHHHHHHH
Confidence 1123466888763 3557888999999999998864333221 1234556777776665
Q ss_pred hh
Q 002857 408 FK 409 (873)
Q Consensus 408 ~~ 409 (873)
..
T Consensus 155 ~~ 156 (229)
T 2yle_A 155 NT 156 (229)
T ss_dssp TC
T ss_pred hc
Confidence 44
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=94.43 E-value=0.039 Score=51.90 Aligned_cols=57 Identities=21% Similarity=0.213 Sum_probs=45.7
Q ss_pred CeEeCCCCcCC-CcccccccCCCCcceecccCCCccCCCCcccccccCcccccccccccC
Q 002857 21 KVLDLSQNNLS-GEIPEFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 21 ~~L~Ls~N~Ls-G~iP~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
..++.++++|+ ..||..|. ++|+.|+|++|+|+...+..+..+..+..+.+++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 48999999997 57886543 47999999999999766666777778888888888653
No 426
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=94.33 E-value=0.005 Score=61.38 Aligned_cols=79 Identities=13% Similarity=0.066 Sum_probs=57.2
Q ss_pred CCCC-ccccC----cCcCCCCCCCCCeEeCCCCcCCCc----ccccccCCCCcceecccCCCccCC----CCcccccccC
Q 002857 1 MHGN-LFEGP----IGLSLSPLRGLKVLDLSQNNLSGE----IPEFLAGFKFLQNLNLSHNNFESM----IPTEGIFKNA 67 (873)
Q Consensus 1 Ls~N-~L~G~----iP~~l~~L~~L~~L~Ls~N~LsG~----iP~~l~~L~~L~~L~LS~N~Lsg~----iP~~~~~~~~ 67 (873)
|++| .|... +...+...++|++|+|++|+|+.. |...+...++|+.|+|++|.|+.. +...+.....
T Consensus 43 L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~ 122 (185)
T 1io0_A 43 LNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTS 122 (185)
T ss_dssp CTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSS
T ss_pred ecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCC
Confidence 4566 66532 455567789999999999999742 556677778999999999999842 3334444556
Q ss_pred cccccc--cccccC
Q 002857 68 SATSVF--GNNKLC 79 (873)
Q Consensus 68 l~~~~l--~nN~L~ 79 (873)
+..+.+ ++|.+.
T Consensus 123 L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 123 LIELRIDNQSQPLG 136 (185)
T ss_dssp CCEEECCCCSSCCC
T ss_pred ceEEEecCCCCCCC
Confidence 788888 667765
No 427
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.01 E-value=0.23 Score=56.19 Aligned_cols=75 Identities=15% Similarity=0.217 Sum_probs=50.1
Q ss_pred ceeecccCceEEEEEEEcCC-------CcEEEEEEeeccCCcchhHHHHHHHHHHhhhhccc-eeeeeeeecccccCCce
Q 002857 165 ENLIGAGNFASVYKGILFEG-------APAVAIKVFNFLHHDASKSFTVECEVMRNIIHRKI-IKVVTACSRVDYQGNDF 236 (873)
Q Consensus 165 ~~~LG~G~fG~VYkg~~~~~-------g~~VAVK~l~~~~~~~~~~f~~Ei~iL~~L~HpNI-V~llg~c~~~~~~~~~~ 236 (873)
.+.|..|-...+|+.....+ +..+++|+..... ...-...+|..+++.+...++ .++++.+ .
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~-----~---- 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF-----P---- 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE-----T----
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc-----C----
Confidence 45677788889999877421 5789999975332 222345789999999864444 4455542 1
Q ss_pred EEEEEeecCCCCh
Q 002857 237 KALVYEFMPNGSL 249 (873)
Q Consensus 237 ~~LV~Ey~~~GSL 249 (873)
-++||||++|.+|
T Consensus 145 ~~~I~efI~G~~l 157 (424)
T 3mes_A 145 EGRIEEFIDGEPL 157 (424)
T ss_dssp TEEEEECCCSEEC
T ss_pred CCEEEEEeCCccC
Confidence 2689999998764
No 428
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=93.62 E-value=0.055 Score=58.36 Aligned_cols=57 Identities=26% Similarity=0.300 Sum_probs=27.3
Q ss_pred CCCCCeEeCCCCcCCCcccc-cccCCCCcceecccCCCccCCCCcccccccCcc-cccccc
Q 002857 17 LRGLKVLDLSQNNLSGEIPE-FLAGFKFLQNLNLSHNNFESMIPTEGIFKNASA-TSVFGN 75 (873)
Q Consensus 17 L~~L~~L~Ls~N~LsG~iP~-~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~-~~~l~n 75 (873)
+++|+.|+|++|+++ .||+ .|.++++|+.|+|++| ++..-+.++.....+. .+.+.+
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~ 283 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA 283 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc
Confidence 455555555555555 4442 4555555555555555 4432233333333343 444433
No 429
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=93.45 E-value=0.0097 Score=69.22 Aligned_cols=66 Identities=17% Similarity=0.173 Sum_probs=36.1
Q ss_pred CCCCCCCeEeCCCCcCCCc----ccccccCCCCcceecccCCCccC----CCCcccccccCcccccccccccCC
Q 002857 15 SPLRGLKVLDLSQNNLSGE----IPEFLAGFKFLQNLNLSHNNFES----MIPTEGIFKNASATSVFGNNKLCG 80 (873)
Q Consensus 15 ~~L~~L~~L~Ls~N~LsG~----iP~~l~~L~~L~~L~LS~N~Lsg----~iP~~~~~~~~l~~~~l~nN~L~G 80 (873)
..+++|++|+|++|.+++. ++..+.++++|+.|+|++|.+++ .++..+.....+..+.+++|.+.+
T Consensus 161 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~ 234 (592)
T 3ogk_B 161 THCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE 234 (592)
T ss_dssp HHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG
T ss_pred hhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH
Confidence 3556666666666666554 44455556666666666666652 222222233455555555555443
No 430
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=92.87 E-value=0.0083 Score=69.77 Aligned_cols=65 Identities=12% Similarity=0.074 Sum_probs=47.4
Q ss_pred CCCCCCCCeEeCCCCcCCCcccccccC-CCCcceecccCCCccCCCCccc-ccccCcccccccccccC
Q 002857 14 LSPLRGLKVLDLSQNNLSGEIPEFLAG-FKFLQNLNLSHNNFESMIPTEG-IFKNASATSVFGNNKLC 79 (873)
Q Consensus 14 l~~L~~L~~L~Ls~N~LsG~iP~~l~~-L~~L~~L~LS~N~Lsg~iP~~~-~~~~~l~~~~l~nN~L~ 79 (873)
+..+++|+.|+|++ ++++..+..++. +++|+.|+|++|.+++..+..+ .....+..+.+++|.++
T Consensus 428 ~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 428 VEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred HhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 56778888888876 777766666766 8888888888888875444333 33566778888888773
No 431
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.63 E-value=0.75 Score=51.21 Aligned_cols=30 Identities=27% Similarity=0.486 Sum_probs=25.0
Q ss_pred CeeeccCCCCCeee------CCCCCeEEeccccccc
Q 002857 295 PIAHCDIKPSNILL------NDEMTACVADFGIARF 324 (873)
Q Consensus 295 gIvHrDLKpsNILL------d~~~~vKLsDFGla~~ 324 (873)
.++|+|+.+.|||+ +++..+.++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567899999988863
No 432
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=91.41 E-value=0.031 Score=61.95 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=40.0
Q ss_pred CCCCCCeEeCCC--CcCCCc-----ccccc--cCCCCcceecccCCCccCCCCcccc---cccCcccccccccccCC
Q 002857 16 PLRGLKVLDLSQ--NNLSGE-----IPEFL--AGFKFLQNLNLSHNNFESMIPTEGI---FKNASATSVFGNNKLCG 80 (873)
Q Consensus 16 ~L~~L~~L~Ls~--N~LsG~-----iP~~l--~~L~~L~~L~LS~N~Lsg~iP~~~~---~~~~l~~~~l~nN~L~G 80 (873)
.|++|+.|+|+. |+..|. |...+ ..+++|++|+|++|.++...+..+. .+..+..+.++.|.|..
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 688888888853 332221 11222 2478888888888888754433322 34567777888877664
No 433
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=90.89 E-value=0.022 Score=66.17 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=50.3
Q ss_pred CCCCCCCeEeCCCCcCCCccccccc-CCCCcceecccCC-CccCC-CCcccccccCcccccccccccCCC
Q 002857 15 SPLRGLKVLDLSQNNLSGEIPEFLA-GFKFLQNLNLSHN-NFESM-IPTEGIFKNASATSVFGNNKLCGG 81 (873)
Q Consensus 15 ~~L~~L~~L~Ls~N~LsG~iP~~l~-~L~~L~~L~LS~N-~Lsg~-iP~~~~~~~~l~~~~l~nN~L~G~ 81 (873)
..+++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++........++.+.+++|.+.+.
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~ 171 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDV 171 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECC
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCc
Confidence 4578899999999999888887776 6889999999988 55532 444444566788888888877653
No 434
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=90.05 E-value=0.024 Score=62.80 Aligned_cols=64 Identities=13% Similarity=0.048 Sum_probs=49.7
Q ss_pred CCCCCCeEeCCCCcCCCccccccc---CCCCcceecccCCCccCC----CCcccccccCcccccccccccC
Q 002857 16 PLRGLKVLDLSQNNLSGEIPEFLA---GFKFLQNLNLSHNNFESM----IPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 16 ~L~~L~~L~Ls~N~LsG~iP~~l~---~L~~L~~L~LS~N~Lsg~----iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
.+++|++|+|++|.++...+..+. .+++|++|+||+|.|++. ++..+.....+..+.+++|.+.
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 579999999999999876655554 588999999999999863 3433344567888888888665
No 435
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=88.91 E-value=0.28 Score=52.68 Aligned_cols=77 Identities=12% Similarity=0.054 Sum_probs=61.8
Q ss_pred CCCCccccCcCcCCCCCCCCCeEeCCCCcCCCccc-ccccCCCCcc-eecccCCCccCCCCcccccccCccccccccccc
Q 002857 1 MHGNLFEGPIGLSLSPLRGLKVLDLSQNNLSGEIP-EFLAGFKFLQ-NLNLSHNNFESMIPTEGIFKNASATSVFGNNKL 78 (873)
Q Consensus 1 Ls~N~L~G~iP~~l~~L~~L~~L~Ls~N~LsG~iP-~~l~~L~~L~-~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN~L 78 (873)
|++|+++..-+.+|.++++|+.|+|++| ++ .|+ ..|.++++|+ .|+|++ +++..-+.++.....+..+.+.+|.+
T Consensus 233 L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i 309 (329)
T 3sb4_A 233 ISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKI 309 (329)
T ss_dssp CTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCC
T ss_pred CCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCcc
Confidence 5678888434456899999999999998 88 566 5799999999 999999 78755566777777888888888877
Q ss_pred CC
Q 002857 79 CG 80 (873)
Q Consensus 79 ~G 80 (873)
..
T Consensus 310 ~~ 311 (329)
T 3sb4_A 310 TT 311 (329)
T ss_dssp CE
T ss_pred Cc
Confidence 64
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=78.60 E-value=0.83 Score=46.11 Aligned_cols=64 Identities=13% Similarity=0.054 Sum_probs=43.8
Q ss_pred CCCCCCeEeCCCC-cCCC----cccccccCCCCcceecccCCCccC----CCCcccccccCcccccccccccC
Q 002857 16 PLRGLKVLDLSQN-NLSG----EIPEFLAGFKFLQNLNLSHNNFES----MIPTEGIFKNASATSVFGNNKLC 79 (873)
Q Consensus 16 ~L~~L~~L~Ls~N-~LsG----~iP~~l~~L~~L~~L~LS~N~Lsg----~iP~~~~~~~~l~~~~l~nN~L~ 79 (873)
+=+.|+.|+|++| +|.. .|-..|..-+.|+.|+|++|+|.. .+...+.....+..+++++|.|.
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3468889999885 7653 245567777889999999998873 22222334456777888888765
No 437
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.07 E-value=4 Score=41.66 Aligned_cols=88 Identities=11% Similarity=0.190 Sum_probs=64.5
Q ss_pred CCCchhhhHHHHHHHHHHHHHHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCC
Q 002857 267 GNLNSLERLNIAIDVASALEYLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAP 346 (873)
Q Consensus 267 ~~Ls~~~~l~Ia~qIa~gL~yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~AP 346 (873)
..++...+++++.+|+....+++ .-+|--|.|+||+++.++.+++.-.|+-..+. |
T Consensus 76 k~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~f~~~~~p~i~~RGik~~l~-------------------P 131 (215)
T 4ann_A 76 KSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELFFTRDGLPIAKTRGLQNVVD-------------------P 131 (215)
T ss_dssp GGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEEECTTSCEEESCCEETTTBS-------------------C
T ss_pred HhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEEEcCCCCEEEEEccCccCCC-------------------C
Confidence 34677889999999999886666 35788899999999999999999888754321 2
Q ss_pred cccCCCCCCcchhhHhHHHHHHHHHhCCCCCCccccc
Q 002857 347 EYGMGHETSSYGDVYSFGILLLEMFTGLRPSDDMFKD 383 (873)
Q Consensus 347 E~l~~~~~s~ksDVwSfGvvL~ELlTGk~Pf~~~~~~ 383 (873)
. ..+...=.-.+=+++..+++++..|+.....
T Consensus 132 ~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 132 L-----PVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp C-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred C-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 1 1112122345778899999999998775443
No 438
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.33 E-value=0.28 Score=56.01 Aligned_cols=60 Identities=10% Similarity=0.001 Sum_probs=17.2
Q ss_pred cceeecccCceEEEEEEEcCCCcEEEE------EEeeccC--CcchhHHHHHHHHHHhhhhccceeeeeee
Q 002857 164 SENLIGAGNFASVYKGILFEGAPAVAI------KVFNFLH--HDASKSFTVECEVMRNIIHRKIIKVVTAC 226 (873)
Q Consensus 164 ~~~~LG~G~fG~VYkg~~~~~g~~VAV------K~l~~~~--~~~~~~f~~Ei~iL~~L~HpNIV~llg~c 226 (873)
+.+.|| ||.||+|.+......||| |..+... .+....|.+|..+++.++|+|+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 345666 999999999665567888 7665322 23335688899999999999999998874
No 439
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=75.59 E-value=2.5 Score=47.02 Aligned_cols=59 Identities=7% Similarity=0.118 Sum_probs=36.3
Q ss_pred cCCCCCCCCCeEeCCCCcCCCccc-ccccCCCCcceecccCCCccCCCCcccccccCccccccc
Q 002857 12 LSLSPLRGLKVLDLSQNNLSGEIP-EFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFG 74 (873)
Q Consensus 12 ~~l~~L~~L~~L~Ls~N~LsG~iP-~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~ 74 (873)
.+|.+ .+|+.|.|.+ +++ .|+ ..|.++++|+.|+|++|+++......+. ...+..+.+.
T Consensus 152 ~aF~~-~~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 152 MAFFN-STVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp TTTTT-CCCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred HhcCC-CCceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 34555 4688888874 666 444 5778888888888888888743333333 2344444443
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=73.14 E-value=0.83 Score=46.13 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=45.2
Q ss_pred CCCCCCCCCeEeCCCCcCCCc----ccccccCCCCcceecccCCCccCC----CCcccccccCccccccccc
Q 002857 13 SLSPLRGLKVLDLSQNNLSGE----IPEFLAGFKFLQNLNLSHNNFESM----IPTEGIFKNASATSVFGNN 76 (873)
Q Consensus 13 ~l~~L~~L~~L~Ls~N~LsG~----iP~~l~~L~~L~~L~LS~N~Lsg~----iP~~~~~~~~l~~~~l~nN 76 (873)
.+..=+.|+.|+|++|+|... |-..|..-+.|+.|+|++|+|+.. +-..+.....+..+.++||
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 345568999999999999732 445666789999999999999832 1122223345667777765
No 441
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=69.45 E-value=0.7 Score=45.85 Aligned_cols=47 Identities=9% Similarity=0.206 Sum_probs=35.9
Q ss_pred CcCcCCCCCCCCCeEeCCCCcCCCcccccccCCCCcceecccCCC-cc
Q 002857 9 PIGLSLSPLRGLKVLDLSQNNLSGEIPEFLAGFKFLQNLNLSHNN-FE 55 (873)
Q Consensus 9 ~iP~~l~~L~~L~~L~Ls~N~LsG~iP~~l~~L~~L~~L~LS~N~-Ls 55 (873)
.+|...-.--+|+.||||++.++..=-..+..+++|+.|+|+++. ++
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~It 99 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIE 99 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCC
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccC
Confidence 356654333579999999999875544567899999999999985 66
No 442
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=68.01 E-value=1.5 Score=45.05 Aligned_cols=48 Identities=29% Similarity=0.666 Sum_probs=37.3
Q ss_pred CccccccCCC-cccccceeeeecCcccCCchhh-----cccCCCCCcceecccC
Q 002857 720 GSCYRCLKGN-RFTKKEFCFVCGARYCSSCVLW-----AMDSMPEGRICVTCIG 767 (873)
Q Consensus 720 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 767 (873)
..|+.|.+.- .+.-||-|-.||.++|..|-.. .+|...+-|.|..|..
T Consensus 165 ~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~~~~p~~~~~~~~RVC~~C~~ 218 (226)
T 3zyq_A 165 EECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYE 218 (226)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEEEEEGGGTEEEEEEECHHHHH
T ss_pred CCCcCcCCCCCccccccccCCCcCEeChhhcCCcccCCCCCCCCCCEeCHHHHH
Confidence 4799998753 3345799999999999999764 3566677899999853
No 443
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=66.96 E-value=4.1 Score=45.33 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=18.7
Q ss_pred CCCCeEeCCCCcCCCccc-ccccCCCCcceecccCCCcc
Q 002857 18 RGLKVLDLSQNNLSGEIP-EFLAGFKFLQNLNLSHNNFE 55 (873)
Q Consensus 18 ~~L~~L~Ls~N~LsG~iP-~~l~~L~~L~~L~LS~N~Ls 55 (873)
.+|+.|.| .|+++ .|+ ..|.++++|+.|+|.+|.+.
T Consensus 248 ~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 248 SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCC
T ss_pred CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCcccc
Confidence 45555555 34444 332 45555555555555555543
No 444
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=65.80 E-value=1.8 Score=40.09 Aligned_cols=94 Identities=23% Similarity=0.447 Sum_probs=55.8
Q ss_pred CccccccCCC-cccccceeeeecCcccCCchhhcccCCCCCcceecccCcccchhhhccccccCCcccccCCHHHHHHHH
Q 002857 720 GSCYRCLKGN-RFTKKEFCFVCGARYCSSCVLWAMDSMPEGRICVTCIGFRLDASKRLSLWKCSGMPKGLLTETEVKQIM 798 (873)
Q Consensus 720 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (873)
..|+.|.+.- .+.-||.|-.||.++|+.|-..-+ +.-|.|..|.-..-..-.|..+ .-|....+++-+
T Consensus 20 ~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~---~~vRVC~~C~~~~~~~~~~~~l--------~~lkvkdL~~yL 88 (120)
T 1y02_A 20 PSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVG---NGPRLCLLCQRFRATAFQREEL--------MKMKVKDLRDYL 88 (120)
T ss_dssp CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC-------CCEEHHHHHHHHTTTCHHHH--------HTSCHHHHHHHH
T ss_pred CcccCcCCccccccccccCCCCCCeeCHHHhCCCC---CCceECHHHHHHHhccccHHHH--------hcccHHHHHHHH
Confidence 5799999862 344679999999999999977654 4699999995431111111111 112344455555
Q ss_pred hhhcccccCCCCCceeEEcCccCCHHHHHHHhcCCCCC
Q 002857 799 RSEISCKANQLPRDRVFVNGEPLSKRELVILLSCPNPP 836 (873)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
... .|+-+ | =..+|||..|+=+..+|
T Consensus 89 ~~~------~I~~~-----~-c~EKedLv~lvl~~~~~ 114 (120)
T 1y02_A 89 SLH------DISTE-----M-CREKEELVLLVLGQQPV 114 (120)
T ss_dssp HHT------TCCCT-----T-CCSHHHHHHHHHHTCCC
T ss_pred HhC------CCCcc-----c-ceeHHHHHHHHHhcCCC
Confidence 431 22221 1 24688898888777755
No 445
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=65.40 E-value=3.4 Score=40.82 Aligned_cols=43 Identities=12% Similarity=0.176 Sum_probs=26.3
Q ss_pred CCCCCCCCCeEeCCCCc-CCCcccccccCC----CCcceecccCCC-cc
Q 002857 13 SLSPLRGLKVLDLSQNN-LSGEIPEFLAGF----KFLQNLNLSHNN-FE 55 (873)
Q Consensus 13 ~l~~L~~L~~L~Ls~N~-LsG~iP~~l~~L----~~L~~L~LS~N~-Ls 55 (873)
.+..+++|+.|+|+++. ++..==..|+.+ ++|+.|+||++. +|
T Consensus 80 ~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 80 HMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp GGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred HhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 35677777777777764 553322345554 357777777764 55
No 446
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=64.60 E-value=5.9 Score=39.51 Aligned_cols=48 Identities=23% Similarity=0.438 Sum_probs=39.9
Q ss_pred CccccccCCCcccccceeeeecCcccCCchhhcccCCCCCc-ceecccCccc
Q 002857 720 GSCYRCLKGNRFTKKEFCFVCGARYCSSCVLWAMDSMPEGR-ICVTCIGFRL 770 (873)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 770 (873)
..|..|.++.. --.|-.|.+.|-..|+.-++.++|+|. .|..|...+-
T Consensus 3 ~~C~~C~~~g~---ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 3 TICRVCQKPGD---LVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 51 (189)
T ss_dssp CCBTTTCCCSS---CCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSCC
T ss_pred CcCccCCCCCc---eeECCCCCchhccccCCCCcccCCCCCCCCcCccCCCC
Confidence 35999998854 345999999999999988888998876 8999987754
No 447
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=62.71 E-value=1.3 Score=37.31 Aligned_cols=48 Identities=23% Similarity=0.582 Sum_probs=36.3
Q ss_pred CccccccCCC-cccccceeeeecCcccCCchhh-----cccCCCCCcceecccC
Q 002857 720 GSCYRCLKGN-RFTKKEFCFVCGARYCSSCVLW-----AMDSMPEGRICVTCIG 767 (873)
Q Consensus 720 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 767 (873)
..|..|.+.- .+.-||-|-.||.++|+.|-.. .+|...+-|.|..|..
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~ 65 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFE 65 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEEEEGGGTEEEEEEECHHHHH
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccccCCeEEcccCCCCCCCEECHHHHH
Confidence 3799999863 2345799999999999999753 3555567789988853
No 448
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=61.87 E-value=3 Score=35.79 Aligned_cols=48 Identities=25% Similarity=0.600 Sum_probs=36.7
Q ss_pred CccccccCCCc-ccccceeeeecCcccCCchhhcc---cCCCCCcceecccC
Q 002857 720 GSCYRCLKGNR-FTKKEFCFVCGARYCSSCVLWAM---DSMPEGRICVTCIG 767 (873)
Q Consensus 720 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 767 (873)
..|+.|.+.-. +.-||-|-.||.++|..|-..-+ +...+-|.|..|..
T Consensus 20 ~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~ 71 (82)
T 2yw8_A 20 THCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHT 71 (82)
T ss_dssp CBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEEECCTTCSSCEEECHHHHH
T ss_pred CcccCcCCcccCccccccCCCCCCEEChHHhCCeeecCCCCCcCEECHHHHH
Confidence 57999998633 34579999999999999976543 34567789988854
No 449
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=60.07 E-value=1.6 Score=44.57 Aligned_cols=46 Identities=28% Similarity=0.632 Sum_probs=36.2
Q ss_pred ccccccCCC-cccccceeeeecCcccCCchhh-----cccCCCCCcceeccc
Q 002857 721 SCYRCLKGN-RFTKKEFCFVCGARYCSSCVLW-----AMDSMPEGRICVTCI 766 (873)
Q Consensus 721 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 766 (873)
.|+.|.+.- .+.-||-|-.||.++|+.|-.. .+|...+-|.|..|.
T Consensus 163 ~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~~~~~~~~~~~~~RvC~~C~ 214 (220)
T 1dvp_A 163 VCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPKYGIEKEVRVCDGCF 214 (220)
T ss_dssp BCTTTCCBCCSSSCCEECTTTCCEECSTTSCEEEEEGGGTEEEEEEECHHHH
T ss_pred ccCCCCCccCCcccccccCCcCCEEChHHhCCeeecCcCCCCCCCEeCHHHH
Confidence 699998763 3345799999999999999654 356667789999885
No 450
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=59.87 E-value=1.1 Score=39.41 Aligned_cols=61 Identities=21% Similarity=0.470 Sum_probs=38.6
Q ss_pred CccccccCCC-cccccceeeeecCcccCCchhhcc--cC-CCCCcceecccCcccchhhhccccc
Q 002857 720 GSCYRCLKGN-RFTKKEFCFVCGARYCSSCVLWAM--DS-MPEGRICVTCIGFRLDASKRLSLWK 780 (873)
Q Consensus 720 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (873)
..|..|.+.- .+.-||.|-.||.++|..|...-+ .. -.+-|.|..|...--...++.+++.
T Consensus 21 ~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l~~~~~~~~~~s 85 (90)
T 3t7l_A 21 PNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYLEKEARVCVVCYETISKAQAFERMMS 85 (90)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEETTTTEEEEECHHHHHHHHHHC-------
T ss_pred CcCcCCCCcccchhhCccccCCCCEECCcccCCeeecCCCCCCCeECHHHHHHHHHHhhhccccC
Confidence 5799998753 344589999999999999987643 11 1467999999754333334444443
No 451
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=59.26 E-value=1.6 Score=37.74 Aligned_cols=48 Identities=21% Similarity=0.464 Sum_probs=37.0
Q ss_pred CccccccCCC-cccccceeeeecCcccCCchhhc-----ccCCCCCcceecccC
Q 002857 720 GSCYRCLKGN-RFTKKEFCFVCGARYCSSCVLWA-----MDSMPEGRICVTCIG 767 (873)
Q Consensus 720 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 767 (873)
..|+.|.+.- .+.-||-|-.||.++|+.|...- .|...+-|.|..|..
T Consensus 22 ~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~ 75 (84)
T 1z2q_A 22 PACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYL 75 (84)
T ss_dssp CBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHH
T ss_pred CCCcCcCCccccchhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHH
Confidence 6899999863 33457999999999999996543 454567789988863
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=57.35 E-value=11 Score=38.45 Aligned_cols=82 Identities=17% Similarity=0.212 Sum_probs=60.1
Q ss_pred CCchhhhHHHHHHHHHHHH-HHhhCCCCCeeeccCCCCCeeeCCCCCeEEeccccccccccccccccccccccccccCCC
Q 002857 268 NLNSLERLNIAIDVASALE-YLHLGCKPPIAHCDIKPSNILLNDEMTACVADFGIARFLEATNEQTSSIGVKGTTGYIAP 346 (873)
Q Consensus 268 ~Ls~~~~l~Ia~qIa~gL~-yLH~~~s~gIvHrDLKpsNILLd~~~~vKLsDFGla~~~~~~~~~~~~~~~~Gt~~Y~AP 346 (873)
.++...+++++.+|+.... +++ .-+|--|.|+||++|.++.++|.-.|+-..+ +|
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~~~p~i~hRGi~~~l-------------------pP 136 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRALEPFFLHVGVKESL-------------------PP 136 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTTCCEEESCCEETTTB-------------------SS
T ss_pred hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCCCcEEEEEcCCcccC-------------------CC
Confidence 3677789999999888766 555 5678889999999999999999988875432 22
Q ss_pred cccCCCCCCcchh-hHhHHHHHHHHHhCCCCCCc
Q 002857 347 EYGMGHETSSYGD-VYSFGILLLEMFTGLRPSDD 379 (873)
Q Consensus 347 E~l~~~~~s~ksD-VwSfGvvL~ELlTGk~Pf~~ 379 (873)
.- .+ ..| .-.+=+++..++.++..|+.
T Consensus 137 ~e-----~~-ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 137 DE-----WD-DERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp CS-----CC-HHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred CC-----CC-HHHHHHHHHHHHHHHHcCCCCHHH
Confidence 21 11 123 33577888889999888765
No 453
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=57.31 E-value=2.9 Score=38.93 Aligned_cols=47 Identities=28% Similarity=0.689 Sum_probs=35.9
Q ss_pred CccccccCCC-cccccceeeeecCcccCCchhhcc---cCCCCCcceeccc
Q 002857 720 GSCYRCLKGN-RFTKKEFCFVCGARYCSSCVLWAM---DSMPEGRICVTCI 766 (873)
Q Consensus 720 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 766 (873)
..|+.|.+.- .+.-||-|-.||.++|+.|...-+ +...+-|.|..|.
T Consensus 70 ~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~~~~p~~~~p~RVC~~C~ 120 (125)
T 1joc_A 70 QNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDACF 120 (125)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEECCTTCSSCEEECHHHH
T ss_pred CCCcCcCCccccccccccCCCCCeEEChHHhCCccccCCCCCCCEeCHHHH
Confidence 5799999863 334579999999999999976542 2346778888885
No 454
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=50.16 E-value=9.4 Score=33.34 Aligned_cols=49 Identities=22% Similarity=0.454 Sum_probs=40.7
Q ss_pred CCccccccCCCcccccceeeeecCcccCCchhhcccCCCCCc-ceecccCccc
Q 002857 719 KGSCYRCLKGNRFTKKEFCFVCGARYCSSCVLWAMDSMPEGR-ICVTCIGFRL 770 (873)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 770 (873)
-..|..|.++..+ -.|-.|.+.|=-.|+.-++.++|+|. .|..|...+-
T Consensus 25 ~~~C~vC~~~g~L---L~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~~ 74 (88)
T 1fp0_A 25 ATICRVCQKPGDL---VMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 74 (88)
T ss_dssp SSCCSSSCSSSCC---EECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred CCcCcCcCCCCCE---EECCCCCCceecccCCCCCCCCcCCCcCCccccCCCc
Confidence 3689999998543 46999999999999998999999876 7999987653
No 455
>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}
Probab=49.03 E-value=5.2 Score=31.17 Aligned_cols=32 Identities=13% Similarity=0.298 Sum_probs=25.8
Q ss_pred CCCcccccccc------ccccCCceeeeecCCcccchh
Q 002857 538 KKSSCCQCLQE------NRSSEMDVCIFCDAMYCCNCV 569 (873)
Q Consensus 538 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 569 (873)
++...|+|+.+ ..+..+|+|++...+.|++|-
T Consensus 2 p~k~~CrCG~~~~~~~~~TC~~~RCpCY~~~~sC~~C~ 39 (52)
T 2lua_A 2 PPKPKCRCGISGSSNTLTTCRNSRCPCYKSYNSCAGCH 39 (52)
T ss_dssp CCCCCCCBTTBSCCCSSSTTTSTTCHHHHTTCCCSSCC
T ss_pred CCCcccccCcccCCCCceeEcCCccceecCCCccCCCE
Confidence 44567999554 467888999999999999984
No 456
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.22 E-value=7.7 Score=33.35 Aligned_cols=48 Identities=27% Similarity=0.705 Sum_probs=35.5
Q ss_pred CccccccCCC-cccccceeeeecCcccCCchhhc-----ccCC------CCCcceecccC
Q 002857 720 GSCYRCLKGN-RFTKKEFCFVCGARYCSSCVLWA-----MDSM------PEGRICVTCIG 767 (873)
Q Consensus 720 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~------~~~~~~~~~~~ 767 (873)
..|+.|.+.- .+.-||-|-.||.++|..|-..- +|.. .+-|.|..|..
T Consensus 15 ~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~l~~~g~~~p~~~~~~~RVC~~C~~ 74 (84)
T 1x4u_A 15 GNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQ 74 (84)
T ss_dssp SSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEEECSTTTSCCCSSCSSCCEEECHHHHH
T ss_pred CcCcCcCCccccchhhhhhcCCCcEEChhhcCCceecccccccCccccCCccEECHHHHH
Confidence 5799999863 34457999999999999996532 4432 35788988853
No 457
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=42.68 E-value=18 Score=36.34 Aligned_cols=72 Identities=19% Similarity=0.318 Sum_probs=46.4
Q ss_pred CccccccCCCcccccceeeeecCcccCCchhhcccCCCCC-cceecccCcccchhhh---ccccccCCcccccCCHHHH
Q 002857 720 GSCYRCLKGNRFTKKEFCFVCGARYCSSCVLWAMDSMPEG-RICVTCIGFRLDASKR---LSLWKCSGMPKGLLTETEV 794 (873)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 794 (873)
..|..|.++.. --.|-.|.+.|--.|+.-++.+.|+| -.|..|....-.+..- ...+..++...+-|++.+.
T Consensus 8 ~~C~~C~~~g~---ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~~~~~~~c~~~~~s~k~~~~~~ls~~~~ 83 (207)
T 3u5n_A 8 DWCAVCQNGGD---LLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDNLQHSKKGKTAQGLSPVDQ 83 (207)
T ss_dssp SSBTTTCCCEE---EEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSSCSSCCSCC----------CCSSCHHHH
T ss_pred CCCCCCCCCCc---eEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccccccccccccccchhhhhhhhcccHHHH
Confidence 56999998843 34688999999999999888899987 5899998765433110 0112223445566776654
No 458
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=40.81 E-value=5.8 Score=44.34 Aligned_cols=48 Identities=21% Similarity=0.522 Sum_probs=0.0
Q ss_pred CccccccCCCc-ccccceeeeecCcccCCchhhcc----cCCCCCcceecccC
Q 002857 720 GSCYRCLKGNR-FTKKEFCFVCGARYCSSCVLWAM----DSMPEGRICVTCIG 767 (873)
Q Consensus 720 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 767 (873)
..|..|.+.-. +.-||.|-.||++.|..|-..-+ +.-.+-|.|..|-.
T Consensus 376 ~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~ 428 (434)
T 3mpx_A 376 MMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFG 428 (434)
T ss_dssp -----------------------------------------------------
T ss_pred CcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHH
Confidence 57999987533 33579999999999999975432 22345799999964
No 459
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=40.74 E-value=6.2 Score=34.39 Aligned_cols=47 Identities=26% Similarity=0.729 Sum_probs=35.7
Q ss_pred CccccccCCC-cccccceeeeecCcccCCchhhc-----ccCCCCCcceecccC
Q 002857 720 GSCYRCLKGN-RFTKKEFCFVCGARYCSSCVLWA-----MDSMPEGRICVTCIG 767 (873)
Q Consensus 720 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 767 (873)
..|+.|.+.- .+.-||-|-.||.++|..|-..- +| ..+-|.|..|..
T Consensus 10 ~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g-~~~~RVC~~C~~ 62 (88)
T 1wfk_A 10 SRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAG-NTQQKVCKQCHT 62 (88)
T ss_dssp SBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTT-SEEEEECHHHHH
T ss_pred CCCcCcCCcccCccccccCCCCCCEEChhHcCCceeccccC-CCcCEECHHHHH
Confidence 4799999863 34457999999999999997643 33 356799999964
No 460
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=38.93 E-value=12 Score=29.34 Aligned_cols=35 Identities=23% Similarity=0.449 Sum_probs=29.1
Q ss_pred cceeeeecCcccC--------CchhhcccCCCCCcceecccCc
Q 002857 734 KEFCFVCGARYCS--------SCVLWAMDSMPEGRICVTCIGF 768 (873)
Q Consensus 734 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 768 (873)
+.+|.+||-+|=. -++++...++|+.-+|..|--.
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~ 44 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAP 44 (52)
T ss_dssp EEEESSSSCEEETTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCCHhHCCCCCcCCCCCCC
Confidence 5689999999964 3678888999999999999654
No 461
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=37.41 E-value=23 Score=28.44 Aligned_cols=48 Identities=25% Similarity=0.589 Sum_probs=39.1
Q ss_pred CccccccCCCcccccceeeeecCcccCCchhhcccCCCCCc-ceecccCccc
Q 002857 720 GSCYRCLKGNRFTKKEFCFVCGARYCSSCVLWAMDSMPEGR-ICVTCIGFRL 770 (873)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 770 (873)
..|..|.++.. --.|-.|.+.|=..|+...+-++|+|. .|..|..++.
T Consensus 10 ~~C~vC~~~g~---ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~ 58 (61)
T 1mm2_A 10 EFCRVCKDGGE---LLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPAL 58 (61)
T ss_dssp SSCTTTCCCSS---CBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCC
T ss_pred CcCCCCCCCCC---EEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCchh
Confidence 56999998743 456889999999999998888899875 6999976654
No 462
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.24 E-value=17 Score=28.57 Aligned_cols=47 Identities=26% Similarity=0.603 Sum_probs=37.0
Q ss_pred CCccccccCCCcccccceeeeecCcccCCchhhcccCCCCCc-ceecccCc
Q 002857 719 KGSCYRCLKGNRFTKKEFCFVCGARYCSSCVLWAMDSMPEGR-ICVTCIGF 768 (873)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 768 (873)
-..|..|.++. .--.|-.|.+.|=..|+.-.+-.+|+|. .|..|..|
T Consensus 9 ~~~C~vC~~~g---~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~q 56 (56)
T 2yql_A 9 EDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 56 (56)
T ss_dssp CCSCSSSCCSS---CCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHCC
T ss_pred CCCCccCCCCC---eEEEcCCCCcceECccCCCCcCCCCCCceEChhhhCc
Confidence 36799999884 3456889999999999998888888765 68877653
No 463
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=35.19 E-value=16 Score=28.62 Aligned_cols=35 Identities=23% Similarity=0.426 Sum_probs=28.6
Q ss_pred cceeeeecCcccC--------CchhhcccCCCCCcceecccCc
Q 002857 734 KEFCFVCGARYCS--------SCVLWAMDSMPEGRICVTCIGF 768 (873)
Q Consensus 734 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 768 (873)
+.+|.+||-+|=. -++++...++|+.-+|..|--.
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~ 45 (52)
T 1e8j_A 3 IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGAS 45 (52)
T ss_dssp CEECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTTCCCSSSCCC
T ss_pred cEEeCCCCeEEcCCcCCcccCcCCCCchHHCCCCCcCCCCCCc
Confidence 5689999999962 3577888999999999999653
No 464
>2k0a_A PRE-mRNA-splicing factor RDS3; zinc finger, topological knot, mRNA processing, nucleus, spliceosome, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=34.75 E-value=3.8 Score=36.52 Aligned_cols=29 Identities=31% Similarity=0.811 Sum_probs=23.0
Q ss_pred CccccccCCCcccccceeeeec-------CcccCCchhh
Q 002857 720 GSCYRCLKGNRFTKKEFCFVCG-------ARYCSSCVLW 751 (873)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 751 (873)
++|--|.-| .+..+|++|| |-||..|+..
T Consensus 46 rICdeCs~G---~~~~rCIiCg~~~g~~dAYYC~eC~~l 81 (109)
T 2k0a_A 46 RVCENCSFG---KQAKNCIICNLNVGVNDAFYCWECCRL 81 (109)
T ss_dssp EEEHHHHTS---STTSBCTTTSSSBCCEECEECHHHHHH
T ss_pred EECCcCCCC---CcCCceEEcCCCCCcccceehHhhhhh
Confidence 688888876 3478899999 7799999854
No 465
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=34.23 E-value=35 Score=36.61 Aligned_cols=59 Identities=15% Similarity=0.218 Sum_probs=32.8
Q ss_pred CCCCCCCCCeEeCCCCcCCCccc-ccccCCCCcceecccCCCccCCCCcccccccCcccccc
Q 002857 13 SLSPLRGLKVLDLSQNNLSGEIP-EFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVF 73 (873)
Q Consensus 13 ~l~~L~~L~~L~Ls~N~LsG~iP-~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l 73 (873)
+|.++.+|+.+.|..+ ++ .|+ ..|.++++|+.++|.+|.++..-..++.....+..+.+
T Consensus 258 aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp TTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 3455677777777543 55 444 35667777777777777666332333333334444444
No 466
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=33.92 E-value=32 Score=37.36 Aligned_cols=59 Identities=14% Similarity=0.021 Sum_probs=32.5
Q ss_pred CCCCCCCCCeEeCCCCcCCCccc-ccccCCCCcceecccCCCccCCCCcccccccCccccccc
Q 002857 13 SLSPLRGLKVLDLSQNNLSGEIP-EFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFG 74 (873)
Q Consensus 13 ~l~~L~~L~~L~Ls~N~LsG~iP-~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~ 74 (873)
.|..+.+|+.+.|.+| ++ .|+ ..|.++++|+.++|.++ ++..-..++.....+..+.+.
T Consensus 292 ~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp 351 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFP 351 (394)
T ss_dssp TTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEEC
Confidence 3566777777777644 55 454 45777777777777643 442222233333344444443
No 467
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=33.39 E-value=21 Score=30.10 Aligned_cols=39 Identities=28% Similarity=0.633 Sum_probs=28.0
Q ss_pred cCCCCccccccCCCcccccceeeeecCcccCCchhhcccCCCCCcce
Q 002857 716 KGKKGSCYRCLKGNRFTKKEFCFVCGARYCSSCVLWAMDSMPEGRIC 762 (873)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (873)
+.+++-|..|.|.-.+ ..-.|- ||..+|+. =-++|--.|
T Consensus 22 k~~~nRC~~CrKkvgL-~gf~Cr-Cg~~FCs~------HRy~e~H~C 60 (74)
T 1wfl_A 22 KPKKNRCFMCRKKVGL-TGFDCR-CGNLFCGL------HRYSDKHNC 60 (74)
T ss_dssp CSCTTBCSSSCCBCGG-GCEECT-TSCEECSS------SCSTTTTTC
T ss_pred CCcCCcChhhCCcccc-cCeecC-CCCEechh------cCCCccCCC
Confidence 3466899999998444 457788 99999964 345565555
No 468
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=32.20 E-value=21 Score=27.10 Aligned_cols=13 Identities=23% Similarity=0.345 Sum_probs=5.1
Q ss_pred eeehhhcchhhhh
Q 002857 106 LVIAIDCGLLVLT 118 (873)
Q Consensus 106 ivIai~~g~vv~~ 118 (873)
++.+++.|+++++
T Consensus 13 IA~gVVgGv~~~~ 25 (44)
T 2ks1_B 13 IATGMVGALLLLL 25 (44)
T ss_dssp STHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 3334443343333
No 469
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=31.33 E-value=52 Score=32.19 Aligned_cols=49 Identities=24% Similarity=0.575 Sum_probs=40.0
Q ss_pred CccccccCCCcccccceeeeecCcccCCchhhcccCCCCC-cceecccCcccc
Q 002857 720 GSCYRCLKGNRFTKKEFCFVCGARYCSSCVLWAMDSMPEG-RICVTCIGFRLD 771 (873)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 771 (873)
..|..|.++..+ -.|-.|.+.|--.|+.-++.++|+| -.|..|......
T Consensus 5 ~~C~~C~~~g~l---l~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~~ 54 (184)
T 3o36_A 5 DWCAVCQNGGEL---LCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSKP 54 (184)
T ss_dssp SSCTTTCCCSSC---EECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSSC
T ss_pred CccccCCCCCee---eecCCCCcccCccccCCCCCCCCCCCEECccccCcccc
Confidence 469999988543 4688899999999998888888887 589999887653
No 470
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=30.92 E-value=17 Score=30.26 Aligned_cols=38 Identities=18% Similarity=0.248 Sum_probs=31.3
Q ss_pred ccceeeeecCcccC--------CchhhcccCCCCCcceecccCccc
Q 002857 733 KKEFCFVCGARYCS--------SCVLWAMDSMPEGRICVTCIGFRL 770 (873)
Q Consensus 733 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 770 (873)
.+.+|.+||-+|=. -++++...++|+.-+|..|--.+-
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~K~ 51 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSPKN 51 (70)
T ss_dssp SCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCBGG
T ss_pred ceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCCHH
Confidence 46799999999963 467888999999999999976543
No 471
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=30.34 E-value=14 Score=32.09 Aligned_cols=37 Identities=22% Similarity=0.402 Sum_probs=30.4
Q ss_pred cccceeeeecCcccC--------CchhhcccCCCCCcceecccCc
Q 002857 732 TKKEFCFVCGARYCS--------SCVLWAMDSMPEGRICVTCIGF 768 (873)
Q Consensus 732 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 768 (873)
..+.+|.+||-+|=. -++++...++|+.-.|..|--.
T Consensus 33 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 77 (87)
T 1s24_A 33 YLKWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGAT 77 (87)
T ss_dssp CCEEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCCC
T ss_pred CceEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCCC
Confidence 346899999999864 4677889999999999999754
No 472
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=29.91 E-value=18 Score=31.10 Aligned_cols=37 Identities=24% Similarity=0.430 Sum_probs=30.6
Q ss_pred ccceeeeecCcccC--------CchhhcccCCCCCcceecccCcc
Q 002857 733 KKEFCFVCGARYCS--------SCVLWAMDSMPEGRICVTCIGFR 769 (873)
Q Consensus 733 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 769 (873)
.+-+|.+||-+|=. -++++...++|+.-+|..|--.+
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~K 70 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAK 70 (81)
T ss_dssp CEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCCG
T ss_pred ceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCCH
Confidence 46799999999964 46788899999999999997643
No 473
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=27.67 E-value=19 Score=29.14 Aligned_cols=25 Identities=32% Similarity=0.691 Sum_probs=19.3
Q ss_pred CccccccCCCcccccceeeeecCcccCC
Q 002857 720 GSCYRCLKGNRFTKKEFCFVCGARYCSS 747 (873)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (873)
+.|-.|+ .||++++|.+||...-+.
T Consensus 7 r~C~~Cg---vYTLk~~CP~CG~~T~~~ 31 (60)
T 2apo_B 7 KKCPKCG---LYTLKEICPKCGEKTVIP 31 (60)
T ss_dssp EECTTTC---CEESSSBCSSSCSBCBCC
T ss_pred eeCCCCC---CEeccccCcCCCCcCCCC
Confidence 5688884 568899999999875443
No 474
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=27.54 E-value=64 Score=34.95 Aligned_cols=60 Identities=12% Similarity=0.197 Sum_probs=35.3
Q ss_pred cCCCCCCCCCeEeCCCCcCCCccc-ccccCCCCcceecccCCCccCCCCcccccccCccccccc
Q 002857 12 LSLSPLRGLKVLDLSQNNLSGEIP-EFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFG 74 (873)
Q Consensus 12 ~~l~~L~~L~~L~Ls~N~LsG~iP-~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~ 74 (873)
.+|.++++|+.+.|. +.++ .|+ ..|.++.+|+.++|..| ++..-..++.....|..+.+.
T Consensus 282 ~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 282 GAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp TTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 346677888888885 5566 565 46777888888888654 442222233333344444443
No 475
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=26.21 E-value=26 Score=27.75 Aligned_cols=36 Identities=25% Similarity=0.413 Sum_probs=29.0
Q ss_pred cceeeeecCcccCC--------chhhcccCCCCCcceecccCcc
Q 002857 734 KEFCFVCGARYCSS--------CVLWAMDSMPEGRICVTCIGFR 769 (873)
Q Consensus 734 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 769 (873)
+.+|.+||-+|=.. .+++...++|+.-.|..|-..+
T Consensus 3 ~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~~K 46 (54)
T 4rxn_A 3 KYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVGK 46 (54)
T ss_dssp CEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCBG
T ss_pred ceECCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCcCCCCcH
Confidence 56899999999642 5677788999999999996543
No 476
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=26.15 E-value=15 Score=29.69 Aligned_cols=25 Identities=40% Similarity=0.792 Sum_probs=19.6
Q ss_pred CccccccCCCcccccceeeeecCcccCC
Q 002857 720 GSCYRCLKGNRFTKKEFCFVCGARYCSS 747 (873)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (873)
+.|-.|+ .||++++|.+||....+.
T Consensus 6 r~C~~Cg---~YTLk~~CP~CG~~t~~a 30 (60)
T 2aus_D 6 RKCPKCG---RYTLKETCPVCGEKTKVA 30 (60)
T ss_dssp EECTTTC---CEESSSBCTTTCSBCEES
T ss_pred eECCCCC---CEEccccCcCCCCccCCC
Confidence 5688885 568899999999876554
No 477
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=25.71 E-value=23 Score=28.04 Aligned_cols=36 Identities=25% Similarity=0.381 Sum_probs=29.6
Q ss_pred cceeeeecCcccC--------CchhhcccCCCCCcceecccCcc
Q 002857 734 KEFCFVCGARYCS--------SCVLWAMDSMPEGRICVTCIGFR 769 (873)
Q Consensus 734 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 769 (873)
+.+|.+||-+|=. -++++...++|+.-+|..|--.+
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cga~K 46 (55)
T 2v3b_B 3 KWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVGK 46 (55)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTCCCTTTCCCG
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCCCCCCCH
Confidence 5789999999964 36778889999999999996543
No 478
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=24.68 E-value=21 Score=27.01 Aligned_cols=8 Identities=25% Similarity=0.563 Sum_probs=2.9
Q ss_pred hhhcchhh
Q 002857 109 AIDCGLLV 116 (873)
Q Consensus 109 ai~~g~vv 116 (873)
+++.|+++
T Consensus 15 gVVgGv~~ 22 (44)
T 2l2t_A 15 GVIGGLFI 22 (44)
T ss_dssp HHHHHHHH
T ss_pred eehHHHHH
Confidence 33333333
No 479
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=24.22 E-value=37 Score=28.58 Aligned_cols=30 Identities=30% Similarity=0.689 Sum_probs=24.1
Q ss_pred cCCCCccccccCCCcccccceeeeecCcccCC
Q 002857 716 KGKKGSCYRCLKGNRFTKKEFCFVCGARYCSS 747 (873)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (873)
+.+++-|..|.|.-.++ .-.| -|+..+|+.
T Consensus 22 k~~~~RC~~C~kkvgL~-~f~C-rCg~~FCs~ 51 (74)
T 1wfp_A 22 KSTATRCLSCNKKVGVT-GFKC-RCGSTFCGT 51 (74)
T ss_dssp TCCCCBCSSSCCBCTTT-CEEC-TTSCEECTT
T ss_pred cccCccchhhcCccccc-ceEe-ccCCEeccc
Confidence 45678999999985554 7789 799999975
No 480
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=23.91 E-value=28 Score=26.63 Aligned_cols=47 Identities=26% Similarity=0.527 Sum_probs=36.7
Q ss_pred ccccccCCCcccccceeeeecCcccCCchhhcccCCCCCc-ceecccC
Q 002857 721 SCYRCLKGNRFTKKEFCFVCGARYCSSCVLWAMDSMPEGR-ICVTCIG 767 (873)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 767 (873)
.|..|.++.....--.|-.|.+.|=-.|+.-++-++|+|. .|..|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 4788887755556677899999998899988888898864 6877753
No 481
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=23.58 E-value=27 Score=26.63 Aligned_cols=33 Identities=30% Similarity=0.583 Sum_probs=25.3
Q ss_pred cceeeeecCcccC---CchhhcccCCCCCcceecccCc
Q 002857 734 KEFCFVCGARYCS---SCVLWAMDSMPEGRICVTCIGF 768 (873)
Q Consensus 734 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 768 (873)
+.+|.+||-+|=. .. +...++|+.-+|..|-..
T Consensus 4 ~y~C~vCGyvyd~~~Gd~--t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDN--VPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CEEETTTCCEECGGGGTT--CCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCCeEEeCCcCCC--cchhhCCCCCcCcCCCCc
Confidence 5689999998852 11 667789999999999643
No 482
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=23.37 E-value=31 Score=28.07 Aligned_cols=49 Identities=20% Similarity=0.570 Sum_probs=38.7
Q ss_pred CCccccccCCCcccccceeeeecCcccCCchhhcccCCCCCc-ceecccCccc
Q 002857 719 KGSCYRCLKGNRFTKKEFCFVCGARYCSSCVLWAMDSMPEGR-ICVTCIGFRL 770 (873)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 770 (873)
-..|..|.++.. --.|-.|.+.|=..|+.-.+.++|+|. .|..|...+.
T Consensus 8 ~~~C~vC~~~g~---ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 8 EDECAVCRDGGE---LICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp CCSBSSSSCCSS---CEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCccCCCCCC---EEEcCCCChhhcccccCCCcCcCCCCCeECccccCccc
Confidence 367999998843 456889999999999988888888875 7999975544
No 483
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=23.07 E-value=47 Score=36.04 Aligned_cols=62 Identities=13% Similarity=0.192 Sum_probs=43.1
Q ss_pred cCCCCCCCCCeEeCCCCcCCCccc-ccccCCCCcceecccCCCccCCCCcccccccCccccccccc
Q 002857 12 LSLSPLRGLKVLDLSQNNLSGEIP-EFLAGFKFLQNLNLSHNNFESMIPTEGIFKNASATSVFGNN 76 (873)
Q Consensus 12 ~~l~~L~~L~~L~Ls~N~LsG~iP-~~l~~L~~L~~L~LS~N~Lsg~iP~~~~~~~~l~~~~l~nN 76 (873)
.+|.++++|+.++|..| ++ .|. ..|.++.+|+.+.|..| ++..-..++..-..|..+.+.++
T Consensus 305 ~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 305 SVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred eeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 45778999999999754 77 565 57899999999999755 66332334444455666666554
No 484
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=21.83 E-value=31 Score=27.60 Aligned_cols=50 Identities=26% Similarity=0.586 Sum_probs=39.1
Q ss_pred CCCccccccCCCcccccceeeeecCcccCCchhhcccCCCCCc-ceecccCccc
Q 002857 718 KKGSCYRCLKGNRFTKKEFCFVCGARYCSSCVLWAMDSMPEGR-ICVTCIGFRL 770 (873)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 770 (873)
....|..|.++. .--.|-.|.+.|=-.|+...+-++|+|. .|..|..+.|
T Consensus 10 ~~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~g~ 60 (61)
T 2l5u_A 10 HQDYCEVCQQGG---EIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGI 60 (61)
T ss_dssp CCSSCTTTSCCS---SEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGGSC
T ss_pred CCCCCccCCCCC---cEEECCCCChhhhhhccCCCCCCCCCCceECcccccccc
Confidence 346799999874 3456889999999999998888888775 7888876543
No 485
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=20.91 E-value=29 Score=27.96 Aligned_cols=31 Identities=35% Similarity=0.743 Sum_probs=24.8
Q ss_pred CccccccCCCcccccceeeeecCcccC-Cchh
Q 002857 720 GSCYRCLKGNRFTKKEFCFVCGARYCS-SCVL 750 (873)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 750 (873)
..|--|........|-.|..|+..||+ .|.-
T Consensus 12 ~~C~vC~~~~~~~akY~CPrC~~rYCSl~C~k 43 (59)
T 1x4s_A 12 GPCGFCPAGEVQPARYTCPRCNAPYCSLRCYR 43 (59)
T ss_dssp EEECSSCTTCCEEECEECTTTCCEESSHHHHH
T ss_pred CcCcCCCCCcCCCccccCcCCCCCccChHHHH
Confidence 579999875446778899999999998 5554
No 486
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=20.71 E-value=3e+02 Score=29.75 Aligned_cols=77 Identities=17% Similarity=0.163 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCChhhhcccccccccccCCCCCCchhhhHHHHHHHH--HHHHHHh-hCCCCCeee-ccCCCCCeeeCCC
Q 002857 236 FKALVYEFMPNGSLEEWIHPITEEDKRHKAPGNLNSLERLNIAIDVA--SALEYLH-LGCKPPIAH-CDIKPSNILLNDE 311 (873)
Q Consensus 236 ~~~LV~Ey~~~GSL~~~L~~~~~~~~~~~~~~~Ls~~~~l~Ia~qIa--~gL~yLH-~~~s~gIvH-rDLKpsNILLd~~ 311 (873)
..+++|+|.+|..|.+.-+. ......-.+.+.++. -++.++. .....+.+. .--.+.|||++.+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~------------~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTT------------SAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp SEEEEEECCCEEESTTCCSS------------SHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred cceehhhhcCCCccccchhh------------hhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 46799999987666543211 000000123334432 3444444 333333332 2357899999865
Q ss_pred CC-eEEeccccccc
Q 002857 312 MT-ACVADFGIARF 324 (873)
Q Consensus 312 ~~-vKLsDFGla~~ 324 (873)
.. +.++|-+++..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 54 88899888864
No 487
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.37 E-value=41 Score=29.36 Aligned_cols=49 Identities=31% Similarity=0.593 Sum_probs=40.2
Q ss_pred CccccccCCCcccccceeeeecCcccCCchhhcccCCCCCc-ceecccCc
Q 002857 720 GSCYRCLKGNRFTKKEFCFVCGARYCSSCVLWAMDSMPEGR-ICVTCIGF 768 (873)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 768 (873)
..|..|.++.....--.|-.|.+.|=..|+.-.+-.+|+|. .|..|...
T Consensus 17 ~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 17 YICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred CCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 57999999865666778999999998999987788888864 69999654
No 488
>2ec7_A GAG polyprotein (PR55GAG); nucleocapsid protein, HIV-2, RNA recognition, zinc finger, viral protein; NMR {Human immunodeficiency virus type 2} SCOP: g.40.1.1
Probab=20.22 E-value=45 Score=25.41 Aligned_cols=16 Identities=25% Similarity=0.436 Sum_probs=12.0
Q ss_pred cCCCCccccccCCCcc
Q 002857 716 KGKKGSCYRCLKGNRF 731 (873)
Q Consensus 716 ~~~~~~~~~~~~~~~~ 731 (873)
++++..||+|++..++
T Consensus 3 ~~r~~~C~~Cg~~GH~ 18 (49)
T 2ec7_A 3 QRKVIRCWNCGKEGHS 18 (49)
T ss_dssp CCCCCBCTTTCCBTCC
T ss_pred CCCcCeeeecCCCCcC
Confidence 4667889999987454
Done!