Query 002864
Match_columns 872
No_of_seqs 313 out of 2407
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 04:34:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002864.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002864hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 6E-158 2E-162 1434.8 86.5 846 5-871 64-963 (967)
2 2xdt_A Endoplasmic reticulum a 100.0 9E-153 3E-157 1392.9 86.1 839 5-868 4-892 (897)
3 4fke_A Aminopeptidase N; zinc 100.0 6E-154 2E-158 1406.8 73.1 845 5-870 6-904 (909)
4 1z5h_A Tricorn protease intera 100.0 1E-138 5E-143 1250.6 66.0 769 14-857 1-777 (780)
5 2gtq_A Aminopeptidase N; alani 100.0 1E-94 3.4E-99 872.4 52.4 717 6-773 9-788 (867)
6 3b34_A Aminopeptidase N; prote 100.0 2.3E-86 7.8E-91 796.2 57.2 703 6-759 32-793 (891)
7 3ebh_A PFA-M1, M1 family amino 100.0 6.2E-86 2.1E-90 786.3 59.5 701 11-755 11-790 (889)
8 3cia_A Cold-active aminopeptid 100.0 2.3E-79 8E-84 718.1 24.0 524 6-614 18-560 (605)
9 3u9w_A Leukotriene A-4 hydrola 100.0 1.1E-77 3.7E-82 704.3 30.9 440 7-471 6-473 (608)
10 2xq0_A LTA-4 hydrolase, leukot 100.0 4.9E-77 1.7E-81 700.1 21.5 548 6-641 20-613 (632)
11 3rjo_A Endoplasmic reticulum a 100.0 1.8E-72 6.3E-77 633.7 44.1 398 452-869 1-410 (419)
12 4fgm_A Aminopeptidase N family 99.9 1.7E-27 6E-32 275.1 19.8 292 155-455 124-451 (597)
13 1u4g_A Elastase, pseudolysin; 81.8 50 0.0017 33.9 17.8 102 229-337 73-175 (301)
14 2y3u_A Collagenase, collagenas 81.4 1.8 6.3E-05 50.5 6.6 107 227-335 338-469 (785)
15 1bqb_A Protein (aureolysin); h 80.3 4 0.00014 42.0 8.0 107 229-336 67-178 (301)
16 3dnz_A Thermolysin; hydrolase, 74.3 5.3 0.00018 41.2 6.8 102 228-337 69-177 (316)
17 4ger_A Gentlyase metalloprotea 72.3 20 0.00069 36.7 10.5 102 228-337 62-170 (304)
18 3cqb_A Probable protease HTPX 71.3 3.1 0.00011 35.7 3.7 67 235-312 27-98 (107)
19 2vqx_A Metalloproteinase; ther 70.4 28 0.00096 36.4 11.3 105 228-337 89-197 (341)
20 3nqx_A MCP-02, secreted metall 65.5 46 0.0016 34.1 11.4 98 229-336 74-175 (306)
21 1lsh_A Lipovitellin (LV-1N, LV 62.1 27 0.00092 43.1 10.9 190 546-758 356-557 (1056)
22 2qk1_A Protein STU2; STU2P, XM 49.4 1.3E+02 0.0045 29.6 11.9 98 561-668 29-135 (249)
23 1r55_A ADAM 33; metalloproteas 38.0 28 0.00096 33.8 4.5 14 296-309 135-148 (214)
24 3c37_A Peptidase, M48 family; 37.9 31 0.0011 34.6 4.9 19 294-312 97-115 (253)
25 3isy_A Bsupi, intracellular pr 37.3 2E+02 0.007 24.8 9.5 27 87-113 81-107 (120)
26 2ejq_A Hypothetical protein TT 34.6 18 0.0006 32.1 2.1 45 274-321 68-112 (130)
27 1yp1_A FII; FII hydrolase; 1.9 33.9 48 0.0016 31.8 5.4 13 297-309 135-147 (202)
28 1bud_A Protein (acutolysin A); 33.2 53 0.0018 31.3 5.6 14 296-309 132-145 (197)
29 2w15_A Zinc metalloproteinase 32.9 56 0.0019 31.2 5.7 14 296-309 135-148 (202)
30 2ero_A VAP-1, vascular apoptos 30.6 60 0.0021 35.3 6.1 14 296-309 145-158 (427)
31 1qua_A Acutolysin-C, hemorrhag 26.0 49 0.0017 31.5 3.9 13 297-309 135-147 (197)
32 1atl_A Atrolysin C; metalloend 25.6 49 0.0017 31.7 3.8 14 296-309 135-148 (202)
33 2c9r_A COPC, copper resistance 25.5 2.1E+02 0.0073 23.8 7.3 21 85-106 64-84 (102)
34 1lyq_A PCOC copper resistance 23.0 2.4E+02 0.0081 23.6 7.1 21 85-106 66-86 (104)
35 1kuf_A Atrolysin E, metallopro 22.9 54 0.0018 31.4 3.5 14 296-309 137-150 (203)
36 3iuk_A Uncharacterized protein 22.2 1.3E+02 0.0044 33.8 6.9 54 402-455 495-554 (562)
37 3k7n_A K-like; SVMP, hydrolase 21.9 1E+02 0.0036 32.9 5.9 14 296-309 138-151 (397)
38 2e3x_A Coagulation factor X-ac 21.5 50 0.0017 35.9 3.3 14 296-309 138-151 (427)
39 3e11_A Predicted zincin-like m 20.9 53 0.0018 28.3 2.6 35 273-309 68-102 (114)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=5.9e-158 Score=1434.81 Aligned_cols=846 Identities=34% Similarity=0.597 Sum_probs=768.2
Q ss_pred CCCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEecCceeeEEEEEeccCCCC--ccccCeeEEEe
Q 002864 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS--KALEPTKVELV 82 (872)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~--~~~~~~~~~~~ 82 (872)
-..+|||.+++|.||+|.|++|+++.+|+|+|+|++++.++++.|+||+.+|+|.++.+.+..+... .........++
T Consensus 64 ~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~ 143 (967)
T 3se6_A 64 WQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP 143 (967)
T ss_dssp CCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG
T ss_pred cccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec
Confidence 3568999999999999999999999999999999999999999999999999999999875321100 01111222333
Q ss_pred cCCeEEEEEeCCCcCCc-eEEEEEEEEeeecCCCcceEEeeecc-CCeeecccccCCCcccccccccccCCCCce----E
Q 002864 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACK----I 156 (872)
Q Consensus 83 ~~~~~l~i~l~~~L~~g-~~~L~i~y~g~~~~~~~G~~~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~k----l 156 (872)
.++.+.|.++++|++| .|+|+|.|+|.+++++.|||++.|.+ +|..+++++|||||++||+||||||||++| |
T Consensus 144 -~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~i 222 (967)
T 3se6_A 144 -AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSI 222 (967)
T ss_dssp -GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEE
T ss_pred -CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEE
Confidence 5678899999999999 89999999999999999999999976 688899999999999999999999999999 9
Q ss_pred EEEecCCCeeeecCcccce-eecCCeEEEEEecCCCccceeeEEEEeeeeEeeccccCCeEEEEEEcCCchhhHHHHHHH
Q 002864 157 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 235 (872)
Q Consensus 157 ~i~~p~~~~~~sng~~~~~-~~~~~~~~~~f~~t~~~~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 235 (872)
+|++|++|+|+|||++.++ ...+++++++|+.+||||+|++||+||+|+.++..+.+|+++++|++|+..+.++++++.
T Consensus 223 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~ 302 (967)
T 3se6_A 223 KIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQA 302 (967)
T ss_dssp EEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHH
T ss_pred EEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHH
Confidence 9999999999999998765 445778999999999999999999999999988666779999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeecCCCCCcccccccccccccccccccCCCChHHHHHHHHHHHHHHHHHHHhcCccc
Q 002864 236 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 315 (872)
Q Consensus 236 ~~~~l~~~e~~~g~~yP~~kld~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~vt 315 (872)
+.+++++|+++||+|||++|+|+|++|+|..|||||||+++|++..+|+++..++...++.++.+||||+|||||||+||
T Consensus 303 ~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT 382 (967)
T 3se6_A 303 SLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382 (967)
T ss_dssp HHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEE
T ss_pred HHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999998888888999999999999999999999
Q ss_pred cCccchhhhhhHHHHHHHHHHHhhhCcchhhHHHHHHHHHHhhhccccCCCCceeeecCCchhhhhcccceeechhhHHH
Q 002864 316 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 395 (872)
Q Consensus 316 ~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kga~vl 395 (872)
|+||+|+|||||||+|++++++++.+|+|.++..|+.+...++..|+..++||+..++.++.+++..|+.++|.||++||
T Consensus 383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL 462 (967)
T 3se6_A 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL 462 (967)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence 99999999999999999999999999999987777666557788999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc---------------------------cCCcHHHHHHHhh
Q 002864 396 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWT 448 (872)
Q Consensus 396 ~mL~~~lG~~~F~~~lr~yl~~~~~~~~~~~df~~~l~~~---------------------------~~~~l~~~~~~W~ 448 (872)
|||+..||++.|+++||.|+++|+|++++++|||++++++ +|.++++||++|+
T Consensus 463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~ 542 (967)
T 3se6_A 463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT 542 (967)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence 9999999999999999999999999999999999999995 6889999999999
Q ss_pred cCCCcceEEEEEeCcEEEEEEEeeccCCCC---------CCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccc
Q 002864 449 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI 519 (872)
Q Consensus 449 ~~~g~P~l~v~~~~~~i~l~Q~rf~~~~~~---------~~~~w~iPi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (872)
.|+|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+|+..++.++.++.
T Consensus 543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------ 616 (967)
T 3se6_A 543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------ 616 (967)
T ss_dssp HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence 999999999999889999999999875432 23589999999987655445577777666666642
Q ss_pred cCCCCCCceEEecCCceeEEEEEcCHHHHHHHHHHHHc--CCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCC
Q 002864 520 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEM--KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEET 597 (872)
Q Consensus 520 ~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~--~~i~~~~ra~li~D~~~la~~g~l~~~~~l~l~~~l~~e~ 597 (872)
.+ +||++|.++.||||||||+++|.+|+++|.. ..|++.+|||||+|+|+||++|.++|+.+|+|++||++|+
T Consensus 617 ---~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~ 691 (967)
T 3se6_A 617 ---KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHET 691 (967)
T ss_dssp ---CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCC
T ss_pred ---CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC
Confidence 34 8999999999999999999999999999975 3699999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 002864 598 EYTVLSNLITISYKIGRIAADA-RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNE 676 (872)
Q Consensus 598 ~~~~w~~~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~g~~~c~~~ 676 (872)
+|+||.+++..|.+|.+++... .++.++.|++|++++++++|+++||+ +++++.++.+|..++.+||.+|+++|+++
T Consensus 692 ~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~--~~~~~~~~~lR~~il~~ac~~g~~~c~~~ 769 (967)
T 3se6_A 692 SSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQK 769 (967)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSS--CCSCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCC--CCCcHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 9999999999999999988632 25678899999999999999999998 46889999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q 002864 677 ASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFL 756 (872)
Q Consensus 677 A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~il~aL~c~~d~~~l~~~L~~~ 756 (872)
|.++|++|+++++...|||++|.+|||++++ ++++|++||++|++++++.||..||.||||++|+++++++|+++
T Consensus 770 A~~~f~~~~~~~~~~~i~~~lr~~Vyc~~~~-----~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~ 844 (967)
T 3se6_A 770 AAELFSQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELG 844 (967)
T ss_dssp HHHHHHHHHHTTTCSCCCHHHHHHHHHHHTT-----SHHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcccCChhhhhHhHhhhhc-----cHHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 9999999998754446999999999997643 48899999999999999999999999999999999999999999
Q ss_pred hcCc-CCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCCc
Q 002864 757 LSSE-VRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKP 831 (872)
Q Consensus 757 l~~~-i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~ 831 (872)
++++ |+.||...++. ++.| |++++|+|+++||+.|.++|+.+ +.+.++|..+++.|+|+++++++++||+.++..
T Consensus 845 l~~~~i~~qd~~~~~~~v~~n~~g~~~~w~f~~~nw~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~l~~~~~f~~~~~~~ 924 (967)
T 3se6_A 845 MEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ 924 (967)
T ss_dssp HHCSSSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHTTTTTCCSHHHHHHHHHHHHHSCSS
T ss_pred hCcCcCcHhHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCcc
Confidence 9875 89999999998 8777 99999999999999999999844 689999999999999999999999999987544
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhhccC
Q 002864 832 -YIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRK 871 (872)
Q Consensus 832 -~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~~~~~ 871 (872)
...+++++++|+|+.|++|++++.+. |.+||+.|+++.
T Consensus 925 ~~~~~~~~q~le~i~~ni~W~~~~~~~--i~~wl~~~~~~~ 963 (967)
T 3se6_A 925 GSHLDIFQTVLETITKNIKWLEKNLPT--LRTWLMVNTRHH 963 (967)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCC-
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhccccc
Confidence 34689999999999999999999999 999999998763
No 2
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=8.8e-153 Score=1392.95 Aligned_cols=839 Identities=32% Similarity=0.579 Sum_probs=765.6
Q ss_pred CCCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEecCceeeEEEEEeccCCCCccc--cCeeEEEe
Q 002864 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKAL--EPTKVELV 82 (872)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~--~~~~~~~~ 82 (872)
-.++|||.+++|.||+|.|++|+++.+|+|+++|++++.++++.|+||+.+|+|.++.+.+.++ ..+ ....+.++
T Consensus 4 ~~~~rLp~~~~p~hY~l~L~~d~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~v~~~~~---~~~~~~~~~~~~~ 80 (897)
T 2xdt_A 4 WNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAG---ERLSEEPLQVLEH 80 (897)
T ss_dssp CCCSSCCSSEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCEEEEEEECSSCEEEEEEEEEC-------CEEEECEEEEE
T ss_pred cccCcCCCCcEeeEEEEEEEEecCCCeEEEEEEEEEEEEcCCCEEEEEeCCCEEEEEEEEecCC---cccccccceeEEc
Confidence 3568999999999999999999999999999999999988899999999999999999975211 122 33445667
Q ss_pred cCCeEEEEEeCCCcCCc-eEEEEEEEEeeecCCCcceEEeeecc-CCeeecccccCCCcccccccccccCCCCce----E
Q 002864 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACK----I 156 (872)
Q Consensus 83 ~~~~~l~i~l~~~L~~g-~~~L~i~y~g~~~~~~~G~~~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~k----l 156 (872)
..++.++|.++++|++| .++|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||.+||+||||||+|++| |
T Consensus 81 ~~~~~l~i~l~~~L~~g~~~~L~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~i 160 (897)
T 2xdt_A 81 PRQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSI 160 (897)
T ss_dssp TTTTEEEEEEEEEECTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTHHHHSCBCCSTTSCBEEEE
T ss_pred CCCcEEEEEeCCccCCCCEEEEEEEEEEEeCCCCceeEeeeeecCCCceeEEEEecceecccceEEeccCCccccCeEEE
Confidence 77889999999999999 79999999999999899999999865 688889999999999999999999999999 9
Q ss_pred EEEecCCCeeeecCccccee-ecCCeEEEEEecCCCccceeeEEEEeeeeEeeccccCCeEEEEEEcCCchhhHHHHHHH
Q 002864 157 TLDVPSELVALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 235 (872)
Q Consensus 157 ~i~~p~~~~~~sng~~~~~~-~~~~~~~~~f~~t~~~~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 235 (872)
+|++|++|+|+|||++.++. ..+++++++|+.++|||+|++||+||+|..++..+.+|+++++|++|+..+.++++++.
T Consensus 161 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~~ 240 (897)
T 2xdt_A 161 KIRREPRHLAISNMPLVKSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDA 240 (897)
T ss_dssp EEEECTTCEEEESSCEEEEEEEETTEEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCHHHHHH
T ss_pred EEEEcCCceEecCCCccceEecCCCEEEEEEeCCCccchhheEEEEEcceeeccccCCCeeEEEEcCCChHHHHHHHHHH
Confidence 99999999999999988763 45678999999999999999999999999988656779999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeecCCCCCcccccccccccccccccccCCCChHHHHHHHHHHHHHHHHHHHhcCccc
Q 002864 236 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 315 (872)
Q Consensus 236 ~~~~l~~~e~~~g~~yP~~kld~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~vt 315 (872)
+.+++++|+++||+|||++|+|+|++|+|..|||||||+++|++..+|+++..++...++.++.+||||+|||||||+||
T Consensus 241 ~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlVT 320 (897)
T 2xdt_A 241 AVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVT 320 (897)
T ss_dssp HHHHHHHHHHHTTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEE
T ss_pred HHHHHHHHHHHhCCCCCccceeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999998888888899999999999999999999
Q ss_pred cCccchhhhhhHHHHHHHHHHHhhhCcchhhHHHHHHHHHHhhhccccCCCCceeeecCCchhhhhcccceeechhhHHH
Q 002864 316 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 395 (872)
Q Consensus 316 ~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kga~vl 395 (872)
|+||+|+|||||||+|++++++++.+|+|.++..|......++..|+..++||+..++.++.++...|+.++|.||++||
T Consensus 321 ~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f~~~~~~a~~~D~~~~~~Pi~~~v~~p~~i~~~fd~i~Y~KGa~vl 400 (897)
T 2xdt_A 321 MEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKGACIL 400 (897)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCGGGGHHHHHHHHHHHHTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCcchhhhhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhcccCCCCCEEeCCCHHHHHHhcchhhhhhHHHHH
Confidence 99999999999999999999999999999888888544457788899999999998888999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc-------------------c--------CCcHHHHHHHhh
Q 002864 396 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG-------------------S--------GEPVNKLMNSWT 448 (872)
Q Consensus 396 ~mL~~~lG~~~F~~~lr~yl~~~~~~~~~~~df~~~l~~~-------------------~--------~~~l~~~~~~W~ 448 (872)
|||+..||++.|+++|+.|+++|+|++++++|||++++++ + |.++++||++|+
T Consensus 401 ~mL~~~lG~e~F~~gl~~Yl~~~~~~~a~~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~ 480 (897)
T 2xdt_A 401 NMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTDGVKGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWT 480 (897)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTC----------------------------CCCHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCHHHHHHHhh
Confidence 9999999999999999999999999999999999999996 5 899999999999
Q ss_pred cCCCcceEEEEEeCcEEEEEEEeeccCCCC---CCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCC
Q 002864 449 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDN 525 (872)
Q Consensus 449 ~~~g~P~l~v~~~~~~i~l~Q~rf~~~~~~---~~~~w~iPi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (872)
+|+|+|+++|++++++++|+|+||..++.. ....|+|||+|.+++++....+|+..++.++.++. .+
T Consensus 481 ~q~G~P~l~v~~~~~~~~l~Q~~f~~~~~~~~~~~~~w~iPi~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~- 550 (897)
T 2xdt_A 481 LQKGFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV- 550 (897)
T ss_dssp SSCSEEEEEEEEETTEEEEEEEEECCC-----CCCCCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC-
T ss_pred cCCCceEEEEEEcCCEEEEEEEEeecCCCCCCCCCceEEEEEEEEeCCCCccceEEecCCceEEEccC---------CC-
Confidence 999999999999988999999999876532 24589999999876554445688887766666531 34
Q ss_pred CceEEecCCceeEEEEEcCHHHHHHHHHHHHcC--CCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHH
Q 002864 526 GGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLS 603 (872)
Q Consensus 526 ~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~ra~li~D~~~la~~g~l~~~~~l~l~~~l~~e~~~~~w~ 603 (872)
+||++|.++.|||||+||+++|..|+++|..+ .|++.+|||||+|+|+||++|.++|+.+|+|++||++|++|+||.
T Consensus 551 -~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~~~~w~ 629 (897)
T 2xdt_A 551 -EWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVF 629 (897)
T ss_dssp -SCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTTSSCHHHHHHHHGGGGGCCCHHHHH
T ss_pred -ceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 89999999999999999999999999999754 699999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccChhHH---HHHHHHHHHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 002864 604 NLITISYKIGRIAADARPELL---DYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKR 680 (872)
Q Consensus 604 ~~~~~l~~l~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~g~~~c~~~A~~~ 680 (872)
+++..|.+|..++...+ .+ ..|++|++++++++|+++||+. ++++.++.+|..|+.+||.+|+++|+++|+++
T Consensus 630 ~~~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~lg~~~--~~~~~~~~lr~~~~~~ac~~g~~~c~~~a~~~ 705 (897)
T 2xdt_A 630 QGLNELIPMYKLMEKRD--MNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGY 705 (897)
T ss_dssp HHHHHHHHHHHHHHTSS--CHHHHHHHHHHHHHHHHHHHHTCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCh--hhhHHHHHHHHHHHHHHHHHHHcCCCC--CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 99999999999987532 45 7899999999999999999986 67899999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhcC-
Q 002864 681 FHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSS- 759 (872)
Q Consensus 681 f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~il~aL~c~~d~~~l~~~L~~~l~~- 759 (872)
|++|++++..+.|||++|.+|||+++ |++++|++||++|++++++.||..+|.||||++|+++|+++|++++++
T Consensus 706 f~~~~~~~~~~~i~~~lr~~vy~~~~-----g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~c~~~~~~l~~~L~~~~~~~ 780 (897)
T 2xdt_A 706 FRKWKESNGNLSLPVDVTLAVFAVGA-----QSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGD 780 (897)
T ss_dssp HHHHHHTTTCSCCCHHHHHHHHHHHT-----TSHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCS
T ss_pred HHHHhcCCCcCCCCcchhhhEEEEec-----CCHHHHHHHHHHHHccCCHHHHHHHHHHhccCCCHHHHHHHHHHHhCCC
Confidence 99999875556899999999998763 799999999999999999999999999999999999999999999975
Q ss_pred cCCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCC-chHH
Q 002864 760 EVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCK-PYIA 834 (872)
Q Consensus 760 ~i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~~~~f~~~~~~-~~~~ 834 (872)
.|+.||...+|. ++.| |++++|+|+++||+.|.++|+.+ +.+.++|..+++.|+|+++++++++||+.++. ....
T Consensus 781 ~i~~qd~~~~~~~v~~n~~g~~~~~~~~~~n~~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~~~~~ 860 (897)
T 2xdt_A 781 KIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKENGSQL 860 (897)
T ss_dssp SSCGGGHHHHHHHHHTSTTTHHHHHHHHHHTHHHHHHHHCTTCHHHHHHHHHTTTTCCSHHHHHHHHHHHHHTGGGTTTC
T ss_pred CCcHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCccchhH
Confidence 599999999998 8766 99999999999999999999854 67899999999999999999999999998633 3556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhh
Q 002864 835 RTLRQSIERVQINAKWVESIRNEGHLAEAVKELA 868 (872)
Q Consensus 835 ~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~~ 868 (872)
+++++++|+|+.|++|++++.+. |.+||+++.
T Consensus 861 ~~~~~~le~i~~n~~w~~~~~~~--i~~wl~~~~ 892 (897)
T 2xdt_A 861 RCVQQTIETIEENIGWMDKNFDK--IRVWLQSEK 892 (897)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhCHHH--HHHHHHhhh
Confidence 89999999999999999999999 999999874
No 3
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=6.5e-154 Score=1406.76 Aligned_cols=845 Identities=33% Similarity=0.563 Sum_probs=758.2
Q ss_pred CCCCcCCCCceeeeEEEEEEecCCC-----CeEEEEEEEEEEEECCCCEEEEEecCceeeEE----EEEeccCCCCcccc
Q 002864 5 KGQPRLPKFAVPKRYDIRLTPDLTS-----CKFGGSVAIDVDVVGDTKFIVLNAADLTINNR----SVSFTNKVSSKALE 75 (872)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~d~~~-----~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v----~i~~~~~~~~~~~~ 75 (872)
-++||||.+|+|+||+|.|++|++. .+|+|+|+|++++.++++.|+||+.+|+|..+ .+.+. +......
T Consensus 6 ~~~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~i~~~~~~~~~~~~--~~~~~~~ 83 (909)
T 4fke_A 6 WNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYTTQGHMVVLRGV--GDSQVPE 83 (909)
T ss_dssp GGSSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCEECCSSSSCEEEES--TTCCCCC
T ss_pred cccccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCEEEeeeeEEEEecC--CCcceec
Confidence 4679999999999999999998643 58999999999999999999999999999763 33321 1223344
Q ss_pred CeeEEEecCCeEEEEEeCCCcCCc-eEEEEEEEEeeecCCCcceEEeeeccCCeeecccccCCCcccccccccccCCCCc
Q 002864 76 PTKVELVEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPAC 154 (872)
Q Consensus 76 ~~~~~~~~~~~~l~i~l~~~L~~g-~~~L~i~y~g~~~~~~~G~~~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ 154 (872)
.....++...+.++|.++++|++| .|+|+|.|+|.+++++.|||++.|.++|..+++++|||||++||+||||||||++
T Consensus 84 ~~~~~~~~~~~~l~i~l~~~l~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~~~~~~~~Tqfep~~AR~~FPc~DeP~~ 163 (909)
T 4fke_A 84 IDRTELVELTEYLVVHLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAM 163 (909)
T ss_dssp EEEEEEETTTTEEEEEEEEEECTTCEEEEEEEEEEECCSSSSEEEEEEEEETTEEEEEEEEECTTTTGGGTSCBCCSTTS
T ss_pred ccceEEecCCcEEEEEcCCCcCCCCEEEEEEEEEEEECCCCeEEEEeeEEECCceEEEEEEcCcccCcCEEEEeCCcccc
Confidence 566778899999999999999999 8999999999999999999999999888889999999999999999999999999
Q ss_pred e----EEEEecCCCeeeecCccccee----ecCCeEEEEEecCCCccceeeEEEEeeeeEeeccccCCeEEEEEEcCCch
Q 002864 155 K----ITLDVPSELVALSNMPVIDEK----VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKA 226 (872)
Q Consensus 155 k----l~i~~p~~~~~~sng~~~~~~----~~~~~~~~~f~~t~~~~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~ 226 (872)
| |+|++|++|+|+|||++.++. .++++++++|+.+||||+|++||+||+|.+++..+.+|+++++|++|+..
T Consensus 164 KAtf~i~i~~p~~~~alSN~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~~~ 243 (909)
T 4fke_A 164 KATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAI 243 (909)
T ss_dssp CBEEEEEEEEETTSEEEESSCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHHHH
T ss_pred ceEEEEEEEECCCCEEEcCCcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecchh
Confidence 9 999999999999999988652 24679999999999999999999999999988777889999999999865
Q ss_pred h--hHHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCCcccccccccccccccccccCCCChHHHHHHHHHHHHHH
Q 002864 227 N--QGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHE 304 (872)
Q Consensus 227 ~--~~~~~l~~~~~~l~~~e~~~g~~yP~~kld~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHE 304 (872)
+ .++++++.+.+++++|+++||+|||++|+|+|++|+|..||||||||++|++..+|+++..++...++.++.+||||
T Consensus 244 ~~~~~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~viaHE 323 (909)
T 4fke_A 244 AEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHE 323 (909)
T ss_dssp HTTTTHHHHHHHHHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHhccCCCCCCcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHHHH
Confidence 4 45799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCccccCccchhhhhhHHHHHHHHHHHhhhCcchhhHHHHHHHHH-HhhhccccCCCCceeee---cCCchhhh
Q 002864 305 LAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVE---VNHTGEID 380 (872)
Q Consensus 305 laHqWfGn~vt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~---~~~~~~~~ 380 (872)
+|||||||+|||+||+|+|||||||+|++++++++.+|+|.++..|..... .++..|+..++||+..+ +.++.+++
T Consensus 324 lAHqWFGnlVT~~~W~dlWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~~~~v~~~~~i~ 403 (909)
T 4fke_A 324 LAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQIS 403 (909)
T ss_dssp HHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCCGGGCCSHHHHH
T ss_pred HHhhhhcCeecccccCcceeehHHHHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCccccccccCChhhHH
Confidence 999999999999999999999999999999999999999999888876655 67888999999999875 56788899
Q ss_pred hcccceeechhhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCC--------cHHHHHHHhhcCCC
Q 002864 381 EIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE--------PVNKLMNSWTKQKG 452 (872)
Q Consensus 381 ~~f~~i~Y~Kga~vl~mL~~~lG~~~F~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~--------~l~~~~~~W~~~~g 452 (872)
..|+.++|.||++|||||+..||++.|+++||.|+++|+|++++++|||++|++++|. ++++||++|++|+|
T Consensus 404 ~~fd~i~Y~KGa~vL~mL~~~lG~e~F~~gl~~Yl~~~~~~na~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~W~~q~G 483 (909)
T 4fke_A 404 EMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMG 483 (909)
T ss_dssp TTSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHHHHSSCS
T ss_pred hhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcccccccchhHHhHhhCccccCC
Confidence 9999999999999999999999999999999999999999999999999999999874 59999999999999
Q ss_pred cceEEEEEeCcEEEEEEEeeccCCCC-------CCCeeEEEEEEEECcccceeeEEeec-cceEEEecccccccccCCCC
Q 002864 453 YPVISVKVKEEKLELEQSQFLSSGSP-------GDGQWIVPITLCCGSYDVCKNFLLYN-KSDSFDIKELLGCSISKEGD 524 (872)
Q Consensus 453 ~P~l~v~~~~~~i~l~Q~rf~~~~~~-------~~~~w~iPi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 524 (872)
||+|+|+++.+. ++|+||...... .+..|+|||++.+...... ..++.. ......+.. ...+
T Consensus 484 ~Pvv~V~~~~~~--~~q~~~~~~~~~~~~~~~~~~~~w~IPl~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~ 553 (909)
T 4fke_A 484 FPVITVDTKTGN--ISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQD-HYWLRDVSQAQNDLFK-------TASD 553 (909)
T ss_dssp CEEEEEETTTTE--EEEEECCSCTTCCCCSCCTTTTCCCEEECEEETTEECC-CEEECSCSEEECGGGC-------CCTT
T ss_pred CcEEEEEeccCc--EEEEEEEeccCCCCCCCCCCCceEEEEEEEEeCCCccc-eEEeeccccceeeecc-------CCCC
Confidence 999999887765 678888764321 1237999999987543322 233332 222222221 2234
Q ss_pred CCceEEecCCceeEEEEEcCHHHHHHHHHHHHcC--CCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHH
Q 002864 525 NGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVL 602 (872)
Q Consensus 525 ~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~ra~li~D~~~la~~g~l~~~~~l~l~~~l~~e~~~~~w 602 (872)
+||++|.++.|||||+||+++|.+|+++|..+ .|++.+|+|||+|+|+||++|.++++.+|+++.||++|++|+||
T Consensus 554 --~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag~~~~~~~l~l~~~l~~E~~y~~w 631 (909)
T 4fke_A 554 --DWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKEYMPW 631 (909)
T ss_dssp --CCEEESGGGCSSCEEEECHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHTTGGGGGCCSHHHH
T ss_pred --CeEEECCCceEEEEEecCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCccHHHH
Confidence 89999999999999999999999999999754 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhcCCccC----CCCCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 002864 603 SNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSK----PGESHLDALLRGEIFTALALLGHKETLNEAS 678 (872)
Q Consensus 603 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~----~~~~~~~~~lr~~il~~ac~~g~~~c~~~A~ 678 (872)
.+++..|.+|..++.. ++.+..|++|+++++.++|+++||... .++++.++.+|..++.+||.+|+++|++.|+
T Consensus 632 ~~~~~~l~~l~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lr~~~l~~ac~~g~~~c~~~a~ 709 (909)
T 4fke_A 632 QAALSSLSYFSLMFDR--SEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGLPQCENLAK 709 (909)
T ss_dssp HHHHHHHHHHHHHHTT--STTHHHHHHHHHHHHHHHHHHHHHHTTTTTSCCSSHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 9999999999999876 457899999999999999999976432 3578899999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhc
Q 002864 679 KRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLS 758 (872)
Q Consensus 679 ~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~il~aL~c~~d~~~l~~~L~~~l~ 758 (872)
++|++|+++++++.||||+|.+|||++ +++|++++|+++|++|+++++++||..+|.||||++|+++++++|+++++
T Consensus 710 ~~f~~~~~~~~~~~i~~dlr~~vy~~~---~~~g~~~~~~~l~~~~~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~l~ 786 (909)
T 4fke_A 710 TLFDQWMSDPENNPIHPNLRSTIYCNA---IAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLN 786 (909)
T ss_dssp HHHHHHHTCTTSCCSCTTTHHHHHHHH---HHHSCHHHHHHHHHHHHHCCSHHHHHHHHHHHTTCCCHHHHHHHHHHTTC
T ss_pred HHHHHHhhCCCCCcCCHHHHHHHHHHH---HHhCCHHHHHHHHHHHHccCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhC
Confidence 999999988777889999999888865 45899999999999999999999999999999999999999999999998
Q ss_pred Cc-CCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCCc--
Q 002864 759 SE-VRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKP-- 831 (872)
Q Consensus 759 ~~-i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~-- 831 (872)
++ ||+||...+|. ++.| |++++|+|+++||+.|.++++++ +.+.++|..+++.|+|+++++++++||+.+...
T Consensus 787 ~~~ir~qd~~~~~~~v~~n~~g~~~~~~f~~~n~~~l~~~~~~~~~~~~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~~~ 866 (909)
T 4fke_A 787 PDLIRKQDATSTINSIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGF 866 (909)
T ss_dssp TTTSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHCTTTTTSSSSCCCCHHHHHHHHHTTCCSHHHHHHHHHHHTTCSSSCC
T ss_pred CCCCchhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCcccc
Confidence 74 99999999999 8776 99999999999999999999854 679999999999999999999999999987643
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhhcc
Q 002864 832 -YIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR 870 (872)
Q Consensus 832 -~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~~~~ 870 (872)
...+++++++|+|+.|++|.+++.+. |.+||++|..+
T Consensus 867 ~~~~~~~~~~le~i~~n~~w~~~~~~~--i~~wL~~n~s~ 904 (909)
T 4fke_A 867 GSGTRALEQALEKTKANIKWVKENKEV--VLNWFIEHSSH 904 (909)
T ss_dssp GGGTTHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHCC-
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHhcCcc
Confidence 45789999999999999999999999 99999998765
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=1.3e-138 Score=1250.59 Aligned_cols=769 Identities=32% Similarity=0.556 Sum_probs=696.6
Q ss_pred ceeeeEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEecCceeeEEEEEeccCCCCccccCeeEEEecCCeEEEEEeC
Q 002864 14 AVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFA 93 (872)
Q Consensus 14 v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~ 93 (872)
|+|.||+|+|++++++.+|+|+|+| + ++++.|+||+.+|+|.+|++++ .+..+.++. +.++|.++
T Consensus 1 v~p~hY~l~l~~~~~~~~f~G~v~I--~--~~~~~i~L~~~~l~I~~v~~~g---------~~~~~~~~~--~~l~i~~~ 65 (780)
T 1z5h_A 1 MEVEKYDLTLDFDIQKRTFNGTETI--T--ADAGDIVLDAVGLQINWMKVNG---------RDTAFTYDG--QTVRAPGD 65 (780)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEE--E--ECSSCEEEECSSCEEEEEEETT---------EECCCEECS--SEEEECCC
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEE--E--cCCCEEEEEccCCEEEEEEEec---------eeccEEEEC--CEEEEEeC
Confidence 6899999999999999999999999 4 6789999999999999999854 123334433 47777765
Q ss_pred CCcCCceEEEEEEEEeeecCCCcceEEeeeccCCeeecccccCCCcccccccccccCCCCce----EEEEecCCCeeeec
Q 002864 94 ETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACK----ITLDVPSELVALSN 169 (872)
Q Consensus 94 ~~L~~g~~~L~i~y~g~~~~~~~G~~~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~k----l~i~~p~~~~~~sn 169 (872)
+|.++|+|.|+|.+++++.|||++.|. ++++.|||||.+||+||||||+|++| ++|++|++|+|+||
T Consensus 66 ----~g~~~l~i~y~g~~~~~~~G~y~~~y~-----~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lSN 136 (780)
T 1z5h_A 66 ----SQPQKIEISFAGKVSDSLSGIYYAGRE-----NGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISN 136 (780)
T ss_dssp ----SSSEEEEEEEEEECBSSSSEEEEESST-----TCEEEEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEES
T ss_pred ----CccEEEEEEEEEEeCCCcccceecccc-----ceEEEEccccCChhheeecCCCcccccEEEEEEEECCCCEEEeC
Confidence 378999999999999989999998875 67889999999999999999999999 99999999999999
Q ss_pred CcccceeecCCeEEEEEecCCCccceeeEEEEeeeeEeeccccCCeEEEEEEcCCchhhHHHHHHHHHHHHHHHHHHhCC
Q 002864 170 MPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAV 249 (872)
Q Consensus 170 g~~~~~~~~~~~~~~~f~~t~~~~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~~~~l~~~e~~~g~ 249 (872)
|++.++ ..+++++++|+.+||||+|++||+||+|..++..+. |+++++|++|+ +.++++++.+.+++++|+++||+
T Consensus 137 ~~~~~~-~~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~~-gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg~ 212 (780)
T 1z5h_A 137 MPPKRI-EVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYR-DIDLILASLKD--IRSKYPLDMARKSVEFYENYFGI 212 (780)
T ss_dssp SCEEEE-EESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEET-TEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHSS
T ss_pred Cccccc-cCCCceEEEEecCCcccceEEEEEEeccEEEeeccC-CeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhCC
Confidence 998765 456788999999999999999999999999886544 89999999998 67799999999999999999999
Q ss_pred CCCCCCcceeecCCCCCcccccccccccccccccccCCCChHHHHHHHHHHHHHHHHHHHhcCccccCccchhhhhhHHH
Q 002864 250 PYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFA 329 (872)
Q Consensus 250 ~yP~~kld~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~vt~~~w~d~WL~EGfa 329 (872)
|||++|+|+|++|+|..|||||||+++|++..++++ +.++...++.++.+||||+|||||||+|||+||+|+|||||||
T Consensus 213 ~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~-~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfA 291 (780)
T 1z5h_A 213 PYALPKMHLISVPEFGAGAMENWGAITFREIYMDIA-ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFA 291 (780)
T ss_dssp CCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHSCC-TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHH
T ss_pred CCCCccCCEEEcCCCCCCcccccCeeEeecceEeec-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCcccccccHHHH
Confidence 999999999999999999999999999999989998 6677778889999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhCcchhhHHHHHHHHH-HhhhccccCCCCceeeecCCchhhhhcccceeechhhHHHHHHHHhhCHHHHH
Q 002864 330 TWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQ 408 (872)
Q Consensus 330 ~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kga~vl~mL~~~lG~~~F~ 408 (872)
+|++++++++.+|+|.++..|..... .++..|+..++||+..++.++.+++..|+.++|.||++||+||+..||++.|+
T Consensus 292 ~y~~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~~~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~ 371 (780)
T 1z5h_A 292 TFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFR 371 (780)
T ss_dssp HHHHHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHH
Confidence 99999999999999998888876654 66888999999999988888888889999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCChHHHHHHHHhccCCcHHHHHHHhhcCCCcceEEEEEeCcEEEEEEEeeccCCCCCCCeeEEEEE
Q 002864 409 RSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPIT 488 (872)
Q Consensus 409 ~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~l~v~~~~~~i~l~Q~rf~~~~~~~~~~w~iPi~ 488 (872)
++||.|+++|+|++++++|||+++++++|.++++||++|++++|+|+++|++++++++|+|+||..++ .++..|+|||+
T Consensus 372 ~~l~~yl~~~~~~~~t~~Dl~~~l~~~sg~dl~~~~~~W~~~~G~P~l~v~~~~~~~~l~Q~~f~~~~-~~~~~w~iPi~ 450 (780)
T 1z5h_A 372 KGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNG-EEEGRWPVPVN 450 (780)
T ss_dssp HHHHHHHHHHTTEEECHHHHHHHHHHHHCSCHHHHHHHHHHSCSCEEEEEEESSSEEEEEEEECCSSC-CEECCCCEEEE
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHhCCCHHHHHHHHHhCCCCceEEEEecCcEEEEEEEEecCCC-CCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999998889999999998765 33458999999
Q ss_pred EEECcccceeeEEeeccceEEEecccccccccCCCCCCceEEecCCceeEEEEEcCHHHHHHHHHHHHcCCCChhhHHHH
Q 002864 489 LCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI 568 (872)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~ra~l 568 (872)
+ ++++. ...+ +..+ ++.++. . +||++|.++.|||||+||+++|..|.++| ..|++.+|+||
T Consensus 451 ~-~~~~~-~~~~-l~~~--~~~~~~----------~--~~i~~N~~~~gyyrv~Yd~~~~~~l~~~l--~~i~~~~Ra~l 511 (780)
T 1z5h_A 451 I-KKKDG-VERI-LLED--EASIEA----------D--GLIKINADSAGFYRVLYDDATFSDVMGHY--RDLSPLDRIGL 511 (780)
T ss_dssp E-EETTE-EEEE-EECS--SEEEEC----------T--TEEEESGGGCSSSEEECCHHHHHHHHHTG--GGCCHHHHHHH
T ss_pred E-cCCCc-eeee-ccCc--eEEccC----------C--ceEEEeCCCCEEEEEECCHHHHHHHHHHh--ccCCHHHHHHH
Confidence 9 43332 2334 5543 345542 2 79999999999999999999999999998 36899999999
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhcCCccCC
Q 002864 569 LDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKP 648 (872)
Q Consensus 569 i~D~~~la~~g~l~~~~~l~l~~~l~~e~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~ 648 (872)
|+|+|+||++|.++++.+|+|+.||++|++|+||.+++..|.++..+ . +.|+.|+.+++.++++++| .+
T Consensus 512 i~D~~~l~~~g~~~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~~~~~--~------~~~~~~~~~l~~~~~~~l~--~~- 580 (780)
T 1z5h_A 512 VDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRML--T------HAFDDDARAFCRSRMQFLT--GK- 580 (780)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHGGGTTCCCHHHHHHHHHHHHHHHTT--C------STTHHHHHHHHHHHHHHHT--TC-
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHhc--h------HHHHHHHHHHHHHHHHHcC--CC-
Confidence 99999999999999999999999999999999999999999888765 2 2488999999999999999 22
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCC
Q 002864 649 GESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETD 728 (872)
Q Consensus 649 ~~~~~~~~lr~~il~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~ 728 (872)
+++.+..+|..++.+||.+|+++|++ |+++|+.| ..||||+|.+|||+++ ++|++ |++++++|++++
T Consensus 581 -~~~~~~~~r~~~~~~a~~~~~~~~~~-a~~~f~~~------~~i~~~lr~~v~~~~~---~~g~~--~~~l~~~~~~~~ 647 (780)
T 1z5h_A 581 -QDENLKIALGRVSRLYVMVDESYAEE-MSKLFKDF------DSAEPEMRSSIATAYA---LVTGD--LKGLLEKFRSVD 647 (780)
T ss_dssp -CCHHHHHHHHHHHHHHHHHCHHHHHH-HHTTGGGG------GGSCHHHHHHHHHHHH---HHTCC--HHHHHHHHHSCC
T ss_pred -CChHHHHHHHHHHHHHHhcCCHHHHH-HHHHHHhc------CCCCHHHHHHHHHHHH---HcCcH--HHHHHHHHhcCC
Confidence 78899999999999999999999999 99999998 2599999999988765 46776 999999999999
Q ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHhhcCcCCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCCcchHHHH
Q 002864 729 LSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSGFLITRFI 805 (872)
Q Consensus 729 ~~~ek~~il~aL~c~~d~~~l~~~L~~~l~~~i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~~~l~~~i 805 (872)
+++||..++.||||++|+++++++|++++++.++.||...++. ++.+ |++++|+|+++||+.|.+++++.+.+.++|
T Consensus 648 ~~~~~~~~l~al~~~~~~~~~~~~l~~~~~~~i~~qd~~~~~~~~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~~~~i 727 (780)
T 1z5h_A 648 RDEDRVRIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDRIIRLVIRYFTGNRTASRTV 727 (780)
T ss_dssp SHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTSHHHHHHHHHTHHHHHHHHHHHHCSSSHHHHHH
T ss_pred CHHHHHHHHHHhccCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 9999999999999999999999999999986799999999988 7655 999999999999999999998667889999
Q ss_pred HHhhccCCCHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhcCh
Q 002864 806 SSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNE 857 (872)
Q Consensus 806 ~~~~~~~~t~~~~~~~~~f~~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~ 857 (872)
..+ +.|+|++ ++++++||+.++.+...+++++++|+|+.|++|++++.+.
T Consensus 728 ~~~-~~~~t~~-~~~~~~f~~~~~~~~~~~~~~~~~e~i~~n~~w~~~~~~~ 777 (780)
T 1z5h_A 728 EMM-IPVIGLD-HPDAEDIVRNIGSKNISMGLAKGIEMLAVNRKLVERIRQT 777 (780)
T ss_dssp HHH-HHHHHHH-CTTHHHHHHTTCCTTSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred Hhh-hccCCHH-HHHHHHHHccCCCccHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 999 9999999 9999999998766678899999999999999999998654
No 5
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=1e-94 Score=872.38 Aligned_cols=717 Identities=18% Similarity=0.233 Sum_probs=574.9
Q ss_pred CCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEecCceeeEEEEEeccCCCCccccCeeEEEecCC
Q 002864 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEAD 85 (872)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~~~ 85 (872)
++||+|...+| ||+|+++++++..+++|+++|++. .+++.|+||+.+ +|.+|++++. + ..+..++
T Consensus 9 ~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~--~~~~~i~Ld~~~-~I~sv~v~g~---------~--~~~~~~~ 73 (867)
T 2gtq_A 9 KDYQTPAYHIL-KTDLHFDINEPQTVVKSRLTVEPQ--RVGEPLVLDGSA-KLLSVKINGA---------A--ADYVLEG 73 (867)
T ss_dssp GGCCCCSEEEE-EEEEEEEECSSCEEEEEEEEEEES--STTSCEEEECCS-EEEEEEETTE---------E--CCCEEET
T ss_pred cccCCCCCcee-EEEEEEEEECCcEEEEEEEEEEEe--CCCCEEEEecCC-CEEEEEECCe---------e--cceEeeC
Confidence 56788876666 899999999998889988887753 347889999999 9999998641 1 2334445
Q ss_pred eEEEEEeCCCcCCceEEEEEEEEeee--cCCCcceEEeeeccCCeeecccccCCCcccccccccccCCCCce----EEEE
Q 002864 86 EILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACK----ITLD 159 (872)
Q Consensus 86 ~~l~i~l~~~L~~g~~~L~i~y~g~~--~~~~~G~~~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~k----l~i~ 159 (872)
+.++|. +|++|.++|+|.|++.+ ++...|+|++. .++.|||||.+||+||||+|+|+.| ++|+
T Consensus 74 ~~L~I~---~lp~g~~~l~I~y~~~p~~~~~~~Gly~s~--------~~~~Tq~ep~~AR~~fPc~DeP~~katf~itIt 142 (867)
T 2gtq_A 74 ETLTIA---GVPSERFTVEVETEILPAENKSLMGLYASG--------GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIV 142 (867)
T ss_dssp TEEEES---CCCSSCEEEEEEEEECGGGCCSCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCBEEEEEEE
T ss_pred CEEEEE---ecCCCcEEEEEEEEEeccCCCCCcEEEEEC--------CEEEEeeccCCCceeeccCCCCCcceEEEEEEE
Confidence 678775 46668999999999865 34567999863 3778999999999999999999999 9999
Q ss_pred ecCC-C-eeeecCccccee-ecCCeEEEEEecCCCccceeeEEEEeeeeEeecc--cc--CCeEEEEEEcCCchhhHHHH
Q 002864 160 VPSE-L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TS--DGIKVRVYCQVGKANQGKFA 232 (872)
Q Consensus 160 ~p~~-~-~~~sng~~~~~~-~~~~~~~~~f~~t~~~~~yl~a~~vg~f~~~~~~--~~--~g~~v~v~~~~~~~~~~~~~ 232 (872)
+|++ | +++|||+++++. ..+++++++|+.++|||+|++||++|+|..++.. +. .++++++|++|+..+.++++
T Consensus 143 ~p~~~y~~~lSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~a 222 (867)
T 2gtq_A 143 ADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFA 222 (867)
T ss_dssp EETTTCCEEEESSEEEEEEECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHH
T ss_pred EccccceEEEeCCccccceeecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccccHHHHHHH
Confidence 9997 6 899999988764 3577889999999999999999999999988752 22 24899999999999899999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCCcccccccccccccccccccCCCChHHHHHHHHHHHHHHHHHHHhcC
Q 002864 233 LNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 312 (872)
Q Consensus 233 l~~~~~~l~~~e~~~g~~yP~~kld~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn 312 (872)
++.+.+++++|+++||+|||++|+++|++|+|..|||||||+++|++..+++++..++...++.+..+||||+|||||||
T Consensus 223 l~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfGn 302 (867)
T 2gtq_A 223 VESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGN 302 (867)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999887777778889999999999999999
Q ss_pred ccccCccchhhhhhHHHHHHHHHHHhhhCcch-hhHHHHHHHHHHhhhccccCCCCceeeecCCchhhhhcccceeechh
Q 002864 313 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKG 391 (872)
Q Consensus 313 ~vt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg 391 (872)
+|||+||+++|||||||+|++..+..+..+.. .............+..|....+||+.. .++.+++..|+.++|.||
T Consensus 303 lVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~KG 380 (867)
T 2gtq_A 303 RVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPVRP--ASYEEMNNFYTMTVYEKG 380 (867)
T ss_dssp TBEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSTTCCCSSC--SEESCGGGGCSHHHHHHH
T ss_pred EEEecccccccchHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhhhccCccCCCCcC--CChhhhhhhccchhhhHH
Confidence 99999999999999999999988888776532 111111000112356688888899864 234567788999999999
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCcHHHHHHHhhcCCCcceEEEEEe--Cc--EEEE
Q 002864 392 ASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVK--EE--KLEL 467 (872)
Q Consensus 392 a~vl~mL~~~lG~~~F~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~l~v~~~--~~--~i~l 467 (872)
++|||||+..||++.|+++|+.|+++|++++++++|||+++++++|.|+..| ++|++++|+|+++|++. .+ +++|
T Consensus 381 a~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~~t~~Df~~~l~~~sg~dl~~f-~~W~~q~G~P~l~v~~~~~~~~~~l~l 459 (867)
T 2gtq_A 381 AEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQF-ALWYSQAGTPVLEAEGRLKNNIFELTV 459 (867)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHTCCCGGG-GHHHHCCSCCEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCCHHHH-HHHhcCCCCceEEEEEEecCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999999985 79999999999999975 34 4889
Q ss_pred EEEeeccCCCCCCCeeEEEEEEEECc--ccc-----------eeeEEeeccceEEEecccccccccCCCCCCceEEecCC
Q 002864 468 EQSQFLSSGSPGDGQWIVPITLCCGS--YDV-----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVN 534 (872)
Q Consensus 468 ~Q~rf~~~~~~~~~~w~iPi~~~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~ 534 (872)
+|+++...+..+...|+|||++...+ +.. ...++++.+++++.++.+ ... .|+.+|.+
T Consensus 460 ~Q~~~~~~~~~~~~~~~iPi~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~--p~~~l~r~ 530 (867)
T 2gtq_A 460 KQTVPPTPDMTDKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGV-------TEA--VVPSLLRG 530 (867)
T ss_dssp EEECCCBTTBSCCCCCCEEEEEEEECTTCCBCCEECSSCEESCEEEEECSSEEEEEEBCC-------CSC--CEEEESTT
T ss_pred EEecCCCCCCCCCceEEEEEEEEEEcCCCcccccccccccccceEEEEcCCceEEEEeCC-------CCC--CceEecCC
Confidence 99998655544456899999997643 211 123667888888888742 223 69999999
Q ss_pred ceeEEEEEcCHHHHHHHHHHHHcCCCChhhHHHH---HHHHHHH-----HHcCCC-C-HHHHHHHHHhcc-CCC-cHHHH
Q 002864 535 QTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI---LDDHFAL-----CMARQQ-T-LTSLLTLMASYS-EET-EYTVL 602 (872)
Q Consensus 535 ~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~ra~l---i~D~~~l-----a~~g~l-~-~~~~l~l~~~l~-~e~-~~~~w 602 (872)
..+++||+|+-..+.. ...+..+. ++.+|.+. +.|...+ +.+|.. + +..+++++.++. +|. ++.+|
T Consensus 531 fs~~~~l~~~~~~~~l-~~l~~~~~-d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (867)
T 2gtq_A 531 FSAPVHLNYPYSDDDL-LLLLAHDS-DAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLLDNAFK 608 (867)
T ss_dssp CCSSCEEECCCCHHHH-HHHHHHCS-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCHHHH
T ss_pred CCccEEEECCCCHHHH-HHHHhhCC-ChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCCCHHHH
Confidence 9999999977655533 23233222 47888766 8888888 667766 7 889999999865 777 99999
Q ss_pred HHHHH--HHHHHHHHHhccChhH----HHHHHH-HHHHH---HHHHHHhc-----C-CccCCCCCHHHHHHHHHHHHHHH
Q 002864 603 SNLIT--ISYKIGRIAADARPEL----LDYLKQ-FFISL---FQNSAEKL-----G-WDSKPGESHLDALLRGEIFTALA 666 (872)
Q Consensus 603 ~~~~~--~l~~l~~~~~~~~~~~----~~~~~~-~~~~l---~~~~~~~l-----g-~~~~~~~~~~~~~lr~~il~~ac 666 (872)
..++. .+..|...+..-+|+. ...++. +...+ +.++|+++ | |+.+. ++...+.||..++.++|
T Consensus 609 a~~l~lp~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~lr~~~l~~l~ 687 (867)
T 2gtq_A 609 ALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLPKWHELNRQAAKQENQSYEYSP-EAAGWRTLRNVCRAFVL 687 (867)
T ss_dssp HHHTCCCCHHHHTTTCSSBCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCSCCH-HHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCh-HHHHHHHHHHHHHHHHH
Confidence 99998 5677766432222333 233444 44445 78888877 7 87654 77888999999999999
Q ss_pred hcCCHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCH
Q 002864 667 LLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDV 746 (872)
Q Consensus 667 ~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~il~aL~c~~d~ 746 (872)
..| ++|++.|.++|.+...+ .+..++.++ +++.. .+.++++.|+.++++|+++....+|..++. ||++++
T Consensus 688 ~~~-~~~~~~a~~~~~~~a~n--mt~~~~al~--~l~~~---~~~~~~~~~~~f~~~~~~~~~~~~k~~~~~--a~~~~~ 757 (867)
T 2gtq_A 688 RAD-PAHIETVAEKYGEMAQN--MTHEWGILS--AVNGN---ESDTRNRLLAQFADKFSDDALVMDKYFALV--GSSRRS 757 (867)
T ss_dssp HHC-TTHHHHHHHTHHHHCSS--HHHHHHHHH--HHTTC---CSHHHHHHHHHHHHHTTTCHHHHHHHHHHH--HHCCST
T ss_pred hcC-ccHHHHHHHHHHHhCCC--HhHHHHHHH--HHHhc---CcccHHHHHHHHHHHHcCCchHHHHHHHHH--hcCCCh
Confidence 999 99999999999976432 334556666 34332 234567789999999999988899998887 688899
Q ss_pred HHHHHHHHHhhcC--cC-Ccccceeeee-ec
Q 002864 747 NIVLEVLNFLLSS--EV-RSQDAVYGLA-VS 773 (872)
Q Consensus 747 ~~l~~~L~~~l~~--~i-~~qd~~~~~~-v~ 773 (872)
+.+++++.+..++ ++ .++++..++. ++
T Consensus 758 ~~~~~v~~l~~~~~f~~~npn~~r~l~~~~~ 788 (867)
T 2gtq_A 758 DTLQQVRTALQHPKFSLENPNKARSLIGSFS 788 (867)
T ss_dssp THHHHHHHHTTSTTCCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCcCCCcCCchHHHHHHHHHh
Confidence 9999999999987 43 4555555555 54
No 6
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=2.3e-86 Score=796.24 Aligned_cols=703 Identities=19% Similarity=0.244 Sum_probs=528.1
Q ss_pred CCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEecCceeeEEEEEeccCCCCccccCeeEEEecCC
Q 002864 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEAD 85 (872)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~~~ 85 (872)
..+|+|...+| ||+|++++++...+++|+++|++... +++.|+||+.+|+|.+|.+++. +.. .++.++
T Consensus 32 ~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~~~-~~~~l~Ld~~~L~I~sV~v~G~---------~l~-~y~~~~ 99 (891)
T 3b34_A 32 HDYRAPDYQIT-DIDLTFDLDAQKTVVTAVSQAVRHGA-SDAPLRLNGEDLKLVSVHINDE---------PWT-AWKEEE 99 (891)
T ss_dssp GGCCCCSEEEE-EEEEEEECCSSCEEEEEEEEEEECSC-TTCCEEEECSSCEEEEEEETTE---------ECC-SEEEET
T ss_pred hhCCCCCceeE-EEEEEEEEECCceEEEEEEEEEEccC-CCCEEEEECCCCEEEEEEEcCE---------Ecc-eEEeeC
Confidence 45677776665 89999999999999999999887654 5678999999999999998652 111 345556
Q ss_pred eEEEEEeCCCcCCceEEEEEEEEeeec--CCCcceEEeeeccCCeeecccccCCCcccccccccccCCCCce----EEEE
Q 002864 86 EILVLEFAETLPTGMGVLAIGFEGVLN--DKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACK----ITLD 159 (872)
Q Consensus 86 ~~l~i~l~~~L~~g~~~L~i~y~g~~~--~~~~G~~~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~k----l~i~ 159 (872)
+.++|. +|+ +.++|+|.|++.+. ....|+|++. .+++|||||.+||+||||+|+|+.| ++|+
T Consensus 100 ~~L~I~---~lp-~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~itI~ 167 (891)
T 3b34_A 100 GALVIS---NLP-ERFTLKIINEISPAANTALEGLYQSG--------DALCTQCEAEGFRHITYYLDRPDVLARFTTKII 167 (891)
T ss_dssp TEEEEC---SCC-SEEEEEEEEEECGGGCCSCCEEEEET--------TEEEEECTTTTGGGTSSBCCSTTCCEEEEEEEE
T ss_pred CEEEEE---eCC-CeEEEEEEEEEeecccCCCceEEEeC--------CEEEeccccCCCCccccCCCCcccceEEEEEEE
Confidence 788885 343 68999999998753 4567999863 2678999999999999999999999 9999
Q ss_pred ecCC-C-eeeecCccccee-ecCCeEEEEEecCCCccceeeEEEEeeeeEeecc--ccC--CeEEEEEEcCCchhhHHHH
Q 002864 160 VPSE-L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TSD--GIKVRVYCQVGKANQGKFA 232 (872)
Q Consensus 160 ~p~~-~-~~~sng~~~~~~-~~~~~~~~~f~~t~~~~~yl~a~~vg~f~~~~~~--~~~--g~~v~v~~~~~~~~~~~~~ 232 (872)
+|++ | +++|||+++++. ..+++++++|+.++|||+|++||+||+|.+++.. +.+ ++++++|++|+..+.++++
T Consensus 168 ~p~~~y~~alSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~a 247 (891)
T 3b34_A 168 ADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWA 247 (891)
T ss_dssp EETTTCCEEEESSEEEEEEECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCHHH
T ss_pred eccccceEEEeCCccccceeecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHHHH
Confidence 9997 6 899999988764 3677889999999999999999999999988742 223 4899999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCCcccccccccccccccccccCCCChHHHHHHHHHHHHHHHHHHHhcC
Q 002864 233 LNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 312 (872)
Q Consensus 233 l~~~~~~l~~~e~~~g~~yP~~kld~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn 312 (872)
++.+.+++++|+++||+|||++|+++|++|+|..|||||||+++|++..+|+++..++...++.+..+||||+|||||||
T Consensus 248 l~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFGN 327 (891)
T 3b34_A 248 MTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGN 327 (891)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999998887777778889999999999999999
Q ss_pred ccccCccchhhhhhHHHHHHHHHHHhhhCcchhhHHHHHH--HHH-HhhhccccCCCCceeeecCCchhhhhcccceeec
Q 002864 313 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLD--ECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYR 389 (872)
Q Consensus 313 ~vt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~ 389 (872)
+|||+||+++|||||||+|++..+.....+... ..+.. ... ..+..|+...+||+.. .++.+++..|+.++|.
T Consensus 328 lVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~--~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~ 403 (891)
T 3b34_A 328 RVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAV--NRINNVRTMRGLQFAEDASPMAHPIRP--DMVIEMNNFYTLTVYE 403 (891)
T ss_dssp TEEESSGGGHHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHTHHHHHTSTTCCCSSC--SEESCGGGGCCHHHHH
T ss_pred CCcccchhhceehHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHhhhhhhccccCCCCcc--ccccccccccccchhh
Confidence 999999999999999999999888887766421 11111 111 2356688888899754 2345677889999999
Q ss_pred hhhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCcHHHHHHHhhcCCCcceEEEEEeC----c--
Q 002864 390 KGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKE----E-- 463 (872)
Q Consensus 390 Kga~vl~mL~~~lG~~~F~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~l~v~~~~----~-- 463 (872)
||++|||||+..||++.|+++|+.|+++|++++++++|||+++++++|.+++.| ++|++++|+|+++|++.. +
T Consensus 404 KGa~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~att~Df~~ale~~sg~dL~~f-~~W~~q~G~P~l~V~~~~~~~~~~~ 482 (891)
T 3b34_A 404 KGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHF-RRWYSQSGTPIVTVKDDYNPETEQY 482 (891)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHCCCCTTT-THHHHCCSCCEEEEEEEEETTTTEE
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHH-HHHHcCCCCceEEEEEEeecCCCEE
Confidence 999999999999999999999999999999999999999999999999999985 799999999999998752 2
Q ss_pred EEEEEEEeeccCCCCCCCeeEEEEEEEECc--ccc----------eeeEEeeccceEEEecccccccccCCCCCCceEEe
Q 002864 464 KLELEQSQFLSSGSPGDGQWIVPITLCCGS--YDV----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKL 531 (872)
Q Consensus 464 ~i~l~Q~rf~~~~~~~~~~w~iPi~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~ 531 (872)
+++|+|+|+...+......|+|||++.+.+ +.. ...++++.+++++.++.+ ... .|+.+
T Consensus 483 ~ltl~Q~~~~~~~~~~~~~~~iPi~v~l~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v-------~~~--P~~~l 553 (891)
T 3b34_A 483 TLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNV-------YFQ--PVPAL 553 (891)
T ss_dssp EEEEEEECCCBTTBSCCCCCCEEEEEEEECTTSCBCCCEETTEECCSEEEECSSEEEEEECCC-------CSC--CEEEE
T ss_pred EEEEEEecCCCCCCCCCceEEEEEEEEEEcCCCCcccccccccccceEEEecCCcEEEEEccC-------CCC--CcEEE
Confidence 589999997655544556899999997643 211 124678888888888742 233 79999
Q ss_pred cCCceeEEEEEcCHHHHHHHHHHHHcCCCChhhHHHHHHHHHHHHH--------cCC-CC-HHHHHHHHHh-ccCCC-cH
Q 002864 532 NVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCM--------ARQ-QT-LTSLLTLMAS-YSEET-EY 599 (872)
Q Consensus 532 N~~~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~ra~li~D~~~la~--------~g~-l~-~~~~l~l~~~-l~~e~-~~ 599 (872)
|.+..|||||+||..+|..+..... .-+..+|.+.+.+++.... .|. +. ...+++.+.. |..+. +.
T Consensus 554 ~~~~s~~~~v~~~~~~~~l~~~l~~--d~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 631 (891)
T 3b34_A 554 LCEFSAPVKLEYKWSDQQLTFLMRH--ARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDP 631 (891)
T ss_dssp STTCCSSCEEECCCCHHHHHHHHHH--CSSHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCH
T ss_pred cCCCcceEEEeCCCCHHHHHHHHhh--CCChhHHHHHHHHHHHHHHHHHHHhhhcCCCcCccHHHHHHHHHHhcCCCcCH
Confidence 9999999999999998877754332 2357788888877766543 221 12 2446666655 33322 32
Q ss_pred HHHHHH--HHHHHHHHHHHhccChhHHHHHHHHHHH--------HHHHHHHhcCCccC---CCCCHHHHHHHHHHHHHHH
Q 002864 600 TVLSNL--ITISYKIGRIAADARPELLDYLKQFFIS--------LFQNSAEKLGWDSK---PGESHLDALLRGEIFTALA 666 (872)
Q Consensus 600 ~~w~~~--~~~l~~l~~~~~~~~~~~~~~~~~~~~~--------l~~~~~~~lg~~~~---~~~~~~~~~lr~~il~~ac 666 (872)
..-..+ +.....|...+..-+|+.....++.++. .+..+|+++- ... ..+....+.||...+.++|
T Consensus 632 ~~~a~~l~lp~~~~~~~~~~~~d~~~i~~~r~~~~~~la~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~l~n~~l~~l~ 710 (891)
T 3b34_A 632 ALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANY-QSEYRVEHEDIAKRTLRNACLRFLA 710 (891)
T ss_dssp HHHHHHTSCCCHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC-CSSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 222221 1123344443332224433333333333 3455666653 211 1123456899999999999
Q ss_pred hcCCHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCH
Q 002864 667 LLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDV 746 (872)
Q Consensus 667 ~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~il~aL~c~~d~ 746 (872)
..+..+..+.|.+.|+.- + +- .|-..+ +.+++..-....++..+...++++...-.-+|.-.+.|.+.. +
T Consensus 711 ~~~~~~~~~~~~~~~~~a--~-nm----td~~~a-l~~~~~~~~~~~~~~l~~f~~~~~~~~lv~~kwf~~qa~~~~--~ 780 (891)
T 3b34_A 711 FGETHLADVLVSKQFHEA--N-NM----TDALAA-LSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPA--A 780 (891)
T ss_dssp TSCHHHHHHHHHHHHHHC--S-SH----HHHHHH-HHHHHHTTCTTHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCC--T
T ss_pred hCCCchHHHHHHHHHhhC--C-Ch----HHHHHH-HHHHhccCcchHHHHHHHHHHHhccCcHHHHHHHHHHhCCCC--c
Confidence 988667778888888863 1 11 122222 222222100134566788888888776677888888775544 4
Q ss_pred HHHHHHHHHhhcC
Q 002864 747 NIVLEVLNFLLSS 759 (872)
Q Consensus 747 ~~l~~~L~~~l~~ 759 (872)
+.+.+.-.+.-.+
T Consensus 781 ~~~~~v~~l~~h~ 793 (891)
T 3b34_A 781 NVLETVRGLLQHR 793 (891)
T ss_dssp THHHHHHHHTTCT
T ss_pred cHHHHHHHHhcCC
Confidence 4555554444333
No 7
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=6.2e-86 Score=786.33 Aligned_cols=701 Identities=20% Similarity=0.249 Sum_probs=511.8
Q ss_pred CCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEecCceeeEEEEEeccCCCCccccCeeEEEecCCeEEEE
Q 002864 11 PKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVL 90 (872)
Q Consensus 11 p~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~i 90 (872)
|+.+...||+|+++++++...++|+++|++....+++.|+||+.+|+|.+|.+++. .+.. ...+..+++.++|
T Consensus 11 ~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG~------~l~~-~~~~~~~~~~L~I 83 (889)
T 3ebh_A 11 PSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINNK------KLVE-GEEYTYDNEFLTI 83 (889)
T ss_dssp CCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETTE------ECCB-TTTEEECSSEEEE
T ss_pred CCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECCE------EcCc-ccceEecCCEEEE
Confidence 55688899999999999999999999999877666789999999999999999652 1110 0024556788999
Q ss_pred EeCCCcCCceEEEEEEEEeeec--CCCcceEEeeeccCCeeecccccCCCcccccccccccCCCCce----EEEEecCC-
Q 002864 91 EFAETLPTGMGVLAIGFEGVLN--DKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACK----ITLDVPSE- 163 (872)
Q Consensus 91 ~l~~~L~~g~~~L~i~y~g~~~--~~~~G~~~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~k----l~i~~p~~- 163 (872)
.++. |+++.++|+|.|++.+. ..+.|+|++. .+++|||||.+||+||||||+|++| ++|++|++
T Consensus 84 ~l~~-l~~~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~ 154 (889)
T 3ebh_A 84 FSKF-VPKSKFAFSSEVIIHPETNYALTGLYKSK--------NIIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEK 154 (889)
T ss_dssp CGGG-SCSSSEEEEEEEEECGGGCTTCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTT
T ss_pred ecCC-CCCCcEEEEEEEEecCccCCCceeeEEEC--------CeEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEcccc
Confidence 8765 65469999999999863 4578999864 3778999999999999999999999 99999997
Q ss_pred C-eeeecCccccee-ecCCeEEEEEecCCCccceeeEEEEeeeeEeecc--cc-C--CeEEEEEEcCCchhhHHHHHHHH
Q 002864 164 L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TS-D--GIKVRVYCQVGKANQGKFALNVA 236 (872)
Q Consensus 164 ~-~~~sng~~~~~~-~~~~~~~~~f~~t~~~~~yl~a~~vg~f~~~~~~--~~-~--g~~v~v~~~~~~~~~~~~~l~~~ 236 (872)
| +++|||+++++. ..+++++++|+.++|||+|++||+||+|.+++.. +. + ++++++|++|+..+.++++++.+
T Consensus 155 ~~valSNg~l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~ 234 (889)
T 3ebh_A 155 YPVLLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECL 234 (889)
T ss_dssp CCEEEESSEEEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHH
T ss_pred CeEEEccCccccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHH
Confidence 8 579999988763 4678889999999999999999999999988743 22 3 48899999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCcceeecCCCCCcccccccccccccccccccCCCChHHHHHHHHHHHHHHHHHHHhcCcccc
Q 002864 237 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 316 (872)
Q Consensus 237 ~~~l~~~e~~~g~~yP~~kld~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~vt~ 316 (872)
.+++++||++||+|||++|+++|++|+|..|||||||+++|++..+|+++..++...++.+..+||||+|||||||+|||
T Consensus 235 ~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~ 314 (889)
T 3ebh_A 235 KKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTL 314 (889)
T ss_dssp HHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEE
T ss_pred HHHHHHHHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeee
Confidence 99999999999999999999999999999999999999999999999998877777788899999999999999999999
Q ss_pred CccchhhhhhHHHHHHHHHHHhhhCcchh-hHHHHHHHHHHhhhccccCCCCceeeecCCchhhhhcccceeechhhHHH
Q 002864 317 EWWTHLWLNEGFATWVSYLAADSLFPEWK-IWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 395 (872)
Q Consensus 317 ~~w~d~WL~EGfa~y~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kga~vl 395 (872)
+||+|+|||||||+|++.++.....+... ............+..|....+||+.. ..+.+++..|+.++|.||++||
T Consensus 315 ~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~--~~~~ei~~~f~~i~Y~KGa~vL 392 (889)
T 3ebh_A 315 RDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRP--ESYVSMENFYTTTVYDKGSEVM 392 (889)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSC--SEESCGGGCCCHHHHHHHHHHH
T ss_pred cccccceeeHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCC--cchhhhhhhccchhhhHHHHHH
Confidence 99999999999999999888877655421 11111110112366688888888753 2345677889999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhcc-------CCcHHHHHHHhhcCCCcceEEEEEeC----c-
Q 002864 396 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGS-------GEPVNKLMNSWTKQKGYPVISVKVKE----E- 463 (872)
Q Consensus 396 ~mL~~~lG~~~F~~~lr~yl~~~~~~~~~~~df~~~l~~~~-------~~~l~~~~~~W~~~~g~P~l~v~~~~----~- 463 (872)
|||+..||++.|+++|+.|+++|+|++++++|||+++++++ |.++.. |++|++|+|+|+|+|+++. +
T Consensus 393 rML~~~lGde~F~~gLr~Yl~~~~~~natt~Df~~ale~as~~~~~~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~~ 471 (889)
T 3ebh_A 393 RMYLTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKKQ 471 (889)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSEECHHHHHHHHHHHHHHHHTCTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTTE
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhccCCCCCCHHH-HHHHhcCCCCceEEEEEeecCCCCE
Confidence 99999999999999999999999999999999999999999 999995 6899999999999999764 2
Q ss_pred -EEEEEEEeeccCCCCCCCeeEEEEEEEECcc---cc---eeeEEeeccceEEEecccccccccCCCCCCceEEecCCce
Q 002864 464 -KLELEQSQFLSSGSPGDGQWIVPITLCCGSY---DV---CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQT 536 (872)
Q Consensus 464 -~i~l~Q~rf~~~~~~~~~~w~iPi~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~ 536 (872)
+++|+|.++...+......|.|||++...+. .. ...+.++.+++++.++.+. .. .+..+|.+..
T Consensus 472 ~~ltl~Q~~~~~~~~~~~~~~~IPl~v~l~~~~~G~~~~~~~~l~l~~~~q~f~~~~~~-------~~--p~~sl~r~fs 542 (889)
T 3ebh_A 472 YSIHVNQYTKPDENQKEKKPLFIPISVGLINPENGKEMISQTTLELTKESDTFVFNNIA-------VK--PIPSLFRGFS 542 (889)
T ss_dssp EEEEEEEECCCCSSCSSCCCCCEEEEEEEECTTTCCBCSCCEEEEECSSEEEEEESCCC-------SC--CEEEESTTCC
T ss_pred EEEEEEEecCCCCCCCCCceEEEEEEEEEEeCCCCccccceeEEEecCCcEEEEEcCCC-------CC--CeEEEcCCCC
Confidence 6899998876666555669999999987332 21 2346788889999997531 22 5778999999
Q ss_pred eEEEEEcC--HHHHHHHHHHHHcCCCChhhHHHHHH--------HHHHHHHcC---------CCCH-HHHHHHHHhc-cC
Q 002864 537 GFYRVKYD--KDLAARLGYAIEMKQLSETDRFGILD--------DHFALCMAR---------QQTL-TSLLTLMASY-SE 595 (872)
Q Consensus 537 gyyRV~Yd--~~~w~~l~~~l~~~~i~~~~ra~li~--------D~~~la~~g---------~l~~-~~~l~l~~~l-~~ 595 (872)
+++|++|+ .+.+..|... +. +..+|.+-.. +...-...| .... ..+++.+..+ ..
T Consensus 543 a~v~l~~~~~~~~l~~l~~~---d~-d~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 618 (889)
T 3ebh_A 543 APVYIEDQLTDEERILLLKY---DS-DAFVRYNSCTNIYMKQILMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLED 618 (889)
T ss_dssp SSSEEECCCCHHHHHHHHHH---CS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCCHHHHHHHHHHHTC
T ss_pred ceEEEeCCCCHHHHHHHHhh---CC-ChhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCHHHHHHHHHHHcC
Confidence 99999977 4544443332 11 1222221111 111101111 1111 2344444432 22
Q ss_pred C-CcHHHHHHHHHH--HHHHHHHHhccChhHHHHHHHHH--------HHHHHHHHHhcC------------CccCCCCCH
Q 002864 596 E-TEYTVLSNLITI--SYKIGRIAADARPELLDYLKQFF--------ISLFQNSAEKLG------------WDSKPGESH 652 (872)
Q Consensus 596 e-~~~~~w~~~~~~--l~~l~~~~~~~~~~~~~~~~~~~--------~~l~~~~~~~lg------------~~~~~~~~~ 652 (872)
+ -+...-..++.. ...|...+..-+|+....-+.++ ...+..+|+++. +.. ..+..
T Consensus 619 ~~~~~~~~a~~l~lp~~~~~~~~~~~~d~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 697 (889)
T 3ebh_A 619 PHADAGFKSYIVSLPQDRYIINFVSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHV-DFDQM 697 (889)
T ss_dssp TTSCHHHHHHHTSCCCHHHHGGGCTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTTTCTTCC-CHHHH
T ss_pred CCCCHHHHHHHhcCCCHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCC-CHHHH
Confidence 1 222222222211 11122211111122212222222 222233343321 111 12334
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHH
Q 002864 653 LDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQE 732 (872)
Q Consensus 653 ~~~~lr~~il~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~e 732 (872)
..+.||..++.++|..+.++..+.|.+.|+.- .---|-+.+.+++.. ...++..+...++|++..-.-+
T Consensus 698 ~~r~l~n~~l~~l~~~~~~~~~~~~~~~~~~a---------nmtd~~~al~~~~~~--~~~~~~l~~f~~~~~~~~lv~d 766 (889)
T 3ebh_A 698 NMRTLRNTLLSLLSKAQYPNILNEIIEHSKSP---------YPSNWLTSLSVSAYF--DKYFELYDKTYKLSKDDELLLQ 766 (889)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHHHHHHHHTTCS---------CHHHHHHHHHHGGGS--TTHHHHHHHHHHHHTTSHHHHH
T ss_pred HHHHHHHHHHHHHHhcCChhHHHHHHHHHhhc---------ChhHHHHHHHHHhcC--hhHHHHHHHHHHHhCCCcchhh
Confidence 56899999999999999888888888777632 112233333333331 1233467777778887777779
Q ss_pred HHHHHHHhCCCCC-HHHHHHHHHH
Q 002864 733 KTRILSSLASCPD-VNIVLEVLNF 755 (872)
Q Consensus 733 k~~il~aL~c~~d-~~~l~~~L~~ 755 (872)
|.-.+.|.+...| -+.+++++..
T Consensus 767 kwf~~qa~~~~~~~~~~v~~l~~h 790 (889)
T 3ebh_A 767 EWLKTVSRSDRKDIYEILKKLENE 790 (889)
T ss_dssp HHHHHHHTCCCTTHHHHHHHHHHH
T ss_pred HhHHHhhCCCCcCHHHHHHHHhcC
Confidence 9889989765555 4556666554
No 8
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.3e-79 Score=718.07 Aligned_cols=524 Identities=18% Similarity=0.277 Sum_probs=413.3
Q ss_pred CCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECC-CCEEEEEecCceeeEEEEEeccCCCCccccCeeEEEec-
Q 002864 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVE- 83 (872)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~- 83 (872)
..+|||..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|.+|.+.+..+. ..+..+..+.
T Consensus 18 ~~~~~p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~v~~~~g~----~~~~~~~~~~~ 93 (605)
T 3cia_A 18 YTYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVMAKNSQGQ----WVKVNYDLAKR 93 (605)
T ss_dssp SCCCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEEEEEEEEECTTCC----EEEECEEEEEE
T ss_pred ccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEcCCCC----ccceeEEecCc
Confidence 3579999999999999999999999999999999999876 789999999999999998310010 1122333332
Q ss_pred ---CCeEEEEEeCCCcCCceEEEEEEEEeeecCCCcceEEeee-ccCCeeecccccCCCcccccccccccCCCCce----
Q 002864 84 ---ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACK---- 155 (872)
Q Consensus 84 ---~~~~l~i~l~~~L~~g~~~L~i~y~g~~~~~~~G~~~~~y-~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~k---- 155 (872)
.++.++|.++ ++.++|+|.|+|.++. .|++...+ ..+|..+++++|||||++||+||||||+|+.|
T Consensus 94 ~~~~~~~l~i~l~----~~~~~l~i~y~~~~~~--~gl~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~katf~ 167 (605)
T 3cia_A 94 DDVLGSKLTINTP----LNAKKVRVYYNSTEKA--TGLQWLSAEQTAGKEKPFLFSQNQAIHARSWIPIQDTPSVRVTYT 167 (605)
T ss_dssp CSSSCEEEEECCC----TTCSEEEEEEEECTTC--TTEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCCTTCCEEEE
T ss_pred cccCCCeEEEEeC----CceEEEEEEEEEecCC--CceEEecccccCCCcccEEEecCcccChhhceecCCCcCceeEEE
Confidence 3567888765 3789999999998754 45544332 23566778889999999999999999999999
Q ss_pred EEEEecCCCeeeecCcccceeecCCeEEEEEecCCCccceeeEEEEeeeeEeeccccCCeEEEEEEcCCchhhHHHHHHH
Q 002864 156 ITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 235 (872)
Q Consensus 156 l~i~~p~~~~~~sng~~~~~~~~~~~~~~~f~~t~~~~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 235 (872)
++|++|++|+|+|||....+...++ +++|+.++|||+|++||+||+|..++ .|+++++|++|+..+.++++++.
T Consensus 168 i~i~~p~~~~alsng~~~~~~~~~~--~~~f~~t~pmstYl~a~~vg~f~~~~----~g~~~~v~~~p~~~~~~~~~~~~ 241 (605)
T 3cia_A 168 ARITTDKDLLAVMSANNEPGTERDG--DYFFSMPQAIPPYLIAIGVGDLEFKA----MSHQTGIYAESYILDAAVAEFDD 241 (605)
T ss_dssp EEEECCTTCEEEESSEEC----CCS--EEEEEEEEEECGGGCCEEEESCEEEE----SSSSEEEEECSTTHHHHHHHSTT
T ss_pred EEEEEcCCcEEEecCCccceecCCC--eEEEeeCCCccceeEEEEEeeeeEec----CCCeEEEEeccChHHHHHHHHHH
Confidence 9999999999999885433322333 78999999999999999999999876 36789999999998889999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeecC-CCCCcccccccccccccccccccCCCChHHHHHHHHHHHHHHHHHHHhcCcc
Q 002864 236 AVKTLELYKEYFAVPYSLPKLDMIAIP-DFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLV 314 (872)
Q Consensus 236 ~~~~l~~~e~~~g~~yP~~kld~v~~p-~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~v 314 (872)
+.+++++|+++|| |||++|+++|++| +|+.|||||||+ +|.+..++.++. ....+||||+|||||||+|
T Consensus 242 ~~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~gl-tf~~~~ll~~~~--------~~~~viaHElaHqWfGnlV 311 (605)
T 3cia_A 242 TQAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENPRL-SFITPTVVAGDK--------SLVNLIAHELAHSWSGNLV 311 (605)
T ss_dssp HHHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCTTE-EEECGGGCCSSS--------CSTHHHHHHHHHTTBTTTE
T ss_pred HHHHHHHHHHHhC-CCCCccccEEEECCccCCCcccCCcE-EEecchhccCcH--------HHHHHHHHHHHHHhhcccc
Confidence 9999999999999 9999999999994 999999999998 566665665543 1457999999999999999
Q ss_pred ccCccchhhhhhHHHHHHHHHHHhhhCcchhh--HHHHHHHHHHhhhcccc-CCCCceeeecCCchhhhhcccceeechh
Q 002864 315 TMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECTEGLRLDGL-AESHPIEVEVNHTGEIDEIFDAISYRKG 391 (872)
Q Consensus 315 t~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~-~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg 391 (872)
|++||+|+|||||||+|++++++++.+|++.. ...+....+.. .++.. ..++|+..++. ..+++..|+.++|.||
T Consensus 312 T~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~-~l~~~~~~~~pl~~~~~-~~~~~~~f~~i~Y~KG 389 (605)
T 3cia_A 312 TNESWRDLWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNA-EILELDASDTQLYIDLK-GRDPDDAFSGVPYVKG 389 (605)
T ss_dssp EESSTTSTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHSCTTTTSSSCCCT-TCCTTTSCCSHHHHHH
T ss_pred ccCcchHhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHH-HHHhhccCCCCcccCCC-CCChhHhhCccchhHH
Confidence 99999999999999999999999999887532 11111111111 12344 56788765554 2455778999999999
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCC----cHHH-HHHHhhcCCCcceEEEEEeCcEEE
Q 002864 392 ASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE----PVNK-LMNSWTKQKGYPVISVKVKEEKLE 466 (872)
Q Consensus 392 a~vl~mL~~~lG~~~F~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~----~l~~-~~~~W~~~~g~P~l~v~~~~~~i~ 466 (872)
++||+||+..+|++.|+++||.|+++|++++++++||++++++++|. ++.. +|++|++++|+|+++++.+.+.+
T Consensus 390 a~vl~mL~~~lG~e~F~~~lr~yl~~~~~~~~t~~df~~~l~~~~~~~~~~~l~~~~~~~W~~~~G~P~~~~~~~~~~~- 468 (605)
T 3cia_A 390 QLFLMYLEEKFGRERFDAFVLEYFDSHAFQSLGTDNFVKYLKANLTDKYPNIVSDNEINEWIFKAGLPSYAPQPTSNAF- 468 (605)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHTTTTTSTTSSCHHHHHHHHHSSSCCSSSCCCCCHHH-
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhccccccccchhhHHHHhcCCCCCceeccCCchHH-
Confidence 99999999999999999999999999999999999999999999875 5655 79999999999998876543110
Q ss_pred EEEEeeccCCCCCCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCCCceEEecCCceeEEEEEcCHH
Q 002864 467 LEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKD 546 (872)
Q Consensus 467 l~Q~rf~~~~~~~~~~w~iPi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~~ 546 (872)
++ .... ..-|+.... ....+.|++|+..
T Consensus 469 -~~-----------------------~~~l-~~~w~~~~~---------------------------~~~~~~~~~~~~~ 496 (605)
T 3cia_A 469 -KV-----------------------IDKQ-INQLVTDEL---------------------------TLEQLPTAQWTLH 496 (605)
T ss_dssp -HH-----------------------HHHH-TCCTTTTSS---------------------------CCSCSGGGGCCSH
T ss_pred -HH-----------------------HHHH-HHHHHhcCC---------------------------CccccchhhCCHH
Confidence 00 0000 001111100 0011238999999
Q ss_pred HHHHHHHHHHcCCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHH
Q 002864 547 LAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGR 614 (872)
Q Consensus 547 ~w~~l~~~l~~~~i~~~~ra~li~D~~~la~~g~l~~~~~l~l~~~l~~e~~~~~w~~~~~~l~~l~~ 614 (872)
+|..+.+.|.. .|+ .+|+++|||+|+|+.++.. ++.++.++++.++.++.+|..+...|..+-+
T Consensus 497 ~~~~~l~~l~~-~l~-~~~~~~l~~~~~~~~~~n~--ei~~~~~~~~~~~~~~~~~~~~~~~l~~~gr 560 (605)
T 3cia_A 497 EWLHFINNLPV-DLD-HQRMVNLDKAFDLTNSSNA--EIAHAWYLLSVRADYKEVYPAMAKYLKSIGR 560 (605)
T ss_dssp HHHHHHHHSCS-CCT-TC-CHHHHHHHCCSSCSSH--HHHHHHHHHHHHHTCGGGHHHHHHHHHHCCC
T ss_pred HHHHHHHhcCc-cCC-HHHHHHHHHhhCCCcCCCH--HHHHHHHHHHHhcCChhHHHHHHHHHHHcCC
Confidence 99999999976 788 9999999999998887655 5889999999999999999998877766543
No 9
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=1.1e-77 Score=704.32 Aligned_cols=440 Identities=25% Similarity=0.392 Sum_probs=378.6
Q ss_pred CCcCCCCc-eeeeEEEEEEecCCCCeEEEEEEEEEEEECC-CCEEEEEecCceeeEEEEEeccCCCCccccCeeEE----
Q 002864 7 QPRLPKFA-VPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVE---- 80 (872)
Q Consensus 7 ~~rLp~~v-~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~---- 80 (872)
++..|..+ ++.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|++|.+++. ...+.
T Consensus 6 s~a~p~~~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~I~~V~v~g~---------~~~~~~~~~ 76 (608)
T 3u9w_A 6 SLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQ---------EVKYALGER 76 (608)
T ss_dssp CCSCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETTE---------ECCEEECCC
T ss_pred cccCcccCCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCE---------Ecceecccc
Confidence 45778876 7999999999999999999999999999887 589999999999999998652 11221
Q ss_pred EecCCeEEEEEeCCCcCCc-eEEEEEEEEeeecCCCcceEEeeec-cCCeeecccccCCCcccccccccccCCCCce---
Q 002864 81 LVEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYE-LNGEKKNMAVTQFEPADARRCFPCWDEPACK--- 155 (872)
Q Consensus 81 ~~~~~~~l~i~l~~~L~~g-~~~L~i~y~g~~~~~~~G~~~~~y~-~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~k--- 155 (872)
.+..++.++|.++.+|++| .++|+|.|+|+++.. |++...+. ..|..+++++|||||.+||+||||+|+|+.|
T Consensus 77 ~~~~~~~l~I~l~~~l~~g~~~~l~I~y~~~~~~~--~~~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~Katf 154 (608)
T 3u9w_A 77 QSYKGSPMEISLPIALSKNQEIVIEISFETSPKSS--ALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTY 154 (608)
T ss_dssp CGGGCEEEEEEEEEEECTTCEEEEEEEEECCTTCT--TEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCSTTCCEEE
T ss_pred ccccCceEEEEcCCCCCCCCEEEEEEEEEEEcCCC--ceeeecccccCCCcceEEEEcccCCCCCEEEEecCccceeEEE
Confidence 2345678999999999999 999999999987654 44443333 3577788899999999999999999999999
Q ss_pred -EEEEecCCCeeeecCccccee---ecCCeEEEEEecCCCccceeeEEEEeeeeEeeccccCCeEEEEEEcCCchhhHHH
Q 002864 156 -ITLDVPSELVALSNMPVIDEK---VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKF 231 (872)
Q Consensus 156 -l~i~~p~~~~~~sng~~~~~~---~~~~~~~~~f~~t~~~~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~ 231 (872)
++|++|++++|+|||++.++. .++++++++|..++|||+|++||+||+|+..+ .|+++++|++|+..+.+++
T Consensus 155 ~i~I~~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~----~~~~~~v~~~p~~~~~~~~ 230 (608)
T 3u9w_A 155 TAEVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQ----IGPRTLVWSEKEQVEKSAY 230 (608)
T ss_dssp EEEEEEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESCEEEE----EETTEEEEECHHHHHHHHH
T ss_pred EEEeeCCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeeeeeEe----cCCceEEEeChhhHHHHHH
Confidence 999999999999999887653 23568899999999999999999999998765 3678899999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCcceeec-CCCCCcccccccccccccccccccCCCChHHHHHHHHHHHHHHHHHHHh
Q 002864 232 ALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWF 310 (872)
Q Consensus 232 ~l~~~~~~l~~~e~~~g~~yP~~kld~v~~-p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWf 310 (872)
+++.+.++|++||++|| |||++++++|++ |+|+.|||||||++++++..++.+.. +..+||||+|||||
T Consensus 231 ~~~~~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~---------~~~viaHElAHqWf 300 (608)
T 3u9w_A 231 EFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS---------LSNVIAHEISHSWT 300 (608)
T ss_dssp HTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST---------TTHHHHHHHHTTTB
T ss_pred HHHHHHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcCcceeeeeeeecccch---------hHHHHHHHhhhhhh
Confidence 99999999999999999 999999998887 79999999999999999995554433 45789999999999
Q ss_pred cCccccCccchhhhhhHHHHHHHHHHHhhhCcchhhHHHHHHHHH-HhhhccccCCCCceeeecCCchhh--hhccccee
Q 002864 311 GNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEI--DEIFDAIS 387 (872)
Q Consensus 311 Gn~vt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~--~~~f~~i~ 387 (872)
||+||++||+|+|||||||+|++++++++++|++.....+..... .....|....++|+..++.+..++ +..|+.++
T Consensus 301 GnlVT~~~W~d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~i~ 380 (608)
T 3u9w_A 301 GNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVP 380 (608)
T ss_dssp TTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHH
T ss_pred cCcCccccccchhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccccCChhhcccHHH
Confidence 999999999999999999999999999999998765544443332 234557777889988777665544 45799999
Q ss_pred echhhHHHHHHHHhhC-HHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCcHHHH----HHHhhcCCCcceEEEEEeC
Q 002864 388 YRKGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----MNSWTKQKGYPVISVKVKE 462 (872)
Q Consensus 388 Y~Kga~vl~mL~~~lG-~~~F~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~----~~~W~~~~g~P~l~v~~~~ 462 (872)
|.||+++||||+..|| ++.|+++||.|+++|+|++++++||+++++++++.+++.+ |++|++++|+|+|+|+++.
T Consensus 381 Y~KGa~vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~~~~~~~~~W~~~~G~P~v~v~~d~ 460 (608)
T 3u9w_A 381 YEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPNYDM 460 (608)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHHTSCHHHHHHCCSSCSSCCCCCC
T ss_pred HhHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhccccchhhHHHHHHHhcCCCCCceeeeecc
Confidence 9999999999999998 7889999999999999999999999999999999999888 9999999999999998765
Q ss_pred ----cEEEEEEEe
Q 002864 463 ----EKLELEQSQ 471 (872)
Q Consensus 463 ----~~i~l~Q~r 471 (872)
+.+.++|++
T Consensus 461 ~~~~~~~~l~q~~ 473 (608)
T 3u9w_A 461 TLTNACIALSQRW 473 (608)
T ss_dssp TTTHHHHHHHHHH
T ss_pred ccccceeeHHhHH
Confidence 245666744
No 10
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=4.9e-77 Score=700.11 Aligned_cols=548 Identities=18% Similarity=0.277 Sum_probs=414.8
Q ss_pred CCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECC----CCEEEEEecCceeeEEEEEeccCCCCccccCeeEEE
Q 002864 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD----TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVEL 81 (872)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~----~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~ 81 (872)
..+|+|..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|.+|.+++. +..+..
T Consensus 20 ~~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l~I~~v~v~g~---------~~~~~~ 90 (632)
T 2xq0_A 20 STLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGS---------KADFQI 90 (632)
T ss_dssp TCCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSEEEEEEEETTE---------ECCEEE
T ss_pred ccccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCCEEEEEEECCe---------ecceEE
Confidence 3479999999999999999999999999999999999877 799999999999999998541 223333
Q ss_pred ec----CCeEEEEEeCCCcCCceEEEEEEEEeeecCCCcceEEeee-ccCCeeecccccCCCcccccccccccCCCCce-
Q 002864 82 VE----ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACK- 155 (872)
Q Consensus 82 ~~----~~~~l~i~l~~~L~~g~~~L~i~y~g~~~~~~~G~~~~~y-~~~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~k- 155 (872)
+. .++.++|.++++ .+.++|+|.|+|.++.. |++.... ..+|. +++++|||||.+||+||||||+|+.|
T Consensus 91 ~~~~~~~~~~l~I~l~~~--g~~~~l~I~Y~g~~~~~--gl~~~~~~~~~g~-~~~~~Tq~ep~~AR~~fPc~D~P~~Ka 165 (632)
T 2xq0_A 91 EQRKEPLGSRLVINNASC--NDNFTLNIQFRTTDKCT--ALQWLNSKQTKGG-KPYVFSQLEAIHARSLFPCFDTPSVKS 165 (632)
T ss_dssp CCCBTTTBCCEEEECCCS--SSEEEEEEEEEECTTCS--SEEEECTTTSTTS-SCEEEECCTTTTGGGTSCBCCSTTCCE
T ss_pred cccccccCcEEEEEecCC--CCEEEEEEEEeeecCcC--cceeecccccCCC-ceEEEeccccCCcceeeeecCCcccce
Confidence 32 357899998876 23999999999997654 4433222 22455 78889999999999999999999999
Q ss_pred ---EEEEecCCCeeeecCcccceeecCCeEEEEEecCCCccceeeEEEEeeeeEeeccccCCeEEEEEEcCCchhhHHHH
Q 002864 156 ---ITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFA 232 (872)
Q Consensus 156 ---l~i~~p~~~~~~sng~~~~~~~~~~~~~~~f~~t~~~~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~ 232 (872)
++|++| +.|++||........++ .+++|+.++|||+|++||+||+|...+. |+++++|++|+..+.++++
T Consensus 166 tf~i~I~~p--~~vv~sg~~~~~~~~~~-~~~~F~~t~pmstYLva~~vg~f~~~~~----g~~~~v~~~p~~~~~~~~~ 238 (632)
T 2xq0_A 166 TFTASIESP--LPVVFSGIRIEDTSKDT-NIYRFEQKVPIPAYLIGIASGDLSSAPI----GPRSTVYTEPFRLKDCQWE 238 (632)
T ss_dssp EEEEEEECS--SCEEESSEECCCC-----CEEEEEEEEEECGGGCCEEESSCEEEEE----ETTEEEEECHHHHHHHHHH
T ss_pred EEEEEEEEc--hHHhccCccccceecCC-CeEEEEeCCccchhheeeeEecceeecc----CCeeEEEEccchHHHHHHH
Confidence 999999 99987775443322122 2789999999999999999999998762 5679999999988888999
Q ss_pred HH-HHHHHHHHHHHHhCCCCCCCCcceeec-CCCCCcccccccccccccccccccCCCChHHHHHHHHHHHHHHHHHHHh
Q 002864 233 LN-VAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWF 310 (872)
Q Consensus 233 l~-~~~~~l~~~e~~~g~~yP~~kld~v~~-p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWf 310 (872)
++ .+.+++++|+++|| |||++|+++|++ |+|+.|||||||++ |.+..++.++. ....+||||+|||||
T Consensus 239 ~~~~~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn~glt-~~~~~ll~~~~--------~~~~viaHElAHqWf 308 (632)
T 2xq0_A 239 FENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESPNMT-FATPTLLAHDR--------SNIDVIAHELAHSWS 308 (632)
T ss_dssp HTTTHHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECCTTCE-EECGGGCCSSS--------CSTHHHHHHHHHTTB
T ss_pred HHHHHHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccccceEE-EeeceeccCch--------hHHHHHHHHHHHHHh
Confidence 98 99999999999999 999999999999 59999999999985 55554665543 145799999999999
Q ss_pred cCccccCccchhhhhhHHHHHHHHHHHhhhCcchhh--HHHHHHHHH-HhhhccccCCCCc---eeeecCCchhhhhccc
Q 002864 311 GNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGLAESHP---IEVEVNHTGEIDEIFD 384 (872)
Q Consensus 311 Gn~vt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~~~~~p---~~~~~~~~~~~~~~f~ 384 (872)
||+||++||+|+|||||||+|++++++++.+|++.. ...+..+.+ .. +|.+..++| +...+.++.+++..|+
T Consensus 309 GnlVT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~--l~~~~~~~pl~~l~~~~~~~~~~~~~f~ 386 (632)
T 2xq0_A 309 GNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNS--IDSMKDPERFSTLVQNLNDNTDPDDAFS 386 (632)
T ss_dssp TTTEEESSGGGTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--HHTCSSHHHHTSSSCCCCSSSCGGGGCS
T ss_pred cCCCccCCcchhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHhcccCCCCcccccCCCCCCChHHhcc
Confidence 999999999999999999999999999999998642 211111111 12 245555677 3333333455677899
Q ss_pred ceeechhhHHHHHHHHhhCH-HHHHHHHHHHHHHhccCCCChHHHHHHHHhccC---CcHHH-HHHHhhcCCCcceEEEE
Q 002864 385 AISYRKGASVIRMLQNYLGA-ECFQRSLASYIKKYACSNAKTEDLWAALEEGSG---EPVNK-LMNSWTKQKGYPVISVK 459 (872)
Q Consensus 385 ~i~Y~Kga~vl~mL~~~lG~-~~F~~~lr~yl~~~~~~~~~~~df~~~l~~~~~---~~l~~-~~~~W~~~~g~P~l~v~ 459 (872)
.++|.||++||+||+..||+ +.|+++||.|+++|++++++++|||+++++++| .+++. +|++|++++|+|+ .++
T Consensus 387 ~i~Y~KGa~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~G~P~-~~~ 465 (632)
T 2xq0_A 387 TVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPP-RPH 465 (632)
T ss_dssp SHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCCSCCC-CCC
T ss_pred chhhHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhhhccccccHHHHHHHhcCCCCCC-CcC
Confidence 99999999999999999999 999999999999999999999999999999987 46776 7999999999999 765
Q ss_pred EeCcE----EEEEEEeeccCCCCCCCeeEEEEEEEECcccceeeEEeeccceEE--EecccccccccCCCCCCceEEecC
Q 002864 460 VKEEK----LELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSF--DIKELLGCSISKEGDNGGWIKLNV 533 (872)
Q Consensus 460 ~~~~~----i~l~Q~rf~~~~~~~~~~w~iPi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~wi~~N~ 533 (872)
.+.+. ..+.| | |...++ .... ..++ .++ .. + .
T Consensus 466 ~~~~~~~~~~~l~~-~-----------w~~~~~---~~~~----------~~~~~~~~~----------~~--d-----~ 503 (632)
T 2xq0_A 466 FITALADNVYQLAD-K-----------WVEMAQ---HLKT----------TEDFRSEFN----------AI--D-----I 503 (632)
T ss_dssp CCCHHHHHHHHHHH-H-----------HHHHTT---TCCS----------HHHHHHHCC----------GG--G-----G
T ss_pred CCchHHHHHHHHHH-H-----------HHhccc---cccc----------ccccccCCC----------HH--H-----H
Confidence 44310 01111 1 211000 0000 0000 011 01 1 1
Q ss_pred CceeEEEEEcCHHHHHHHHHHHHcC------------CCChhhHHHHHHHHHH--HHHcCCCCHHHHHHHHHhccCCCcH
Q 002864 534 NQTGFYRVKYDKDLAARLGYAIEMK------------QLSETDRFGILDDHFA--LCMARQQTLTSLLTLMASYSEETEY 599 (872)
Q Consensus 534 ~~~gyyRV~Yd~~~w~~l~~~l~~~------------~i~~~~ra~li~D~~~--la~~g~l~~~~~l~l~~~l~~e~~~ 599 (872)
. +|+...|..+.+.|..+ .++ .+|+++|+|+|+ |+.++ +.++.++.++++.++...
T Consensus 504 ~-------~~~~~~~~~fl~~l~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~~~--n~ei~~~~~~~~~~~~~~ 573 (632)
T 2xq0_A 504 K-------DFNSNQLVLFLETLTQNGHSNKKPKDFDWAKF-PVASRALLDIYQDNIVKSQ--NAEVVFKMFKFQIFAKLQ 573 (632)
T ss_dssp T-------TCCHHHHHHHHHHHHTTCSSTTSCSCCCGGGC-HHHHHHHHHHTCCCCCTCC--CHHHHHHHHHHHHHTTCG
T ss_pred h-------hCCHHHHHHHHHHHHhcccccccccccCCCCC-HHHHHHHHHHHhhhhccCc--CHHHHHHHHHHHHhcCCh
Confidence 1 77899999999998742 466 889999999998 65555 448899999999889999
Q ss_pred HHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHh
Q 002864 600 TVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEK 641 (872)
Q Consensus 600 ~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 641 (872)
.+|..+...|..+.++.... | .|..|.++.+.+....|++
T Consensus 574 ~~~~~~~~~l~~~gr~k~~~-p-~y~~l~~~~~~~a~~~f~~ 613 (632)
T 2xq0_A 574 EEYKHLADWLGTVGRMKFVR-P-GYRLLNSVDRRLALATFDK 613 (632)
T ss_dssp GGHHHHHHHTTTCCCHHHHH-H-HHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCeeEeh-h-hHHHHHhhhHHHHHHHHHH
Confidence 99999887776654432221 2 3444443333444444443
No 11
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-72 Score=633.67 Aligned_cols=398 Identities=22% Similarity=0.381 Sum_probs=356.9
Q ss_pred CcceEEEEEeCcEEEEEEEeeccCCCC---CCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCCCce
Q 002864 452 GYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGW 528 (872)
Q Consensus 452 g~P~l~v~~~~~~i~l~Q~rf~~~~~~---~~~~w~iPi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 528 (872)
|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+||..++.++.++. .+ +|
T Consensus 1 GyPvvtV~~~~~~~~l~Q~RFl~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~l~~---------~~--~w 69 (419)
T 3rjo_A 1 GFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV--EW 69 (419)
T ss_dssp CEEEEEEEEETTEEEEEEEEEC----------CCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC--SC
T ss_pred CCCEEEEEECCCEEEEEEeeccCCCCCCCCCCeEEEEEEEEEeCCCCccceEEEecCceEEEcCC---------CC--ce
Confidence 899999999889999999999987643 23589999999987655445678887776776642 34 89
Q ss_pred EEecCCceeEEEEEcCHHHHHHHHHHHHc--CCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHH
Q 002864 529 IKLNVNQTGFYRVKYDKDLAARLGYAIEM--KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLI 606 (872)
Q Consensus 529 i~~N~~~~gyyRV~Yd~~~w~~l~~~l~~--~~i~~~~ra~li~D~~~la~~g~l~~~~~l~l~~~l~~e~~~~~w~~~~ 606 (872)
|++|++++||||||||+++|.+|+++|.. ..||+.||+|||+|+|+||++|.++|+.+|+|++||++|++|+||.+++
T Consensus 70 i~~N~~~~GyYRVnYd~~~w~~L~~~L~~~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~y~~w~~~~ 149 (419)
T 3rjo_A 70 IKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGL 149 (419)
T ss_dssp EEEEESSSSCCEEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCSHHHHHHHH
T ss_pred EEEeCCccceEEEEeCHHHHHHHHHHHhhCCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 99999999999999999999999999975 3899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhh
Q 002864 607 TISYKIGRIAADAR-PELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFL 685 (872)
Q Consensus 607 ~~l~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~g~~~c~~~A~~~f~~~~ 685 (872)
..|.+|..++...+ ++.++.|++|+++++.++++++||+. ++++.++.+|..++.+||.+|+++|+++|.++|++|+
T Consensus 150 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lgw~~--~~~~~~~~lR~~~l~~ac~~g~~~c~~~A~~~f~~~~ 227 (419)
T 3rjo_A 150 NELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWK 227 (419)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHcCCCC--CchHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 99999999986432 56789999999999999999999984 5889999999999999999999999999999999999
Q ss_pred cCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhcCc-CCcc
Q 002864 686 ADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSE-VRSQ 764 (872)
Q Consensus 686 ~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~il~aL~c~~d~~~l~~~L~~~l~~~-i~~q 764 (872)
+++..+.||||+|.+|||++++ ++++|++||++|+++++++||..+|.||||++|+++++++|+++++++ ||+|
T Consensus 228 ~~~~~~~i~~dlr~~Vy~~~~~-----~~~~~~~l~~~y~~s~~~~ek~~ll~aL~~s~d~~ll~~~L~~~l~~~~ir~q 302 (419)
T 3rjo_A 228 ESNGNLSLPVDVTLAVFAVGAQ-----STEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQ 302 (419)
T ss_dssp HTTTCSCCCGGGHHHHHHHHTT-----SHHHHHHHHHHHHHCCCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTSSSCGG
T ss_pred hCCCCCCCCCCcceeEEeeeeC-----CHHHHHHHHHHHhcCCCHHHHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCchh
Confidence 8754447999999999987653 388999999999999999999999999999999999999999999886 6999
Q ss_pred cceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCCch-HHHHHHH
Q 002864 765 DAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKPY-IARTLRQ 839 (872)
Q Consensus 765 d~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~~-~~~~~~~ 839 (872)
|...++. ++.| |++++|+|+++||+.|.++|+.+ +.++++|..+++.|+|+++++++++||+.++..+ ..+++++
T Consensus 303 D~~~~~~~v~~n~~g~~~aw~fl~~nw~~l~~~~~~~~~~~~~~i~~~~~~~~t~~~l~e~~~Ff~~~~~~~~~~~~~~q 382 (419)
T 3rjo_A 303 EFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKENGSQLRCVQQ 382 (419)
T ss_dssp GHHHHHHHHHTSTTTHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHTTTTCCSHHHHHHHHHHHHTTTTC-CCCHHHHH
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhCcCchhHHHHHHHHhhcCCCHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 9999998 8777 99999999999999999999854 7899999999999999999999999999887654 6789999
Q ss_pred HHHHHHHHHHHHHHhcChhHHHHHHHHhhc
Q 002864 840 SIERVQINAKWVESIRNEGHLAEAVKELAY 869 (872)
Q Consensus 840 ~le~i~~ni~W~~~~~~~~~i~~wl~~~~~ 869 (872)
++|+|+.|++|++++.+. |.+||+++.+
T Consensus 383 ale~i~~ni~W~~~~~~~--v~~wL~~~~~ 410 (419)
T 3rjo_A 383 TIETIEENIGWMDKNFDK--IRVWLQSEKL 410 (419)
T ss_dssp HHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHhhH
Confidence 999999999999999999 9999998754
No 12
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.95 E-value=1.7e-27 Score=275.11 Aligned_cols=292 Identities=14% Similarity=0.162 Sum_probs=198.6
Q ss_pred eEEEEecCC---CeeeecCcccceeecCCeEEEEEecCC---CccceeeEEEEeeeeEeeccccCCeEEEEEEcCCchhh
Q 002864 155 KITLDVPSE---LVALSNMPVIDEKVDGNMKTVSYQESP---IMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQ 228 (872)
Q Consensus 155 kl~i~~p~~---~~~~sng~~~~~~~~~~~~~~~f~~t~---~~~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~ 228 (872)
+++|..|++ |.+.+..+....... +.. +|.... .+. --+.+|+|...+- +..|+++++.........
T Consensus 124 ~~~i~~P~~~~~W~vaT~L~~~~~~~~-~~~--~f~a~~yd~LvD---sPv~~G~~~~~~~-~~~g~p~~l~v~~~~~~d 196 (597)
T 4fgm_A 124 ELHLHAPPEAPLWKVATGMPRKSGQPH-SWG--CFRADNYDALID---YPFLIGDLTIEEF-IAHGIKHSLVLSGRHYAD 196 (597)
T ss_dssp EEEECCCTTCTTCEEEESSCBCSSCTT-SSE--EEEESSHHHHTT---CCEEEESCEEEEE-EETTEEEEEEEESSCCCC
T ss_pred EEEEECCCCCCcceEEecCCccCCCCC-cce--EEEcCCHHHHhc---chhcccCcEEEEe-ccCCeEEEEEEEcCCCCC
Confidence 489999999 999888876543211 222 233211 111 1246889987663 456888887555444445
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcceeec-CCCCCcccccccccc--cccccccccCCCChHHHHHHHHHHHHHHH
Q 002864 229 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVT--YRETALLYDDQHSAAANKQRVATVVAHEL 305 (872)
Q Consensus 229 ~~~~l~~~~~~l~~~e~~~g~~yP~~kld~v~~-p~~~~gamE~~gli~--~~e~~ll~~~~~~~~~~~~~~~~~iaHEl 305 (872)
.+..+..+.+++++++++|| |||+++++++.. ++...|||||.+..+ +++..+.......+.........+++||+
T Consensus 197 ~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~~~~~~~~~~~~~liaHE~ 275 (597)
T 4fgm_A 197 TSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQYEMNDNYQTFLSLCCHEY 275 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTCCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhccccccccchhhhhchhhhHhhhh
Confidence 68888999999999999999 999999999864 345789999998644 55543322222123345567789999999
Q ss_pred HHHHhcCcccc-----------CccchhhhhhHHHHHHHHHHHhhhC--cchhhHHHHHHHHHHhhhccccCCCCceeee
Q 002864 306 AHQWFGNLVTM-----------EWWTHLWLNEGFATWVSYLAADSLF--PEWKIWTQFLDECTEGLRLDGLAESHPIEVE 372 (872)
Q Consensus 306 aHqWfGn~vt~-----------~~w~d~WL~EGfa~y~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 372 (872)
+|||||+.|+| ++|+++||+||||+|++.++..+.. ...... ..+......+........+|+...
T Consensus 276 ~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r~G~~~~~~~~-~~l~~~i~~~~~~~gr~~~sl~~s 354 (597)
T 4fgm_A 276 FHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHTSGIIDEKRYL-KLLGDTLSRVERGAGQYQQSVTES 354 (597)
T ss_dssp HHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHHTTSSCHHHHH-HHHHHHHHHHHHSGGGGTCCHHHH
T ss_pred heeecccccccccccccccccccccccchhhhhHHHHHHHHHHHHcCCCCHHHHH-HHHHHHHHHhhcCCCccccChHHc
Confidence 99999988865 4569999999999999998776542 111111 111222222221111222232211
Q ss_pred c-------CCchhhhhcccceeechhhHHHHHHHHhhCH-----HHHHHHHHHHHHHhcc--CCCChHHHHHHHHhccCC
Q 002864 373 V-------NHTGEIDEIFDAISYRKGASVIRMLQNYLGA-----ECFQRSLASYIKKYAC--SNAKTEDLWAALEEGSGE 438 (872)
Q Consensus 373 ~-------~~~~~~~~~f~~i~Y~Kga~vl~mL~~~lG~-----~~F~~~lr~yl~~~~~--~~~~~~df~~~l~~~~~~ 438 (872)
. ..+++....+....|.||++|++||+..|++ +.|+++||.|+++|.. ++++++||.+++++++|.
T Consensus 355 s~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~~~~~t~~d~~~~~e~~sG~ 434 (597)
T 4fgm_A 355 SFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKTSIGTADDTVINWLNQYPGI 434 (597)
T ss_dssp HHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTTTCCBCTTHHHHHHHTSTTC
T ss_pred CchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHhcCc
Confidence 0 0001111122234699999999999888865 4899999999999874 689999999999999999
Q ss_pred cHHHHHHHhhcCCCcce
Q 002864 439 PVNKLMNSWTKQKGYPV 455 (872)
Q Consensus 439 ~l~~~~~~W~~~~g~P~ 455 (872)
++.+||++|+++++.|.
T Consensus 435 dl~~ff~~~l~~t~~~p 451 (597)
T 4fgm_A 435 DISDFLKDALYNKESLS 451 (597)
T ss_dssp CCHHHHHHHHHSCSCCC
T ss_pred CHHHHHHHHHhCCCCcc
Confidence 99999999999998754
No 13
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=81.77 E-value=50 Score=33.86 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCCcccccccccccccccccccCCCChHHHHHHHHHHHHHHHHHH
Q 002864 229 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQ 308 (872)
Q Consensus 229 ~~~~l~~~~~~l~~~e~~~g~~yP~~kld~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHq 308 (872)
+..+.-.+.++.+||.+.|| .-+++ ..++..-.+.. ..+| ..+..+.+.+......... ..-..+++||++|-
T Consensus 73 ~~DAhy~a~~~~d~y~~~~g-r~~id-~~l~~~Vhyg~-~y~N---AfWdG~~M~fGDG~~~~~p-~~~lDVv~HE~tHG 145 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFG-TSPLT-HKLYMKVHYGR-SVEN---AYWDGTAMLFGDGATMFYP-LVSLDVAAHEVSHG 145 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEESCTT-TCCC---EEECSSCEEECCCCSSBSC-SCCHHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcC-CCCCC-CceEEEEecCC-CccC---cEecCcEEEeeCCCccccc-ccccceeeeccccc
Confidence 45566678899999999999 66766 24443322211 1222 1111112233221100000 01257899999998
Q ss_pred HhcCccccCccchhh-hhhHHHHHHHHHHH
Q 002864 309 WFGNLVTMEWWTHLW-LNEGFATWVSYLAA 337 (872)
Q Consensus 309 WfGn~vt~~~w~d~W-L~EGfa~y~~~~~~ 337 (872)
-.-....+....+.- |||||+..+...+-
T Consensus 146 Vt~~~agL~y~~eSGaLnEs~SDifG~~ve 175 (301)
T 1u4g_A 146 FTEQNSGLIYRGQSGGMNEAFSDMAGEAAE 175 (301)
T ss_dssp HHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeccccCccccCCccchhHHHHHHHHHHHH
Confidence 877765555444433 89999999986643
No 14
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=81.42 E-value=1.8 Score=50.52 Aligned_cols=107 Identities=16% Similarity=0.196 Sum_probs=56.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCC------CCcceeecCCCC---C-----c-cccccccccccccc-ccccCCCCh
Q 002864 227 NQGKFALNVAVKTLELYKEYFAVPYSL------PKLDMIAIPDFA---A-----G-AMENYGLVTYRETA-LLYDDQHSA 290 (872)
Q Consensus 227 ~~~~~~l~~~~~~l~~~e~~~g~~yP~------~kld~v~~p~~~---~-----g-amE~~gli~~~e~~-ll~~~~~~~ 290 (872)
++++.+...+...=..|...+|...|. .++++|+..+-. . | .-.|-|+-+-+... +-+... .
T Consensus 338 ~~~~~~~~a~k~~e~~Fh~vl~t~~p~~~~~~~~~L~Vvvf~s~~dY~~~~~lfg~~TdNGG~YleG~~~f~aYe~~--~ 415 (785)
T 2y3u_A 338 EKIKRLYWASREVKSQFHRVVGNDKALEVGNADDVLTMKIFNSPEEYKFNTNINGVSTDNGGLYIEPRGTFYTYERT--P 415 (785)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCSCSSSSCGGGSEEEEEESSHHHHTHHHHHHCCCCSSSCEEEGGGTEEEEECCC--T
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCeEEEEEECCHHHHhhcccccCCcCCCceEEEeCCceEEEEecc--C
Confidence 445555555555556678888866664 367777764321 0 0 11122211111110 111110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccccCccc---------hhhhhhHHHHHHHHH
Q 002864 291 AANKQRVATVVAHELAHQWFGNLVTMEWWT---------HLWLNEGFATWVSYL 335 (872)
Q Consensus 291 ~~~~~~~~~~iaHElaHqWfGn~vt~~~w~---------d~WL~EGfa~y~~~~ 335 (872)
......+..++.||++|.-=|...-+..|. -.|+.||||+|++..
T Consensus 416 ~~si~nLee~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~~ 469 (785)
T 2y3u_A 416 QQSIFSLEELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGS 469 (785)
T ss_dssp TTCSSCHHHHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTTB
T ss_pred ccceEeecccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhcC
Confidence 001112345789999999866444444443 579999999999754
No 15
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=80.33 E-value=4 Score=42.02 Aligned_cols=107 Identities=23% Similarity=0.336 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeecCCCCC-cccccccccccccccccccCCCChH-HHHHHHHHHHHHH
Q 002864 229 GKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAA-GAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHE 304 (872)
Q Consensus 229 ~~~~l~~~~~~l~~~e~~~g~~yP~~k--ld~v~~p~~~~-gamE~~gli~~~e~~ll~~~~~~~~-~~~~~~~~~iaHE 304 (872)
+-.+...+.++.+||.+.|| .-+++- +.++..-.+.. ++-.+..-.++..+.+.+....... .....-..+++||
T Consensus 67 avdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~Vhyg~~~~~~~y~NAfWdg~~m~fGdGdg~~f~~~~~~lDVv~HE 145 (301)
T 1bqb_A 67 GVDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNNAAWIGDKMIYGDGDGRTFTNLSGANDVVAHE 145 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTCEEECSSSEEECCCCSSSBSCGGGCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEEeCCCCCCCCccCcEEcCCEEEEEcCCCcccCCcccccceeeee
Confidence 34566678899999999999 566653 33333211110 0000111112222233333321000 0000124689999
Q ss_pred HHHHHhcCccccCccchh-hhhhHHHHHHHHHH
Q 002864 305 LAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLA 336 (872)
Q Consensus 305 laHqWfGn~vt~~~w~d~-WL~EGfa~y~~~~~ 336 (872)
++|--.-....+..-.+. =|||||+.++....
T Consensus 146 ~tHGVt~~~agl~y~~eSGaLnEs~SDifg~~~ 178 (301)
T 1bqb_A 146 ITHGVTQQTANLEYKDQSGALNESFSDVFGYFV 178 (301)
T ss_dssp HHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred cccceecccCCCcccCCcCchhHHHHHHHhHhh
Confidence 999776555444433333 38999999999753
No 16
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=74.26 E-value=5.3 Score=41.24 Aligned_cols=102 Identities=19% Similarity=0.118 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeecCCCC---Cccccccccccccccc-ccccCCCChHHHHHHHHHHH
Q 002864 228 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFA---AGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 301 (872)
Q Consensus 228 ~~~~~l~~~~~~l~~~e~~~g~~yP~~k--ld~v~~p~~~---~gamE~~gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 301 (872)
.+..|...+.++.+||.+.|| .-+++. +.++..-.+. ..|.-+...++|.+-. ..+.+- .....++
T Consensus 69 aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~-------~~slDVv 140 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPL-------SGGIDVV 140 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCTTTCCCEEECSSCEEECCCCSSSBSCG-------GGCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecCCCccCceEcCCEEEEeCCCCcccccc-------cccccce
Confidence 346677788999999999999 566642 3333321111 1233233334443321 111111 0124789
Q ss_pred HHHHHHHHhcCccccCccch-hhhhhHHHHHHHHHHH
Q 002864 302 AHELAHQWFGNLVTMEWWTH-LWLNEGFATWVSYLAA 337 (872)
Q Consensus 302 aHElaHqWfGn~vt~~~w~d-~WL~EGfa~y~~~~~~ 337 (872)
+||+.|--.........-.+ -=|||+|+..+...+-
T Consensus 141 ~HE~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve 177 (316)
T 3dnz_A 141 AHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVE 177 (316)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccCCCcccCCccchhHHHHHHHHHHHH
Confidence 99999977655443333333 2489999999986654
No 17
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=72.30 E-value=20 Score=36.72 Aligned_cols=102 Identities=25% Similarity=0.224 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeec---CCCCCccccccccccccccc-ccccCCCChHHHHHHHHHHH
Q 002864 228 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAI---PDFAAGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 301 (872)
Q Consensus 228 ~~~~~l~~~~~~l~~~e~~~g~~yP~~k--ld~v~~---p~~~~gamE~~gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 301 (872)
.+..|...+.++.+||.+.|| .-+++. +.++.. ..-...|.-+...++|.+-. ..+.+- .....++
T Consensus 62 aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~-------~~slDVv 133 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRYNNAFWNGSQMTYGDGDGSTFIAF-------SGDPDVV 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSCCCEEECSSCEEEECCCSSSBCCG-------GGSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCccCceecCCEEEEeCCCCcccccc-------ccccchh
Confidence 455677788999999999999 566642 333322 11112233333334444321 111111 0124789
Q ss_pred HHHHHHHHhcCccccCccch-hhhhhHHHHHHHHHHH
Q 002864 302 AHELAHQWFGNLVTMEWWTH-LWLNEGFATWVSYLAA 337 (872)
Q Consensus 302 aHElaHqWfGn~vt~~~w~d-~WL~EGfa~y~~~~~~ 337 (872)
+||++|--.-.......-.+ -=|||+|+..+...+-
T Consensus 134 aHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve 170 (304)
T 4ger_A 134 GHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ 170 (304)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccccccCCccccCCccchhHHHHHHHHHHhc
Confidence 99999976654433333222 2389999999997765
No 18
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=71.32 E-value=3.1 Score=35.73 Aligned_cols=67 Identities=19% Similarity=0.255 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCcceeecCCCCCcccccc-----cccccccccccccCCCChHHHHHHHHHHHHHHHHHHH
Q 002864 235 VAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENY-----GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 309 (872)
Q Consensus 235 ~~~~~l~~~e~~~g~~yP~~kld~v~~p~~~~gamE~~-----gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 309 (872)
...++++-+.+..|++. +++-++ ++....|+-.. +.|.+... ++- . -....+..++|||++|-=
T Consensus 27 ~L~~~~~~l~~~~~~~~--~~v~v~--~~~~~NAf~~g~~~~~~~i~v~~g-Ll~-~-----l~~~El~aVlaHElgH~~ 95 (107)
T 3cqb_A 27 WLLETVGRQAQQAGIGM--PTVAIY--DSADINAFATGAKRDDSLVAVSTG-LLH-N-----MTRDEAEAVLAHEVSHIA 95 (107)
T ss_dssp HHHHHHHHHHHHHTCCC--CEEEEE--CCSSEEEEEECCC--CCEEEEEHH-HHH-H-----SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC--CeEEEE--ECCCcCEEEEecCCCCCEEEEcHH-HHh-h-----CCHHHHHHHHHHHHHHHH
Confidence 34455666667778653 344443 33222222221 23444332 221 1 133568999999999975
Q ss_pred hcC
Q 002864 310 FGN 312 (872)
Q Consensus 310 fGn 312 (872)
-++
T Consensus 96 ~~h 98 (107)
T 3cqb_A 96 NGD 98 (107)
T ss_dssp TTC
T ss_pred CCC
Confidence 554
No 19
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=70.44 E-value=28 Score=36.36 Aligned_cols=105 Identities=17% Similarity=0.209 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeecCCCCCcccccccccccccccccccCCCChH-HHHHHHHHHHHHH
Q 002864 228 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHE 304 (872)
Q Consensus 228 ~~~~~l~~~~~~l~~~e~~~g~~yP~~k--ld~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~-~~~~~~~~~iaHE 304 (872)
.+..+...+.++.+||.+.|| .-+++. ..++..-.+. ...+| .++..+.+.+....... .....-..+++||
T Consensus 89 av~~ay~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg-~~y~N---AfWdG~~M~fGDG~g~~f~~~~~~lDVv~HE 163 (341)
T 2vqx_A 89 AVDEAYDYLGVTYDFFWQAFK-RNSLDNQGLPLTGSVHYG-KEYQN---AFWNGQQMVFGDGDGEIFNRFTIAIDVVGHA 163 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEESCS-SSCCC---EEECSSCEEECCCCSSSBCCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEecC-CCccC---ceecCcEeEeeCCCCcccCCcccchhhhhhh
Confidence 355566778899999999999 445542 3333321111 01111 11122223332221000 0000124689999
Q ss_pred HHHHHhcCccccCccchh-hhhhHHHHHHHHHHH
Q 002864 305 LAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 337 (872)
Q Consensus 305 laHqWfGn~vt~~~w~d~-WL~EGfa~y~~~~~~ 337 (872)
++|--.........-.+. =|||||+.++...+-
T Consensus 164 ltHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve 197 (341)
T 2vqx_A 164 LAHGVTESEAGLIYFQQAGALNESLSDVFGSLVK 197 (341)
T ss_dssp HHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceecccCCccccCCCcchhhHHHHHHHHHHH
Confidence 999776655444433333 389999999987654
No 20
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=65.45 E-value=46 Score=34.07 Aligned_cols=98 Identities=15% Similarity=0.139 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCC---CCcccccccccccccccccccCCCChHHHHHHHHHHHHHHH
Q 002864 229 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDF---AAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHEL 305 (872)
Q Consensus 229 ~~~~l~~~~~~l~~~e~~~g~~yP~~kld~v~~p~~---~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEl 305 (872)
+..|.-.+.++.+||.++|| .-|+. ..++..-.+ ...|.=+...++|.+-.-.+.+. .-..+++||+
T Consensus 74 ~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NAfWdg~~m~fGDG~~~~~~~--------~slDVv~HE~ 143 (306)
T 3nqx_A 74 LNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFYPL--------VSLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCEEECSSCEEEECCCSSBSCS--------CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCccccCCEEEEeCCCcccccc--------cccchhhhhh
Confidence 45566678899999999999 56665 333332111 11232223334444322111111 1247899999
Q ss_pred HHHHhcCccccCcc-chhhhhhHHHHHHHHHH
Q 002864 306 AHQWFGNLVTMEWW-THLWLNEGFATWVSYLA 336 (872)
Q Consensus 306 aHqWfGn~vt~~~w-~d~WL~EGfa~y~~~~~ 336 (872)
.|--......+..- ..-=|||||+..+...+
T Consensus 144 tHGvt~~~a~l~y~~esGaLnEs~SDifg~~v 175 (306)
T 3nqx_A 144 SHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAA 175 (306)
T ss_dssp HHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCccCCCCCcccchHHHHHHHHH
Confidence 99776544333222 22348999999998664
No 21
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=62.06 E-value=27 Score=43.09 Aligned_cols=190 Identities=15% Similarity=0.134 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHcCCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHh-cc---CCCcHHHHHHHHHHHHHHHHHHhcc--
Q 002864 546 DLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMAS-YS---EETEYTVLSNLITISYKIGRIAADA-- 619 (872)
Q Consensus 546 ~~w~~l~~~l~~~~i~~~~ra~li~D~~~la~~g~l~~~~~l~l~~~-l~---~e~~~~~w~~~~~~l~~l~~~~~~~-- 619 (872)
.....|.+.+..+.++..+.++++.-+.++. . +-...++.+.- +. ...+..+|.+++-++..|-+.+...
T Consensus 356 ~a~~~i~~~i~~~~l~~~ea~~~l~~~~~~~---~-Pt~e~l~~~~~l~~~~~~~~~~~l~~ta~La~gslV~k~c~~~~ 431 (1056)
T 1lsh_A 356 EALLFLKRTLASEQLTSAEATQIVASTLSNQ---Q-ATRESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTV 431 (1056)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHTC---C-CCHHHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhhccC---C-CCHHHHHHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHhccCC
Confidence 3556667777778898888777777544332 2 33334443332 22 2356788888888888776655322
Q ss_pred --ChhHHHHHHHHHHHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCC--CCCCCCc
Q 002864 620 --RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADR--TTPLLPP 695 (872)
Q Consensus 620 --~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~g~~~c~~~A~~~f~~~~~~~--~~~~i~~ 695 (872)
+++....+.+++. ...++ + + ..-+...|+.+...|+...+. .+..++.+. .....|.
T Consensus 432 ~c~~~~v~~i~~~l~----~~~~~-------~-~---~~~~~~~LkaLGN~g~p~~l~----~l~~~l~~~~~~~~~~~~ 492 (1056)
T 1lsh_A 432 SCPDELLQPLHDLLS----QSSDR-------A-K---EEEIVLALKALGNAGQPNSIK----KIQRFLPGQGKSLDEYST 492 (1056)
T ss_dssp SCCGGGTHHHHHHHH----HHHHT-------T-C---HHHHHHHHHHHHHHTCGGGHH----HHHTTSTTSSSCCCCSCH
T ss_pred CCCHHHHHHHHHHHH----HHHhc-------C-C---hHHHHHHHHHhhccCChhHHH----HHHHhhcCccccccccch
Confidence 1222222333322 22211 1 1 233456677777788765433 344444321 1122444
Q ss_pred chhhhhheeeeeecccCCHHHHHHHHHHHHcCCC-HHHHHHHHHHh-CCCCCHHHHHHHHHHhhc
Q 002864 696 DIRKAAYVAVMQKVSASDRSGYESLLRVYRETDL-SQEKTRILSSL-ASCPDVNIVLEVLNFLLS 758 (872)
Q Consensus 696 ~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~-~~ek~~il~aL-~c~~d~~~l~~~L~~~l~ 758 (872)
.+|....-++-.....-....-+.++..|.+... ++-|...+..| -|.++...++++.+.+..
T Consensus 493 rvr~aAi~ALr~~~~~~p~~v~~il~~i~~n~~e~~EvRiaA~~~Lm~t~P~~~~l~~ia~~l~~ 557 (1056)
T 1lsh_A 493 RVQAEAIMALRNIAKRDPRKVQEIVLPIFLNVAIKSELRIRSCIVFFESKPSVALVSMVAVRLRR 557 (1056)
T ss_dssp HHHHHHHHTTTTGGGTCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHCcCHHHHHHHHHHHhh
Confidence 5553222222111111112355667777765443 33444433333 356777777777666543
No 22
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=49.38 E-value=1.3e+02 Score=29.63 Aligned_cols=98 Identities=10% Similarity=0.123 Sum_probs=66.6
Q ss_pred ChhhHHHHHHHHHH-HHHc--C----CCCHHHHHHHHH-hccCCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHH-HHH
Q 002864 561 SETDRFGILDDHFA-LCMA--R----QQTLTSLLTLMA-SYSEETEYTVLSNLITISYKIGRIAADARPELLDYLK-QFF 631 (872)
Q Consensus 561 ~~~~ra~li~D~~~-la~~--g----~l~~~~~l~l~~-~l~~e~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~-~~~ 631 (872)
.-.+|..-+..+.. +... . ..+|..+++.+. .+.++.+..+-..++..+..|.+-+.. +.|. .|.
T Consensus 29 ~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~------~~f~~~y~ 102 (249)
T 2qk1_A 29 KWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKT------PGFSKDYV 102 (249)
T ss_dssp SHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCT------TTSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhccc------ccccHHHH
Confidence 35678888888777 6532 1 346777787554 455899999989999898887765531 2466 889
Q ss_pred HHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhc
Q 002864 632 ISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALL 668 (872)
Q Consensus 632 ~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~ 668 (872)
..++.+++++++= ........+...+..++...
T Consensus 103 ~~llp~ll~~l~d----kk~~V~~aa~~al~~i~~~~ 135 (249)
T 2qk1_A 103 SLVFTPLLDRTKE----KKPSVIEAIRKALLTICKYY 135 (249)
T ss_dssp HHHHHHHHHGGGC----CCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcC----CCHHHHHHHHHHHHHHHHHc
Confidence 9999999999971 12233445555666666556
No 23
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=38.00 E-value=28 Score=33.83 Aligned_cols=14 Identities=36% Similarity=0.584 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002864 296 RVATVVAHELAHQW 309 (872)
Q Consensus 296 ~~~~~iaHElaHqW 309 (872)
..+.++|||++|.+
T Consensus 135 ~~a~~~AHElGHnl 148 (214)
T 1r55_A 135 GAAATMAHEIGHSL 148 (214)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 35789999999986
No 24
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=37.86 E-value=31 Score=34.55 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 002864 294 KQRVATVVAHELAHQWFGN 312 (872)
Q Consensus 294 ~~~~~~~iaHElaHqWfGn 312 (872)
...++.+||||++|-=-++
T Consensus 97 ~~ELaaVLaHElgH~~~~H 115 (253)
T 3c37_A 97 ETELAGVLAHEINHAVARH 115 (253)
T ss_dssp HHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHCcC
Confidence 3568999999999975544
No 25
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=37.26 E-value=2e+02 Score=24.82 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=20.9
Q ss_pred EEEEEeCCCcCCceEEEEEEEEeeecC
Q 002864 87 ILVLEFAETLPTGMGVLAIGFEGVLND 113 (872)
Q Consensus 87 ~l~i~l~~~L~~g~~~L~i~y~g~~~~ 113 (872)
.+.+.++.++.||.|+|+..+.|+...
T Consensus 81 ~f~~~w~~~~~pG~Ytl~a~l~~~~~~ 107 (120)
T 3isy_A 81 DFSDVWKEVPEPGTYEVKVTFKGRAEN 107 (120)
T ss_dssp EEEEEESSCCCSEEEEEEEEECCEETT
T ss_pred EEEEEeCCCCCCccEEEEEEEEeeecc
Confidence 455667777889999999999887643
No 26
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=34.61 E-value=18 Score=32.12 Aligned_cols=45 Identities=18% Similarity=0.156 Sum_probs=25.3
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHHHHHHHHhcCccccCccch
Q 002864 274 LVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTH 321 (872)
Q Consensus 274 li~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~vt~~~w~d 321 (872)
+++|+...+-.-. +...-...+..++.||+||.+ |.+.+.+.|+|
T Consensus 68 I~lYR~pi~~~~~--~~eeL~~~V~~tvvHEiaHhf-e~lag~~glsd 112 (130)
T 2ejq_A 68 IALYYGSFLEVAG--EGFDWEAEVWETMLHELRHHL-ESLAGRDDLVQ 112 (130)
T ss_dssp EEEEHHHHHHHCC--TTCCHHHHHHHHHHHHHHHHH-HHHHTTC----
T ss_pred EEEehHHHHHHhC--ChhhHHHHHHHHHHHHhHHHH-HhhcccCCCCH
Confidence 5566665222222 223345568999999999985 55666655553
No 27
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=33.94 E-value=48 Score=31.77 Aligned_cols=13 Identities=54% Similarity=0.808 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHH
Q 002864 297 VATVVAHELAHQW 309 (872)
Q Consensus 297 ~~~~iaHElaHqW 309 (872)
.+.++|||++|+.
T Consensus 135 ~a~~~AHElGH~l 147 (202)
T 1yp1_A 135 MAVVMAHELGHNL 147 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 28
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=33.16 E-value=53 Score=31.31 Aligned_cols=14 Identities=50% Similarity=0.667 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002864 296 RVATVVAHELAHQW 309 (872)
Q Consensus 296 ~~~~~iaHElaHqW 309 (872)
..+.++|||++|++
T Consensus 132 ~~a~~~AHElGH~l 145 (197)
T 1bud_A 132 LVAITLAHEMAHNL 145 (197)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 36889999999996
No 29
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=32.89 E-value=56 Score=31.24 Aligned_cols=14 Identities=50% Similarity=0.674 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002864 296 RVATVVAHELAHQW 309 (872)
Q Consensus 296 ~~~~~iaHElaHqW 309 (872)
..+.++|||++|..
T Consensus 135 ~~a~~~AHElGH~l 148 (202)
T 2w15_A 135 WVAVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 36889999999995
No 30
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=30.62 E-value=60 Score=35.27 Aligned_cols=14 Identities=43% Similarity=0.620 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHH
Q 002864 296 RVATVVAHELAHQW 309 (872)
Q Consensus 296 ~~~~~iaHElaHqW 309 (872)
..+.++||||+|++
T Consensus 145 ~~a~t~AHElGHnl 158 (427)
T 2ero_A 145 LVAIAMAHEMGHNL 158 (427)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 46789999999997
No 31
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=26.00 E-value=49 Score=31.51 Aligned_cols=13 Identities=46% Similarity=0.721 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 002864 297 VATVVAHELAHQW 309 (872)
Q Consensus 297 ~~~~iaHElaHqW 309 (872)
.+.++|||++|++
T Consensus 135 ~a~~~AHElGH~l 147 (197)
T 1qua_A 135 MAVTMAHELGHNL 147 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 32
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=25.62 E-value=49 Score=31.68 Aligned_cols=14 Identities=36% Similarity=0.572 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 002864 296 RVATVVAHELAHQW 309 (872)
Q Consensus 296 ~~~~~iaHElaHqW 309 (872)
..+.++|||++|++
T Consensus 135 ~~a~~~AHElGHnl 148 (202)
T 1atl_A 135 LMGVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred eeEEEehhhhcccc
Confidence 36789999999995
No 33
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=25.54 E-value=2.1e+02 Score=23.77 Aligned_cols=21 Identities=10% Similarity=0.139 Sum_probs=15.7
Q ss_pred CeEEEEEeCCCcCCceEEEEEE
Q 002864 85 DEILVLEFAETLPTGMGVLAIG 106 (872)
Q Consensus 85 ~~~l~i~l~~~L~~g~~~L~i~ 106 (872)
...+.+.++ +|.+|.|+|.-+
T Consensus 64 ~~~~~~~l~-~L~~G~YtV~Wr 84 (102)
T 2c9r_A 64 KTMVITPAS-PLTAGTYKVDWR 84 (102)
T ss_dssp TEEEEEESS-CCCSEEEEEEEE
T ss_pred CcEEEEECC-CCCCceEEEEEE
Confidence 557778875 899999976543
No 34
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=22.97 E-value=2.4e+02 Score=23.60 Aligned_cols=21 Identities=14% Similarity=0.290 Sum_probs=15.8
Q ss_pred CeEEEEEeCCCcCCceEEEEEE
Q 002864 85 DEILVLEFAETLPTGMGVLAIG 106 (872)
Q Consensus 85 ~~~l~i~l~~~L~~g~~~L~i~ 106 (872)
...+.+.++ +|.+|.|+|.-+
T Consensus 66 ~~~~~~~l~-~L~~G~YtV~Wr 86 (104)
T 1lyq_A 66 KSMVIIPRE-PLPAGTYRVDWR 86 (104)
T ss_dssp TEEEEEESS-CCCSEEEEEEEE
T ss_pred CcEEEEECC-CCCCceEEEEEE
Confidence 457778876 899999976543
No 35
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=22.90 E-value=54 Score=31.45 Aligned_cols=14 Identities=43% Similarity=0.629 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002864 296 RVATVVAHELAHQW 309 (872)
Q Consensus 296 ~~~~~iaHElaHqW 309 (872)
..+.++|||++|.+
T Consensus 137 ~~a~~~AHElGH~l 150 (203)
T 1kuf_A 137 MVAVTMTHELGHNL 150 (203)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhhhhc
Confidence 36889999999995
No 36
>3iuk_A Uncharacterized protein; PF05960.1, DUF885, M32 carboxypeptidase-like fold, PSI, MCSG structural genomics, protein structure initiative; 1.85A {Arthrobacter aurescens}
Probab=22.24 E-value=1.3e+02 Score=33.85 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=31.9
Q ss_pred hCHHHHHHHHHHHHHH------hccCCCChHHHHHHHHhccCCcHHHHHHHhhcCCCcce
Q 002864 402 LGAECFQRSLASYIKK------YACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPV 455 (872)
Q Consensus 402 lG~~~F~~~lr~yl~~------~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~ 455 (872)
+.++.-..-+.+|+.. |..+.....++.+..++..|.+++.|-+.-+.....|+
T Consensus 495 ~~~~~a~~ev~Ry~~~Pgqa~sY~~G~~~i~~lR~~a~~~lGfdlk~FHd~vL~~G~~Pl 554 (562)
T 3iuk_A 495 ISEGQLQFEFTRYLGWPGQAPSYKVGQRLWEQIRAELESREGFDLKSFHSKALNIGSVGL 554 (562)
T ss_dssp CCHHHHHHHHHHHHHSTTSTTHHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHTTCSCCH
T ss_pred CChHHHHHHHHHHHcCCcHHhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCH
Confidence 3455555666677631 22222344566666677777888888666666655553
No 37
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=21.91 E-value=1e+02 Score=32.94 Aligned_cols=14 Identities=43% Similarity=0.688 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 002864 296 RVATVVAHELAHQW 309 (872)
Q Consensus 296 ~~~~~iaHElaHqW 309 (872)
..+.++||||+|..
T Consensus 138 ~~a~t~AHElGHnl 151 (397)
T 3k7n_A 138 LVASTITHELGHNL 151 (397)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHc
Confidence 46789999999984
No 38
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=21.47 E-value=50 Score=35.89 Aligned_cols=14 Identities=43% Similarity=0.783 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002864 296 RVATVVAHELAHQW 309 (872)
Q Consensus 296 ~~~~~iaHElaHqW 309 (872)
.++.++||||+|++
T Consensus 138 ~~a~t~AHElGHnl 151 (427)
T 2e3x_A 138 KTAVIMAHELSHNL 151 (427)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred eeeeehHHHHHHhh
Confidence 46789999999986
No 39
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=20.90 E-value=53 Score=28.29 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=22.8
Q ss_pred cccccccccccccCCCChHHHHHHHHHHHHHHHHHHH
Q 002864 273 GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 309 (872)
Q Consensus 273 gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 309 (872)
-+++|+....- --.+...-...+..++.||+||.+
T Consensus 68 rI~lYR~Pi~~--~~~~~~el~~~V~~vvvhEiahh~ 102 (114)
T 3e11_A 68 RIIIYRNTICA--LCETESEVIDEVRKTVVHEIAHHF 102 (114)
T ss_dssp EEEEEHHHHHH--TCSSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEehHHHHH--HhCChhHHHHHHHHHHHHHHHHHc
Confidence 36777766222 222344455678899999999985
Done!