Query 002861
Match_columns 873
No_of_seqs 448 out of 2464
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:27:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002861.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002861hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k85_A D-glycero-D-manno-hepto 100.0 7.7E-47 2.6E-51 422.5 25.3 317 528-857 3-322 (357)
2 3k17_A LIN0012 protein; protei 100.0 8.5E-39 2.9E-43 358.1 37.5 309 528-857 6-342 (365)
3 2pg9_A Phosphomevalonate kinas 100.0 1.8E-38 6.2E-43 352.2 34.2 306 528-869 3-331 (337)
4 4hac_A Mevalonate kinase; GHMP 100.0 7.8E-37 2.7E-41 336.9 37.1 300 522-872 15-316 (321)
5 3v2u_C Protein GAL3; rossmann 100.0 8.9E-37 3E-41 352.3 34.8 310 529-857 40-488 (520)
6 3gon_A Phosphomevalonate kinas 100.0 1.7E-36 6E-41 335.6 34.2 307 529-871 2-331 (335)
7 2a2c_A N-acetylgalactosamine k 100.0 4.7E-36 1.6E-40 347.7 37.3 305 528-857 55-447 (478)
8 1pie_A Galactokinase; galactos 100.0 8.1E-36 2.8E-40 340.9 36.9 316 529-870 49-410 (419)
9 1wuu_A Galactokinase; galactos 100.0 2.1E-35 7.3E-40 335.3 38.1 316 528-870 36-391 (399)
10 1kvk_A MK, mevalonate kinase; 100.0 2.9E-35 9.9E-40 333.9 34.4 313 528-870 5-373 (395)
11 2hfs_A Mevalonate kinase, puta 100.0 4.4E-34 1.5E-38 316.5 34.9 308 529-870 14-325 (332)
12 2cz9_A Probable galactokinase; 100.0 1.1E-33 3.9E-38 315.4 36.7 311 529-870 2-345 (350)
13 2x7i_A Mevalonate kinase; tran 100.0 6.2E-34 2.1E-38 312.0 33.9 299 527-870 5-307 (308)
14 1kkh_A Mevalonate kinase; mixe 100.0 5.6E-33 1.9E-37 305.7 34.9 308 526-870 3-316 (317)
15 2oi2_A Mevalonate kinase; enzy 100.0 8.6E-32 3E-36 292.5 34.6 276 528-858 5-283 (292)
16 1h72_C HK, homoserine kinase; 100.0 5.1E-27 1.8E-31 255.5 28.2 277 528-858 2-281 (296)
17 3hul_A HSK, HK, homoserine kin 99.9 4.6E-25 1.6E-29 240.2 30.9 279 529-872 3-284 (298)
18 3pyf_A 4-diphosphocytidyl-2-C- 99.9 2.7E-25 9.4E-30 242.8 26.8 284 528-871 5-294 (306)
19 2gs8_A Mevalonate pyrophosphat 99.9 1.4E-22 4.7E-27 222.9 30.6 292 527-870 7-312 (317)
20 3qt5_A Mevalonate diphosphate 99.9 1E-22 3.5E-27 224.8 29.1 297 528-867 9-321 (332)
21 2v8p_A 4-diphosphocytidyl-2-C- 99.9 4.4E-24 1.5E-28 229.6 17.6 250 529-852 5-260 (271)
22 2ww4_A 4-diphosphocytidyl-2C-m 99.9 3.1E-23 1E-27 224.3 17.4 252 529-857 3-264 (283)
23 1uek_A 4-(cytidine 5'-diphosph 99.9 3.7E-23 1.3E-27 222.8 16.7 261 529-871 2-267 (275)
24 1fi4_A Mevalonate 5-diphosphat 99.8 8.3E-19 2.8E-23 199.3 33.8 292 528-857 25-346 (416)
25 2hke_A Diphosphomevalonate dec 99.8 7.3E-17 2.5E-21 181.4 28.8 262 554-858 33-318 (380)
26 3lto_A Mevalonate diphosphate 99.7 1.1E-15 3.6E-20 166.7 22.5 207 629-865 89-315 (323)
27 3f0n_A Mevalonate pyrophosphat 99.6 3E-14 1E-18 158.4 20.6 204 631-858 122-344 (414)
28 3brk_X Glucose-1-phosphate ade 99.4 3.5E-13 1.2E-17 153.6 9.1 228 1-271 132-392 (420)
29 1yp2_A Glucose-1-phosphate ade 99.3 2.5E-12 8.6E-17 147.8 8.0 229 1-268 142-414 (451)
30 2iu8_A LPXD, UDP-3-O-[3-hydrox 98.9 5.6E-10 1.9E-14 125.1 2.5 69 3-95 18-89 (374)
31 1hm9_A GLMU, UDP-N-acetylgluco 98.4 2.6E-07 9E-12 106.3 7.4 80 2-99 109-194 (468)
32 4fce_A Bifunctional protein GL 98.3 9.2E-07 3.2E-11 101.3 9.7 65 17-100 125-189 (459)
33 2ggo_A 401AA long hypothetical 98.3 1.7E-06 5.9E-11 97.3 10.2 211 2-269 97-330 (401)
34 3c8v_A Putative acetyltransfer 98.2 2.1E-07 7.1E-12 106.9 1.1 220 5-268 97-357 (496)
35 2v0h_A Bifunctional protein GL 98.2 2E-06 6.7E-11 98.5 8.3 78 3-99 104-185 (456)
36 3st8_A Bifunctional protein GL 98.1 5.4E-06 1.8E-10 96.3 9.9 67 17-101 139-205 (501)
37 3brk_X Glucose-1-phosphate ade 96.5 0.0074 2.5E-07 68.0 10.0 59 204-273 319-377 (420)
38 3kwd_A Carbon dioxide concentr 96.3 0.0059 2E-07 62.2 7.5 40 210-249 130-169 (213)
39 3pnn_A Conserved domain protei 96.0 0.0015 5.2E-08 70.5 1.2 88 1-97 121-228 (303)
40 2qh5_A PMI, ALGA, mannose-6-ph 95.9 0.0027 9.4E-08 68.6 2.8 85 1-99 110-203 (308)
41 3juk_A UDP-glucose pyrophospho 95.9 0.0039 1.3E-07 66.2 3.9 81 1-99 127-218 (281)
42 4ecm_A Glucose-1-phosphate thy 95.7 0.0074 2.5E-07 63.7 4.8 75 1-99 129-207 (269)
43 3r8y_A 2,3,4,5-tetrahydropyrid 95.6 0.0092 3.1E-07 61.9 5.0 41 209-249 139-189 (240)
44 3ixc_A Hexapeptide transferase 95.5 0.014 4.9E-07 58.3 6.0 39 211-249 74-118 (191)
45 1xhd_A Putative acetyltransfer 95.5 0.021 7.1E-07 56.0 6.8 40 210-249 52-96 (173)
46 3r3r_A Ferripyochelin binding 95.3 0.018 6.1E-07 57.1 5.9 39 211-249 56-106 (187)
47 1xhd_A Putative acetyltransfer 95.3 0.021 7.3E-07 55.9 6.3 60 199-268 58-123 (173)
48 3ixc_A Hexapeptide transferase 95.3 0.015 5E-07 58.2 5.1 50 209-268 95-145 (191)
49 3kwd_A Carbon dioxide concentr 95.3 0.029 1E-06 56.9 7.4 49 210-268 112-161 (213)
50 2x65_A Mannose-1-phosphate gua 95.2 0.0046 1.6E-07 67.8 1.0 91 1-100 106-206 (336)
51 1v3w_A Ferripyochelin binding 95.0 0.031 1.1E-06 54.8 6.6 40 210-249 72-112 (173)
52 1v3w_A Ferripyochelin binding 94.9 0.04 1.4E-06 54.0 6.9 48 210-267 50-102 (173)
53 3r1w_A Carbonic anhydrase; bet 94.9 0.028 9.7E-07 55.7 6.0 39 211-249 60-110 (189)
54 1qre_A Carbonic anhydrase; bet 94.9 0.039 1.3E-06 57.5 7.0 41 209-249 140-181 (247)
55 3r8y_A 2,3,4,5-tetrahydropyrid 94.8 0.017 5.9E-07 59.8 4.3 35 209-243 121-156 (240)
56 3r3r_A Ferripyochelin binding 94.8 0.036 1.2E-06 54.8 6.5 51 208-268 82-133 (187)
57 1qre_A Carbonic anhydrase; bet 94.8 0.052 1.8E-06 56.5 7.7 53 211-273 101-178 (247)
58 3c8v_A Putative acetyltransfer 94.8 0.028 9.5E-07 64.5 6.0 52 193-244 309-360 (496)
59 3r1w_A Carbonic anhydrase; bet 94.6 0.058 2E-06 53.4 7.2 39 211-249 89-128 (189)
60 2pa4_A UTP-glucose-1-phosphate 94.4 0.025 8.4E-07 61.4 4.3 79 1-96 139-227 (323)
61 1yp2_A Glucose-1-phosphate ade 94.3 0.037 1.3E-06 62.9 5.6 48 197-244 351-417 (451)
62 3jqy_B NEUO, polysialic acid O 94.2 0.043 1.5E-06 57.3 5.7 34 210-243 106-143 (252)
63 2cu2_A Putative mannose-1-phos 94.0 0.023 7.7E-07 62.2 3.0 88 1-99 106-202 (337)
64 1fxo_A Glucose-1-phosphate thy 93.7 0.057 1.9E-06 57.8 5.4 74 2-97 108-186 (293)
65 2v0h_A Bifunctional protein GL 93.7 0.056 1.9E-06 61.2 5.6 41 209-249 283-323 (456)
66 4evw_A Nucleoside-diphosphate- 93.6 0.11 3.7E-06 54.3 7.3 68 1-92 112-180 (255)
67 4ea9_A Perosamine N-acetyltran 93.6 0.092 3.2E-06 53.4 6.5 40 210-249 130-171 (220)
68 1lvw_A Glucose-1-phosphate thy 93.5 0.053 1.8E-06 58.1 4.8 73 3-97 110-187 (295)
69 4fce_A Bifunctional protein GL 93.5 0.092 3.2E-06 59.5 7.0 41 209-249 286-326 (459)
70 2ggo_A 401AA long hypothetical 93.4 0.052 1.8E-06 60.4 4.7 38 211-248 264-302 (401)
71 3bfp_A Acetyltransferase; LEFT 93.3 0.065 2.2E-06 53.6 4.8 40 210-249 108-149 (194)
72 3srt_A Maltose O-acetyltransfe 93.3 0.08 2.7E-06 52.7 5.4 39 211-249 98-156 (188)
73 3vbi_A ANTD, galactoside O-ace 93.3 0.093 3.2E-06 52.7 5.9 33 209-241 70-106 (205)
74 1mc3_A Glucose-1-phosphate thy 93.3 0.045 1.6E-06 58.6 3.7 73 2-96 109-186 (296)
75 3r5d_A Tetrahydrodipicolinate 93.1 0.061 2.1E-06 57.9 4.3 49 209-268 230-287 (347)
76 1hm9_A GLMU, UDP-N-acetylgluco 93.0 0.071 2.4E-06 60.7 5.0 49 200-249 300-349 (468)
77 3ftt_A Putative acetyltransfer 93.0 0.11 3.7E-06 52.3 5.8 39 211-249 96-154 (199)
78 3fsy_A Tetrahydrodipicolinate 93.0 0.071 2.4E-06 57.0 4.5 48 210-268 208-264 (332)
79 2e3d_A UTP--glucose-1-phosphat 93.0 0.074 2.5E-06 56.9 4.8 80 1-99 134-229 (302)
80 3tv0_A Dynactin subunit 6; LEF 92.9 0.081 2.8E-06 52.8 4.8 32 210-241 86-117 (194)
81 3jqy_B NEUO, polysialic acid O 92.9 0.16 5.3E-06 53.0 7.0 62 197-268 110-196 (252)
82 3st8_A Bifunctional protein GL 92.7 0.1 3.5E-06 60.1 5.8 42 202-243 362-403 (501)
83 2p2o_A Maltose transacetylase; 92.4 0.12 4.2E-06 51.3 5.2 40 210-249 95-154 (185)
84 3nz2_A Hexapeptide-repeat cont 92.4 0.14 4.9E-06 51.1 5.8 39 211-249 98-156 (195)
85 3hjj_A Maltose O-acetyltransfe 92.4 0.16 5.4E-06 50.5 6.0 40 210-249 99-158 (190)
86 1tzf_A Glucose-1-phosphate cyt 92.1 0.051 1.8E-06 56.5 2.1 67 2-94 129-199 (259)
87 3vbi_A ANTD, galactoside O-ace 92.0 0.19 6.6E-06 50.4 6.2 40 210-249 92-158 (205)
88 2pig_A Putative transferase; S 91.9 0.11 3.8E-06 56.6 4.5 40 210-249 84-123 (334)
89 2wlg_A Polysialic acid O-acety 91.8 0.34 1.2E-05 49.0 7.9 18 209-226 100-117 (215)
90 3gos_A 2,3,4,5-tetrahydropyrid 91.8 0.12 4.3E-06 54.6 4.7 15 227-241 178-192 (276)
91 3pmo_A UDP-3-O-[3-hydroxymyris 91.8 0.098 3.4E-06 57.9 4.1 34 209-242 161-195 (372)
92 3eg4_A 2,3,4,5-tetrahydropyrid 91.7 0.11 3.6E-06 56.0 4.1 13 227-239 203-215 (304)
93 2ux8_A Glucose-1-phosphate uri 91.7 0.032 1.1E-06 59.7 -0.1 81 1-99 138-227 (297)
94 2pig_A Putative transferase; S 91.6 0.18 6.1E-06 54.9 5.8 51 193-243 163-218 (334)
95 3pmo_A UDP-3-O-[3-hydroxymyris 91.5 0.11 3.7E-06 57.6 4.0 41 209-249 143-185 (372)
96 3bfp_A Acetyltransferase; LEFT 91.3 0.14 4.6E-06 51.2 4.1 32 210-241 126-158 (194)
97 1krr_A Galactoside O-acetyltra 91.1 0.27 9.3E-06 49.5 6.1 14 211-224 97-110 (203)
98 2iu8_A LPXD, UDP-3-O-[3-hydrox 91.0 0.14 4.7E-06 56.8 4.1 48 211-268 156-205 (374)
99 1ocx_A Maltose O-acetyltransfe 90.9 0.3 1E-05 48.3 6.1 40 210-249 93-152 (182)
100 3mc4_A WW/RSP5/WWP domain:bact 90.7 0.28 9.5E-06 52.1 6.0 40 210-249 191-240 (287)
101 1j2z_A Acyl-[acyl-carrier-prot 90.5 0.19 6.6E-06 52.9 4.6 33 209-241 31-64 (270)
102 3eg4_A 2,3,4,5-tetrahydropyrid 90.2 0.21 7.1E-06 53.7 4.5 42 201-242 144-186 (304)
103 1krr_A Galactoside O-acetyltra 90.2 0.2 6.9E-06 50.5 4.2 56 213-285 129-186 (203)
104 3gos_A 2,3,4,5-tetrahydropyrid 90.1 0.23 7.8E-06 52.6 4.7 43 201-243 119-168 (276)
105 3r5d_A Tetrahydrodipicolinate 90.1 0.3 1E-05 52.6 5.5 53 210-273 209-275 (347)
106 3oam_A 3-deoxy-manno-octuloson 89.8 0.14 4.7E-06 53.3 2.8 74 17-100 119-198 (252)
107 4ea9_A Perosamine N-acetyltran 89.4 0.29 1E-05 49.6 4.8 32 210-241 148-180 (220)
108 3ftt_A Putative acetyltransfer 89.0 0.38 1.3E-05 48.1 5.2 35 209-243 74-111 (199)
109 3fsy_A Tetrahydrodipicolinate 88.9 0.46 1.6E-05 50.8 5.9 58 210-281 234-291 (332)
110 1ocx_A Maltose O-acetyltransfe 88.9 0.23 7.7E-06 49.2 3.4 29 213-241 126-155 (182)
111 3tk8_A 2,3,4,5-tetrahydropyrid 88.7 0.38 1.3E-05 51.9 5.3 9 120-128 72-80 (316)
112 4e79_A UDP-3-O-acylglucosamine 88.6 0.31 1.1E-05 53.6 4.5 31 211-241 134-165 (357)
113 1ssq_A SAT, serine acetyltrans 88.6 0.42 1.4E-05 50.2 5.3 41 209-249 163-213 (267)
114 3eh0_A UDP-3-O-[3-hydroxymyris 88.5 0.23 7.9E-06 54.2 3.4 16 227-242 201-216 (341)
115 3f1x_A Serine acetyltransferas 88.4 0.35 1.2E-05 51.9 4.7 22 228-249 253-275 (310)
116 1t3d_A SAT, serine acetyltrans 88.3 0.44 1.5E-05 50.6 5.3 40 210-249 184-233 (289)
117 4e79_A UDP-3-O-acylglucosamine 88.2 0.25 8.5E-06 54.4 3.4 9 57-65 43-51 (357)
118 3srt_A Maltose O-acetyltransfe 88.0 0.45 1.5E-05 47.2 4.9 33 209-241 76-111 (188)
119 3eh0_A UDP-3-O-[3-hydroxymyris 87.9 0.32 1.1E-05 53.1 4.1 16 226-241 163-178 (341)
120 2qia_A UDP-N-acetylglucosamine 87.7 0.6 2.1E-05 48.6 6.0 35 209-243 53-100 (262)
121 3t57_A UDP-N-acetylglucosamine 87.7 0.43 1.5E-05 51.1 4.9 34 209-242 55-93 (305)
122 1j2z_A Acyl-[acyl-carrier-prot 87.7 0.34 1.2E-05 51.0 4.1 32 210-241 26-58 (270)
123 3tk8_A 2,3,4,5-tetrahydropyrid 87.6 0.4 1.4E-05 51.7 4.5 15 211-225 170-184 (316)
124 3r0s_A Acyl-[acyl-carrier-prot 87.4 0.48 1.6E-05 49.7 5.0 35 209-243 52-100 (266)
125 4hur_A Virginiamycin A acetylt 87.4 0.47 1.6E-05 48.2 4.7 23 227-249 120-143 (220)
126 3mqg_A Lipopolysaccharides bio 87.1 0.37 1.3E-05 47.7 3.7 31 211-241 29-60 (192)
127 3r0s_A Acyl-[acyl-carrier-prot 87.1 0.44 1.5E-05 49.9 4.5 34 209-242 34-68 (266)
128 4eqy_A Acyl-[acyl-carrier-prot 87.1 0.79 2.7E-05 48.5 6.5 16 210-225 101-116 (283)
129 4eqy_A Acyl-[acyl-carrier-prot 87.1 0.54 1.8E-05 49.8 5.2 35 209-243 70-117 (283)
130 3tv0_A Dynactin subunit 6; LEF 86.9 0.34 1.2E-05 48.1 3.3 34 211-244 32-69 (194)
131 3t57_A UDP-N-acetylglucosamine 86.6 0.45 1.5E-05 51.0 4.3 50 212-271 40-95 (305)
132 3fs8_A QDTC; acetyltransferase 86.6 0.58 2E-05 49.0 5.1 32 210-241 89-121 (273)
133 2qia_A UDP-N-acetylglucosamine 86.4 0.61 2.1E-05 48.6 5.1 35 209-243 35-70 (262)
134 2wlg_A Polysialic acid O-acety 86.2 0.75 2.6E-05 46.4 5.5 35 210-244 80-118 (215)
135 3fs8_A QDTC; acetyltransferase 86.1 0.8 2.7E-05 47.9 5.8 40 210-249 71-112 (273)
136 3nz2_A Hexapeptide-repeat cont 85.7 0.77 2.6E-05 45.7 5.2 35 209-243 76-113 (195)
137 3q1x_A Serine acetyltransferas 85.7 0.76 2.6E-05 49.4 5.5 31 227-267 224-255 (313)
138 3hsq_A Acyl-[acyl-carrier-prot 85.1 1 3.4E-05 46.9 6.0 16 227-242 80-95 (259)
139 2rij_A Putative 2,3,4,5-tetrah 85.1 0.75 2.6E-05 50.7 5.1 30 227-267 291-320 (387)
140 3mc4_A WW/RSP5/WWP domain:bact 85.1 0.96 3.3E-05 47.9 5.8 10 296-305 255-264 (287)
141 4e6u_A Acyl-[acyl-carrier-prot 84.8 1.2 4.3E-05 46.3 6.6 15 210-224 86-100 (265)
142 1ssq_A SAT, serine acetyltrans 84.7 0.74 2.5E-05 48.3 4.7 34 210-243 190-224 (267)
143 3hsq_A Acyl-[acyl-carrier-prot 84.2 0.79 2.7E-05 47.7 4.7 30 212-241 33-63 (259)
144 3eev_A Chloramphenicol acetylt 84.0 0.88 3E-05 45.9 4.7 15 210-224 59-73 (212)
145 3k8d_A 3-deoxy-manno-octuloson 83.8 0.24 8.1E-06 52.1 0.4 75 17-101 135-215 (264)
146 3hjj_A Maltose O-acetyltransfe 83.7 1 3.4E-05 44.6 5.0 35 209-243 78-115 (190)
147 3f1x_A Serine acetyltransferas 83.7 1.1 3.6E-05 48.2 5.4 32 211-242 253-285 (310)
148 1t3d_A SAT, serine acetyltrans 81.6 1.2 4E-05 47.3 4.7 33 210-242 210-243 (289)
149 4e6u_A Acyl-[acyl-carrier-prot 81.2 1.7 5.8E-05 45.3 5.8 41 209-249 110-152 (265)
150 2p2o_A Maltose transacetylase; 80.2 1.6 5.3E-05 43.1 4.8 30 213-242 128-158 (185)
151 1jyk_A LICC protein, CTP:phosp 78.3 7.8 0.00027 39.8 9.8 70 1-97 124-193 (254)
152 2icy_A Probable UTP-glucose-1- 78.1 5.9 0.0002 44.9 9.3 87 2-101 220-311 (469)
153 3eev_A Chloramphenicol acetylt 77.4 1.5 5.3E-05 44.0 3.9 33 210-242 112-145 (212)
154 3tqd_A 3-deoxy-manno-octuloson 77.3 2 6.8E-05 44.7 4.8 74 17-99 127-206 (256)
155 2rij_A Putative 2,3,4,5-tetrah 76.1 2.4 8.3E-05 46.6 5.2 30 210-241 243-273 (387)
156 4e8l_A Virginiamycin A acetylt 75.1 2.5 8.6E-05 42.9 4.7 16 227-242 119-134 (219)
157 1mr7_A Streptogramin A acetylt 73.7 3.5 0.00012 41.5 5.3 13 229-241 116-128 (209)
158 1xat_A Xenobiotic acetyltransf 72.2 3.4 0.00012 41.7 4.8 16 227-242 111-126 (212)
159 4hur_A Virginiamycin A acetylt 69.7 2.7 9.2E-05 42.5 3.4 33 210-242 120-153 (220)
160 3q1x_A Serine acetyltransferas 67.9 3 0.0001 44.8 3.4 35 209-243 223-258 (313)
161 4e8l_A Virginiamycin A acetylt 65.8 4.2 0.00014 41.2 3.9 34 209-242 118-152 (219)
162 1mr7_A Streptogramin A acetylt 62.3 5.5 0.00019 40.0 4.0 34 209-242 113-147 (209)
163 1xat_A Xenobiotic acetyltransf 58.5 6 0.00021 39.8 3.5 33 210-242 111-144 (212)
164 1jv1_A Glcnac1P uridyltransfer 51.3 9.4 0.00032 43.7 4.0 89 2-100 251-344 (505)
165 2y6p_A 3-deoxy-manno-octuloson 40.3 20 0.00068 35.8 4.0 50 35-99 133-182 (234)
166 1vic_A 3-deoxy-manno-octuloson 38.0 11 0.00039 38.6 1.7 74 17-99 119-201 (262)
167 2i5k_A UTP--glucose-1-phosphat 36.2 25 0.00086 39.9 4.4 88 1-101 232-324 (488)
168 1h7e_A 3-deoxy-manno-octuloson 33.5 27 0.00093 35.0 3.8 67 18-98 119-187 (245)
169 4fcu_A 3-deoxy-manno-octuloson 28.5 57 0.002 33.4 5.2 71 18-99 121-198 (253)
No 1
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.7e-47 Score=422.47 Aligned_cols=317 Identities=25% Similarity=0.376 Sum_probs=237.8
Q ss_pred eEEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCCCCC
Q 002861 528 TVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHN 607 (873)
Q Consensus 528 ~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~~~~ 607 (873)
.++++|||||+|+|||+||++|+..+||.||++||+++++ ++++++++..|++.+.........++.+ +....
T Consensus 3 mi~~~APgRvnL~GehtD~~~~~~~~gG~vl~~AId~~~~----v~i~~~~d~~i~i~s~~~~~~~~~~~~~---~~~~~ 75 (357)
T 3k85_A 3 LVRSKAPLRLGLAGGGSDVSPYSDIYGGLILNATINLYAY----CTIEETNSGRIEINAYDAQCCKSYLSMS---QLEID 75 (357)
T ss_dssp CEEEEEEEEEEEECTTTTSTTHHHHTCEEEEEEEEEEEEE----EEEEECSSSEEEEEETTTTEEEEEECCS---SCCCC
T ss_pred EEEEECceEEEEecCCccCcchhhcCCCEEEEEEEeCcEE----EEEEECCCCeEEEEECCCCceEEEeccc---ccccc
Confidence 3789999999999999999999999999999999999987 7888888888999876544222222222 12335
Q ss_pred ChhHHHHHHHHHhhhhhhccc-cccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH-Hc
Q 002861 608 DPFRLVKSALLVTGVIHEKLI-ESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQ-LM 685 (873)
Q Consensus 608 ~~~~~~kaal~~~~~~~~~~~-~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~-~~ 685 (873)
+|.+|+++++..+.. ... ...||+|++.++||.|+|||||||+++|++.|++++++.++++++|+++|..+|+ +.
T Consensus 76 ~~~~~v~~~~~~l~~---~~~~~~~g~~i~i~~~iP~g~GLgSSaa~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~ 152 (357)
T 3k85_A 76 GEASLIKGVYNRIIR---DYRLEPKSFKITTYNDAPAGSGLGTSSTMVVCILKAFIEWLSLPLGDYETSRLAYEIERKDL 152 (357)
T ss_dssp SSSHHHHHHHHHHHH---HTTCCCCCEEEEEEESSCSSSSSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHTTT
T ss_pred chHHHHHHHHHHHHH---hcCCCCCCEEEEEecCCCCCCCchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHc
Confidence 789999999987752 222 2579999999999999999999999999999999999999999999999999998 57
Q ss_pred CCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcCHHHHH
Q 002861 686 GTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLIS 765 (873)
Q Consensus 686 g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~~~~~~ 765 (873)
|++||++||+++++||+..+.+.++. ...++++++++.+...++..++|++|+.+++|+++++++++.+...+....+
T Consensus 153 G~~~G~~D~~a~~~Gg~~~~~~~~~~--~~~~~~l~~~~~~~~~l~~~lvi~~t~~~~~a~~~l~~~~~~~~~~~~~~~~ 230 (357)
T 3k85_A 153 GLSGGKQDQYAAAFGGFNYMEFLQND--LVIVNPLKMKRWIVDELESSMVLYFTGRSRSSAAIINEQKKNTSEGNQTAIE 230 (357)
T ss_dssp CCCCCSHHHHHHHHCSEEEEEEETTT--EEEEEEECCCHHHHHHHHHTEEEECC---------------------CCTTH
T ss_pred cCCCcHHHHHHHHhCCceEEEEeCCC--ceeEEEEecChhhhhhcCceEEEEECCCcccHHHHHHHHHHHhhcCcHHHHH
Confidence 99999999999999999988765543 3467888887654333456899999999999999999876554332222345
Q ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEEEeCCc
Q 002861 766 SIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALLLAKDA 844 (873)
Q Consensus 766 ~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~l~~~~ 844 (873)
.++.+.+.+.++.+||.++|++.|+++|+++|++++++..++++|++++|++.+++ |++|+|+||||+|||+++|+++
T Consensus 231 ~~~~i~~~~~~~~~aL~~~d~~~lg~lm~~~~~~l~~~~~~vs~p~ld~l~~~a~~~Ga~GaklsGaG~gG~vial~~~- 309 (357)
T 3k85_A 231 AMHKIKQSAIDTKLALLKGDVGEFARILGEGWENKKKMAGAITNPMIQEAFDVATGAGAMAGKVSGAGGGGFIMFVVEP- 309 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTC-----------CCSCTTTTSCCSEEEECCCC---CEEEECCH-
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcCCeEeEecccCCCCEEEEEecH-
Confidence 67777788889999999999999999999999999887335899999999999987 8999999999999999999985
Q ss_pred chHHHHHHHHHhc
Q 002861 845 ESATELRRMLEKD 857 (873)
Q Consensus 845 ~~a~~i~~~L~~~ 857 (873)
+.++++.+.|++.
T Consensus 310 ~~~~~~~~~l~~~ 322 (357)
T 3k85_A 310 TRKEEVVRALNNL 322 (357)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHC
Confidence 6789999999875
No 2
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua}
Probab=100.00 E-value=8.5e-39 Score=358.11 Aligned_cols=309 Identities=18% Similarity=0.163 Sum_probs=240.5
Q ss_pred eEEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCCCCC
Q 002861 528 TVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHN 607 (873)
Q Consensus 528 ~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~~~~ 607 (873)
.++++|||||+|+|||+|+. +||.||++||+++.+ +.++++++. .+.+.........++++. .....
T Consensus 6 ~i~~~APGrv~L~GEh~~~~-----~g~~~l~~Ai~~~~~----v~v~~~~~~--~i~s~~~~~~~~~~~~~~--~~~~~ 72 (365)
T 3k17_A 6 KLQVKIPGKLYVAGEYAVVE-----SGHTAILTAVNRYIT----LTLEDSERN--ELWIPHYENPVSWPIGGE--LKPDG 72 (365)
T ss_dssp CEEEEEEEEEEEECTTGGGS-----TTCEEEEEEEEEEEE----EEEEECSSC--EEECTTCSSCBCCCTTSC--CCCSC
T ss_pred EEEEEecceEEEecccEEec-----CCCEEEEEEccCcEE----EEEEECCCc--EEEecCCCcceeeecccC--CCCCC
Confidence 48899999999999999992 289999999999987 788887665 455543321111111111 01122
Q ss_pred ChhHHHHHHHHHhh-hhhhccccccCEEEEEeeccCC----CCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 002861 608 DPFRLVKSALLVTG-VIHEKLIESMGLQIRTWANVPR----GSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLE 682 (873)
Q Consensus 608 ~~~~~~kaal~~~~-~~~~~~~~~~G~~i~i~s~IP~----GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E 682 (873)
++++|+++++..+. .+.+......||+|++.++||. ++|||||||+++|++.|++++++.++++++|+++|..+|
T Consensus 73 ~~~~yv~~~i~~~~~~~~~~g~~~~g~~i~i~s~iP~~~g~~~GLgSSaa~~va~~~al~~~~~~~l~~~~l~~~a~~~E 152 (365)
T 3k17_A 73 EHWTFTAEAINIATTFLKSEGIELTPVKMVIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSH 152 (365)
T ss_dssp GGGHHHHHHHHHHHHHHHHTTCCCCCEEEEEEESSBCTTSCBCSSCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCCCCCCCCCcccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 45599999987653 1111233457999999999996 569999999999999999999999999999999999999
Q ss_pred HHcCCCChhhhhHhhcccCeeEEecCCCC---------cc---------eeEEEeecCChhhhhhcCcEEEEEEeCCcch
Q 002861 683 QLMGTGGGWQDQIGGLYPGIKFTSSFPGI---------PL---------RLQVIPLLASPQLILELQQRLLVVFTGQVRL 744 (873)
Q Consensus 683 ~~~g~~~G~~Dq~~~~~GG~~~~~~~~~~---------~~---------~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~ 744 (873)
+.....+|.+||+++++||+.+++.++.. .+ ...++++++++ + +++|++|+.+++
T Consensus 153 ~~~~g~~~g~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~l~~l~~~~w~~~~~~~l~~~~------~-~lll~~t~~~~s 225 (365)
T 3k17_A 153 LVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPV------P-TFSVGWTGTPVS 225 (365)
T ss_dssp HHHHSSCCSHHHHHHHHCSEEEEECCCHHHHHHHHTTSCHHHHHHSCCTTCEEEEECCCS------S-EEEEEECSCCCC
T ss_pred HHhCCCCCcccHHHHhcCCEEEEecCCHHHhhhhcccchhhhhhccCCCCcceeeccCCc------c-cEEEEECCCccc
Confidence 95433566699999999999887632210 00 23567777653 5 899999999999
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCC----CCChHHHHHHHHHHc
Q 002861 745 AHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDP----HCSNEFVDRLFAFAD 820 (873)
Q Consensus 745 t~~~l~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~----~vs~p~l~~l~~~a~ 820 (873)
|+++++.+.+.....++.....++++.+++.++.+||.++|++.|+++|+++|+.++.+.. .+++|++++|++.++
T Consensus 226 T~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~gd~~~lg~lm~~~~~~l~~l~v~~~~~is~p~ld~l~~~a~ 305 (365)
T 3k17_A 226 TGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSSIKENRRILQELGTKAGVNIETSLLKELADSAE 305 (365)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHTCCCSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhhhcCCcccCHHHHHHHHHHH
Confidence 9999987644333233334566777777889999999999999999999999999998752 349999999999998
Q ss_pred c-CCceEEecCCCccceeEEEeCCcchHHHHHHHHHhc
Q 002861 821 P-YCCGYKLVGAGGGGFALLLAKDAESATELRRMLEKD 857 (873)
Q Consensus 821 ~-ga~G~klsGAGgGG~v~~l~~~~~~a~~i~~~L~~~ 857 (873)
+ |+. +|+||||||||+++|+++++.++++.+.|++.
T Consensus 306 ~~Ga~-ak~sGAGgGg~vial~~~~~~~~~l~~~l~~~ 342 (365)
T 3k17_A 306 NMGGA-GKSSGSGGGDCGIAFSKTKELAEKLVNEWEKL 342 (365)
T ss_dssp HTTSE-EEECTTCSSSEEEEEESSHHHHHHHHHHHHHT
T ss_pred hcCCE-EEecCCCCCCEEEEEECCHHHHHHHHHHHHHC
Confidence 7 777 99999999999999999867789999999986
No 3
>2pg9_A Phosphomevalonate kinase; GHMP kinase superfamily, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A* 3gon_A*
Probab=100.00 E-value=1.8e-38 Score=352.17 Aligned_cols=306 Identities=18% Similarity=0.204 Sum_probs=244.2
Q ss_pred eEEEEeceEEEeecccc-cCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCCCC
Q 002861 528 TVKVELPVRIDFAGGWS-DTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDH 606 (873)
Q Consensus 528 ~v~v~aP~Rv~L~G~~t-D~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~~~ 606 (873)
.++++|||||+|+|||+ ||| ||.|+++||+++.+ ++++++++ +++.++.... .++ + .+
T Consensus 3 mi~~~aPgkv~L~GeH~v~y~------G~~~l~~Ai~~~~~----v~v~~~~~--~~i~s~~~~~----~~~-~----~~ 61 (337)
T 2pg9_A 3 MIAVKTCGKLYWAGEYAILEP------GQLALIKDIPIYMR----AEIAFSDS--YRIYSDMFDF----AVD-L----RP 61 (337)
T ss_dssp CEEEEEEEEEEEECTTGGGST------TCEEEEEEEEEEEE----EEEEECSS--CEEEETTSSS----CBC-S----SC
T ss_pred eEEEeeCceEEEeccceEecC------CCEEEEEEccccEE----EEEEeCCc--EEEecCCCCc----eee-e----cC
Confidence 47899999999999999 787 89999999999887 77877653 6666643321 111 1 11
Q ss_pred CChhHHHHHHHHHhhh-hhhccccccCEEEEEeeccCCC---CCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 002861 607 NDPFRLVKSALLVTGV-IHEKLIESMGLQIRTWANVPRG---SGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLE 682 (873)
Q Consensus 607 ~~~~~~~kaal~~~~~-~~~~~~~~~G~~i~i~s~IP~G---sGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E 682 (873)
.+.++|+++++..+.. .........||+|++.|+||.| +|||||||+++|++.|++++++.++++++|+++|..+|
T Consensus 62 ~~~~~~v~~~i~~~~~~~~~~g~~~~g~~i~i~s~iP~~g~k~GLgSSaa~~va~~~al~~~~~~~l~~~~l~~la~~~E 141 (337)
T 2pg9_A 62 NPDYSLIQETIALMGDFLAVRGQNLRPFSLAIYGKMEREGKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTSAVL 141 (337)
T ss_dssp CTTTHHHHHHHHHHHHHHHHTTCCCCCEEEEEECCSEETTEECSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEccCCCCCCCccccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 2234899888776531 1111234579999999999999 99999999999999999999999999999999999999
Q ss_pred HHcCCCChhhhhHhhcccCeeEEecCCCCc-----------------ceeEEEeecCChhhhhhcCcEEEEEEeCCcchH
Q 002861 683 QLMGTGGGWQDQIGGLYPGIKFTSSFPGIP-----------------LRLQVIPLLASPQLILELQQRLLVVFTGQVRLA 745 (873)
Q Consensus 683 ~~~g~~~G~~Dq~~~~~GG~~~~~~~~~~~-----------------~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t 745 (873)
.+++.++|.+||+++++||+.+++.++... ....++++++++ +.+++|++|+.+++|
T Consensus 142 ~~~~~~~~~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~------~~~lvl~~~~~~~~T 215 (337)
T 2pg9_A 142 LKRGDNGSMGDLACIAAEDLVLYQSFDRQKVAAWLEEENLATVLERDWGFSISQVKPTL------ECDFLVGWTKEVAVS 215 (337)
T ss_dssp HHTTCCSCSHHHHHHHHTSCEEEECCCHHHHHHHHHHSCHHHHHHSCCCCEEEECCCCS------CCEEEEEECCCCCCH
T ss_pred HHhCCCCCHHHHHHHHhCCEEEEecCChHHhhhhhcccchhhhcccccccceeeecCCC------CceEEEEECCCccch
Confidence 988999999999999999999886433210 013567776653 579999999999999
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHcc-CCc
Q 002861 746 HQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP-YCC 824 (873)
Q Consensus 746 ~~~l~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~ 824 (873)
+++++.+.+.+ +. +.++++.+++.++.+||.++|++.|+++|+++|+.++++.+.+++|+++++++.+++ |++
T Consensus 216 ~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~aL~~~d~~~lg~~m~~~~~~l~~l~~~v~~p~l~~l~~~a~~~Ga~ 289 (337)
T 2pg9_A 216 SHMVQQIKQNI---NQ---NFLTSSKETVVSLVEALEQGKSEKIIEQVEVASKLLEGLSTDIYTPLLRQLKEASQDLQAV 289 (337)
T ss_dssp HHHHHHHGGGC---CH---HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHTTTTSSEE
T ss_pred HHHHHHHHHHH---HH---HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCcCCCHHHHHHHHHHHHCCCE
Confidence 99988764321 22 345666777888999999999999999999999999998655899999999999987 888
Q ss_pred eEEecCCCccceeEEEeCCcchHHHHHHHHHhcCCCceEEEEEee
Q 002861 825 GYKLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNI 869 (873)
Q Consensus 825 G~klsGAGgGG~v~~l~~~~~~a~~i~~~L~~~~~~~v~v~~~~i 869 (873)
+|+||||||||+++|+++++.++++++.|++.+ +. .+|..++
T Consensus 290 -ak~sGaGgGg~vial~~~~~~~~~~~~~l~~~g-~~-~~~~~~~ 331 (337)
T 2pg9_A 290 -AKSSGAGGGDCGIALSFDAQSTKTLKNRWADLG-IE-LLYQERI 331 (337)
T ss_dssp -EEECTTCSSSEEEEEECSHHHHHHHHHHHHHTT-CE-EEEEEEC
T ss_pred -EEEeCCCCccEEEEEECCHHHHHHHHHHHHHCC-CE-EEEEeec
Confidence 999999999999999998778899999999874 22 3455544
No 4
>4hac_A Mevalonate kinase; GHMP, ATP binding, phosphorylation, transferase; 1.92A {Methanosarcina mazei}
Probab=100.00 E-value=7.8e-37 Score=336.91 Aligned_cols=300 Identities=19% Similarity=0.225 Sum_probs=235.5
Q ss_pred CCCCCCeEEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCC
Q 002861 522 HPFQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIA 601 (873)
Q Consensus 522 ~~~~~~~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~ 601 (873)
.|..++.++++|||||+|+|+|+|++ ||.+|++||+++++ +++++.++ +++.+... .. .+
T Consensus 15 ~~~~~~mi~~~APgkinL~GeH~~~~------Gg~~l~~aI~~~~~----v~v~~~~~--i~i~~~~~----~~---~~- 74 (321)
T 4hac_A 15 VPRGSHMVSCSAPGKIYLFGEHAVVY------GETAIACAVELRTR----VRAELNDS--ITIQSQIG----RT---GL- 74 (321)
T ss_dssp CCCSCCCEEEEEEEEEEEECTTTGGG------TCCEEEEEEEEEEE----EEEEECSS--EEEEETTE----EE---SS-
T ss_pred cCCCCCEEEEEeeEEEEEEccCEEEc------CCEEEEEEeccCEE----EEEEECCC--EEEEECCC----Cc---cc-
Confidence 35555679999999999999999996 99999999999987 77777543 77765431 01 11
Q ss_pred CCCCCCChhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 002861 602 TPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLL 681 (873)
Q Consensus 602 ~p~~~~~~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~ 681 (873)
+.+.++ +++.+...+. ......|++|++.++||.|+|||||||+++|++.|++++++.++++++|+++|..+
T Consensus 75 -~~~~~~---~~~~~~~~l~----~~~~~~g~~i~i~~~iP~g~GLGSSsa~~va~~~al~~l~~~~l~~~~l~~la~~~ 146 (321)
T 4hac_A 75 -DFEKHP---YVSAVIEKMR----KSIPINGVFLTVDSDIPVGSGLGSSAAVTIASIGALNELFGFGLSLQEIAKLGHEI 146 (321)
T ss_dssp -CTTTSH---HHHHHHHHHT----TTSCCCCEEEEEEECCCSCTTCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred -ccchhH---HHHHHHHHHH----HhCCCCCEEEEEECCCCCCCCccHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 111223 4444444432 12245799999999999999999999999999999999999999999999999999
Q ss_pred HHH-cCCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcC
Q 002861 682 EQL-MGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRD 760 (873)
Q Consensus 682 E~~-~g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~ 760 (873)
|+. .|. +|++||+++++||+.++ .++. ++.+| +++++|++|+.+++|+++++.+.......+
T Consensus 147 e~~~~g~-~~~~D~~~~~~Gg~~~~--~~~~-------~l~~p-------~~~~vlv~p~~~~sT~~~~~~~~~l~~~~~ 209 (321)
T 4hac_A 147 EIKVQGA-ASPTDTYVSTFGGVVTI--PERR-------KLKTP-------DCGIVIGDTGVFSSTKELVANVRQLRESYP 209 (321)
T ss_dssp HHHHHSC-CCSHHHHHHHHCSEEEE--TTCC-------EECCC-------CCEEEEEECCCCCCHHHHHHHHHHHHHHCH
T ss_pred HHHhcCC-CcHHHHHHHHcCCeEEE--cCCc-------eeccC-------CCEEEEEECCCCccHHHHHHHHHHHHhcCH
Confidence 985 466 67799999999999887 2332 22222 468999999999999998876533222122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEE
Q 002861 761 NLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALL 839 (873)
Q Consensus 761 ~~~~~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~ 839 (873)
....+.+.++.+++.++.++|.++|++.|+++|+++|..++.+. +++|+++++++.+++ |++|+||||||+|||+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~al~~~d~~~lg~~~~~~~~~~~~~~--v~~p~l~~l~~~a~~~Ga~ga~~SGaG~GG~v~a 287 (321)
T 4hac_A 210 DLIEPLMTSIGKISRIGEQLVLSGDYASIGRLMNVNQGLLDALG--VNILELSQLIYSARAAGAFGAKITGAGGGGCMVA 287 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT--CCCHHHHHHHHHHHHTTCSEEEECSSCSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhcC--CCCHHHHHHHHHHHHCCCCEEEECccCCCCEEEE
Confidence 22345566777778889999999999999999999988887774 889999999999987 899999999999999999
Q ss_pred EeCCcchHHHHHHHHHhcCCCceEEEEEeeccC
Q 002861 840 LAKDAESATELRRMLEKDSNFNSEVYNWNIYLE 872 (873)
Q Consensus 840 l~~~~~~a~~i~~~L~~~~~~~v~v~~~~i~~~ 872 (873)
|+ +++.++++.+.|++.+ .++|.++++.+
T Consensus 288 l~-~~~~a~~~~~~l~~~g---~~v~~~~~~~~ 316 (321)
T 4hac_A 288 LT-APEKCNQVAEAVAGAG---GKVTITKPTEQ 316 (321)
T ss_dssp EE-CSTTHHHHHHHHHHTT---CEEEEECBCSC
T ss_pred Ec-CHHHHHHHHHHHHhCC---CeEEEEEECCC
Confidence 99 4578999999998763 57888777643
No 5
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A*
Probab=100.00 E-value=8.9e-37 Score=352.32 Aligned_cols=310 Identities=19% Similarity=0.243 Sum_probs=229.8
Q ss_pred EEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEe--cCCcEEEEeCCCC-ceeeecC--CC--CC
Q 002861 529 VKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETT--KMSGVLISDDAGN-QLHIEDL--TP--IA 601 (873)
Q Consensus 529 v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~--~~~~i~i~~~~~~-~~~~~~l--~~--l~ 601 (873)
++++|||||+|+|||+||+ ||.|+++||+++++ +.++++ ++..|++.+.+.. ....+++ ++ +.
T Consensus 40 ~v~~APGRVnLiGEHtDyn------gG~VLp~AI~~~~~----vav~~~~~~d~~i~i~S~~~~~~~~~~~l~~~~~~~~ 109 (520)
T 3v2u_C 40 FIARSPGRVNLIGEHIDYC------DFSVLPLAIDVDML----CAVKILDEKNPSITLTNADPKFAQRKFDLPLDGSYMA 109 (520)
T ss_dssp EEEEEEEEEEEECTTCGGG------TCCBEEEEEEEEEE----EEEEECCCSSCEEEEEESSTTSCCEEEECCTTCCCCC
T ss_pred EEEEcceeEEEeccCeeeC------CCEEEEEEeecceE----EEEEeccCCCCEEEEEECCCCCCceEEEeccCccccc
Confidence 7889999999999999996 99999999999987 778887 7788988875422 1122333 22 11
Q ss_pred CCCCCCChhHHHHHHHHHh-hhhhhc------cccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHh---CCCCCH
Q 002861 602 TPFDHNDPFRLVKSALLVT-GVIHEK------LIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQIT---DGDQSN 671 (873)
Q Consensus 602 ~p~~~~~~~~~~kaal~~~-~~~~~~------~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~---g~~ls~ 671 (873)
.......|.+|+++++..+ ..+... .....||++.|.|+||.|+|| |||+.+|++.|++.++ +.++++
T Consensus 110 i~~~~~~W~~Yv~g~i~~v~~~l~~~~~~~~~g~~~~G~~i~i~s~vP~gsGL--SAA~~va~~~Al~~~~~g~~~~l~~ 187 (520)
T 3v2u_C 110 IDPSVSEWSNYFKCGLHVAHSYLKKIAPERFNNTPLVGAQIFCQSDIPTGGGL--SSAFTCAAALATIRANMGKNFDISK 187 (520)
T ss_dssp CCTTSCCHHHHHHHHHHHHHHHHHHHCHHHHSSSCCCCEEEEEEECCCTTSSH--HHHHHHHHHHHHHHHHHCTTCCCBH
T ss_pred cCcccccHHHHHHHHHHHHHHHHHhhcccccccCCCCceEEEEecCCCCCCCH--HHHHHHHHHHHHHHHhhccCCCCCH
Confidence 1123357999999876432 111111 124579999999999999999 9999999999999999 778999
Q ss_pred HHHHHHHHHHHHHcCCCChhhhhHhhcccC---eeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCC---cchH
Q 002861 672 ENVARLVLLLEQLMGTGGGWQDQIGGLYPG---IKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQ---VRLA 745 (873)
Q Consensus 672 ~eL~~la~~~E~~~g~~~G~~Dq~~~~~GG---~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~---tr~t 745 (873)
.+|+++++.+|+++|.+||+|||+++++|+ ..++++.+. +.++++++|+- ...+..|+|++|++ ++.+
T Consensus 188 ~~la~la~~aE~~vG~~~G~mDQ~as~~G~~g~~l~id~~~~----l~~~~v~~p~~--~~~~~~~vI~ns~v~~~k~~l 261 (520)
T 3v2u_C 188 KDLTRITAVAEHYVGVNNGGMDQATSVYGEEDHALYVEFRPK----LKATPFKFPQL--KNHEISFVIANTLVKSNKFET 261 (520)
T ss_dssp HHHHHHHTTGGGGGTCCCCSHHHHHHHHCBTTBEEEEECSSS----CEEEEECCCCC--SSCEEEEEEEECCCCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCchhhHHHHHhCCCCeEEEEEcCCC----ceeEEeeCCCc--cCCCeEEEEEECCCccccccc
Confidence 999999999999889999999999999998 777776552 35667666530 00246899999998 3422
Q ss_pred ---------------HHHHHH----------------------HHHH---------------------------------
Q 002861 746 ---------------HQVLQK----------------------VVTR--------------------------------- 755 (873)
Q Consensus 746 ---------------~~~l~~----------------------v~~~--------------------------------- 755 (873)
..+|++ +...
T Consensus 262 a~s~YN~Rr~eCe~Aa~~L~~~~g~~~~~~~~~~~~~~~sLRdv~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 341 (520)
T 3v2u_C 262 APTNYNLRVIEVTVAANALATRYSVALPSHKDNSNSERGNLRDFMDAYYARYENQAQPWNGDIGTGIERLLKMLQLVEES 341 (520)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTTBCCCCCCSCSSCTTCCHHHHHHHHHHHHCTTSCCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHhhCCcccccccccccccccHHHHhHhhhhhccccccccccchhhHHHHHHHHHHHHHHH
Confidence 122221 1000
Q ss_pred Hhhc---------------C-H------------------HHHHHHHHHHH--HHHHHHHHHhcc-------CHHHHHHH
Q 002861 756 YLQR---------------D-N------------------LLISSIKRLTE--LAKNGRDALMNC-------DVDELGKI 792 (873)
Q Consensus 756 ~~~~---------------~-~------------------~~~~~~~~i~~--~~~~~~~AL~~g-------d~~~lg~l 792 (873)
+... + + ...+..+-+.| .+.++.++|+++ |++.||++
T Consensus 342 l~~~~~~yt~~e~~~~l~~~~~~l~~~~l~~~~~~~~~~~l~~RA~HVv~E~~Rv~~~~~al~~~~~~~~~~d~~~lg~l 421 (520)
T 3v2u_C 342 FSRKKSGFTVHEASTALNCSREEFTRDYLTTFPVRFQVLKLYQRAKHVYSESLRVLKALKMMTSATFHTDEDFFTDFGRL 421 (520)
T ss_dssp HTTCTTCBCHHHHHHHTTSCHHHHHHHHTSSSCEEESCBCHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHH
T ss_pred hhhccccccHHHHHHhhcCChhhhhhhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhHHHHHHHH
Confidence 0000 0 0 11222233322 356778899987 59999999
Q ss_pred HHHHHHHHhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEEEeC--CcchHHHHHHHHHhc
Q 002861 793 MLEAWRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALLLAK--DAESATELRRMLEKD 857 (873)
Q Consensus 793 m~~~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~l~~--~~~~a~~i~~~L~~~ 857 (873)
|+++|.++++++ ++++|++|.|++++++ |++|+||||||+|||+++|++ +++.++++.+.|++.
T Consensus 422 m~~sH~slr~~~-~vS~peld~lv~~a~~~Ga~GarlTGaG~GGc~iaLv~~~~~~~~~~~~~~l~~~ 488 (520)
T 3v2u_C 422 MNESQASCDKLY-ECSCIETNQICSIALANGSFGSRLTGAGWGGCTIHLVPSGANGNVEQVRKALIEK 488 (520)
T ss_dssp HHHHHHHHHHTS-CCCCHHHHHHHHHHHHTTCSEEEECSSCSSSEEEEEEEESTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCCcHHHHHHHHHHHhCCCCEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHH
Confidence 999999999998 4999999999999987 899999999999999999993 347788888888654
No 6
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A
Probab=100.00 E-value=1.7e-36 Score=335.59 Aligned_cols=307 Identities=17% Similarity=0.192 Sum_probs=238.6
Q ss_pred EEEEeceEEEeecccccC-CCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCCCCC
Q 002861 529 VKVELPVRIDFAGGWSDT-PPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHN 607 (873)
Q Consensus 529 v~v~aP~Rv~L~G~~tD~-~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~~~~ 607 (873)
+.|+|||||.|+|||... + |..+|.+||+++.+ ++++++++..| .++.... .. ++ ..+
T Consensus 2 i~v~apGKviL~GEhaVv~~------G~~Ala~ai~~~~~----v~i~~~~~~~i--~~~~~~~----~~-~~----~~~ 60 (335)
T 3gon_A 2 IAVKTCGKLYWAGEYAILEP------GQLALIKDIPIYMR----AEIAFSDSYRI--YSDMFDF----AV-DL----RPN 60 (335)
T ss_dssp EEEEEEEEEEEECTTGGGST------TCEEEEEEEEEEEE----EEEEECSSCEE--EETTSSS----CB-CS----SCC
T ss_pred EEEEECCEEEEEeeeeEEcC------CCcEEEEEecceEE----EEEEECCCCEE--EEeCCCc----cc-cc----CcC
Confidence 789999999999999654 3 78899999999987 78888766544 3332210 00 11 112
Q ss_pred ChhHHHHHHHHHhh-hhhhccccccCEEEEEeeccCCC---CCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 002861 608 DPFRLVKSALLVTG-VIHEKLIESMGLQIRTWANVPRG---SGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQ 683 (873)
Q Consensus 608 ~~~~~~kaal~~~~-~~~~~~~~~~G~~i~i~s~IP~G---sGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~ 683 (873)
.++++++.++..+. .+........|++++|.+++|.+ +|||||||+++|++.|++++++.++++++++++|..+|+
T Consensus 61 ~~~~~~~~~i~~~~~~l~~~~~~~~~~~i~I~s~lp~~~~~~GLgSSaa~~va~~~al~~~~~~~~~~~~l~~la~~~E~ 140 (335)
T 3gon_A 61 PDYSLIQETIALMGDFLAVRGQNLRPFSLAIYGKMEREGKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTSAVLL 140 (335)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCCCCEEEEEECCSEETTEECSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHcCCCCCceEEEEEecCCcccCCCCcchHHHHHHHHHHhhhhcccccchHHHHHHHHHHHHH
Confidence 34566766655432 12223345689999999999987 699999999999999999999999999999999999999
Q ss_pred HcC-CCChhhhhHhhcccCeeEEecCCCCc-----------------ceeEEEeecCChhhhhhcCcEEEEEEeCCcchH
Q 002861 684 LMG-TGGGWQDQIGGLYPGIKFTSSFPGIP-----------------LRLQVIPLLASPQLILELQQRLLVVFTGQVRLA 745 (873)
Q Consensus 684 ~~g-~~~G~~Dq~~~~~GG~~~~~~~~~~~-----------------~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t 745 (873)
..+ .+|| |||+++.+||..+++..+... ..+.++++..+. ...+++++++..++|
T Consensus 141 ~~~g~~sg-~D~a~a~~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~~~~t 213 (335)
T 3gon_A 141 KRGDNGSM-GDLACIAAEDLVLYQSFDRQKVAAWLEEENLATVLERDWGFSISQVKPTL------ECDFLVGWTKEVAVS 213 (335)
T ss_dssp HTTCCSCS-HHHHHHHHTSCEEEECCCHHHHHHHHHHSCHHHHHHSCCCCEEEECCCCS------CCEEEEEECCCCCCH
T ss_pred HhcCCCCC-CCcceeecCCeEEEEeCCccccceeecccchhheecccccceeEEcCCcc------ccceEEeecCChhhH
Confidence 664 4555 899999999999887544311 023455665543 568999999999999
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHccCCce
Q 002861 746 HQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCG 825 (873)
Q Consensus 746 ~~~l~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~ga~G 825 (873)
++++.++.+.. .. ..+.++.+++.++.++|+++|++.||++|+++|+++++++..+++|++++|++.+++...|
T Consensus 214 ~~~v~~v~~~~---~~---~~~~~~~~~~~~~~~aL~~~d~~~lg~lm~~~h~~l~~l~~~is~p~ld~l~~~a~~~g~~ 287 (335)
T 3gon_A 214 SHMVQQIKQNI---NQ---NFLTSSKETVVSLVEALEQGKSEKIIEQVEVASKLLEGLSTDIYTPLLRQLKEASQDLQAV 287 (335)
T ss_dssp HHHHHHHGGGC---CH---HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHTTTTSSEE
T ss_pred HHHHHHHHHHh---HH---HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHhCCcE
Confidence 99988764332 22 2355666778899999999999999999999999999988668999999999999985558
Q ss_pred EEecCCCccceeEEEeCCcchHHHHHHHHHhcCCCceEEEEEeecc
Q 002861 826 YKLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNIYL 871 (873)
Q Consensus 826 ~klsGAGgGG~v~~l~~~~~~a~~i~~~L~~~~~~~v~v~~~~i~~ 871 (873)
+|+||||||||+++|+++++.+++++++|++++ +.+ +|.-++.-
T Consensus 288 akltGAG~Ggc~ial~~~~~~~~~i~~~~~~~G-i~~-~y~~~~g~ 331 (335)
T 3gon_A 288 AKSSGAGGGDCGIALSFDAQSTKTLKNRWADLG-IEL-LYQERIGH 331 (335)
T ss_dssp EEECTTCSSSEEEEEECSHHHHHHHHHHHHHTT-CEE-EEEEEC--
T ss_pred EEEccccchheEEEEECCHHHHHHHHHHHHHCC-CcE-EeehhhcC
Confidence 999999999999999998788999999999873 333 57766653
No 7
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A*
Probab=100.00 E-value=4.7e-36 Score=347.67 Aligned_cols=305 Identities=17% Similarity=0.158 Sum_probs=229.9
Q ss_pred eEEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCC-ceeeecCCCCCCCCCC
Q 002861 528 TVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGN-QLHIEDLTPIATPFDH 606 (873)
Q Consensus 528 ~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~-~~~~~~l~~l~~p~~~ 606 (873)
.++++||||++|+|||+|++ |+.||++||+++++ ++++++++..+++.+.... .....+++++......
T Consensus 55 ~~~~~APgrv~L~Geh~D~~------g~~vl~~AI~~~~~----v~v~~~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~ 124 (478)
T 2a2c_A 55 KFYVRAPGRVNIIGEHIDYC------GYSVLPMAVEQDVL----IAVEPVKTYALQLANTNPLYPDFSTSANNIQIDKTK 124 (478)
T ss_dssp SEEEEEEEEEEEECTTCGGG------TCCBEEEEEEEEEE----EEEEECSSSCEEEEESSTTSCCEEECCCCC--CCSS
T ss_pred CEEEEeceEEEEeccceeeC------CCeEEEEEecccEE----EEEEECCCCeEEEEECCCCCcceeccchhcccCCCc
Confidence 38899999999999999997 88999999999987 7788877777888764321 1111122332211123
Q ss_pred CChhHHHHHHHHHhh-hhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHc
Q 002861 607 NDPFRLVKSALLVTG-VIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLM 685 (873)
Q Consensus 607 ~~~~~~~kaal~~~~-~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~~ 685 (873)
..|.+++++++..+- .+. . ....|++|++.|+||.|+|||||||+++|++.|++.++|.++++++|+++|..+|++.
T Consensus 125 ~~~~n~v~~a~~~v~~~~~-~-~~~~g~~i~i~s~IP~g~GLgSSAA~~va~~~al~~~~~~~ls~~~l~~la~~~E~~~ 202 (478)
T 2a2c_A 125 PLWHNYFLCGLKGIQEHFG-L-SNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYI 202 (478)
T ss_dssp CCHHHHHHHHHHHHHHHTT-C-CSCCCEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHGGG
T ss_pred ccHHHHHHHHHHHHHHHHh-c-cCCCceEEEEECCCCCCCCchHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhhc
Confidence 468899876655431 111 1 0157999999999999999999999999999999999999999999999999999988
Q ss_pred CCCChhhhhHhhccc---CeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHH----------------
Q 002861 686 GTGGGWQDQIGGLYP---GIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAH---------------- 746 (873)
Q Consensus 686 g~~~G~~Dq~~~~~G---G~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~---------------- 746 (873)
|.++|++||+++++| |+.++++.+ ..+.++++++ +..++|++|+.+++|.
T Consensus 203 g~~~g~~D~~a~~~G~~g~~~~i~f~~-----~~~~~~~~~~------~~~~vi~~s~~~~~t~~t~~yn~r~~e~~~A~ 271 (478)
T 2a2c_A 203 GTEGGGMDQSISFLAEEGTAKLIEFSP-----LRATDVKLPS------GAVFVIANSCVEMNKAATSHFNIRVMECRLAA 271 (478)
T ss_dssp TCCCCSHHHHHHHHCBTTBEEEEETTT-----TEEEEECCCT------TEEEEEEECCCCCCGGGSSHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHhccCCcEEEEEcCC-----CceEEecCCC------CcEEEEEeCCCcccccccchhHHHHHHHHHHH
Confidence 999999999999997 788887654 2567777764 4689999999887432
Q ss_pred HHHHHH----------------------------HHHHhhc---C-HH-----------------------------HHH
Q 002861 747 QVLQKV----------------------------VTRYLQR---D-NL-----------------------------LIS 765 (873)
Q Consensus 747 ~~l~~v----------------------------~~~~~~~---~-~~-----------------------------~~~ 765 (873)
++|++. ++.+... . .+ ..+
T Consensus 272 ~~L~~~~~~~~~~~~~l~d~~~~~~~~~~~~v~~v~~~~~~~~~~~~~i~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~r 351 (478)
T 2a2c_A 272 KLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQR 351 (478)
T ss_dssp HHHHHHTTCCTTTCCCHHHHHHHHTCCHHHHHHHHHHHSCSSCBCHHHHHHHHTCCHHHHHHHTSCGGGTTCCCBCHHHH
T ss_pred HHHHhhhcccccccchHHhhhhhhcccHHHHHHHHHHhcccccccHHHHHHHhCccHHHHHhhccccccccchhHHHHHH
Confidence 233321 0111110 0 00 001
Q ss_pred HHHHH--HHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEE
Q 002861 766 SIKRL--TELAKNGRDALMN---CDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALL 839 (873)
Q Consensus 766 ~~~~i--~~~~~~~~~AL~~---gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~ 839 (873)
..+-+ ...+.+++++|.+ +|++.||++|+++|++++.++ ++++|++++|++++++ |++|+||||||||||+++
T Consensus 352 a~h~~~e~~rv~~~~~aL~~~~~~d~~~lg~lm~~sh~slr~l~-~vs~peld~l~~~a~~~Ga~GarltGAG~GG~via 430 (478)
T 2a2c_A 352 AKHVYSEAARVLQFKKICEEAPENMVQLLGELMNQSHMSCRDMY-ECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVS 430 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHTS-CCCCHHHHHHHHHHHHTTCSEEEECTTCSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhcc-cCCCHHHHHHHHHHHhCCCcEEEeccCCCccEEEE
Confidence 11111 1235677889998 999999999999999999998 4899999999999987 999999999999999999
Q ss_pred EeCCcchHHHHHHHHHhc
Q 002861 840 LAKDAESATELRRMLEKD 857 (873)
Q Consensus 840 l~~~~~~a~~i~~~L~~~ 857 (873)
|+++ +.++++.+.|++.
T Consensus 431 Lv~~-~~~~~~~~~l~~~ 447 (478)
T 2a2c_A 431 MVPA-DKLPSFLANVHKA 447 (478)
T ss_dssp EEEG-GGHHHHHHHHHHH
T ss_pred EEcH-HHHHHHHHHHHHH
Confidence 9986 6677888777653
No 8
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7
Probab=100.00 E-value=8.1e-36 Score=340.89 Aligned_cols=316 Identities=17% Similarity=0.158 Sum_probs=234.8
Q ss_pred EEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCC--ceeeecCCCCCCCCCC
Q 002861 529 VKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGN--QLHIEDLTPIATPFDH 606 (873)
Q Consensus 529 v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~--~~~~~~l~~l~~p~~~ 606 (873)
++++|||||+|+|+|+|+. ||.+|++||+++++ ++++++++..+.+.+.... ......++++. +...
T Consensus 49 ~~~~APgkv~L~Geh~d~~------G~~~l~~aI~l~~~----v~v~~~~~~~i~i~~~~~~~~~~~~~~~~~~~-~~~~ 117 (419)
T 1pie_A 49 EYFFSPGRINLIGEHTDYN------GGYVFPASITIGTT----GLARLREDKKVKLYSENFPKLGVIEFDLDEVE-KKDG 117 (419)
T ss_dssp EEEEEEEEEEEECCSCTTT------TCEEEEEEEEEEEE----EEEEECSSSEEEEEETTCGGGCCEEEETTCTT-SCCT
T ss_pred EEEEeeEEEEEcccceeeC------CCEEEEEEEcccEE----EEEEECCCCEEEEEECCCCCcceeEEeccccc-CCCC
Confidence 7899999999999999985 88999999999987 7888877767777764321 11112233332 1122
Q ss_pred CChhHHHHHHHHHhhhhhhcccc-ccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH-
Q 002861 607 NDPFRLVKSALLVTGVIHEKLIE-SMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQL- 684 (873)
Q Consensus 607 ~~~~~~~kaal~~~~~~~~~~~~-~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~- 684 (873)
.+|.+|+++++..+.. .... ..|++|++.++||.|+|||||||+++|++.|+++++|.++++++|+++|..+|+.
T Consensus 118 ~~~~n~v~~~~~~l~~---~g~~~~~g~~i~i~s~IP~gaGLGSSaA~~vA~~~al~~l~g~~ls~~el~~la~~~E~~~ 194 (419)
T 1pie_A 118 ELWSNYVKGMIVMLKG---AGYEIDKGFELLIKGEIPTASGLSSSASLELLVGVVLDDLFNLNVPRLELVQLGQKTENDY 194 (419)
T ss_dssp TCTHHHHHHHHHHHHH---TTCCCCSCEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHH---hCCCCCCCEEEEEECCCCCCCChhHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHh
Confidence 5688999988776531 1122 3799999999999999999999999999999999999999999999999999985
Q ss_pred cCCCChhhhhHhhcccC---eeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHH---------------
Q 002861 685 MGTGGGWQDQIGGLYPG---IKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAH--------------- 746 (873)
Q Consensus 685 ~g~~~G~~Dq~~~~~GG---~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~--------------- 746 (873)
.|.++|+|||+++++|| ..++++.+. .+++++++. .++.++|++|+.+++|.
T Consensus 195 ~G~~~G~~D~~~~~~Gg~~~~~~~d~~~~-----~~~~l~~~~-----~~~~~vl~~~~~~~~t~~~~y~~r~~~~~~a~ 264 (419)
T 1pie_A 195 IGVNSGILDQFAIGFGEVKKAIELDCNTL-----KYEMVPVEL-----RDYDIVIMNTNKPRALTESKYNERFAETREAL 264 (419)
T ss_dssp TCCCCCSHHHHHHHHCBTTEEEEEETTTC-----CEEEEECCC-----TTEEEEEEECCCCCCTTCHHHHHHHHHHHHHH
T ss_pred cCCCccchhHHHHHhccCCeEEEeecCCC-----ceEEeecCC-----CCcEEEEEECCCccccccchHHHHHHHHHHHH
Confidence 69999999999999998 444443322 346666541 14689999999988764
Q ss_pred HHHHHH--HHHHhhcCHH-------------H-HHHHHHHHH--HHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCC
Q 002861 747 QVLQKV--VTRYLQRDNL-------------L-ISSIKRLTE--LAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCS 808 (873)
Q Consensus 747 ~~l~~v--~~~~~~~~~~-------------~-~~~~~~i~~--~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs 808 (873)
+++++. ++.+...++. . .+..+.+.+ .+.++.++|.++|++.||++|+++|..+++.+ +++
T Consensus 265 ~~l~~~~~v~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~v~e~~r~~~~~~al~~~d~~~lg~lm~~~~~~l~~~~-~~~ 343 (419)
T 1pie_A 265 KRMQTRLDIQSLGELSNEEFDANTDLIGDETLIKRARHAVYENNRTKIAQKAFVAGNLTKFGELLNASHASLKDDY-EVT 343 (419)
T ss_dssp HHHHHHCCCSSGGGCCHHHHHHTGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTS-CCC
T ss_pred HHHhhccccCchhhCCHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCC
Confidence 122210 0000011110 1 111222222 26678899999999999999999999888855 489
Q ss_pred hHHHHHHHHHHcc--CCceEEecCCCccceeEEEeCCcchHHHHHHHHHhc----CCCceEEEEEeec
Q 002861 809 NEFVDRLFAFADP--YCCGYKLVGAGGGGFALLLAKDAESATELRRMLEKD----SNFNSEVYNWNIY 870 (873)
Q Consensus 809 ~p~l~~l~~~a~~--ga~G~klsGAGgGG~v~~l~~~~~~a~~i~~~L~~~----~~~~v~v~~~~i~ 870 (873)
+|+++++++.+++ |++|+||||||||||+++|+++ +.++++.+.|++. .+....+|.+++.
T Consensus 344 ~p~l~~l~~~a~~~~Ga~ga~lsGaG~Gg~v~al~~~-~~a~~~~~~l~~~~~~~~g~~~~~~~~~~~ 410 (419)
T 1pie_A 344 GLELDTLAETAQKQAGVLGARMTGAGFGGCAIALVAH-DNVSAFRKAVGQVYEEVVGYPASFYVAQIG 410 (419)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEECSSCSSSEEEEEEEG-GGHHHHHHHHHHHHHHHHSSCCEEEECCBC
T ss_pred CHHHHHHHHHHHhcCCCceeeEecCCCCeEEEEEEch-hhHHHHHHHHHHHHHHhcCCCCeEEEEcCC
Confidence 9999999999985 8899999999999999999986 6677777777653 2455678877653
No 9
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7
Probab=100.00 E-value=2.1e-35 Score=335.33 Aligned_cols=316 Identities=18% Similarity=0.146 Sum_probs=235.2
Q ss_pred eEEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCce----eeecCCCCC--
Q 002861 528 TVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQL----HIEDLTPIA-- 601 (873)
Q Consensus 528 ~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~----~~~~l~~l~-- 601 (873)
.+.++|||||+|+|+|+|| |||.||++||+++++ ++++++++..+++.+...... ....++...
T Consensus 36 ~~~~~APgkv~L~Geh~Dy------~~~~~l~~ai~~~~~----v~v~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 105 (399)
T 1wuu_A 36 ELAVSAPGRVNLIGEHTDY------NQGLVLPMALELMTV----LVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRS 105 (399)
T ss_dssp SEEEEEEEEEEEECTTCGG------GTCEEEEEEEEEEEE----EEEEEETTCEEEEEECCSSSCSCSEEEEECCCSSCC
T ss_pred CEEEEeeeeEEEecccccc------CCCEEEeEEecccEE----EEEEECCCCeEEEEECCCCCccccceEEecCccccc
Confidence 3889999999999999997 499999999999987 778887777788876432210 001121100
Q ss_pred CCCCCCChhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 002861 602 TPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLL 681 (873)
Q Consensus 602 ~p~~~~~~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~ 681 (873)
.+....+|.+|+++++..+ . .....|++|++.|+||.|+|||||||+++|++.|+++++|.++++++|+++|..+
T Consensus 106 ~~~~~~~~~n~v~~a~~~l-~----~~~~~g~~i~i~s~IP~gaGLGSSaA~~vA~~~al~~l~~~~l~~~~l~~la~~~ 180 (399)
T 1wuu_A 106 LEPGTPRWANYVKGVIQYY-P----AAPLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQA 180 (399)
T ss_dssp CCCCSSGGGHHHHHHHHHC-S----SSCCCEEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHSCCCSCHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHh-c----CCCCCCeEEEEECCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 1112345889999988765 1 1223689999999999999999999999999999999999999999999999999
Q ss_pred HH-HcCCCChhhhhHhhcccCe---eEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHH-HH-------
Q 002861 682 EQ-LMGTGGGWQDQIGGLYPGI---KFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQ-VL------- 749 (873)
Q Consensus 682 E~-~~g~~~G~~Dq~~~~~GG~---~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~-~l------- 749 (873)
|+ +.|.++|+|||+++++||. .++++.+. .+++++++. .++.++|++|+.+++|.. .+
T Consensus 181 E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~-----~~~~~~~~~-----~~~~~vl~~~~~~~~t~~~~y~~r~~~~ 250 (399)
T 1wuu_A 181 EHSFAGMPCGIMDQFISLMGQKGHALLIDCRSL-----ETSLVPLSD-----PKLAVLITNSNVRHSLASSEYPVRRRQC 250 (399)
T ss_dssp HHHHTCCCCCSHHHHHHHHCCTTEEEEEETTTC-----CEEEEECCC-----SSEEEEEEEEEEEC--CTTTHHHHHHHH
T ss_pred HHHhcCCCCccHHHHHHHhccCCeEEEEecCCC-----ceEEecCCC-----CCeEEEEEECCCccccccccHHHHHHHH
Confidence 98 5799999999999999994 44443322 345665542 257899999999888742 11
Q ss_pred HHHHHHHh-----hc------------CHH-HHHHHHHHHHH--HHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCCh
Q 002861 750 QKVVTRYL-----QR------------DNL-LISSIKRLTEL--AKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSN 809 (873)
Q Consensus 750 ~~v~~~~~-----~~------------~~~-~~~~~~~i~~~--~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~ 809 (873)
....+.+. .. ++. ..+..+.+.+. +.++.++|.++|++.||++|+++|..+++.. ++++
T Consensus 251 ~~a~~~l~~~~l~~~~~~~~~~~~~~l~~~~~~r~~~~~~e~~r~~~~~~al~~~d~~~lg~~m~~~h~~l~~~~-~~~~ 329 (399)
T 1wuu_A 251 EEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVGEIRRTAQAAAALRRGDYRAFGRLMVESHRSLRDDY-EVSC 329 (399)
T ss_dssp HHHHHHTTCSSTTSCCHHHHTTGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTS-CCCC
T ss_pred HHHHHHhChhhhhcCCHHHHHHHHhhcCHHHHHHHHHHHhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 11111110 00 111 11223333333 6678899999999999999999988877644 4889
Q ss_pred HHHHHHHHHHcc--CCceEEecCCCccceeEEEeCCcchHHHHHHHHHhcCCCceEEEEEeec
Q 002861 810 EFVDRLFAFADP--YCCGYKLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNIY 870 (873)
Q Consensus 810 p~l~~l~~~a~~--ga~G~klsGAGgGG~v~~l~~~~~~a~~i~~~L~~~~~~~v~v~~~~i~ 870 (873)
|+++++++.+++ |++|+|+||||+|||+++|+++ +.++++.+.|++..+....+|.++++
T Consensus 330 p~l~~l~~~a~~~~Ga~ga~~sGaG~Gg~v~~l~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~ 391 (399)
T 1wuu_A 330 PELDQLVEAALAVPGVYGSRMTGGGFGGCTVTLLEA-SAAPHAMRHIQEHYGGTATFYLSQAA 391 (399)
T ss_dssp HHHHHHHHHHHTSTTEEEEEECSSCSEEEEEEEEEG-GGHHHHHHHHHHHCSSCCEEEEECCC
T ss_pred HHHHHHHHHHHhcCCceEEeeecCCCccEEEEEEcc-chHHHHHHHHHHHhCCCCcEEEEcCC
Confidence 999999999986 7899999999999999999986 67889999998876666778877654
No 10
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A
Probab=100.00 E-value=2.9e-35 Score=333.85 Aligned_cols=313 Identities=18% Similarity=0.217 Sum_probs=225.8
Q ss_pred eEEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCC------
Q 002861 528 TVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIA------ 601 (873)
Q Consensus 528 ~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~------ 601 (873)
.+.++|||||+|+|||+||. ||.|+++||+++++ +.++++++..+++.+.+.......+++++.
T Consensus 5 ~~~~~APgrv~L~Geh~d~~------g~~~l~~ai~~~~~----v~v~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 74 (395)
T 1kvk_A 5 VLLVSAPGKVILHGEHAVVH------GKVALAVALNLRTF----LVLRPQSNGKVSLNLPNVGIKQVWDVATLQLLDTGF 74 (395)
T ss_dssp CEEEEEEEEEEEECTTGGGG------TCCEEEEEEEEEEE----EEEEECSSSEEEEEETTTTEEEEEEHHHHHTSCC--
T ss_pred cEEEEeCeEEEEecCCeeeE------CCEeeeeEeeccEE----EEEEECCCCeEEEEcCCCCceEEEEhHhhhhhhccc
Confidence 48899999999999999985 99999999999987 788888777888775433211111111110
Q ss_pred -CCC-----------------CCCChhHH-----HHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHH
Q 002861 602 -TPF-----------------DHNDPFRL-----VKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVV 658 (873)
Q Consensus 602 -~p~-----------------~~~~~~~~-----~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l 658 (873)
.+. ...+|.+| +++++..+...........|++|++.++||.|+|||||||+++|++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~~~~~~~~~~~~g~~i~i~s~iP~g~GLGSSaA~~va~~ 154 (395)
T 1kvk_A 75 LEQGDVPAPTLEQLEKLKKVAGLPRDCVGNEGLSLLAFLYLYLAICRKQRTLPSLDIMVWSELPPGAGLGSSAAYSVCVA 154 (395)
T ss_dssp --------------CHHHHHHTSSCCCSCTTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEESSCTTSSSCHHHHHHHHHH
T ss_pred ccccccccccHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHhccccCCCCEEEEEEecCCCCCCccHHHHHHHHHH
Confidence 000 01145555 3444332211000001146999999999999999999999999999
Q ss_pred HHHHHHhCC-----CCC-------H---HHHHHHHHHHHH-HcCCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecC
Q 002861 659 KALLQITDG-----DQS-------N---ENVARLVLLLEQ-LMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLA 722 (873)
Q Consensus 659 ~Al~~~~g~-----~ls-------~---~eL~~la~~~E~-~~g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~ 722 (873)
.|++++++. +++ + .+|+++|..+|+ +.|.++|+ ||+++++||+.+++ ++ .++|++.
T Consensus 155 ~al~~l~~~~~~~~~l~~~~~~~~~~~l~~l~~~A~~~E~~~~G~~sG~-D~~~~~~Gg~~~~~--~~-----~~~~l~~ 226 (395)
T 1kvk_A 155 AALLTACEEVTNPLKDRGSIGSWPEEDLKSINKWAYEGERVIHGNPSGV-DNSVSTWGGALRYQ--QG-----KMSSLKR 226 (395)
T ss_dssp HHHHHHTTSSCCGGGGCCSEECCCHHHHHHHHHHHHHHHHHHHSSCCSH-HHHHHHHCSEEEES--SS-----CEEECSC
T ss_pred HHHHHHhCcccccccccccccccchhhHHHHHHHHHHhhheEecCCCCc-chHHhhhcceEEEc--CC-----CceeccC
Confidence 999999999 788 7 556677899998 56999999 99999999998863 33 3467764
Q ss_pred ChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH-------hccCHHHHHHHHHH
Q 002861 723 SPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDAL-------MNCDVDELGKIMLE 795 (873)
Q Consensus 723 ~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~AL-------~~gd~~~lg~lm~~ 795 (873)
++ +.+++|++|+.+++|+++++.+.+.....+..+...++++.+++.++..++ .++|++.|+++|++
T Consensus 227 ~~------~~~~vl~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~al~~~d~~~lg~lm~~ 300 (395)
T 1kvk_A 227 LP------ALQILLTNTKVPRSTKALVAGVRSRLIKFPEIMAPLLTSIDAISLECERVLGEMAAAPVPEQYLVLEELMDM 300 (395)
T ss_dssp CC------CEEEEEEECCCCCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred CC------CcEEEEEECCCCCchHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHH
Confidence 43 568999999999999998776543321121212224455555555555544 45899999999999
Q ss_pred HHHHHhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEEEeCCcc---hHHHHHHHHHhcCCCceEEEEEeec
Q 002861 796 AWRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALLLAKDAE---SATELRRMLEKDSNFNSEVYNWNIY 870 (873)
Q Consensus 796 ~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~l~~~~~---~a~~i~~~L~~~~~~~v~v~~~~i~ 870 (873)
+|..++++ ++++|+++++++.+++ |+ |+||||||||||+++|+++.. .++++.+.+++. ...+|.+++.
T Consensus 301 ~~~~l~~~--~~~~p~l~~l~~~a~~~Ga-ga~~sGaG~Gg~v~~l~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~ 373 (395)
T 1kvk_A 301 NQHHLNAL--GVGHASLDQLCQVTAAHGL-HSKLTGAGGGGCGITLLKPGLERAKVEAAKQALTGC---GFDCWETSIG 373 (395)
T ss_dssp HHHHHHHH--TCCCHHHHHHHHHHHHTTC-EEEECSSCSSSEEEEEECTTCCHHHHHHHHHHHHHT---TCEEEEEEES
T ss_pred HHHHHHHc--CCCCHHHHHHHHHHHHcCC-ceeeccCCCCCEEEEEecCCCCHHHHHHHHHHHHHc---CCEEEEEecC
Confidence 99988875 4899999999999987 78 999999999999999998632 345666777664 2346776654
No 11
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A*
Probab=100.00 E-value=4.4e-34 Score=316.50 Aligned_cols=308 Identities=20% Similarity=0.211 Sum_probs=229.6
Q ss_pred EEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEec-CCcEEEEeCCCCceeeecCCCCCCCCCCC
Q 002861 529 VKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTK-MSGVLISDDAGNQLHIEDLTPIATPFDHN 607 (873)
Q Consensus 529 v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~-~~~i~i~~~~~~~~~~~~l~~l~~p~~~~ 607 (873)
++++|||||+|+|+|.|+. ||.++++||+++.+ +++++.+ +..+.+.+... .+ |....
T Consensus 14 ~~~~ApgKi~L~Geh~~~~------G~~~l~~ai~~~~~----v~v~~~~~~~~~~~~~~~~---------~~--~~~~~ 72 (332)
T 2hfs_A 14 GKNIGYGKVILFGEHFVVH------GAEAIVAGISEYTE----CRLEINPGVPGLQVDDQRP---------AI--PGYIA 72 (332)
T ss_dssp SCCEEEEEEEEECTTGGGG------TCCEEEEEEEEEEE----EEEEEETTCCSEEEEECCC---------CC--TTHHH
T ss_pred EEEEEeEEEEEecCCEEEc------CCeEEEEEecccEE----EEEEEcCCCCCeEEEecCc---------cc--ccccc
Confidence 6789999999999999985 99999999999987 6777763 34455432210 11 10000
Q ss_pred ChhHH-HHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH-c
Q 002861 608 DPFRL-VKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQL-M 685 (873)
Q Consensus 608 ~~~~~-~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~-~ 685 (873)
+..+. .+++...+.... ......|++|++.++||.|+|||||||+++|++.|++++++.++++++|+++|..+|+. .
T Consensus 73 ~~~~~~~~a~~~~~~~~g-~~~~~~g~~i~i~~~iP~g~GLGSSsA~~~a~~~al~~l~~~~l~~~~l~~~a~~~E~~~~ 151 (332)
T 2hfs_A 73 QKRDEQIKAHQLVLDHLK-VDLSGDGLKMFIGGPLVPSSGIGASASDVVAFSRALSELYQLNLTDEEVNLSAFVGEGGYH 151 (332)
T ss_dssp HHHHHHHHHHHHHHHHTT-BCCSSSEEEEEEECSCCCCTTSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHGGGSS
T ss_pred ccchhHHHHHHHHHHHcC-CccCCCceEEEEEcCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhc
Confidence 11222 233222221100 00012689999999999999999999999999999999999999999999999999985 5
Q ss_pred CCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcCHHHHH
Q 002861 686 GTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLIS 765 (873)
Q Consensus 686 g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~~~~~~ 765 (873)
|.++|. |++++++||+..+....+. ..++++++++ +++++|++|+.+++|+++++++.......++.+..
T Consensus 152 G~~~G~-D~~~~~~Gg~~~~~~~~g~---~~~~~~~~~~------~~~~vl~~~~~~~~T~~~~~~~~~~~~~~~~~~~~ 221 (332)
T 2hfs_A 152 GTPSGA-DNTAATYGGLILYRRQNGK---SVFKPIAFQQ------RLYLVVVGTGINASTAKVVNDVHKMKQQQPVQFKR 221 (332)
T ss_dssp SCCCSH-HHHHHHHCEEEEEEECSSS---EEEEEECCCS------CEEEEEEECSCCCCHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCCcH-hHHHHhcCCeEEEecCCCC---cceeeecCCC------CcEEEEEECCCCccHHHHHHHHHHHHHhCHHHHHH
Confidence 789998 9999999999877644432 3467776653 56899999999999999998764332222222222
Q ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEEEeCCc
Q 002861 766 SIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALLLAKDA 844 (873)
Q Consensus 766 ~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~l~~~~ 844 (873)
.++++.+.+.++.++|.++|++.|+++|+++|..++.+. +++|+++++++.+++ |++|+++||||+|||+++|+++.
T Consensus 222 ~~~~~~~~~~~~~~al~~~d~~~l~~~~~~~~~~l~~~~--~~~p~l~~l~~~~~~~Ga~ga~~sGaG~gg~v~~l~~~~ 299 (332)
T 2hfs_A 222 LYDNYTHIVSQAREALQKGDLQRLGQLMNANHDLCRQID--VSCRELESIVQTCRTYGALGAKLSGTGRGGIAVALAASS 299 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT--CCCHHHHHHHHHHHHTTCSEEEEESSCSSSEEEEEESSH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHcCCceEEeccCCCCcEEEEEecCc
Confidence 455555677888999999999999999999988888864 789999999999987 89999999999999999999975
Q ss_pred chHHHHHHHHHhcCCCceEEEEEeec
Q 002861 845 ESATELRRMLEKDSNFNSEVYNWNIY 870 (873)
Q Consensus 845 ~~a~~i~~~L~~~~~~~v~v~~~~i~ 870 (873)
+.++++.+.|++.......+|.+.+.
T Consensus 300 ~~a~~~~~~l~~~~~~~~~~~~~~~~ 325 (332)
T 2hfs_A 300 DQRDAIVKGLKAKCPEAKFIWRYTVQ 325 (332)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEEEC
T ss_pred ccHHHHHHHHHHHHhcCCceEEEEec
Confidence 56788999988753222235555443
No 12
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A*
Probab=100.00 E-value=1.1e-33 Score=315.36 Aligned_cols=311 Identities=21% Similarity=0.168 Sum_probs=226.2
Q ss_pred EEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCCCCCC
Q 002861 529 VKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHND 608 (873)
Q Consensus 529 v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~~~~~ 608 (873)
++++|||||+|+|+|+|+ |||.++++||+++++ +++++.++..+++.+.... ...++ +..| ..+.
T Consensus 2 ~~~~aP~ki~L~Ge~~d~------~~~~~l~~ai~~~~~----v~v~~~~~~~i~i~~~~~~--~~~~~--l~~~-~~~~ 66 (350)
T 2cz9_A 2 IKVKSPGRVNLIGEHTDY------TYGYVMPMAINLYTK----IEAEKHGEVILYSEHFGEE--RKFSL--NDLR-KENS 66 (350)
T ss_dssp EEEEEEEEEEEECTTCGG------GTCEEEEEEEEEEEE----EEEEEESSEEEEETTTTEE--EEECT--TCCC-CCSS
T ss_pred eEEEeccEEEEeecChhh------CCCEEEEEEeeceEE----EEEEECCCCeEEEEECCCC--ccccc--cCCC-CCCc
Confidence 678999999999999997 499999999999987 7787776555666432211 00110 1112 2245
Q ss_pred hhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH-cCC
Q 002861 609 PFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQL-MGT 687 (873)
Q Consensus 609 ~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~-~g~ 687 (873)
|.+++++++..+.. ......|++|++.++||.|+|||||||+++|++.|+++++|.++++++|+++|..+|.. .|.
T Consensus 67 ~~~~~~~~~~~l~~---~~~~~~g~~i~i~s~IP~g~GLGSSaA~~vA~~~al~~l~~~~l~~~el~~la~~~e~~~~g~ 143 (350)
T 2cz9_A 67 WIDYVKGIFWVLKE---SDYEVGGIKGRVSGNLPLGAGLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGV 143 (350)
T ss_dssp THHHHHHHHHHHHH---TTCCCCEEEEEEECSCCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHh---cCCCCCCeEEEEECCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCC
Confidence 78899888765531 12234689999999999999999999999999999999999999999999999999985 689
Q ss_pred CChhhhhHhhcccCe---eEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHH-HHHHHHH-------HH
Q 002861 688 GGGWQDQIGGLYPGI---KFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQ-VLQKVVT-------RY 756 (873)
Q Consensus 688 ~~G~~Dq~~~~~GG~---~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~-~l~~v~~-------~~ 756 (873)
++|++|++++.+||. .++++.+. .++++++++ +++++|++|+.++.+.. .+...+. .+
T Consensus 144 ~~gi~d~~~~~~g~~~~~~~~d~~~~-----~~~~l~~~~------~~~~vl~~~~~~~~~~t~~~~~r~~~~~~a~~~~ 212 (350)
T 2cz9_A 144 PCGILDQFAVVFGREGNVIFLDTHTL-----DYEYIPFPK------DVSILVFYTGVRRELASSEYAERKHIAEESLKIL 212 (350)
T ss_dssp CCCSHHHHHHHHCCTTEEEEEETTTC-----CEEEEECCT------TEEEEEEECSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CccchhHHHHHhcCCCeEEEEecCCC-----cEEEEcCCC------CcEEEEEECCCCCccccchHHHHHHHHHHHHHHh
Confidence 999999999999863 44443221 356776653 56899999998854321 1221110 00
Q ss_pred -----h--------hcCHHHH-HHHHHHHH--HHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHc
Q 002861 757 -----L--------QRDNLLI-SSIKRLTE--LAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFAD 820 (873)
Q Consensus 757 -----~--------~~~~~~~-~~~~~i~~--~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~ 820 (873)
. .-++.+. +..+.+.+ .+.++.++|.++|++.|+++|+++|..+++.+ ++++|+++++++.++
T Consensus 213 ~~~~lr~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~d~~~lg~~~~~~~~~l~~~~-~~~~p~l~~l~~~~~ 291 (350)
T 2cz9_A 213 GKGSSKEVREGELSKLPPLHRKFFGYIVRENARVLEVRDALKEGNVEEVGKILTTAHWDLAKNY-EVSCKELDFFVERAL 291 (350)
T ss_dssp TCSCGGGCCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHH
T ss_pred ChhhhhhCCHHHHhhCCHHHHHHHHHHhhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHH
Confidence 0 0122111 11122222 26678899999999999999999998877744 378999999999998
Q ss_pred c-CCceEEecCCCccceeEEEeCCcchHHHHHHHHHh----cCCCceEEEEEeec
Q 002861 821 P-YCCGYKLVGAGGGGFALLLAKDAESATELRRMLEK----DSNFNSEVYNWNIY 870 (873)
Q Consensus 821 ~-ga~G~klsGAGgGG~v~~l~~~~~~a~~i~~~L~~----~~~~~v~v~~~~i~ 870 (873)
+ |++|+|+||||+|||+++|+++ +.++++.+.|++ .+++..++|.++++
T Consensus 292 ~~Ga~ga~lsGaG~G~~v~~l~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 345 (350)
T 2cz9_A 292 KLGAYGARLTGAGFGGSAIALVDK-EDAETIGEEILREYLKRFPWKARHFIVEPS 345 (350)
T ss_dssp HTTCSEEEECSSCSSSEEEEEEEG-GGHHHHHHHHHHHHHHHCCSCCEEEEECEE
T ss_pred HcCCCEEEEecCCCceEEEEEEch-hhHHHHHHHHHHHHHHhhCCCCcEEEecCC
Confidence 7 8999999999999999999986 456666666654 33567888888774
No 13
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus}
Probab=100.00 E-value=6.2e-34 Score=312.03 Aligned_cols=299 Identities=21% Similarity=0.218 Sum_probs=228.5
Q ss_pred CeEEEEeceEEEeecccccCCCcccCCCCeEEEeeeecc-cccceeEEEEEecCCc-EEEEeCCCCceeeecCCCCCCCC
Q 002861 527 RTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLE-SSLPIGTIIETTKMSG-VLISDDAGNQLHIEDLTPIATPF 604 (873)
Q Consensus 527 ~~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~-~~~pi~~~v~~~~~~~-i~i~~~~~~~~~~~~l~~l~~p~ 604 (873)
+.++++|||||+|+|+|+||+ |+.+++++|+++ ++ ++++++++.. +.+.+.... .++ +
T Consensus 5 ~~~~~~APgkinL~Ge~~d~~------g~~~l~~ai~~~~~~----v~v~~~~~~~~i~~~~~~~~-------~~~--~- 64 (308)
T 2x7i_A 5 RKGYGESTGKIILIGEHAVTF------GEPAIAVPFNAGKIK----VLIEALESGNYSSIKSDVYD-------GML--Y- 64 (308)
T ss_dssp CEEEEEEEEEEEEEEBTTCCT------TSCEEEEEEEEEEEE----EEEEECCTTCCCEEEEEECS-------SCC--C-
T ss_pred cceEEEEeeEEEEEecCeeec------CCeEEEEEEcCCEEE----EEEEECCCCCeeEEEecCCC-------CCh--h-
Confidence 358899999999999999985 889999999985 65 7787776544 555432110 011 1
Q ss_pred CCCChhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH-
Q 002861 605 DHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQ- 683 (873)
Q Consensus 605 ~~~~~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~- 683 (873)
...+|.++++.++..+.. . ..|++|++.++||.|+|||||||+++|++.|++++++.++++++|+++|..+|+
T Consensus 65 ~~~~~~~~v~~~~~~~~~---~---~~g~~i~i~~~iP~g~GLGSSsa~~~a~~~al~~l~~~~l~~~~l~~la~~~E~~ 138 (308)
T 2x7i_A 65 DAPDHLKSLVNRFVELNN---I---TEPLAVTIQTNLPPSRGLGSSAAVAVAFVRASYDFLGKSLTKEELIEKANWAEQI 138 (308)
T ss_dssp CTTSCHHHHHHHHHHHTT---C---CSCEEEEEEECCCTTSSSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHh---h---CCCeEEEEeccCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 112577888888765421 1 248999999999999999999999999999999999999999999999999998
Q ss_pred HcCCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcCHHH
Q 002861 684 LMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLL 763 (873)
Q Consensus 684 ~~g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~~~~ 763 (873)
..|.++|. |+.++.+||..+++ .+. .+++++.+ ++..+++++++.+++|+++++.+.+... ..+..
T Consensus 139 ~~g~~sG~-d~~~~~~g~~~~~~--~g~----~~~~~~~~------~~~~~vi~~~~~~~sT~~~~~~l~~~~~-~~~~~ 204 (308)
T 2x7i_A 139 AHGKPSGI-DTQTIVSGKPVWFQ--KGH----AETLKTLS------LDGYMVVIDTGVKGSTRQAVHDVHKLCE-DPQYM 204 (308)
T ss_dssp HHSSCCHH-HHHHHHHTSCEEEE--TTE----EEECSCCC------BSSEEEEEECCC--CCSCCCC---------CCHH
T ss_pred HCCCCchH-HHHHhhCCceEEEE--cCC----CceEeccC------CCceEEEEECcCCCCHHHHHHHHHHHHh-cCchH
Confidence 46889998 78888899988766 332 35666543 2578999999988877765443322211 12222
Q ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEEEeC
Q 002861 764 ISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALLLAK 842 (873)
Q Consensus 764 ~~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~l~~ 842 (873)
.+ +.++.+++.++.++|.++|++.|+++|+++|+.++++ ++++|+++++++.+++ |++|+++||||+|||+++|++
T Consensus 205 ~~-~~~~~~~~~~~~~al~~~d~~~l~~~~~~~~~~~~~~--~~~~p~l~~l~~~~~~~Ga~ga~~sGaG~GG~v~~l~~ 281 (308)
T 2x7i_A 205 SH-VKHIGKLVLRASDVIEHHKFEALADIFNECHADLKAL--TVSHDKIEQLMKIGKENGAIAGKLTGAGRGGSMLLLAK 281 (308)
T ss_dssp HH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--SCCCHHHHHHHHHHHHTTCSEEEESBTTTCSSEEEEES
T ss_pred HH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHCCCcEEEeeccCCCcEEEEEeC
Confidence 23 5556667778899999999999999999999988886 4789999999999987 899999999999999999999
Q ss_pred CcchHHHHHHHHHhcCCCceEEEEEeec
Q 002861 843 DAESATELRRMLEKDSNFNSEVYNWNIY 870 (873)
Q Consensus 843 ~~~~a~~i~~~L~~~~~~~v~v~~~~i~ 870 (873)
+++.++++.+.|++.+ ..++|..+++
T Consensus 282 ~~~~~~~~~~~l~~~~--~~~~~~~~~~ 307 (308)
T 2x7i_A 282 DLPTAKNIVKAVEKAG--AAHTWIENLG 307 (308)
T ss_dssp SHHHHHHHHHHHHHTT--CSEEEEEECB
T ss_pred ChhHHHHHHHHHHhCC--CceEeeEeCC
Confidence 7567889999998863 3456666553
No 14
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A
Probab=100.00 E-value=5.6e-33 Score=305.67 Aligned_cols=308 Identities=21% Similarity=0.295 Sum_probs=224.6
Q ss_pred CCeEEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCCC
Q 002861 526 PRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFD 605 (873)
Q Consensus 526 ~~~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~~ 605 (873)
+..++++|||||+|+|+|+|+. |+.++++||+++.+ +++++.++..+++...........++++. .+.+
T Consensus 3 ~~~~~~~APgki~L~geh~~~~------G~~~l~~ai~~~~~----v~v~~~~~~~i~i~~~~~~~~~~~~~~~~-~~~~ 71 (317)
T 1kkh_A 3 GSHMIIETPSKVILFGEHAVVY------GYRAISMAIDLTST----IEIKETQEDEIILNLNDLNKSLGLNLNEI-KNIN 71 (317)
T ss_dssp TCCEEEEEEEEEEEECTTGGGG------TCCEEEEEEEEEEE----EEEEECCSSEEEEEETTTTEEEEEETTTG-GGCC
T ss_pred CCCEEEEccEEEEEEcCCeeEc------CCEEEEEEecCeEE----EEEEECCCCeEEEEeCCCCCceEEEeccC-CccC
Confidence 4568999999999999999985 77799999999987 77887766667776543221111121111 1222
Q ss_pred CCChhHHHHHHHHHhhhhhh--ccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 002861 606 HNDPFRLVKSALLVTGVIHE--KLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQ 683 (873)
Q Consensus 606 ~~~~~~~~kaal~~~~~~~~--~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~ 683 (873)
..+| ++++.++..+..... ......|++|++.++||.|+|||||||+++|++.|++++++.++++++|+++|..+|.
T Consensus 72 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~~~iP~~~GLGsSsa~~~a~~~al~~l~~~~l~~~~l~~~a~~~E~ 150 (317)
T 1kkh_A 72 PNNF-GDFKYCLCAIKNTLDYLNIEPKTGFKINISSKIPISCGLGSSASITIGTIKAVSGFYNKELKDDEIAKLGYMVEK 150 (317)
T ss_dssp GGGS-GGGHHHHHHHHHHHHHTTCCCCSCEEEEEEECSCSSSSSCHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred cccc-hHHHHHHHHHHHHHHhhcccCCCCeEEEEecCCCCCCCchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 2234 445544443321000 0012469999999999999999999999999999999999999999999999999999
Q ss_pred H-cCCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCC--hhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcC
Q 002861 684 L-MGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLAS--PQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRD 760 (873)
Q Consensus 684 ~-~g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~--~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~ 760 (873)
. .|+++| +|++++++||+.+++ ++ .+++++.+ +.+ ...+.++|++|+.+++|.++++.+... .+
T Consensus 151 ~~~g~~sg-~D~~~~~~Gg~~~~~--~~-----~~~~~~~~~~~~l--~~~~~~vl~~~~~~~~T~~~~~~~~~~---~~ 217 (317)
T 1kkh_A 151 EIQGKASI-TDTSTITYKGILEIK--NN-----KFRKIKGEFEEFL--KNCKFLIVYAEKRKKKTAELVNEVAKI---EN 217 (317)
T ss_dssp HHSSSCCS-HHHHHHHHCSEEEES--SS-----CEEEECHHHHHHH--HTCCEEEEEEECCCSCHHHHHHHHHTC---TT
T ss_pred HhcCCCch-HHHHHHHhCCeEEEc--CC-----CceEecCCccccc--ccCcEEEEEECCCcCcHHHHHHHHHHh---hc
Confidence 5 466666 799999999998772 22 24555432 111 012589999999999999987764221 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEE
Q 002861 761 NLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALL 839 (873)
Q Consensus 761 ~~~~~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~ 839 (873)
. ...+.++ ...+.+++..+|++.|+++|+++|..++++ ++++|+++++++.+++ | +|+|+||||+|||+++
T Consensus 218 ~--~~~~~~~---~~~~~~a~~~~d~~~l~~~~~~~~~~~~~~--~~~~p~l~~~~~~~~~~G-~ga~~sGaG~GG~v~~ 289 (317)
T 1kkh_A 218 K--DEIFKEI---DKVIDEALKIKNKEDFGKLMTKNHELLKKL--NISTPKLDRIVDIGNRFG-FGAKLTGAGGGGCVII 289 (317)
T ss_dssp H--HHHHHHH---HHHHHHHHHCCSHHHHHHHHHHHHHHHHTT--TCCCHHHHHHHHHHHHHS-SEEEECSSSSSEEEEE
T ss_pred c--HHHHHHH---HHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHhcC-ceeEEeecCCCCEEEE
Confidence 1 1112222 233567888899999999999998888876 4889999999999987 7 9999999999999999
Q ss_pred EeCCcchHHHHHHHHHhcCCCceEEEEEeec
Q 002861 840 LAKDAESATELRRMLEKDSNFNSEVYNWNIY 870 (873)
Q Consensus 840 l~~~~~~a~~i~~~L~~~~~~~v~v~~~~i~ 870 (873)
++++ +.++++.+.|++. ..++|.++++
T Consensus 290 l~~~-~~~~~~~~~l~~~---g~~~~~~~~~ 316 (317)
T 1kkh_A 290 LVNE-EKEKELLKELNKE---DVRIFNCRMM 316 (317)
T ss_dssp ECCG-GGHHHHHHHHHTS---SCEEEEECBC
T ss_pred Eech-hhHHHHHHHHHhc---CCEEEEEEec
Confidence 9986 4488999999875 3456766653
No 15
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae}
Probab=100.00 E-value=8.6e-32 Score=292.46 Aligned_cols=276 Identities=20% Similarity=0.197 Sum_probs=210.8
Q ss_pred eEEEEeceEEEeecccccCCCcccCCCCeEEEeee-ecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCCCC
Q 002861 528 TVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAI-SLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDH 606 (873)
Q Consensus 528 ~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI-~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~~~ 606 (873)
.++++|||||+|+|+|.|++ |+.++++|| +++.+ +++++.+ ..+.+.+.
T Consensus 5 ~~~~~aP~ki~L~Ge~~~~~------g~~~l~~ai~~~~~~----v~v~~~~-~~~~i~~~------------------- 54 (292)
T 2oi2_A 5 VGVGQAHSKIILIGEHAVVY------GYPAISLPLLEVEVT----CKVVPAE-SPWRLYEE------------------- 54 (292)
T ss_dssp CEEEEEEEEEEEECTTGGGG------TCCEEEEEEEEEEEE----EEEEECS-SCCCCCCC-------------------
T ss_pred cEEEEeeeEEEEEeCCeeec------CCcEEEEEEcCcEEE----EEEEECC-CceEEEec-------------------
Confidence 37899999999999999974 889999999 99987 6776642 22211100
Q ss_pred CChhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH-c
Q 002861 607 NDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQL-M 685 (873)
Q Consensus 607 ~~~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~-~ 685 (873)
...+++..+...+. .....|++|++.++||.|+|||||||+++|++.|+++++|.++++++|+++|..+|+. .
T Consensus 55 -~~~~~~~~~~~~~~-----~~~~~g~~i~i~~~iP~g~GLGSSsa~~~a~~~al~~~~~~~l~~~~l~~la~~~E~~~~ 128 (292)
T 2oi2_A 55 -DTLSMAVYASLEYL-----NITEACIRCEIDSAIPEKRGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNRAEMIAH 128 (292)
T ss_dssp -SHHHHHHHHHHHHH-----TCSCCCEEEEEC----CCGGGSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHTT
T ss_pred -CccchhhhhhHHHh-----cccCCceEEEEEecCCCCCCchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhc
Confidence 01122222222211 1124689999999999999999999999999999999999999999999999999983 5
Q ss_pred CCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcCHHHHH
Q 002861 686 GTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLIS 765 (873)
Q Consensus 686 g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~~~~~~ 765 (873)
+.++|+ |++++++||+.++. .+. .+++++++ +...+++++++.+++|+++++.+.+... .. .+
T Consensus 129 ~~p~g~-d~~~~~~gg~~~~~--~~~----~~~~~~~~------~~~~~~i~~~~~~~sT~~~~~~l~~~~~-~~---~~ 191 (292)
T 2oi2_A 129 MNPSGL-DAKTCLSDQPIRFI--KNV----GFTELEMD------LSAYLVIADTGVYGHTREAIQVVQNKGK-DA---LP 191 (292)
T ss_dssp CCCCSH-HHHHHTCSSCEEEE--TTT----EEEECCCC------CSCEEEEEECSSCCCHHHHHHHHHHTGG-GG---HH
T ss_pred CCCCch-hHHHHhcCceEEEE--cCC----CceeecCC------CCCEEEEEECCCCCcHHHHHHHHHHHHh-hh---HH
Confidence 889997 99999999998773 232 24565542 1234889999999999988765432211 10 23
Q ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEEEeCCc
Q 002861 766 SIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALLLAKDA 844 (873)
Q Consensus 766 ~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~l~~~~ 844 (873)
.++.+.+++.++.++|.++|++.|+++|+++|..++.+ ++++|+++++++.+++ |++|+++||||+|||+++|++++
T Consensus 192 ~~~~~~~~~~~~~~al~~~d~~~l~~~~~~~~~~l~~~--~~~~p~l~~l~~~~~~~Ga~ga~~sGaG~Gg~v~~l~~~~ 269 (292)
T 2oi2_A 192 FLHALGELTQQAEIAISQKDAEGLGQILSQAHLHLKEI--GVSSLEADSLVETALSHGALGAKMSGGGLGGCIIALVTNL 269 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCCCHHHHHHHHHHHTTTCSEEEEESSSSSSEEEEEESCH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHhCCCceeeeccCCCCcEEEEEecCc
Confidence 45566666778899999999999999999999887775 4789999999999987 88999999999999999999976
Q ss_pred chHHHHHHHHHhcC
Q 002861 845 ESATELRRMLEKDS 858 (873)
Q Consensus 845 ~~a~~i~~~L~~~~ 858 (873)
+.++++.+.|++.+
T Consensus 270 ~~~~~~~~~l~~~~ 283 (292)
T 2oi2_A 270 THAQELAERLEEKG 283 (292)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhcC
Confidence 67889999998863
No 16
>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} SCOP: d.14.1.5 d.58.26.1 PDB: 1fwl_A 1fwk_A* 1h73_A* 1h74_A*
Probab=99.95 E-value=5.1e-27 Score=255.50 Aligned_cols=277 Identities=15% Similarity=0.152 Sum_probs=203.8
Q ss_pred eEEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCCCCC
Q 002861 528 TVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHN 607 (873)
Q Consensus 528 ~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~~~~ 607 (873)
.++++||+|++++|+++|. +++|++.|.+. +.+++.++..+.+..+. .++ |. +
T Consensus 2 ~i~v~aPaki~nlG~g~~v-----------l~~a~d~~~~~---~~~~~~~~~~~~i~~~~---------~~~--~~--~ 54 (296)
T 1h72_C 2 KVRVKAPCTSANLGVGFDV-----------FGLCLKEPYDV---IEVEAIDDKEIIIEVDD---------KNI--PT--D 54 (296)
T ss_dssp EEEEEEEEEEECTGGGTTT-----------EEEEEEEEEEE---EEEEEESSSSEEEEESC---------TTS--CC--C
T ss_pred eEEEEEEeehhccccchhh-----------hHHhcccccEE---EEEEecCCCeEEEEEcC---------CcC--CC--C
Confidence 4889999999999998886 89999987541 45655554456654321 112 21 1
Q ss_pred ChhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH-cC
Q 002861 608 DPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQL-MG 686 (873)
Q Consensus 608 ~~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~-~g 686 (873)
.|.+++..++..+. +......|++|++.++||.|+|||||||+++|++.|+++++|.++++++|+++|..+|.. .|
T Consensus 55 ~~~n~v~~a~~~~~---~~~g~~~g~~i~i~~~iP~g~GLGSSsa~~~a~~~al~~l~~~~l~~~~l~~la~~~e~~~~g 131 (296)
T 1h72_C 55 PDKNVAGIVAKKMI---DDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSG 131 (296)
T ss_dssp TTTSHHHHHHHHHH---HHTTCCCEEEEEEECSSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHS
T ss_pred CccCcHHHHHHHHH---HHhCCCCCeEEEEEcCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhcCcccC
Confidence 14567776666542 112223689999999999999999999999999999999999999999999999999984 56
Q ss_pred CCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcCHHHHHH
Q 002861 687 TGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISS 766 (873)
Q Consensus 687 ~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~~~~~~~ 766 (873)
++++ +|.+++++||+.+.... + + ..++++++++ +++++|++|+...+|+++.+.+. ...+ ....
T Consensus 132 ~~~~-ddv~~~~~gg~~~~~~~-~-~--~~~~~~~~~~------~~~~vl~~p~~~~~T~~~~~~l~----~~~~-~~~~ 195 (296)
T 1h72_C 132 AKHA-DNVAPAIFGGFTMVTNY-E-P--LEVLHIPIDF------KLDILIAIPNISINTKEAREILP----KAVG-LKDL 195 (296)
T ss_dssp SCCC-TTHHHHHHCSEEEEEET-T-T--TEEEEECCCS------CCCEEEECCSSCCCHHHHHHTSC----SCCC-HHHH
T ss_pred CCCc-cchHHHHhCCEEEEEeC-C-c--eEEEEEcCCC------CeEEEEEeCCCCccHHHHHHhcc----CcCc-HHHH
Confidence 6664 67788999999988532 2 1 2456776653 46899999999888888765321 1111 1122
Q ss_pred HHHHHHHHHHHHHHHhccCHHHHHHHH--HHHHHHHhhhCCCCChHHHHHHHHHHccCCceEEecCCCccceeEEEeCCc
Q 002861 767 IKRLTELAKNGRDALMNCDVDELGKIM--LEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFALLLAKDA 844 (873)
Q Consensus 767 ~~~i~~~~~~~~~AL~~gd~~~lg~lm--~~~~~~~~~l~~~vs~p~l~~l~~~a~~ga~G~klsGAGgGG~v~~l~~~~ 844 (873)
+.++.. +.++.++|.++|++.|+++| ++.|+..+. .++|+++++++.+++.++|++|||||+ |+++|+ ++
T Consensus 196 ~~~~~~-~~~~~~al~~~d~~~~~~~~~~n~~h~~~~~----~~~p~l~~~~~~~~~~a~ga~~sGsG~--~v~~l~-~~ 267 (296)
T 1h72_C 196 VNNVGK-ACGMVYALYNKDKSLFGRYMMSDKVIEPVRG----KLIPNYFKIKEEVKDKVYGITISGSGP--SIIAFP-KE 267 (296)
T ss_dssp HHHHHH-HHHHHHHHHTTCHHHHHHHHTTCCSSHHHHH----TTSTTHHHHHHHHTTTEEEEEECTTSS--CEEEEE-CG
T ss_pred HHHHHH-HHHHHHHHHcCCHHHHHHHHhcCcchhhhhh----ccCccHHHHHHHHHhhcceEEEecCCh--heEEEe-cH
Confidence 233322 34678999999999999999 444344332 467999999999986678999999999 999999 45
Q ss_pred chHHHHHHHHHhcC
Q 002861 845 ESATELRRMLEKDS 858 (873)
Q Consensus 845 ~~a~~i~~~L~~~~ 858 (873)
+.++++.+.|++.+
T Consensus 268 ~~~~~~~~~l~~~~ 281 (296)
T 1h72_C 268 EFIDEVENILRDYY 281 (296)
T ss_dssp GGHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 78899999998763
No 17
>3hul_A HSK, HK, homoserine kinase; structural genomics, putative homoserine kinase, THRB, amino-acid biosynthesis, ATP-binding, cytoplasm; 2.19A {Listeria monocytogenes}
Probab=99.94 E-value=4.6e-25 Score=240.21 Aligned_cols=279 Identities=15% Similarity=0.155 Sum_probs=198.5
Q ss_pred EEEEeceEEEeecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCCCCCC
Q 002861 529 VKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHND 608 (873)
Q Consensus 529 v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~~~~~ 608 (873)
+++++|++..++|.++|. +++||++|.+ +++++. +..+.+..... ..+ |.+..+
T Consensus 3 ~~v~vPat~anlG~Gfd~-----------lg~al~l~d~----v~~~~~-~~~~~i~~~~~--------~~~--p~~~~n 56 (298)
T 3hul_A 3 LRIRVPATTANLGPGFDS-----------CGLALTLYLT----LDIGAE-ADSWYIEHNIG--------GGI--PHDETN 56 (298)
T ss_dssp EEEEEEEEEESCTTCTTT-----------EEEEEEEEEE----EEEEEE-CSSCEEECCCC--------TTC--CSSTTS
T ss_pred EEEEEeeceeccCCCcch-----------hhhhcccceE----EEEEEc-CCceEEEecCc--------ccC--CCCCCc
Confidence 789999999999999998 8999999987 667543 23455543211 112 222223
Q ss_pred hhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHcCCC
Q 002861 609 PFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTG 688 (873)
Q Consensus 609 ~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~~g~~ 688 (873)
. ++|++..... ...|++|++.++||.++|||||||+++|++.|++++++.++++++|+++|..+|.
T Consensus 57 l--v~~a~~~~~~-------~~~g~~i~i~~~iP~~~GLGsssa~~~a~~~al~~~~~~~l~~~el~~la~~~eg----- 122 (298)
T 3hul_A 57 V--IIETALNLAP-------NLTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEEKVRIAAEIEG----- 122 (298)
T ss_dssp H--HHHHHHHHCT-------TCCCEEEEEEECSCTTSSSSHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHS-----
T ss_pred H--HHHHHHHHhc-------cCCceEEEEecCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhcC-----
Confidence 2 5666654432 2468999999999999999999999999999999999999999999999999983
Q ss_pred ChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcCHHHHHHHH
Q 002861 689 GGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIK 768 (873)
Q Consensus 689 ~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~~~~~~~~~ 768 (873)
..+|++++++||+.+.... +. .+.+.|+++| +++++|+.++...+|+++.+...+ ..+ ..+.+.
T Consensus 123 -~~ddv~~~~~GG~~~~~g~-ge--~~~~~~~~~p-------~~~~vlv~p~~~~sT~~a~~~l~~----~~~-~~~~~~ 186 (298)
T 3hul_A 123 -HPDNVAPAVLGNWVVGAKL-DG--EDFYVRHLFP-------DCALIAFIPKAELLTSESRGVLPD----TLP-FKEAVQ 186 (298)
T ss_dssp -CSTTHHHHHHCSEEEEEEE-TT--EEEEEEECCC--------CEEEEEECCCCCC--------CC----EEE-HHHHHH
T ss_pred -CcccCcccccCCEEEEEeC-CC--cEEEEEcCCC-------CeEEEEEECCCCCCcHHHHHHHhh----hcc-HHHHHH
Confidence 2268889999999986543 32 2344566654 368999999988888876543211 000 011222
Q ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHH--HHHHhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEEEeCCcc
Q 002861 769 RLTELAKNGRDALMNCDVDELGKIMLEA--WRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALLLAKDAE 845 (873)
Q Consensus 769 ~i~~~~~~~~~AL~~gd~~~lg~lm~~~--~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~l~~~~~ 845 (873)
++. .+..+..+|.++|++.++++|++. |+..+. ...|+++++++.+++ |++|++|||||+ |+++|++ ++
T Consensus 187 ~~~-~~~~~~~al~~~d~~~l~~~l~nd~~~e~~~~----~~~p~l~~l~~~~~~~Ga~ga~~SGsGp--tv~al~~-~~ 258 (298)
T 3hul_A 187 ASS-IANVMIAAILRNDMTLAGEMMERDLWHEKYRS----QLVPHLAQIRDVAKNQGAYAACLSGAGP--TVLVFAP-RN 258 (298)
T ss_dssp HHH-HHHHHHHHHTTTCHHHHHHHHTCCCC-----C----TTGGGHHHHHHHHHTTTCCEEEECTTSS--CEEEEEC-GG
T ss_pred HHH-HHHHHHHHHHcCCHHHHHHHHhhhHHHHHHHH----hhCchHHHHHHHHHHCCCEEEEEeccch--heEEEEC-HH
Confidence 222 245688999999999999999732 332222 236899999999987 899999999997 8999998 57
Q ss_pred hHHHHHHHHHhcCCCceEEEEEeeccC
Q 002861 846 SATELRRMLEKDSNFNSEVYNWNIYLE 872 (873)
Q Consensus 846 ~a~~i~~~L~~~~~~~v~v~~~~i~~~ 872 (873)
.++++.+.|++.+ ...+++.++++.+
T Consensus 259 ~a~~v~~~l~~~~-~~~~~~~~~~~~~ 284 (298)
T 3hul_A 259 LANKLQTSLQTLE-IDADVLLLDVEGS 284 (298)
T ss_dssp GHHHHHHHHHTTC-CSSEEEEEEBCCC
T ss_pred HHHHHHHHHHhcC-CCcEEEEcccCCC
Confidence 8999999998763 4567777777643
No 18
>3pyf_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; transferase; HET: ANP; 1.70A {Mycobacterium tuberculosis} PDB: 3pyd_A* 3pye_A* 3pyg_A* 4ed4_A* 4dxl_A* 4emd_A*
Probab=99.94 E-value=2.7e-25 Score=242.78 Aligned_cols=284 Identities=17% Similarity=0.148 Sum_probs=207.1
Q ss_pred eEEEEeceEEEe----ecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCC
Q 002861 528 TVKVELPVRIDF----AGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATP 603 (873)
Q Consensus 528 ~v~v~aP~Rv~L----~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p 603 (873)
.++++||+|||| .|.+.|- | |.-..+.++|+++.+ +++++.++..|.+..... ..+ |
T Consensus 5 ~~~~~apAKiNL~L~v~~~r~DG--y---h~l~s~~~al~l~D~----l~~~~~~~~~i~~~g~~~--------~~~--p 65 (306)
T 3pyf_A 5 SVTVRVPGKVNLYLAVGDRREDG--Y---HELTTVFHAVSLVDE----VTVRNADVLSLELVGEGA--------DQL--P 65 (306)
T ss_dssp CEEEEEEEEEEEEEEECCCCTTS--C---CCEEEEEEEEEEEEE----EEEEECSSCEEEEESTTG--------GGS--C
T ss_pred cEEEEecceEEeecccCCcCCCC--C---cchheeEEEcccCCE----EEEEECCCCEEEEeCCCc--------cCC--C
Confidence 488999999999 6766663 2 456678899999998 777776555555543211 012 2
Q ss_pred CCCCChhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 002861 604 FDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQ 683 (873)
Q Consensus 604 ~~~~~~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~ 683 (873)
.+. -|++..|+..+. +.+....|++|++.++||.|+|||||||+++|++.|++++++.++++++|+++|.++|
T Consensus 66 ~~~---~Nlv~~A~~~l~---~~~g~~~~~~i~i~~~iP~~~GLGsssa~a~a~l~al~~~~~~~l~~~~l~~la~~~~- 138 (306)
T 3pyf_A 66 TDE---RNLAWQAAELMA---EHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLG- 138 (306)
T ss_dssp CST---TSHHHHHHHHHH---HHTTCCCCEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHC-
T ss_pred CCC---ccHHHHHHHHHH---HHhCCCCCeEEEEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHhC-
Confidence 222 234444444332 1222346999999999999999999999999999999999999999999999999887
Q ss_pred HcCCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcCHHH
Q 002861 684 LMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLL 763 (873)
Q Consensus 684 ~~g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~~~~ 763 (873)
.|++++++||+.+...... .+.|++.++ +++++|++|+...+|+++.+.+.......+
T Consensus 139 --------~Dv~~~~~Gg~~~~~g~ge-----~~~~l~~~~------~~~~vl~~P~~~vsT~~a~~~l~~~~~~~~--- 196 (306)
T 3pyf_A 139 --------SDVPFALHGGTALGTGRGE-----ELATVLSRN------TFHWVLAFADSGLLTSAVYNELDRLREVGD--- 196 (306)
T ss_dssp --------TTHHHHHHBSEEEECSSSS-----CCEEECCSS------CEEEEEEECSSCCCHHHHHHHHHHHHHHSC---
T ss_pred --------CCCceeecCceEEEEeeCC-----eEEEccCCC------CcEEEEEECCCCCcHHHHHHhhhhhccccc---
Confidence 3999999999988764432 246666543 568999999999999988766532211100
Q ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH-HhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEEEe
Q 002861 764 ISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRL-HQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALLLA 841 (873)
Q Consensus 764 ~~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~-~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~l~ 841 (873)
.... ..+..+..+|.++|++.++++|.+.++. ...+ .|+++++++.+++ |++|++|||||+ |+|+|+
T Consensus 197 ---~~~~-~~~~~~~~al~~~d~~~l~~~l~n~le~~~~~~-----~P~l~~i~~~~~~~Ga~ga~mSGsGp--tvfal~ 265 (306)
T 3pyf_A 197 ---PPRL-GEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSL-----DPALARALRAGVEAGALAGIVSGSGP--TCAFLC 265 (306)
T ss_dssp ---CCCC-CCHHHHHHHHHHTCHHHHGGGCEETTHHHHHHH-----CTHHHHHHHHHHHTTCSEEEECTTSS--EEEEEE
T ss_pred ---cccc-cCHHHHHHHHHhCCHHHHHHHhccchHHHHHHh-----ChHHHHHHHHHHhcCCCEEEEcCcch--hheEEe
Confidence 0000 0234678899999999999988544432 2222 5899999999887 899999999997 999999
Q ss_pred CCcchHHHHHHHHHhcCCCceEEEEEeecc
Q 002861 842 KDAESATELRRMLEKDSNFNSEVYNWNIYL 871 (873)
Q Consensus 842 ~~~~~a~~i~~~L~~~~~~~v~v~~~~i~~ 871 (873)
++++.++++.+.|++.+ ...+++..+++.
T Consensus 266 ~~~~~a~~~~~~l~~~g-~~~~v~~~~~~~ 294 (306)
T 3pyf_A 266 TSASSAIDVGAQLSGAG-VCRTVRVATGPV 294 (306)
T ss_dssp SSHHHHHHHHHHHHHTT-SSSEEEEEEECC
T ss_pred CCHHHHHHHHHHHHhcC-CcceEEEeecCC
Confidence 98778899999998763 456677766653
No 19
>2gs8_A Mevalonate pyrophosphate decarboxylase; streptococcus pyogen structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas}
Probab=99.91 E-value=1.4e-22 Score=222.88 Aligned_cols=292 Identities=11% Similarity=0.072 Sum_probs=196.4
Q ss_pred CeEEEEeceEEEeecccccCCCcccCCCCeEEEeee-ecccccceeEEEEE-ecC-CcEEEEeCCCCceeeecCCCCCCC
Q 002861 527 RTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAI-SLESSLPIGTIIET-TKM-SGVLISDDAGNQLHIEDLTPIATP 603 (873)
Q Consensus 527 ~~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI-~l~~~~pi~~~v~~-~~~-~~i~i~~~~~~~~~~~~l~~l~~p 603 (873)
..++++||+||+|+|.|+|++.-...++-..+++++ +++.+ ++++. .++ ..+.+..+ .. +
T Consensus 7 ~~~~~~ap~~i~l~~~~g~~~~g~~lp~~dslg~al~~l~~~----~~v~~~~~~~~~~~~~~~-----------g~--~ 69 (317)
T 2gs8_A 7 NVITVTSYANIAIIKYWGKENQAKMIPSTSSISLTLENMFTT----TSVSFLPDTATSDQFYIN-----------GI--L 69 (317)
T ss_dssp CEEEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEEEEEEE----EEEEECCTTCCSCEEEET-----------TE--E
T ss_pred CcEEEEecCcEEEEeeeeeccCCcccCCCCceEEEeecccce----EEEEEEcCCCCeEEEEEC-----------CC--c
Confidence 458999999999999999997422222334678888 46665 55654 221 11222211 10 0
Q ss_pred CCCCChhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 002861 604 FDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQ 683 (873)
Q Consensus 604 ~~~~~~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~ 683 (873)
...+|.++++.++..+. +.. . .|++|++.++||.|+|||||||+++|++.|+++++|.++++++|+++|..+|.
T Consensus 70 -~~~~~~n~v~~~~~~~~---~~~-~-~g~~I~i~~~IP~~~GLGSSaA~~vA~~~al~~l~g~~ls~~el~~la~~~~G 143 (317)
T 2gs8_A 70 -QNDEEHTKISAIIDQFR---QPG-Q-AFVKMETQNNMPTAAGLSSSSSGLSALVKACDQLFDTQLDQKALAQKAKFASG 143 (317)
T ss_dssp -CCHHHHHHHHHHHTTTC---CTT-C-CCEEEEEECCSCGGGCCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHG
T ss_pred -cccchHHHHHHHHHHHH---Hhc-C-CCeEEEEeCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcc
Confidence 01146678887776542 111 2 78999999999999999999999999999999999999999999999987642
Q ss_pred HcCCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCC-cchHHHHHHHHHHHHhhcCHH
Q 002861 684 LMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQ-VRLAHQVLQKVVTRYLQRDNL 762 (873)
Q Consensus 684 ~~g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~-tr~t~~~l~~v~~~~~~~~~~ 762 (873)
+++++++||+..... ++. .....|++ .+ +...+++++++. ...|...++.+.+. . +.
T Consensus 144 ---------~~~~~~~GG~~~~~~-~~~--~~~~~~~~--~~----~~~~v~i~~~~~~~~~tt~~~~~~~~~---~-~~ 201 (317)
T 2gs8_A 144 ---------SSSRSFFGPVAAWDK-DSG--AIYKVETD--LK----MAMIMLVLNAAKKPISSREGMKLCRDT---S-TT 201 (317)
T ss_dssp ---------GGGGGGSCSEEEECT-TTC--CEEECCCC--CC----EEEEEEECCCSSCCSCHHHHHHHHHHH---C-TT
T ss_pred ---------hhHhhhcCChheEee-CCC--ceeEEEcc--cc----ccEEEEEEECCCcCcccHHHHHHHhhc---C-HH
Confidence 567899999998764 332 12234442 21 222344446654 33566655543322 1 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhC----CC--CChHHHHHHHHHH---c-cCCceEEecCCC
Q 002861 763 LISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELD----PH--CSNEFVDRLFAFA---D-PYCCGYKLVGAG 832 (873)
Q Consensus 763 ~~~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~----~~--vs~p~l~~l~~~a---~-~ga~G~klsGAG 832 (873)
..+...+....+.++..||.++|++.||++|++++..+++++ +. ...|...++++.+ + .|+.++.+||||
T Consensus 202 ~~~~~~~~~~~~~~~~~al~~~d~~~lg~~~~~~~~~l~~~~~~~~p~~~~l~~~~~~i~~~~~~~~~~G~~~~~~SGaG 281 (317)
T 2gs8_A 202 FDQWVEQSAIDYQHMLTYLKTNNFEKVGQLTEANALAMHATTKTANPPFSYLTKESYQAMEAVKELRQEGFACYFTMDAG 281 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSSSCCCSCCHHHHHHHHHHHHHHHTTCCEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccCCCceeEhHHHHHHHHHHHHHHhcCCcEEEEecCC
Confidence 112223345567789999999999999999998876555432 11 2346666666433 3 388899999998
Q ss_pred ccceeEEEeCCcchHHHHHHHHHhcCCCceEEEEEeec
Q 002861 833 GGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNIY 870 (873)
Q Consensus 833 gGG~v~~l~~~~~~a~~i~~~L~~~~~~~v~v~~~~i~ 870 (873)
+ ++++|+++ +.++++.+.+++ ..++|.+++.
T Consensus 282 p--tv~~l~~~-~~~~~v~~~l~~----~~~~~~~~~~ 312 (317)
T 2gs8_A 282 P--NVKVLCLE-KDLAQLAERLGK----NYRIIVSKTK 312 (317)
T ss_dssp S--CEEEEEEG-GGHHHHHHHHHT----TSEEEEEEBC
T ss_pred C--eEEEEEcH-HHHHHHHHHHhc----CCeEEEEecC
Confidence 8 99999985 567889999987 4678887764
No 20
>3qt5_A Mevalonate diphosphate decarboxylase; GHMP kinase family, lyase; 1.85A {Staphylococcus epidermidis} PDB: 3qt6_A* 3qt7_A* 4dpt_A* 4du7_A* 4dpu_A* 3qt8_A* 4dpx_A 4dpy_A* 4du8_A* 4dpw_A* 2hk2_A 2hk3_A
Probab=99.91 E-value=1e-22 Score=224.83 Aligned_cols=297 Identities=13% Similarity=0.090 Sum_probs=195.5
Q ss_pred eEEEEeceEEEeecccccCCCcccCCCCeEEEeeee-cccccceeEEEEEecCC-cEEEEeCCCCceeeecCCCCCCCCC
Q 002861 528 TVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAIS-LESSLPIGTIIETTKMS-GVLISDDAGNQLHIEDLTPIATPFD 605 (873)
Q Consensus 528 ~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~-l~~~~pi~~~v~~~~~~-~i~i~~~~~~~~~~~~l~~l~~p~~ 605 (873)
.++++||+||+|+|.|.|+..-...-+-..+++|++ ++++ ++++..++. ...+..+ .-..|
T Consensus 9 ~~~~~ap~nialiky~gk~~~~~~lP~~dslglal~~~~~~----~~v~~~~~~~~~~~~i~-----------g~~~~-- 71 (332)
T 3qt5_A 9 SGKARAHTNIALIKYWGKADETYIIPMNNSLSVTLDRFYTE----TKVTFDPDFTEDCLILN-----------GNEVN-- 71 (332)
T ss_dssp EEEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEEEEEEE----EEEEEETTCSSCEEEET-----------TEECC--
T ss_pred EEEEEecCcEEEEeeeeeccCCccccCCCceEEEecCCCCe----eEEEEcCCCCccEEEEC-----------CccCC--
Confidence 478999999999999999973111113345777776 3444 445433221 1111111 10011
Q ss_pred CCChhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHc
Q 002861 606 HNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLM 685 (873)
Q Consensus 606 ~~~~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~~ 685 (873)
.++.+++..++..+. +......|++|++.++||.++|||||||.++|++.|++++++.++++++|+++|.++|
T Consensus 72 -~~~~n~v~~~~~~~~---~~~~~~~~~~i~~~~~iP~~~GLgSSaa~~~a~~~a~~~l~~~~l~~~el~~la~~~~--- 144 (332)
T 3qt5_A 72 -AKEKEKIQNYMNIVR---DLAGNRLHARIESENYVPTAAGLASSASAYAALAAACNEALSLNLSDTDLSRLARRGS--- 144 (332)
T ss_dssp -HHHHHHHHHHHHHHH---HHHTCCCEEEEEEEEESCGGGTCCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHC---
T ss_pred -cchHHHHHHHHHHHH---HhcCCCCCEEEEEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhc---
Confidence 235567766665542 1222346899999999999999999999999999999999999999999999998874
Q ss_pred CCCChhhhhHhhcccCeeEEecC-CCCcceeEEEeecCChhhhhhcCcEEEEEEeCC---cchHHHHHHHHHHHHhhcCH
Q 002861 686 GTGGGWQDQIGGLYPGIKFTSSF-PGIPLRLQVIPLLASPQLILELQQRLLVVFTGQ---VRLAHQVLQKVVTRYLQRDN 761 (873)
Q Consensus 686 g~~~G~~Dq~~~~~GG~~~~~~~-~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~---tr~t~~~l~~v~~~~~~~~~ 761 (873)
| |.+++++||+..+... ++. .....|++..+. ..+++++++.+.. +.+++..+++.++. +.
T Consensus 145 ----g--~~~~~~~GG~~~~~~g~~~~--~~~~~~l~~~~~---~~~l~~vv~vp~~~~~~~ss~~~~~~~~~~----s~ 209 (332)
T 3qt5_A 145 ----G--SASRSIFGGFAEWEKGHDDL--TSYAHGINSNGW---EKDLSMIFVVINNQSKKVSSRSGMSLTRDT----SR 209 (332)
T ss_dssp ----G--GGGGGGSCSEEEEECCSSTT--TCEEEEECCTTG---GGGEEEEEECCCCCCCC--CHHHHHHHHHH----CT
T ss_pred ----C--CchhhhcCCeEEEecCCCCc--cceeeecccccC---CCCcEEEEEEEcCCCCCCchHHHHHHhhhc----Ch
Confidence 3 7788999999986432 221 112355541100 0245666555443 55677777765332 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH-HHHhhhC---CC--CChHHHHHHHHHHc----cCCceEEecCC
Q 002861 762 LLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAW-RLHQELD---PH--CSNEFVDRLFAFAD----PYCCGYKLVGA 831 (873)
Q Consensus 762 ~~~~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~-~~~~~l~---~~--vs~p~l~~l~~~a~----~ga~G~klsGA 831 (873)
.+.+.+.++.+.+..+..||.++|++.|+++|++++ .+++... +. ...|+++++++.++ .|++|+.+|||
T Consensus 210 ~~~~~v~~~~~~~~~l~~Al~~~D~~~l~~~~~~d~~~lh~~~~~~~p~~~yl~p~~~~i~~~~~~~~~~Ga~~a~~SGa 289 (332)
T 3qt5_A 210 FYQYWLDHVDEDLNEAKEAVKNQDFQRLGEVIEANGLRMHATNLGAQPPFTYLVQESYDAMAIVEQCRKANLPCYFTMDA 289 (332)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSSSCCCSCCHHHHHHHHHHHHHHHTTCCEEEECCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcccCCCceeeChHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 223344455556778999999999999999998443 2222211 11 14589998888883 48999999999
Q ss_pred CccceeEEEeCCcchHHHHHHHHHhcCCCceEEEEE
Q 002861 832 GGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNW 867 (873)
Q Consensus 832 GgGG~v~~l~~~~~~a~~i~~~L~~~~~~~v~v~~~ 867 (873)
|+ ++++|+++ +.++++.+.|++.+. ..+++.+
T Consensus 290 GP--tv~~l~~~-~~a~~v~~~l~~~~~-~~~~~v~ 321 (332)
T 3qt5_A 290 GP--NVKVLVEK-KNKQAVMEQFLKVFD-ESKIIAS 321 (332)
T ss_dssp SS--CEEEEEEH-HHHHHHHHHHHTTSC-GGGEEEE
T ss_pred CC--cEEEEECH-HHHHHHHHHHHHhCC-CceEEEe
Confidence 87 99999985 678999999987632 3345544
No 21
>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A*
Probab=99.91 E-value=4.4e-24 Score=229.55 Aligned_cols=250 Identities=14% Similarity=0.087 Sum_probs=183.6
Q ss_pred EEEEeceEEEe----ecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCC
Q 002861 529 VKVELPVRIDF----AGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPF 604 (873)
Q Consensus 529 v~v~aP~Rv~L----~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~ 604 (873)
++++||||||| .|.+.| +| |++.++++||+++.+ + +++ +..+.+.. +.+ |.
T Consensus 5 ~~~~aPakinl~l~v~g~r~d--gy---h~~~sl~~ai~l~~~----v-~~~--~~~i~i~~-----------~~~--~~ 59 (271)
T 2v8p_A 5 IKVLSPAKINLGLWVLGRLPS--GY---HEILTLYQEIPFYDE----I-YIR--EGVLRVET-----------NIG--IP 59 (271)
T ss_dssp EEEEEEEEEEEEEEEEEECTT--SC---EEEEEEEEEEEEEEE----E-EEE--ESSCEEEE-----------SSC--CC
T ss_pred EEEeecceEEeeEeecccCCC--CC---ceEEEEEEEcCcccE----E-EEe--CCeEEEEe-----------CCC--CC
Confidence 78999999999 688888 22 478899999999987 5 655 23444443 111 11
Q ss_pred CCCChhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 002861 605 DHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQL 684 (873)
Q Consensus 605 ~~~~~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~ 684 (873)
++.+++..++..+. +......|++|++.++||.|+|||||||+++|++.|++++++.++++++|+++|.++|.
T Consensus 60 ---~~~nlv~~a~~~~~---~~~g~~~g~~i~i~~~IP~g~GLGsSsa~a~a~l~al~~l~~~~l~~~el~~la~~~e~- 132 (271)
T 2v8p_A 60 ---QEENLVYKGLREFE---RITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISA- 132 (271)
T ss_dssp ---TTTCHHHHHHHHHH---HHHCCCCCEEEEEECCSCTTSSSCHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHCT-
T ss_pred ---CCchHHHHHHHHHH---HHhCCCCCeEEEEEeCCCCCCCCchHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC-
Confidence 23456665555432 11222368999999999999999999999999999999999999999999999999872
Q ss_pred cCCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcCHHHH
Q 002861 685 MGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLI 764 (873)
Q Consensus 685 ~g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~~~~~ 764 (873)
|++++++||+.+...... .+++++++ .++++++++|+...+|.++++.+... +.
T Consensus 133 --------dv~~~~~gg~~~~~g~g~-----~~~~l~~~------~~~~~vl~~p~~~~sT~~~~~~~~~~---~~---- 186 (271)
T 2v8p_A 133 --------DAPFFLLGKSAIGRGKGE-----VLEPVETE------ISGKITLVIPQVSSSTGRVYSSLREE---HF---- 186 (271)
T ss_dssp --------TTGGGGTCSEEEEETTTT-----EEEECCCC------CCSEEEEEECSSCCCHHHHHHTCCTT---SC----
T ss_pred --------CHHHHhcCCeEEEEEcCC-----EEEEccCC------CCcEEEEEeCCCCCCHHHHHHhcccc---cC----
Confidence 899999999998764432 35666533 14689999999999998876542110 10
Q ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHcc-CCceEE-ecCCCccceeEEEeC
Q 002861 765 SSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP-YCCGYK-LVGAGGGGFALLLAK 842 (873)
Q Consensus 765 ~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~k-lsGAGgGG~v~~l~~ 842 (873)
.+ +..+ .+|.++|++.++++|++..+..+. ..+|+++++++.+++ |+ ++ |||||+ |+++|++
T Consensus 187 ---~~----~~~~-~al~~~d~~~~~~~~~n~l~~~~~----~~~p~l~~~~~~~~~~Ga--a~~mSGsG~--~v~~l~~ 250 (271)
T 2v8p_A 187 ---VT----PEYA-EEKIQRIISGEVEEIENVLGDIAR----ELYPEINEVYRFVEYLGF--KPFVSGSGS--TVYFFGG 250 (271)
T ss_dssp ---CC----HHHH-HHHHHHHHTTCGGGCCBHHHHHHH----HHCHHHHHHHHHHHHTTC--CCEECTTSS--CEEESSC
T ss_pred ---cc----hhHH-HHhhcCCHHHHHHHHhCChhhHhH----HhChHHHHHHHHHHhCCC--ccCccccCc--CeEEEeC
Confidence 11 1234 788889999898888544333211 236899999999886 66 89 999985 9999998
Q ss_pred CcchHHHHHH
Q 002861 843 DAESATELRR 852 (873)
Q Consensus 843 ~~~~a~~i~~ 852 (873)
+.+.++++.+
T Consensus 251 ~~~~a~~~~~ 260 (271)
T 2v8p_A 251 ASEELKKAAK 260 (271)
T ss_dssp CCHHHHHHHH
T ss_pred CHHHHHHHHh
Confidence 7667777766
No 22
>2ww4_A 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; non-mevalonate pathway, isoprenoid biosynthesis, transferase; HET: ADP; 2.00A {Escherichia coli} PDB: 1oj4_A*
Probab=99.90 E-value=3.1e-23 Score=224.29 Aligned_cols=252 Identities=16% Similarity=0.178 Sum_probs=177.4
Q ss_pred EEEEeceEEEe----ecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCC
Q 002861 529 VKVELPVRIDF----AGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPF 604 (873)
Q Consensus 529 v~v~aP~Rv~L----~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~ 604 (873)
+.++||||||| +|+|+| +| |.+.++.+||+++.+ +++++.++..+.+.++. +.+ |.
T Consensus 3 ~~~~apaKinL~L~v~g~~~d--Gy---h~l~sl~~ai~l~~~----v~v~~~~~~~i~i~~~~---------~~~--~~ 62 (283)
T 2ww4_A 3 TQWPSPAKLNLFLYITGQRAD--GY---HTLQTLFQFLDYGDT----ISIELRDDGDIRLLTPV---------EGV--EH 62 (283)
T ss_dssp EEEEEEEEEEEEEEEEEECTT--SC---EEEEEEEEEEEEEEE----EEEEEESSSCEEECSCB---------TTB--CG
T ss_pred ccccCceeEEeeeeccCCCCC--CC---cceEEEEEECCCCcE----EEEEECCCCcEEEEeCC---------CCC--CC
Confidence 55789999999 799999 22 478899999999998 77877765566664321 112 21
Q ss_pred CCCChhHHHHHHHHHhhhhhhcc------ccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 002861 605 DHNDPFRLVKSALLVTGVIHEKL------IESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLV 678 (873)
Q Consensus 605 ~~~~~~~~~kaal~~~~~~~~~~------~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la 678 (873)
..+++..++..+. +.. ....|++|++.++||.|+|||||||+++|++.|+++++|.++++++|+++|
T Consensus 63 ----~~nlv~~a~~~~~---~~~~~~~~~g~~~g~~i~i~~~IP~g~GLGsSsa~~~a~l~al~~l~~~~l~~~~l~~la 135 (283)
T 2ww4_A 63 ----EDNLIVRAARLLM---KTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMG 135 (283)
T ss_dssp ----GGSHHHHHHHHHH---HHHHHTTCSCTTCEEEEEEECCCC-CTTSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred ----cccHHHHHHHHHH---HHhhhhcccCCCCceEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCcCHHHHHHHH
Confidence 1346666555432 111 224689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhh
Q 002861 679 LLLEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQ 758 (873)
Q Consensus 679 ~~~E~~~g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~ 758 (873)
.++|. |++++++||+.+....++ .+++++++ +..+++++|+...+|+++++. .+ ...
T Consensus 136 ~~~e~---------dv~~~~~gg~~~~~g~g~-----~~~~l~~~-------~~~~vl~~p~~~~sT~~~~~~-~~-~~~ 192 (283)
T 2ww4_A 136 LTLGA---------DVPVFVRGHAAFAEGVGE-----ILTPVDPP-------EKWYLVAHPGVSIPTPVIFKD-PE-LPR 192 (283)
T ss_dssp HTTCT---------THHHHHHTBCEEEETTTT-----EEEECCCC-------CCEEEEECCSCCCCHHHHHTC-TT-SCC
T ss_pred HHhCC---------CHHHhhcCCeEEEEecCc-----cceEcCCC-------CcEEEEEeCCCCCchHHHHhc-cc-ccc
Confidence 88763 899999999998765433 34666543 468999999999999998765 22 111
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHccCCceEEecCCCccceeE
Q 002861 759 RDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFAL 838 (873)
Q Consensus 759 ~~~~~~~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~ga~G~klsGAGgGG~v~ 838 (873)
.+. ...+ .+|.++++ +++.+..... ..|+++++++.+++.. |+++||||+ |++
T Consensus 193 ~~~-----~~~l--------~~l~~~~~------~nd~~~~~~~-----~~p~l~~i~~~~~~~G-~a~~SGsG~--tvf 245 (283)
T 2ww4_A 193 NTP-----KRSI--------ETLLKCEF------SNDCEVIARK-----RFREVDAVLSWLLEYA-PSRLTGTGA--CVF 245 (283)
T ss_dssp CCC-----CCCH--------HHHHTSCC------CBTTHHHHHH-----HCHHHHHHHHHHHTTS-CEEECTTSS--CEE
T ss_pred cch-----HHHH--------HHHHhhhh------cCchHHHHHh-----cChHHHHHHHHHHHcC-CceECCccc--ceE
Confidence 110 0111 12222321 1211111222 2589999999998733 899999986 999
Q ss_pred EEeCCcchHHHHHHHHHhc
Q 002861 839 LLAKDAESATELRRMLEKD 857 (873)
Q Consensus 839 ~l~~~~~~a~~i~~~L~~~ 857 (873)
+++++++.++++.+.|++.
T Consensus 246 ~l~~~~~~a~~~~~~l~~~ 264 (283)
T 2ww4_A 246 AEFDTESEARQVLEQAPEW 264 (283)
T ss_dssp EEESSHHHHHHHHHHCCC-
T ss_pred EEeCCHHHHHHHHHHhhhh
Confidence 9998755678888887654
No 23
>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} SCOP: d.14.1.5 d.58.26.5
Probab=99.89 E-value=3.7e-23 Score=222.81 Aligned_cols=261 Identities=17% Similarity=0.084 Sum_probs=182.1
Q ss_pred EEEEeceEEEe----ecccccCCCcccCCCCeEEEeeeecccccceeEEEEEecCCcEEEEeCCCCceeeecCCCCCCCC
Q 002861 529 VKVELPVRIDF----AGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPF 604 (873)
Q Consensus 529 v~v~aP~Rv~L----~G~~tD~~~~~~~~gG~Vl~~AI~l~~~~pi~~~v~~~~~~~i~i~~~~~~~~~~~~l~~l~~p~ 604 (873)
+++ ||||||| .|.+.|- | |...+++++|+++.+ +++++ + .+.+..+. ++ |
T Consensus 2 i~~-aPakinl~l~v~g~r~dg--y---h~~~sl~~ai~l~~~----v~~~~-~--~~~i~~~~----------~~--~- 55 (275)
T 1uek_A 2 ERL-APAKVNLGLSVRFRREDG--Y---HELHTLFAPFSLADR----LVVEP-V--SSGLHFQG----------PY--G- 55 (275)
T ss_dssp EEE-EEEEEEEEEEEEEECTTS--S---EEEEEEEEEEEEEEE----EEEEE-E--SSCEEEES----------TT--G-
T ss_pred cee-ecCeEEEeeeecCcCCCC--C---ceeeEEEEEcCCCCE----EEEEE-C--cEEEEEcC----------CC--C-
Confidence 566 9999999 4887772 2 477899999999987 66665 2 23332211 11 1
Q ss_pred CCCChhHHHHHHHHHhhhhhhccccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 002861 605 DHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQL 684 (873)
Q Consensus 605 ~~~~~~~~~kaal~~~~~~~~~~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~ 684 (873)
..+++..++..+. +......|++|++.++||.|+|||||||+++|++.|++++++.++ +|+++|..+|.
T Consensus 56 ----~~n~v~~a~~~~~---~~~g~~~g~~i~i~~~IP~g~GLGSSsa~a~a~l~al~~l~~~~l---~l~~la~~~g~- 124 (275)
T 1uek_A 56 ----RENLAYRAASLYL---EAAGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEV---DLFALARTLGA- 124 (275)
T ss_dssp ----GGSHHHHHHHHHH---HHTTCCCEEEEEEECCSCSSSSSCHHHHHHHHHHHHHHHHSCSCC---CHHHHHHHHCT-
T ss_pred ----CccHHHHHHHHHH---HHhCCCCCEEEEEecCCCCcCcccHHHHHHHHHHHHHHHHcCCCh---HHHHHHHHhCC-
Confidence 1235655554432 112234689999999999999999999999999999999999988 89999888752
Q ss_pred cCCCChhhhhHhhcccCeeEEecCCCCcceeEEEeecCChhhhhhcCcEEEEEEeCCcchHHHHHHHHHHHHhhcCHHHH
Q 002861 685 MGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLI 764 (873)
Q Consensus 685 ~g~~~G~~Dq~~~~~GG~~~~~~~~~~~~~~~v~pl~~~~~~~~~~~~~lllv~tg~tr~t~~~l~~v~~~~~~~~~~~~ 764 (873)
|++++++||+.+....+. .++|++ ++ ++++++++|+.+.+|+++++.+........+.
T Consensus 125 --------dv~~~~~Gg~~~~~g~g~-----~~~~l~-~~------~~~~vl~~p~~~~sT~~~~~~~~~~~~~~~~~-- 182 (275)
T 1uek_A 125 --------DVPFFLLGRGAEARGVGE-----RLKPLA-LP------PVPAVVFFPGLRVPTPLVYRAVRPEDFGPDLP-- 182 (275)
T ss_dssp --------THHHHHHCSEEEEETTTT-----EEEEEC-CC------CEEEEEEECCCCCCHHHHHHTCCGGGCCCCCC--
T ss_pred --------ChHHHhcCCeEEEEccCc-----eeEEcc-CC------CcEEEEEeCCCCCchHHHHHhCchhhcccCCC--
Confidence 999999999998865432 356775 32 56899999999999998876532110000000
Q ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHHHcc-CCceEEecCCCccceeEEEeCC
Q 002861 765 SSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALLLAKD 843 (873)
Q Consensus 765 ~~~~~i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~~~vs~p~l~~l~~~a~~-ga~G~klsGAGgGG~v~~l~~~ 843 (873)
+..+..+|.++ ++. +.|++.+..... .+|+++++++.+++ |++|++|||||+ |+++|+++
T Consensus 183 ---------~~~~~~al~~~-~~~--~~~n~l~~~~~~-----~~p~l~~l~~~~~~~Ga~ga~~SGsG~--~v~~l~~~ 243 (275)
T 1uek_A 183 ---------VEAILEALARG-EEP--PYWNSLEGPAFR-----LFPELKEVRGRMRALGLRGVLMSGSGS--AFFGLAEG 243 (275)
T ss_dssp ---------HHHHHHHHHHT-CCC--SCCBTTHHHHHH-----HCTHHHHHHHHHHHTTCEEEEECTTSS--CEEEECSS
T ss_pred ---------hHHHHHHHHhc-ccc--ccccchHHHHHH-----hChHHHHHHHHHHhCCCCEEEEecccc--CeEEEeCC
Confidence 12345556555 332 233331111112 24899999999887 899999999996 99999987
Q ss_pred cchHHHHHHHHHhcCCCceEEEEEeecc
Q 002861 844 AESATELRRMLEKDSNFNSEVYNWNIYL 871 (873)
Q Consensus 844 ~~~a~~i~~~L~~~~~~~v~v~~~~i~~ 871 (873)
++.++++.+.|++. . ++|..+++.
T Consensus 244 ~~~~~~~~~~l~~~---~-~~~~~~~~~ 267 (275)
T 1uek_A 244 PDHARRAAEALRAW---G-RAWAGTLGG 267 (275)
T ss_dssp HHHHHHHHHHHTTT---S-EEEEEEECC
T ss_pred HHHHHHHHHHhhhc---c-EEEEEEecC
Confidence 55788899998864 4 788887753
No 24
>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, CHOL biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} SCOP: d.14.1.5 d.58.26.2
Probab=99.85 E-value=8.3e-19 Score=199.29 Aligned_cols=292 Identities=19% Similarity=0.146 Sum_probs=183.7
Q ss_pred eEEEEeceEEEeecccccCCCcccCCCCeEEEeeee---cccccceeEEEEEecC-CcEEEEeCCCCceeeecCCCCCCC
Q 002861 528 TVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAIS---LESSLPIGTIIETTKM-SGVLISDDAGNQLHIEDLTPIATP 603 (873)
Q Consensus 528 ~v~v~aP~Rv~L~G~~tD~~~~~~~~gG~Vl~~AI~---l~~~~pi~~~v~~~~~-~~i~i~~~~~~~~~~~~l~~l~~p 603 (873)
.++++||+||.|++.|.++..-...+.-..+++|++ ++++ ++|+..++ ..+.+. ++.-..+
T Consensus 25 ~~~~~Ap~nialik~~gkr~~~~~~P~~dslg~aL~~~~l~~~----~~v~~~~~~~~~~i~-----------i~G~~~~ 89 (416)
T 1fi4_A 25 TASVTAPVNIATLKYWGKRDTKLNLPTNSSISVTLSQDDLRTL----TSAATAPEFERDTLW-----------LNGEPHS 89 (416)
T ss_dssp EEEEEECCEEEEECCCCEEETTTTEESSCEEEEEBCTTTSCEE----EEEEECTTCCSCBCT-----------TTCCBSS
T ss_pred EEEEEecceEEEEecccccCCceecccccceEEEEEcCCCcce----EEEEEcCCCCccEEE-----------ECCcccc
Confidence 488999999999999998763222233457899998 7876 56655322 111111 1110011
Q ss_pred CCCCChhHHHHHHHHHhhhhhhc---------cccccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHH
Q 002861 604 FDHNDPFRLVKSALLVTGVIHEK---------LIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENV 674 (873)
Q Consensus 604 ~~~~~~~~~~kaal~~~~~~~~~---------~~~~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL 674 (873)
.. .++++.++..+...... .....|++|++.++||.++|||||||.++|++.|+++++|.+++.++|
T Consensus 90 ~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~I~i~~~IP~~aGLGSSAA~aaA~l~Aln~l~gl~Ls~~eL 165 (416)
T 1fi4_A 90 ID----NERTQNCLRDLRQLRKEMESKDASLPTLSQWKLHIVSENNFPTAAGLASSAAGFAALVSAIAKLYQLPQSTSEI 165 (416)
T ss_dssp SS----SSSHHHHHHHHHHHHHHHHTTCTTSCCGGGSCEEEEEEECCCTTSCCCHHHHHHHHHHHHHHHHTTCCSCHHHH
T ss_pred cc----chHHHHHHHHHHHHhccccccccccccccCCcEEEEEecCCcCcCCccHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 11 12455555443210000 011468999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCChhhhhHhhcccCeeEEecCCC-CcceeEEEeecCChhhhhhcCcE--EEEEEeCC-cchHHHHHH
Q 002861 675 ARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTSSFPG-IPLRLQVIPLLASPQLILELQQR--LLVVFTGQ-VRLAHQVLQ 750 (873)
Q Consensus 675 ~~la~~~E~~~g~~~G~~Dq~~~~~GG~~~~~~~~~-~~~~~~v~pl~~~~~~~~~~~~~--lllv~tg~-tr~t~~~l~ 750 (873)
+++|..++ | |++++++||+.......+ ........+++..+.+ .++. +++++++. +..+...++
T Consensus 166 a~lA~~g~-------G--s~~~sl~GG~v~~~~G~~~~~~~~~~~~l~~~~~~---p~l~~vvlv~~~~~~~~sst~~~~ 233 (416)
T 1fi4_A 166 SRIARKGS-------G--SACRSLFGGYVAWEMGKAEDGHDSMAVQIADSSDW---PQMKACVLVVSDIKKDVSSTQGMQ 233 (416)
T ss_dssp HHHHHHHH-------G--GGGGGGSSSEEEEECCSCTTCTTCEEEEEECGGGS---TTEEEEEEEECCCSCCCCHHHHHH
T ss_pred HHHHhccC-------C--chheEeeCCcEEEecCCcCCCCCceeEEecCccCC---cccEEEEEEECCCCCCcCCHHHHH
Confidence 99997664 2 678899999988642210 1111233455432111 1334 44555533 345666555
Q ss_pred HHHHHHhhcCHHHHHHHHH-HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhhC----CC--CChHHHHHHHHHHc---
Q 002861 751 KVVTRYLQRDNLLISSIKR-LTELAKNGRDALMNCDVDELGKIMLEAWRLHQELD----PH--CSNEFVDRLFAFAD--- 820 (873)
Q Consensus 751 ~v~~~~~~~~~~~~~~~~~-i~~~~~~~~~AL~~gd~~~lg~lm~~~~~~~~~l~----~~--vs~p~l~~l~~~a~--- 820 (873)
..++. .+.+...+.+ ....+..+..||.++|++.|+++|.+++..+..++ +. ...|...++++.+.
T Consensus 234 ~~~~~----~~~~~~~~~~i~~~~~~~l~~AL~~gD~~~~g~~~~~d~~~lh~~~~~~~p~~~~l~p~~~~i~~~~~~~r 309 (416)
T 1fi4_A 234 LTVAT----SELFKERIEHVVPKRFEVMRKAIVEKDFATFAKETMMDSNSFHATCLDSFPPIFYMNDTSKRIISWCHTIN 309 (416)
T ss_dssp HHHHH----CSHHHHHHHTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSCCCCCCHHHHHHHHHHHHHH
T ss_pred HHhhc----CHhHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccCCceeeecHHHHHHHHHHHHHH
Confidence 54322 1111222332 33456789999999999999999987655443311 11 24466777765543
Q ss_pred c--C-CceEEecCCCccceeEEEeCCcchHHHHHHHHHhc
Q 002861 821 P--Y-CCGYKLVGAGGGGFALLLAKDAESATELRRMLEKD 857 (873)
Q Consensus 821 ~--g-a~G~klsGAGgGG~v~~l~~~~~~a~~i~~~L~~~ 857 (873)
. | +.++.+||||+ ++++|+++ +.++++.+.|++.
T Consensus 310 ~~~Ga~~~a~~SGaGP--tv~al~~~-~~~~~v~~~l~~~ 346 (416)
T 1fi4_A 310 QFYGETIVAYTFDAGP--NAVLYYLA-ENESKLFAFIYKL 346 (416)
T ss_dssp HHHTSCCEEEEECSSS--CEEEEEEG-GGHHHHHHHHHHH
T ss_pred HhcCCceEEEEecCCC--cEEEEECH-HHHHHHHHHHHHh
Confidence 2 6 67788999998 89999975 4567777777654
No 25
>2hke_A Diphosphomevalonate decarboxylase, putative; mevalonate diphosphate decarboxylase, lyase; 1.80A {Trypanosoma brucei}
Probab=99.77 E-value=7.3e-17 Score=181.41 Aligned_cols=262 Identities=16% Similarity=0.120 Sum_probs=164.6
Q ss_pred CCeEEEeeee---cccccceeEEEEEecC-CcEEEEeCCCCceeeecCCCCCCCCCCCChhHHHHHHHHHhhhhhhcccc
Q 002861 554 AGCVLNVAIS---LESSLPIGTIIETTKM-SGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIE 629 (873)
Q Consensus 554 gG~Vl~~AI~---l~~~~pi~~~v~~~~~-~~i~i~~~~~~~~~~~~l~~l~~p~~~~~~~~~~kaal~~~~~~~~~~~~ 629 (873)
+-..|++|++ +|.+ ++|+..++ ..+.+..+. . .. +. ...++++.++..+.. ....
T Consensus 33 ~~dslglaL~~~~l~~~----~~v~~~~~~~~~~i~i~g-~--~~--------~~---~~~~~v~~~~~~~~~---~~~~ 91 (380)
T 2hke_A 33 TNDSFSITLSASPFRSK----TSVELRDDIETDTLRLNG-T--EV--------DV---GKTPRVQSMLLHLRS---TCPE 91 (380)
T ss_dssp SSCEEEEEBCSSSCCEE----EEEEEESSCSSCEEEETT-E--EE--------CG---GGCHHHHHHHHHHHT---SSCH
T ss_pred CCCceEEEecCCCCceE----EEEEECCCCCccEEEECC-c--cc--------Cc---hhHHHHHHHHHHHHH---Hhcc
Confidence 4468999999 8987 66765432 223333221 0 00 00 012466666655431 1122
Q ss_pred ---ccCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHcCCCChhhhhHhhcccCeeEEe
Q 002861 630 ---SMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTS 706 (873)
Q Consensus 630 ---~~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~~g~~~G~~Dq~~~~~GG~~~~~ 706 (873)
..|++|++.++||.++|||||||.++|++.|+++++|.+ ++|+++|...+ | |++++++||++...
T Consensus 92 ~~~~~~v~I~~~~~IP~aaGLGSSAA~aaA~l~Aln~l~gl~---~eL~~lA~~g~-------G--sva~s~~GG~v~~~ 159 (380)
T 2hke_A 92 ELKNKKVNIVSENNFPTAAGMASSASGYCAMSAALIRAFKST---TNVSMLARLGS-------G--SACRSAFGGFVIWN 159 (380)
T ss_dssp HHHTCEEEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHTCS---SCHHHHHHHHC-------G--GGGGGGSSSEEEEE
T ss_pred cCCCCCEEEEEeccCCCccCcchHHHHHHHHHHHHHHHcCCH---HHHHHHHhhcC-------c--ceeeehhCCeEEEe
Confidence 568999999999999999999999999999999999987 88998887542 2 78899999998754
Q ss_pred cCCC-CcceeEEEeecCChhhhhhcCcE--EEEEEeC-CcchHHHHHHHHHHHHhhcCHHHHHHHHH-HHHHHHHHHHHH
Q 002861 707 SFPG-IPLRLQVIPLLASPQLILELQQR--LLVVFTG-QVRLAHQVLQKVVTRYLQRDNLLISSIKR-LTELAKNGRDAL 781 (873)
Q Consensus 707 ~~~~-~~~~~~v~pl~~~~~~~~~~~~~--lllv~tg-~tr~t~~~l~~v~~~~~~~~~~~~~~~~~-i~~~~~~~~~AL 781 (873)
...+ ........+++.+..+ .+.. +++++++ .+..+....+++++.. +.+...+++ ....+..+..||
T Consensus 160 ~g~~~~~~~~~~~~l~~~~~~---p~l~~~vlv~~~~~~~~sst~~~r~~~~~~----~~~~~~~~~~~~~~~~~l~~Al 232 (380)
T 2hke_A 160 KGEKPDGSDCVATQFVDETHW---PEIQVMCAVLKGAQKDVSSTKGMQQSLKTS----PLMKKRISETVPERMKIASRAI 232 (380)
T ss_dssp CCSCTTSTTCEEEEEECTTSC---TTEEEEEEECCCCSCCCCHHHHHHHHHHHC----TTHHHHHHTHHHHHHHHHHHHH
T ss_pred cCCCCCCCcceEEeccCcccC---CcceEEEEEecCCCCCCCCHHHHHHHHhcC----hhHHHHHHHHHHHHHHHHHHHH
Confidence 3210 1111234555432111 1233 3333433 3445655555443221 111222332 344567799999
Q ss_pred hccCHHHHHHHHHHHHHHHhh----hCCC--CChHHHHHHHHHHcc-----C-CceEEecCCCccceeEEEeCCcchHHH
Q 002861 782 MNCDVDELGKIMLEAWRLHQE----LDPH--CSNEFVDRLFAFADP-----Y-CCGYKLVGAGGGGFALLLAKDAESATE 849 (873)
Q Consensus 782 ~~gd~~~lg~lm~~~~~~~~~----l~~~--vs~p~l~~l~~~a~~-----g-a~G~klsGAGgGG~v~~l~~~~~~a~~ 849 (873)
.++|++.|+++|.+++..+.. -.+. ...|...++++.+.+ | +.++.+||||+ ++++|+++ +.+++
T Consensus 233 ~~~D~~~lg~~~~~d~~~lh~~~~~~~p~~~~l~p~~~~i~~~~~~~~~~~Ga~~~a~~SGaGP--tv~~l~~~-~~~~~ 309 (380)
T 2hke_A 233 KARDFATFAEIAMLESDDLQEICATTEPKITYATEDSYAMIRLVKAYNAKKGRTALAYTFDAGA--NCFLFVLK-EDLPE 309 (380)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHHHTSSSCCCCCCHHHHHHHHHHHHHHHHHTSCCEEEECCSSS--CEEEEEEG-GGHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhhhccCCCeeEECHHHHHHHHHHHHHHHhcCCcceEEEECCCC--cEEEEECH-HHHHH
Confidence 999999999999754332221 1221 245777777776543 7 77799999998 89999975 46788
Q ss_pred HHHHHHhcC
Q 002861 850 LRRMLEKDS 858 (873)
Q Consensus 850 i~~~L~~~~ 858 (873)
+.+.|++.+
T Consensus 310 v~~~l~~~~ 318 (380)
T 2hke_A 310 AVAMLMEHF 318 (380)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 888888753
No 26
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila}
Probab=99.69 E-value=1.1e-15 Score=166.72 Aligned_cols=207 Identities=17% Similarity=0.091 Sum_probs=141.1
Q ss_pred cccCEEEEEeeccCCCCCCChHHHHHHHHH----HHHHHHhCCCC-CHHHHHHHHHHHHHHcCCCChhhhhHhhcccCee
Q 002861 629 ESMGLQIRTWANVPRGSGLGTSSILAAAVV----KALLQITDGDQ-SNENVARLVLLLEQLMGTGGGWQDQIGGLYPGIK 703 (873)
Q Consensus 629 ~~~G~~i~i~s~IP~GsGLGSSSAlavA~l----~Al~~~~g~~l-s~~eL~~la~~~E~~~g~~~G~~Dq~~~~~GG~~ 703 (873)
...|++|.++++||.++|||||||.++|++ .|+++++|.++ +++||.++|..+ +| +...++|||+.
T Consensus 89 ~~~gv~I~~~n~IP~aaGLgSSAA~~aA~~~~~~~aln~l~gl~l~s~~eL~~lA~~g-------sG--saa~si~GG~v 159 (323)
T 3lto_A 89 YVGGFLIQSSNNFPHSSGLASSASSFAALTKCASIALSELTQKPLPSIDEQAQLSRLG-------SG--SSCRSFYAPWA 159 (323)
T ss_dssp CCCCEEEEEEESSCTTTTCCCHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHTT-------CG--GGGGGGSCSEE
T ss_pred CCCCEEEEEEeCCCCccCcchhHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHh-------CC--CcchhhhCCEE
Confidence 456999999999999999999999999999 99999999999 999999998533 23 68899999998
Q ss_pred EEecCCCCcceeEEEeec-CChhhhhhcCcEEEEEE--e-CCcchHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 002861 704 FTSSFPGIPLRLQVIPLL-ASPQLILELQQRLLVVF--T-GQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRD 779 (873)
Q Consensus 704 ~~~~~~~~~~~~~v~pl~-~~~~~~~~~~~~lllv~--t-g~tr~t~~~l~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~ 779 (873)
.+.. + ..+++. ..+ +..++++. . ....+|.+..+.+ +. .+.....++.....+..+..
T Consensus 160 ~~~~--g-----~~~~l~~~~~------~l~~~v~vi~~~~~~vsT~~~~~~l-~~----~~~~~~~~~~~~~~~~~l~~ 221 (323)
T 3lto_A 160 LWTG--D-----KVSAIDLPYK------DLLHQVIVISSQEKEIPSRVAHKLV-KT----SPFYETRSERAEANLKLLLN 221 (323)
T ss_dssp EEET--T-----EEEECCCSCC------SCEEEEEECCCCTTCCCHHHHHHHG-GG----STTTTTHHHHHHHHHHHHHH
T ss_pred EEec--C-----cEEEccCCCC------CCeEEEEEECCCCCCCCCHHHHhhc-cc----ChhHHHHHHHhHHHHHHHHH
Confidence 7643 2 123332 111 23343332 2 3345677766552 21 11111122333455678999
Q ss_pred HHhccCHHHHHHHHHHHHHH----HhhhCCC--CChHHHHHHHHHH---c--cCCceEEecCCCccceeEEEeCCcchHH
Q 002861 780 ALMNCDVDELGKIMLEAWRL----HQELDPH--CSNEFVDRLFAFA---D--PYCCGYKLVGAGGGGFALLLAKDAESAT 848 (873)
Q Consensus 780 AL~~gd~~~lg~lm~~~~~~----~~~l~~~--vs~p~l~~l~~~a---~--~ga~G~klsGAGgGG~v~~l~~~~~~a~ 848 (873)
||.++|++.+++++...... .+.-.|. ...|...++++.+ + .|+.++.++|||+ ++++++++ +..+
T Consensus 222 AL~~gD~~~l~~~~~~d~~~LHa~~~~~~P~~~~l~p~s~~i~~~v~~~r~~~G~~~~~tsgAGP--nv~~l~~~-~~~~ 298 (323)
T 3lto_A 222 AFENKDWTSIYQICWHEFLDMHQLFKTCEKPFSYITDNTLHILSVIEKFWNEKGDGPVVTMDAGP--NVHLLYRS-DQTD 298 (323)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHTSSSCCCSCCHHHHHHHHHHHHHHHHHSCCCEEECCSSS--CEEEEECG-GGHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHhHHHhccCCCceecCchHHHHHHHHHHHHHhCCCeEEEEECCCC--CeEEEEec-ccHH
Confidence 99999999999987644322 2221111 2346666665555 3 3789999999999 67888875 6788
Q ss_pred HHHHHHHhcCCCceEEE
Q 002861 849 ELRRMLEKDSNFNSEVY 865 (873)
Q Consensus 849 ~i~~~L~~~~~~~v~v~ 865 (873)
++.+.|++.+.-..+|.
T Consensus 299 ~v~~~l~~~~~~~~~~~ 315 (323)
T 3lto_A 299 LARQFKSDHLVGNYDVL 315 (323)
T ss_dssp HHHHHHHHHTTTTSEEC
T ss_pred HHHHHHHHHhHhHHHHh
Confidence 99999987754444443
No 27
>3f0n_A Mevalonate pyrophosphate decarboxylase; cholesterol biosynthesis, lipid synthesis, lyase, steroid biosynthesis, sterol biosynthesis; 1.90A {Mus musculus} PDB: 3d4j_A
Probab=99.59 E-value=3e-14 Score=158.43 Aligned_cols=204 Identities=15% Similarity=0.141 Sum_probs=138.7
Q ss_pred cCEEEEEeeccCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHcCCCChhhhhHhhcccCeeEEecCC-
Q 002861 631 MGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTSSFP- 709 (873)
Q Consensus 631 ~G~~i~i~s~IP~GsGLGSSSAlavA~l~Al~~~~g~~ls~~eL~~la~~~E~~~g~~~G~~Dq~~~~~GG~~~~~~~~- 709 (873)
.|++|.++++||.++|||||||.++|++.|++++++. +++|.++|..++ | +.+.++|||++.....+
T Consensus 122 ~~~~I~~~~~iP~aaGLgSSaA~~aA~~~a~n~l~~l---~~el~~lA~~~s-------G--s~~~s~~GG~v~w~~~~~ 189 (414)
T 3f0n_A 122 YKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGV---EGDLSEVARRGS-------G--SACRSLYGGFVEWQMGEQ 189 (414)
T ss_dssp SCEEEEEEECCCGGGCCCHHHHHHHHHHHHHHHHHTC---CSCCHHHHHHHC-------G--GGGGGGSSSEEEECCCSC
T ss_pred CcEEEEEEeCCCCCcCcchhHHHHHHHHHHHHHHhCC---hHHHHHHHHHhC-------C--CcchHhhCCEEEEEeccC
Confidence 6899999999999999999999999999999999998 467888886542 2 67899999999876542
Q ss_pred --CCcceeEEEeecCChhhhhhcCcEEEEEEe---CCcchHHHHHHHHHHHHhhcCHHHHHHHHH-HHHHHHHHHHHHhc
Q 002861 710 --GIPLRLQVIPLLASPQLILELQQRLLVVFT---GQVRLAHQVLQKVVTRYLQRDNLLISSIKR-LTELAKNGRDALMN 783 (873)
Q Consensus 710 --~~~~~~~v~pl~~~~~~~~~~~~~lllv~t---g~tr~t~~~l~~v~~~~~~~~~~~~~~~~~-i~~~~~~~~~AL~~ 783 (873)
+.. ....+++.+..+ .+.+++++.. ..+.++++.++.++.. ...+...+++ ....+..+..||.+
T Consensus 190 ~d~~d--s~a~~i~~~~~w---p~L~ivvlv~~~~~K~vsST~~mr~~l~t----s~~~~~~v~~~~~~~~~~l~~AL~~ 260 (414)
T 3f0n_A 190 ADGKD--SIARQIAPEWHW---PQLRILILVVSADKKQTGSTVGMQTSVET----STLLKFRAESVVPERMKEMTRCIQE 260 (414)
T ss_dssp TTCTT--CCEEEEECTTSC---TTEEEEEEEESCCC-CCCHHHHHHHHHHH----CHHHHHHHHHTHHHHHHHHHHHHHT
T ss_pred CCCCc--eEEEEcccccCC---CCceEEEEEeCccccCCCchHHHHhhccc----CccHHHHHHHHHHHHHHHHHHHHHc
Confidence 211 122344322111 1345554443 3344566666654432 2233344555 45667789999999
Q ss_pred cCHHHHHHHHHHH----HHHHhhhCC--CCChHHHHHHHHHHcc------CCceEEecCCCccceeEEEeCCcchHHHHH
Q 002861 784 CDVDELGKIMLEA----WRLHQELDP--HCSNEFVDRLFAFADP------YCCGYKLVGAGGGGFALLLAKDAESATELR 851 (873)
Q Consensus 784 gd~~~lg~lm~~~----~~~~~~l~~--~vs~p~l~~l~~~a~~------ga~G~klsGAGgGG~v~~l~~~~~~a~~i~ 851 (873)
+|++.|++++..+ |+..+.-.| ....|...++++.+.+ |+.++.++|||+ ++++++++ +..+++.
T Consensus 261 gD~~~~g~l~e~Ds~~lHa~~~~s~P~~~yl~p~s~~ii~~v~~~r~~~~g~~~~~tsdAGP--nv~vl~~~-~~~~~v~ 337 (414)
T 3f0n_A 261 QDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNTHHGQTKVAYTFDAGP--NAVIFTLE-DTVAEFV 337 (414)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTSSSCCCCCCHHHHHHHHHHHHHHHHHTSCCEEEECCSSS--CEEEEEEH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccCCCeeeeCccHHHHHHHHHHHHHhcCCceEEEEECCCC--CEEEEEec-ccHHHHH
Confidence 9999999986644 222222111 1245776666665543 678999999999 77888874 6788899
Q ss_pred HHHHhcC
Q 002861 852 RMLEKDS 858 (873)
Q Consensus 852 ~~L~~~~ 858 (873)
+.|++.+
T Consensus 338 ~~l~~~f 344 (414)
T 3f0n_A 338 AAVRHSF 344 (414)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 9988653
No 28
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=99.39 E-value=3.5e-13 Score=153.59 Aligned_cols=228 Identities=14% Similarity=0.114 Sum_probs=146.0
Q ss_pred CCCCeeeccCCCcCcC----CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccC
Q 002861 1 MTGDVLPCFDASTMIL----PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILD 76 (873)
Q Consensus 1 ~~gD~i~~~d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~ 76 (873)
+.||+++..|+..++. .++++|++..+++.+..+.+|++.+|+++ +|..|.+||..++- ....
T Consensus 132 ~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~~g---------~v~~~~ekp~~~~~----~~~~ 198 (420)
T 3brk_X 132 LAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRMEATGFGVMHVNEKD---------EIIDFIEKPADPPG----IPGN 198 (420)
T ss_dssp EESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETTGGGGSEEEEECTTS---------BEEEEEESCSSCCC----BTTB
T ss_pred ecccEEEchHHHHHHHHHHHcCCeEEEEEeecCccccCcccEEEECCCC---------cEEEeEeCCCcccc----cccc
Confidence 3589999888877765 67899999999877778899999999877 79999999975420 1123
Q ss_pred CCccceeeceeeecchHHHHHHhhhcC----CchhhhhhhccccchhhhHHHHhhc------c-cccccccccCCCc--h
Q 002861 77 DGRALLDTGIIAVRGKAWEELVMLSCS----CPPMVSELLKSGKEMSLYEDLVAAW------V-PAKHDWLMLRPLG--K 143 (873)
Q Consensus 77 ~~~~l~~~Gi~~f~~~~~~~ll~~~~~----~~d~g~d~~~~~~~~~~y~df~~~~------~-~~~~~Y~~~~pvg--d 143 (873)
++..+..+|+|+|+.+.+.+++..... ..++..|++ +..+....-+.+.+ + +..+.||.+ ++ +
T Consensus 199 ~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~l--~~li~~g~v~~~~~~~~~~~~~~~~~~~~~d--I~t~~ 274 (420)
T 3brk_X 199 EGFALASMGIYVFHTKFLMEAVRRDAADPTSSRDFGKDII--PYIVEHGKAVAHRFADSCVRSDFEHEPYWRD--VGTID 274 (420)
T ss_dssp TTEEEEEEEEEEEEHHHHHHHHTSSCCC----------CT--THHHHHSCEEEEEHHHHBCCCTTCSSCCEEC--CCSHH
T ss_pred ccceEEeeeeEEEeHHHHHHHHHHhcccCCccccchHHHH--HHHhhhCcEEEEEeccccccccccCCCEEEE--CCCHH
Confidence 456799999999999988777753211 124444555 22121100000000 0 111458988 76 5
Q ss_pred hHHhh----hhcCcceEE------------EecCceeEEecCcHHHHhhhccCCccccccceeeecCCCcccccccceeE
Q 002861 144 ELVSK----LGKQRMFSY------------CAYELLFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVV 207 (873)
Q Consensus 144 ~~~~~----l~~~~i~~~------------~~p~a~F~h~gt~~e~l~~l~~~~~~l~~~~~~~~~~~~~~~~i~~~~~V 207 (873)
.|+.+ +...+.+.+ ..|++.+. -+ ..+....+.++.+.. +|++.++.|
T Consensus 275 d~~~a~~~ll~~~~~~~~~~~~~~i~~~~~i~~~~~i~-~~--------------~~~~~~~i~~~~ig~-~~~I~~~~i 338 (420)
T 3brk_X 275 AYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPPAKFV-HD--------------DEDRRGSAVSSVVSG-DCIISGAAL 338 (420)
T ss_dssp HHHHHHHHTTSSSCSSCTTCCSSCCCCCCCCCCCCEEE-CB--------------CSSCBCEEESCEECS-SCEEESCEE
T ss_pred HHHHHHHHHhCCCchhhcCCCCCceeeccccCCCcEEe-cc--------------cccCCcEecCCEECC-CCEEcCCEE
Confidence 56655 222211110 11121111 00 001122233555554 444478889
Q ss_pred EeeeecCCceeCCCcEEEEceeCCCeEECCCcEEeCcCCCCCCCCCccCccceeeCCCeeeeee
Q 002861 208 LSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEV 271 (873)
Q Consensus 208 ~~Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iisg~~i~~~~~~~~~~~~~~~iP~~~~i~~v 271 (873)
.+|+|+++|.|++++.|++|+|++++.||.+|.|.+++|.++ +.|++|+++..-
T Consensus 339 ~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~~~ig~~----------~~i~~~~~i~~~ 392 (420)
T 3brk_X 339 NRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSNVVIDHG----------VVIPEGLIVGED 392 (420)
T ss_dssp ESCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEECTT----------CEECTTCEESSC
T ss_pred eCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEeceEECCC----------CEECCCCEEeCC
Confidence 999999999999999999999999999999999999999887 999999866433
No 29
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.29 E-value=2.5e-12 Score=147.84 Aligned_cols=229 Identities=15% Similarity=0.159 Sum_probs=141.7
Q ss_pred CCCCeeeccCCCcCcC----CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhc---Cc
Q 002861 1 MTGDVLPCFDASTMIL----PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKN---HA 73 (873)
Q Consensus 1 ~~gD~i~~~d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~---~a 73 (873)
+.||+++.+|+..++. .++++|++..|++.+..+.+|++.+|+++ +|..|.+||..++.... ..
T Consensus 142 ~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~~~---------~v~~~~ekp~~~~~~~~~~~~~ 212 (451)
T 1yp2_A 142 LAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEG---------RIIEFAEKPQGEQLQAMKVDTT 212 (451)
T ss_dssp ECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHHHHTTSEEEEECTTS---------BEEEEEESCCHHHHHHTCCCGG
T ss_pred ecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChhhcccCCEEEECCCC---------CEEEEEECCCchhhcccccccc
Confidence 4699999888877775 67899999999887778899999999776 79999999987642210 00
Q ss_pred -c------cCCCccceeeceeeecchHHHHHHhhhc-CCchhhhhhhccccchhhhHHHHhhccc-ccccccccCCCc--
Q 002861 74 -I------LDDGRALLDTGIIAVRGKAWEELVMLSC-SCPPMVSELLKSGKEMSLYEDLVAAWVP-AKHDWLMLRPLG-- 142 (873)
Q Consensus 74 -~------~~~~~~l~~~Gi~~f~~~~~~~ll~~~~-~~~d~g~d~~~~~~~~~~y~df~~~~~~-~~~~Y~~~~pvg-- 142 (873)
+ ......++++|+|+|+.+++.+++.... ...+++.+++ +..+.. ...... ..+.||.+ +|
T Consensus 213 ~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~l--~~~i~~----g~~v~~~~~~~~w~d--igt~ 284 (451)
T 1yp2_A 213 ILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPGANDFGSEVI--PGATSL----GMRVQAYLYDGYWED--IGTI 284 (451)
T ss_dssp GGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTTCCCTTTTHH--HHHHHT----TCCEEEEECCSCCEE--CSSH
T ss_pred ccccccccccCCcceEEeeEEEEcHHHHHHHHHhhcccccchHhhHH--HHHHhc----CCceEEEEeCCEEEE--CCCH
Confidence 0 0113468899999999999888776431 1233444443 111110 000111 22458988 76
Q ss_pred hhHHhh---hhcCcceEEEecCceeEEe----cCcHHHHhhhccCCccccccceeeecCCCcccccccceeEEeeeecCC
Q 002861 143 KELVSK---LGKQRMFSYCAYELLFLHF----GTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHG 215 (873)
Q Consensus 143 d~~~~~---l~~~~i~~~~~p~a~F~h~----gt~~e~l~~l~~~~~~l~~~~~~~~~~~~~~~~i~~~~~V~~Svl~~~ 215 (873)
+.|+++ +.... .++..++|- ++.. .......+ ....+.++.+.. +|.+.++.|.+|+|+.+
T Consensus 285 ~~l~~a~~~l~~~~-----~~~~~~~~~~~~i~~~~-----~i~~~~~i-~~~~I~~~~Ig~-~~~I~~~~i~~~~Ig~~ 352 (451)
T 1yp2_A 285 EAFYNANLGITKKP-----VPDFSFYDRSAPIYTQP-----RYLPPSKM-LDADVTDSVIGE-GCVIKNCKIHHSVVGLR 352 (451)
T ss_dssp HHHHHHHHGGGCSS-----SCSSCSCCSSSCCCCCC-----CCCCCEEE-EEEEEEEEEECT-TCEEEEEEEESCEECTT
T ss_pred HHHHHHHHHHhccc-----ccchhccCCCCeeccCC-----ccCCCeEE-cceEEeCeEECC-CCEEcceEEeccEECCC
Confidence 566665 11110 011112110 0100 00000000 001122344443 34444466778999999
Q ss_pred ceeCCCcEEEEceeCCC-------------------eEECCCcEEeCcCCCCCCCCCccCccceeeCCCeee
Q 002861 216 VSIGEDSLIYDSNISSG-------------------IQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCL 268 (873)
Q Consensus 216 v~v~~~s~Ve~s~l~~~-------------------v~IG~~~iisg~~i~~~~~~~~~~~~~~~iP~~~~i 268 (873)
|.|++++.|++|++.++ +.||.+|.|.+++|.++ +.|.+|+++
T Consensus 353 ~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~----------~~IG~~~~i 414 (451)
T 1yp2_A 353 SCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKN----------ARIGDNVKI 414 (451)
T ss_dssp CEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTT----------CEECTTCEE
T ss_pred CEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCC----------cEECCCCEE
Confidence 99999999999999888 89999999999998877 888888755
No 30
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=98.85 E-value=5.6e-10 Score=125.09 Aligned_cols=69 Identities=9% Similarity=0.041 Sum_probs=49.3
Q ss_pred CCeeecc--CCCcCcC-CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccCCCc
Q 002861 3 GDVLPCF--DASTMIL-PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGR 79 (873)
Q Consensus 3 gD~i~~~--d~~~~~~-~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~~~ 79 (873)
|||+|+| |+++|.. -+ +|+.+ .+.++.+||..+|..+++ +| .|++||+.++ ..
T Consensus 18 ~dhiy~m~~~l~~i~~~h~--~tl~g----~~~~~~~Gv~~ld~a~~g-------~I-~F~ekPk~~~----------~~ 73 (374)
T 2iu8_A 18 GSHMSQSTYSLEQLADFLK--VEFQG----NGATLLSGVEEIEEAKTA-------HI-TFLDNEKYAK----------HL 73 (374)
T ss_dssp ---CCSCCEEHHHHHHHTT--CEEES----CTTCEECEECCTTTCCTT-------EE-EECCSSSTHH----------HH
T ss_pred ccccccCcCcHHHHHHhhC--CEEEC----CCcceEEEEeccccCCCC-------eE-EEEeCchhhh----------hh
Confidence 8999999 8888877 33 46654 346778999999965432 46 9999998653 24
Q ss_pred cceeeceeeecchHHH
Q 002861 80 ALLDTGIIAVRGKAWE 95 (873)
Q Consensus 80 ~l~~~Gi~~f~~~~~~ 95 (873)
.+++||+|+|+++.+.
T Consensus 74 ~~~~aGiyI~~~~~l~ 89 (374)
T 2iu8_A 74 KSSEAGAIIISRTQFQ 89 (374)
T ss_dssp HTCCCSEEEEEHHHHH
T ss_pred hcCCcEEEEeChhHhh
Confidence 5789999999988764
No 31
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.40 E-value=2.6e-07 Score=106.26 Aligned_cols=80 Identities=15% Similarity=0.206 Sum_probs=57.1
Q ss_pred CCCe--eeccCCCcCcC----CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCccc
Q 002861 2 TGDV--LPCFDASTMIL----PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAIL 75 (873)
Q Consensus 2 ~gD~--i~~~d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~ 75 (873)
.||+ +...++..++. .++++++.+.+.+ ..+.+|++..|+++ +|..|.+||...+ .
T Consensus 109 ~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~--~~~~~g~v~~d~~g---------~v~~~~ek~~~~~-------~ 170 (468)
T 1hm9_A 109 AGDTPLITGESLKNLIDFHINHKNVATILTAETD--NPFGYGRIVRNDNA---------EVLRIVEQKDATD-------F 170 (468)
T ss_dssp ETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS--CCTTSCEEEECTTC---------CEEEEECTTTCCT-------T
T ss_pred eCCccccCHHHHHHHHHHHHhcCCcEEEEEeccC--CCCceeEEEECCCC---------CEEEEEECCCCCh-------H
Confidence 4566 44455555544 5788999888764 35679999999877 7999999985321 0
Q ss_pred CCCccceeeceeeecchHHHHHHh
Q 002861 76 DDGRALLDTGIIAVRGKAWEELVM 99 (873)
Q Consensus 76 ~~~~~l~~~Gi~~f~~~~~~~ll~ 99 (873)
.+...+..+|+|+|+.+.+.+++.
T Consensus 171 ~~~~~~~~~Giy~f~~~~l~~~l~ 194 (468)
T 1hm9_A 171 EKQIKEINTGTYVFDNERLFEALK 194 (468)
T ss_dssp GGGCCEEEEEEEEEEHHHHHHHHT
T ss_pred HhcCeEEEEEEEEEEHHHHHHHHH
Confidence 113458899999999998877765
No 32
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=98.33 E-value=9.2e-07 Score=101.31 Aligned_cols=65 Identities=23% Similarity=0.393 Sum_probs=48.0
Q ss_pred CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccCCCccceeeceeeecchHHHH
Q 002861 17 PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEE 96 (873)
Q Consensus 17 ~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~~~~l~~~Gi~~f~~~~~~~ 96 (873)
.++++++.+.+.. ....+|++..| ++ +|..|.+||...+ ..+...+..+|+|+|+.+.+.+
T Consensus 125 ~~~~~~~~~~~~~--~~~~~g~v~~~-~g---------~v~~~~ek~~~~~-------~~~~~~~~~~Giy~~~~~~l~~ 185 (459)
T 4fce_A 125 PEGGIGLLTVKLD--NPSGYGRIVRE-NG---------DVVGIVEHKDASD-------AQREINEINTGILVANGRDLKR 185 (459)
T ss_dssp CTTSEEEEEEECS--CCTTSCEEEEE-TT---------EEEEEECGGGCCT-------TGGGCCEEEEEEEEEEHHHHHH
T ss_pred hhCCEEEEEEecC--CCCcccEEEeC-CC---------cEEEEEECCCCCh-------HHhhccEEEEEEEEEEHHHHHH
Confidence 4478888887753 34679999887 55 7999999985432 1123457899999999999988
Q ss_pred HHhh
Q 002861 97 LVML 100 (873)
Q Consensus 97 ll~~ 100 (873)
++..
T Consensus 186 ~l~~ 189 (459)
T 4fce_A 186 WLSL 189 (459)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8763
No 33
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=98.28 E-value=1.7e-06 Score=97.35 Aligned_cols=211 Identities=15% Similarity=0.180 Sum_probs=113.2
Q ss_pred CCCeeec--cCCCcCcCCCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccCCCc
Q 002861 2 TGDVLPC--FDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGR 79 (873)
Q Consensus 2 ~gD~i~~--~d~~~~~~~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~~~ 79 (873)
.||+++. .++..++. .++.++++.|++- ...+|+++.++++ +|..|.+||..+ ..
T Consensus 97 ~~D~~~~~~~~~~~l~~-~~~~~i~~~~~~~--~~~~~~v~~~~~g---------~v~~~~ek~~~~-----------~~ 153 (401)
T 2ggo_A 97 YGDLFFSNEKEICNIIT-LKENAIIGVKVSN--PKDYGVLVLDNQN---------NLSKIIEKPEIP-----------PS 153 (401)
T ss_dssp ETTEEESCSHHHHHHTT-CSSEEEEEEECSC--CSSSCEEEECTTS---------SEEEEECSCSSC-----------SC
T ss_pred eCccccccHHHHHHHHH-hcCCEEEEEEcCC--CcceeEEEECCCC---------eEEEEEECCCCC-----------CC
Confidence 5788765 45555554 5788888888643 4568999988776 789999999543 34
Q ss_pred cceeeceeeecchHHHHHHhhhcCCchhhhhhhccccchhhhHHHHhhc--c----c-ccccccccCCCc--hhHHhh--
Q 002861 80 ALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSLYEDLVAAW--V----P-AKHDWLMLRPLG--KELVSK-- 148 (873)
Q Consensus 80 ~l~~~Gi~~f~~~~~~~ll~~~~~~~d~g~d~~~~~~~~~~y~df~~~~--~----~-~~~~Y~~~~pvg--d~~~~~-- 148 (873)
.+..+|+|+|+.+++.. +.... ... ..++++ .|++..+ + . ..+.||.| ++ +.|..+
T Consensus 154 ~~~~~Giy~~~~~~~~~-l~~~~-~~~--------~~~~~~-~~~~~~~~~g~~v~~~~~~~~~~d--I~t~edl~~a~~ 220 (401)
T 2ggo_A 154 NLINAGIYKLNSDIFTY-LDKIS-ISE--------RGELEL-TDAINLMAKDHRVKVIEYEGYWMD--IGKPWNIIDVNK 220 (401)
T ss_dssp SEEEEEEEEEETHHHHH-HHHSC-CCS--------SSCBCH-HHHHHHHHHHSCEEEEECCSCEEE--CCSHHHHHHHHH
T ss_pred cEEEEEEEEEcHHHHHH-hhhcC-cCC--------CCceEH-HHHHHHHHCCCcEEEEEecceEEc--CCCHHHHHHHHH
Confidence 58899999999998754 43211 000 001111 1322222 1 1 22347877 64 334333
Q ss_pred --hhcC--cceEEEecCceeE----EecCcHHHHhhhccCCccccccceee-ecCCCcccccccceeEE-eeeecCCcee
Q 002861 149 --LGKQ--RMFSYCAYELLFL----HFGTSSEVLDHLSGDVSGLVGRRHLC-SIPATTVSDIAASAVVL-SSKIAHGVSI 218 (873)
Q Consensus 149 --l~~~--~i~~~~~p~a~F~----h~gt~~e~l~~l~~~~~~l~~~~~~~-~~~~~~~~~i~~~~~V~-~Svl~~~v~v 218 (873)
+... |.......++-.+ ++|. ...++....+. +..+..++.|..++.|. +++|+.+|.|
T Consensus 221 ~l~~~~~~~~~~~~i~~~~~i~~~~~ig~-----------~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~i 289 (401)
T 2ggo_A 221 WALDNLVFSQNLGNVEDNVKIKGKVIIEE-----------DAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKI 289 (401)
T ss_dssp HHHHHTCCCEECSEECSSCEEESCEEECT-----------TCEECTTCEEESSEEECTTCEECSSCEECTTEEECSSCEE
T ss_pred HHHHhcccccccceeCCCCEEcCCeEEcC-----------CCEECCCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEE
Confidence 1211 1110011111111 1111 00011011010 11122222232343332 4777788888
Q ss_pred CCCcEEEEceeCCCeEECCCcEEeCcCCCCCCCCCccCccceeeCCCeeee
Q 002861 219 GEDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLW 269 (873)
Q Consensus 219 ~~~s~Ve~s~l~~~v~IG~~~iisg~~i~~~~~~~~~~~~~~~iP~~~~i~ 269 (873)
++++.|.+|+|++++.||.+|.|.+++|..+ +.|.+++++.
T Consensus 290 g~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~----------~~Ig~~~~i~ 330 (401)
T 2ggo_A 290 GASVEVKESVIMEGSKIPHLSYVGDSVIAED----------VNFGAGTLIA 330 (401)
T ss_dssp EETCEEESEEECTTCEEEESCEEESCEECTT----------CEECTTCEEC
T ss_pred CCCCEEecCEEcCCcEECCCceEcceEECCC----------cEECCCcEEc
Confidence 8888888888888888888888887777766 6676666553
No 34
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=98.22 E-value=2.1e-07 Score=106.95 Aligned_cols=220 Identities=11% Similarity=0.019 Sum_probs=115.5
Q ss_pred eeeccCCCcCcC--CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccCCCccce
Q 002861 5 VLPCFDASTMIL--PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALL 82 (873)
Q Consensus 5 ~i~~~d~~~~~~--~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~~~~l~ 82 (873)
++||||+..-.. .++++|++..++|+++|.. +..+|++.. +. +|.+|.|||..+.- -.. ..++
T Consensus 97 ~~Yk~d~~~d~~~~~g~~vt~~~~~~pL~~a~~--i~~~d~~~~--~t----~V~~~~~kpd~~~~----~~l---~~l~ 161 (496)
T 3c8v_A 97 ALYKSDIRGDELKRKGQHFVCDGKMIPLHDDEV--ITIKDSFLN--KT----LVHSNSHDPESPEE----FTI---RNTV 161 (496)
T ss_dssp EEESCEEECTTCCCTTCEEEETTEEEECSSCCE--EEEESCEEE--SC----EEESCCCCTTCTTE----EEE---ESCE
T ss_pred eeeeehhhHHHHhhcCCEEEEEecccchhHhhh--HHhhhhcCC--ce----EEeccccCCCCccc----cch---HHHH
Confidence 589999876333 8899999999999999887 888887641 11 68889999988750 001 1123
Q ss_pred ee-----------ceee--ecc---hHHHHHHhhhcCCchhhhhhhcc---ccch--------h-hh---HHHHhhccc-
Q 002861 83 DT-----------GIIA--VRG---KAWEELVMLSCSCPPMVSELLKS---GKEM--------S-LY---EDLVAAWVP- 130 (873)
Q Consensus 83 ~~-----------Gi~~--f~~---~~~~~ll~~~~~~~d~g~d~~~~---~~~~--------~-~y---~df~~~~~~- 130 (873)
+| |+|+ |++ ..+.+.|..++ .--+++++.+. |..+ . .| ..++..+..
T Consensus 162 ~~h~~~~~g~~~~~~~ig~~~ti~L~~l~d~li~~~-~~~~~g~i~~~~~~pg~~~i~~~~~lnf~Y~f~~~~L~~~l~~ 240 (496)
T 3c8v_A 162 AMPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYF-SYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQ 240 (496)
T ss_dssp ECTTCEEESCCEESCEECTTCEEESCEEESCEECTT-CEEESSEEESCEECTTEEEEECTTSEEEEEECCHHHHTTTCBC
T ss_pred HHHHHhhcCCcccceEecccceeeHHHHHHHHHHHH-hhhcCCceEEeeecCCceecccccccceEEEcCHHHHHHHHhh
Confidence 33 7777 666 33222222111 01123333322 1111 0 00 011111110
Q ss_pred ----ccccccccC--CCchhHHhhhhcCcc-eEEEecCceeEEecCcHHHHhhhccCCccccccceeeecCCCccccccc
Q 002861 131 ----AKHDWLMLR--PLGKELVSKLGKQRM-FSYCAYELLFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAA 203 (873)
Q Consensus 131 ----~~~~Y~~~~--pvgd~~~~~l~~~~i-~~~~~p~a~F~h~gt~~e~l~~l~~~~~~l~~~~~~~~~~~~~~~~i~~ 203 (873)
....+|.|. ...+.+|+.+..... .....+++.+++-+. .+ .-+..+..++.|..
T Consensus 241 ~~~~n~~g~~~Dll~~~~~d~~~i~~~~~~~~~~~I~~~a~I~p~a-------------~i-----~g~v~IG~~~~I~~ 302 (496)
T 3c8v_A 241 EAGSCPTGVLMEFVEVRQEDFEEVFASGHMASGAGSASGASVSGYA-------------VI-----KGDTVIGENVLVSQ 302 (496)
T ss_dssp CTTSCCBSHHHHHHHTTTHHHHHHHHC--------CCTTCEECTTS-------------EE-----ESSCEECTTCEECT
T ss_pred ccCccccceeeehhccchHHHHHHhhccccccCcccCCCcEECCCc-------------EE-----eCCeEECCCCEECC
Confidence 001122220 001234443322110 012223344443111 00 00112222234555
Q ss_pred ceeEEeeeecCCceeCCCcEEEEceeCCCeEECCCcEEeCcCCCCCCCCCccCccceeeCCCeee
Q 002861 204 SAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCL 268 (873)
Q Consensus 204 ~~~V~~Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iisg~~i~~~~~~~~~~~~~~~iP~~~~i 268 (873)
++.|-+++|+.+|.|+++++|.+|+|++++.||.+|+|.++.|..+ +.|.+++.+
T Consensus 303 ~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~----------v~IG~~a~I 357 (496)
T 3c8v_A 303 RAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDM----------IFTGFNSFL 357 (496)
T ss_dssp TCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEET----------CEECTTCEE
T ss_pred CcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCC----------cEECCCCEE
Confidence 6667788888888888888888888888888888888888888776 777777654
No 35
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=98.19 E-value=2e-06 Score=98.51 Aligned_cols=78 Identities=18% Similarity=0.350 Sum_probs=52.4
Q ss_pred CCe--eeccCCCcCcC--CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccCCC
Q 002861 3 GDV--LPCFDASTMIL--PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDG 78 (873)
Q Consensus 3 gD~--i~~~d~~~~~~--~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~~ 78 (873)
||+ +...++..++. .++++++++.+.+- ...+|++..| ++ +|..|.+||...+-. +.
T Consensus 104 ~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~--~~~~g~v~~~-~g---------~v~~~~ek~~~~~~~-------~~ 164 (456)
T 2v0h_A 104 GDAPLITKETLEKLIEAKPENGIALLTVNLDN--PTGYGRIIRE-NG---------NVVAIVEQKDANAEQ-------LN 164 (456)
T ss_dssp TTCTTCCHHHHHHHHHHCCTTSEEEEEEECSS--CTTSCEEEEE-TT---------EEEEEECTTTCCHHH-------HT
T ss_pred CCcceeCHHHHHHHHHHHhcCCEEEEEeecCC--CCccceEEEc-CC---------cEEEEEECCCCChhH-------hc
Confidence 555 33334444433 23788888877643 4569998887 55 789999998742211 13
Q ss_pred ccceeeceeeecchHHHHHHh
Q 002861 79 RALLDTGIIAVRGKAWEELVM 99 (873)
Q Consensus 79 ~~l~~~Gi~~f~~~~~~~ll~ 99 (873)
..+..+|+|+|+.+.+.+++.
T Consensus 165 ~~~~~~Giy~~~~~~l~~~l~ 185 (456)
T 2v0h_A 165 IKEVNTGVMVSDGASFKKWLA 185 (456)
T ss_dssp CCEEEEEEEEEEHHHHHHHHT
T ss_pred CcEEEEEEEEEEHHHHHHHHH
Confidence 458899999999998877775
No 36
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.11 E-value=5.4e-06 Score=96.33 Aligned_cols=67 Identities=15% Similarity=0.141 Sum_probs=54.0
Q ss_pred CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccCCCccceeeceeeecchHHHH
Q 002861 17 PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEE 96 (873)
Q Consensus 17 ~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~~~~l~~~Gi~~f~~~~~~~ 96 (873)
.++++|+++.++ +..+.+|+++.|+++ +|..|.|||..++-. ....++.+|+|+|+.+.+.+
T Consensus 139 ~~~~~ti~~~~~--~dp~~yG~i~~~~~g---------~v~~ivEk~~~~~~~-------~~i~~in~Giy~f~~~~l~~ 200 (501)
T 3st8_A 139 VSAAVTVLTTTL--DDPFGYGRILRTQDH---------EVMAIVEQTDATPSQ-------REIREVNAGVYAFDIAALRS 200 (501)
T ss_dssp TTCSEEEEEEEC--SCCTTSCEEEECTTC---------CEEEEECGGGCCHHH-------HHCCEEEEEEEEEEHHHHHH
T ss_pred ccccceEeeecc--CCchhccccccccce---------eEEeeccccCCChhh-------ccceeeeceeeeecchhHHH
Confidence 689999999876 467899999999998 899999998753211 12347899999999999999
Q ss_pred HHhhh
Q 002861 97 LVMLS 101 (873)
Q Consensus 97 ll~~~ 101 (873)
++...
T Consensus 201 ~l~~l 205 (501)
T 3st8_A 201 ALSRL 205 (501)
T ss_dssp HHTTC
T ss_pred hhhhh
Confidence 88743
No 37
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=96.46 E-value=0.0074 Score=68.05 Aligned_cols=59 Identities=15% Similarity=0.132 Sum_probs=51.7
Q ss_pred ceeEEeeeecCCceeCCCcEEEEceeCCCeEECCCcEEeCcCCCCCCCCCccCccceeeCCCeeeeeeee
Q 002861 204 SAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPL 273 (873)
Q Consensus 204 ~~~V~~Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iisg~~i~~~~~~~~~~~~~~~iP~~~~i~~v~l 273 (873)
++.|.++.|+++|.| +++.|++|+|+++|.||.+|.|.+++|..+ +.|.+|++|..+-+
T Consensus 319 ~~~i~~~~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~----------~~i~~~~~i~~~~i 377 (420)
T 3brk_X 319 RGSAVSSVVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPS----------VKIGRHAQLSNVVI 377 (420)
T ss_dssp BCEEESCEECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTT----------CEECTTCEEEEEEE
T ss_pred CcEecCCEECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCC----------CEECCCCEEeceEE
Confidence 556678999999999 899999999999999999999999999877 88999887755444
No 38
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=96.33 E-value=0.0059 Score=62.16 Aligned_cols=40 Identities=18% Similarity=0.363 Sum_probs=21.0
Q ss_pred eeecCCceeCCCcEEEEceeCCCeEECCCcEEeCcCCCCC
Q 002861 210 SKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iisg~~i~~~ 249 (873)
++|+.+|.|+.+++|.+++|++++.||.+++|.++.|..+
T Consensus 130 v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V~~~~i~~~ 169 (213)
T 3kwd_A 130 AYIGDGCFIGFRSTVFNARVGAGCVVMMHVLIQDVEIPPG 169 (213)
T ss_dssp EEECTTCEECTTCEEEEEEECTTCEECSSCEEESCEECTT
T ss_pred CEECCCCEECCCCEEeCcEECCCCEEcCCCEECCcEeCCC
Confidence 4555555555555555555555555555555554444443
No 39
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=96.03 E-value=0.0015 Score=70.49 Aligned_cols=88 Identities=7% Similarity=0.119 Sum_probs=59.4
Q ss_pred CCCCeeeccC-CCcCcC-------CCCceEEEEEecCc---cc-cccceEEEeCCCCCcccccccccccceeecCCHHHH
Q 002861 1 MTGDVLPCFD-ASTMIL-------PEDASCIITVPITL---DI-ASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDEL 68 (873)
Q Consensus 1 ~~gD~i~~~d-~~~~~~-------~~a~vtv~a~p~~~---~~-a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l 68 (873)
+.||+++..| +.+|+. +++++|+++.+++- .+ +.++||+++|+++ +|..|.|||..++-
T Consensus 121 ~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~G~v~~d~~g---------~v~~i~Ekp~~~~~ 191 (303)
T 3pnn_A 121 INADDFYGRNGFEVLARKLMTLEGKQGEYCMVGYRVGNTLSESGGVSRGVCQVDEKH---------LLTGVVERTGIERT 191 (303)
T ss_dssp EESSCBCCHHHHHHHHHHHHTTTTCSSEEEEEEEEGGGSCBTTBCEEEEEEEECTTS---------BEEEEEEEEEEEEE
T ss_pred EECCeecCHHHHHHHHHHHHHhccccCceEEEEEECCCccCccCceeeeeEeeCCCC---------cEEEEEECCCCccc
Confidence 3689999886 665654 35889999998742 22 2235899999887 89999999975310
Q ss_pred hh-------cCc-ccCCCccceeeceeeecchHHHHH
Q 002861 69 AK-------NHA-ILDDGRALLDTGIIAVRGKAWEEL 97 (873)
Q Consensus 69 ~~-------~~a-~~~~~~~l~~~Gi~~f~~~~~~~l 97 (873)
.+ .+. ..-+...+++||+|+|+.+.+..+
T Consensus 192 ~~~~~~~~~~g~~~~~~~~~~i~~GiY~f~~~~~~~l 228 (303)
T 3pnn_A 192 DGTISFRDETGKICTLAEDAPVSMNMWGFTPDYFDYS 228 (303)
T ss_dssp TTEEEEECTTSCEEEECTTCEEEEEEEEECTHHHHHH
T ss_pred cccccccccccccccCCCCCEEEEEEEEECHHHHHHH
Confidence 00 000 000245689999999999986544
No 40
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=95.94 E-value=0.0027 Score=68.57 Aligned_cols=85 Identities=13% Similarity=0.142 Sum_probs=61.5
Q ss_pred CCCCeee-ccC-CCcCcC-------CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhc
Q 002861 1 MTGDVLP-CFD-ASTMIL-------PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKN 71 (873)
Q Consensus 1 ~~gD~i~-~~d-~~~~~~-------~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~ 71 (873)
+.||+++ ..+ +.+++. .++++|+...|... .+.+|++.+|+++ +|..|.+||..++-++
T Consensus 110 ~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~--~~~~g~i~~d~~~---------~V~~~~Ekp~~~~~~~- 177 (308)
T 2qh5_A 110 TPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSIDKP--NTEFGYIESPNGL---------DVKRFIEKPSLDKAIE- 177 (308)
T ss_dssp EESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECSSC--CTTSEEEECSSSS---------BCSEEEESCCHHHHHH-
T ss_pred EcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecCCC--CCCceEEEECCCC---------EEEEEEECCChHHHHH-
Confidence 3589887 566 555543 46788888887644 4779999988666 7999999998754221
Q ss_pred CcccCCCccceeeceeeecchHHHHHHh
Q 002861 72 HAILDDGRALLDTGIIAVRGKAWEELVM 99 (873)
Q Consensus 72 ~a~~~~~~~l~~~Gi~~f~~~~~~~ll~ 99 (873)
...++..+..+|+|+|+.+.+.+.+.
T Consensus 178 --~~~~g~~~~n~Giy~~~~~~ll~~l~ 203 (308)
T 2qh5_A 178 --FQKSGGFYFNSGMFVFQAGVFLDELK 203 (308)
T ss_dssp --HHHHCCEEEEEEEEEEEHHHHHHHHH
T ss_pred --HhhcCCeEEEeEEEEEEHHHHHHHHH
Confidence 11235678999999999998766665
No 41
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=95.93 E-value=0.0039 Score=66.18 Aligned_cols=81 Identities=22% Similarity=0.288 Sum_probs=61.0
Q ss_pred CCCCeeeccC-----CCcCcC----CCCceEEEEEecCccccccceEEEeCC--CCCcccccccccccceeecCCHHHHh
Q 002861 1 MTGDVLPCFD-----ASTMIL----PEDASCIITVPITLDIASNHGVIVAAK--DGILNENYALSLVDDLLQKPNVDELA 69 (873)
Q Consensus 1 ~~gD~i~~~d-----~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d~--~~~~~~~~~~~~v~~fl~KPs~~~l~ 69 (873)
+.||+++..| +.+|+. .++ +++...+++.+..+.+|++..|+ ++ .+ +|..|.+||..++
T Consensus 127 ~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g----~~---~v~~~~Ekp~~~~-- 196 (281)
T 3juk_A 127 ILADDLCISHDHPSVLKQMTSLYQKYQC-SIVAIEEVALEEVSKYGVIRGEWLEEG----VY---EIKDMVEKPNQED-- 196 (281)
T ss_dssp ECTTEEEECTTSCCHHHHHHHHHHHHCS-CEEEEEECCTTTGGGSEEEEEEEEETT----EE---EEEEEEESCCTTT--
T ss_pred EeCCeeccCccchHHHHHHHHHHHHcCC-CEEEEEEechhhcccCCEEEeccCCCC----ce---EEeEEEECcCCCC--
Confidence 4699999998 666665 455 77777788888899999999985 33 01 5899999997432
Q ss_pred hcCcccCCCccceeeceeeecchHHHHHHh
Q 002861 70 KNHAILDDGRALLDTGIIAVRGKAWEELVM 99 (873)
Q Consensus 70 ~~~a~~~~~~~l~~~Gi~~f~~~~~~~ll~ 99 (873)
+...++.+|+|+|+.+.+ +.+.
T Consensus 197 -------~~~~~~~~GiYi~~~~~l-~~l~ 218 (281)
T 3juk_A 197 -------APSNLAVIGRYILTPDIF-EILS 218 (281)
T ss_dssp -------CSCSEEEEEEEEECTTHH-HHHH
T ss_pred -------CCcceeEEEEEEECHHHH-HHHH
Confidence 134578999999999877 4454
No 42
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=95.68 E-value=0.0074 Score=63.70 Aligned_cols=75 Identities=15% Similarity=0.206 Sum_probs=58.8
Q ss_pred CCCCeeeccCCCcCcC----CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccC
Q 002861 1 MTGDVLPCFDASTMIL----PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILD 76 (873)
Q Consensus 1 ~~gD~i~~~d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~ 76 (873)
+.||+++..|+..++. +++++++++.+++ ..+.+|++..|+ + +|..|.+||..+
T Consensus 129 ~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~~g~v~~d~-g---------~v~~~~ekp~~~---------- 186 (269)
T 4ecm_A 129 ILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVD--DPERFGVANIQN-R---------KIIEIEEKPKEP---------- 186 (269)
T ss_dssp EETTEEESSCSHHHHHHHHTSSSSEEEEEEECS--CGGGSEEEEEET-T---------EEEEEEESCSSC----------
T ss_pred EeCCccCccCHHHHHHHHHhcCCCeEEEEEECC--CCCCceEEEEcC-C---------EEEEEEECCCCC----------
Confidence 3589999888877765 6789999998775 356899999884 5 799999999433
Q ss_pred CCccceeeceeeecchHHHHHHh
Q 002861 77 DGRALLDTGIIAVRGKAWEELVM 99 (873)
Q Consensus 77 ~~~~l~~~Gi~~f~~~~~~~ll~ 99 (873)
...++.+|+|+|+.+.+ +.+.
T Consensus 187 -~~~~~~~Giy~~~~~~l-~~l~ 207 (269)
T 4ecm_A 187 -KSSYAVTGIYLYDSKVF-SYIK 207 (269)
T ss_dssp -SCSEEEEEEEEECTTHH-HHHT
T ss_pred -CCcEEEEEEEEECHHHH-Hhhh
Confidence 35588999999999977 4443
No 43
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=95.59 E-value=0.0092 Score=61.94 Aligned_cols=41 Identities=12% Similarity=0.317 Sum_probs=24.2
Q ss_pred eeeecCCceeCCCcEEEE---------ceeCCCeEECCCcEE-eCcCCCCC
Q 002861 209 SSKIAHGVSIGEDSLIYD---------SNISSGIQIGSLSIV-VGTNFPEE 249 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~---------s~l~~~v~IG~~~ii-sg~~i~~~ 249 (873)
+++|+.+|.|+++++|.+ ++|++++.||.+|+| .++.|.++
T Consensus 139 ~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~ 189 (240)
T 3r8y_A 139 RATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKG 189 (240)
T ss_dssp TCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTTCEECTT
T ss_pred CCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCCcEECCC
Confidence 455555555666665555 566666666666666 55555554
No 44
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=95.55 E-value=0.014 Score=58.27 Aligned_cols=39 Identities=18% Similarity=0.395 Sum_probs=29.2
Q ss_pred eecCCceeCCCcEEE------EceeCCCeEECCCcEEeCcCCCCC
Q 002861 211 KIAHGVSIGEDSLIY------DSNISSGIQIGSLSIVVGTNFPEE 249 (873)
Q Consensus 211 vl~~~v~v~~~s~Ve------~s~l~~~v~IG~~~iisg~~i~~~ 249 (873)
+|+.+|.|+++++|. +|+|++++.||.+|+|.++.|..+
T Consensus 74 ~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~ 118 (191)
T 3ixc_A 74 EVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNN 118 (191)
T ss_dssp EECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTT
T ss_pred EECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCC
Confidence 677777777777776 677777777777777777777665
No 45
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=95.46 E-value=0.021 Score=56.02 Aligned_cols=40 Identities=10% Similarity=0.251 Sum_probs=25.6
Q ss_pred eeecCCceeCCCcEEE-----EceeCCCeEECCCcEEeCcCCCCC
Q 002861 210 SKIAHGVSIGEDSLIY-----DSNISSGIQIGSLSIVVGTNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-----~s~l~~~v~IG~~~iisg~~i~~~ 249 (873)
++|+.+|.|+++++|. +++|++++.||.+|.|.++.|..+
T Consensus 52 v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~ 96 (173)
T 1xhd_A 52 TIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKD 96 (173)
T ss_dssp EEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTT
T ss_pred EEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCC
Confidence 4666666666666666 566666666666666666665554
No 46
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=95.33 E-value=0.018 Score=57.10 Aligned_cols=39 Identities=15% Similarity=0.280 Sum_probs=21.3
Q ss_pred eecCCceeCCCcEE------------EEceeCCCeEECCCcEEeCcCCCCC
Q 002861 211 KIAHGVSIGEDSLI------------YDSNISSGIQIGSLSIVVGTNFPEE 249 (873)
Q Consensus 211 vl~~~v~v~~~s~V------------e~s~l~~~v~IG~~~iisg~~i~~~ 249 (873)
+|+.+|.|++++.| .+++|++++.||.+|+|.++.|.++
T Consensus 56 ~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~ 106 (187)
T 3r3r_A 56 AIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNR 106 (187)
T ss_dssp EECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCEECSS
T ss_pred EECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcEECCC
Confidence 55555555555555 4455555555555555555555444
No 47
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=95.31 E-value=0.021 Score=55.94 Aligned_cols=60 Identities=15% Similarity=0.287 Sum_probs=47.7
Q ss_pred cccccceeEE-----eeeecCCceeCCCcEEEEceeCCCeEECCCcEEe-CcCCCCCCCCCccCccceeeCCCeee
Q 002861 199 SDIAASAVVL-----SSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVV-GTNFPEEAGSTAEDSFRFMLPDRHCL 268 (873)
Q Consensus 199 ~~i~~~~~V~-----~Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iis-g~~i~~~~~~~~~~~~~~~iP~~~~i 268 (873)
+.|..++.|. +++|+.+|.|++++.|..|+|++++.||.+|+|. ++.|.++ +.|..++++
T Consensus 58 ~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~----------~~Ig~~s~V 123 (173)
T 1xhd_A 58 VNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMGSIILDGAEIGEG----------AFIGAGSLV 123 (173)
T ss_dssp CEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTCEECTTCEECTTCEECTT----------CEECTTCEE
T ss_pred CEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCCEEcCCCEEcCCCEECCC----------CEECCCCEE
Confidence 4455566665 6899999999999999999999999999999987 5777665 556666543
No 48
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=95.30 E-value=0.015 Score=58.17 Aligned_cols=50 Identities=24% Similarity=0.307 Sum_probs=42.0
Q ss_pred eeeecCCceeCCCcEEEEceeCCCeEECCCcEEeC-cCCCCCCCCCccCccceeeCCCeee
Q 002861 209 SSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVG-TNFPEEAGSTAEDSFRFMLPDRHCL 268 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iisg-~~i~~~~~~~~~~~~~~~iP~~~~i 268 (873)
+++|+.+|.|+++++|..|+|++++.||.+|+|.. +.|..+ +.|.+|+++
T Consensus 95 ~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~----------~~Ig~gsvV 145 (191)
T 3ixc_A 95 DTVIGKFVTIGHSCILHACTLGNNAFVGMGSIVMDRAVMEEG----------SMLAAGSLL 145 (191)
T ss_dssp CEEECTTCEECTTCEECSCEECTTCEECTTCEECTTCEECTT----------CEECTTCEE
T ss_pred CeEECCCCEECCCCEEECCEECCCCEECCCCEEeCCeEECCC----------CEECCCCEE
Confidence 78999999999999999999999999999999875 666665 566666543
No 49
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=95.29 E-value=0.029 Score=56.93 Aligned_cols=49 Identities=24% Similarity=0.192 Sum_probs=34.1
Q ss_pred eeecCCceeCCCcEEEE-ceeCCCeEECCCcEEeCcCCCCCCCCCccCccceeeCCCeee
Q 002861 210 SKIAHGVSIGEDSLIYD-SNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCL 268 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~-s~l~~~v~IG~~~iisg~~i~~~~~~~~~~~~~~~iP~~~~i 268 (873)
++|+.+|.|++++.|.. ++|++++.||.+|+|.++.|.++ +.|.+|+.+
T Consensus 112 ~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~----------~~Igags~V 161 (213)
T 3kwd_A 112 VWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGAG----------CVVMMHVLI 161 (213)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTT----------CEECSSCEE
T ss_pred eEECCCcEECCCcEEcCCCEECCCCEECCCCEEeCcEECCC----------CEEcCCCEE
Confidence 56777777777777776 77777777777777777666665 566666544
No 50
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=95.18 E-value=0.0046 Score=67.77 Aligned_cols=91 Identities=16% Similarity=0.185 Sum_probs=59.9
Q ss_pred CCCCeeecc--CCCcCcC--------CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhh
Q 002861 1 MTGDVLPCF--DASTMIL--------PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAK 70 (873)
Q Consensus 1 ~~gD~i~~~--d~~~~~~--------~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~ 70 (873)
+.|||++.. ++...+. +++.+|+...|..++ +.+|++..+++-.+. .+ +|..|.|||..++.++
T Consensus 106 l~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~~~~--~~yG~I~~~~~~~~~-~~---~V~~f~EKp~~~~a~~ 179 (336)
T 2x65_A 106 LPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTRPE--TGYGYIEIGEELEEG-VH---KVAQFREKPDLETAKK 179 (336)
T ss_dssp EETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCCSCC--SSSEEEEEEEEEETT-EE---EEEEEEESCCHHHHHH
T ss_pred EcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeecccCC--CCceEEEECCccCCC-cc---EEEEEEECCChHHHHH
Confidence 358887754 2222211 367788877777664 779999887540000 01 6999999999865332
Q ss_pred cCcccCCCccceeeceeeecchHHHHHHhh
Q 002861 71 NHAILDDGRALLDTGIIAVRGKAWEELVML 100 (873)
Q Consensus 71 ~~a~~~~~~~l~~~Gi~~f~~~~~~~ll~~ 100 (873)
....+..+..+|+|+|+.+++.+.+..
T Consensus 180 ---~~~~g~y~~n~Giy~~~~~~ll~~l~~ 206 (336)
T 2x65_A 180 ---FVESGRFLWNSGMFLWKAREFIEEVKV 206 (336)
T ss_dssp ---HHHHTCEEEEEEEEEEEHHHHHHHHHH
T ss_pred ---HHhcCCeEEEeeeEEEEHHHHHHHHHH
Confidence 123466789999999999988766653
No 51
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=95.04 E-value=0.031 Score=54.75 Aligned_cols=40 Identities=20% Similarity=0.480 Sum_probs=22.4
Q ss_pred eeecCCceeCCCcEEEEceeCCCeEECCCcEEe-CcCCCCC
Q 002861 210 SKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
++|+.+|.|++++.|.+|+|++++.||.+|+|. ++.|.++
T Consensus 72 ~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~ 112 (173)
T 1v3w_A 72 TEIGEYVTIGHNAMVHGAKVGNYVIIGISSVILDGAKIGDH 112 (173)
T ss_dssp EEECSSCEECTTCEEESCEECSSEEECTTCEECTTCEECSS
T ss_pred eEECCCCEECCCCEECCCEECCCCEECCCCEEeCCCEECCC
Confidence 555556666666666666666666666665544 3444443
No 52
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=94.93 E-value=0.04 Score=54.01 Aligned_cols=48 Identities=13% Similarity=0.169 Sum_probs=40.0
Q ss_pred eeecCCceeCCCcEEE-----EceeCCCeEECCCcEEeCcCCCCCCCCCccCccceeeCCCee
Q 002861 210 SKIAHGVSIGEDSLIY-----DSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHC 267 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-----~s~l~~~v~IG~~~iisg~~i~~~~~~~~~~~~~~~iP~~~~ 267 (873)
++|+.+|.|+++++|. +++|++++.||.+|.|.++.|..+ +.|-.++.
T Consensus 50 ~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~----------~~Ig~~~~ 102 (173)
T 1v3w_A 50 IYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNY----------VIIGISSV 102 (173)
T ss_dssp EEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSS----------EEECTTCE
T ss_pred EEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCC----------CEECCCCE
Confidence 7889999999999998 588999999999999999888776 66666654
No 53
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=94.93 E-value=0.028 Score=55.68 Aligned_cols=39 Identities=18% Similarity=0.340 Sum_probs=23.1
Q ss_pred eecCCceeCCCcEEEEc------------eeCCCeEECCCcEEeCcCCCCC
Q 002861 211 KIAHGVSIGEDSLIYDS------------NISSGIQIGSLSIVVGTNFPEE 249 (873)
Q Consensus 211 vl~~~v~v~~~s~Ve~s------------~l~~~v~IG~~~iisg~~i~~~ 249 (873)
+|+.+|.|+++++|..+ +|++++.||.+|.|.++.|..+
T Consensus 60 ~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~ 110 (189)
T 3r1w_A 60 RIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGNR 110 (189)
T ss_dssp EECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCEECSS
T ss_pred EECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcEECCC
Confidence 55666666666666544 5566666666666666555554
No 54
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=94.86 E-value=0.039 Score=57.51 Aligned_cols=41 Identities=17% Similarity=0.264 Sum_probs=25.0
Q ss_pred eeeecCCceeCCCcEEEE-ceeCCCeEECCCcEEeCcCCCCC
Q 002861 209 SSKIAHGVSIGEDSLIYD-SNISSGIQIGSLSIVVGTNFPEE 249 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~-s~l~~~v~IG~~~iisg~~i~~~ 249 (873)
+++|+.+|.|++++.|.. ++|++++.||.+|+|.++.|.++
T Consensus 140 ~v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~~ 181 (247)
T 1qre_A 140 AVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKSKVGNN 181 (247)
T ss_dssp SEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTT
T ss_pred ceEECCCCEECCCCEEcCCcEECCCCEECCCCEEeceEECCC
Confidence 455666666666666666 66666666666666655555444
No 55
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=94.84 E-value=0.017 Score=59.82 Aligned_cols=35 Identities=14% Similarity=0.377 Sum_probs=22.1
Q ss_pred eeeecCCceeCCCcEEE-EceeCCCeEECCCcEEeC
Q 002861 209 SSKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVVG 243 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iisg 243 (873)
+++|+.+|.|+.+++|. +|+|++++.||.+|+|.+
T Consensus 121 ~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~ 156 (240)
T 3r8y_A 121 GAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAG 156 (240)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECTTCEECC
T ss_pred CCEECCCCEECCCCEECCCCEECCCcEECCCcEECC
Confidence 44555555555555554 677777777777777766
No 56
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=94.84 E-value=0.036 Score=54.84 Aligned_cols=51 Identities=20% Similarity=0.345 Sum_probs=39.4
Q ss_pred EeeeecCCceeCCCcEEEEceeCCCeEECCCcEEe-CcCCCCCCCCCccCccceeeCCCeee
Q 002861 208 LSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVV-GTNFPEEAGSTAEDSFRFMLPDRHCL 268 (873)
Q Consensus 208 ~~Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iis-g~~i~~~~~~~~~~~~~~~iP~~~~i 268 (873)
.+++|+.+|.|++++.|..++|++++.||.+|+|. ++.|..+ +.|..++.+
T Consensus 82 ~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~----------~~Ig~~s~V 133 (187)
T 3r3r_A 82 NPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDD----------VMIGAGSLV 133 (187)
T ss_dssp BCEEECSSCEECTTCEEESCEECSSEEECTTCEECTTCEECSS----------EEECTTCEE
T ss_pred CCeEECCCCEECCCCEEeCcEECCCCEECCCCEECCCCEECCC----------CEECCCCEE
Confidence 45788888888999999988899999999998884 4666555 666666643
No 57
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=94.76 E-value=0.052 Score=56.48 Aligned_cols=53 Identities=8% Similarity=0.194 Sum_probs=43.8
Q ss_pred eecCCceeCCCcEEEE------------------------ceeCCCeEECCCcEEeC-cCCCCCCCCCccCccceeeCCC
Q 002861 211 KIAHGVSIGEDSLIYD------------------------SNISSGIQIGSLSIVVG-TNFPEEAGSTAEDSFRFMLPDR 265 (873)
Q Consensus 211 vl~~~v~v~~~s~Ve~------------------------s~l~~~v~IG~~~iisg-~~i~~~~~~~~~~~~~~~iP~~ 265 (873)
+|+.+|.|+++++|.. ++|++++.||.+|+|.+ +.|.++ +.|-.+
T Consensus 101 ~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~v~Ig~~~~I~~~~~Ig~~----------v~IG~~ 170 (247)
T 1qre_A 101 FVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDD----------TFIGMQ 170 (247)
T ss_dssp EECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEECTTCEECTTCEEEEEEEECTT----------CEECTT
T ss_pred EECCCCEECCCeEEEecccccccCcccccceeeccCccCceEECCCCEECCCCEEcCCcEECCC----------CEECCC
Confidence 7899999999999974 78899999999999999 888877 778777
Q ss_pred eeeeeeee
Q 002861 266 HCLWEVPL 273 (873)
Q Consensus 266 ~~i~~v~l 273 (873)
+.+..+.+
T Consensus 171 a~I~~v~I 178 (247)
T 1qre_A 171 AFVFKSKV 178 (247)
T ss_dssp CEEEEEEE
T ss_pred CEEeceEE
Confidence 76644544
No 58
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=94.76 E-value=0.028 Score=64.50 Aligned_cols=52 Identities=13% Similarity=0.177 Sum_probs=45.1
Q ss_pred cCCCcccccccceeEEeeeecCCceeCCCcEEEEceeCCCeEECCCcEEeCc
Q 002861 193 IPATTVSDIAASAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGT 244 (873)
Q Consensus 193 ~~~~~~~~i~~~~~V~~Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iisg~ 244 (873)
+.+..++.|..++.|.+|+|+.+|.|+++++|..|+|++++.||.+|+|.+.
T Consensus 309 v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~ 360 (496)
T 3c8v_A 309 AWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGS 360 (496)
T ss_dssp EEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECTTCEEECC
T ss_pred eEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECCCCEEeCC
Confidence 3334445566788889999999999999999999999999999999999987
No 59
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=94.59 E-value=0.058 Score=53.39 Aligned_cols=39 Identities=26% Similarity=0.492 Sum_probs=31.3
Q ss_pred eecCCceeCCCcEEEEceeCCCeEECCCcEEe-CcCCCCC
Q 002861 211 KIAHGVSIGEDSLIYDSNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 211 vl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
+|+.+|.|++++.|..++|++++.||.+|+|. ++.|..+
T Consensus 89 ~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~v~Ig~~ 128 (189)
T 3r1w_A 89 IIGDDVTIGHQAMLHGCTIGNRVLIGMKSMIMDGAIVEDE 128 (189)
T ss_dssp EECSSEEECTTCEEESCEECSSEEECTTCEECTTCEECSS
T ss_pred EECCCCEECCCCEEeCcEECCCcEECCCCEEcCCCEECCC
Confidence 88888888888888888888888888888874 5555554
No 60
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.40 E-value=0.025 Score=61.44 Aligned_cols=79 Identities=19% Similarity=0.218 Sum_probs=55.5
Q ss_pred CCCCeeec--cCCCcCcC----CCCceEEEEEecCccccccceEEEeC----CCCCcccccccccccceeecCCHHHHhh
Q 002861 1 MTGDVLPC--FDASTMIL----PEDASCIITVPITLDIASNHGVIVAA----KDGILNENYALSLVDDLLQKPNVDELAK 70 (873)
Q Consensus 1 ~~gD~i~~--~d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d----~~~~~~~~~~~~~v~~fl~KPs~~~l~~ 70 (873)
+.||+++. .++..++. .++ ++++..+++.+..+.+|++.+| +++ .. +|..|.+||..+.
T Consensus 139 ~~~D~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~-~~------~V~~~~Ekp~~~~--- 207 (323)
T 2pa4_A 139 MLPDDLVLPTGVMERMAQVRAEFGG-SVLCAVEVSEADVSKYGIFEIEADTKDSD-VK------KVKGMVEKPAIED--- 207 (323)
T ss_dssp ECTTEEEESSCHHHHHHHHHHTTCS-EEEEEEECCGGGGGGSEEEEEEECCSSTT-EE------EEEEEEESCCTTT---
T ss_pred EeCCcccCchHHHHHHHHHHHhcCC-cEEEEEEecccccCCccEEEeCCcccCCC-ce------eEEEEEECCCCcc---
Confidence 36899986 45555554 333 5666678887888899999876 332 00 5899999996531
Q ss_pred cCcccCCCccceeeceeeecchHHHH
Q 002861 71 NHAILDDGRALLDTGIIAVRGKAWEE 96 (873)
Q Consensus 71 ~~a~~~~~~~l~~~Gi~~f~~~~~~~ 96 (873)
+...++.+|+|+|+.+.+..
T Consensus 208 ------~~~~~~~~GiY~~~~~~~~~ 227 (323)
T 2pa4_A 208 ------APSRLAATGRYLLDRKIFDA 227 (323)
T ss_dssp ------CSCSEEEEEEEEEETHHHHH
T ss_pred ------ccccEEEEEEEEECHHHHHH
Confidence 23457889999999986643
No 61
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=94.28 E-value=0.037 Score=62.85 Aligned_cols=48 Identities=21% Similarity=0.292 Sum_probs=31.5
Q ss_pred cccccccceeEEeeeecCC-------------------ceeCCCcEEEEceeCCCeEECCCcEEeCc
Q 002861 197 TVSDIAASAVVLSSKIAHG-------------------VSIGEDSLIYDSNISSGIQIGSLSIVVGT 244 (873)
Q Consensus 197 ~~~~i~~~~~V~~Svl~~~-------------------v~v~~~s~Ve~s~l~~~v~IG~~~iisg~ 244 (873)
..+.|..++.|.+|++..+ |.|+++++|.+|+|+.+|.||.||+|.+.
T Consensus 351 ~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~~~~i~~~ 417 (451)
T 1yp2_A 351 LRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVKIINK 417 (451)
T ss_dssp TTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEECTTCEECCS
T ss_pred CCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEECCCCEEeCC
Confidence 3344555666666666655 67777777777777777777777777653
No 62
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=94.25 E-value=0.043 Score=57.30 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=17.3
Q ss_pred eeecCCceeCCCcEEE----EceeCCCeEECCCcEEeC
Q 002861 210 SKIAHGVSIGEDSLIY----DSNISSGIQIGSLSIVVG 243 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve----~s~l~~~v~IG~~~iisg 243 (873)
.+|+.+|.|++++.|. +++|+.+|.||.+|+|.+
T Consensus 106 v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~ 143 (252)
T 3jqy_B 106 VIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRA 143 (252)
T ss_dssp EEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEEC
T ss_pred EEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEec
Confidence 3455555555555555 455555555555555544
No 63
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=94.03 E-value=0.023 Score=62.23 Aligned_cols=88 Identities=17% Similarity=0.174 Sum_probs=57.5
Q ss_pred CCCCeeecc--C----CCcCc---CCCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhc
Q 002861 1 MTGDVLPCF--D----ASTMI---LPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKN 71 (873)
Q Consensus 1 ~~gD~i~~~--d----~~~~~---~~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~ 71 (873)
+.|||++.- + ...+. ..++.+|+...|..++ +.+|++..+++.. . .+ +|..|.|||..+.-++
T Consensus 106 l~~D~~~~~~~~~~~~l~~~~~~~~~~~~vt~~i~p~~~~--t~yG~I~~~~~~~-~-~~---~V~~f~EKp~~~~a~~- 177 (337)
T 2cu2_A 106 LPADHYVGDDEAYREALATMLEAAEEGFVVALGLRPTRPE--TEYGYIRLGPREG-A-WY---RGEGFVEKPSYAEALE- 177 (337)
T ss_dssp EESSCEESCHHHHHHHHHHHHHHCCTTCEEEEEECCSSCC--SSSCEEEEEEEET-T-EE---EEEEEECCCCHHHHHH-
T ss_pred EECCccCCCHHHHHHHHHHHHHHHHcCCeEEEeeccCCCC--CCceEEEECCccc-c-cC---eEEEEEeCCChHHHHH-
Confidence 358888753 1 12221 1357778777777554 6799998875400 0 01 7999999998764322
Q ss_pred CcccCCCccceeeceeeecchHHHHHHh
Q 002861 72 HAILDDGRALLDTGIIAVRGKAWEELVM 99 (873)
Q Consensus 72 ~a~~~~~~~l~~~Gi~~f~~~~~~~ll~ 99 (873)
....+ .+..+|+|+|+.+.+.+.+.
T Consensus 178 --~~~~g-~~~n~Giy~f~~~~ll~~l~ 202 (337)
T 2cu2_A 178 --YIRKG-YVWNGGVFAFAPATMAELFR 202 (337)
T ss_dssp --HHHTT-CEEEEEEEEECHHHHHHHHH
T ss_pred --HhhcC-CEEEEEEEEEeHHHHHHHHH
Confidence 12234 78999999999999866665
No 64
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=93.70 E-value=0.057 Score=57.75 Aligned_cols=74 Identities=16% Similarity=0.135 Sum_probs=54.3
Q ss_pred CCCeee-ccCCCcCcC----CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccC
Q 002861 2 TGDVLP-CFDASTMIL----PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILD 76 (873)
Q Consensus 2 ~gD~i~-~~d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~ 76 (873)
.||+++ ..++..++. .++++++++.+++- ...+||+..|+++ +|..|.+||..+
T Consensus 108 ~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~d--p~~~g~v~~d~~g---------~v~~~~ekp~~~---------- 166 (293)
T 1fxo_A 108 LGDNLYYGHDFHELLGSASQRQTGASVFAYHVLD--PERYGVVEFDQGG---------KAISLEEKPLEP---------- 166 (293)
T ss_dssp ETTEEEECTTHHHHHHHHHTCCSSEEEEEEECSC--GGGSEEEEECTTS---------CEEEEEESCSSC----------
T ss_pred ECChhccCccHHHHHHHHHhcCCCcEEEEEECCC--cccCcEEEECCCC---------cEEEEEECCCCC----------
Confidence 378765 445554444 46788988887643 4579999999877 799999999543
Q ss_pred CCccceeeceeeecchHHHHH
Q 002861 77 DGRALLDTGIIAVRGKAWEEL 97 (873)
Q Consensus 77 ~~~~l~~~Gi~~f~~~~~~~l 97 (873)
....+.+|+|+|+.+++..+
T Consensus 167 -~s~~~~~Giy~~~~~~l~~~ 186 (293)
T 1fxo_A 167 -KSNYAVTGLYFYDQQVVDIA 186 (293)
T ss_dssp -SSSEEEEEEEEECTTHHHHH
T ss_pred -CCCeEEEEEEEEcHHHHHHH
Confidence 22478999999999986544
No 65
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=93.65 E-value=0.056 Score=61.20 Aligned_cols=41 Identities=20% Similarity=0.345 Sum_probs=32.9
Q ss_pred eeeecCCceeCCCcEEEEceeCCCeEECCCcEEeCcCCCCC
Q 002861 209 SSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEE 249 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iisg~~i~~~ 249 (873)
+++|+.+|.|+++++|++|+|++++.|+++|.|.++.|.++
T Consensus 283 ~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~ 323 (456)
T 2v0h_A 283 NVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEK 323 (456)
T ss_dssp EEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTT
T ss_pred CcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCC
Confidence 56788888888888888888888888888888877777665
No 66
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=93.62 E-value=0.11 Score=54.33 Aligned_cols=68 Identities=15% Similarity=0.086 Sum_probs=51.0
Q ss_pred CCCCeee-ccCCCcCcCCCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccCCCc
Q 002861 1 MTGDVLP-CFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGR 79 (873)
Q Consensus 1 ~~gD~i~-~~d~~~~~~~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~~~ 79 (873)
+.||+++ ..++..+ ..+++.++++.+++- ..+|++..|+++. + +|.+|.||+.. .
T Consensus 112 ~~gD~l~~~~~~~~~-~~~~~~~i~~~~~~~---p~yG~v~~d~~g~----~---~V~~i~EK~~~-------------s 167 (255)
T 4evw_A 112 FNIDTFRPNFVFPDI-SQHSDGYLEVFQGGG---DNWSFAKPEHAGS----T---KVIQTAEKNPI-------------S 167 (255)
T ss_dssp CCTTEECTTCCCCGG-GGSSSEEEEEEECCS---SCSCEEEESSTTC----C---BEEEEESSSCS-------------S
T ss_pred EeCCEEEecchhHHH-hhcCCcEEEEEecCC---CceeEEEECCCCC----e---EEEEEEeccCc-------------c
Confidence 5799988 4555554 367889999998763 3899999987641 1 58999999421 2
Q ss_pred cceeeceeeecch
Q 002861 80 ALLDTGIIAVRGK 92 (873)
Q Consensus 80 ~l~~~Gi~~f~~~ 92 (873)
.++.+|+|+|+..
T Consensus 168 ~~~~~GiY~f~~~ 180 (255)
T 4evw_A 168 DLCSTGLYHFNRK 180 (255)
T ss_dssp SEEEEEEEEESCH
T ss_pred CcEEEeEEEECcH
Confidence 3889999999985
No 67
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=93.58 E-value=0.092 Score=53.41 Aligned_cols=40 Identities=20% Similarity=0.310 Sum_probs=23.6
Q ss_pred eeecCCceeCCCcEEE-EceeCCCeEECCCcEEeC-cCCCCC
Q 002861 210 SKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVVG-TNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iisg-~~i~~~ 249 (873)
+.|+.+|.|+++++|+ +|+|++++.|+.+|.|.+ +.|.++
T Consensus 130 ~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~ 171 (220)
T 4ea9_A 130 SWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGER 171 (220)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTT
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCC
Confidence 3555556666666665 366666666666666665 555444
No 68
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=93.54 E-value=0.053 Score=58.07 Aligned_cols=73 Identities=19% Similarity=0.189 Sum_probs=53.4
Q ss_pred CCeee-ccCCCcCcC----CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccCC
Q 002861 3 GDVLP-CFDASTMIL----PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDD 77 (873)
Q Consensus 3 gD~i~-~~d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~ 77 (873)
||+++ ..++..++. .++++++++.+++- ...+||+..|+++ +|..|.+||..+
T Consensus 110 gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~d--p~~~g~v~~d~~g---------~v~~~~ekp~~~----------- 167 (295)
T 1lvw_A 110 GDNVFYGHRFSEILRRAASLEDGAVIFGYYVRD--PRPFGVVEFDSEG---------RVISIEEKPSRP----------- 167 (295)
T ss_dssp TTCCEECTTHHHHHHHHHTCCSSEEEEEEECSC--CTTSEEEEECTTS---------BEEEEEESCSSC-----------
T ss_pred CCccccCcCHHHHHHHHHHcCCCcEEEEEECCC--cccCCEEEECCCC---------cEEEEEECCCCC-----------
Confidence 77754 445544443 45788988888643 3479999999887 799999999543
Q ss_pred CccceeeceeeecchHHHHH
Q 002861 78 GRALLDTGIIAVRGKAWEEL 97 (873)
Q Consensus 78 ~~~l~~~Gi~~f~~~~~~~l 97 (873)
....+.+|+|+|+.+++..+
T Consensus 168 ~s~~~~~Giy~f~~~~l~~~ 187 (295)
T 1lvw_A 168 KSNYVVPGLYFYDNQVVEIA 187 (295)
T ss_dssp SCSEECCSEEEECTTHHHHH
T ss_pred CCCEEEEEeEEEcHHHHHHH
Confidence 22378899999999986544
No 69
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=93.48 E-value=0.092 Score=59.46 Aligned_cols=41 Identities=12% Similarity=0.272 Sum_probs=31.5
Q ss_pred eeeecCCceeCCCcEEEEceeCCCeEECCCcEEeCcCCCCC
Q 002861 209 SSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEE 249 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iisg~~i~~~ 249 (873)
+++|+.+|.|+++++|.+++|++++.||.+|.|.++.|..+
T Consensus 286 ~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~ 326 (459)
T 4fce_A 286 HVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDAN 326 (459)
T ss_dssp EEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTT
T ss_pred ceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCC
Confidence 46777788888888888888888888888887777777665
No 70
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=93.41 E-value=0.052 Score=60.41 Aligned_cols=38 Identities=24% Similarity=0.248 Sum_probs=20.5
Q ss_pred eecCCceeCCCcEEE-EceeCCCeEECCCcEEeCcCCCC
Q 002861 211 KIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVVGTNFPE 248 (873)
Q Consensus 211 vl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iisg~~i~~ 248 (873)
.|+++|.|+++++|. +++|++++.||.+|.|.++.|..
T Consensus 264 ~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~ 302 (401)
T 2ggo_A 264 YIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIME 302 (401)
T ss_dssp EECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECT
T ss_pred EECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcC
Confidence 455555555555554 45555555555555555554443
No 71
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=93.33 E-value=0.065 Score=53.56 Aligned_cols=40 Identities=20% Similarity=0.264 Sum_probs=25.9
Q ss_pred eeecCCceeCCCcEEE-EceeCCCeEECCCcEEeC-cCCCCC
Q 002861 210 SKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVVG-TNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iisg-~~i~~~ 249 (873)
+.|+.+|.|+++++|+ +|+|++++.|+.+|+|.+ +.|.++
T Consensus 108 ~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~ 149 (194)
T 3bfp_A 108 AKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKN 149 (194)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred CEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCC
Confidence 4566666666666665 566777777777777766 555554
No 72
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=93.31 E-value=0.08 Score=52.69 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=25.6
Q ss_pred eecCCceeCCCcEE-------------------EEceeCCCeEECCCcEEe-CcCCCCC
Q 002861 211 KIAHGVSIGEDSLI-------------------YDSNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 211 vl~~~v~v~~~s~V-------------------e~s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
.|+.+|.|++++.| ..++|+++|.||.+|+|. ++.|.++
T Consensus 98 ~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~ 156 (188)
T 3srt_A 98 EIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDN 156 (188)
T ss_dssp EECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTCEECSS
T ss_pred EECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCcEECCC
Confidence 56777777777777 345667777777777665 5555554
No 73
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=93.28 E-value=0.093 Score=52.71 Aligned_cols=33 Identities=18% Similarity=0.106 Sum_probs=22.6
Q ss_pred eeeecCCceeCCCcEE----EEceeCCCeEECCCcEE
Q 002861 209 SSKIAHGVSIGEDSLI----YDSNISSGIQIGSLSIV 241 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~V----e~s~l~~~v~IG~~~ii 241 (873)
+.+|+.+|.|++++.| .+++|++++.||.+|.|
T Consensus 70 ~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I 106 (205)
T 3vbi_A 70 KVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIV 106 (205)
T ss_dssp EEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEE
T ss_pred ceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEE
Confidence 4567777777777777 33667777777777776
No 74
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=93.26 E-value=0.045 Score=58.64 Aligned_cols=73 Identities=16% Similarity=0.100 Sum_probs=53.6
Q ss_pred CCCeee-ccCCCcCcC----CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccC
Q 002861 2 TGDVLP-CFDASTMIL----PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILD 76 (873)
Q Consensus 2 ~gD~i~-~~d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~ 76 (873)
.||+++ ..++..++. .++++++++.+++- ...+||+..|+++ +|..|.+||..+
T Consensus 109 ~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~d--p~~yg~v~~d~~g---------~v~~~~ekp~~~---------- 167 (296)
T 1mc3_A 109 LGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMD--PERFGVVEFDDNF---------RAISLEEKPKQP---------- 167 (296)
T ss_dssp ETTEEEECSSCHHHHHHHTTCCSSEEEEEEECSC--CSSSBBCEEETTE---------EEEECCBSCSSC----------
T ss_pred ECCccccccCHHHHHHHHHHcCCCCEEEEEECCC--cccCCEEEECCCC---------cEEEEEECCCCC----------
Confidence 378765 455555544 45788998887643 4479999999877 799999999643
Q ss_pred CCccceeeceeeecchHHHH
Q 002861 77 DGRALLDTGIIAVRGKAWEE 96 (873)
Q Consensus 77 ~~~~l~~~Gi~~f~~~~~~~ 96 (873)
....+.+|+|+|+.+++..
T Consensus 168 -~s~~~~~Giy~~~~~~l~~ 186 (296)
T 1mc3_A 168 -KSNWAVTGLYFYDSKVVEY 186 (296)
T ss_dssp -SCSEEEEEEEECCTHHHHH
T ss_pred -CCCEEEEEEEEEcHHHHHH
Confidence 2347899999999998654
No 75
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=93.10 E-value=0.061 Score=57.87 Aligned_cols=49 Identities=12% Similarity=0.246 Sum_probs=38.4
Q ss_pred eeeecCCceeCCCcEEEE---------ceeCCCeEECCCcEEeCcCCCCCCCCCccCccceeeCCCeee
Q 002861 209 SSKIAHGVSIGEDSLIYD---------SNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCL 268 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~---------s~l~~~v~IG~~~iisg~~i~~~~~~~~~~~~~~~iP~~~~i 268 (873)
.++|+.+|.|++++.|.. ++|+++|.||.||.| ++.|.++ ++|-.|+++
T Consensus 230 gv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI-GVtIGd~----------~iIGAGSVV 287 (347)
T 3r5d_A 230 GVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI-GIPLGDR----------NIVEAGLYI 287 (347)
T ss_dssp TCEECTTEEECTTCEECC------CCCCEECTTCEECTTCEE-CSCBCTT----------CEECTTCEE
T ss_pred eEEECCCCEECCCCEEccccCCCCccceEECCCCEECCCCEE-eeEECCC----------CEECCCCEE
Confidence 367888888888888864 688888888888888 8888776 777777743
No 76
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=92.98 E-value=0.071 Score=60.66 Aligned_cols=49 Identities=20% Similarity=0.437 Sum_probs=33.2
Q ss_pred ccccceeEEeeeecCCceeCCCcEEEEceeCCCeEECCCcEEe-CcCCCCC
Q 002861 200 DIAASAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 200 ~i~~~~~V~~Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
.|..++.|.+|+|+.+|.|+ ++.|++|+|++++.||.+|.|. ++.|..+
T Consensus 300 ~I~~~~~i~~~~ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~ 349 (468)
T 1hm9_A 300 VLTNGTYVVDSTIGAGAVIT-NSMIEESSVADGVTVGPYAHIRPNSSLGAQ 349 (468)
T ss_dssp EECTTCEEESCEECTTCEEC-SCEEESCEECTTCEECSSCEECSSCEECTT
T ss_pred EECCCCEEeccEEeCCcEEE-EEEEeccccCCCcEECCceEEecCcEECCc
Confidence 34455566667777777777 7777777777777777777776 5655544
No 77
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=92.97 E-value=0.11 Score=52.25 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=22.3
Q ss_pred eecCCceeCCCcEEEEc-------------------eeCCCeEECCCcEEe-CcCCCCC
Q 002861 211 KIAHGVSIGEDSLIYDS-------------------NISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 211 vl~~~v~v~~~s~Ve~s-------------------~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
+|+.+|.|++++.|.++ +|+++|.||.+|+|. |+.|.++
T Consensus 96 ~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~ 154 (199)
T 3ftt_A 96 TIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEG 154 (199)
T ss_dssp EECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSEEECTTCEECTTCEECTT
T ss_pred EECCCCEECCCCEEecCCCcCccccccccceecCCeEEcCCcEEcCCCEECCCCEECCC
Confidence 56666777777666433 455555565555554 4444444
No 78
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=92.96 E-value=0.071 Score=57.00 Aligned_cols=48 Identities=15% Similarity=0.273 Sum_probs=40.9
Q ss_pred eeecCCceeCCCcEEEE---------ceeCCCeEECCCcEEeCcCCCCCCCCCccCccceeeCCCeee
Q 002861 210 SKIAHGVSIGEDSLIYD---------SNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCL 268 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~---------s~l~~~v~IG~~~iisg~~i~~~~~~~~~~~~~~~iP~~~~i 268 (873)
++|+.+|.|++++.|.. .+|++++.||.||.| ++.|.++ ++|-.|+++
T Consensus 208 v~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtI-gVtIGd~----------~iIGAGSVV 264 (332)
T 3fsy_A 208 VVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGL-GISLGDD----------CVVEAGLYV 264 (332)
T ss_dssp CEECTTCEECTTCEECSBCC---CCBCEECTTCEECTTCEE-CSCBCSS----------CEECTTCEE
T ss_pred eEECCCCEECCCCEEcCCCCCCCccceEECCCCEECCCCEE-eeEECCC----------CEECCCCEE
Confidence 67888889999988864 889999999999999 9998887 888888743
No 79
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=92.96 E-value=0.074 Score=56.89 Aligned_cols=80 Identities=21% Similarity=0.277 Sum_probs=52.9
Q ss_pred CCCCeeecc--------CCCcCcC----CCCceEEEEEecCccccccceEEEeC----CCCCcccccccccccceeecCC
Q 002861 1 MTGDVLPCF--------DASTMIL----PEDASCIITVPITLDIASNHGVIVAA----KDGILNENYALSLVDDLLQKPN 64 (873)
Q Consensus 1 ~~gD~i~~~--------d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d----~~~~~~~~~~~~~v~~fl~KPs 64 (873)
+.||+++.+ ++..++. .++ +|+...++ +..+.+|++..+ +++.. + +|..|.+||.
T Consensus 134 ~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~--~~~~~yg~v~~~~~~~~~g~~---~---~v~~~~ekp~ 204 (302)
T 2e3d_A 134 ILPDVILDEYESDLSQDNLAEMIRRFDETGH-SQIMVEPV--ADVTAYGVVDCKGVELAPGES---V---PMVGVVEKPK 204 (302)
T ss_dssp ECTTEEECTTSSCTTTSTHHHHHHHHHHHCC-EEEEEEEC--SCGGGSEEEECTTCCCCTTCE---E---EECEEEESCC
T ss_pred EcCCccccCccccchHHHHHHHHHHHHhcCC-cEEEEEEc--cCCCCccEEEecccccCCCCc---e---eEEEEEECCC
Confidence 468999864 4555554 345 66666664 667889999874 22200 1 5889999997
Q ss_pred HHHHhhcCcccCCCccceeeceeeecchHHHHHHh
Q 002861 65 VDELAKNHAILDDGRALLDTGIIAVRGKAWEELVM 99 (873)
Q Consensus 65 ~~~l~~~~a~~~~~~~l~~~Gi~~f~~~~~~~ll~ 99 (873)
.+. +...+..+|+|+|+.+.+ +.+.
T Consensus 205 ~~~---------~~~~~~~~Giyi~~~~~l-~~l~ 229 (302)
T 2e3d_A 205 ADV---------APSNLAIVGRYVLSADIW-PLLA 229 (302)
T ss_dssp TTT---------CSCSEEEEEEEEECTTHH-HHHT
T ss_pred CCc---------cccceEEEEEEEECHHHH-HHHH
Confidence 531 234588999999999866 4443
No 80
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=92.93 E-value=0.081 Score=52.77 Aligned_cols=32 Identities=13% Similarity=-0.012 Sum_probs=18.2
Q ss_pred eeecCCceeCCCcEEEEceeCCCeEECCCcEE
Q 002861 210 SKIAHGVSIGEDSLIYDSNISSGIQIGSLSIV 241 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~ii 241 (873)
.+++.++.|+.++.++.+.|++++.||.+|+|
T Consensus 86 ~~Ig~~~~i~~~~~i~~~~Ig~~~~Ig~~~~I 117 (194)
T 3tv0_A 86 MIIGTNNVFEVGCYSQAMKMGDNNVIESKAYV 117 (194)
T ss_dssp EEECSSCEECTTCEECCSEECSSCEECTTCEE
T ss_pred eEECCcceEecceeEeeeeecccceecceeeE
Confidence 35666666666666665555555555555544
No 81
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=92.87 E-value=0.16 Score=53.02 Aligned_cols=62 Identities=21% Similarity=0.236 Sum_probs=47.2
Q ss_pred cccccccceeEE----eeeecCCceeCCCcEEEEc--------------------eeCCCeEECCCcEEe-CcCCCCCCC
Q 002861 197 TVSDIAASAVVL----SSKIAHGVSIGEDSLIYDS--------------------NISSGIQIGSLSIVV-GTNFPEEAG 251 (873)
Q Consensus 197 ~~~~i~~~~~V~----~Svl~~~v~v~~~s~Ve~s--------------------~l~~~v~IG~~~iis-g~~i~~~~~ 251 (873)
..+.|..++.|. +++|+.+|.|+++++|.++ +|++++.||.+|.|. ++.|.++
T Consensus 110 ~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~IG~~-- 187 (252)
T 3jqy_B 110 RRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSVGSG-- 187 (252)
T ss_dssp TTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCEECTT--
T ss_pred CCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECCCCEECCC--
Confidence 334455666666 8999999999999999996 889999999998554 6777665
Q ss_pred CCccCccceeeCCCeee
Q 002861 252 STAEDSFRFMLPDRHCL 268 (873)
Q Consensus 252 ~~~~~~~~~~iP~~~~i 268 (873)
+.|.+|+++
T Consensus 188 --------~~IgagsvV 196 (252)
T 3jqy_B 188 --------SVIGYGSIV 196 (252)
T ss_dssp --------CEECTTCEE
T ss_pred --------CEECCCCEE
Confidence 666666643
No 82
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=92.66 E-value=0.1 Score=60.10 Aligned_cols=42 Identities=26% Similarity=0.307 Sum_probs=32.5
Q ss_pred ccceeEEeeeecCCceeCCCcEEEEceeCCCeEECCCcEEeC
Q 002861 202 AASAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVG 243 (873)
Q Consensus 202 ~~~~~V~~Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iisg 243 (873)
.....+.+|+|+.++.|+..++|.+|+|+.+|.||++||+.+
T Consensus 362 G~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n 403 (501)
T 3st8_A 362 GAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVN 403 (501)
T ss_dssp EETEEEESCEECTTCEEEESCEEESEEECSSCEECTTCEEEC
T ss_pred CCeEEEccceecCCcEEeccceecCceEcCCCEECCCEEEEc
Confidence 344556778888888888888888888888888888888765
No 83
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=92.38 E-value=0.12 Score=51.25 Aligned_cols=40 Identities=23% Similarity=0.390 Sum_probs=24.3
Q ss_pred eeecCCceeCCCcEEE-------------------EceeCCCeEECCCcEEe-CcCCCCC
Q 002861 210 SKIAHGVSIGEDSLIY-------------------DSNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-------------------~s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
..|+.+|.|++++.|. .++|+++|.||.+|+|. ++.|.++
T Consensus 95 i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~gv~IG~~ 154 (185)
T 2p2o_A 95 VRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTIGDN 154 (185)
T ss_dssp EEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTTCEECTT
T ss_pred eEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCCCEECCC
Confidence 3566666666666664 34566666666666665 5555554
No 84
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=92.37 E-value=0.14 Score=51.11 Aligned_cols=39 Identities=23% Similarity=0.371 Sum_probs=23.7
Q ss_pred eecCCceeCCCcEEEE-------------------ceeCCCeEECCCcEEe-CcCCCCC
Q 002861 211 KIAHGVSIGEDSLIYD-------------------SNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 211 vl~~~v~v~~~s~Ve~-------------------s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
+|+.+|.|++++.|.+ ++|+++|.||.||+|. |+.|.++
T Consensus 98 ~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~ 156 (195)
T 3nz2_A 98 TIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQGVTIGAR 156 (195)
T ss_dssp EECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCEECTTCEECTT
T ss_pred EECCCCEECCCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCEECCCCEECCC
Confidence 5777777777777655 2556666666666653 4555444
No 85
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=92.37 E-value=0.16 Score=50.53 Aligned_cols=40 Identities=18% Similarity=0.351 Sum_probs=25.4
Q ss_pred eeecCCceeCCCcEEEE-------------------ceeCCCeEECCCcEEe-CcCCCCC
Q 002861 210 SKIAHGVSIGEDSLIYD-------------------SNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~-------------------s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
..|+.+|.|++++.|.+ ++|+++|.||.+|+|. |+.|.++
T Consensus 99 v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~ 158 (190)
T 3hjj_A 99 VRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPGVSIGDN 158 (190)
T ss_dssp EEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECTTCEECTT
T ss_pred eEECCceEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECCCCEECCC
Confidence 35777777777777743 3566666666666665 5555554
No 86
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=92.08 E-value=0.051 Score=56.45 Aligned_cols=67 Identities=18% Similarity=0.259 Sum_probs=51.2
Q ss_pred CCCeeeccCCCcCcC----CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccCC
Q 002861 2 TGDVLPCFDASTMIL----PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDD 77 (873)
Q Consensus 2 ~gD~i~~~d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~ 77 (873)
.||+++..++..++. .++++|+...+ ..+.+|++.+| ++ +|..|.+||..+
T Consensus 129 ~~D~~~~~~~~~~~~~~~~~~~~~t~~~~~----~~~~~g~v~~~-~g---------~v~~~~ekp~~~----------- 183 (259)
T 1tzf_A 129 YGDGVADLDIKATIDFHKAHGKKATLTATF----PPGRFGALDIQ-AG---------QVRSFQEKPKGD----------- 183 (259)
T ss_dssp ETTEEECCCHHHHHHHHHHHCCSEEEEEEC----CCCCSEEEEEE-TT---------EEEEEEESCSCC-----------
T ss_pred ECCEecccCHHHHHHHHHHhCCeEEEEEec----CCCCccEEEEc-CC---------EEEEEEecCCCC-----------
Confidence 589988887777665 56778876543 24679999888 55 799999999542
Q ss_pred CccceeeceeeecchHH
Q 002861 78 GRALLDTGIIAVRGKAW 94 (873)
Q Consensus 78 ~~~l~~~Gi~~f~~~~~ 94 (873)
..++.+|+|+|+.+++
T Consensus 184 -~~~~~~Giy~~~~~~l 199 (259)
T 1tzf_A 184 -GAMINGGFFVLNPSVI 199 (259)
T ss_dssp -SCCEECCCEEECGGGG
T ss_pred -CceEEEEEEEeCHHHH
Confidence 3478899999999876
No 87
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=91.98 E-value=0.19 Score=50.36 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=28.0
Q ss_pred eeecCCceeCCCcEE--------------------------EEceeCCCeEECCCcEEe-CcCCCCC
Q 002861 210 SKIAHGVSIGEDSLI--------------------------YDSNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~V--------------------------e~s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
++|+.+|.|++++.| ..++|++++.||.+|+|. ++.|.++
T Consensus 92 ~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~ 158 (205)
T 3vbi_A 92 IEMYDFANISSRTIVYAAIDDFSGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEG 158 (205)
T ss_dssp EEECTTCEECTTCEEESEECCCSSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTT
T ss_pred EEECCCCEECCCcEEEeCCCCcccccccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCC
Confidence 778888888888888 346667777777777765 5555544
No 88
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=91.85 E-value=0.11 Score=56.57 Aligned_cols=40 Identities=25% Similarity=0.407 Sum_probs=33.0
Q ss_pred eeecCCceeCCCcEEEEceeCCCeEECCCcEEeCcCCCCC
Q 002861 210 SKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iisg~~i~~~ 249 (873)
++|+++|+|+++++|.+|+|+++++|+.+|.|.+..|..+
T Consensus 84 ~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~ 123 (334)
T 2pig_A 84 CTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREE 123 (334)
T ss_dssp CEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESS
T ss_pred eeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCC
Confidence 6788888888888888888888888888888888776554
No 89
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=91.85 E-value=0.34 Score=49.01 Aligned_cols=18 Identities=11% Similarity=0.108 Sum_probs=10.5
Q ss_pred eeeecCCceeCCCcEEEE
Q 002861 209 SSKIAHGVSIGEDSLIYD 226 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~ 226 (873)
+++|+.+|.|++++.|.+
T Consensus 100 ~i~IG~~~~Ig~~~~I~~ 117 (215)
T 2wlg_A 100 KISIGKDCMLAHGYEIRN 117 (215)
T ss_dssp EEEECTTCEECTTEEEES
T ss_pred CEEECCCCEEcCCEEEEC
Confidence 345566666666666654
No 90
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=91.82 E-value=0.12 Score=54.63 Aligned_cols=15 Identities=27% Similarity=0.260 Sum_probs=6.0
Q ss_pred ceeCCCeEECCCcEE
Q 002861 227 SNISSGIQIGSLSIV 241 (873)
Q Consensus 227 s~l~~~v~IG~~~ii 241 (873)
++|++++.||.+|+|
T Consensus 178 v~IGd~v~IG~~a~I 192 (276)
T 3gos_A 178 TIIEDNCFVGARSEV 192 (276)
T ss_dssp CEECTTCEECTTCEE
T ss_pred eEECCCCEECCCCEE
Confidence 334444444444433
No 91
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=91.82 E-value=0.098 Score=57.93 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=18.3
Q ss_pred eeeecCCceeCCCcEEE-EceeCCCeEECCCcEEe
Q 002861 209 SSKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVV 242 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis 242 (873)
+++|+.+|.|+++++|. +++|.++++||++|+|.
T Consensus 161 ~~~Ig~~v~IG~~~~I~~~~~I~~~~~IG~~v~I~ 195 (372)
T 3pmo_A 161 HCVIGARSVIGEGGWLAPRVTLYHDVTIGARVSIQ 195 (372)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTEEECTTCEEC
T ss_pred CCEECCCCEECCCcccCCCcEEEeeeEECceeecc
Confidence 34455555555555555 55555555555555554
No 92
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=91.74 E-value=0.11 Score=55.99 Aligned_cols=13 Identities=31% Similarity=0.304 Sum_probs=5.6
Q ss_pred ceeCCCeEECCCc
Q 002861 227 SNISSGIQIGSLS 239 (873)
Q Consensus 227 s~l~~~v~IG~~~ 239 (873)
++|++++.||.+|
T Consensus 203 v~IGd~v~IG~~a 215 (304)
T 3eg4_A 203 TIIEDNCFIGARS 215 (304)
T ss_dssp CEECTTCEECTTC
T ss_pred eEEcCCCEECCCC
Confidence 4444444444444
No 93
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=91.68 E-value=0.032 Score=59.67 Aligned_cols=81 Identities=16% Similarity=0.115 Sum_probs=36.7
Q ss_pred CCCCeeec---cCCCcCcC----CCCceEEEEEecCccccccceEEEeCC--CCCcccccccccccceeecCCHHHHhhc
Q 002861 1 MTGDVLPC---FDASTMIL----PEDASCIITVPITLDIASNHGVIVAAK--DGILNENYALSLVDDLLQKPNVDELAKN 71 (873)
Q Consensus 1 ~~gD~i~~---~d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d~--~~~~~~~~~~~~v~~fl~KPs~~~l~~~ 71 (873)
+.||+++. .++..++. .++ +++...+++.+..+.+|++..|+ ++ . + +|..|.+||..+.
T Consensus 138 ~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~-~---~---~v~~~~ekp~~~~---- 205 (297)
T 2ux8_A 138 LLPDDFMFGQPGCLKQMVDAYNKVGG-NLICAEEVPDDQTHRYGIITPGTQDGV-L---T---EVKGLVEKPAPGT---- 205 (297)
T ss_dssp ECTTEEEESSSCHHHHHHHHHHHHCS-EEEEEC-----------CCCCCCBCSS-E---E---EC---------------
T ss_pred EeCCeecCCChHHHHHHHHHHHhcCC-CEEEEEecCcccCCCCCeEEecccCCC-c---e---eEEEEEECCCCCC----
Confidence 46899976 45555554 344 56666677767778899987763 21 0 0 5889999996532
Q ss_pred CcccCCCccceeeceeeecchHHHHHHh
Q 002861 72 HAILDDGRALLDTGIIAVRGKAWEELVM 99 (873)
Q Consensus 72 ~a~~~~~~~l~~~Gi~~f~~~~~~~ll~ 99 (873)
+...+..+|+|+|+.+.+ +.+.
T Consensus 206 -----~~~~~~~~Giyi~~~~~l-~~l~ 227 (297)
T 2ux8_A 206 -----APSNLSVIGRYILQPEVM-RILE 227 (297)
T ss_dssp --------CCCEEEEEEECTHHH-HHHH
T ss_pred -----CCccEEEEEEEEECHHHH-HHHH
Confidence 124578899999999865 4443
No 94
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=91.62 E-value=0.18 Score=54.89 Aligned_cols=51 Identities=14% Similarity=0.121 Sum_probs=29.4
Q ss_pred cCCCcccccccceeEEeeeecCCceeCCCcEEEEce-----eCCCeEECCCcEEeC
Q 002861 193 IPATTVSDIAASAVVLSSKIAHGVSIGEDSLIYDSN-----ISSGIQIGSLSIVVG 243 (873)
Q Consensus 193 ~~~~~~~~i~~~~~V~~Svl~~~v~v~~~s~Ve~s~-----l~~~v~IG~~~iisg 243 (873)
+.+..++.|..++.|-+|+|+.++.|+++++|..+. |++++.|+.++.|.+
T Consensus 163 s~I~~g~~I~~~a~I~~svI~~~a~I~~~a~V~~~~~~~v~I~~~~~I~g~a~V~R 218 (334)
T 2pig_A 163 SRIVHQVQLYGNATITHAFIEHRAEVFDFALIEGDKDNNVWICDCAKVYGHARVIA 218 (334)
T ss_dssp CEEETTCEECTTCEEESEEECTTCEECTTCEEECCSSCCEEECTTCEECTTCEEEC
T ss_pred cEEcCCCEEcCCeEEeCcEEcCCCEECCCcEECCceeccEEECCCcEEeeeEEEec
Confidence 333333444444555566666666666666666665 666666666666643
No 95
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=91.52 E-value=0.11 Score=57.62 Aligned_cols=41 Identities=20% Similarity=0.206 Sum_probs=30.5
Q ss_pred eeeecCCceeCCCcEE-EEceeCCCeEECCCcEEe-CcCCCCC
Q 002861 209 SSKIAHGVSIGEDSLI-YDSNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~V-e~s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
+++|+++|+|+++++| .+|+|++++.||++|+|. ++.|..+
T Consensus 143 ~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~~~I~~~~~I~~~ 185 (372)
T 3pmo_A 143 YAVIESGARIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHD 185 (372)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEECCCcccCCCcEEEee
Confidence 4566777778888877 678888888888888887 6665443
No 96
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=91.29 E-value=0.14 Score=51.20 Aligned_cols=32 Identities=16% Similarity=0.049 Sum_probs=13.7
Q ss_pred eeecCCceeCCCcEEEE-ceeCCCeEECCCcEE
Q 002861 210 SKIAHGVSIGEDSLIYD-SNISSGIQIGSLSIV 241 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~-s~l~~~v~IG~~~ii 241 (873)
++|+.+|.|++++.|.. ++|++++.||.++.|
T Consensus 126 ~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i 158 (194)
T 3bfp_A 126 CVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCV 158 (194)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CEECCCCEECCCCEECCCcEECCCCEEcCCCEE
Confidence 33444444444444433 444444444444433
No 97
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=91.08 E-value=0.27 Score=49.54 Aligned_cols=14 Identities=21% Similarity=0.321 Sum_probs=6.3
Q ss_pred eecCCceeCCCcEE
Q 002861 211 KIAHGVSIGEDSLI 224 (873)
Q Consensus 211 vl~~~v~v~~~s~V 224 (873)
.|+.+|.|++++.|
T Consensus 97 ~IG~~v~Ig~~v~I 110 (203)
T 1krr_A 97 TIGDNVLIAPNVTL 110 (203)
T ss_dssp EECSSCEECSSCEE
T ss_pred EECCCCEECCCCEE
Confidence 34444444444444
No 98
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=90.96 E-value=0.14 Score=56.77 Aligned_cols=48 Identities=13% Similarity=0.212 Sum_probs=21.1
Q ss_pred eecCCceeCCCcEE-EEceeCCCeEECCCcEE-eCcCCCCCCCCCccCccceeeCCCeee
Q 002861 211 KIAHGVSIGEDSLI-YDSNISSGIQIGSLSIV-VGTNFPEEAGSTAEDSFRFMLPDRHCL 268 (873)
Q Consensus 211 vl~~~v~v~~~s~V-e~s~l~~~v~IG~~~ii-sg~~i~~~~~~~~~~~~~~~iP~~~~i 268 (873)
+|+.+|.|+++++| .+|+|++++.|+.+|+| .++.|..+ +.|.++++|
T Consensus 156 ~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~----------~~I~~~~~I 205 (374)
T 2iu8_A 156 HVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKR----------VIIQPGAVI 205 (374)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTT----------CEECTTCEE
T ss_pred EECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCC----------CEECCCCEE
Confidence 34444444444444 23444444444444444 23334333 556666554
No 99
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=90.86 E-value=0.3 Score=48.30 Aligned_cols=40 Identities=18% Similarity=0.380 Sum_probs=24.3
Q ss_pred eeecCCceeCCCcEEE-------------------EceeCCCeEECCCcEEe-CcCCCCC
Q 002861 210 SKIAHGVSIGEDSLIY-------------------DSNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-------------------~s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
..|+.+|.|++++.|. .++|++++.||.+|+|. ++.|..+
T Consensus 93 i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~gv~IG~~ 152 (182)
T 1ocx_A 93 IRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDN 152 (182)
T ss_dssp EEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTTCEECTT
T ss_pred eEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCCcEECCC
Confidence 3567777777777773 35566666666666654 4555444
No 100
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=90.67 E-value=0.28 Score=52.07 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=28.3
Q ss_pred eeecCCceeCCCcEEEE---------ceeCCCeEECCCcEEeC-cCCCCC
Q 002861 210 SKIAHGVSIGEDSLIYD---------SNISSGIQIGSLSIVVG-TNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~---------s~l~~~v~IG~~~iisg-~~i~~~ 249 (873)
++|+.+|.|+.++.|.. ++|+++|.||.||+|.+ +.|.++
T Consensus 191 ~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~~ 240 (287)
T 3mc4_A 191 AVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQC 240 (287)
T ss_dssp CEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECTT
T ss_pred eEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECCC
Confidence 46666677766767765 57888888888888774 666665
No 101
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=90.46 E-value=0.19 Score=52.91 Aligned_cols=33 Identities=12% Similarity=0.305 Sum_probs=19.0
Q ss_pred eeeecCCceeCCCcEEE-EceeCCCeEECCCcEE
Q 002861 209 SSKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIV 241 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~ii 241 (873)
+++|+.+|.|+++++|. ++.|+.++.|+.+|.|
T Consensus 31 ~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~I 64 (270)
T 1j2z_A 31 GVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVL 64 (270)
T ss_dssp TCEECTTCEECTTCEECSEEEECTTCEECTTCEE
T ss_pred CCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEE
Confidence 44555555555555555 5566666666666665
No 102
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=90.17 E-value=0.21 Score=53.68 Aligned_cols=42 Identities=24% Similarity=0.357 Sum_probs=24.5
Q ss_pred cccceeEEeeeecCCceeCCCcEEEE-ceeCCCeEECCCcEEe
Q 002861 201 IAASAVVLSSKIAHGVSIGEDSLIYD-SNISSGIQIGSLSIVV 242 (873)
Q Consensus 201 i~~~~~V~~Svl~~~v~v~~~s~Ve~-s~l~~~v~IG~~~iis 242 (873)
|..++.|..+++.+++.||++++|.. ++|++++.||++|.|.
T Consensus 144 Ig~g~~I~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~ 186 (304)
T 3eg4_A 144 IAPNAILMPSFVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLS 186 (304)
T ss_dssp ECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEEC
T ss_pred ECCCCEEeCCEECCCCEECCCcEEcCCcEECCCCccCCCcEEC
Confidence 44455555556677777777777766 4455555555555443
No 103
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=90.15 E-value=0.2 Score=50.47 Aligned_cols=56 Identities=23% Similarity=0.399 Sum_probs=30.7
Q ss_pred cCCceeCCCcEEE-EceeCCCeEECCCcEEe-CcCCCCCCCCCccCccceeeCCCeeeeeeeecCcceEEEEEec
Q 002861 213 AHGVSIGEDSLIY-DSNISSGIQIGSLSIVV-GTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVYCG 285 (873)
Q Consensus 213 ~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis-g~~i~~~~~~~~~~~~~~~iP~~~~i~~v~l~~~~~~v~~~~G 285 (873)
...++||+++||. +|+|.++++||++|+|- |+.+.++ ||+++.+ .|....+++-..
T Consensus 129 ~~~v~IGd~v~IG~~a~I~~gv~IG~~~vIgagsvV~~d------------vp~~~vv-----~G~PArvik~~~ 186 (203)
T 1krr_A 129 SFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKD------------IPPNVVA-----AGVPCRVIREIN 186 (203)
T ss_dssp ECCEEECTTCEECTTCEECTTCEECTTCEECTTCEECSC------------BCTTEEE-----ETTTTEEEEECC
T ss_pred CCCcEECCCeEECCCCEEeCCeEECCCCEECCCCEECCC------------cCCCcEE-----EccCcEEeccCC
Confidence 3445555555554 35556666666666663 3333222 6888743 255566666543
No 104
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=90.07 E-value=0.23 Score=52.59 Aligned_cols=43 Identities=19% Similarity=0.338 Sum_probs=21.0
Q ss_pred cccceeEEeeeecCCceeCCCcEEE------E-ceeCCCeEECCCcEEeC
Q 002861 201 IAASAVVLSSKIAHGVSIGEDSLIY------D-SNISSGIQIGSLSIVVG 243 (873)
Q Consensus 201 i~~~~~V~~Svl~~~v~v~~~s~Ve------~-s~l~~~v~IG~~~iisg 243 (873)
|..++.|..+++..++.||+++.|. + |.|+++|.|+.++.|.+
T Consensus 119 Ig~g~~I~~~~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g 168 (276)
T 3gos_A 119 IARNTVLMPSYVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGG 168 (276)
T ss_dssp ECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECC
T ss_pred ECCCCEEcCCEEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECC
Confidence 3334333333444455555544444 4 55555555555555543
No 105
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=90.07 E-value=0.3 Score=52.63 Aligned_cols=53 Identities=13% Similarity=0.242 Sum_probs=35.5
Q ss_pred eeecCCceeCCCcEEE-----EceeCCCeEECCCcEEeC---------cCCCCCCCCCccCccceeeCCCeeeeeeee
Q 002861 210 SKIAHGVSIGEDSLIY-----DSNISSGIQIGSLSIVVG---------TNFPEEAGSTAEDSFRFMLPDRHCLWEVPL 273 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-----~s~l~~~v~IG~~~iisg---------~~i~~~~~~~~~~~~~~~iP~~~~i~~v~l 273 (873)
+++..++.|++++.|. .++|++++.||.+|.|.+ +.|.++ +.|-.|++| .+.+
T Consensus 209 a~Vn~na~IGdg~iI~~~a~igv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdn----------v~IGAnAtI-GVtI 275 (347)
T 3r5d_A 209 GFVNFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEG----------CLIGANAGI-GIPL 275 (347)
T ss_dssp CEECTTEEESSSEEECSEECTTCEECTTEEECTTCEECC------CCCCEECTT----------CEECTTCEE-CSCB
T ss_pred CEECCCCEECCCcEEcCCceEeEEECCCCEECCCCEEccccCCCCccceEECCC----------CEECCCCEE-eeEE
Confidence 4555555555555553 278889999999998877 556555 667777666 5555
No 106
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=89.84 E-value=0.14 Score=53.34 Aligned_cols=74 Identities=15% Similarity=0.005 Sum_probs=51.4
Q ss_pred CCCceEEEEEecC-ccccc--cceEEEeCCCCCcccccccccccceeecCCHHHHh---hcCcccCCCccceeeceeeec
Q 002861 17 PEDASCIITVPIT-LDIAS--NHGVIVAAKDGILNENYALSLVDDLLQKPNVDELA---KNHAILDDGRALLDTGIIAVR 90 (873)
Q Consensus 17 ~~a~vtv~a~p~~-~~~a~--~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~---~~~a~~~~~~~l~~~Gi~~f~ 90 (873)
+++++++++.|++ ++... +-|+++.|++| ++..|-+||-.++-. +... ..+...+..+|+|+|+
T Consensus 119 ~~~~~~~~~~~v~~~~~~~~p~~g~vv~d~~g---------~v~~fsr~~i~~~~~~~~~~~~-~~~~~~~~n~GiY~~~ 188 (252)
T 3oam_A 119 CSAPMATLAVEIEDEAEVFNPNAVKVITDKSG---------YALYFSRATIPWDRDNFAKADK-AIVQPLLRHIGIYAYR 188 (252)
T ss_dssp SSCSEEEEEEEECCHHHHTCTTSCEEEECTTS---------BEEEEESSCSSCCHHHHHSSSC-CCCSCEEEEEEEEEEE
T ss_pred cCCCEEEEeeecCCHHHhhCCCceEEEECCCC---------eEEEEeCCCCCCCCCccccccc-cccccceEEEEEEEcC
Confidence 5789999999875 22222 23889999888 799999998543211 0000 0134568999999999
Q ss_pred chHHHHHHhh
Q 002861 91 GKAWEELVML 100 (873)
Q Consensus 91 ~~~~~~ll~~ 100 (873)
.+++.++...
T Consensus 189 ~~~l~~~~~~ 198 (252)
T 3oam_A 189 AGFINTYLDW 198 (252)
T ss_dssp TTHHHHHHHS
T ss_pred HHHHHHHHcC
Confidence 9999987763
No 107
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=89.43 E-value=0.29 Score=49.62 Aligned_cols=32 Identities=13% Similarity=0.223 Sum_probs=14.3
Q ss_pred eeecCCceeCCCcEEEE-ceeCCCeEECCCcEE
Q 002861 210 SKIAHGVSIGEDSLIYD-SNISSGIQIGSLSIV 241 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~-s~l~~~v~IG~~~ii 241 (873)
++|+.+|.|++++.|.. ++|++++.||.+|+|
T Consensus 148 ~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i 180 (220)
T 4ea9_A 148 CRLGAACHLGPASALAGGVSVGERAFLGVGARV 180 (220)
T ss_dssp CEECTTCEECTTCEECSSCEECTTCEECTTCEE
T ss_pred CEECCCCEECCCCEEcCCCEECCCCEECCCCEE
Confidence 33444444444444433 444444444444444
No 108
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=88.95 E-value=0.38 Score=48.13 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=30.3
Q ss_pred eeeecCCceeCCCcEEEEc---eeCCCeEECCCcEEeC
Q 002861 209 SSKIAHGVSIGEDSLIYDS---NISSGIQIGSLSIVVG 243 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~s---~l~~~v~IG~~~iisg 243 (873)
+..|+.+|.|+++++|.++ +|+++|.||.+|.|..
T Consensus 74 ~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~ 111 (199)
T 3ftt_A 74 NVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYT 111 (199)
T ss_dssp TEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEEC
T ss_pred CcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEec
Confidence 4568999999999999876 8999999999999943
No 109
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=88.88 E-value=0.46 Score=50.77 Aligned_cols=58 Identities=16% Similarity=0.245 Sum_probs=42.2
Q ss_pred eeecCCceeCCCcEEEEceeCCCeEECCCcEEeCcCCCCCCCCCccCccceeeCCCeeeeeeeecCcceEEE
Q 002861 210 SKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVL 281 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~s~l~~~v~IG~~~iisg~~i~~~~~~~~~~~~~~~iP~~~~i~~v~l~~~~~~v~ 281 (873)
.+|+.+|.||++++| .+.|++++.||.+++|+.=- .+.+|+|..+-.-.|.|.....+
T Consensus 234 V~IGDnv~IGanAtI-gVtIGd~~iIGAGSVVtkdt-------------~I~~~~g~~v~a~el~g~~~~~f 291 (332)
T 3fsy_A 234 ISIGKRCLLGANSGL-GISLGDDCVVEAGLYVTAGT-------------RVTMPDSNSVKARELSGSSNLLF 291 (332)
T ss_dssp CEECTTCEECTTCEE-CSCBCSSCEECTTCEECTTC-------------EEECTTSCEEEGGGGTTCSSEEE
T ss_pred eEECCCCEECCCCEE-eeEECCCCEECCCCEECCCC-------------EEEeCCCCEEEhHHhcCCCCCEE
Confidence 689999999999999 99999999999999986533 27777877443333434333333
No 110
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=88.87 E-value=0.23 Score=49.17 Aligned_cols=29 Identities=31% Similarity=0.502 Sum_probs=16.7
Q ss_pred cCCceeCCCcEEE-EceeCCCeEECCCcEE
Q 002861 213 AHGVSIGEDSLIY-DSNISSGIQIGSLSIV 241 (873)
Q Consensus 213 ~~~v~v~~~s~Ve-~s~l~~~v~IG~~~ii 241 (873)
...++|++++||. +|+|.++++||++|+|
T Consensus 126 ~~~v~IG~~v~Ig~~a~I~~gv~IG~~~vI 155 (182)
T 1ocx_A 126 GKPVTIGNNVWIGGRAVINPGVTIGDNVVV 155 (182)
T ss_dssp ECCEEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cCCeEEeCCeEECCCCEECCCcEECCCCEE
Confidence 3445555555553 3455666666666666
No 111
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=88.73 E-value=0.38 Score=51.85 Aligned_cols=9 Identities=0% Similarity=-0.031 Sum_probs=4.7
Q ss_pred hhHHHHhhc
Q 002861 120 LYEDLVAAW 128 (873)
Q Consensus 120 ~y~df~~~~ 128 (873)
...|++..|
T Consensus 72 ~~~~~~~~l 80 (316)
T 3tk8_A 72 AVAHAIEQL 80 (316)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 334665555
No 112
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=88.59 E-value=0.31 Score=53.59 Aligned_cols=31 Identities=10% Similarity=0.159 Sum_probs=12.6
Q ss_pred eecCCceeCCCcEEE-EceeCCCeEECCCcEE
Q 002861 211 KIAHGVSIGEDSLIY-DSNISSGIQIGSLSIV 241 (873)
Q Consensus 211 vl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~ii 241 (873)
+|+.+|.|+++++|. +|.|++++.|+.+|.|
T Consensus 134 ~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I 165 (357)
T 4e79_A 134 VVGDNTVIQSHTKLDDNVEVGKDCFIDSYVTI 165 (357)
T ss_dssp EECTTCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCcEE
Confidence 334444444444443 3344444444444433
No 113
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=88.59 E-value=0.42 Score=50.25 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=27.4
Q ss_pred eeeecCCceeCCCcEEEE---------ceeCCCeEECCCcEEe-CcCCCCC
Q 002861 209 SSKIAHGVSIGEDSLIYD---------SNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~---------s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
+++|+.+|+|+.+++|.. ++|+++|.||.|++|. ++.|..+
T Consensus 163 ~~~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~gv~IG~~ 213 (267)
T 1ssq_A 163 TSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKY 213 (267)
T ss_dssp TCEECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTT
T ss_pred eeEECCCCEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeCCcEECCC
Confidence 356777777777777765 4677777777777765 3555554
No 114
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=88.47 E-value=0.23 Score=54.19 Aligned_cols=16 Identities=19% Similarity=0.339 Sum_probs=9.2
Q ss_pred ceeCCCeEECCCcEEe
Q 002861 227 SNISSGIQIGSLSIVV 242 (873)
Q Consensus 227 s~l~~~v~IG~~~iis 242 (873)
.+|+++|.||++|.|.
T Consensus 201 v~IGd~v~Ig~~~~I~ 216 (341)
T 3eh0_A 201 VIIGDRVEIGACTTID 216 (341)
T ss_dssp EEECSSCEECTTCEEE
T ss_pred EEECCCcEECCccEee
Confidence 4555556666665554
No 115
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=88.44 E-value=0.35 Score=51.90 Aligned_cols=22 Identities=5% Similarity=0.078 Sum_probs=14.6
Q ss_pred eeCCCeEECCCcEEe-CcCCCCC
Q 002861 228 NISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 228 ~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
+|+++|.||.||+|. ++.|..+
T Consensus 253 ~IGd~V~IGaga~Il~gv~IGd~ 275 (310)
T 3f1x_A 253 ILEDDVIVYSNATILGRVTIGKG 275 (310)
T ss_dssp EECTTCEECTTCEEESSCEECTT
T ss_pred EECCCcEEcCCCEECCCcEECCC
Confidence 477777777777776 5555554
No 116
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=88.26 E-value=0.44 Score=50.62 Aligned_cols=40 Identities=23% Similarity=0.325 Sum_probs=27.6
Q ss_pred eeecCCceeCCCcEEEE---------ceeCCCeEECCCcEEeC-cCCCCC
Q 002861 210 SKIAHGVSIGEDSLIYD---------SNISSGIQIGSLSIVVG-TNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve~---------s~l~~~v~IG~~~iisg-~~i~~~ 249 (873)
++|+.+|+|+.+++|.. ++|+++|.||.||+|.+ +.|.++
T Consensus 184 ~~IG~~v~I~~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilggv~IG~~ 233 (289)
T 1t3d_A 184 AVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRG 233 (289)
T ss_dssp CEECSSCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTT
T ss_pred cEECCCCEEcCCcEECCCccccCCCCeEECCCeEECCCCEEecCcEECCC
Confidence 56777777777777764 57777888888877763 555554
No 117
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=88.19 E-value=0.25 Score=54.35 Aligned_cols=9 Identities=0% Similarity=-0.082 Sum_probs=4.8
Q ss_pred cceeecCCH
Q 002861 57 DDLLQKPNV 65 (873)
Q Consensus 57 ~~fl~KPs~ 65 (873)
..|+..|..
T Consensus 43 ~~f~~~~~~ 51 (357)
T 4e79_A 43 LTFVNGEKH 51 (357)
T ss_dssp EEECCSGGG
T ss_pred EEEeCChhH
Confidence 455555554
No 118
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=88.01 E-value=0.45 Score=47.17 Aligned_cols=33 Identities=9% Similarity=0.202 Sum_probs=28.5
Q ss_pred eeeecCCceeCCCcEEEEc---eeCCCeEECCCcEE
Q 002861 209 SSKIAHGVSIGEDSLIYDS---NISSGIQIGSLSIV 241 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~s---~l~~~v~IG~~~ii 241 (873)
++.|++++.|+.+++|.++ .|+++|.||.+|.|
T Consensus 76 ~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I 111 (188)
T 3srt_A 76 NIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQI 111 (188)
T ss_dssp TEEECTTEEECTTEEEECSSCEEECSSCEECTTCEE
T ss_pred CeEECCcccccCceEEecCCceEECCeeEECCCcEE
Confidence 4568889999999999876 78999999999998
No 119
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=87.90 E-value=0.32 Score=53.11 Aligned_cols=16 Identities=25% Similarity=0.266 Sum_probs=6.8
Q ss_pred EceeCCCeEECCCcEE
Q 002861 226 DSNISSGIQIGSLSIV 241 (873)
Q Consensus 226 ~s~l~~~v~IG~~~ii 241 (873)
+|+|++++.|+.+++|
T Consensus 163 ~~~IG~~~~I~~g~~I 178 (341)
T 3eh0_A 163 EIQIGQNCLIQSGTVV 178 (341)
T ss_dssp TCEECSSCEECTTCEE
T ss_pred CCEECCccEEcCCcEE
Confidence 3444444444444444
No 120
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=87.72 E-value=0.6 Score=48.63 Aligned_cols=35 Identities=17% Similarity=0.057 Sum_probs=19.5
Q ss_pred eeeecCCceeCCCcEEE-------------EceeCCCeEECCCcEEeC
Q 002861 209 SSKIAHGVSIGEDSLIY-------------DSNISSGIQIGSLSIVVG 243 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve-------------~s~l~~~v~IG~~~iisg 243 (873)
+++|+.+|.|+++++|. +++|++++.||++|.|..
T Consensus 53 ~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~ 100 (262)
T 2qia_A 53 HTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHR 100 (262)
T ss_dssp EEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECTTCEEEC
T ss_pred CcEECCCCEEecceEECcCCccccccCCccceEECCCceeCCCCEEcC
Confidence 34555555555555554 455555555555555543
No 121
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=87.70 E-value=0.43 Score=51.14 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=22.9
Q ss_pred eeeecCCceeCCCcEEE-----EceeCCCeEECCCcEEe
Q 002861 209 SSKIAHGVSIGEDSLIY-----DSNISSGIQIGSLSIVV 242 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve-----~s~l~~~v~IG~~~iis 242 (873)
++.|+.+|.|+++++|. +++|++++.||++|.|.
T Consensus 55 ~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~~a~Ig 93 (305)
T 3t57_A 55 NTELGESCVLMTGAVVGDELPGYTFIGCNNIIGHHAVVG 93 (305)
T ss_dssp SEEECTTCEECTTCEECCSSSEEEEECSSCEECTTCEEE
T ss_pred CcEECCCcEEccCcEeccCCCCceEECCceEECCccEeC
Confidence 55666666666666665 57777777777777773
No 122
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=87.69 E-value=0.34 Score=50.97 Aligned_cols=32 Identities=16% Similarity=0.280 Sum_probs=18.6
Q ss_pred eeecCCceeCCCcEEE-EceeCCCeEECCCcEE
Q 002861 210 SKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIV 241 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~ii 241 (873)
++|+++|.|+++++|. +|+|.+++.||++|.|
T Consensus 26 ~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I 58 (270)
T 1j2z_A 26 CVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEI 58 (270)
T ss_dssp CEECTTCEECTTCEECTTCEECSEEEECTTCEE
T ss_pred CEECCCCEECCCCEEcCCcEEeCCeEEcCCCEE
Confidence 4555555556666653 4555556666666666
No 123
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=87.58 E-value=0.4 Score=51.69 Aligned_cols=15 Identities=13% Similarity=0.248 Sum_probs=6.0
Q ss_pred eecCCceeCCCcEEE
Q 002861 211 KIAHGVSIGEDSLIY 225 (873)
Q Consensus 211 vl~~~v~v~~~s~Ve 225 (873)
++..++.||++++|.
T Consensus 170 ~I~~g~~IG~~~~I~ 184 (316)
T 3tk8_A 170 YTNIGAYVDEGTMVD 184 (316)
T ss_dssp EECTTCEECTTCEEC
T ss_pred EEeCCCEECCCCEEc
Confidence 333344444444333
No 124
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=87.38 E-value=0.48 Score=49.65 Aligned_cols=35 Identities=9% Similarity=0.124 Sum_probs=21.3
Q ss_pred eeeecCCceeCCCcEE--------------EEceeCCCeEECCCcEEeC
Q 002861 209 SSKIAHGVSIGEDSLI--------------YDSNISSGIQIGSLSIVVG 243 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~V--------------e~s~l~~~v~IG~~~iisg 243 (873)
++.|+.++.|+++++| ..+.|++++.||++|.|..
T Consensus 52 ~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~ 100 (266)
T 3r0s_A 52 DTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINS 100 (266)
T ss_dssp SCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEEC
T ss_pred CcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecC
Confidence 3556666666666666 3566666666666666653
No 125
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=87.36 E-value=0.47 Score=48.23 Aligned_cols=23 Identities=17% Similarity=0.336 Sum_probs=12.9
Q ss_pred ceeCCCeEECCCcEEe-CcCCCCC
Q 002861 227 SNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 227 s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
++|+++|.||.+|+|. |+.|..+
T Consensus 120 v~IG~~v~IG~~a~I~~gv~IG~g 143 (220)
T 4hur_A 120 IEIGNDVWIGRDVTIMPGVKIGDG 143 (220)
T ss_dssp EEECSSCEECTTCEECTTCEECTT
T ss_pred eEECCCcEECCCCEEeCCCEECCC
Confidence 4566666666666664 3444443
No 126
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=87.14 E-value=0.37 Score=47.65 Aligned_cols=31 Identities=23% Similarity=0.425 Sum_probs=15.2
Q ss_pred eecCCceeCCCcEE-EEceeCCCeEECCCcEE
Q 002861 211 KIAHGVSIGEDSLI-YDSNISSGIQIGSLSIV 241 (873)
Q Consensus 211 vl~~~v~v~~~s~V-e~s~l~~~v~IG~~~ii 241 (873)
+|.+++.|+++++| .+|+|.+++.||++|.|
T Consensus 29 ~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I 60 (192)
T 3mqg_A 29 HICGGAEIGEGCSLGQNVFVGNRVRIGNRVKI 60 (192)
T ss_dssp EECTTCEECTTCEECTTCEECSSCEECSSCEE
T ss_pred EECCCcEECCCCEECCCEEECCceEECCCcEE
Confidence 34444445555554 34444445555555555
No 127
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=87.14 E-value=0.44 Score=49.92 Aligned_cols=34 Identities=29% Similarity=0.355 Sum_probs=25.3
Q ss_pred eeeecCCceeCCCcEEE-EceeCCCeEECCCcEEe
Q 002861 209 SSKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVV 242 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis 242 (873)
+..|+.++.|+++++|. ++.|++++.|+.+|.|.
T Consensus 34 ~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~ 68 (266)
T 3r0s_A 34 DAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVG 68 (266)
T ss_dssp TCEECTTCEECTTCEECSSCEECTTCEECTTCEEE
T ss_pred CCEECCCCEEcCCeEEeCCcEECCCcEEccCceec
Confidence 45567777777777777 67888888888888884
No 128
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=87.12 E-value=0.79 Score=48.46 Aligned_cols=16 Identities=25% Similarity=0.075 Sum_probs=6.9
Q ss_pred eeecCCceeCCCcEEE
Q 002861 210 SKIAHGVSIGEDSLIY 225 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve 225 (873)
++|+.++.|++++.|.
T Consensus 101 v~IG~~~~Ig~~~~I~ 116 (283)
T 4eqy_A 101 LVIGDRNTIREFTTIH 116 (283)
T ss_dssp EEECSSCEECTTEEEE
T ss_pred EEECCCcccCcceeEc
Confidence 3444444444444443
No 129
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=87.07 E-value=0.54 Score=49.76 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=21.6
Q ss_pred eeeecCCceeCCCcEE-------------EEceeCCCeEECCCcEEeC
Q 002861 209 SSKIAHGVSIGEDSLI-------------YDSNISSGIQIGSLSIVVG 243 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~V-------------e~s~l~~~v~IG~~~iisg 243 (873)
++.|+.+|.|+++++| .+++|++++.||++|.|..
T Consensus 70 ~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~~~Ig~~~~I~~ 117 (283)
T 4eqy_A 70 HTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNTIREFTTIHT 117 (283)
T ss_dssp EEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSSCEECTTEEEEC
T ss_pred CcEECCCcEEcCCcEECCCCccccccCCCceEEECCCcccCcceeEcc
Confidence 3556666666666666 3566666666666666653
No 130
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=86.90 E-value=0.34 Score=48.12 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=19.9
Q ss_pred eecCCceeCCCcEEEE----ceeCCCeEECCCcEEeCc
Q 002861 211 KIAHGVSIGEDSLIYD----SNISSGIQIGSLSIVVGT 244 (873)
Q Consensus 211 vl~~~v~v~~~s~Ve~----s~l~~~v~IG~~~iisg~ 244 (873)
.|+++|.|+++++|.. .+|++++.|+++|.|.+.
T Consensus 32 ~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~ 69 (194)
T 3tv0_A 32 TIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINA 69 (194)
T ss_dssp EECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEEC
T ss_pred EECCCCEECCCCEEccCCCCeEECCCccccCCcccccc
Confidence 4555555555555542 356666777777766543
No 131
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=86.65 E-value=0.45 Score=50.99 Aligned_cols=50 Identities=8% Similarity=0.087 Sum_probs=24.6
Q ss_pred ecCCceeCCCcEEE-EceeCCCeEECCCcEEe-----CcCCCCCCCCCccCccceeeCCCeeeeee
Q 002861 212 IAHGVSIGEDSLIY-DSNISSGIQIGSLSIVV-----GTNFPEEAGSTAEDSFRFMLPDRHCLWEV 271 (873)
Q Consensus 212 l~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis-----g~~i~~~~~~~~~~~~~~~iP~~~~i~~v 271 (873)
|+.++.|+++++|. ++.|++++.|+.+++|. ++.|.++ +.|.+++++..-
T Consensus 40 IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~----------~~Ig~~a~Ig~~ 95 (305)
T 3t57_A 40 LGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCN----------NIIGHHAVVGVK 95 (305)
T ss_dssp ECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSS----------CEECTTCEEEEC
T ss_pred ECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCc----------eEECCccEeCcc
Confidence 33333333333333 44444444444444444 3555554 777777766433
No 132
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=86.59 E-value=0.58 Score=48.99 Aligned_cols=32 Identities=25% Similarity=0.452 Sum_probs=14.5
Q ss_pred eeecCCceeCCCcEE-EEceeCCCeEECCCcEE
Q 002861 210 SKIAHGVSIGEDSLI-YDSNISSGIQIGSLSIV 241 (873)
Q Consensus 210 Svl~~~v~v~~~s~V-e~s~l~~~v~IG~~~ii 241 (873)
++|+.++.|+.++.| ++|.|++++.||.++.|
T Consensus 89 ~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i 121 (273)
T 3fs8_A 89 TIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDI 121 (273)
T ss_dssp CEECTTCEECSSCEECSSCEECSSCEECTTCEE
T ss_pred CEECCCCEECCceEECCCCEECCCCEECcccee
Confidence 344444444444444 24444444444444444
No 133
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=86.35 E-value=0.61 Score=48.57 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=25.4
Q ss_pred eeeecCCceeCCCcEEE-EceeCCCeEECCCcEEeC
Q 002861 209 SSKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVVG 243 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iisg 243 (873)
++.|+.+|.|+++++|. ++.|++++.|+.+|.|..
T Consensus 35 ~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~ 70 (262)
T 2qia_A 35 HVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGE 70 (262)
T ss_dssp TEEECTTCEECSSCEECSEEEECSSCEECTTCEEEE
T ss_pred CCEECCCcEECCCCEECCCcEECCCCEEecceEECc
Confidence 45677777777777776 677777788888777753
No 134
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=86.24 E-value=0.75 Score=46.43 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=29.8
Q ss_pred eeecCCceeCCCcEE----EEceeCCCeEECCCcEEeCc
Q 002861 210 SKIAHGVSIGEDSLI----YDSNISSGIQIGSLSIVVGT 244 (873)
Q Consensus 210 Svl~~~v~v~~~s~V----e~s~l~~~v~IG~~~iisg~ 244 (873)
++|+.+|.|++.+++ ..++|++++.||.+|.|...
T Consensus 80 ~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~ 118 (215)
T 2wlg_A 80 LQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNT 118 (215)
T ss_dssp EEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESC
T ss_pred EEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECC
Confidence 788999999986666 67889999999999999864
No 135
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=86.07 E-value=0.8 Score=47.90 Aligned_cols=40 Identities=20% Similarity=0.234 Sum_probs=26.6
Q ss_pred eeecCCceeCCCcEE-EEceeCCCeEECCCcEEe-CcCCCCC
Q 002861 210 SKIAHGVSIGEDSLI-YDSNISSGIQIGSLSIVV-GTNFPEE 249 (873)
Q Consensus 210 Svl~~~v~v~~~s~V-e~s~l~~~v~IG~~~iis-g~~i~~~ 249 (873)
++|+.++.|+++++| .+++|++++.||.+++|. ++.|..+
T Consensus 71 ~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~I~~~~~Ig~~ 112 (273)
T 3fs8_A 71 LIIGENALIRTENVIYGDTIIGDNFQTGHKVTIRENTKIGNN 112 (273)
T ss_dssp EEECTTCEECTTCEEESSCEECTTCEECSSCEECSSCEECSS
T ss_pred eEECCCCEECCCCEEeCCCEECCCCEECCceEECCCCEECCC
Confidence 567777777777777 367777777777777774 5555443
No 136
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=85.74 E-value=0.77 Score=45.69 Aligned_cols=35 Identities=17% Similarity=0.268 Sum_probs=29.1
Q ss_pred eeeecCCceeCCCcEEEEc---eeCCCeEECCCcEEeC
Q 002861 209 SSKIAHGVSIGEDSLIYDS---NISSGIQIGSLSIVVG 243 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~s---~l~~~v~IG~~~iisg 243 (873)
+..|+.++.|+.+++|.++ +|+++|.||.+|.|..
T Consensus 76 ~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~ 113 (195)
T 3nz2_A 76 TIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYT 113 (195)
T ss_dssp TEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEEC
T ss_pred CeEECCCcEECcCCEEecCceEEECCCCEECCCCEEec
Confidence 3568888888999998766 7899999999998865
No 137
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=85.74 E-value=0.76 Score=49.39 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=19.3
Q ss_pred ceeCCCeEECCCcEEeC-cCCCCCCCCCccCccceeeCCCee
Q 002861 227 SNISSGIQIGSLSIVVG-TNFPEEAGSTAEDSFRFMLPDRHC 267 (873)
Q Consensus 227 s~l~~~v~IG~~~iisg-~~i~~~~~~~~~~~~~~~iP~~~~ 267 (873)
++|+++|.||.||+|.+ +.|.++ +.|..|++
T Consensus 224 ~~IGd~v~IGaga~Ilggv~IG~~----------a~IGagsv 255 (313)
T 3q1x_A 224 PTVGDYVTIGTGAKVLGNIIVGSH----------VRIGANCW 255 (313)
T ss_dssp CEECSSCEECTTCEEESSCEECSS----------EEECTTCE
T ss_pred CEECCCCEECCCCEECCCcEECCC----------CEECCCCE
Confidence 36777777777776653 555554 56666553
No 138
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=85.14 E-value=1 Score=46.92 Aligned_cols=16 Identities=13% Similarity=-0.022 Sum_probs=7.4
Q ss_pred ceeCCCeEECCCcEEe
Q 002861 227 SNISSGIQIGSLSIVV 242 (873)
Q Consensus 227 s~l~~~v~IG~~~iis 242 (873)
++|++++.||++|.|.
T Consensus 80 v~IG~~~~Ig~~~~I~ 95 (259)
T 3hsq_A 80 TVIGDHNIFREYSNIH 95 (259)
T ss_dssp EEECSSCEECTTCEEE
T ss_pred EEECCCcEECCCCEEC
Confidence 4444444444444444
No 139
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=85.12 E-value=0.75 Score=50.72 Aligned_cols=30 Identities=10% Similarity=0.248 Sum_probs=21.1
Q ss_pred ceeCCCeEECCCcEEeCcCCCCCCCCCccCccceeeCCCee
Q 002861 227 SNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHC 267 (873)
Q Consensus 227 s~l~~~v~IG~~~iisg~~i~~~~~~~~~~~~~~~iP~~~~ 267 (873)
++|+++|.||.+|+ .|+.|..+ ++|..|++
T Consensus 291 VvIGdnv~IGagAv-~GV~IGdg----------avIGAGsV 320 (387)
T 2rij_A 291 ISVGKACLLGANSV-TGIPLGDN----------CIVDAGIA 320 (387)
T ss_dssp CEECTTCEECTTCE-ECSCBCTT----------CEECTTCE
T ss_pred eEEeCCCEECCCCc-CCcEECCC----------CEECCCCE
Confidence 56777777777777 77777666 77777764
No 140
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=85.11 E-value=0.96 Score=47.92 Aligned_cols=10 Identities=30% Similarity=0.385 Sum_probs=4.6
Q ss_pred CCCcccCcch
Q 002861 296 KDGTFCGKPW 305 (873)
Q Consensus 296 ~~~t~~g~~~ 305 (873)
.+.++.|.|=
T Consensus 255 ~~svvvG~PA 264 (287)
T 3mc4_A 255 HNVTVAGVPA 264 (287)
T ss_dssp TTEEEETTTT
T ss_pred CCCEEEccCC
Confidence 3344555543
No 141
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=84.83 E-value=1.2 Score=46.33 Aligned_cols=15 Identities=20% Similarity=0.195 Sum_probs=6.1
Q ss_pred eeecCCceeCCCcEE
Q 002861 210 SKIAHGVSIGEDSLI 224 (873)
Q Consensus 210 Svl~~~v~v~~~s~V 224 (873)
++|+.++.|++++.|
T Consensus 86 ~~IG~~~~Ig~~~~I 100 (265)
T 4e6u_A 86 LEIGNNNLIREHCSL 100 (265)
T ss_dssp EEECSSCEECTTCEE
T ss_pred EEECCCeEECCceEE
Confidence 334444444444444
No 142
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=84.75 E-value=0.74 Score=48.34 Aligned_cols=34 Identities=29% Similarity=0.491 Sum_probs=23.5
Q ss_pred eeecCCceeCCCcEEE-EceeCCCeEECCCcEEeC
Q 002861 210 SKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVVG 243 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iisg 243 (873)
.+|+.+|.|+.+++|. .++|++++.||.|++|.+
T Consensus 190 ~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV~~ 224 (267)
T 1ssq_A 190 PKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLN 224 (267)
T ss_dssp CEECTTCEECTTCEEESSCEECTTCEECTTCEECS
T ss_pred eEECCCeEEcCCCEEeCCcEECCCCEECCCCEEcc
Confidence 4677777777777775 466777777777777653
No 143
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=84.21 E-value=0.79 Score=47.72 Aligned_cols=30 Identities=20% Similarity=0.176 Sum_probs=12.0
Q ss_pred ecCCceeCCCcEEEE-ceeCCCeEECCCcEE
Q 002861 212 IAHGVSIGEDSLIYD-SNISSGIQIGSLSIV 241 (873)
Q Consensus 212 l~~~v~v~~~s~Ve~-s~l~~~v~IG~~~ii 241 (873)
|+.+|.|+++++|.. +.|++++.|+.+|.|
T Consensus 33 IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~I 63 (259)
T 3hsq_A 33 IQEGTIIEGHVKICAGSEIGKFNRFHQGAVI 63 (259)
T ss_dssp ECTTCEECTTCEECTTEEECSSCEECTTCEE
T ss_pred ECCCCEEcCCcEEcCCcEECCCcEECCCCEE
Confidence 333333333333332 334444444444444
No 144
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=83.95 E-value=0.88 Score=45.88 Aligned_cols=15 Identities=27% Similarity=0.275 Sum_probs=8.9
Q ss_pred eeecCCceeCCCcEE
Q 002861 210 SKIAHGVSIGEDSLI 224 (873)
Q Consensus 210 Svl~~~v~v~~~s~V 224 (873)
..|+.+|.|+++++|
T Consensus 59 v~IG~~~~I~~~v~i 73 (212)
T 3eev_A 59 LVIGSFCSIGSGAVF 73 (212)
T ss_dssp EEECSSCEECTTCEE
T ss_pred cEECCCCEECCCCEE
Confidence 345666666666655
No 145
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=83.79 E-value=0.24 Score=52.11 Aligned_cols=75 Identities=19% Similarity=0.142 Sum_probs=51.8
Q ss_pred CCCceEEEEEecC-ccccccceE--EEeCCCCCcccccccccccceeecCCH-HH--HhhcCcccCCCccceeeceeeec
Q 002861 17 PEDASCIITVPIT-LDIASNHGV--IVAAKDGILNENYALSLVDDLLQKPNV-DE--LAKNHAILDDGRALLDTGIIAVR 90 (873)
Q Consensus 17 ~~a~vtv~a~p~~-~~~a~~hGV--~~~d~~~~~~~~~~~~~v~~fl~KPs~-~~--l~~~~a~~~~~~~l~~~Gi~~f~ 90 (873)
+++++++++.|++ ++...+.++ ++.|++| ++..|-+||-. +. ... ..-..+...+..+|+|.|+
T Consensus 135 ~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~g---------~~l~fsr~~ip~~r~~~~~-~~~~~~~~~~~~~GiY~y~ 204 (264)
T 3k8d_A 135 RQVGMATLAVPIHNAEEAFNPNAVKVVLDAEG---------YALYFSRATIPWDRDRFAE-GLETVGDNFLRHLGIYGYR 204 (264)
T ss_dssp SSCSEEEEEEECCSHHHHTCTTSCEEEECTTS---------BEEEEESSCCSCCHHHHHH-CSSCCCSCCEEECSEEEEE
T ss_pred cCCCEEEEEEEcCCHHHccCCCceEEEECCCC---------eEEEEecCCCCCCCccccc-cccccCCcceEEEEEEEEC
Confidence 6789999999985 555665554 3468887 79999999853 21 100 0000123468899999999
Q ss_pred chHHHHHHhhh
Q 002861 91 GKAWEELVMLS 101 (873)
Q Consensus 91 ~~~~~~ll~~~ 101 (873)
.++++++..+.
T Consensus 205 ~~~l~~~~~~~ 215 (264)
T 3k8d_A 205 AGFIRRYVNWQ 215 (264)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHhCC
Confidence 99999887643
No 146
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=83.75 E-value=1 Score=44.61 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=28.7
Q ss_pred eeeecCCceeCCCcEEEE---ceeCCCeEECCCcEEeC
Q 002861 209 SSKIAHGVSIGEDSLIYD---SNISSGIQIGSLSIVVG 243 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve~---s~l~~~v~IG~~~iisg 243 (873)
+..|+.++.|+++++|.+ ..|++++.||.+|.|..
T Consensus 78 ~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~ 115 (190)
T 3hjj_A 78 NIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYT 115 (190)
T ss_dssp TEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEEC
T ss_pred ceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEec
Confidence 456888999999999984 46899999999999854
No 147
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=83.69 E-value=1.1 Score=48.19 Aligned_cols=32 Identities=19% Similarity=0.257 Sum_probs=22.0
Q ss_pred eecCCceeCCCcEEE-EceeCCCeEECCCcEEe
Q 002861 211 KIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVV 242 (873)
Q Consensus 211 vl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis 242 (873)
+|+.+|.|+++++|. .++|++++.||.|++|+
T Consensus 253 ~IGd~V~IGaga~Il~gv~IGd~a~IGagsvV~ 285 (310)
T 3f1x_A 253 ILEDDVIVYSNATILGRVTIGKGATVGGNIWVT 285 (310)
T ss_dssp EECTTCEECTTCEEESSCEECTTCEECSSCEEC
T ss_pred EECCCcEEcCCCEECCCcEECCCCEECCCCEEC
Confidence 577777777777776 66666666666666664
No 148
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=81.60 E-value=1.2 Score=47.33 Aligned_cols=33 Identities=36% Similarity=0.601 Sum_probs=21.3
Q ss_pred eeecCCceeCCCcEEE-EceeCCCeEECCCcEEe
Q 002861 210 SKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVV 242 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis 242 (873)
++|+.+|.|++++.|. .+.|++++.||.|++|.
T Consensus 210 ~~IGd~v~IGaga~Ilggv~IG~~a~IGagsvV~ 243 (289)
T 1t3d_A 210 PKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVL 243 (289)
T ss_dssp CEECTTCEECTTCEEESSCEECTTCEECTTCEEC
T ss_pred eEECCCeEECCCCEEecCcEECCCCEECCCCEEc
Confidence 4677777777776665 35566666666666664
No 149
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=81.19 E-value=1.7 Score=45.30 Aligned_cols=41 Identities=15% Similarity=0.082 Sum_probs=28.8
Q ss_pred eeeecCCceeCCCcEE-EEceeCCCeEECCCcEEeC-cCCCCC
Q 002861 209 SSKIAHGVSIGEDSLI-YDSNISSGIQIGSLSIVVG-TNFPEE 249 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~V-e~s~l~~~v~IG~~~iisg-~~i~~~ 249 (873)
+++|+.+|.|++++.| .+|+|++++.|+.++.|.+ +.|..+
T Consensus 110 ~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~ 152 (265)
T 4e6u_A 110 LTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDH 152 (265)
T ss_dssp EEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSS
T ss_pred ceEEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCC
Confidence 3777888888888877 6677777777777777765 555443
No 150
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=80.18 E-value=1.6 Score=43.15 Aligned_cols=30 Identities=27% Similarity=0.473 Sum_probs=21.1
Q ss_pred cCCceeCCCcEEE-EceeCCCeEECCCcEEe
Q 002861 213 AHGVSIGEDSLIY-DSNISSGIQIGSLSIVV 242 (873)
Q Consensus 213 ~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis 242 (873)
...++||+++||. +|+|.++++||++|+|-
T Consensus 128 ~~~v~IGd~v~IG~~~~I~~gv~IG~~~vIg 158 (185)
T 2p2o_A 128 GKPVVIGHNVWIGGRAVINPGVTIGDNAVIA 158 (185)
T ss_dssp ECCEEECSSCEECTTCEECTTCEECTTCEEC
T ss_pred cCCeEEcCCeEECCCCEECCCCEECCCCEEC
Confidence 4567777777775 56667777777777776
No 151
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=78.33 E-value=7.8 Score=39.84 Aligned_cols=70 Identities=11% Similarity=0.046 Sum_probs=41.6
Q ss_pred CCCCeeeccCCCcCcCCCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccCCCcc
Q 002861 1 MTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRA 80 (873)
Q Consensus 1 ~~gD~i~~~d~~~~~~~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~~~~ 80 (873)
+.||+++..|.-..... .+ ++++++.+- ....+||. .|+++ +|..|.+||. ..
T Consensus 124 ~~~D~~~~~~~~~~~~~-~~-~~~t~~~~~-~~~~~~v~-~d~~g---------~v~~~~e~~~--------------~~ 176 (254)
T 1jyk_A 124 IDADNYLFKNMFRNDLT-RS-TYFSVYRED-CTNEWFLV-YGDDY---------KVQDIIVDSK--------------AG 176 (254)
T ss_dssp EETTEEESSCCCCSCCC-SE-EEEECEESS-CSSCCEEE-ECTTC---------BEEEEECCCS--------------SE
T ss_pred EeCCcccCHHHHHHHHh-CC-ceEEEEccc-CCCCeEEE-ECCCC---------eEEEEEECCC--------------CC
Confidence 35899887764222222 12 233333211 11257865 67776 7999999862 23
Q ss_pred ceeeceeeecchHHHHH
Q 002861 81 LLDTGIIAVRGKAWEEL 97 (873)
Q Consensus 81 l~~~Gi~~f~~~~~~~l 97 (873)
+..+|+|+|+.+.+..+
T Consensus 177 ~~~~Giy~~~~~~~~~l 193 (254)
T 1jyk_A 177 RILSGVSFWDAPTAEKI 193 (254)
T ss_dssp EBCCSEEEECHHHHHHH
T ss_pred cEEEEEEEEcHHHHHHH
Confidence 78899999998754443
No 152
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=78.14 E-value=5.9 Score=44.94 Aligned_cols=87 Identities=20% Similarity=0.238 Sum_probs=55.9
Q ss_pred CCCeeeccCCCcCc----CCCCceEEEEEecCcccc-ccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccC
Q 002861 2 TGDVLPCFDASTMI----LPEDASCIITVPITLDIA-SNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILD 76 (873)
Q Consensus 2 ~gD~i~~~d~~~~~----~~~a~vtv~a~p~~~~~a-~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~ 76 (873)
.+|.+-.+....++ .+++++|+...+.+ .+ ...||++... +. . ++.+|-|||....-..+ ..
T Consensus 220 n~DnL~~~~d~~ll~~~~~~~a~~t~~v~~k~--~~~~~~Gvl~~~d-g~------~-~vvE~~e~p~~~~~e~k---~~ 286 (469)
T 2icy_A 220 NSDNLGAIVDLTILKHLIQNKNEYCMEVTPKT--LADVKGGTLISYE-GK------V-QLLEIAQVPDEHVNEFK---SI 286 (469)
T ss_dssp ETTBTTCCCCHHHHHHHHHHTCSEEEEEEECC--TTCCSSCEEEEET-TE------E-EEECGGGSCGGGHHHHH---SS
T ss_pred ECCcCCcccCHHHHHHHHHcCCCeeEEEEEec--cCCCceeEEEEEC-CE------E-EEEEEeccChhhhhhhc---cc
Confidence 46776554333333 27899999888764 34 3689988632 20 1 47889999975320000 12
Q ss_pred CCccceeeceeeecchHHHHHHhhh
Q 002861 77 DGRALLDTGIIAVRGKAWEELVMLS 101 (873)
Q Consensus 77 ~~~~l~~~Gi~~f~~~~~~~ll~~~ 101 (873)
+......+|+|+|+.+++.+.+...
T Consensus 287 ~~~~~~N~g~y~~~~~~L~~i~~~~ 311 (469)
T 2icy_A 287 EKFKIFNTNNLWVNLKAIKKLVEAD 311 (469)
T ss_dssp SSCCEEEEEEEEEEHHHHHHHHHTT
T ss_pred cccceeeEEEEEEcHHHHHHHHhcc
Confidence 3445679999999999999888753
No 153
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=77.43 E-value=1.5 Score=44.03 Aligned_cols=33 Identities=36% Similarity=0.528 Sum_probs=19.0
Q ss_pred eeecCCceeCCCcEEE-EceeCCCeEECCCcEEe
Q 002861 210 SKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVV 242 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis 242 (873)
.+|+.+|.||.+++|. ++.|++++.||.+++|+
T Consensus 112 v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~ 145 (212)
T 3eev_A 112 TIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVT 145 (212)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCCEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 3566666666666654 45555555555555554
No 154
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=77.27 E-value=2 Score=44.73 Aligned_cols=74 Identities=18% Similarity=0.171 Sum_probs=49.0
Q ss_pred CCCceEEEEEec-CccccccceE--EEeCCCCCcccccccccccceeecCCH-HH--HhhcCcccCCCccceeeceeeec
Q 002861 17 PEDASCIITVPI-TLDIASNHGV--IVAAKDGILNENYALSLVDDLLQKPNV-DE--LAKNHAILDDGRALLDTGIIAVR 90 (873)
Q Consensus 17 ~~a~vtv~a~p~-~~~~a~~hGV--~~~d~~~~~~~~~~~~~v~~fl~KPs~-~~--l~~~~a~~~~~~~l~~~Gi~~f~ 90 (873)
+++++++++.|+ +.+...+.++ .++|++| ++..|-+||-. +. .........+...+...|+|.|+
T Consensus 127 ~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g---------~~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~ 197 (256)
T 3tqd_A 127 DNVKVASLCTPITEVDELFNPHSTKVVLNRRN---------YALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYR 197 (256)
T ss_dssp C--CEEEEEEECCCHHHHTCTTSCEEEECTTS---------BEEEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEE
T ss_pred CCCCEEEEeeEcCCHHHhhCCCccEEEECCCC---------EEeEEecCCCCCCCcccccccccccCCcceEEEEEEEcC
Confidence 367899999998 6666666554 3578887 79999999863 21 00000011123568899999999
Q ss_pred chHHHHHHh
Q 002861 91 GKAWEELVM 99 (873)
Q Consensus 91 ~~~~~~ll~ 99 (873)
.++++.+..
T Consensus 198 ~~~l~~~~~ 206 (256)
T 3tqd_A 198 VGFLEEYLS 206 (256)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988765
No 155
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=76.06 E-value=2.4 Score=46.64 Aligned_cols=30 Identities=27% Similarity=0.299 Sum_probs=14.5
Q ss_pred eeecCCce-eCCCcEEEEceeCCCeEECCCcEE
Q 002861 210 SKIAHGVS-IGEDSLIYDSNISSGIQIGSLSIV 241 (873)
Q Consensus 210 Svl~~~v~-v~~~s~Ve~s~l~~~v~IG~~~ii 241 (873)
++|+.++. ||+ ++|+. +|+.++.||.+|.|
T Consensus 243 a~Ig~nv~vIG~-~~I~~-~Ig~~vvIGdnv~I 273 (387)
T 2rij_A 243 SYVNFNAGTTGA-CMVEG-RISSSAIVGEGSDV 273 (387)
T ss_dssp CEECTTCEESSC-CEECS-EECTTCEECTTCEE
T ss_pred eEECCCcEEECC-EEEee-EECCCCEECCCCEE
Confidence 55666665 666 55532 33444444444433
No 156
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=75.12 E-value=2.5 Score=42.88 Aligned_cols=16 Identities=19% Similarity=0.302 Sum_probs=8.7
Q ss_pred ceeCCCeEECCCcEEe
Q 002861 227 SNISSGIQIGSLSIVV 242 (873)
Q Consensus 227 s~l~~~v~IG~~~iis 242 (873)
++|+++|.||.+|+|.
T Consensus 119 v~Igd~v~IG~~a~I~ 134 (219)
T 4e8l_A 119 IEIGNDVWIGRDVTIM 134 (219)
T ss_dssp EEECSSCEECTTCEEC
T ss_pred cEECCCeEECCCCEEc
Confidence 4455555555555554
No 157
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=73.72 E-value=3.5 Score=41.50 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=5.6
Q ss_pred eCCCeEECCCcEE
Q 002861 229 ISSGIQIGSLSIV 241 (873)
Q Consensus 229 l~~~v~IG~~~ii 241 (873)
|+++|.||.+|+|
T Consensus 116 Ig~~v~IG~~a~I 128 (209)
T 1mr7_A 116 IGNDVWIGKDVVI 128 (209)
T ss_dssp ECSSCEECTTCEE
T ss_pred ECCCCEEcCCCEE
Confidence 4444444444444
No 158
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=72.16 E-value=3.4 Score=41.71 Aligned_cols=16 Identities=19% Similarity=0.353 Sum_probs=7.0
Q ss_pred ceeCCCeEECCCcEEe
Q 002861 227 SNISSGIQIGSLSIVV 242 (873)
Q Consensus 227 s~l~~~v~IG~~~iis 242 (873)
++|+++|.||.+|+|.
T Consensus 111 v~IG~~v~IG~~a~I~ 126 (212)
T 1xat_A 111 TLIGHEVWIGTEAMFM 126 (212)
T ss_dssp EEECTTCEECTTCEEC
T ss_pred eEECCCCEECCCCEEe
Confidence 3344444444444443
No 159
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=69.71 E-value=2.7 Score=42.53 Aligned_cols=33 Identities=30% Similarity=0.421 Sum_probs=21.9
Q ss_pred eeecCCceeCCCcEEE-EceeCCCeEECCCcEEe
Q 002861 210 SKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVV 242 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis 242 (873)
.+|+.+|.||.+|+|. .+.|++++.||.+|+|+
T Consensus 120 v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~ 153 (220)
T 4hur_A 120 IEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 153 (220)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCcEECCCCEEeCCCEECCCCEEcCCCEEc
Confidence 4577788888777765 45566666666666654
No 160
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=67.93 E-value=3 Score=44.78 Aligned_cols=35 Identities=17% Similarity=0.293 Sum_probs=27.3
Q ss_pred eeeecCCceeCCCcEEE-EceeCCCeEECCCcEEeC
Q 002861 209 SSKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVVG 243 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iisg 243 (873)
+.+|+.+|.||++++|. .++|++++.||.|++|++
T Consensus 223 ~~~IGd~v~IGaga~Ilggv~IG~~a~IGagsvV~~ 258 (313)
T 3q1x_A 223 HPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDR 258 (313)
T ss_dssp SCEECSSCEECTTCEEESSCEECSSEEECTTCEECS
T ss_pred CCEECCCCEECCCCEECCCcEECCCCEECCCCEECC
Confidence 45888888999888776 477888888888888753
No 161
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=65.79 E-value=4.2 Score=41.25 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=22.4
Q ss_pred eeeecCCceeCCCcEEE-EceeCCCeEECCCcEEe
Q 002861 209 SSKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVV 242 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis 242 (873)
+++|+.+|.||.+++|. ++.|++++.||.+++|+
T Consensus 118 ~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~ 152 (219)
T 4e8l_A 118 DIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 152 (219)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CcEECCCeEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 45678888888887775 35556666666666654
No 162
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=62.31 E-value=5.5 Score=40.00 Aligned_cols=34 Identities=32% Similarity=0.485 Sum_probs=22.0
Q ss_pred eeeecCCceeCCCcEEE-EceeCCCeEECCCcEEe
Q 002861 209 SSKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVV 242 (873)
Q Consensus 209 ~Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis 242 (873)
.++|+.+|.||.+++|. ++.|++++.||.+++|+
T Consensus 113 ~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~ 147 (209)
T 1mr7_A 113 DTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVV 147 (209)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEc
Confidence 34577778888877765 35566666666666554
No 163
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=58.49 E-value=6 Score=39.84 Aligned_cols=33 Identities=30% Similarity=0.522 Sum_probs=21.9
Q ss_pred eeecCCceeCCCcEEE-EceeCCCeEECCCcEEe
Q 002861 210 SKIAHGVSIGEDSLIY-DSNISSGIQIGSLSIVV 242 (873)
Q Consensus 210 Svl~~~v~v~~~s~Ve-~s~l~~~v~IG~~~iis 242 (873)
.+|+.+|.||.+++|. .+.|++++.||.+++|+
T Consensus 111 v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~ 144 (212)
T 1xat_A 111 TLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVT 144 (212)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCCEECCCCEEeCCCEECCCCEECCCCEEc
Confidence 4567777777777765 56666666666666665
No 164
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=51.31 E-value=9.4 Score=43.67 Aligned_cols=89 Identities=10% Similarity=-0.104 Sum_probs=54.8
Q ss_pred CCCee-eccCCCcCcC----CCCceEEEEEecCccccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccC
Q 002861 2 TGDVL-PCFDASTMIL----PEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILD 76 (873)
Q Consensus 2 ~gD~i-~~~d~~~~~~----~~a~vtv~a~p~~~~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~ 76 (873)
.+|.+ ...+.+.++- +++++++.+++-. ......||++.+.... +|.+|-|||.... ....+-+.
T Consensus 251 n~Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~-~~~e~~Gvl~~~dg~~--------~vvEy~E~p~~~~-~~~~~~g~ 320 (505)
T 1jv1_A 251 CVDNILVKVADPRFIGFCIQKGADCGAKVVEKT-NPTEPVGVVCRVDGVY--------QVVEYSEISLATA-QKRSSDGR 320 (505)
T ss_dssp ETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECC-STTCSCCEEEEETTEE--------EEECGGGSCHHHH-HCBCTTSS
T ss_pred ECCccccccchHHHHHHHHHcCCCEEEEEEEcc-CCccCcceEEEECCeE--------EEEEEeeCCHHHh-hhcccccc
Confidence 35554 4344444332 8899999988732 2345689998753211 4788899996532 11000011
Q ss_pred CCccceeeceeeecchHHHHHHhh
Q 002861 77 DGRALLDTGIIAVRGKAWEELVML 100 (873)
Q Consensus 77 ~~~~l~~~Gi~~f~~~~~~~ll~~ 100 (873)
.......+|+|+|+.+++.+++..
T Consensus 321 ~~~~~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 321 LLFNAGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp BSSCEEEEEEEEEEHHHHHHHHHT
T ss_pred cccceeeEEEEEecHHHHHHHHHh
Confidence 113478999999999999988764
No 165
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=40.27 E-value=20 Score=35.77 Aligned_cols=50 Identities=20% Similarity=0.120 Sum_probs=31.8
Q ss_pred cceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcccCCCccceeeceeeecchHHHHHHh
Q 002861 35 NHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVM 99 (873)
Q Consensus 35 ~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~~~~l~~~Gi~~f~~~~~~~ll~ 99 (873)
..+| +.|+++ +|..|.+||.... ++ + .+ -.....+|+|+|+.+.+.++..
T Consensus 133 ~~~~-~~~~~g---------~v~~~~e~~~~~~-~~-~--~~-~~~~~~~giy~~~~~~l~~~~~ 182 (234)
T 2y6p_A 133 DVKV-VLDREG---------YALYFSRSPIPYF-RK-N--DT-FYPLKHVGIYGFRKETLMEFGA 182 (234)
T ss_dssp SCEE-EECTTS---------BEEEEESSCCSCC-SS-C--CS-SCCEEEEEEEEEEHHHHHHHHH
T ss_pred ceEE-EEcCCC---------CEeeeecCCCCcc-cc-c--cc-ceeeEEEEEEEcCHHHHHHHHh
Confidence 4454 346666 7899999985311 00 0 01 1245799999999998877664
No 166
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=38.02 E-value=11 Score=38.62 Aligned_cols=74 Identities=19% Similarity=0.104 Sum_probs=44.2
Q ss_pred CCCceEEEEEecCc-ccccc--ceEEEeCCCCCcccccccccccceeecCCH---HHHh---hcCcccCCCccceeecee
Q 002861 17 PEDASCIITVPITL-DIASN--HGVIVAAKDGILNENYALSLVDDLLQKPNV---DELA---KNHAILDDGRALLDTGII 87 (873)
Q Consensus 17 ~~a~vtv~a~p~~~-~~a~~--hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~---~~l~---~~~a~~~~~~~l~~~Gi~ 87 (873)
.++++++.+.|+.- +...+ .+.++.++++ ++..|.+||-. ++.. ..+....|......+|+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---------~v~~f~~~~~~~~r~~~~~~~~~~~~~~p~~~~~~~giy 189 (262)
T 1vic_A 119 FNVNMASLAVKIHDAEELFNPNAVKVLTDKDG---------YVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLRHIGIY 189 (262)
T ss_dssp HTCSEEEEEEECCCHHHHTCTTSCEEEECTTS---------BEEEEESSCSSCCHHHHTTCSCGGGCCCCTTCEEEEEEE
T ss_pred cCCCEEEEEEecCCHHHhcCCCceEEEECCCC---------CEeeeecCCCCcCCccccccccccccccccceEEEEEEE
Confidence 46788888888753 22222 2333447666 67888888732 2100 000112344467899999
Q ss_pred eecchHHHHHHh
Q 002861 88 AVRGKAWEELVM 99 (873)
Q Consensus 88 ~f~~~~~~~ll~ 99 (873)
+|+.+.+..+..
T Consensus 190 ~~~~~~l~~~~~ 201 (262)
T 1vic_A 190 AYRAGFIKQYVQ 201 (262)
T ss_dssp EEEHHHHHHHHH
T ss_pred EeeHHHHHHHHh
Confidence 999988877654
No 167
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=36.24 E-value=25 Score=39.92 Aligned_cols=88 Identities=19% Similarity=0.089 Sum_probs=57.3
Q ss_pred CCCCeeecc-CCCcC---cCCCCceEEEEEecCcccccc-ceEEEeCCCCCcccccccccccceeecCCHHHHhhcCccc
Q 002861 1 MTGDVLPCF-DASTM---ILPEDASCIITVPITLDIASN-HGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAIL 75 (873)
Q Consensus 1 ~~gD~i~~~-d~~~~---~~~~a~vtv~a~p~~~~~a~~-hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~ 75 (873)
+.||.+.+. |...+ ...++++++.+.+.+ .++. .|+++.+ ++. . +|.++-++|....-.. -.
T Consensus 232 ~ngDnL~~~~d~~~L~~~~~~~a~~t~~v~~~~--~p~~~yG~Iv~~-dG~------~-~iVE~~e~~~e~~~~~---~~ 298 (488)
T 2i5k_A 232 SNGDNLGATVDLKILNHMIETGAEYIMELTDKT--RADVKGGTLISY-DGQ------V-RLLEVAQVPKEHIDEF---KN 298 (488)
T ss_dssp ECTTBSSCCCCHHHHHHHHHSCCSEEEEEEECC--GGGSSSCEEEEE-TTE------E-EEECGGGSCTTSHHHH---TC
T ss_pred EeCCcCCCcccHHHHHHHHhcCCcEEEEEEEec--CCCCceeEEEEE-CCc------E-EEEEeccCCHHHHhhc---cc
Confidence 367886664 44322 127899999988653 3443 7888765 331 1 4788888887643110 02
Q ss_pred CCCccceeeceeeecchHHHHHHhhh
Q 002861 76 DDGRALLDTGIIAVRGKAWEELVMLS 101 (873)
Q Consensus 76 ~~~~~l~~~Gi~~f~~~~~~~ll~~~ 101 (873)
.+......+|+|+|+.+++.+.+...
T Consensus 299 ~~~~~~~Ntgi~~f~~~~L~~~l~~~ 324 (488)
T 2i5k_A 299 IRKFTNFNTNNLWINLKAVKRLIESS 324 (488)
T ss_dssp TTTCCEEEEEEEEEEHHHHHHHHHTT
T ss_pred ccccCEEEEEEEEEeHHHHHHHHhhc
Confidence 33455679999999999999999854
No 168
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=33.53 E-value=27 Score=35.04 Aligned_cols=67 Identities=13% Similarity=0.078 Sum_probs=41.0
Q ss_pred CCceEEEEEecCccccccceEEE--eCCCCCcccccccccccceeecCCHHHHhhcCcccCCCccceeeceeeecchHHH
Q 002861 18 EDASCIITVPITLDIASNHGVIV--AAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWE 95 (873)
Q Consensus 18 ~a~vtv~a~p~~~~~a~~hGV~~--~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~~~~~~~l~~~Gi~~f~~~~~~ 95 (873)
++++++.+.|++..+..+.+++. .++++ ++..|.+||.... ++ .........+|+|+|+.+.+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---------~~~~~~~~~~~~~-r~----~~~~~~~~~~g~y~~~~~~l~ 184 (245)
T 1h7e_A 119 ALPVATLCHAISAAEAAEPSTVKVVVNTRQ---------DALYFSRSPIPYP-RN----AEKARYLKHVGIYAYRRDVLQ 184 (245)
T ss_dssp TCCEEEEEEEECHHHHTCTTSCEEEECTTC---------BEEEEESSCSSCC-TT----GGGCCEEEEEEEEEEEHHHHH
T ss_pred CCCEEEEeecCCHHHhcCCCCcEEEECCCC---------cEEEeecCCCCCC-cc----cccCceeEEEEEEEcCHHHHH
Confidence 67888888887444433434332 25555 6788888765321 00 001123568999999999887
Q ss_pred HHH
Q 002861 96 ELV 98 (873)
Q Consensus 96 ~ll 98 (873)
+++
T Consensus 185 ~~~ 187 (245)
T 1h7e_A 185 NYS 187 (245)
T ss_dssp HGG
T ss_pred HHH
Confidence 765
No 169
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=28.46 E-value=57 Score=33.39 Aligned_cols=71 Identities=18% Similarity=0.086 Sum_probs=42.3
Q ss_pred CCceEEEEEec-Cc---cccccceEEEeCCCCCcccccccccccceeecCCHHHHhhcCcc---cCCCccceeeceeeec
Q 002861 18 EDASCIITVPI-TL---DIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAI---LDDGRALLDTGIIAVR 90 (873)
Q Consensus 18 ~a~vtv~a~p~-~~---~~a~~hGV~~~d~~~~~~~~~~~~~v~~fl~KPs~~~l~~~~a~---~~~~~~l~~~Gi~~f~ 90 (873)
+++++.++.|. +. .--+..+| +.|++| ++..|-.||-..+ ++.... ..+...+...|+|.|+
T Consensus 121 ~~~~at~~~~~~~~~~~~~p~~~kv-v~d~~g---------~~l~fsr~~ip~~-r~~~~~~~~~~~~~~~~~~GiY~f~ 189 (253)
T 4fcu_A 121 NCSMSTLCEPIHALDEFQRDSIVKV-VMSKQN---------EALYFSRATIPYD-RDGAKRDEPTLHTQAFRHLGLYAYR 189 (253)
T ss_dssp TCSEEEEEEECCCHHHHHCTTSCEE-EECTTS---------BEEEEESSCCSCC-TTTSSSSSCCCCSCCEEEEEEEEEE
T ss_pred CCCEEEEeEEcCCHHHccCCCccEE-EECCCC---------eEEEecCCCCCCC-CCcccccccccccceeEEEEEEEeC
Confidence 45555555554 22 22223455 567777 7899999885421 100000 0023557799999999
Q ss_pred chHHHHHHh
Q 002861 91 GKAWEELVM 99 (873)
Q Consensus 91 ~~~~~~ll~ 99 (873)
.+++.++..
T Consensus 190 ~~~l~~~~~ 198 (253)
T 4fcu_A 190 VSLLQEYVT 198 (253)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999988775
Done!