BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002861
(873 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LNJ9|FKGP_ARATH Bifunctional fucokinase/fucose pyrophosphorylase OS=Arabidopsis
thaliana GN=FKGP PE=1 SV=2
Length = 1055
Score = 1344 bits (3478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/872 (74%), Positives = 744/872 (85%), Gaps = 11/872 (1%)
Query: 1 MTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLL 60
MTGDVLPCFDA M LPEDA+ I+TVPITLDIASNHGVIV +K L E+Y +SLV+DLL
Sbjct: 190 MTGDVLPCFDAFKMTLPEDAASIVTVPITLDIASNHGVIVTSKSESLAESYTVSLVNDLL 249
Query: 61 QKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSL 120
QKP V++L K AIL DGR LLDTGII+ RG+AW +LV L CSC PM+ EL+ S KEMSL
Sbjct: 250 QKPTVEDLVKKDAILHDGRTLLDTGIISARGRAWSDLVALGCSCQPMILELIGSKKEMSL 309
Query: 121 YEDLVAAWVPAKHDWLMLRPLGKELVSKLGKQRMFSYCAYELLFLHFGTSSEVLDHLSGD 180
YEDLVAAWVP++HDWL RPLG+ LV+ LG+Q+M+SYC Y+L FLHFGTSSEVLDHLSGD
Sbjct: 310 YEDLVAAWVPSRHDWLRTRPLGELLVNSLGRQKMYSYCTYDLQFLHFGTSSEVLDHLSGD 369
Query: 181 VSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSI 240
SG+VGRRHLCSIPATTVSDIAAS+V+LSS+IA GVSIGEDSLIYDS +S +QIGS SI
Sbjct: 370 ASGIVGRRHLCSIPATTVSDIAASSVILSSEIAPGVSIGEDSLIYDSTVSGAVQIGSQSI 429
Query: 241 VVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVYCGLHDNPKNSLTKDGTF 300
VVG + P E T E SFRFMLPDRHCLWEVPLVG RV+VYCGLHDNPKNS+ KDGTF
Sbjct: 430 VVGIHIPSEDLGTPE-SFRFMLPDRHCLWEVPLVGHKGRVIVYCGLHDNPKNSIHKDGTF 488
Query: 301 CGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYSEMLTLATWLMGLSDHKTG 360
CGKP +KV DLGI+ESDLWSS +Q++CLWNAK+FPIL+YSEML LA+WLMGL D +
Sbjct: 489 CGKPLEKVLFDLGIEESDLWSSYVAQDRCLWNAKLFPILTYSEMLKLASWLMGLDDSRNK 548
Query: 361 FLLPLWKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIAKACINYGMLGRNLSQLCE 420
+ LW++S+RVSLEELH SI+F EMC GSSNHQADLA GIAKAC+NYGMLGRNLSQLC
Sbjct: 549 EKIKLWRSSQRVSLEELHGSINFPEMCNGSSNHQADLAGGIAKACMNYGMLGRNLSQLCH 608
Query: 421 EILQKELSGVDICKDILDLCPRLQDQNSKILPKSRAYQAQVDLLRACKEETTASELEHKV 480
EILQKE G++ICK+ LD CP+ Q+QNSKILPKSRAYQ +VDLLRAC +E A ELEHKV
Sbjct: 609 EILQKESLGLEICKNFLDQCPKFQEQNSKILPKSRAYQVEVDLLRACGDEAKAIELEHKV 668
Query: 481 WAAVADETASAIKYGFREYLLEPLSRGSSAYQNKNDDGFVDHP---FQPRTVKVELPVRI 537
W AVA+ETASA++YGFRE+LLE S G S +N + HP FQPR KVELPVR+
Sbjct: 669 WGAVAEETASAVRYGFREHLLE--SSGKSHSENH-----ISHPDRVFQPRRTKVELPVRV 721
Query: 538 DFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDL 597
DF GGWSDTPPWSLERAG VLN+AI+LE SLPIGTIIETT G+ I DDAGN+LHIED
Sbjct: 722 DFVGGWSDTPPWSLERAGYVLNMAITLEGSLPIGTIIETTNQMGISIQDDAGNELHIEDP 781
Query: 598 TPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAV 657
I TPF+ NDPFRLVKSALLVTG++ E ++S GL I+TWANVPRGSGLGTSSILAAAV
Sbjct: 782 ISIKTPFEVNDPFRLVKSALLVTGIVQENFVDSTGLAIKTWANVPRGSGLGTSSILAAAV 841
Query: 658 VKALLQITDGDQSNENVARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQV 717
VK LLQI++GD+SNEN+ARLVL+LEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIP+RLQV
Sbjct: 842 VKGLLQISNGDESNENIARLVLVLEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPMRLQV 901
Query: 718 IPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNG 777
+PLLASPQLI EL+QRLLVVFTGQVRLAHQVL KVVTRYLQRDNLLISSIKRLTELAK+G
Sbjct: 902 VPLLASPQLISELEQRLLVVFTGQVRLAHQVLHKVVTRYLQRDNLLISSIKRLTELAKSG 961
Query: 778 RDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFA 837
R+ALMNC+VDE+G IM EAWRLHQELDP+CSNEFVD+LF F+ PY G+KLVGAGGGGF+
Sbjct: 962 REALMNCEVDEVGDIMSEAWRLHQELDPYCSNEFVDKLFEFSQPYSSGFKLVGAGGGGFS 1021
Query: 838 LLLAKDAESATELRRMLEKDSNFNSEVYNWNI 869
L+LAKDAE A ELR+ LE+ + F+ +VYNW+I
Sbjct: 1022 LILAKDAEKAKELRQRLEEHAEFDVKVYNWSI 1053
>sp|Q8N0W3|FUK_HUMAN L-fucose kinase OS=Homo sapiens GN=FUK PE=2 SV=2
Length = 1084
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 182/367 (49%), Gaps = 19/367 (5%)
Query: 520 VDHPFQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKM 579
V+ P + V E P R+DF+GGWSDTPP + E G VL +A+ ++ PIG
Sbjct: 698 VELPGPGQWVVAECPARVDFSGGWSDTPPLAYELGGAVLGLAVRVDGRRPIGARARRIPE 757
Query: 580 SGVLIS-----DDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIH--------EK 626
+ ++ D+ ++ L + + P L+K+A + G++H E+
Sbjct: 758 PELWLAVGPRQDEMTVKIVCRCLADLRDYCQPHAPGALLKAAFICAGIVHVHSELQLSEQ 817
Query: 627 LIESMG--LQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQL 684
L+ + G ++ TW+ +P GSGLGTSSILA + AL + E + VL LEQ+
Sbjct: 818 LLRTFGGGFELHTWSELPHGSGLGTSSILAGTALAALQRAAGRVVGTEALIHAVLHLEQV 877
Query: 685 MGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRL 744
+ TGGGWQDQ+GGL PGIK S +PL+++V + + +L LL+V+TG+ RL
Sbjct: 878 LTTGGGWQDQVGGLMPGIKVGRSRAQLPLKVEVEEVTVPEGFVQKLNDHLLLVYTGKTRL 937
Query: 745 AHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELD 804
A +LQ V+ + R ++ + L + + + LG+ + W + +
Sbjct: 938 ARNLLQDVLRSWYARLPAVVQNAHSLVRQTEECAEGFRQGSLPLLGQCLTSYWEQKKLMA 997
Query: 805 PHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEV 864
P C V R+ P+ G L GAGGGGF LL K+ + L +L K
Sbjct: 998 PGCEPLTVRRMMDVLAPHVHGQSLAGAGGGGFLYLLTKEPQQKEALEAVLAKTEGLG--- 1054
Query: 865 YNWNIYL 871
N++I+L
Sbjct: 1055 -NYSIHL 1060
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 158/386 (40%), Gaps = 46/386 (11%)
Query: 23 IITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALL 82
+I +P + A NHGV + G LV D+ + E+ + + DGR L
Sbjct: 173 VIALPGSPAYAQNHGVYLTDPQG---------LVLDIYYQGTEAEIQR--CVRPDGRVPL 221
Query: 83 DTGIIAVRGKAWEELVMLSCSCPPMVSEL---LKSGK---EMSLYEDLVAAWVP--AKHD 134
+G++ + E L+ S PP+ + L SG ++SL+ D++ + D
Sbjct: 222 VSGVVFFSVETAERLLATHVS-PPLDACTYLGLDSGARPVQLSLFFDILHCMAENVTRED 280
Query: 135 WLMLRP--LGKELVSKLG-----KQRMFSYCAYELLFLHFGTSSEVLDHLSGDVSGLVGR 187
+L+ RP LG+ G + +++ + L + + SS +++ S +
Sbjct: 281 FLVGRPPELGQGDADVAGYLQSARAQLWRELRDQPLTMAY-VSSGSYSYMTSSASEFLLS 339
Query: 188 RHLCSIPATTVSD--------IAASAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLS 239
L P + +AA + V+S + V +G S++ ++ I IG+
Sbjct: 340 LTLPGAPGAQIVHSQVEEQQLLAAGSSVVSCLLEGPVQLGPGSVLQHCHLQGPIHIGAGC 399
Query: 240 IVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVYCGLHDNPKNSLTKDGT 299
+V G + + +L H L G G D+ + GT
Sbjct: 400 LVTGLDTAHSKALHGRELRDLVLQGHH----TRLHGSPGHAFTLVGRLDSWERQ--GAGT 453
Query: 300 FCGKPWQKVWHDLGIQESDLW-SSTGSQEKCLWNAKIFPILSYSEMLTLATWLMGLSDHK 358
+ PW + + G++ DLW T E CL +A++FP+L S L L+ + DH+
Sbjct: 454 YLNVPWSEFFKRTGVRAWDLWDPETLPAEYCLPSARLFPVLHPSRELGPQD-LLWMLDHQ 512
Query: 359 T--GFLLPLWKNSRRVSLEELHRSID 382
G L W+ S R+S E+L +D
Sbjct: 513 EDGGEALRAWRASWRLSWEQLQPCLD 538
>sp|Q9LY82|GLAK2_ARATH Probable glucuronokinase 2 OS=Arabidopsis thaliana GN=GLCAK2 PE=2
SV=1
Length = 366
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 5/198 (2%)
Query: 639 ANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVAR--LVLLLEQLMGTGGGWQDQIG 696
N+PR +GL SS + +A + LL + QS R L+L E+ +G G QD++
Sbjct: 123 TNIPRQTGLSGSSAIVSAALSCLLDFYNVRQSIRIEVRPNLILNAEKELGIVAGLQDRVA 182
Query: 697 GLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRY 756
+Y G F + + + + L L +++ + +V V R+
Sbjct: 183 QVYGGGLVHMDFS--KEHMDKVGYGIYTIMDINLLPPLHLIYAENPSDSGKVHSTVRRRW 240
Query: 757 LQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQEL-DPHCSNEFVDRL 815
L D +ISS+ + +LA+ GR AL+ D L ++M + L + + C +
Sbjct: 241 LDGDEFIISSMAEIAKLAEEGRTALLKKDYSNLKELMNRNFDLRRSMFGDECLGAMNIEM 300
Query: 816 FAFADPYCCGYKLVGAGG 833
A K G+GG
Sbjct: 301 VEVARKIGAAAKFTGSGG 318
>sp|Q8U0F3|KIME_PYRFU Mevalonate kinase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM
3638 / JCM 8422 / Vc1) GN=mvk PE=3 SV=1
Length = 334
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 112/241 (46%), Gaps = 30/241 (12%)
Query: 622 VIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLL 681
V+ E +++G+++ + +P G+GLG+S+ +A A + A+ ++ + S E +A++
Sbjct: 90 VLEEADKKNVGIKVSITSQIPVGAGLGSSAAVAVATIGAVSKLLGLELSKEEIAKMGHKT 149
Query: 682 EQLMGTGGGWQDQIGGLYPGIKFTSSF----PGIPLRLQVIPLLASPQLILELQQRLLVV 737
E L+ Q G+ P + F G + + +P + P ++V
Sbjct: 150 ELLV------QGASSGIDPTVSAIGGFIFYEKG---KFEHLPFMELP---------IVVG 191
Query: 738 FTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALM-NCDVDE----LGKI 792
+TG +++ V RY + L++ ++ + ++ + +D ++ N D +E LG +
Sbjct: 192 YTGSSGPTKELVAMVRKRYEEMPELIVPILEAMGKVVEKAKDVILSNVDKEEKFERLGVL 251
Query: 793 MLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGG--FALLLAKDAESATEL 850
M L L + + + ++A G K+ GAGGGG +AL K E AT +
Sbjct: 252 MNINHGLLDALGV-STKKLSELVYAARVAGALGAKITGAGGGGCMYALAPNKQREVATAI 310
Query: 851 R 851
R
Sbjct: 311 R 311
>sp|Q5JJC6|KIME_PYRKO Mevalonate kinase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918
/ JCM 12380 / KOD1) GN=mvk PE=3 SV=1
Length = 337
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 622 VIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLL 681
V E + G+ + + +P G+GLG+S+ +A A + A+ ++ + SNE V +L +
Sbjct: 93 VREEADVNGKGITVSITSQIPVGAGLGSSAAVAVATIGAVSRLLGLELSNEEVGKLGHKV 152
Query: 682 EQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPL-RLQVIPLLASPQLILELQQRLLVVFTG 740
E L+ Q G+ P + F + + +P + P L+V +TG
Sbjct: 153 ELLV------QGASSGIDPTVSAIGGFIHYQKGKFEHLPFMELP---------LVVGYTG 197
Query: 741 QVRLAHQVLQKVVTRYLQRDNL---LISSIKRLTELAKNGRDALMNCDVDE------LGK 791
+++ V Y + + +++S+ RL E A+ ++ D+D LGK
Sbjct: 198 SSGSTKELVAMVRKNYEEMPEIFEPILNSMGRLVEKARE----VITSDLDRELKFQTLGK 253
Query: 792 IMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGG--FALLLAKDAESATE 849
+M L L + + + ++A G K+ GAGGGG +AL K +E AT
Sbjct: 254 LMNINHGLLDALGV-STKKLSELVYAARTAGALGAKITGAGGGGCMYALAPGKQSEVATA 312
Query: 850 L 850
+
Sbjct: 313 I 313
>sp|Q93ZC9|GLAK1_ARATH Glucuronokinase 1 OS=Arabidopsis thaliana GN=GLCAK1 PE=1 SV=1
Length = 362
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 639 ANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVAR--LVLLLEQLMGTGGGWQDQIG 696
N+PR +GL SS + +A + LL + + R +VL E+ +G G QD++
Sbjct: 123 TNIPRQTGLSGSSAIVSAALNCLLDFYNVRHLIKVQVRPNIVLSAEKELGIVAGLQDRVA 182
Query: 697 GLYPGI---KFTSSF-----PGI--PLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAH 746
+Y G+ F+ GI P+ + ++P L +++ +
Sbjct: 183 QVYGGLVHMDFSKEHMDKLGHGIYTPMDISLLPPLH-------------LIYAENPSDSG 229
Query: 747 QVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQEL-DP 805
+V V R+L D +ISS+K + LA+ GR AL+N D +L ++M + + + +
Sbjct: 230 KVHSMVRQRWLDGDEFIISSMKEVGSLAEEGRTALLNKDHSKLVELMNLNFDIRRRMFGD 289
Query: 806 HCSNEFVDRLFAFADPYCCGYKLVGAGG 833
C + A K G+GG
Sbjct: 290 ECLGAMNIEMVEVARRVGAASKFTGSGG 317
>sp|Q9V187|KIME_PYRAB Mevalonate kinase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=mvk
PE=3 SV=1
Length = 335
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 632 GLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGW 691
G+ + + +P G+GLG+S+ +A A + A+ ++ D + S E +A++ +E L+
Sbjct: 101 GVSVSITSQIPVGAGLGSSAAVAVATIGAVSKLLDLELSKEEIAKMGHKVELLV------ 154
Query: 692 QDQIGGLYPGIKFTSSFPGIPL-RLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQ 750
Q G+ P + F + +P + P ++V +TG +++
Sbjct: 155 QGASSGIDPTVSAIGGFLYYKQGEFEHLPFVELP---------IVVGYTGSSGSTKELVA 205
Query: 751 KVVTRYLQRDNLLISSIKRLTELAKNGRDALMN-CDVDE----LGKIMLEAWRLHQELDP 805
V RY + L+ ++ + +L ++ +++ D +E LG++M L L
Sbjct: 206 MVRRRYEEMPELIEPILESMGKLVDKAKEVIISKLDEEEKFLKLGELMNINHGLLDALGV 265
Query: 806 HCSNEFVDRLFAFADPYCCGYKLVGAGGGG--FALLLAKDAESATELR 851
+ + + ++A G KL GAGGGG +AL K E AT ++
Sbjct: 266 -STKKLSELVYAARTAGAIGAKLTGAGGGGCMYALAPGKQREVATAIK 312
>sp|Q58487|KIME_METJA Mevalonate kinase OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=mvk PE=1 SV=1
Length = 312
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 632 GLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGW 691
G +I + +P GLG+S+ + +KA+ + + ++ +A+L ++E+ +
Sbjct: 94 GFKINISSKIPISCGLGSSASITIGTIKAVSGFYNKELKDDEIAKLGYMVEKEIQGKASI 153
Query: 692 QDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQK 751
D Y GI + ++ + L + + L+V+ + + L
Sbjct: 154 TDTSTITYKGILEIKNNKFRKIKGEFEEFLKNC--------KFLIVYAEKRKKKTAELVN 205
Query: 752 VVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEF 811
V + +D + E+ K +AL + ++ GK+M + L ++L + S
Sbjct: 206 EVAKIENKDEIF-------KEIDKVIDEALKIKNKEDFGKLMTKNHELLKKL--NISTPK 256
Query: 812 VDRLFAFADPYCCGYKLVGAGGGGFALLLA 841
+DR+ + + G KL GAGGGG ++L
Sbjct: 257 LDRIVDIGNRFGFGAKLTGAGGGGCVIILV 286
>sp|C6A3T5|KIME_THESM Mevalonate kinase OS=Thermococcus sibiricus (strain MM 739 / DSM
12597) GN=mvk PE=3 SV=1
Length = 333
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 22/237 (9%)
Query: 622 VIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLL 681
++ E+ + G+ + + +P G+GLG+S+ +A A + A+ ++ + + E VA+L +
Sbjct: 89 LVMEEAEKQKGVTVSITSQIPVGAGLGSSAAVAVATIGAVSRLFGLELTPEEVAKLGHKV 148
Query: 682 EQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQ 741
E L + G GI T S G L Q + P ++EL ++V +TG
Sbjct: 149 ELL----------VQGASSGIDPTVSAIGGFLYYQKGSFESLP--VVELP--IVVGYTGS 194
Query: 742 VRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALM-----NCDVDELGKIMLEA 796
+++ KV Y + ++ + + L + R+ ++ LG +M
Sbjct: 195 SGSTKELVAKVRKNYEEMPEIIDPILNSMGRLVEKAREVILAEYDKEIKFKRLGTLMNIN 254
Query: 797 WRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGG--FALLLAKDAESATELR 851
L L + D ++A + G K+ GAGGGG +AL K +E AT ++
Sbjct: 255 HGLLDALGV-STKSLSDLVYASREAGALGAKITGAGGGGCMYALAPEKQSEVATAIK 310
>sp|O59291|KIME_PYRHO Mevalonate kinase OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=mvk PE=3
SV=1
Length = 335
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 24/229 (10%)
Query: 631 MGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGG 690
+G+ + + +P G+GLG+S+ +A A + A+ ++ + S E +A+L +E L+
Sbjct: 100 VGIDVSITSQIPVGAGLGSSAAVAVATIGAVSRLLGLELSKEEIAKLGHKVELLV----- 154
Query: 691 WQDQIGGLYPGIKFTSSFPGIPL-RLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVL 749
Q G+ P + F + + +P + P ++V +TG +++
Sbjct: 155 -QGASSGIDPTVSAVGGFLYYKQGKFEPLPFMELP---------IVVGYTGSTGSTKELV 204
Query: 750 QKVVTRYLQRDNLLISSIKRLTELAKNGRDALMN-CDVDE----LGKIMLEAWRLHQELD 804
V RY + L+ ++ + +L ++ +++ D +E LG++M L L
Sbjct: 205 AMVRKRYEEMPELVEPILEAMGKLVDKAKEIILSKLDEEEKLTKLGELMNINHGLLDALG 264
Query: 805 PHCSNEFVDRLFAFADPYCCGYKLVGAGGGG--FALLLAKDAESATELR 851
+ + + ++A G KL GAGGGG +AL + E AT ++
Sbjct: 265 V-STKKLGELVYAARTAGAIGAKLTGAGGGGCMYALAPGRQREVATAIK 312
>sp|B6YST1|KIME_THEON Mevalonate kinase OS=Thermococcus onnurineus (strain NA1) GN=mvk
PE=3 SV=1
Length = 334
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 104/228 (45%), Gaps = 26/228 (11%)
Query: 632 GLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGW 691
G+ + + +P G+GLG+S+ +A A + A+ ++ + SNE +A+L +E L+
Sbjct: 100 GVTVSITSQIPVGAGLGSSAAVAVATIGAVSRLLGLELSNEEIAKLGHKVELLV------ 153
Query: 692 QDQIGGLYPGIKFTSSFPGIPL-RLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQ 750
Q G+ P + F + +P + P ++V +TG +++
Sbjct: 154 QGASSGIDPTVSAIGGFLHYEKGNFEHLPFMELP---------IVVGYTGSSGSTKELVA 204
Query: 751 KVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVD------ELGKIMLEAWRLHQELD 804
V Y + ++ + + ++ + +D L++ ++D +LG++M L L
Sbjct: 205 MVRRNYEEMPEVIEPILVSMGKIVEKAKDVLLS-ELDNEVRFVQLGRLMNINHGLLDALG 263
Query: 805 PHCSNEFVDRLFAFADPYCCGYKLVGAGGGG--FALLLAKDAESATEL 850
+ + + ++A G K+ GAGGGG +AL K +E AT +
Sbjct: 264 V-STKKLSELVYAARTAGALGAKITGAGGGGCMYALAPEKQSEVATAI 310
>sp|O58107|GAL1_PYRHO Galactokinase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=galK PE=1 SV=1
Length = 350
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 150/369 (40%), Gaps = 79/369 (21%)
Query: 529 VKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGV-LISDD 587
+KV+ P R++ G +D G V+ +AI+L T IE K V L S+
Sbjct: 2 IKVKSPGRVNLIGEHTDYT------YGYVMPMAINLY------TKIEAEKHGEVILYSEH 49
Query: 588 AGNQ--LHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGS 645
G + + DL + D+ VK + V+ E E G++ R N+P G+
Sbjct: 50 FGEERKFSLNDLRKENSWIDY------VKG---IFWVLKESDYEVGGIKGRVSGNLPLGA 100
Query: 646 GLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLE-QLMGTGGGWQDQIGGLYPGIKF 704
GL +S+ +++ L ++ + + + L E + +G G DQ ++
Sbjct: 101 GLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFGREGN 160
Query: 705 TSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLI 764
L + IP P+ + +LV +TG R + + Y +R ++
Sbjct: 161 VIFLDTHTLDYEYIPF---PKDV-----SILVFYTGVRR------ELASSEYAERKHIAE 206
Query: 765 SSIK----------RLTELAK--------------------NGRDALMNCDVDELGKIML 794
S+K R EL+K RDAL +V+E+GKI+
Sbjct: 207 ESLKILGKGSSKEVREGELSKLPPLHRKFFGYIVRENARVLEVRDALKEGNVEEVGKILT 266
Query: 795 EA-WRLHQELDPHCS--NEFVDRLFAFADPYCCGYKLVGAGGGGFALLLA--KDAESATE 849
A W L + + C + FV+R G +L GAG GG A+ L +DAE+ E
Sbjct: 267 TAHWDLAKNYEVSCKELDFFVERALKLG---AYGARLTGAGFGGSAIALVDKEDAETIGE 323
Query: 850 --LRRMLEK 856
LR L++
Sbjct: 324 EILREYLKR 332
>sp|P04385|GAL1_YEAST Galactokinase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GAL1 PE=1 SV=4
Length = 528
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 632 GLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDG---DQSNENVARLVLLLEQLMGTG 688
GLQ+ +VP GSGL +S+ AV A+++ G S +N+ R+ ++ E +G
Sbjct: 153 GLQVFCEGDVPTGSGLSSSAAFICAVALAVVKANMGPGYHMSKQNLMRITVVAEHYVGVN 212
Query: 689 GGWQDQIG--------GLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLV 736
G DQ LY ++F P + P L + ++ + L+V
Sbjct: 213 NGGMDQAASVCGEEDHALY--VEFKPQLKATPFKF---PQLKNHEISFVIANTLVV 263
>sp|O14772|FPGT_HUMAN Fucose-1-phosphate guanylyltransferase OS=Homo sapiens GN=FPGT PE=1
SV=2
Length = 594
Score = 40.4 bits (93), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 164 FLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDI----AASAVVLSSKIAHGVSIG 219
F H GT+ E L + + D S L L SI + DI ++ ++ S + S+
Sbjct: 356 FYHIGTTEEYLFYFTSDNS-LKSELGLQSITFSIFPDIPECSGKTSCIIQSILDSRCSVA 414
Query: 220 EDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTER 279
S++ S + + +G I+ G+ +A A SF C + + C +
Sbjct: 415 PGSVVEYSRLGPDVSVGENCIISGSYILTKAALPAH-SFV-------CSLSLKMNRCLKY 466
Query: 280 VLVYCGLHDNPKNS--------LTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCL- 330
+ G+ DN K S L + C VW +L + E +L+S + CL
Sbjct: 467 ATMAFGVQDNLKKSVKTLSDIKLLQFFGVCFLSCLDVW-NLKVTE-ELFSG---NKTCLS 521
Query: 331 -WNAKIFPIL-SYSEMLTLATWLMGLSDHKTGFLLPLWKNSRRVSLEELHRSIDFSEMCT 388
W A+IFP+ S S+ + + ++ +K+ F L +K +S+EE+ D +M T
Sbjct: 522 LWTARIFPVCSSLSDSVITSLKMLNAVKNKSAFSLNSYK---LLSIEEMLIYKDVEDMIT 578
>sp|C5A7L8|KIME_THEGJ Mevalonate kinase OS=Thermococcus gammatolerans (strain DSM 15229 /
JCM 11827 / EJ3) GN=mvk PE=3 SV=1
Length = 334
Score = 40.4 bits (93), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 103/228 (45%), Gaps = 26/228 (11%)
Query: 632 GLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGW 691
G+ + + +P G+GLG+S+ +A A + A+ ++ + +NE + +L +E L+
Sbjct: 100 GITVSITSQIPVGAGLGSSAAVAVATIGAVSRLLGLELTNEEIGKLGHRVELLV------ 153
Query: 692 QDQIGGLYPGIKFTSSFPGIPL-RLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQ 750
Q G+ P + F + + +P + P ++V +TG +++
Sbjct: 154 QGASSGIDPTVSAIGGFIHYEKGKFEPLPFMELP---------IVVGYTGSSGSTKELVA 204
Query: 751 KVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDE------LGKIMLEAWRLHQELD 804
V + ++ + + ++ + ++ L++ D++E LGK+M L L
Sbjct: 205 MVRRTREEMPEIIEPILLSMGKVVEKAKEILLS-DLEEKIRFERLGKLMNINHGLLDALG 263
Query: 805 PHCSNEFVDRLFAFADPYCCGYKLVGAGGGG--FALLLAKDAESATEL 850
+ + + ++A G K+ GAGGGG +AL K +E AT +
Sbjct: 264 V-STKKLSELVYAARTAGALGAKITGAGGGGCMYALAPEKQSEVATAI 310
>sp|A0KQH8|GAL1_AERHH Galactokinase OS=Aeromonas hydrophila subsp. hydrophila (strain
ATCC 7966 / NCIB 9240) GN=galK PE=3 SV=1
Length = 382
Score = 40.0 bits (92), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 75/187 (40%), Gaps = 31/187 (16%)
Query: 519 FVDHPFQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTK 578
F + Q + V P R++ G +D G VL AI E+ + IG ++
Sbjct: 11 FAEQFEQQPDLLVRAPGRVNLIGEHTDYND------GFVLPCAIDYETCVAIGLRDDSLV 64
Query: 579 MSGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTW 638
+I+ D GNQ DL + P H+ R V + E+ GL +
Sbjct: 65 H---VIAADYGNQ---RDLFDLDQPIGHHADQRWSDYIRGVVKYLQERGYPLRGLNLVVS 118
Query: 639 ANVPRGSGLGTSSILAAAVVKAL-----LQITDGD-----QSNENVARLVLLLEQLMGTG 688
NVP+G+GL +S+ L A+ +A L IT + Q EN Q +G
Sbjct: 119 GNVPQGAGLSSSASLEVAIGQAFKEALGLAITQAEIALNGQQAEN---------QFVGCN 169
Query: 689 GGWQDQI 695
G DQ+
Sbjct: 170 CGIMDQM 176
>sp|B9MJX8|ISPE_CALBD 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 /
DSM 6725 / Z-1320) GN=ispE PE=3 SV=1
Length = 286
Score = 38.1 bits (87), Expect = 0.28, Method: Composition-based stats.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 570 IGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIE 629
I TI++T + ++ N IE+ I T N P A + ++ E+
Sbjct: 26 IRTIMQTVDLYDII------NIEKIEEDNIIVTTSSENIPTDNKNHAYIAASLLKERFGV 79
Query: 630 SMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGG 689
G++I N+P +GL S AAAV+K L +I + L L +QLM G
Sbjct: 80 KQGVRIHIEKNIPVSAGLAGGSTDAAAVLKGLNEIFE----------LNLSEQQLMEIG- 128
Query: 690 GWQDQIGGLYPG--IKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQ 747
+IG P + T+ GI + VI L ++PQ+ + + + + V T V ++
Sbjct: 129 ---REIGADVPFCLVGGTALCEGIGEK--VIKLKSAPQMNILIAKPEVYVSTQAV---YE 180
Query: 748 VLQKVVTRYLQRDNL--LISSIKR--LTELAKN 776
L +++ +R N+ +IS+I+ + E+AKN
Sbjct: 181 ALD--LSKIKKRPNIEAMISAIEEGNVKEIAKN 211
>sp|Q6PFM4|LNPB_DANRE Protein lunapark-B OS=Danio rerio GN=lnpb PE=2 SV=2
Length = 402
Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 715 LQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELA 774
+ +PLLA P L+L L++ L+ +F+ + + L+ + T Q+ +L ++ TE
Sbjct: 75 ITALPLLAFPALVLLLRKMLIFLFSKRTERNNDKLEDLKT---QKRKILEEVME--TETY 129
Query: 775 KNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP 821
KN + L D + K EA + + P E R A A P
Sbjct: 130 KNAKLILERFDPESKKKAEAEATPVRPHMTPRPGQELRQRHIAMATP 176
>sp|O42821|GAL1_CANPA Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1
Length = 504
Score = 37.7 bits (86), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 617 LLVTGVIHEKLIESM-GLQIRTWANVPRGSGLGTSSILAAAVVKALLQITD-GDQSNENV 674
++ + + EK + + G+ I VP G GL +S+ A A+L D S ++
Sbjct: 122 IVASKFLQEKAMTKLKGMNITFSGTVPTGGGLSSSAAFCVASTLAVLYANGVEDISKADL 181
Query: 675 ARLVLLLEQLMGTGGGWQDQIGGLYPG------IKFTSSFPGIPLRLQV 717
R+ ++ E +G G DQ +Y I+F G P V
Sbjct: 182 TRITVVSEHYLGLNNGGMDQCASVYGEQGKALFIQFKPQLKGTPFEFPV 230
>sp|P56091|GAL1_CANAX Galactokinase OS=Candida albicans GN=GAL1 PE=3 SV=1
Length = 515
Score = 37.7 bits (86), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 632 GLQIRTWANVPRGSGLGTSSILAAAVVKALLQITD-GDQSNENVARLVLLLEQLMGTGGG 690
G+++ NVP G GL +S+ A A+L D + ++ R+ ++ E +G G
Sbjct: 143 GMKLTFDGNVPTGGGLSSSAAFCVASTLAILHANGVKDITKADLTRITVVCEHYVGVNTG 202
Query: 691 WQDQIGGLY--PG----IKFTSSFPGIPLRLQV 717
DQ +Y P I+F G P + V
Sbjct: 203 GMDQCASVYGEPDKALLIQFKPKLIGKPFKFPV 235
>sp|Q1WV68|ISPE_LACS1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Lactobacillus
salivarius (strain UCC118) GN=ispE PE=3 SV=1
Length = 289
Score = 37.0 bits (84), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 27/155 (17%)
Query: 616 ALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVA 675
A ++ KL + G++I ++P +G+G S AAAV++ L +I + + S E +A
Sbjct: 69 AYQAAKLLQSKLDKPEGVEIEIDKHIPVSAGMGGGSADAAAVLRGLNKIWNLNMSREELA 128
Query: 676 RLVLLL----------EQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQ 725
+L L + E + TG G K T P P+ L ++A PQ
Sbjct: 129 KLALTIDSDVPFCVYSEPALVTGRGE-----------KITPIGPLPPMWL----VIAKPQ 173
Query: 726 LILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRD 760
+ L + + L HQ +Q VV+ Q+D
Sbjct: 174 ASVSTPTILRQIH--EQHLNHQEVQNVVSAIKQQD 206
>sp|B2G9P6|GAL1_LACRJ Galactokinase OS=Lactobacillus reuteri (strain JCM 1112) GN=galK
PE=3 SV=1
Length = 392
Score = 36.6 bits (83), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 756 YLQRDNLLISSIKRL---TELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFV 812
YL D+ LI + E K DA+ D++ELG+ ++ A + + D + + +
Sbjct: 265 YLIDDDTLIRRARHAVSENERTKKAIDAMEKGDLEELGR-LINASHVSLKYDYEVTGKEL 323
Query: 813 DRLF--AFADPYCCGYKLVGAGGGGFALLLAKDAES 846
D L A+ P C G ++VG G G A+ + K +E+
Sbjct: 324 DTLAENAWNQPGCLGARMVGGGFAGSAIAIVKKSEA 359
>sp|A5VME2|GAL1_LACRD Galactokinase OS=Lactobacillus reuteri (strain DSM 20016) GN=galK
PE=3 SV=1
Length = 392
Score = 36.6 bits (83), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 756 YLQRDNLLISSIKRL---TELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFV 812
YL D+ LI + E K DA+ D++ELG+ ++ A + + D + + +
Sbjct: 265 YLIDDDTLIRRARHAVSENERTKKAIDAMEKGDLEELGR-LINASHVSLKYDYEVTGKEL 323
Query: 813 DRLF--AFADPYCCGYKLVGAGGGGFALLLAKDAES 846
D L A+ P C G ++VG G G A+ + K +E+
Sbjct: 324 DTLAENAWNQPGCLGARMVGGGFAGSAIAIVKKSEA 359
>sp|Q9HDU2|GAL1_SCHPO Galactokinase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=gal1 PE=3 SV=1
Length = 519
Score = 36.6 bits (83), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 632 GLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQ-SNENVARLVLLLEQLMGTGGG 690
GL++ NVP G GL +S+ A + A+L+ + + E++ ++ ++ E +G G
Sbjct: 147 GLKLIFDGNVPTGGGLSSSAAFCVASILAILKANGINTITKEDLVKISVVSEHYVGVNTG 206
Query: 691 WQDQIGGLYPG------IKFTSSFPGIPLRLQVI 718
DQ +Y ++F P ++ V+
Sbjct: 207 GMDQCASIYGEQNKALLVQFKPKLMATPFKMPVL 240
>sp|P13045|GAL3_YEAST Protein GAL3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GAL3 PE=1 SV=2
Length = 520
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 631 MGLQIRTWANVPRGSGLGTSSILAAAVVKALLQI-TDGDQSNENVARLVLLLEQLMGTGG 689
+G QI +++P G GL ++ AAA+ + + D S +++ R+ + E +G
Sbjct: 146 VGAQIFCQSDIPTGGGLSSAFTCAAALATIRANMGKNFDISKKDLTRITAVAEHYVGVNN 205
Query: 690 GWQDQIGGLY 699
G DQ +Y
Sbjct: 206 GGMDQATSVY 215
>sp|C5D7U9|MTNW_GEOSW 2,3-diketo-5-methylthiopentyl-1-phosphate enolase OS=Geobacillus
sp. (strain WCH70) GN=mtnW PE=3 SV=1
Length = 413
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 405 CINYGMLGRNLSQLCEEILQKELSGVDICKD 435
I GM+GR+L+ L E++ Q+ L GVD+ KD
Sbjct: 144 SIFKGMIGRDLTYLSEQLKQQALGGVDLVKD 174
>sp|B7IDE2|GAL1_THEAB Galactokinase OS=Thermosipho africanus (strain TCF52B) GN=galK PE=3
SV=1
Length = 352
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 31/198 (15%)
Query: 529 VKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDA 588
+KV+ P R++ G +D G VL AI L I E+ K S++
Sbjct: 1 MKVKAPGRVNLIGEHTDYND------GFVLPFAIDRYVELEIE---ESDKF--CFYSNNL 49
Query: 589 GNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMG-----LQIRTWANVPR 643
++ + L + D+ + GVI E IE G ++I+ +N+P
Sbjct: 50 NEEVKLSSLQKTNSWADY------------IVGVIKE--IEKRGYKIQPVKIKVDSNIPI 95
Query: 644 GSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLE-QLMGTGGGWQDQIGGLYPGI 702
G+GL +S+ L A A+ + + S ++ ++ E +G G DQ +
Sbjct: 96 GAGLSSSAALEVASAYAISEYFGLNLSKIDIVKISREAEANFVGVNCGIMDQFASAFSKK 155
Query: 703 KFTSSFPGIPLRLQVIPL 720
+ + L Q +PL
Sbjct: 156 DYAIFLDTMTLDFQFVPL 173
>sp|P56599|GAL1_CANMA Galactokinase (Fragment) OS=Candida maltosa GN=GAL1 PE=3 SV=1
Length = 214
Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 605 DHNDPFRLVKSALLVTG-VIHEKLIESM-GLQIRTWANVPRGSGLGTSSILAAAVVKALL 662
+H+ K AL+V + E+ + S+ G+++ NVP G GL +S+ A A++
Sbjct: 108 EHHSWANYFKCALIVAKQYLEERGVTSLKGMKLTFNGNVPTGGGLSSSAAFCVASTLAII 167
Query: 663 QITD-GDQSNENVARLVLLLEQLMGTGGGWQDQ 694
+ D + +++ R+ ++ E +G G DQ
Sbjct: 168 RANGITDLTKQDLTRITVVSEHYVGVNTGGMDQ 200
>sp|B3DVI7|ISPE_METI4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
OS=Methylacidiphilum infernorum (isolate V4) GN=ispE
PE=3 SV=1
Length = 287
Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 632 GLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLV 678
GL+I+ VP G+GLG S AAAV+ +L ++ D++ EN+ RL
Sbjct: 88 GLRIKLTKIVPPGAGLGGGSSDAAAVLFSLNRMLAIDETMENLIRLA 134
>sp|Q9V1H6|AROK_PYRAB Shikimate kinase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=aroK
PE=3 SV=1
Length = 274
Score = 33.9 bits (76), Expect = 5.2, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 610 FRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQ 669
+RLV S V V+ E E G++ +++P G GL +SS A ++ KAL++ +
Sbjct: 57 YRLVNS---VISVLREVTGEPFGVRFEIHSDIPVGKGLKSSSAAANSLTKALVEALRLNI 113
Query: 670 SNENVARLVLLLEQLMGT--GGGWQDQIGGLYPGIKFTSSF 708
+ ++ +L + + G G + D + G+ T ++
Sbjct: 114 DDLSIVKLGVEAAKRAGVTITGAFDDACASYFGGLCITDNY 154
>sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=1 SV=2
Length = 496
Score = 33.9 bits (76), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%)
Query: 631 MGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGG 690
+GL + VP GSGL +S+ + A++ + + + +A+L E+ +GT G
Sbjct: 148 VGLDVLVDGIVPTGSGLSSSAAFVCSATIAIMAVFGHNFEKKELAQLTCECERHIGTQSG 207
Query: 691 WQDQIGGLYPGIKFTSSFPGIPLRLQVIPL 720
DQ + F P+R + L
Sbjct: 208 GMDQAISIMAKTGFAELIDFNPVRATDVKL 237
>sp|A4XLL8|ISPE_CALS8 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=ispE PE=3 SV=1
Length = 290
Score = 33.9 bits (76), Expect = 5.4, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 570 IGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIE 629
I TI++T + ++ N IE+ + I T N P A + ++ E+
Sbjct: 26 IRTIMQTVDLYDII------NIEKIEEDSIIVTTSSENIPTDNKNHAYIAASLVKERFGV 79
Query: 630 SMGLQIRTWANVPRGSGLGTSSILAAAVVKAL 661
G++I N+P +GL S AAAV++ L
Sbjct: 80 KEGVKIHIQKNIPISAGLAGGSTDAAAVLRGL 111
>sp|Q9FIZ7|OPLA_ARATH 5-oxoprolinase OS=Arabidopsis thaliana GN=OXP1 PE=2 SV=1
Length = 1266
Score = 33.9 bits (76), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 526 PRTVKVELPVRIDFAGGWSDTPPWSLERAG 555
P T KVE ++ F GGW DTP + LE G
Sbjct: 654 PVTPKVERHYKVYFEGGWHDTPLFKLENLG 683
>sp|Q99MZ6|MYO7B_MOUSE Unconventional myosin-VIIb OS=Mus musculus GN=Myo7b PE=1 SV=3
Length = 2113
Score = 33.9 bits (76), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 563 SLESSLPIGTIIETTKMSGVLISDDAGNQ--LHIEDLTPIATPFDHN------DPFRLVK 614
S ++ + IG I++ TK+ LI DD G + +H EDL+ + P N D RL
Sbjct: 17 SSKTGVAIGGIVKETKLGKTLIEDDEGKEHWVHAEDLSTL-RPMHPNSAQGVDDMIRL-- 73
Query: 615 SALLVTGVIHEKLIESMGLQIRTWA 639
L GV+H LI +I T+
Sbjct: 74 GDLNEAGVVHNLLIRYQQHKIYTYT 98
>sp|B0TVZ0|ISPE_FRAP2 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Francisella
philomiragia subsp. philomiragia (strain ATCC 25017)
GN=ispE PE=3 SV=1
Length = 275
Score = 33.1 bits (74), Expect = 9.9, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 628 IESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARL 677
IES+G+ I N+P G+GLG S AA + AL + SNE + L
Sbjct: 84 IESIGVDIDIIKNIPMGAGLGGGSSNAATTLIALRDYYLPELSNEQMIPL 133
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 331,764,109
Number of Sequences: 539616
Number of extensions: 14441542
Number of successful extensions: 35118
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 35067
Number of HSP's gapped (non-prelim): 89
length of query: 873
length of database: 191,569,459
effective HSP length: 126
effective length of query: 747
effective length of database: 123,577,843
effective search space: 92312648721
effective search space used: 92312648721
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)