Query 002859
Match_columns 873
No_of_seqs 341 out of 2414
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 04:23:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002859.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002859hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 1E-163 4E-168 1489.6 88.4 846 5-871 64-962 (967)
2 4fke_A Aminopeptidase N; zinc 100.0 3E-160 9E-165 1467.0 74.2 848 3-871 4-904 (909)
3 2xdt_A Endoplasmic reticulum a 100.0 5E-158 2E-162 1443.1 87.5 840 5-869 4-892 (897)
4 1z5h_A Tricorn protease intera 100.0 6E-144 2E-148 1300.7 66.1 771 14-858 1-777 (780)
5 2gtq_A Aminopeptidase N; alani 100.0 4.2E-98 1E-102 904.3 54.0 720 6-776 9-790 (867)
6 3ebh_A PFA-M1, M1 family amino 100.0 6.5E-89 2.2E-93 814.4 62.4 701 11-755 11-789 (889)
7 3b34_A Aminopeptidase N; prote 100.0 7.2E-89 2.5E-93 820.3 61.2 704 6-760 32-793 (891)
8 3cia_A Cold-active aminopeptid 100.0 9.5E-83 3.2E-87 748.8 25.4 527 6-615 18-560 (605)
9 3u9w_A Leukotriene A-4 hydrola 100.0 6.2E-82 2.1E-86 742.3 28.3 448 7-473 6-474 (608)
10 2xq0_A LTA-4 hydrolase, leukot 100.0 2.8E-80 9.6E-85 729.6 23.6 528 7-616 21-589 (632)
11 3rjo_A Endoplasmic reticulum a 100.0 1.5E-74 5.1E-79 652.4 44.4 398 453-870 1-410 (419)
12 4fgm_A Aminopeptidase N family 99.9 8.2E-27 2.8E-31 270.3 20.9 302 145-455 111-450 (597)
13 2y3u_A Collagenase, collagenas 78.9 3.5 0.00012 48.4 7.8 113 218-336 327-469 (785)
14 1u4g_A Elastase, pseudolysin; 78.6 10 0.00035 39.2 10.4 97 230-337 73-174 (301)
15 1bqb_A Protein (aureolysin); h 78.4 5 0.00017 41.4 8.0 106 231-337 68-178 (301)
16 3cqb_A Probable protease HTPX 74.6 3.2 0.00011 35.8 4.6 70 236-314 27-99 (107)
17 3dnz_A Thermolysin; hydrolase, 71.9 5.7 0.0002 41.2 6.4 102 229-338 69-177 (316)
18 1lsh_A Lipovitellin (LV-1N, LV 70.0 13 0.00043 46.2 10.2 195 547-760 356-558 (1056)
19 4ger_A Gentlyase metalloprotea 69.4 6.8 0.00023 40.4 6.3 108 229-347 62-176 (304)
20 2vqx_A Metalloproteinase; ther 66.1 9.5 0.00032 40.0 6.7 105 229-338 89-197 (341)
21 2qk1_A Protein STU2; STU2P, XM 62.4 61 0.0021 32.3 12.0 98 562-669 29-135 (249)
22 3nqx_A MCP-02, secreted metall 60.6 39 0.0013 34.7 9.9 98 230-337 74-175 (306)
23 3c37_A Peptidase, M48 family; 44.5 25 0.00084 35.4 5.4 19 295-313 97-115 (253)
24 2ejq_A Hypothetical protein TT 38.8 10 0.00035 33.8 1.3 45 275-322 68-112 (130)
25 3isy_A Bsupi, intracellular pr 34.6 2.3E+02 0.0078 24.6 9.6 27 87-113 81-107 (120)
26 1r55_A ADAM 33; metalloproteas 32.8 36 0.0012 33.1 4.3 14 297-310 135-148 (214)
27 1yp1_A FII; FII hydrolase; 1.9 30.6 53 0.0018 31.5 5.1 14 297-310 134-147 (202)
28 2e19_A Transcription factor 8; 29.6 70 0.0024 24.3 4.6 49 814-872 10-58 (64)
29 2w15_A Zinc metalloproteinase 29.0 65 0.0022 30.9 5.4 14 297-310 135-148 (202)
30 1bud_A Protein (acutolysin A); 28.8 64 0.0022 30.8 5.3 14 297-310 132-145 (197)
31 1lyq_A PCOC copper resistance 27.9 1.7E+02 0.0058 24.7 7.2 57 46-106 19-86 (104)
32 2c9r_A COPC, copper resistance 27.7 1.8E+02 0.0062 24.3 7.3 58 45-106 17-84 (102)
33 3ltj_A Alpharep-4; protein eng 25.7 3.4E+02 0.012 25.0 10.1 89 656-757 28-116 (201)
34 3s51_A Protein FACI, fanconi a 24.9 1.3E+02 0.0043 37.4 7.8 136 545-685 39-184 (1308)
35 4aw6_A CAAX prenyl protease 1 24.0 53 0.0018 36.4 4.1 21 294-314 325-345 (482)
36 3iuk_A Uncharacterized protein 23.8 3.2E+02 0.011 30.8 10.5 54 403-456 495-554 (562)
37 1qua_A Acutolysin-C, hemorrhag 23.3 56 0.0019 31.2 3.8 14 297-310 134-147 (197)
38 1atl_A Atrolysin C; metalloend 23.1 55 0.0019 31.4 3.7 14 297-310 135-148 (202)
39 2ecc_A Homeobox and leucine zi 22.5 1.5E+02 0.005 23.5 5.3 21 814-834 10-30 (76)
40 2ero_A VAP-1, vascular apoptos 22.0 96 0.0033 33.7 5.7 14 297-310 145-158 (427)
41 1kuf_A Atrolysin E, metallopro 20.6 60 0.0021 31.2 3.3 14 297-310 137-150 (203)
42 3a03_A T-cell leukemia homeobo 20.4 2.2E+02 0.0074 20.6 5.7 46 814-869 4-49 (56)
43 3e11_A Predicted zincin-like m 20.4 59 0.002 28.1 2.8 35 274-310 68-102 (114)
44 3a02_A Homeobox protein arista 20.2 2.1E+02 0.0073 20.9 5.7 45 814-868 6-50 (60)
45 1oyz_A Hypothetical protein YI 20.1 6E+02 0.02 24.7 11.2 93 656-759 142-234 (280)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=1e-163 Score=1489.57 Aligned_cols=846 Identities=34% Similarity=0.594 Sum_probs=769.5
Q ss_pred CCCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCCCC--ccccceeEEEe
Q 002859 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS--KALEPTKVELV 82 (873)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~--~~~~~~~~~~~ 82 (873)
-..+|||.+++|.||+|.|++++++.+|+|+|+|++++.++++.|+||+++|+|.++++.+..+... .........++
T Consensus 64 ~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~ 143 (967)
T 3se6_A 64 WQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP 143 (967)
T ss_dssp CCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG
T ss_pred cccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec
Confidence 4568999999999999999999999999999999999999999999999999999999875321100 01112222333
Q ss_pred cCCeEEEEEeCCccCCc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeeeeccCCCcccccccccccCCCCCceEEEE
Q 002859 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (873)
Q Consensus 83 ~~~~~l~i~l~~~L~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i 160 (873)
.++.+.|.++++|++| .|+|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||++||+||||||||++||+|+|
T Consensus 144 -~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~i 222 (967)
T 3se6_A 144 -AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSI 222 (967)
T ss_dssp -GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEE
T ss_pred -CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEE
Confidence 5678999999999999 99999999999999999999999976 78889999999999999999999999999999999
Q ss_pred EEEeCCCCeEEecCCccce-eecCCeEEEEEecCCCccceEEEEEEeeeeeeeecc-cc--EEEEEeCCchhhHHHHHHH
Q 002859 161 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHT-SD--VRVYCQVGKANQGKFALNV 236 (873)
Q Consensus 161 ~i~~p~~~~~~sn~~~~~~-~~~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~~-~~--i~v~~~~~~~~~~~~~l~~ 236 (873)
+|++|++|+|+|||++.++ ...+++++++|++|||||+||+||+||+|+.++..+ .+ +++|++|+..++++++++.
T Consensus 223 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~ 302 (967)
T 3se6_A 223 KIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQA 302 (967)
T ss_dssp EEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHH
T ss_pred EEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHH
Confidence 9999999999999998765 345678899999999999999999999999987643 23 9999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccc
Q 002859 237 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 316 (873)
Q Consensus 237 ~~~~l~~~e~~fg~~yp~~k~d~v~~p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 316 (873)
+.+++++||++||+|||++|+|+|++|+|+.||||||||++|+|..+|+++..++...+++++.+||||+|||||||+||
T Consensus 303 ~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT 382 (967)
T 3se6_A 303 SLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382 (967)
T ss_dssp HHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEE
T ss_pred HHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred cCccchhhhhhhHHHHHHHHHHhhhCcchhHHHHHHHHHHHHHhhcccCCCCCeeeecCCchhhhhhccceeechhhHHH
Q 002859 317 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 396 (873)
Q Consensus 317 ~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 396 (873)
|+||+|+|||||||+|++++++++.+|+|.+...|+.+...++..|+..++||+..++.++.+++..|+.++|.||++||
T Consensus 383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL 462 (967)
T 3se6_A 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL 462 (967)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence 99999999999999999999999999999987777666557889999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc---------------------------cCCCHHHHHHHhh
Q 002859 397 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWT 449 (873)
Q Consensus 397 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------~~~~l~~~~~~W~ 449 (873)
|||+..||++.|+++|+.|+++|+|++++++|||++++++ +|.+|++||++|+
T Consensus 463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~ 542 (967)
T 3se6_A 463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT 542 (967)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence 9999999999999999999999999999999999999995 6889999999999
Q ss_pred cCCCcceEEEEEeCcEEEEEEEeeccCCCC---------CCCeeEEEEEEEEccccceeeEEeeccceEEEecccccccc
Q 002859 450 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI 520 (873)
Q Consensus 450 ~~~G~P~v~v~~~~~~~~l~Q~rf~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 520 (873)
.|+|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+|+..++.++.++.
T Consensus 543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------ 616 (967)
T 3se6_A 543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------ 616 (967)
T ss_dssp HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence 999999999999889999999999875432 23589999999987655445577776666666642
Q ss_pred cCCCCCCceEEeCCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCC
Q 002859 521 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEET 598 (873)
Q Consensus 521 ~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~ 598 (873)
.+ +||++|.++.||||||||+++|++|+++|..+ .|++.||||||+|+|+||++|.++|+.+|+|++||++|+
T Consensus 617 ---~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~ 691 (967)
T 3se6_A 617 ---KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHET 691 (967)
T ss_dssp ---CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCC
T ss_pred ---CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC
Confidence 34 89999999999999999999999999999753 699999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 002859 599 EYTVLSNLITISYKIGRIAADA-RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNE 677 (873)
Q Consensus 599 ~~~~w~~~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~~~~~c~~~ 677 (873)
+|+||.++++.|.+|.+++... .++.+..|++|+++++.++++++||+ +++++.++++|..++.+||.+|+++|+++
T Consensus 692 ~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~--~~~~~~~~~lR~~il~~ac~~g~~~c~~~ 769 (967)
T 3se6_A 692 SSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQK 769 (967)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSS--CCSCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCC--CCCcHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 9999999999999999988632 24578899999999999999999998 46889999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q 002859 678 ASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFL 757 (873)
Q Consensus 678 A~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~~l~aL~cs~d~~ll~~~L~~~ 757 (873)
|+++|++|++++....||||+|.+|||+++ + ++++|++||++|+++++++||..+|.||||++|+++|+++|+++
T Consensus 770 A~~~f~~~~~~~~~~~i~~~lr~~Vyc~~~---~--~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~ 844 (967)
T 3se6_A 770 AAELFSQWMESSGKLNIPTDVLKIVYSVGA---Q--TTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELG 844 (967)
T ss_dssp HHHHHHHHHHTTTCSCCCHHHHHHHHHHHT---T--SHHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcccCChhhhhHhHhhhh---c--cHHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 999999999875444699999999998764 3 48899999999999999999999999999999999999999999
Q ss_pred ccCc-CCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCCc
Q 002859 758 LSSE-VRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKP 832 (873)
Q Consensus 758 l~~~-i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~l~~~~~Ff~~~~~~ 832 (873)
+++. ||.||...++. ++.| |++++|+|+++||+.|.++|+.+ +.++++|..+++.|+|+++++++++||++++..
T Consensus 845 l~~~~i~~qd~~~~~~~v~~n~~g~~~~w~f~~~nw~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~l~~~~~f~~~~~~~ 924 (967)
T 3se6_A 845 MEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ 924 (967)
T ss_dssp HHCSSSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHTTTTTCCSHHHHHHHHHHHHHSCSS
T ss_pred hCcCcCcHhHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCcc
Confidence 9874 89999999998 8877 99999999999999999999854 689999999999999999999999999987654
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhhcc
Q 002859 833 -YIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR 871 (873)
Q Consensus 833 -~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wL~~~~~~ 871 (873)
...++++|++|+|+.|++|++++.+. |.+||+.|+++
T Consensus 925 ~~~~~~~~q~le~i~~ni~W~~~~~~~--i~~wl~~~~~~ 962 (967)
T 3se6_A 925 GSHLDIFQTVLETITKNIKWLEKNLPT--LRTWLMVNTRH 962 (967)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcccc
Confidence 34689999999999999999999999 99999999876
No 2
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=2.6e-160 Score=1466.97 Aligned_cols=848 Identities=33% Similarity=0.560 Sum_probs=761.4
Q ss_pred ccCCCCcCCCCceeeEEEEEEEecCCC-----CeEEEEEEEEEEEECCCCEEEEEeCCceeeEE----EEeeccCCCCcc
Q 002859 3 EFKGQPRLPKFAVPKRYDIRLTPDLTS-----CKFGGSVAIDVDVVGDTKFIVLNAADLTINNR----SVSFTNKVSSKA 73 (873)
Q Consensus 3 ~~~~~~rLp~~v~p~~Y~l~l~~~~~~-----~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v----~i~~~~~~~~~~ 73 (873)
++-++||||.+|+|+||+|.|+++++. ++|+|+|+|++++.++++.|+||+++|+|... .+.+. +....
T Consensus 4 ~P~~~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~i~~~~~~~~~~~~--~~~~~ 81 (909)
T 4fke_A 4 KPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYTTQGHMVVLRGV--GDSQV 81 (909)
T ss_dssp CGGGSSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCEECCSSSSCEEEES--TTCCC
T ss_pred CCcccccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCEEEeeeeEEEEecC--CCcce
Confidence 445789999999999999999998753 58999999999999999999999999999763 33321 12233
Q ss_pred ccceeEEEecCCeEEEEEeCCccCCc-eEEEEEEEEeeeCCCCcceEEeeeccCCeeeeeeccCCCcccccccccccCCC
Q 002859 74 LEPTKVELVEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEP 152 (873)
Q Consensus 74 ~~~~~~~~~~~~~~l~i~l~~~L~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep 152 (873)
.......++...+.++|.++++|++| .|+|+|.|+|++++++.|||++.|.++|.++++++|||||++||+||||||||
T Consensus 82 ~~~~~~~~~~~~~~l~i~l~~~l~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~~~~~~~~Tqfep~~AR~~FPc~DeP 161 (909)
T 4fke_A 82 PEIDRTELVELTEYLVVHLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEP 161 (909)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEECTTCEEEEEEEEEEECCSSSSEEEEEEEEETTEEEEEEEEECTTTTGGGTSCBCCST
T ss_pred ecccceEEecCCcEEEEEcCCCcCCCCEEEEEEEEEEEECCCCeEEEEeeEEECCceEEEEEEcCcccCcCEEEEeCCcc
Confidence 45567788899999999999999999 89999999999999999999999998888999999999999999999999999
Q ss_pred CCceEEEEEEEeCCCCeEEecCCcccee----ecCCeEEEEEecCCCccceEEEEEEeeeeeeeecccc---EEEEEeCC
Q 002859 153 ACKATFKITLDVPSELVALSNMPVIDEK----VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSD---VRVYCQVG 225 (873)
Q Consensus 153 ~~ka~f~i~i~~p~~~~~~sn~~~~~~~----~~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~~~~---i~v~~~~~ 225 (873)
++||+|+|+|++|++|+|+|||++.++. .++++++++|++||||||||+||+||+|..++....+ +++|++|+
T Consensus 162 ~~KAtf~i~i~~p~~~~alSN~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~ 241 (909)
T 4fke_A 162 AMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPN 241 (909)
T ss_dssp TSCBEEEEEEEEETTSEEEESSCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHH
T ss_pred ccceEEEEEEEECCCCEEEcCCcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecc
Confidence 9999999999999999999999988652 2467899999999999999999999999998866543 99999998
Q ss_pred chh--hHHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeccccccccCCCChhHHHHHHHHHHH
Q 002859 226 KAN--QGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVA 303 (873)
Q Consensus 226 ~~~--~~~~~l~~~~~~l~~~e~~fg~~yp~~k~d~v~~p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~ia 303 (873)
..+ +++++++.+.+++++||++||+|||++|+|+|++|+|+.||||||||++|+|..+|+++..++...+++++.+||
T Consensus 242 ~~~~~~~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~via 321 (909)
T 4fke_A 242 AIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIA 321 (909)
T ss_dssp HHHTTTTHHHHHHHHHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHH
Confidence 644 567999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCccccCccchhhhhhhHHHHHHHHHHhhhCcchhHHHHHHHHHH-HHHhhcccCCCCCeeee---cCCchh
Q 002859 304 HELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVE---VNHTGE 379 (873)
Q Consensus 304 HElaHqWfGnlVt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~pi~~~---~~~~~~ 379 (873)
||+|||||||+|||+||+|+|||||||+|++++++++.+|+|.++..|..... .++..|+..++||+..+ +.++.+
T Consensus 322 HElAHqWFGnlVT~~~W~dlWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~~~~v~~~~~ 401 (909)
T 4fke_A 322 HELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQ 401 (909)
T ss_dssp HHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCCGGGCCSHHH
T ss_pred HHHHhhhhcCeecccccCcceeehHHHHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCccccccccCChhh
Confidence 99999999999999999999999999999999999999999999888877665 67889999999999875 677889
Q ss_pred hhhhccceeechhhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCC--------CHHHHHHHhhcC
Q 002859 380 IDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE--------PVNKLMNSWTKQ 451 (873)
Q Consensus 380 ~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~--------~l~~~~~~W~~~ 451 (873)
++..|+.++|.||++|||||+..||++.|++||+.|+++|+|+|++++|||++|++++|. +|++||++|++|
T Consensus 402 i~~~fd~i~Y~KGa~vL~mL~~~lG~e~F~~gl~~Yl~~~~~~na~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~W~~q 481 (909)
T 4fke_A 402 ISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQ 481 (909)
T ss_dssp HHTTSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHHHHSS
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcccccccchhHHhHhhCcccc
Confidence 999999999999999999999999999999999999999999999999999999999864 599999999999
Q ss_pred CCcceEEEEEeCcEEEEEEEeeccCCCC-------CCCeeEEEEEEEEccccceeeEEeec-cceEEEecccccccccCC
Q 002859 452 KGYPVISVKVKEEKLELEQSQFLSSGSP-------GDGQWIVPITLCCGSYDVCKNFLLYN-KSDSFDIKELLGCSISKE 523 (873)
Q Consensus 452 ~G~P~v~v~~~~~~~~l~Q~rf~~~~~~-------~~~~w~iPl~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 523 (873)
+|||+|+|+++.+. ++|+||+..... .+..|+|||++++.+..... .++.. ......+.. ..
T Consensus 482 ~G~Pvv~V~~~~~~--~~q~~~~~~~~~~~~~~~~~~~~w~IPl~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~ 551 (909)
T 4fke_A 482 MGFPVITVDTKTGN--ISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDH-YWLRDVSQAQNDLFK-------TA 551 (909)
T ss_dssp CSCEEEEEETTTTE--EEEEECCSCTTCCCCSCCTTTTCCCEEECEEETTEECCC-EEECSCSEEECGGGC-------CC
T ss_pred CCCcEEEEEeccCc--EEEEEEEeccCCCCCCCCCCCceEEEEEEEEeCCCccce-EEeeccccceeeecc-------CC
Confidence 99999999887765 678888765421 12379999999876543222 33332 222222221 22
Q ss_pred CCCCceEEeCCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHH
Q 002859 524 GDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYT 601 (873)
Q Consensus 524 ~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~ 601 (873)
.+ +||++|.+++||||||||+++|.+|+++|+.+ .|++.||+|||+|+|+||++|.++++.+|++++||++|++|+
T Consensus 552 ~~--~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag~~~~~~~l~l~~~l~~E~~y~ 629 (909)
T 4fke_A 552 SD--DWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKEYM 629 (909)
T ss_dssp TT--CCEEESGGGCSSCEEEECHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHTTGGGGGCCSHH
T ss_pred CC--CeEEECCCceEEEEEecCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCccHH
Confidence 34 89999999999999999999999999999864 799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHcCCccC----CCCCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 002859 602 VLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSK----PGESHLDALLRGEIFTALALLGHKETLNE 677 (873)
Q Consensus 602 ~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~----~~~~~~~~~lr~~il~~ac~~~~~~c~~~ 677 (873)
||.++++.|.+|..++.+ ++.+..|++|+++++.++++++||... .++++.++++|..++.+||..|+++|+++
T Consensus 630 ~w~~~~~~l~~l~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lr~~~l~~ac~~g~~~c~~~ 707 (909)
T 4fke_A 630 PWQAALSSLSYFSLMFDR--SEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGLPQCENL 707 (909)
T ss_dssp HHHHHHHHHHHHHHHHTT--STTHHHHHHHHHHHHHHHHHHHHHHTTTTTSCCSSHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 999999999999999876 447899999999999999999976432 35788999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q 002859 678 ASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFL 757 (873)
Q Consensus 678 A~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~~l~aL~cs~d~~ll~~~L~~~ 757 (873)
|+++|++|++++++++||||+|.+|||+ |+++|++++|+++|++|+++++++||..+|.||||++|+++|+++|+++
T Consensus 708 a~~~f~~~~~~~~~~~i~~dlr~~vy~~---~~~~g~~~~~~~l~~~~~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~ 784 (909)
T 4fke_A 708 AKTLFDQWMSDPENNPIHPNLRSTIYCN---AIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYT 784 (909)
T ss_dssp HHHHHHHHHTCTTSCCSCTTTHHHHHHH---HHHHSCHHHHHHHHHHHHHCCSHHHHHHHHHHHTTCCCHHHHHHHHHHT
T ss_pred HHHHHHHHhhCCCCCcCCHHHHHHHHHH---HHHhCCHHHHHHHHHHHHccCCHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 9999999998877788999999988865 5568999999999999999999999999999999999999999999999
Q ss_pred ccC-cCCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCC-
Q 002859 758 LSS-EVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCK- 831 (873)
Q Consensus 758 l~~-~i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~l~~~~~Ff~~~~~- 831 (873)
+++ .||+||...+|. ++.| |++++|+|+++||+.|.++|+++ +.++++|..+++.|+|+++++++++||++++.
T Consensus 785 l~~~~ir~qd~~~~~~~v~~n~~g~~~~~~f~~~n~~~l~~~~~~~~~~~~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~ 864 (909)
T 4fke_A 785 LNPDLIRKQDATSTINSIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDV 864 (909)
T ss_dssp TCTTTSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHCTTTTTSSSSCCCCHHHHHHHHHTTCCSHHHHHHHHHHHTTCSSS
T ss_pred hCCCCCchhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCcc
Confidence 987 599999999999 8777 99999999999999999999865 67999999999999999999999999998764
Q ss_pred --chHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhhcc
Q 002859 832 --PYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR 871 (873)
Q Consensus 832 --~~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wL~~~~~~ 871 (873)
++..++++|++|+|+.|++|++++.+. |.+||++|..+
T Consensus 865 ~~~~~~~~~~~~le~i~~n~~w~~~~~~~--i~~wL~~n~s~ 904 (909)
T 4fke_A 865 GFGSGTRALEQALEKTKANIKWVKENKEV--VLNWFIEHSSH 904 (909)
T ss_dssp CCGGGTTHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHCC-
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHhcCcc
Confidence 356799999999999999999999999 99999998654
No 3
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=4.7e-158 Score=1443.12 Aligned_cols=840 Identities=32% Similarity=0.578 Sum_probs=767.0
Q ss_pred CCCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCCCCccc--cceeEEEe
Q 002859 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKAL--EPTKVELV 82 (873)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~--~~~~~~~~ 82 (873)
-.++|||.+++|.||+|.|++|+++.+|+|+++|++++.++++.|+||+.+|+|.++++.+.++ ..+ ....+..+
T Consensus 4 ~~~~rLp~~~~p~hY~l~L~~d~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~v~~~~~---~~~~~~~~~~~~~ 80 (897)
T 2xdt_A 4 WNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAG---ERLSEEPLQVLEH 80 (897)
T ss_dssp CCCSSCCSSEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCEEEEEEECSSCEEEEEEEEEC-------CEEEECEEEEE
T ss_pred cccCcCCCCcEeeEEEEEEEEecCCCeEEEEEEEEEEEEcCCCEEEEEeCCCEEEEEEEEecCC---cccccccceeEEc
Confidence 3578999999999999999999999999999999999998899999999999999999975311 122 23445667
Q ss_pred cCCeEEEEEeCCccCCc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeeeeccCCCcccccccccccCCCCCceEEEE
Q 002859 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (873)
Q Consensus 83 ~~~~~l~i~l~~~L~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i 160 (873)
..++.++|.++++|.+| .|+|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||.+||+||||||||++||+|+|
T Consensus 81 ~~~~~l~i~l~~~L~~g~~~~L~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~i 160 (897)
T 2xdt_A 81 PRQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSI 160 (897)
T ss_dssp TTTTEEEEEEEEEECTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTHHHHSCBCCSTTSCBEEEE
T ss_pred CCCcEEEEEeCCccCCCCEEEEEEEEEEEeCCCCceeEeeeeecCCCceeEEEEecceecccceEEeccCCccccCeEEE
Confidence 77889999999999999 79999999999999999999999965 68888999999999999999999999999999999
Q ss_pred EEEeCCCCeEEecCCcccee-ecCCeEEEEEecCCCccceEEEEEEeeeeeeeec-ccc--EEEEEeCCchhhHHHHHHH
Q 002859 161 TLDVPSELVALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH-TSD--VRVYCQVGKANQGKFALNV 236 (873)
Q Consensus 161 ~i~~p~~~~~~sn~~~~~~~-~~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~-~~~--i~v~~~~~~~~~~~~~l~~ 236 (873)
+|++|++|+|+|||++.++. ..+++++++|+.+||||||++||+||+|+.++.. ..+ +++|++|+..+.++++++.
T Consensus 161 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~~ 240 (897)
T 2xdt_A 161 KIRREPRHLAISNMPLVKSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDA 240 (897)
T ss_dssp EEEECTTCEEEESSCEEEEEEEETTEEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCHHHHHH
T ss_pred EEEEcCCceEecCCCccceEecCCCEEEEEEeCCCccchhheEEEEEcceeeccccCCCeeEEEEcCCChHHHHHHHHHH
Confidence 99999999999999988763 4567889999999999999999999999998863 233 9999999999899999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccc
Q 002859 237 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 316 (873)
Q Consensus 237 ~~~~l~~~e~~fg~~yp~~k~d~v~~p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 316 (873)
+.+++++|+++||+|||++|+|+|++|+|+.||||||||++|+|..+|+++..++...++.++.+||||+|||||||+||
T Consensus 241 ~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlVT 320 (897)
T 2xdt_A 241 AVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVT 320 (897)
T ss_dssp HHHHHHHHHHHTTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEE
T ss_pred HHHHHHHHHHHhCCCCCccceeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred cCccchhhhhhhHHHHHHHHHHhhhCcchhHHHHHHHHHHHHHhhcccCCCCCeeeecCCchhhhhhccceeechhhHHH
Q 002859 317 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 396 (873)
Q Consensus 317 ~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 396 (873)
|+||+|+|||||||+|++++++++.+|+|.++.+|......++..|+..++||+..++.+|.+++..|+.++|.||++||
T Consensus 321 ~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f~~~~~~a~~~D~~~~~~Pi~~~v~~p~~i~~~fd~i~Y~KGa~vl 400 (897)
T 2xdt_A 321 MEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKGACIL 400 (897)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCGGGGHHHHHHHHHHHHTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCcchhhhhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhcccCCCCCEEeCCCHHHHHHhcchhhhhhHHHHH
Confidence 99999999999999999999999999999988888444447788899999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc-------------------c--------CCCHHHHHHHhh
Q 002859 397 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG-------------------S--------GEPVNKLMNSWT 449 (873)
Q Consensus 397 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~-------------------~--------~~~l~~~~~~W~ 449 (873)
|||+..||++.|+++|+.|+++|+|++++++|||++++++ + |.|+++||++|+
T Consensus 401 ~mL~~~lG~e~F~~gl~~Yl~~~~~~~a~~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~ 480 (897)
T 2xdt_A 401 NMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTDGVKGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWT 480 (897)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTC----------------------------CCCHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCHHHHHHHhh
Confidence 9999999999999999999999999999999999999996 5 899999999999
Q ss_pred cCCCcceEEEEEeCcEEEEEEEeeccCCCC---CCCeeEEEEEEEEccccceeeEEeeccceEEEecccccccccCCCCC
Q 002859 450 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDN 526 (873)
Q Consensus 450 ~~~G~P~v~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 526 (873)
+|+|||+++|++++++++|+|+||+.++.. ....|+|||+|.++++.....+|+..++.++.++. .+
T Consensus 481 ~q~G~P~l~v~~~~~~~~l~Q~~f~~~~~~~~~~~~~w~iPi~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~- 550 (897)
T 2xdt_A 481 LQKGFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV- 550 (897)
T ss_dssp SSCSEEEEEEEEETTEEEEEEEEECCC-----CCCCCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC-
T ss_pred cCCCceEEEEEEcCCEEEEEEEEeecCCCCCCCCCceEEEEEEEEeCCCCccceEEecCCceEEEccC---------CC-
Confidence 999999999999988999999999876532 24589999999876554445688877666666532 34
Q ss_pred CceEEeCCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHH
Q 002859 527 GGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLS 604 (873)
Q Consensus 527 ~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~ 604 (873)
+||++|.++.||||||||+++|+.|+.+|..+ .|++.+|||||+|+|+||++|.++|+.+|+|++||++|++|+||.
T Consensus 551 -~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~~~~w~ 629 (897)
T 2xdt_A 551 -EWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVF 629 (897)
T ss_dssp -SCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTTSSCHHHHHHHHGGGGGCCCHHHHH
T ss_pred -ceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 79999999999999999999999999999753 699999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccChhHH---HHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 002859 605 NLITISYKIGRIAADARPELL---DYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKR 681 (873)
Q Consensus 605 ~~~~~l~~l~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~~~~~c~~~A~~~ 681 (873)
++++.|.+|.+++...+ .+ ..|++|+++++.+++++|||+. ++++.++++|..++.+||.+|+++|+++|+++
T Consensus 630 ~~~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~lg~~~--~~~~~~~~lr~~~~~~ac~~g~~~c~~~a~~~ 705 (897)
T 2xdt_A 630 QGLNELIPMYKLMEKRD--MNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGY 705 (897)
T ss_dssp HHHHHHHHHHHHHHTSS--CHHHHHHHHHHHHHHHHHHHHTCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCh--hhhHHHHHHHHHHHHHHHHHHHcCCCC--CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 99999999999987532 45 7899999999999999999987 67899999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhccC-
Q 002859 682 FHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSS- 760 (873)
Q Consensus 682 f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~~l~aL~cs~d~~ll~~~L~~~l~~- 760 (873)
|++|++++..+.||||+|.+|||++ + |++++|++||++|+++++++||..+|.||||++|+++|+++|++++++
T Consensus 706 f~~~~~~~~~~~i~~~lr~~vy~~~---~--g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~c~~~~~~l~~~L~~~~~~~ 780 (897)
T 2xdt_A 706 FRKWKESNGNLSLPVDVTLAVFAVG---A--QSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGD 780 (897)
T ss_dssp HHHHHHTTTCSCCCHHHHHHHHHHH---T--TSHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCS
T ss_pred HHHHhcCCCcCCCCcchhhhEEEEe---c--CCHHHHHHHHHHHHccCCHHHHHHHHHHhccCCCHHHHHHHHHHHhCCC
Confidence 9999987544589999999888765 3 899999999999999999999999999999999999999999999975
Q ss_pred cCCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCC-chHH
Q 002859 761 EVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCK-PYIA 835 (873)
Q Consensus 761 ~i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~l~~~~~Ff~~~~~-~~~~ 835 (873)
.||.||...+|. ++.| |++++|+|+++||+.|.++||++ +.++++|..+++.|+|+++++++++||+.++. .+..
T Consensus 781 ~i~~qd~~~~~~~v~~n~~g~~~~~~~~~~n~~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~~~~~ 860 (897)
T 2xdt_A 781 KIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKENGSQL 860 (897)
T ss_dssp SSCGGGHHHHHHHHHTSTTTHHHHHHHHHHTHHHHHHHHCTTCHHHHHHHHHTTTTCCSHHHHHHHHHHHHHTGGGTTTC
T ss_pred CCcHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCccchhH
Confidence 599999999998 8776 99999999999999999999854 67899999999999999999999999998643 3567
Q ss_pred HHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 002859 836 RTLRQSIERVQINAKWVESIRNEGHLAEAVKELA 869 (873)
Q Consensus 836 ~~~~~~le~i~~ni~W~~~~~~~~~i~~wL~~~~ 869 (873)
+++++++|+|+.|++|++++.+. |.+||+++.
T Consensus 861 ~~~~~~le~i~~n~~w~~~~~~~--i~~wl~~~~ 892 (897)
T 2xdt_A 861 RCVQQTIETIEENIGWMDKNFDK--IRVWLQSEK 892 (897)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhCHHH--HHHHHHhhh
Confidence 89999999999999999999999 999999863
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=5.7e-144 Score=1300.67 Aligned_cols=771 Identities=32% Similarity=0.559 Sum_probs=701.1
Q ss_pred ceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCCCCccccceeEEEecCCeEEEEEeC
Q 002859 14 AVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFA 93 (873)
Q Consensus 14 v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~ 93 (873)
|+|.||+|.|++++++.+|+|+|+| + ++++.|+||+.+|+|.++++++. +..+.++. +.++|.++
T Consensus 1 v~p~hY~l~l~~~~~~~~f~G~v~I--~--~~~~~i~L~~~~l~I~~v~~~g~---------~~~~~~~~--~~l~i~~~ 65 (780)
T 1z5h_A 1 MEVEKYDLTLDFDIQKRTFNGTETI--T--ADAGDIVLDAVGLQINWMKVNGR---------DTAFTYDG--QTVRAPGD 65 (780)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEE--E--ECSSCEEEECSSCEEEEEEETTE---------ECCCEECS--SEEEECCC
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEE--E--cCCCEEEEEccCCEEEEEEEece---------eccEEEEC--CEEEEEeC
Confidence 6899999999999999999999999 4 67899999999999999998541 23344444 37777765
Q ss_pred CccCCceEEEEEEEEeeeCCCCcceEEeeeccCCeeeeeeccCCCcccccccccccCCCCCceEEEEEEEeCCCCeEEec
Q 002859 94 ETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSN 173 (873)
Q Consensus 94 ~~L~~g~~~l~i~y~g~l~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i~i~~p~~~~~~sn 173 (873)
+|.++|+|.|+|.+++++.|||++.|. +++++|||||.+||+||||||||.+||+|+|+|++|++|+|+||
T Consensus 66 ----~g~~~l~i~y~g~~~~~~~G~y~~~y~-----~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lSN 136 (780)
T 1z5h_A 66 ----SQPQKIEISFAGKVSDSLSGIYYAGRE-----NGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISN 136 (780)
T ss_dssp ----SSSEEEEEEEEEECBSSSSEEEEESST-----TCEEEEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEES
T ss_pred ----CccEEEEEEEEEEeCCCcccceecccc-----ceEEEEccccCChhheeecCCCcccccEEEEEEEECCCCEEEeC
Confidence 388999999999999999999999876 68899999999999999999999999999999999999999999
Q ss_pred CCccceeecCCeEEEEEecCCCccceEEEEEEeeeeeeeecccc--EEEEEeCCchhhHHHHHHHHHHHHHHHHHHhCCC
Q 002859 174 MPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSD--VRVYCQVGKANQGKFALNVAVKTLELYKEYFAVP 251 (873)
Q Consensus 174 ~~~~~~~~~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~~~~--i~v~~~~~~~~~~~~~l~~~~~~l~~~e~~fg~~ 251 (873)
|++.++ ..+++++++|+.+||||+|++||++|+|+.++....+ +++|++|+ ..++++++.+.+++++|+++||+|
T Consensus 137 ~~~~~~-~~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~~gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg~~ 213 (780)
T 1z5h_A 137 MPPKRI-EVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYRDIDLILASLKD--IRSKYPLDMARKSVEFYENYFGIP 213 (780)
T ss_dssp SCEEEE-EESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEETTEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHSSC
T ss_pred Cccccc-cCCCceEEEEecCCcccceEEEEEEeccEEEeeccCCeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhCCC
Confidence 998765 4567888999999999999999999999998865445 99999998 677999999999999999999999
Q ss_pred CCCCCcceeecCCCCcccccccccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccccCccchhhhhhhHHH
Q 002859 252 YSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFAT 331 (873)
Q Consensus 252 yp~~k~d~v~~p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~d~WL~EGfa~ 331 (873)
||++|+|+|++|+|+.|||||||+++|+|..++++ +.++...++.++.+||||+|||||||+|||+||+|+|||||||+
T Consensus 214 YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~-~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfA~ 292 (780)
T 1z5h_A 214 YALPKMHLISVPEFGAGAMENWGAITFREIYMDIA-ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFAT 292 (780)
T ss_dssp CSSSEEEEEEETTCTTCEECCTTEEEEEHHHHSCC-TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHHH
T ss_pred CCCccCCEEEcCCCCCCcccccCeeEeecceEeec-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCcccccccHHHHH
Confidence 99999999999999999999999999999999999 66778888899999999999999999999999999999999999
Q ss_pred HHHHHHHhhhCcchhHHHHHHHHHH-HHHhhcccCCCCCeeeecCCchhhhhhccceeechhhHHHHHHHHhhCHHHHHH
Q 002859 332 WVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQR 410 (873)
Q Consensus 332 y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~ 410 (873)
|++++++++.+|+|.++.+|..... .++..|+..++||+..++.++.+++..|+.++|.||++|||||+..||++.|++
T Consensus 293 y~~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~~~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~~ 372 (780)
T 1z5h_A 293 FMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFRK 372 (780)
T ss_dssp HHHHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHHH
Confidence 9999999999999998888886655 678889999999999998899999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEeCcEEEEEEEeeccCCCCCCCeeEEEEEE
Q 002859 411 SLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITL 490 (873)
Q Consensus 411 ~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~G~P~v~v~~~~~~~~l~Q~rf~~~~~~~~~~w~iPl~~ 490 (873)
+|+.|+++|+|++++++|||+++++++|.|+++||++|++|+|+|+++|++++++++|+|+||..++ ..+..|+|||++
T Consensus 373 ~l~~yl~~~~~~~~t~~Dl~~~l~~~sg~dl~~~~~~W~~~~G~P~l~v~~~~~~~~l~Q~~f~~~~-~~~~~w~iPi~~ 451 (780)
T 1z5h_A 373 GISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNG-EEEGRWPVPVNI 451 (780)
T ss_dssp HHHHHHHHHTTEEECHHHHHHHHHHHHCSCHHHHHHHHHHSCSCEEEEEEESSSEEEEEEEECCSSC-CEECCCCEEEEE
T ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHhCCCHHHHHHHHHhCCCCceEEEEecCcEEEEEEEEecCCC-CCCceEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999998889999999998765 334589999999
Q ss_pred EEccccceeeEEeeccceEEEecccccccccCCCCCCceEEeCCCceeEEEEEcCHHHHHHHHHHHHhcCCChhhHHHHH
Q 002859 491 CCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGIL 570 (873)
Q Consensus 491 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~Ra~li 570 (873)
+.++. ...+ +..+ ++.++. . +||++|.++.||||||||+++|+.|+++| ..|++.+|+|||
T Consensus 452 -~~~~~-~~~~-l~~~--~~~~~~----------~--~~i~~N~~~~gyyrv~Yd~~~~~~l~~~l--~~i~~~~Ra~li 512 (780)
T 1z5h_A 452 -KKKDG-VERI-LLED--EASIEA----------D--GLIKINADSAGFYRVLYDDATFSDVMGHY--RDLSPLDRIGLV 512 (780)
T ss_dssp -EETTE-EEEE-EECS--SEEEEC----------T--TEEEESGGGCSSSEEECCHHHHHHHHHTG--GGCCHHHHHHHH
T ss_pred -cCCCc-eeee-ccCc--eEEccC----------C--ceEEEeCCCCEEEEEECCHHHHHHHHHHh--ccCCHHHHHHHH
Confidence 44332 2334 5543 345542 2 69999999999999999999999999987 468999999999
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHcCCccCCC
Q 002859 571 DDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPG 650 (873)
Q Consensus 571 ~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~ 650 (873)
+|+|+||++|.++|+.+|+|++||++|++|+||.++++.|.++.++ . ..|+.|+++++.+++++|| .+
T Consensus 513 ~D~~~l~~~g~~~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~~~~~--~------~~~~~~~~~l~~~~~~~l~--~~-- 580 (780)
T 1z5h_A 513 DDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRML--T------HAFDDDARAFCRSRMQFLT--GK-- 580 (780)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHGGGTTCCCHHHHHHHHHHHHHHHTT--C------STTHHHHHHHHHHHHHHHT--TC--
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHhc--h------HHHHHHHHHHHHHHHHHcC--CC--
Confidence 9999999999999999999999999999999999999999988765 2 2488999999999999999 32
Q ss_pred CCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCC
Q 002859 651 ESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDL 730 (873)
Q Consensus 651 ~~~~~~~lr~~il~~ac~~~~~~c~~~A~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~ 730 (873)
+++.+.++|..++.+||..|+++|++ |+++|++| ..||||+|.+|||++ +++|++ |++|+++|+++++
T Consensus 581 ~~~~~~~~r~~~~~~a~~~~~~~~~~-a~~~f~~~------~~i~~~lr~~v~~~~---~~~g~~--~~~l~~~~~~~~~ 648 (780)
T 1z5h_A 581 QDENLKIALGRVSRLYVMVDESYAEE-MSKLFKDF------DSAEPEMRSSIATAY---ALVTGD--LKGLLEKFRSVDR 648 (780)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHH-HHTTGGGG------GGSCHHHHHHHHHHH---HHHTCC--HHHHHHHHHSCCS
T ss_pred CChHHHHHHHHHHHHHHhcCCHHHHH-HHHHHHhc------CCCCHHHHHHHHHHH---HHcCcH--HHHHHHHHhcCCC
Confidence 78899999999999999999999999 99999998 259999999888765 457876 9999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhccCcCCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCCcchHHHHH
Q 002859 731 SQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSGFLITRFIS 807 (873)
Q Consensus 731 ~~ek~~~l~aL~cs~d~~ll~~~L~~~l~~~i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~~~l~~~i~ 807 (873)
++||..+|.||||++|+++++++|++++++.++.||...++. ++.| |++++|+|+++||+.|.+++++.+.+++++.
T Consensus 649 ~~~~~~~l~al~~~~~~~~~~~~l~~~~~~~i~~qd~~~~~~~~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~~~~i~ 728 (780)
T 1z5h_A 649 DEDRVRIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDRIIRLVIRYFTGNRTASRTVE 728 (780)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTSHHHHHHHHHTHHHHHHHHHHHHCSSSHHHHHHH
T ss_pred HHHHHHHHHHhccCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 999999999999999999999999999987799999999988 7655 9999999999999999999986678899999
Q ss_pred HhhccCCCHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhcCh
Q 002859 808 SIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNE 858 (873)
Q Consensus 808 ~~~~~~~t~~~l~~~~~Ff~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~ 858 (873)
.+ +.|+|++ ++++++||+.++.++..++++|++|+|+.|++|++++.+.
T Consensus 729 ~~-~~~~t~~-~~~~~~f~~~~~~~~~~~~~~~~~e~i~~n~~w~~~~~~~ 777 (780)
T 1z5h_A 729 MM-IPVIGLD-HPDAEDIVRNIGSKNISMGLAKGIEMLAVNRKLVERIRQT 777 (780)
T ss_dssp HH-HHHHHHH-CTTHHHHHHTTCCTTSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hh-hccCCHH-HHHHHHHHccCCCccHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 99 9999999 9999999998876778899999999999999999998765
No 5
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=4.2e-98 Score=904.27 Aligned_cols=720 Identities=17% Similarity=0.234 Sum_probs=578.0
Q ss_pred CCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCCCCccccceeEEEecCC
Q 002859 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEAD 85 (873)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~~~ 85 (873)
.++|+|...+| ||+|++++++...+++|+++|++. .+++.|+||+.+ +|.+|++++. ... +..++
T Consensus 9 ~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~--~~~~~i~Ld~~~-~I~sv~v~g~---------~~~--~~~~~ 73 (867)
T 2gtq_A 9 KDYQTPAYHIL-KTDLHFDINEPQTVVKSRLTVEPQ--RVGEPLVLDGSA-KLLSVKINGA---------AAD--YVLEG 73 (867)
T ss_dssp GGCCCCSEEEE-EEEEEEEECSSCEEEEEEEEEEES--STTSCEEEECCS-EEEEEEETTE---------ECC--CEEET
T ss_pred cccCCCCCcee-EEEEEEEEECCcEEEEEEEEEEEe--CCCCEEEEecCC-CEEEEEECCe---------ecc--eEeeC
Confidence 56888887777 899999999988888888777643 447899999999 9999999642 122 33335
Q ss_pred eEEEEEeCCccCCceEEEEEEEEeee--CCCCcceEEeeeccCCeeeeeeccCCCcccccccccccCCCCCceEEEEEEE
Q 002859 86 EILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLD 163 (873)
Q Consensus 86 ~~l~i~l~~~L~~g~~~l~i~y~g~l--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i~i~ 163 (873)
+.++|. +|++|.++|+|.|++.. ++.+.|+|++. .+++|||||.+||+||||||+|.+||+|+++|+
T Consensus 74 ~~L~I~---~lp~g~~~l~I~y~~~p~~~~~~~Gly~s~--------~~~~Tq~ep~~AR~~fPc~DeP~~katf~itIt 142 (867)
T 2gtq_A 74 ETLTIA---GVPSERFTVEVETEILPAENKSLMGLYASG--------GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIV 142 (867)
T ss_dssp TEEEES---CCCSSCEEEEEEEEECGGGCCSCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCBEEEEEEE
T ss_pred CEEEEE---ecCCCcEEEEEEEEEeccCCCCCcEEEEEC--------CEEEEeeccCCCceeeccCCCCCcceEEEEEEE
Confidence 677775 46568999999998864 45678999874 277899999999999999999999999999999
Q ss_pred eCCC-C-eEEecCCcccee-ecCCeEEEEEecCCCccceEEEEEEeeeeeeeec----cc-c--EEEEEeCCchhhHHHH
Q 002859 164 VPSE-L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH----TS-D--VRVYCQVGKANQGKFA 233 (873)
Q Consensus 164 ~p~~-~-~~~sn~~~~~~~-~~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~----~~-~--i~v~~~~~~~~~~~~~ 233 (873)
+|++ | +++|||+++++. ..+++++++|+.++|||+|++||++|+|..++.. .+ + +++|++|+..+.++++
T Consensus 143 ~p~~~y~~~lSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~a 222 (867)
T 2gtq_A 143 ADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFA 222 (867)
T ss_dssp EETTTCCEEEESSEEEEEEECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHH
T ss_pred EccccceEEEeCCccccceeecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccccHHHHHHH
Confidence 9997 6 899999988764 3567889999999999999999999999988753 12 1 8999999998899999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcC
Q 002859 234 LNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 313 (873)
Q Consensus 234 l~~~~~~l~~~e~~fg~~yp~~k~d~v~~p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn 313 (873)
++.+.+++++||++||+|||++|+++|++|+|..||||||||++|++..++++++.++...++.+..+||||+|||||||
T Consensus 223 l~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfGn 302 (867)
T 2gtq_A 223 VESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGN 302 (867)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999887777788899999999999999999
Q ss_pred ccccCccchhhhhhhHHHHHHHHHHhhhCcch-hHHHHHHHHHHHHHhhcccCCCCCeeeecCCchhhhhhccceeechh
Q 002859 314 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKG 392 (873)
Q Consensus 314 lVt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg 392 (873)
+|||+||+++|||||||+|++..+.....+.. .............+..|+...+||+.. .++.+++..|+.++|.||
T Consensus 303 lVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~KG 380 (867)
T 2gtq_A 303 RVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPVRP--ASYEEMNNFYTMTVYEKG 380 (867)
T ss_dssp TBEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSTTCCCSSC--SEESCGGGGCSHHHHHHH
T ss_pred EEEecccccccchHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhhhccCccCCCCcC--CChhhhhhhccchhhhHH
Confidence 99999999999999999999988887766531 111111000112466788888999864 345677888999999999
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEe--Cc--EEEE
Q 002859 393 ASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVK--EE--KLEL 468 (873)
Q Consensus 393 ~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~G~P~v~v~~~--~~--~~~l 468 (873)
++|||||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|++.| ++|++|+|+|+++|++. .+ +++|
T Consensus 381 a~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~~t~~Df~~~l~~~sg~dl~~f-~~W~~q~G~P~l~v~~~~~~~~~~l~l 459 (867)
T 2gtq_A 381 AEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQF-ALWYSQAGTPVLEAEGRLKNNIFELTV 459 (867)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHTCCCGGG-GHHHHCCSCCEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCCHHHH-HHHhcCCCCceEEEEEEecCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999999985 79999999999999975 34 4889
Q ss_pred EEEeeccCCCCCCCeeEEEEEEEEcc--ccc-----------eeeEEeeccceEEEecccccccccCCCCCCceEEeCCC
Q 002859 469 EQSQFLSSGSPGDGQWIVPITLCCGS--YDV-----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVN 535 (873)
Q Consensus 469 ~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~-----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~ 535 (873)
+|+||...+......|+|||++.+.+ +.. ...++++.++.++.++.+ ... .|+.+|.+
T Consensus 460 ~Q~~~~~~~~~~~~~~~iPi~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~--p~~~l~r~ 530 (867)
T 2gtq_A 460 KQTVPPTPDMTDKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGV-------TEA--VVPSLLRG 530 (867)
T ss_dssp EEECCCBTTBSCCCCCCEEEEEEEECTTCCBCCEECSSCEESCEEEEECSSEEEEEEBCC-------CSC--CEEEESTT
T ss_pred EEecCCCCCCCCCceEEEEEEEEEEcCCCcccccccccccccceEEEEcCCceEEEEeCC-------CCC--CceEecCC
Confidence 99998655544445899999997643 211 123567777888888742 123 69999999
Q ss_pred ceeEEEEEcCHHHHHHHHHHHHhcCCChhhHHHH---HHHHHHH-----HHcCCC-C-HHHHHHHHHhcc-CCC-cHHHH
Q 002859 536 QTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI---LDDHFAL-----CMARQQ-T-LTSLLTLMASYS-EET-EYTVL 603 (873)
Q Consensus 536 ~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~Ra~l---i~D~~~l-----a~~g~l-~-~~~~l~l~~~l~-~E~-~~~~w 603 (873)
..+++||+|+-..+.. ...+.... ++.+|.+. +.|...+ +++|.. + ++.++++++++. +|. ++.+|
T Consensus 531 fs~~~~l~~~~~~~~l-~~l~~~~~-d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (867)
T 2gtq_A 531 FSAPVHLNYPYSDDDL-LLLLAHDS-DAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLLDNAFK 608 (867)
T ss_dssp CCSSCEEECCCCHHHH-HHHHHHCS-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCHHHH
T ss_pred CCccEEEECCCCHHHH-HHHHhhCC-ChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCCCHHHH
Confidence 9999999977555533 23333222 58888776 8998888 667766 7 889999998865 777 99999
Q ss_pred HHHHH--HHHHHHHHHhccChhH----HHHHHH-HHHHH---HHHHHHHc-----C-CccCCCCCHHHHHHHHHHHHHHH
Q 002859 604 SNLIT--ISYKIGRIAADARPEL----LDYLKQ-FFISL---FQNSAEKL-----G-WDSKPGESHLDALLRGEIFTALA 667 (873)
Q Consensus 604 ~~~~~--~l~~l~~~~~~~~~~~----~~~~~~-~~~~l---~~~~~~~l-----g-~~~~~~~~~~~~~lr~~il~~ac 667 (873)
..++. .+..|...+..-+++. ...++. +...+ +.++|+++ | |+.++ ++...+.||..+|.++|
T Consensus 609 a~~l~lp~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~lr~~~l~~l~ 687 (867)
T 2gtq_A 609 ALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLPKWHELNRQAAKQENQSYEYSP-EAAGWRTLRNVCRAFVL 687 (867)
T ss_dssp HHHTCCCCHHHHTTTCSSBCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCSCCH-HHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCh-HHHHHHHHHHHHHHHHH
Confidence 99998 6777766432212332 233444 54455 88888877 7 88654 77888999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCH
Q 002859 668 LLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDV 747 (873)
Q Consensus 668 ~~~~~~c~~~A~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~~l~aL~cs~d~ 747 (873)
..| ++|++.|+++|.+...+ .+..++.|| +++. +.+.++++.++.++++|+++....+|..++. ||+++|
T Consensus 688 ~~~-~~~~~~a~~~~~~~a~n--mt~~~~al~--~l~~---~~~~~~~~~~~~f~~~~~~~~~~~~k~~~~~--a~~~~~ 757 (867)
T 2gtq_A 688 RAD-PAHIETVAEKYGEMAQN--MTHEWGILS--AVNG---NESDTRNRLLAQFADKFSDDALVMDKYFALV--GSSRRS 757 (867)
T ss_dssp HHC-TTHHHHHHHTHHHHCSS--HHHHHHHHH--HHTT---CCSHHHHHHHHHHHHHTTTCHHHHHHHHHHH--HHCCST
T ss_pred hcC-ccHHHHHHHHHHHhCCC--HhHHHHHHH--HHHh---cCcccHHHHHHHHHHHHcCCchHHHHHHHHH--hcCCCh
Confidence 999 99999999999966432 334566666 3332 2234567789999999999888888888888 688999
Q ss_pred HHHHHHHHHhccC--cC-Ccccceeeee-eccc
Q 002859 748 NIVLEVLNFLLSS--EV-RSQDAVYGLA-VSIE 776 (873)
Q Consensus 748 ~ll~~~L~~~l~~--~i-~~qd~~~~~~-v~~~ 776 (873)
+++++++.++.++ ++ ++++...++. ++.|
T Consensus 758 ~~~~~v~~l~~~~~f~~~npn~~r~l~~~~~~n 790 (867)
T 2gtq_A 758 DTLQQVRTALQHPKFSLENPNKARSLIGSFSRN 790 (867)
T ss_dssp THHHHHHHHTTSTTCCTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhCcCCCcCCchHHHHHHHHHhhC
Confidence 9999999999987 33 4555555555 5433
No 6
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=6.5e-89 Score=814.39 Aligned_cols=701 Identities=20% Similarity=0.250 Sum_probs=506.8
Q ss_pred CCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCCCCccccceeEEEecCCeEEEE
Q 002859 11 PKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVL 90 (873)
Q Consensus 11 p~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~i 90 (873)
|..+...||+|++++++++..++|+++|++...++++.|+||+.+|+|.+|++++. .+.. ...+..+++.++|
T Consensus 11 ~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG~------~l~~-~~~~~~~~~~L~I 83 (889)
T 3ebh_A 11 PSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINNK------KLVE-GEEYTYDNEFLTI 83 (889)
T ss_dssp CCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETTE------ECCB-TTTEEECSSEEEE
T ss_pred CCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECCE------EcCc-ccceEecCCEEEE
Confidence 55688899999999999999999999999887666789999999999999999652 1110 0024445678999
Q ss_pred EeCCccCCceEEEEEEEEeee--CCCCcceEEeeeccCCeeeeeeccCCCcccccccccccCCCCCceEEEEEEEeCCC-
Q 002859 91 EFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSE- 167 (873)
Q Consensus 91 ~l~~~L~~g~~~l~i~y~g~l--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i~i~~p~~- 167 (873)
.++. |+++.++|+|.|+|.. ++.+.|+|++. .+++|||||++||+||||||+|++||+|+++|++|++
T Consensus 84 ~l~~-l~~~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~ 154 (889)
T 3ebh_A 84 FSKF-VPKSKFAFSSEVIIHPETNYALTGLYKSK--------NIIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEK 154 (889)
T ss_dssp CGGG-SCSSSEEEEEEEEECGGGCTTCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTT
T ss_pred ecCC-CCCCcEEEEEEEEecCccCCCceeeEEEC--------CeEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEcccc
Confidence 8765 6546999999999985 45678999874 2788999999999999999999999999999999997
Q ss_pred C-eEEecCCcccee-ecCCeEEEEEecCCCccceEEEEEEeeeeeeeec-----ccc---EEEEEeCCchhhHHHHHHHH
Q 002859 168 L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH-----TSD---VRVYCQVGKANQGKFALNVA 237 (873)
Q Consensus 168 ~-~~~sn~~~~~~~-~~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~-----~~~---i~v~~~~~~~~~~~~~l~~~ 237 (873)
| +++|||+++++. ..+++++++|+.++|||+||+||+||+|+.++.. .+. +++|++|+..+.++++++.+
T Consensus 155 ~~valSNg~l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~ 234 (889)
T 3ebh_A 155 YPVLLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECL 234 (889)
T ss_dssp CCEEEESSEEEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHH
T ss_pred CeEEEccCccccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHH
Confidence 8 579999988764 4677889999999999999999999999988753 221 79999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcCcccc
Q 002859 238 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 317 (873)
Q Consensus 238 ~~~l~~~e~~fg~~yp~~k~d~v~~p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~ 317 (873)
.+++++||++||+|||++|+|+|++|+|+.||||||||++|+|..+|+++..++...++.+..+||||+|||||||+|||
T Consensus 235 ~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~ 314 (889)
T 3ebh_A 235 KKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTL 314 (889)
T ss_dssp HHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEE
T ss_pred HHHHHHHHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeee
Confidence 99999999999999999999999999999999999999999999999999877777888999999999999999999999
Q ss_pred CccchhhhhhhHHHHHHHHHHhhhCcch-hHHHHHHHHHHHHHhhcccCCCCCeeeecCCchhhhhhccceeechhhHHH
Q 002859 318 EWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 396 (873)
Q Consensus 318 ~~w~d~WL~EGfa~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 396 (873)
+||+|+|||||||+|++.++.....+.. .............+..|+...+||+.. .++.+++..|+.++|.||++||
T Consensus 315 ~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~--~~~~ei~~~f~~i~Y~KGa~vL 392 (889)
T 3ebh_A 315 RDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRP--ESYVSMENFYTTTVYDKGSEVM 392 (889)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSC--SEESCGGGCCCHHHHHHHHHHH
T ss_pred cccccceeeHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCC--cchhhhhhhccchhhhHHHHHH
Confidence 9999999999999999988777665432 111111110112466788888999864 2445778899999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhcc-------CCCHHHHHHHhhcCCCcceEEEEEeC----c-
Q 002859 397 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGS-------GEPVNKLMNSWTKQKGYPVISVKVKE----E- 464 (873)
Q Consensus 397 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~-------~~~l~~~~~~W~~~~G~P~v~v~~~~----~- 464 (873)
|||+..||++.|+++|+.|+++|+|++++++|||+++++++ |.|++. |++|++|+|||+|+|+++. +
T Consensus 393 rML~~~lGde~F~~gLr~Yl~~~~~~natt~Df~~ale~as~~~~~~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~~ 471 (889)
T 3ebh_A 393 RMYLTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKKQ 471 (889)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSEECHHHHHHHHHHHHHHHHTCTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTTE
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhccCCCCCCHHH-HHHHhcCCCCceEEEEEeecCCCCE
Confidence 99999999999999999999999999999999999999999 999985 6899999999999999763 2
Q ss_pred -EEEEEEEeeccCCCCCCCeeEEEEEEEEccc---cc---eeeEEeeccceEEEecccccccccCCCCCCceEEeCCCce
Q 002859 465 -KLELEQSQFLSSGSPGDGQWIVPITLCCGSY---DV---CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQT 537 (873)
Q Consensus 465 -~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~~---~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~ 537 (873)
+++|+|+++...+......|.|||++...+. .. ...+.++.+++++.++.+. .. .+..+|.+.+
T Consensus 472 ~~ltl~Q~~~~~~~~~~~~~~~IPl~v~l~~~~~G~~~~~~~~l~l~~~~q~f~~~~~~-------~~--p~~sl~r~fs 542 (889)
T 3ebh_A 472 YSIHVNQYTKPDENQKEKKPLFIPISVGLINPENGKEMISQTTLELTKESDTFVFNNIA-------VK--PIPSLFRGFS 542 (889)
T ss_dssp EEEEEEEECCCCSSCSSCCCCCEEEEEEEECTTTCCBCSCCEEEEECSSEEEEEESCCC-------SC--CEEEESTTCC
T ss_pred EEEEEEEecCCCCCCCCCceEEEEEEEEEEeCCCCccccceeEEEecCCcEEEEEcCCC-------CC--CeEEEcCCCC
Confidence 6889998876655555568999999987432 21 2346778888899997531 22 5778999999
Q ss_pred eEEEEEcC--HHHHHHHHHHHHhcCCChhhHHHHHH--------HHHHHHHcC---------CCCH-HHHHHHHHh-ccC
Q 002859 538 GFYRVKYD--KDLAARLGYAIEMKQLSETDRFGILD--------DHFALCMAR---------QQTL-TSLLTLMAS-YSE 596 (873)
Q Consensus 538 gyyRV~Yd--~~~w~~l~~~l~~~~i~~~~Ra~li~--------D~~~la~~g---------~l~~-~~~l~l~~~-l~~ 596 (873)
+++|++|+ .+.+..|... + -+..+|.+-.. +...-...| .+.. ..+++.++. |..
T Consensus 543 a~v~l~~~~~~~~l~~l~~~---d-~d~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 618 (889)
T 3ebh_A 543 APVYIEDQLTDEERILLLKY---D-SDAFVRYNSCTNIYMKQILMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLED 618 (889)
T ss_dssp SSSEEECCCCHHHHHHHHHH---C-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCCHHHHHHHHHHHTC
T ss_pred ceEEEeCCCCHHHHHHHHhh---C-CChhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCHHHHHHHHHHHcC
Confidence 99999976 4544433332 1 12222321111 000000111 1111 223333332 222
Q ss_pred C-CcHHHHHHHHHH--HHHHHHHHhccChhHHHH--------HHHHHHHHHHHHHHHcC------------CccCCCCCH
Q 002859 597 E-TEYTVLSNLITI--SYKIGRIAADARPELLDY--------LKQFFISLFQNSAEKLG------------WDSKPGESH 653 (873)
Q Consensus 597 E-~~~~~w~~~~~~--l~~l~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~lg------------~~~~~~~~~ 653 (873)
+ .|...-..++.. ...|...+..-+|+.... +..-+...+..+|+++. +.. ..+..
T Consensus 619 ~~~~~~~~a~~l~lp~~~~~~~~~~~~d~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 697 (889)
T 3ebh_A 619 PHADAGFKSYIVSLPQDRYIINFVSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHV-DFDQM 697 (889)
T ss_dssp TTSCHHHHHHHTSCCCHHHHGGGCTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTTTCTTCC-CHHHH
T ss_pred CCCCHHHHHHHhcCCCHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCC-CHHHH
Confidence 1 122222211111 011111110001111111 11111122223333321 111 12334
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHH
Q 002859 654 LDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQE 733 (873)
Q Consensus 654 ~~~~lr~~il~~ac~~~~~~c~~~A~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~e 733 (873)
-.+.||..+|.++|..+.++..+.|.+.|+. + ..-.|-+.+.+++.. ...++..+...++++.....-+
T Consensus 698 ~~r~l~n~~l~~l~~~~~~~~~~~~~~~~~~--------a-nmtd~~~al~~~~~~--~~~~~~l~~f~~~~~~~~lv~d 766 (889)
T 3ebh_A 698 NMRTLRNTLLSLLSKAQYPNILNEIIEHSKS--------P-YPSNWLTSLSVSAYF--DKYFELYDKTYKLSKDDELLLQ 766 (889)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHHHHHHHHTTC--------S-CHHHHHHHHHHGGGS--TTHHHHHHHHHHHHTTSHHHHH
T ss_pred HHHHHHHHHHHHHHhcCChhHHHHHHHHHhh--------c-ChhHHHHHHHHHhcC--hhHHHHHHHHHHHhCCCcchhh
Confidence 5589999999999999988888888777642 1 233444444444332 1123345666667766666667
Q ss_pred HHHHHHHhCCCCC-HHHHHHHHH
Q 002859 734 KTRILSSLASCPD-VNIVLEVLN 755 (873)
Q Consensus 734 k~~~l~aL~cs~d-~~ll~~~L~ 755 (873)
|--.+.|.+...| -+.++++++
T Consensus 767 kwf~~qa~~~~~~~~~~v~~l~~ 789 (889)
T 3ebh_A 767 EWLKTVSRSDRKDIYEILKKLEN 789 (889)
T ss_dssp HHHHHHHTCCCTTHHHHHHHHHH
T ss_pred HhHHHhhCCCCcCHHHHHHHHhc
Confidence 8778888655544 234444444
No 7
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=7.2e-89 Score=820.29 Aligned_cols=704 Identities=20% Similarity=0.252 Sum_probs=527.8
Q ss_pred CCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCCCCccccceeEEEecCC
Q 002859 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEAD 85 (873)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~~~ 85 (873)
.++|+|...+| ||+|++++++...+++|+++|++... +++.|+||+.+|+|.+|++++. ... .++.++
T Consensus 32 ~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~~~-~~~~l~Ld~~~L~I~sV~v~G~---------~l~-~y~~~~ 99 (891)
T 3b34_A 32 HDYRAPDYQIT-DIDLTFDLDAQKTVVTAVSQAVRHGA-SDAPLRLNGEDLKLVSVHINDE---------PWT-AWKEEE 99 (891)
T ss_dssp GGCCCCSEEEE-EEEEEEECCSSCEEEEEEEEEEECSC-TTCCEEEECSSCEEEEEEETTE---------ECC-SEEEET
T ss_pred hhCCCCCceeE-EEEEEEEEECCceEEEEEEEEEEccC-CCCEEEEECCCCEEEEEEEcCE---------Ecc-eEEeeC
Confidence 45777776666 89999999999999999998887655 5788999999999999999642 110 344445
Q ss_pred eEEEEEeCCccCCceEEEEEEEEeee--CCCCcceEEeeeccCCeeeeeeccCCCcccccccccccCCCCCceEEEEEEE
Q 002859 86 EILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLD 163 (873)
Q Consensus 86 ~~l~i~l~~~L~~g~~~l~i~y~g~l--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i~i~ 163 (873)
+.++|. +| |+.++|+|.|++.. ++.+.|+|++. .+++|||||.+||+||||||+|++||+|+|+|+
T Consensus 100 ~~L~I~---~l-p~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~itI~ 167 (891)
T 3b34_A 100 GALVIS---NL-PERFTLKIINEISPAANTALEGLYQSG--------DALCTQCEAEGFRHITYYLDRPDVLARFTTKII 167 (891)
T ss_dssp TEEEEC---SC-CSEEEEEEEEEECGGGCCSCCEEEEET--------TEEEEECTTTTGGGTSSBCCSTTCCEEEEEEEE
T ss_pred CEEEEE---eC-CCeEEEEEEEEEeecccCCCceEEEeC--------CEEEeccccCCCCccccCCCCcccceEEEEEEE
Confidence 678776 34 36899999999864 35578999874 267899999999999999999999999999999
Q ss_pred eCCC-C-eEEecCCcccee-ecCCeEEEEEecCCCccceEEEEEEeeeeeeeec----cc-c--EEEEEeCCchhhHHHH
Q 002859 164 VPSE-L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH----TS-D--VRVYCQVGKANQGKFA 233 (873)
Q Consensus 164 ~p~~-~-~~~sn~~~~~~~-~~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~----~~-~--i~v~~~~~~~~~~~~~ 233 (873)
+|++ | +++|||+++++. ..+++++++|+.++|||+|++||++|+|+.++.. .+ + +++|++|+..+.++++
T Consensus 168 ~p~~~y~~alSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~a 247 (891)
T 3b34_A 168 ADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWA 247 (891)
T ss_dssp EETTTCCEEEESSEEEEEEECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCHHH
T ss_pred eccccceEEEeCCccccceeecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHHHH
Confidence 9997 6 899999988764 3577889999999999999999999999988752 12 1 8999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcC
Q 002859 234 LNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 313 (873)
Q Consensus 234 l~~~~~~l~~~e~~fg~~yp~~k~d~v~~p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn 313 (873)
++.+.+++++||++||+|||++|+++|++|+|..|||||||+++|++..+|+++..++...++.+..+||||+|||||||
T Consensus 248 l~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFGN 327 (891)
T 3b34_A 248 MTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGN 327 (891)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999887777788899999999999999999
Q ss_pred ccccCccchhhhhhhHHHHHHHHHHhhhCcchhHHHHHHH-HHH--HHHhhcccCCCCCeeeecCCchhhhhhccceeec
Q 002859 314 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLD-ECT--EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYR 390 (873)
Q Consensus 314 lVt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~D~~~~~~pi~~~~~~~~~~~~~f~~i~Y~ 390 (873)
+|||+||+|+|||||||+|++..+.....+... .++.. ..+ ..+..|+...+||+.. .++.+++..|+.++|.
T Consensus 328 lVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~--~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~ 403 (891)
T 3b34_A 328 RVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAV--NRINNVRTMRGLQFAEDASPMAHPIRP--DMVIEMNNFYTLTVYE 403 (891)
T ss_dssp TEEESSGGGHHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHTHHHHHTSTTCCCSSC--SEESCGGGGCCHHHHH
T ss_pred CCcccchhhceehHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHhhhhhhccccCCCCcc--ccccccccccccchhh
Confidence 999999999999999999999888877765321 11111 111 2366788888999864 2356678889999999
Q ss_pred hhhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEeC----c--
Q 002859 391 KGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKE----E-- 464 (873)
Q Consensus 391 Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~G~P~v~v~~~~----~-- 464 (873)
||++|||||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|++.| ++|++|+|+|+++|++.. +
T Consensus 404 KGa~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~att~Df~~ale~~sg~dL~~f-~~W~~q~G~P~l~V~~~~~~~~~~~ 482 (891)
T 3b34_A 404 KGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHF-RRWYSQSGTPIVTVKDDYNPETEQY 482 (891)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHCCCCTTT-THHHHCCSCCEEEEEEEEETTTTEE
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHH-HHHHcCCCCceEEEEEEeecCCCEE
Confidence 999999999999999999999999999999999999999999999999999985 799999999999998752 2
Q ss_pred EEEEEEEeeccCCCCCCCeeEEEEEEEEcc--ccc----------eeeEEeeccceEEEecccccccccCCCCCCceEEe
Q 002859 465 KLELEQSQFLSSGSPGDGQWIVPITLCCGS--YDV----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKL 532 (873)
Q Consensus 465 ~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~ 532 (873)
+++|+|+|+...+......|+|||++.+.+ +.. ...++++.++.++.++.+ ... .|+.+
T Consensus 483 ~ltl~Q~~~~~~~~~~~~~~~iPi~v~l~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v-------~~~--P~~~l 553 (891)
T 3b34_A 483 TLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNV-------YFQ--PVPAL 553 (891)
T ss_dssp EEEEEEECCCBTTBSCCCCCCEEEEEEEECTTSCBCCCEETTEECCSEEEECSSEEEEEECCC-------CSC--CEEEE
T ss_pred EEEEEEecCCCCCCCCCceEEEEEEEEEEcCCCCcccccccccccceEEEecCCcEEEEEccC-------CCC--CcEEE
Confidence 589999998654444455899999997743 211 124678888888888742 123 79999
Q ss_pred CCCceeEEEEEcCHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH--------cCC-CC-HHHHHHHHHh-ccCCC-cH
Q 002859 533 NVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCM--------ARQ-QT-LTSLLTLMAS-YSEET-EY 600 (873)
Q Consensus 533 N~~~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~Ra~li~D~~~la~--------~g~-l~-~~~~l~l~~~-l~~E~-~~ 600 (873)
|.+..|||||+||..+|+++... . ..-++.+|.+.+.+++.... .|. +. ...+++.+.. |..+. |.
T Consensus 554 ~~~~s~~~~v~~~~~~~~l~~~l-~-~d~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 631 (891)
T 3b34_A 554 LCEFSAPVKLEYKWSDQQLTFLM-R-HARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDP 631 (891)
T ss_dssp STTCCSSCEEECCCCHHHHHHHH-H-HCSSHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCH
T ss_pred cCCCcceEEEeCCCCHHHHHHHH-h-hCCChhHHHHHHHHHHHHHHHHHHHhhhcCCCcCccHHHHHHHHHHhcCCCcCH
Confidence 99999999999999888877543 2 23467888888888766543 222 12 2445665544 33322 32
Q ss_pred HHHHHHHH--HHHHHHHHHhccChhHHHHHHHHH--------HHHHHHHHHHcCCccC---CCCCHHHHHHHHHHHHHHH
Q 002859 601 TVLSNLIT--ISYKIGRIAADARPELLDYLKQFF--------ISLFQNSAEKLGWDSK---PGESHLDALLRGEIFTALA 667 (873)
Q Consensus 601 ~~w~~~~~--~l~~l~~~~~~~~~~~~~~~~~~~--------~~l~~~~~~~lg~~~~---~~~~~~~~~lr~~il~~ac 667 (873)
..-..++. ....|...+..-+|+.....++++ ...+..+|+++- ... ..+..-.+.||..+|.++|
T Consensus 632 ~~~a~~l~lp~~~~~~~~~~~~d~~~i~~~r~~~~~~la~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~l~n~~l~~l~ 710 (891)
T 3b34_A 632 ALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANY-QSEYRVEHEDIAKRTLRNACLRFLA 710 (891)
T ss_dssp HHHHHHTSCCCHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC-CSSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22221111 122333332222233222223333 333456666653 211 1123345899999999999
Q ss_pred hcCCHHHHHHHHHHHHHHhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCH
Q 002859 668 LLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDV 747 (873)
Q Consensus 668 ~~~~~~c~~~A~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~~l~aL~cs~d~ 747 (873)
..+.++..+.|.+.|+.- + +. .|-..+ +.+++..-....++..+...++++.....-+|--.+.|. +.++
T Consensus 711 ~~~~~~~~~~~~~~~~~a--~-nm----td~~~a-l~~~~~~~~~~~~~~l~~f~~~~~~~~lv~~kwf~~qa~--~~~~ 780 (891)
T 3b34_A 711 FGETHLADVLVSKQFHEA--N-NM----TDALAA-LSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQAT--SPAA 780 (891)
T ss_dssp TSCHHHHHHHHHHHHHHC--S-SH----HHHHHH-HHHHHHTTCTTHHHHHHHHHHHHTTCHHHHHHHHHHHHT--CCCT
T ss_pred hCCCchHHHHHHHHHhhC--C-Ch----HHHHHH-HHHHhccCcchHHHHHHHHHHHhccCcHHHHHHHHHHhC--CCCc
Confidence 988777778888888752 1 11 122222 222222100123455677777777665555666666664 4555
Q ss_pred HHHHHHHHHhccC
Q 002859 748 NIVLEVLNFLLSS 760 (873)
Q Consensus 748 ~ll~~~L~~~l~~ 760 (873)
+.+.++-.+.-.+
T Consensus 781 ~~~~~v~~l~~h~ 793 (891)
T 3b34_A 781 NVLETVRGLLQHR 793 (891)
T ss_dssp THHHHHHHHTTCT
T ss_pred cHHHHHHHHhcCC
Confidence 5777766665444
No 8
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=9.5e-83 Score=748.83 Aligned_cols=527 Identities=18% Similarity=0.282 Sum_probs=418.9
Q ss_pred CCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECC-CCEEEEEeCCceeeEEEEeeccCCCCccccceeEEEec-
Q 002859 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVE- 83 (873)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~- 83 (873)
..+|||..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|.+|++.+..+. ..+..+..+.
T Consensus 18 ~~~~~p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~v~~~~g~----~~~~~~~~~~~ 93 (605)
T 3cia_A 18 YTYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVMAKNSQGQ----WVKVNYDLAKR 93 (605)
T ss_dssp SCCCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEEEEEEEEECTTCC----EEEECEEEEEE
T ss_pred ccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEcCCCC----ccceeEEecCc
Confidence 3479999999999999999999999999999999999886 799999999999999998320010 1123334432
Q ss_pred ---CCeEEEEEeCCccCCceEEEEEEEEeeeCCCCcceEEeee-ccCCeeeeeeccCCCcccccccccccCCCCCceEEE
Q 002859 84 ---ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFK 159 (873)
Q Consensus 84 ---~~~~l~i~l~~~L~~g~~~l~i~y~g~l~~~~~G~y~~~y-~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~ 159 (873)
.++.+.|.++ ++.++|+|.|+|.++. .|++...+ ..+|..+++++|||||++||+||||||+|++||+|+
T Consensus 94 ~~~~~~~l~i~l~----~~~~~l~i~y~~~~~~--~gl~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~katf~ 167 (605)
T 3cia_A 94 DDVLGSKLTINTP----LNAKKVRVYYNSTEKA--TGLQWLSAEQTAGKEKPFLFSQNQAIHARSWIPIQDTPSVRVTYT 167 (605)
T ss_dssp CSSSCEEEEECCC----TTCSEEEEEEEECTTC--TTEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCCTTCCEEEE
T ss_pred cccCCCeEEEEeC----CceEEEEEEEEEecCC--CceEEecccccCCCcccEEEecCcccChhhceecCCCcCceeEEE
Confidence 3567888765 3789999999998754 45654332 235667888999999999999999999999999999
Q ss_pred EEEEeCCCCeEEecCCccceeecCCeEEEEEecCCCccceEEEEEEeeeeeeeeccccEEEEEeCCchhhHHHHHHHHHH
Q 002859 160 ITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDVRVYCQVGKANQGKFALNVAVK 239 (873)
Q Consensus 160 i~i~~p~~~~~~sn~~~~~~~~~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~~~~i~v~~~~~~~~~~~~~l~~~~~ 239 (873)
++|++|++|+|+|||........++ +++|+.++|||+|++||++|+|..++.. ..+++|++|+..+.++++++.+.+
T Consensus 168 i~i~~p~~~~alsng~~~~~~~~~~--~~~f~~t~pmstYl~a~~vg~f~~~~~g-~~~~v~~~p~~~~~~~~~~~~~~~ 244 (605)
T 3cia_A 168 ARITTDKDLLAVMSANNEPGTERDG--DYFFSMPQAIPPYLIAIGVGDLEFKAMS-HQTGIYAESYILDAAVAEFDDTQA 244 (605)
T ss_dssp EEEECCTTCEEEESSEEC----CCS--EEEEEEEEEECGGGCCEEEESCEEEESS-SSEEEEECSTTHHHHHHHSTTHHH
T ss_pred EEEEEcCCcEEEecCCccceecCCC--eEEEeeCCCccceeEEEEEeeeeEecCC-CeEEEEeccChHHHHHHHHHHHHH
Confidence 9999999999998874333322333 6899999999999999999999988742 239999999998899999999999
Q ss_pred HHHHHHHHhCCCCCCCCcceeec-CCCCcccccccccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccccC
Q 002859 240 TLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTME 318 (873)
Q Consensus 240 ~l~~~e~~fg~~yp~~k~d~v~~-p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~ 318 (873)
++++|+++|| |||++|+|+|++ |+|+.|||||||+ +|++..++.++. .++.+||||+|||||||+|||+
T Consensus 245 ~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~gl-tf~~~~ll~~~~--------~~~~viaHElaHqWfGnlVT~~ 314 (605)
T 3cia_A 245 MIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENPRL-SFITPTVVAGDK--------SLVNLIAHELAHSWSGNLVTNE 314 (605)
T ss_dssp HHHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCTTE-EEECGGGCCSSS--------CSTHHHHHHHHHTTBTTTEEES
T ss_pred HHHHHHHHhC-CCCCccccEEEECCccCCCcccCCcE-EEecchhccCcH--------HHHHHHHHHHHHHhhccccccC
Confidence 9999999999 999999999999 5999999999998 566766776543 2457999999999999999999
Q ss_pred ccchhhhhhhHHHHHHHHHHhhhCcchhH--HHHHHHHHH-HHHhhccc-CCCCCeeeecCCchhhhhhccceeechhhH
Q 002859 319 WWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGL-AESHPIEVEVNHTGEIDEIFDAISYRKGAS 394 (873)
Q Consensus 319 ~w~d~WL~EGfa~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~D~~-~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~ 394 (873)
||+|+|||||||+|++++++++.+|++.. ...+....+ ..+ |+. ..+||+..++. ..+++..|+.++|.||++
T Consensus 315 ~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~~pl~~~~~-~~~~~~~f~~i~Y~KGa~ 391 (605)
T 3cia_A 315 SWRDLWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNAEI--LELDASDTQLYIDLK-GRDPDDAFSGVPYVKGQL 391 (605)
T ss_dssp STTSTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HHSCTTTTSSSCCCT-TCCTTTSCCSHHHHHHHH
T ss_pred cchHhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH--HhhccCCCCcccCCC-CCChhHhhCccchhHHHH
Confidence 99999999999999999999999888632 111111111 122 444 67889876654 245677899999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCC----CHHH-HHHHhhcCCCcceEEEEEeCcEEEEE
Q 002859 395 VIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE----PVNK-LMNSWTKQKGYPVISVKVKEEKLELE 469 (873)
Q Consensus 395 vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~----~l~~-~~~~W~~~~G~P~v~v~~~~~~~~l~ 469 (873)
||+||+..||++.|+++|+.|+++|++++++++|||+++++++|. ++.. +|++|++|+|+|+++++.+.+.+.
T Consensus 392 vl~mL~~~lG~e~F~~~lr~yl~~~~~~~~t~~df~~~l~~~~~~~~~~~l~~~~~~~W~~~~G~P~~~~~~~~~~~~-- 469 (605)
T 3cia_A 392 FLMYLEEKFGRERFDAFVLEYFDSHAFQSLGTDNFVKYLKANLTDKYPNIVSDNEINEWIFKAGLPSYAPQPTSNAFK-- 469 (605)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHTTTTTSTTSSCHHHHHHHHHSSSCCSSSCCCCCHHHH--
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhccccccccchhhHHHHhcCCCCCceeccCCchHHH--
Confidence 999999999999999999999999999999999999999999874 5655 799999999999988765432100
Q ss_pred EEeeccCCCCCCCeeEEEEEEEEccccceeeEEeeccceEEEecccccccccCCCCCCceEEeCCCceeEEEEEcCHHHH
Q 002859 470 QSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLA 549 (873)
Q Consensus 470 Q~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w 549 (873)
+ ...-...|+.... ....+.|++|+..+|
T Consensus 470 ~------------------------~~~l~~~w~~~~~---------------------------~~~~~~~~~~~~~~~ 498 (605)
T 3cia_A 470 V------------------------IDKQINQLVTDEL---------------------------TLEQLPTAQWTLHEW 498 (605)
T ss_dssp H------------------------HHHHTCCTTTTSS---------------------------CCSCSGGGGCCSHHH
T ss_pred H------------------------HHHHHHHHHhcCC---------------------------CccccchhhCCHHHH
Confidence 0 0000000111100 001123899999999
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHH
Q 002859 550 ARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGR 615 (873)
Q Consensus 550 ~~l~~~l~~~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~ 615 (873)
..+.+.|.. .|+ .+|+++|||+|+|+.++.. ++.++.++++.++.++.+|..+...|..+.+
T Consensus 499 ~~~l~~l~~-~l~-~~~~~~l~~~~~~~~~~n~--ei~~~~~~~~~~~~~~~~~~~~~~~l~~~gr 560 (605)
T 3cia_A 499 LHFINNLPV-DLD-HQRMVNLDKAFDLTNSSNA--EIAHAWYLLSVRADYKEVYPAMAKYLKSIGR 560 (605)
T ss_dssp HHHHHHSCS-CCT-TC-CHHHHHHHCCSSCSSH--HHHHHHHHHHHHHTCGGGHHHHHHHHHHCCC
T ss_pred HHHHHhcCc-cCC-HHHHHHHHHhhCCCcCCCH--HHHHHHHHHHHhcCChhHHHHHHHHHHHcCC
Confidence 999999976 788 9999999999998877644 6889999999999999999998887766543
No 9
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=6.2e-82 Score=742.32 Aligned_cols=448 Identities=25% Similarity=0.383 Sum_probs=384.8
Q ss_pred CCcCCCCc-eeeEEEEEEEecCCCCeEEEEEEEEEEEECC-CCEEEEEeCCceeeEEEEeeccCCCCcccc-ceeEEEec
Q 002859 7 QPRLPKFA-VPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALE-PTKVELVE 83 (873)
Q Consensus 7 ~~rLp~~v-~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~-~~~~~~~~ 83 (873)
++..|..+ ++.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|++|++++.. ++ ......+.
T Consensus 6 s~a~p~~~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~I~~V~v~g~~------~~~~~~~~~~~ 79 (608)
T 3u9w_A 6 SLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQE------VKYALGERQSY 79 (608)
T ss_dssp CCSCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETTEE------CCEEECCCCGG
T ss_pred cccCcccCCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCEE------cceeccccccc
Confidence 45678776 7999999999999999999999999999887 4899999999999999996521 11 00111233
Q ss_pred CCeEEEEEeCCccCCc-eEEEEEEEEeeeCCCCcceEEeeec-cCCeeeeeeccCCCcccccccccccCCCCCceEEEEE
Q 002859 84 ADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYE-LNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKIT 161 (873)
Q Consensus 84 ~~~~l~i~l~~~L~~g-~~~l~i~y~g~l~~~~~G~y~~~y~-~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i~ 161 (873)
.++.+.|.++.+|.+| .++|+|.|+|+++.. |++...+. .+|..+++++|||||.+||+||||||+|++||+|+++
T Consensus 80 ~~~~l~I~l~~~l~~g~~~~l~I~y~~~~~~~--~~~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~Katf~i~ 157 (608)
T 3u9w_A 80 KGSPMEISLPIALSKNQEIVIEISFETSPKSS--ALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAE 157 (608)
T ss_dssp GCEEEEEEEEEEECTTCEEEEEEEEECCTTCT--TEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCSTTCCEEEEEE
T ss_pred cCceEEEEcCCCCCCCCEEEEEEEEEEEcCCC--ceeeecccccCCCcceEEEEcccCCCCCEEEEecCccceeEEEEEE
Confidence 5678999999999999 999999999987654 45444443 3577788999999999999999999999999999999
Q ss_pred EEeCCCCeEEecCCccceee---cCCeEEEEEecCCCccceEEEEEEeeeeeeeeccccEEEEEeCCchhhHHHHHHHHH
Q 002859 162 LDVPSELVALSNMPVIDEKV---DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDVRVYCQVGKANQGKFALNVAV 238 (873)
Q Consensus 162 i~~p~~~~~~sn~~~~~~~~---~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~~~~i~v~~~~~~~~~~~~~l~~~~ 238 (873)
|++|++++|+|||++.++.. ++++++++|..++|||+||+||+||+|+..+.. ..+++|++|+..+.++++++.+.
T Consensus 158 I~~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~-~~~~v~~~p~~~~~~~~~~~~~~ 236 (608)
T 3u9w_A 158 VSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQIG-PRTLVWSEKEQVEKSAYEFSETE 236 (608)
T ss_dssp EEEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESCEEEEEE-TTEEEEECHHHHHHHHHHTTTHH
T ss_pred eeCCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeeeeeEecC-CceEEEeChhhHHHHHHHHHHHH
Confidence 99999999999998876532 346889999999999999999999999877642 23899999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCcceeec-CCCCcccccccccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcCcccc
Q 002859 239 KTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 317 (873)
Q Consensus 239 ~~l~~~e~~fg~~yp~~k~d~v~~-p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~ 317 (873)
++|++||++|| |||++++++|++ |+|+.||||||||++++++.++.+.. ++.+||||+|||||||+||+
T Consensus 237 ~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~---------~~~viaHElAHqWfGnlVT~ 306 (608)
T 3u9w_A 237 SMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS---------LSNVIAHEISHSWTGNLVTN 306 (608)
T ss_dssp HHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST---------TTHHHHHHHHTTTBTTTEEE
T ss_pred HHHHhHHhcCC-CCCchhhceeeecccccchhhhcCcceeeeeeeecccch---------hHHHHHHHhhhhhhcCcCcc
Confidence 99999999999 999999998887 89999999999999999996655443 45689999999999999999
Q ss_pred CccchhhhhhhHHHHHHHHHHhhhCcchhHHHHHHHHHH-HHHhhcccCCCCCeeeecCCchhh--hhhccceeechhhH
Q 002859 318 EWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEI--DEIFDAISYRKGAS 394 (873)
Q Consensus 318 ~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~pi~~~~~~~~~~--~~~f~~i~Y~Kg~~ 394 (873)
+||+|+|||||||+|++++++++++|++.....+..... .....|+...+||+..++.++.++ +..|+.++|.||++
T Consensus 307 ~~W~d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~i~Y~KGa~ 386 (608)
T 3u9w_A 307 KTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEKGFA 386 (608)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHHHHHHHH
T ss_pred ccccchhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccccCChhhcccHHHHhHHHH
Confidence 999999999999999999999999998766555544333 334567788899998887766554 56899999999999
Q ss_pred HHHHHHHhhC-HHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHH----HHHhhcCCCcceEEEEEeC----cE
Q 002859 395 VIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----MNSWTKQKGYPVISVKVKE----EK 465 (873)
Q Consensus 395 vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~----~~~W~~~~G~P~v~v~~~~----~~ 465 (873)
+||||+..|| ++.|+++||.|+++|+|++++++|||+++++++|.++..+ |++|++|+|||+|+|+++. ..
T Consensus 387 vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~~~~~~~~~W~~~~G~P~v~v~~d~~~~~~~ 466 (608)
T 3u9w_A 387 LLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPNYDMTLTNAC 466 (608)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHHTSCHHHHHHCCSSCSSCCCCCCTTTHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhccccchhhHHHHHHHhcCCCCCceeeeeccccccce
Confidence 9999999998 7889999999999999999999999999999999999888 9999999999999998765 24
Q ss_pred EEEEEEee
Q 002859 466 LELEQSQF 473 (873)
Q Consensus 466 ~~l~Q~rf 473 (873)
++++|+++
T Consensus 467 ~~l~q~~~ 474 (608)
T 3u9w_A 467 IALSQRWI 474 (608)
T ss_dssp HHHHHHHH
T ss_pred eeHHhHHh
Confidence 66677543
No 10
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=2.8e-80 Score=729.65 Aligned_cols=528 Identities=18% Similarity=0.272 Sum_probs=410.9
Q ss_pred CCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECC----CCEEEEEeCCceeeEEEEeeccCCCCccccceeEEEe
Q 002859 7 QPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD----TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELV 82 (873)
Q Consensus 7 ~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~----~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~ 82 (873)
.+|+|..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|.+|++++. ...+..+
T Consensus 21 ~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l~I~~v~v~g~---------~~~~~~~ 91 (632)
T 2xq0_A 21 TLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGS---------KADFQIE 91 (632)
T ss_dssp CCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSEEEEEEEETTE---------ECCEEEC
T ss_pred cccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCCEEEEEEECCe---------ecceEEc
Confidence 479999999999999999999999999999999999877 899999999999999998531 2233333
Q ss_pred c----CCeEEEEEeCCccCCceEEEEEEEEeeeCCCCcceEEee-eccCCeeeeeeccCCCcccccccccccCCCCCceE
Q 002859 83 E----ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSS-YELNGEKKNMAVTQFEPADARRCFPCWDEPACKAT 157 (873)
Q Consensus 83 ~----~~~~l~i~l~~~L~~g~~~l~i~y~g~l~~~~~G~y~~~-y~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~ 157 (873)
. .++.+.|.++++ .+.++|+|.|+|.++.. |++... +..+|. +++++|||||.+||+||||||+|++||+
T Consensus 92 ~~~~~~~~~l~I~l~~~--g~~~~l~I~Y~g~~~~~--gl~~~~~~~~~g~-~~~~~Tq~ep~~AR~~fPc~D~P~~Kat 166 (632)
T 2xq0_A 92 QRKEPLGSRLVINNASC--NDNFTLNIQFRTTDKCT--ALQWLNSKQTKGG-KPYVFSQLEAIHARSLFPCFDTPSVKST 166 (632)
T ss_dssp CCBTTTBCCEEEECCCS--SSEEEEEEEEEECTTCS--SEEEECTTTSTTS-SCEEEECCTTTTGGGTSCBCCSTTCCEE
T ss_pred ccccccCcEEEEEecCC--CCEEEEEEEEeeecCcC--cceeecccccCCC-ceEEEeccccCCcceeeeecCCcccceE
Confidence 2 356789998877 33999999999997654 443322 223455 7888999999999999999999999999
Q ss_pred EEEEEEeCCCCeEEecCCccceeecCCeEEEEEecCCCccceEEEEEEeeeeeeeeccccEEEEEeCCchhhHHHHHH-H
Q 002859 158 FKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDVRVYCQVGKANQGKFALN-V 236 (873)
Q Consensus 158 f~i~i~~p~~~~~~sn~~~~~~~~~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~~~~i~v~~~~~~~~~~~~~l~-~ 236 (873)
|+++|++| ++|++||........++ .+++|+.++|||+|++||+||+|...+.. ..+++|++|+..+.++++++ .
T Consensus 167 f~i~I~~p--~~vv~sg~~~~~~~~~~-~~~~F~~t~pmstYLva~~vg~f~~~~~g-~~~~v~~~p~~~~~~~~~~~~~ 242 (632)
T 2xq0_A 167 FTASIESP--LPVVFSGIRIEDTSKDT-NIYRFEQKVPIPAYLIGIASGDLSSAPIG-PRSTVYTEPFRLKDCQWEFEND 242 (632)
T ss_dssp EEEEEECS--SCEEESSEECCCC-----CEEEEEEEEEECGGGCCEEESSCEEEEEE-TTEEEEECHHHHHHHHHHHTTT
T ss_pred EEEEEEEc--hHHhccCccccceecCC-CeEEEEeCCccchhheeeeEecceeeccC-CeeEEEEccchHHHHHHHHHHH
Confidence 99999999 98886654333221122 27899999999999999999999988742 23999999998888899998 9
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeec-CCCCcccccccccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcCcc
Q 002859 237 AVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLV 315 (873)
Q Consensus 237 ~~~~l~~~e~~fg~~yp~~k~d~v~~-p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlV 315 (873)
+.+++++||++|| |||++|+|+|++ |+|+.|||||||++ |.+..++.++. ..+.+||||+|||||||+|
T Consensus 243 ~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn~glt-~~~~~ll~~~~--------~~~~viaHElAHqWfGnlV 312 (632)
T 2xq0_A 243 VEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESPNMT-FATPTLLAHDR--------SNIDVIAHELAHSWSGNLV 312 (632)
T ss_dssp HHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECCTTCE-EECGGGCCSSS--------CSTHHHHHHHHHTTBTTTE
T ss_pred HHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccccceEE-EeeceeccCch--------hHHHHHHHHHHHHHhcCCC
Confidence 9999999999999 999999999999 59999999999985 55555666543 2467999999999999999
Q ss_pred ccCccchhhhhhhHHHHHHHHHHhhhCcchhH--HHHHHHHHH-HHHhhcccCCCCC---eeeecCCchhhhhhccceee
Q 002859 316 TMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGLAESHP---IEVEVNHTGEIDEIFDAISY 389 (873)
Q Consensus 316 t~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~D~~~~~~p---i~~~~~~~~~~~~~f~~i~Y 389 (873)
|++||+|+|||||||+|++++++++.+|++.. ...+....+ .+ +|+...+|| +..++.++.+++..|+.++|
T Consensus 313 T~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~--l~~~~~~~pl~~l~~~~~~~~~~~~~f~~i~Y 390 (632)
T 2xq0_A 313 TNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNS--IDSMKDPERFSTLVQNLNDNTDPDDAFSTVPY 390 (632)
T ss_dssp EESSGGGTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--HHTCSSHHHHTSSSCCCCSSSCGGGGCSSHHH
T ss_pred ccCCcchhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHhcccCCCCcccccCCCCCCChHHhccchhh
Confidence 99999999999999999999999999998642 211111112 22 255556678 44444434566789999999
Q ss_pred chhhHHHHHHHHhhCH-HHHHHHHHHHHHHhccCCCChHHHHHHHHhccC---CCHHH-HHHHhhcCCCcceEEEEEeCc
Q 002859 390 RKGASVIRMLQNYLGA-ECFQRSLASYIKKYACSNAKTEDLWAALEEGSG---EPVNK-LMNSWTKQKGYPVISVKVKEE 464 (873)
Q Consensus 390 ~Kg~~vl~mL~~~lG~-~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~---~~l~~-~~~~W~~~~G~P~v~v~~~~~ 464 (873)
.||++||+||+..||+ +.|+++|+.|+++|++++++++|||+++++++| .++.. +|++|++|+|+|+ +++.+.+
T Consensus 391 ~KGa~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~G~P~-~~~~~~~ 469 (632)
T 2xq0_A 391 EKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPP-RPHFITA 469 (632)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCCSCCC-CCCCCCH
T ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhhhccccccHHHHHHHhcCCCCCC-CcCCCch
Confidence 9999999999999999 999999999999999999999999999999987 46776 7999999999999 7655431
Q ss_pred E---EEEEEEeeccCCCCCCCeeEEEEEEEEccccceeeEEeeccceEE--EecccccccccCCCCCCceEEeCCCceeE
Q 002859 465 K---LELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSF--DIKELLGCSISKEGDNGGWIKLNVNQTGF 539 (873)
Q Consensus 465 ~---~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~wi~~N~~~~gy 539 (873)
. +...++||....+. ... ..++ .++ .. ++-
T Consensus 470 ~~~~~~~l~~~w~~~~~~--------------~~~----------~~~~~~~~~----------~~--d~~--------- 504 (632)
T 2xq0_A 470 LADNVYQLADKWVEMAQH--------------LKT----------TEDFRSEFN----------AI--DIK--------- 504 (632)
T ss_dssp HHHHHHHHHHHHHHHTTT--------------CCS----------HHHHHHHCC----------GG--GGT---------
T ss_pred HHHHHHHHHHHHHhcccc--------------ccc----------ccccccCCC----------HH--HHh---------
Confidence 1 00111122111000 000 0000 011 01 111
Q ss_pred EEEEcCHHHHHHHHHHHHhc------------CCChhhHHHHHHHHHH--HHHcCCCCHHHHHHHHHhccCCCcHHHHHH
Q 002859 540 YRVKYDKDLAARLGYAIEMK------------QLSETDRFGILDDHFA--LCMARQQTLTSLLTLMASYSEETEYTVLSN 605 (873)
Q Consensus 540 yRV~Yd~~~w~~l~~~l~~~------------~i~~~~Ra~li~D~~~--la~~g~l~~~~~l~l~~~l~~E~~~~~w~~ 605 (873)
+|+...|..+.+.|..+ .|+ .+|+++|||+|. |+.++ +.++.++.++++.++....+|..
T Consensus 505 ---~~~~~~~~~fl~~l~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~~~--n~ei~~~~~~~~~~~~~~~~~~~ 578 (632)
T 2xq0_A 505 ---DFNSNQLVLFLETLTQNGHSNKKPKDFDWAKF-PVASRALLDIYQDNIVKSQ--NAEVVFKMFKFQIFAKLQEEYKH 578 (632)
T ss_dssp ---TCCHHHHHHHHHHHHTTCSSTTSCSCCCGGGC-HHHHHHHHHHTCCCCCTCC--CHHHHHHHHHHHHHTTCGGGHHH
T ss_pred ---hCCHHHHHHHHHHHHhcccccccccccCCCCC-HHHHHHHHHHHhhhhccCc--CHHHHHHHHHHHHhcCChhHHHH
Confidence 78899999999999742 366 899999999998 66554 44889999999988999999999
Q ss_pred HHHHHHHHHHH
Q 002859 606 LITISYKIGRI 616 (873)
Q Consensus 606 ~~~~l~~l~~~ 616 (873)
+...|..+.++
T Consensus 579 ~~~~l~~~gr~ 589 (632)
T 2xq0_A 579 LADWLGTVGRM 589 (632)
T ss_dssp HHHHTTTCCCH
T ss_pred HHHHHHHcCCe
Confidence 88776555443
No 11
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-74 Score=652.43 Aligned_cols=398 Identities=21% Similarity=0.379 Sum_probs=356.9
Q ss_pred CcceEEEEEeCcEEEEEEEeeccCCCC---CCCeeEEEEEEEEccccceeeEEeeccceEEEecccccccccCCCCCCce
Q 002859 453 GYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGW 529 (873)
Q Consensus 453 G~P~v~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~w 529 (873)
|||+|+|++++++++|+|+||+.++.. .+..|+|||+|++++++....+|++.++.++.++. .+ +|
T Consensus 1 GyPvvtV~~~~~~~~l~Q~RFl~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~l~~---------~~--~w 69 (419)
T 3rjo_A 1 GFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV--EW 69 (419)
T ss_dssp CEEEEEEEEETTEEEEEEEEEC----------CCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC--SC
T ss_pred CCCEEEEEECCCEEEEEEeeccCCCCCCCCCCeEEEEEEEEEeCCCCccceEEEecCceEEEcCC---------CC--ce
Confidence 899999999889999999999987643 23589999999987655445678887766776642 34 89
Q ss_pred EEeCCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHH
Q 002859 530 IKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLI 607 (873)
Q Consensus 530 i~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~ 607 (873)
|++|.+++||||||||+++|++|+++|..+ .||+.||+|||||+|+||++|.++|+.+|+|++||++|++|+||.+++
T Consensus 70 i~~N~~~~GyYRVnYd~~~w~~L~~~L~~~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~y~~w~~~~ 149 (419)
T 3rjo_A 70 IKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGL 149 (419)
T ss_dssp EEEEESSSSCCEEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCSHHHHHHHH
T ss_pred EEEeCCccceEEEEeCHHHHHHHHHHHhhCCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 999999999999999999999999999754 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 002859 608 TISYKIGRIAADAR-PELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFL 686 (873)
Q Consensus 608 ~~l~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~~~~~c~~~A~~~f~~~~ 686 (873)
+.|.+|.+++...+ ++.++.|++|+++++.|+++++||++ ++++.++++|..++.+||.+|+++|+++|+++|++|+
T Consensus 150 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lgw~~--~~~~~~~~lR~~~l~~ac~~g~~~c~~~A~~~f~~~~ 227 (419)
T 3rjo_A 150 NELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWK 227 (419)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHcCCCC--CchHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 99999999986432 45789999999999999999999984 5889999999999999999999999999999999999
Q ss_pred cCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCc-CCcc
Q 002859 687 ADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSE-VRSQ 765 (873)
Q Consensus 687 ~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~~l~aL~cs~d~~ll~~~L~~~l~~~-i~~q 765 (873)
+++....||||+|.+|||+++ ++ +++|++||++|+++++++||..+|.||||++||++++++|++++++. ||+|
T Consensus 228 ~~~~~~~i~~dlr~~Vy~~~~---~~--~~~~~~l~~~y~~s~~~~ek~~ll~aL~~s~d~~ll~~~L~~~l~~~~ir~q 302 (419)
T 3rjo_A 228 ESNGNLSLPVDVTLAVFAVGA---QS--TEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQ 302 (419)
T ss_dssp HTTTCSCCCGGGHHHHHHHHT---TS--HHHHHHHHHHHHHCCCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTSSSCGG
T ss_pred hCCCCCCCCCCcceeEEeeee---CC--HHHHHHHHHHHhcCCCHHHHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCchh
Confidence 874444799999999988764 33 88999999999999999999999999999999999999999999886 6999
Q ss_pred cceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCCch-HHHHHHH
Q 002859 766 DAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKPY-IARTLRQ 840 (873)
Q Consensus 766 d~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~l~~~~~Ff~~~~~~~-~~~~~~~ 840 (873)
|...++. ++.| |++++|+|+++||+.|.++|+++ +.++++|..+++.|+|+++++++++||++++.++ ..++++|
T Consensus 303 D~~~~~~~v~~n~~g~~~aw~fl~~nw~~l~~~~~~~~~~~~~~i~~~~~~~~t~~~l~e~~~Ff~~~~~~~~~~~~~~q 382 (419)
T 3rjo_A 303 EFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKENGSQLRCVQQ 382 (419)
T ss_dssp GHHHHHHHHHTSTTTHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHTTTTCCSHHHHHHHHHHHHTTTTC-CCCHHHHH
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhCcCchhHHHHHHHHhhcCCCHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 9999998 8777 99999999999999999999854 7899999999999999999999999999987665 6899999
Q ss_pred HHHHHHHHHHHHHHhcChhHHHHHHHHhhc
Q 002859 841 SIERVQINAKWVESIRNEGHLAEAVKELAY 870 (873)
Q Consensus 841 ~le~i~~ni~W~~~~~~~~~i~~wL~~~~~ 870 (873)
++|+|+.|++|++++.+. |.+||+++.+
T Consensus 383 ale~i~~ni~W~~~~~~~--v~~wL~~~~~ 410 (419)
T 3rjo_A 383 TIETIEENIGWMDKNFDK--IRVWLQSEKL 410 (419)
T ss_dssp HHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHhhH
Confidence 999999999999999999 9999998753
No 12
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.94 E-value=8.2e-27 Score=270.32 Aligned_cols=302 Identities=13% Similarity=0.117 Sum_probs=201.7
Q ss_pred cccccCCCCCceEEEEEEEeCCC---CeEEecCCccceeecCCeEEE---EEecCCCccceEEEEEEeeeeeeeecccc-
Q 002859 145 CFPCWDEPACKATFKITLDVPSE---LVALSNMPVIDEKVDGNMKTV---SYQESPIMSTYLVAVVIGLFDYVEDHTSD- 217 (873)
Q Consensus 145 ~fPc~Dep~~ka~f~i~i~~p~~---~~~~sn~~~~~~~~~~~~~~~---~f~~t~~ms~yl~a~~vg~f~~~~~~~~~- 217 (873)
+|.+.+.- -..+++++|..|++ |.+.+.++....... +..++ .|..-.- | -+.+|+|...+....+
T Consensus 111 ~fly~~g~-~~~p~~~~i~~P~~~~~W~vaT~L~~~~~~~~-~~~~f~a~~yd~LvD-s----Pv~~G~~~~~~~~~~g~ 183 (597)
T 4fgm_A 111 LCLAVEGQ-TDLPCELHLHAPPEAPLWKVATGMPRKSGQPH-SWGCFRADNYDALID-Y----PFLIGDLTIEEFIAHGI 183 (597)
T ss_dssp HCCEETTC-TTSCEEEEECCCTTCTTCEEEESSCBCSSCTT-SSEEEEESSHHHHTT-C----CEEEESCEEEEEEETTE
T ss_pred hheeccCc-cCCcEEEEEECCCCCCcceEEecCCccCCCCC-cceEEEcCCHHHHhc-c----hhcccCcEEEEeccCCe
Confidence 44444332 34678999999999 999998876543211 22222 1221111 1 1467888877765544
Q ss_pred -EEEEEeCCchhhHHHHHHHHHHHHHHHHHHhCCCCCCCCcceeec-CCCCcccccccccc--eeccccccccCCCChhH
Q 002859 218 -VRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLV--TYRETALLYDDQHSAAA 293 (873)
Q Consensus 218 -i~v~~~~~~~~~~~~~l~~~~~~l~~~e~~fg~~yp~~k~d~v~~-p~~~~gamen~gli--~~~e~~ll~~~~~~~~~ 293 (873)
+++..........+.++..+++++++++++|| |||+++++++.. ++...|||||.+.. ++.+..+.......+..
T Consensus 184 p~~l~v~~~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~~~~~~ 262 (597)
T 4fgm_A 184 KHSLVLSGRHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQYEMND 262 (597)
T ss_dssp EEEEEEESSCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTCCSCCH
T ss_pred EEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhccccccccchh
Confidence 44433322333568888899999999999999 999999999864 45588999999864 45655333222222334
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccc-----------CccchhhhhhhHHHHHHHHHHhhhC--cchhHHHHHHHHHHHHHh
Q 002859 294 NKQRVATVVAHELAHQWFGNLVTM-----------EWWTHLWLNEGFATWVSYLAADSLF--PEWKIWTQFLDECTEGLR 360 (873)
Q Consensus 294 ~~~~~~~~iaHElaHqWfGnlVt~-----------~~w~d~WL~EGfa~y~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 360 (873)
.......+++||++||||||.|+| +||+++||+|||++|++.++..+.. ...... ..+......+.
T Consensus 263 ~~~~~~~liaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r~G~~~~~~~~-~~l~~~i~~~~ 341 (597)
T 4fgm_A 263 NYQTFLSLCCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHTSGIIDEKRYL-KLLGDTLSRVE 341 (597)
T ss_dssp HHHHHHHHHHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHHTTSSCHHHHH-HHHHHHHHHHH
T ss_pred hhhchhhhHhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHHcCCCCHHHHH-HHHHHHHHHhh
Confidence 556778899999999999988865 5679999999999999998876542 111111 11122222222
Q ss_pred hcccCCCCCeeeec-------CCchhhhhhccceeechhhHHHHHHHHhhCH-----HHHHHHHHHHHHHhcc--CCCCh
Q 002859 361 LDGLAESHPIEVEV-------NHTGEIDEIFDAISYRKGASVIRMLQNYLGA-----ECFQRSLASYIKKYAC--SNAKT 426 (873)
Q Consensus 361 ~D~~~~~~pi~~~~-------~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~-----~~F~~~l~~yl~~~~~--~~~~~ 426 (873)
.......+|+.... ..+.+....+....|.||++|++||+..|++ +.|+++||.|+++|.+ +++++
T Consensus 342 ~~~gr~~~sl~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~~~~~t~ 421 (597)
T 4fgm_A 342 RGAGQYQQSVTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKTSIGTAD 421 (597)
T ss_dssp HSGGGGTCCHHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTTTCCBCT
T ss_pred cCCCccccChHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcCCCCCCH
Confidence 22222223332110 0111111122234699999999999888865 4799999999999874 58899
Q ss_pred HHHHHHHHhccCCCHHHHHHHhhcCCCcc
Q 002859 427 EDLWAALEEGSGEPVNKLMNSWTKQKGYP 455 (873)
Q Consensus 427 ~df~~~l~~~~~~~l~~~~~~W~~~~G~P 455 (873)
+||.+++++++|.++.+||++|+++++.|
T Consensus 422 ~d~~~~~e~~sG~dl~~ff~~~l~~t~~~ 450 (597)
T 4fgm_A 422 DTVINWLNQYPGIDISDFLKDALYNKESL 450 (597)
T ss_dssp THHHHHHHTSTTCCCHHHHHHHHHSCSCC
T ss_pred HHHHHHHHHhcCcCHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999875
No 13
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=78.85 E-value=3.5 Score=48.37 Aligned_cols=113 Identities=13% Similarity=0.132 Sum_probs=60.7
Q ss_pred EEEEEeC-CchhhHHHHHHHHHHHHHHHHHHhCCCCCC------CCcceeecCCC--------------Ccccccccccc
Q 002859 218 VRVYCQV-GKANQGKFALNVAVKTLELYKEYFAVPYSL------PKLDMIAIPDF--------------AAGAMENYGLV 276 (873)
Q Consensus 218 i~v~~~~-~~~~~~~~~l~~~~~~l~~~e~~fg~~yp~------~k~d~v~~p~~--------------~~gamen~gli 276 (873)
+.|.+.. -..++++.+...++..=..|-+.++...|. .++++++..+- .-|||=-.|..
T Consensus 327 i~I~tqd~lt~~~~~~~~~a~k~~e~~Fh~vl~t~~p~~~~~~~~~L~Vvvf~s~~dY~~~~~lfg~~TdNGG~YleG~~ 406 (785)
T 2y3u_A 327 FIIRAGDKVSEEKIKRLYWASREVKSQFHRVVGNDKALEVGNADDVLTMKIFNSPEEYKFNTNINGVSTDNGGLYIEPRG 406 (785)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHHHHHHHHHCCCSCSSSSCGGGSEEEEEESSHHHHTHHHHHHCCCCSSSCEEEGGGT
T ss_pred EEEEcCCcCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCeEEEEEECCHHHHhhcccccCCcCCCceEEEeCCc
Confidence 6666642 233455555555555556677888866664 36777776431 11232222211
Q ss_pred eeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccccCccc---------hhhhhhhHHHHHHHH
Q 002859 277 TYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWT---------HLWLNEGFATWVSYL 336 (873)
Q Consensus 277 ~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~---------d~WL~EGfa~y~~~~ 336 (873)
.| +-|... .......+...+.||++|.-=|-..-+.-|. -.|+.||||+||+..
T Consensus 407 ~f----~aYe~~--~~~si~nLee~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~~ 469 (785)
T 2y3u_A 407 TF----YTYERT--PQQSIFSLEELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGS 469 (785)
T ss_dssp EE----EEECCC--TTTCSSCHHHHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTTB
T ss_pred eE----EEEecc--CccceEeecccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhcC
Confidence 10 111110 0001112345779999999855444444343 579999999999854
No 14
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=78.58 E-value=10 Score=39.15 Aligned_cols=97 Identities=18% Similarity=0.257 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccc--c--ccceeccccccccCCCChhHHHHHHHHHHHHH
Q 002859 230 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMEN--Y--GLVTYRETALLYDDQHSAAANKQRVATVVAHE 305 (873)
Q Consensus 230 ~~~~l~~~~~~l~~~e~~fg~~yp~~k~d~v~~p~~~~gamen--~--gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHE 305 (873)
+..|.-.+.++.+||.+.|| .-++.- .++....+.. ..+| | ..++|.+-.-.+.|. .-..+++||
T Consensus 73 ~~DAhy~a~~~~d~y~~~~g-r~~id~-~l~~~Vhyg~-~y~NAfWdG~~M~fGDG~~~~~p~--------~~lDVv~HE 141 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFG-TSPLTH-KLYMKVHYGR-SVENAYWDGTAMLFGDGATMFYPL--------VSLDVAAHE 141 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSSS-CEEEEESCTT-TCCCEEECSSCEEECCCCSSBSCS--------CCHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcC-CCCCCC-ceEEEEecCC-CccCcEecCcEEEeeCCCcccccc--------cccceeeec
Confidence 34556678899999999999 556652 3333322211 1222 2 133343321111111 125689999
Q ss_pred HHHHHhcCccccCccchhh-hhhhHHHHHHHHH
Q 002859 306 LAHQWFGNLVTMEWWTHLW-LNEGFATWVSYLA 337 (873)
Q Consensus 306 laHqWfGnlVt~~~w~d~W-L~EGfa~y~~~~~ 337 (873)
++|--......+....+.- |||||+..+...+
T Consensus 142 ~tHGVt~~~agL~y~~eSGaLnEs~SDifG~~v 174 (301)
T 1u4g_A 142 VSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAA 174 (301)
T ss_dssp HHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred cccceeccccCccccCCccchhHHHHHHHHHHH
Confidence 9998887766665555555 8999999998664
No 15
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=78.41 E-value=5 Score=41.40 Aligned_cols=106 Identities=23% Similarity=0.317 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCC--cceeecCCCCc-ccccccccceeccccccccCCCChh-HHHHHHHHHHHHHH
Q 002859 231 KFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAA-GAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHEL 306 (873)
Q Consensus 231 ~~~l~~~~~~l~~~e~~fg~~yp~~k--~d~v~~p~~~~-gamen~gli~~~e~~ll~~~~~~~~-~~~~~~~~~iaHEl 306 (873)
-.|...+.++.+||.+.|| .-++.- ..++..-.+.. ++-.++.-..+..+.+.|....... .....-..+++||+
T Consensus 68 vdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~Vhyg~~~~~~~y~NAfWdg~~m~fGdGdg~~f~~~~~~lDVv~HE~ 146 (301)
T 1bqb_A 68 VDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNNAAWIGDKMIYGDGDGRTFTNLSGANDVVAHEI 146 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTCEEECSSSEEECCCCSSSBSCGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEEeCCCCCCCCccCcEEcCCEEEEEcCCCcccCCcccccceeeeec
Confidence 3566678999999999999 555542 33333222111 1000111112222223332211000 00001246899999
Q ss_pred HHHHhcCccccCccchhh-hhhhHHHHHHHHH
Q 002859 307 AHQWFGNLVTMEWWTHLW-LNEGFATWVSYLA 337 (873)
Q Consensus 307 aHqWfGnlVt~~~w~d~W-L~EGfa~y~~~~~ 337 (873)
+|--......+..-.+.. |||||+..+...+
T Consensus 147 tHGVt~~~agl~y~~eSGaLnEs~SDifg~~~ 178 (301)
T 1bqb_A 147 THGVTQQTANLEYKDQSGALNESFSDVFGYFV 178 (301)
T ss_dssp HHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccceecccCCCcccCCcCchhHHHHHHHhHhh
Confidence 997666554444434444 8999999999763
No 16
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.55 E-value=3.2 Score=35.83 Aligned_cols=70 Identities=21% Similarity=0.255 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCcceeecCCCCccccccc---ccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhc
Q 002859 236 VAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENY---GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 312 (873)
Q Consensus 236 ~~~~~l~~~e~~fg~~yp~~k~d~v~~p~~~~gamen~---gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfG 312 (873)
...++++-+.+..|++. +++-++-.+...+.++..+ +.|.+... ++- ......++.++|||++|-=-+
T Consensus 27 ~L~~~~~~l~~~~~~~~--~~v~v~~~~~~NAf~~g~~~~~~~i~v~~g-Ll~------~l~~~El~aVlaHElgH~~~~ 97 (107)
T 3cqb_A 27 WLLETVGRQAQQAGIGM--PTVAIYDSADINAFATGAKRDDSLVAVSTG-LLH------NMTRDEAEAVLAHEVSHIANG 97 (107)
T ss_dssp HHHHHHHHHHHHHTCCC--CEEEEECCSSEEEEEECCC--CCEEEEEHH-HHH------HSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCC--CeEEEEECCCcCEEEEecCCCCCEEEEcHH-HHh------hCCHHHHHHHHHHHHHHHHCC
Confidence 34556666667778653 3443332222222222211 23444433 221 113457899999999997655
Q ss_pred Cc
Q 002859 313 NL 314 (873)
Q Consensus 313 nl 314 (873)
+.
T Consensus 98 h~ 99 (107)
T 3cqb_A 98 DM 99 (107)
T ss_dssp CE
T ss_pred CH
Confidence 43
No 17
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=71.89 E-value=5.7 Score=41.16 Aligned_cols=102 Identities=19% Similarity=0.131 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCC--CcceeecCCCC---cccccccccceecccc-ccccCCCChhHHHHHHHHHH
Q 002859 229 QGKFALNVAVKTLELYKEYFAVPYSLP--KLDMIAIPDFA---AGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 302 (873)
Q Consensus 229 ~~~~~l~~~~~~l~~~e~~fg~~yp~~--k~d~v~~p~~~---~gamen~gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 302 (873)
.+..|...+.++.+||.+.|| .-++. -+.++..-.+. ..|.=+...++|.+-. ..+.+-. .-..++
T Consensus 69 aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~~-------~slDVv 140 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPLS-------GGIDVV 140 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCTTTCCCEEECSSCEEECCCCSSSBSCGG-------GCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecCCCccCceEcCCEEEEeCCCCccccccc-------ccccce
Confidence 345677788999999999999 55654 13333221221 1233333344444321 1111210 124689
Q ss_pred HHHHHHHHhcCccccCccchh-hhhhhHHHHHHHHHH
Q 002859 303 AHELAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 338 (873)
Q Consensus 303 aHElaHqWfGnlVt~~~w~d~-WL~EGfa~y~~~~~~ 338 (873)
+||+.|--.........-.+. =|||+|+..+...+-
T Consensus 141 ~HE~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve 177 (316)
T 3dnz_A 141 AHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVE 177 (316)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccCCCcccCCccchhHHHHHHHHHHHH
Confidence 999999766554443333333 389999999986654
No 18
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=70.03 E-value=13 Score=46.17 Aligned_cols=195 Identities=14% Similarity=0.105 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHh-cc---CCCcHHHHHHHHHHHHHHHHHHhccCh
Q 002859 547 DLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMAS-YS---EETEYTVLSNLITISYKIGRIAADARP 622 (873)
Q Consensus 547 ~~w~~l~~~l~~~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~-l~---~E~~~~~w~~~~~~l~~l~~~~~~~~~ 622 (873)
.....|.+.+..+.++..+.++++.-+.++. . +-...++.+.- +. ...+..+|.+++-.+..|-+.+....+
T Consensus 356 ~a~~~i~~~i~~~~l~~~ea~~~l~~~~~~~---~-Pt~e~l~~~~~l~~~~~~~~~~~l~~ta~La~gslV~k~c~~~~ 431 (1056)
T 1lsh_A 356 EALLFLKRTLASEQLTSAEATQIVASTLSNQ---Q-ATRESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTV 431 (1056)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHTC---C-CCHHHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhhccC---C-CCHHHHHHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHhccCC
Confidence 3456667777778898888778777444332 2 33334443332 32 235677888888888877665532211
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCC--CCCCCCcchhh
Q 002859 623 ELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADR--TTPLLPPDIRK 700 (873)
Q Consensus 623 ~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~~~~~c~~~A~~~f~~~~~~~--~~~~i~~dlr~ 700 (873)
.+...+...+.+++...+++ + +..-+...|..++..|++..+. .+..++.+. .....|..+|.
T Consensus 432 ~c~~~~v~~i~~~l~~~~~~-------~----~~~~~~~~LkaLGN~g~p~~l~----~l~~~l~~~~~~~~~~~~rvr~ 496 (1056)
T 1lsh_A 432 SCPDELLQPLHDLLSQSSDR-------A----KEEEIVLALKALGNAGQPNSIK----KIQRFLPGQGKSLDEYSTRVQA 496 (1056)
T ss_dssp SCCGGGTHHHHHHHHHHHHT-------T----CHHHHHHHHHHHHHHTCGGGHH----HHHTTSTTSSSCCCCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhc-------C----ChHHHHHHHHHhhccCChhHHH----HHHHhhcCccccccccchHHHH
Confidence 11111111222222222221 1 1233567778888888886554 344455431 11234556664
Q ss_pred hhheeeeeecccCCHHHHHHHHHHHHcCCCH-HHHHHHHH-HhCCCCCHHHHHHHHHHhccC
Q 002859 701 AAYVAVMQKVSASDRSGYESLLRVYRETDLS-QEKTRILS-SLASCPDVNIVLEVLNFLLSS 760 (873)
Q Consensus 701 ~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~-~ek~~~l~-aL~cs~d~~ll~~~L~~~l~~ 760 (873)
+...++.+....-....-+.++..|.+...+ +-|...+. .|-|.++...++++.+.+..+
T Consensus 497 aAi~ALr~~~~~~p~~v~~il~~i~~n~~e~~EvRiaA~~~Lm~t~P~~~~l~~ia~~l~~E 558 (1056)
T 1lsh_A 497 EAIMALRNIAKRDPRKVQEIVLPIFLNVAIKSELRIRSCIVFFESKPSVALVSMVAVRLRRE 558 (1056)
T ss_dssp HHHHTTTTGGGTCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhhhchHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHCcCHHHHHHHHHHHhhC
Confidence 3322222211111123567788888765544 44444333 344668888888887776543
No 19
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=69.42 E-value=6.8 Score=40.37 Aligned_cols=108 Identities=24% Similarity=0.255 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeec---CCCCcccccccccceecccc-ccccCCCChhHHHHHHHHHH
Q 002859 229 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAI---PDFAAGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 302 (873)
Q Consensus 229 ~~~~~l~~~~~~l~~~e~~fg~~yp~~k--~d~v~~---p~~~~gamen~gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 302 (873)
.+..|...+.++.+||.+.|| .-++.- +.++.. ..--..|.=+...++|.+-. ..+.+-. .-..++
T Consensus 62 aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~~-------~slDVv 133 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRYNNAFWNGSQMTYGDGDGSTFIAFS-------GDPDVV 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSCCCEEECSSCEEEECCCSSSBCCGG-------GSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCccCceecCCEEEEeCCCCccccccc-------cccchh
Confidence 345577788999999999999 555532 333322 11111233333344554321 1111210 124689
Q ss_pred HHHHHHHHhcCccccCccchh-hhhhhHHHHHHHHHHhhhCcchhH
Q 002859 303 AHELAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAADSLFPEWKI 347 (873)
Q Consensus 303 aHElaHqWfGnlVt~~~w~d~-WL~EGfa~y~~~~~~~~~~~~~~~ 347 (873)
+||++|--.........-.+. =|||+|+..+...+- .++|.+
T Consensus 134 aHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve---~~dWli 176 (304)
T 4ger_A 134 GHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ---RKNWLV 176 (304)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH---CSSSEE
T ss_pred hhccccccccccCCccccCCccchhHHHHHHHHHHhc---cCCcee
Confidence 999999766554433333333 389999999997765 345543
No 20
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=66.07 E-value=9.5 Score=40.05 Aligned_cols=105 Identities=17% Similarity=0.207 Sum_probs=56.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeecCCCCcccccccccceeccccccccCCCChh-HHHHHHHHHHHHH
Q 002859 229 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHE 305 (873)
Q Consensus 229 ~~~~~l~~~~~~l~~~e~~fg~~yp~~k--~d~v~~p~~~~gamen~gli~~~e~~ll~~~~~~~~-~~~~~~~~~iaHE 305 (873)
.+..+...+.++.+||.+.||. -++.- ..++..-.+.. ..+| ..+..+.+.|....... .....-..+++||
T Consensus 89 av~~ay~~~~~t~d~y~~~~gr-nsid~~G~~l~~~VHyg~-~y~N---AfWdG~~M~fGDG~g~~f~~~~~~lDVv~HE 163 (341)
T 2vqx_A 89 AVDEAYDYLGVTYDFFWQAFKR-NSLDNQGLPLTGSVHYGK-EYQN---AFWNGQQMVFGDGDGEIFNRFTIAIDVVGHA 163 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC-CSTTSSCCCEEEEESCSS-SCCC---EEECSSCEEECCCCSSSBCCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CCCCCCCCeeEEEEecCC-CccC---ceecCcEeEeeCCCCcccCCcccchhhhhhh
Confidence 3455666788999999999993 35432 23333222211 1111 11112223332111000 0000124689999
Q ss_pred HHHHHhcCccccCccchhh-hhhhHHHHHHHHHH
Q 002859 306 LAHQWFGNLVTMEWWTHLW-LNEGFATWVSYLAA 338 (873)
Q Consensus 306 laHqWfGnlVt~~~w~d~W-L~EGfa~y~~~~~~ 338 (873)
++|--......+..-.+.- |||||+..|...+-
T Consensus 164 ltHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve 197 (341)
T 2vqx_A 164 LAHGVTESEAGLIYFQQAGALNESLSDVFGSLVK 197 (341)
T ss_dssp HHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceecccCCccccCCCcchhhHHHHHHHHHHH
Confidence 9997766554444444444 99999999987653
No 21
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=62.41 E-value=61 Score=32.25 Aligned_cols=98 Identities=10% Similarity=0.122 Sum_probs=64.9
Q ss_pred ChhhHHHHHHHHHH-HHHc--C----CCCHHHHHHHH-HhccCCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHH-HHH
Q 002859 562 SETDRFGILDDHFA-LCMA--R----QQTLTSLLTLM-ASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLK-QFF 632 (873)
Q Consensus 562 ~~~~Ra~li~D~~~-la~~--g----~l~~~~~l~l~-~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~-~~~ 632 (873)
.-.+|..-+..+.. ++.. . ..+|..+++.+ +.|.++.+..+-..+++.+..|.+-+.. ..|. .|.
T Consensus 29 ~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~------~~f~~~y~ 102 (249)
T 2qk1_A 29 KWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKT------PGFSKDYV 102 (249)
T ss_dssp SHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCT------TTSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhccc------ccccHHHH
Confidence 35667777777777 6532 1 34677778744 4566899999888999888888765431 2466 889
Q ss_pred HHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhc
Q 002859 633 ISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALL 669 (873)
Q Consensus 633 ~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~ 669 (873)
..++.+++++++= . ...........+..++...
T Consensus 103 ~~llp~ll~~l~d-k---k~~V~~aa~~al~~i~~~~ 135 (249)
T 2qk1_A 103 SLVFTPLLDRTKE-K---KPSVIEAIRKALLTICKYY 135 (249)
T ss_dssp HHHHHHHHHGGGC-C---CHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcC-C---CHHHHHHHHHHHHHHHHHc
Confidence 9999999999972 1 1233344555555555555
No 22
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=60.58 E-value=39 Score=34.73 Aligned_cols=98 Identities=15% Similarity=0.149 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCC---cccccccccceeccccccccCCCChhHHHHHHHHHHHHHH
Q 002859 230 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFA---AGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHEL 306 (873)
Q Consensus 230 ~~~~l~~~~~~l~~~e~~fg~~yp~~k~d~v~~p~~~---~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEl 306 (873)
+..|.-.+.++.+||.+.|| .-|+. ..++..-.+. ..|.=+-..++|.+-.-.+.+. . -..+++||+
T Consensus 74 ~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NAfWdg~~m~fGDG~~~~~~~-~-------slDVv~HE~ 143 (306)
T 3nqx_A 74 LNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFYPL-V-------SLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCEEECSSCEEEECCCSSBSCS-C-------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCccccCCEEEEeCCCcccccc-c-------ccchhhhhh
Confidence 44556678899999999999 55664 2333222111 1233333344554432111111 1 246899999
Q ss_pred HHHHhcCccccCccc-hhhhhhhHHHHHHHHH
Q 002859 307 AHQWFGNLVTMEWWT-HLWLNEGFATWVSYLA 337 (873)
Q Consensus 307 aHqWfGnlVt~~~w~-d~WL~EGfa~y~~~~~ 337 (873)
.|--......+..-. --=|||||+..+...+
T Consensus 144 tHGvt~~~a~l~y~~esGaLnEs~SDifg~~v 175 (306)
T 3nqx_A 144 SHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAA 175 (306)
T ss_dssp HHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCccCCCCCcccchHHHHHHHHH
Confidence 997765543332222 2348999999998654
No 23
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=44.52 E-value=25 Score=35.41 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 002859 295 KQRVATVVAHELAHQWFGN 313 (873)
Q Consensus 295 ~~~~~~~iaHElaHqWfGn 313 (873)
...++.+||||++|-=-++
T Consensus 97 ~~ELaaVLaHElgH~~~~H 115 (253)
T 3c37_A 97 ETELAGVLAHEINHAVARH 115 (253)
T ss_dssp HHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHCcC
Confidence 4579999999999976544
No 24
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=38.78 E-value=10 Score=33.80 Aligned_cols=45 Identities=18% Similarity=0.156 Sum_probs=26.2
Q ss_pred cceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccccCccch
Q 002859 275 LVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTH 322 (873)
Q Consensus 275 li~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~d 322 (873)
+++||...+-+-. +.......+..++.||+||.. |.|...+.|+|
T Consensus 68 I~lYR~pi~~~~~--~~eeL~~~V~~tvvHEiaHhf-e~lag~~glsd 112 (130)
T 2ejq_A 68 IALYYGSFLEVAG--EGFDWEAEVWETMLHELRHHL-ESLAGRDDLVQ 112 (130)
T ss_dssp EEEEHHHHHHHCC--TTCCHHHHHHHHHHHHHHHHH-HHHHTTC----
T ss_pred EEEehHHHHHHhC--ChhhHHHHHHHHHHHHhHHHH-HhhcccCCCCH
Confidence 5666666332222 233456678999999999985 55555555443
No 25
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=34.56 E-value=2.3e+02 Score=24.61 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=20.3
Q ss_pred EEEEEeCCccCCceEEEEEEEEeeeCC
Q 002859 87 ILVLEFAETLPTGMGVLAIGFEGVLND 113 (873)
Q Consensus 87 ~l~i~l~~~L~~g~~~l~i~y~g~l~~ 113 (873)
.....++.++.||.|+|+..+.|+...
T Consensus 81 ~f~~~w~~~~~pG~Ytl~a~l~~~~~~ 107 (120)
T 3isy_A 81 DFSDVWKEVPEPGTYEVKVTFKGRAEN 107 (120)
T ss_dssp EEEEEESSCCCSEEEEEEEEECCEETT
T ss_pred EEEEEeCCCCCCccEEEEEEEEeeecc
Confidence 344566677888999999999987643
No 26
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=32.76 E-value=36 Score=33.14 Aligned_cols=14 Identities=36% Similarity=0.584 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHH
Q 002859 297 RVATVVAHELAHQW 310 (873)
Q Consensus 297 ~~~~~iaHElaHqW 310 (873)
..+.++||||+|.+
T Consensus 135 ~~a~~~AHElGHnl 148 (214)
T 1r55_A 135 GAAATMAHEIGHSL 148 (214)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 46889999999986
No 27
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=30.61 E-value=53 Score=31.52 Aligned_cols=14 Identities=50% Similarity=0.698 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002859 297 RVATVVAHELAHQW 310 (873)
Q Consensus 297 ~~~~~iaHElaHqW 310 (873)
..+.++||||+|+.
T Consensus 134 ~~a~~~AHElGH~l 147 (202)
T 1yp1_A 134 LMAVVMAHELGHNL 147 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 36889999999995
No 28
>2e19_A Transcription factor 8; homeobox domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.60 E-value=70 Score=24.27 Aligned_cols=49 Identities=2% Similarity=0.106 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhhccC
Q 002859 814 ASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRK 872 (873)
Q Consensus 814 ~t~~~l~~~~~Ff~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wL~~~~~~~ 872 (873)
-+++++..++..|..++.+.... .+.+...+.+-+ ..|.-|++++..|.
T Consensus 10 p~~~Ql~~Le~~F~~~~yp~~~~-----r~~LA~~l~L~e-----~qVqvWFqNRRak~ 58 (64)
T 2e19_A 10 PLKNLLSLLKAYYALNAQPSAEE-----LSKIADSVNLPL-----DVVKKWFEKMQAGQ 58 (64)
T ss_dssp CCHHHHHHHHHHHTTCSSCCHHH-----HHHHHHHHTCCH-----HHHHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHhcCCCcCHHH-----HHHHHHHhCcCh-----hhcCcchhcccCCC
Confidence 35889999999998876654332 112222233323 33889998775553
No 29
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=29.04 E-value=65 Score=30.90 Aligned_cols=14 Identities=50% Similarity=0.674 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHH
Q 002859 297 RVATVVAHELAHQW 310 (873)
Q Consensus 297 ~~~~~iaHElaHqW 310 (873)
..+.++||||+|..
T Consensus 135 ~~a~~~AHElGH~l 148 (202)
T 2w15_A 135 WVAVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 46889999999995
No 30
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=28.82 E-value=64 Score=30.80 Aligned_cols=14 Identities=50% Similarity=0.667 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHH
Q 002859 297 RVATVVAHELAHQW 310 (873)
Q Consensus 297 ~~~~~iaHElaHqW 310 (873)
..+.++||||+|++
T Consensus 132 ~~a~~~AHElGH~l 145 (197)
T 1bud_A 132 LVAITLAHEMAHNL 145 (197)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 36889999999996
No 31
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=27.88 E-value=1.7e+02 Score=24.66 Aligned_cols=57 Identities=19% Similarity=0.275 Sum_probs=30.0
Q ss_pred CCEEEEEeCC-ce--eeEEEEeeccCCCCccccc-------eeEEEec-CCeEEEEEeCCccCCceEEEEEE
Q 002859 46 TKFIVLNAAD-LT--INNRSVSFTNKVSSKALEP-------TKVELVE-ADEILVLEFAETLPTGMGVLAIG 106 (873)
Q Consensus 46 ~~~i~L~~~~-l~--i~~v~i~~~~~~~~~~~~~-------~~~~~~~-~~~~l~i~l~~~L~~g~~~l~i~ 106 (873)
...|.|...+ ++ +..+.+.+.++. .+.. .....+. ....+.+.++ +|.+|.|++.-.
T Consensus 19 P~~V~L~Fse~v~~~~s~v~v~~~~g~---~v~~~~~~~~~~~~~~~~~~~~~~~~~l~-~L~~G~YtV~Wr 86 (104)
T 1lyq_A 19 PEKIQLNFSENLTVKFSGAKLTMTGMK---GMSSHSPMPVAAKVAPGADPKSMVIIPRE-PLPAGTYRVDWR 86 (104)
T ss_dssp CCCEEEEESSCCCGGGCEEEEEEEEEC------CCCCEECCEEEEECSSTTEEEEEESS-CCCSEEEEEEEE
T ss_pred CCEEEEEeCCCCcccccEEEEECCCCC---eeeeccccccccceeecCCCCcEEEEECC-CCCCceEEEEEE
Confidence 4556666542 32 566666543221 1111 3333443 3456777776 899998876533
No 32
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=27.65 E-value=1.8e+02 Score=24.33 Aligned_cols=58 Identities=14% Similarity=0.136 Sum_probs=30.4
Q ss_pred CCCEEEEEeCC-c--eeeEEEEeeccCCCCccccc------eeEEEec-CCeEEEEEeCCccCCceEEEEEE
Q 002859 45 DTKFIVLNAAD-L--TINNRSVSFTNKVSSKALEP------TKVELVE-ADEILVLEFAETLPTGMGVLAIG 106 (873)
Q Consensus 45 ~~~~i~L~~~~-l--~i~~v~i~~~~~~~~~~~~~------~~~~~~~-~~~~l~i~l~~~L~~g~~~l~i~ 106 (873)
....|.|...+ + .+..+.+.+.++ ..+.. .....+. ....+.+.++ +|.+|.|++.-.
T Consensus 17 aP~~v~L~Fse~v~~~~s~v~v~~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~l~-~L~~G~YtV~Wr 84 (102)
T 2c9r_A 17 APAKIELHFSENLVTQFSGAKLVMTAM---PGMEHSPMAVKAAVSGGGDPKTMVITPAS-PLTAGTYKVDWR 84 (102)
T ss_dssp CCSCEEEEESSCCCGGGCEEEEEEEEC---C-----CEEECEEEEECSSTTEEEEEESS-CCCSEEEEEEEE
T ss_pred CCCEEEEEeCCCCccCccEEEEECCCC---CeeeeccccccccceecCCCCcEEEEECC-CCCCceEEEEEE
Confidence 34556666542 3 456666655322 11222 3333442 3456777775 899998876533
No 33
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=25.70 E-value=3.4e+02 Score=24.97 Aligned_cols=89 Identities=20% Similarity=0.201 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHH
Q 002859 656 ALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKT 735 (873)
Q Consensus 656 ~~lr~~il~~ac~~~~~~c~~~A~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~ 735 (873)
...|...+..++..|.++++....+. +.+ -++..|.....++. +.|+......|.+.. +..++..|.
T Consensus 28 ~~vr~~A~~~L~~~~~~~~~~~L~~~----l~~-----~~~~vr~~a~~~L~---~~~~~~~~~~L~~~l-~d~~~~vr~ 94 (201)
T 3ltj_A 28 YYVRRAAAYALGKIGDERAVEPLIKA----LKD-----EDAWVRRAAADALG---QIGDERAVEPLIKAL-KDEDGWVRQ 94 (201)
T ss_dssp HHHHHHHHHHHHHHCCGGGHHHHHHH----TTC-----SSHHHHHHHHHHHH---HHCCGGGHHHHHHHT-TCSSHHHHH
T ss_pred HHHHHHHHHHHHhcCChhHHHHHHHH----HcC-----CCHHHHHHHHHHHH---hhCCHHHHHHHHHHH-cCCCHHHHH
Confidence 45677777777888876665554433 222 24667764443332 245666677777755 446778888
Q ss_pred HHHHHhCCCCCHHHHHHHHHHh
Q 002859 736 RILSSLASCPDVNIVLEVLNFL 757 (873)
Q Consensus 736 ~~l~aL~cs~d~~ll~~~L~~~ 757 (873)
..+.+|+...++..+..++..+
T Consensus 95 ~a~~aL~~~~~~~~~~~L~~~l 116 (201)
T 3ltj_A 95 SAAVALGQIGDERAVEPLIKAL 116 (201)
T ss_dssp HHHHHHHHHCCGGGHHHHHHHT
T ss_pred HHHHHHHHhCcHHHHHHHHHHH
Confidence 8999998888887777766654
No 34
>3s51_A Protein FACI, fanconi anemia group I protein homolog; DNA repair, DNA binding protein; 3.30A {Mus musculus} PDB: 3s4z_A* 3s4w_A
Probab=24.92 E-value=1.3e+02 Score=37.38 Aligned_cols=136 Identities=10% Similarity=-0.008 Sum_probs=82.6
Q ss_pred CHHHHHHHHHHHHhcC-CC----hhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHhc
Q 002859 545 DKDLAARLGYAIEMKQ-LS----ETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAAD 619 (873)
Q Consensus 545 d~~~w~~l~~~l~~~~-i~----~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~ 619 (873)
+...|..|.+.+-.+. .+ ..-|.++..-...+...|.++...+.+++..|-.|-+..|=.......+...+.++.
T Consensus 39 ~~~~~~~ll~~i~~~~~~s~~~~~~~r~~v~~~~~~~l~~~~l~~~~~~dii~~L~~el~~lp~~~Lv~l~~~~v~~ir~ 118 (1308)
T 3s51_A 39 KGRAVGTLLRAVLKGSPCSEEDGALRRYKIYSCCIQLVESGDLQQDVASEIIGLLMLEVHHFPGPLLVDLASDFVGAVRE 118 (1308)
T ss_dssp CHHHHHTHHHHHHTTSCSSSHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHS
T ss_pred CCccHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHc
Confidence 3445777777665432 22 234788888999999999999999999999999988877766666666665555543
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHcCCc----cCCCCCHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHH
Q 002859 620 ARPELLDYLKQFFISLFQNSAEKLGWD----SKPGESHLDALLRGEIFTALALLG-HKETLNEASKRFHAF 685 (873)
Q Consensus 620 ~~~~~~~~~~~~~~~l~~~~~~~lg~~----~~~~~~~~~~~lr~~il~~ac~~~-~~~c~~~A~~~f~~~ 685 (873)
.++.. ..+. +|+...+..|.-. ...+..-.-...+..+++-.|... ++.|+-....+|++.
T Consensus 119 g~~~~-~~wl----dLLP~~Ls~L~~~~~~i~~g~~e~sG~Eyk~~iI~~Lcs~~W~~~~li~l~~mFrDv 184 (1308)
T 3s51_A 119 DRLVN-GKSL----ELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQLTSVFKDV 184 (1308)
T ss_dssp CCCSC-STTT----THHHHHHHHHHTCCSCCSSSSCCCCHHHHHHHHHHHHHHSCCCTTTHHHHHHHGGGS
T ss_pred CCccc-CcHH----HHHHHHHHHHHcccchhhcCCCccchHHHHHHHHHHHHhcCCcHHHHHHHHHHHHcC
Confidence 22221 2222 2333333333211 111112234677888888888865 334555555555543
No 35
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=24.00 E-value=53 Score=36.36 Aligned_cols=21 Identities=33% Similarity=0.550 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCc
Q 002859 294 NKQRVATVVAHELAHQWFGNL 314 (873)
Q Consensus 294 ~~~~~~~~iaHElaHqWfGnl 314 (873)
..+.+..++|||++|-=-++.
T Consensus 325 ~~~El~aVlaHElgH~~~~~~ 345 (482)
T 4aw6_A 325 KNEEVLAVLGHELGHWKLGHT 345 (482)
T ss_dssp CHHHHHHHHHHHHHHHHTTHH
T ss_pred CHHHHHHHHHHHHHHHHcccH
Confidence 456799999999999876643
No 36
>3iuk_A Uncharacterized protein; PF05960.1, DUF885, M32 carboxypeptidase-like fold, PSI, MCSG structural genomics, protein structure initiative; 1.85A {Arthrobacter aurescens}
Probab=23.81 E-value=3.2e+02 Score=30.75 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=31.7
Q ss_pred hCHHHHHHHHHHHHHH------hccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcce
Q 002859 403 LGAECFQRSLASYIKK------YACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPV 456 (873)
Q Consensus 403 lG~~~F~~~l~~yl~~------~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~G~P~ 456 (873)
+.++.-..-+.+|+.. |..+.....++.+..++..|.+++.|-+.-+.....|+
T Consensus 495 ~~~~~a~~ev~Ry~~~Pgqa~sY~~G~~~i~~lR~~a~~~lGfdlk~FHd~vL~~G~~Pl 554 (562)
T 3iuk_A 495 ISEGQLQFEFTRYLGWPGQAPSYKVGQRLWEQIRAELESREGFDLKSFHSKALNIGSVGL 554 (562)
T ss_dssp CCHHHHHHHHHHHHHSTTSTTHHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHTTCSCCH
T ss_pred CChHHHHHHHHHHHcCCcHHhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCH
Confidence 4455555667777641 22222234456666666667889888666666666664
No 37
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=23.29 E-value=56 Score=31.19 Aligned_cols=14 Identities=43% Similarity=0.617 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002859 297 RVATVVAHELAHQW 310 (873)
Q Consensus 297 ~~~~~iaHElaHqW 310 (873)
..+.++||||+|+.
T Consensus 134 ~~a~~~AHElGH~l 147 (197)
T 1qua_A 134 LMAVTMAHELGHNL 147 (197)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 36889999999995
No 38
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=23.14 E-value=55 Score=31.42 Aligned_cols=14 Identities=36% Similarity=0.572 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002859 297 RVATVVAHELAHQW 310 (873)
Q Consensus 297 ~~~~~iaHElaHqW 310 (873)
..+.++||||+|.+
T Consensus 135 ~~a~~~AHElGHnl 148 (202)
T 1atl_A 135 LMGVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred eeEEEehhhhcccc
Confidence 36789999999995
No 39
>2ecc_A Homeobox and leucine zipper protein homez; homeobox domain, transcription factor, leucine zipper- containing factor, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=22.46 E-value=1.5e+02 Score=23.53 Aligned_cols=21 Identities=14% Similarity=0.096 Sum_probs=17.5
Q ss_pred CCHHHHHHHHHHhhcCCCchH
Q 002859 814 ASYEKVREVEEFFSSRCKPYI 834 (873)
Q Consensus 814 ~t~~~l~~~~~Ff~~~~~~~~ 834 (873)
-|.+++..|++.|..++-|+.
T Consensus 10 fT~~Ql~~Le~~F~~~~YPs~ 30 (76)
T 2ecc_A 10 KTKEQLAILKSFFLQCQWARR 30 (76)
T ss_dssp CCHHHHHHHHHHHHHCSSCCH
T ss_pred CCHHHHHHHHHHHHHCCCCCH
Confidence 479999999999998876643
No 40
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=22.03 E-value=96 Score=33.74 Aligned_cols=14 Identities=43% Similarity=0.620 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHH
Q 002859 297 RVATVVAHELAHQW 310 (873)
Q Consensus 297 ~~~~~iaHElaHqW 310 (873)
.++.++||||+|++
T Consensus 145 ~~a~t~AHElGHnl 158 (427)
T 2ero_A 145 LVAIAMAHEMGHNL 158 (427)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 56889999999997
No 41
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=20.60 E-value=60 Score=31.18 Aligned_cols=14 Identities=43% Similarity=0.629 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHH
Q 002859 297 RVATVVAHELAHQW 310 (873)
Q Consensus 297 ~~~~~iaHElaHqW 310 (873)
..+.++||||+|..
T Consensus 137 ~~a~~~AHElGH~l 150 (203)
T 1kuf_A 137 MVAVTMTHELGHNL 150 (203)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhhhhc
Confidence 47889999999995
No 42
>3a03_A T-cell leukemia homeobox protein 2; homeodomain, developmental protein, DNA-binding, N gene regulation; 1.54A {Homo sapiens}
Probab=20.43 E-value=2.2e+02 Score=20.55 Aligned_cols=46 Identities=13% Similarity=0.047 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 002859 814 ASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELA 869 (873)
Q Consensus 814 ~t~~~l~~~~~Ff~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wL~~~~ 869 (873)
-|.+++..++..|..++.++...- +.+...+.+ .+..|..|+++..
T Consensus 4 ft~~Ql~~Le~~F~~~~yp~~~~r-----~~LA~~l~l-----~~~qV~~WFqNRR 49 (56)
T 3a03_A 4 FSRSQVLELERRFLRQKYLASAER-----AALAKALRM-----TDAQVKTWFQNRR 49 (56)
T ss_dssp CCHHHHHHHHHHHHHCSSCCHHHH-----HHHHHHHTC-----CHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCcCHHHH-----HHHHHHhCc-----CHHHhhHhhHHhh
Confidence 378999999999998776643221 112222222 3334888987653
No 43
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=20.38 E-value=59 Score=28.11 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=23.5
Q ss_pred ccceeccccccccCCCChhHHHHHHHHHHHHHHHHHH
Q 002859 274 GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 310 (873)
Q Consensus 274 gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 310 (873)
-+++||..- +-- -.+.......+..++.||+||..
T Consensus 68 rI~lYR~Pi-~~~-~~~~~el~~~V~~vvvhEiahh~ 102 (114)
T 3e11_A 68 RIIIYRNTI-CAL-CETESEVIDEVRKTVVHEIAHHF 102 (114)
T ss_dssp EEEEEHHHH-HHT-CSSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEehHHH-HHH-hCChhHHHHHHHHHHHHHHHHHc
Confidence 367777762 222 23444556778899999999985
No 44
>3a02_A Homeobox protein aristaless; homeodomain, developmental protein, DNA-binding, N gene regulation; 1.00A {Drosophila melanogaster} PDB: 3lnq_A 3cmy_A
Probab=20.21 E-value=2.1e+02 Score=20.91 Aligned_cols=45 Identities=16% Similarity=0.183 Sum_probs=28.0
Q ss_pred CCHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHh
Q 002859 814 ASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKEL 868 (873)
Q Consensus 814 ~t~~~l~~~~~Ff~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wL~~~ 868 (873)
-|.+++..++..|..++.++...- +.+...+.+ .+..|..|+++.
T Consensus 6 ft~~Q~~~Le~~F~~~~yp~~~~r-----~~La~~l~l-----~~~qV~~WFqNr 50 (60)
T 3a02_A 6 FTSFQLEELEKAFSRTHYPDVFTR-----EELAMKIGL-----TEARIQVWFQNR 50 (60)
T ss_dssp CCHHHHHHHHHHHHHCSSCCHHHH-----HHHHHHHTS-----CHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCcCHHHH-----HHHHHHHCc-----CHHHHHHHhhhh
Confidence 478999999999998776643221 112222222 333488999765
No 45
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=20.11 E-value=6e+02 Score=24.73 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHH
Q 002859 656 ALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKT 735 (873)
Q Consensus 656 ~~lr~~il~~ac~~~~~~c~~~A~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~ 735 (873)
...|...+..++..|.+..+.... ..+.+ -+++.|..+-.++.. +...+......|.+... ..++.-|.
T Consensus 142 ~~vR~~a~~aL~~~~~~~~~~~L~----~~l~d-----~~~~vr~~a~~aL~~-~~~~~~~~~~~L~~~l~-d~~~~vR~ 210 (280)
T 1oyz_A 142 TNVRRATAFAISVINDKATIPLLI----NLLKD-----PNGDVRNWAAFAINI-NKYDNSDIRDCFVEMLQ-DKNEEVRI 210 (280)
T ss_dssp HHHHHHHHHHHHTC---CCHHHHH----HHHTC-----SSHHHHHHHHHHHHH-HTCCCHHHHHHHHHHTT-CSCHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHH----HHHcC-----CCHHHHHHHHHHHHh-hccCcHHHHHHHHHHhc-CCCHHHHH
Confidence 466777778888888765444333 33333 235677644333322 21235666777776654 45677888
Q ss_pred HHHHHhCCCCCHHHHHHHHHHhcc
Q 002859 736 RILSSLASCPDVNIVLEVLNFLLS 759 (873)
Q Consensus 736 ~~l~aL~cs~d~~ll~~~L~~~l~ 759 (873)
..+.+|+...++..+..++..+-+
T Consensus 211 ~A~~aL~~~~~~~~~~~L~~~l~d 234 (280)
T 1oyz_A 211 EAIIGLSYRKDKRVLSVLCDELKK 234 (280)
T ss_dssp HHHHHHHHTTCGGGHHHHHHHHTS
T ss_pred HHHHHHHHhCCHhhHHHHHHHhcC
Confidence 888888888888877777776544
Done!