Query 002866
Match_columns 872
No_of_seqs 275 out of 1675
Neff 4.7
Searched_HMMs 46136
Date Thu Mar 28 12:22:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002866.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002866hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2142 Molybdenum cofactor su 100.0 3.7E-96 8E-101 825.3 20.8 666 27-867 7-720 (728)
2 PLN02724 Molybdenum cofactor s 100.0 1.4E-62 2.9E-67 588.6 38.1 439 121-855 2-489 (805)
3 COG0520 csdA Selenocysteine ly 100.0 3.3E-56 7.1E-61 497.5 33.9 382 135-854 4-404 (405)
4 PRK09295 bifunctional cysteine 100.0 7.3E-43 1.6E-47 385.7 33.9 225 135-389 4-249 (406)
5 PF00266 Aminotran_5: Aminotra 100.0 7.9E-42 1.7E-46 372.3 26.2 212 151-390 1-225 (371)
6 COG1104 NifS Cysteine sulfinat 100.0 5.7E-41 1.2E-45 369.3 32.4 204 150-382 2-219 (386)
7 PLN02855 Bifunctional selenocy 100.0 1.4E-40 3.1E-45 369.7 34.7 223 138-389 16-258 (424)
8 TIGR03392 FeS_syn_CsdA cystein 100.0 7.3E-39 1.6E-43 352.2 34.5 225 135-389 2-242 (398)
9 PRK10874 cysteine sulfinate de 100.0 1.4E-38 3.1E-43 350.2 36.8 225 135-389 5-245 (401)
10 KOG1549 Cysteine desulfurase N 100.0 5.2E-39 1.1E-43 355.5 28.3 218 149-397 43-273 (428)
11 TIGR01979 sufS cysteine desulf 100.0 1.7E-37 3.8E-42 340.9 33.4 222 138-389 2-244 (403)
12 PLN02651 cysteine desulfurase 100.0 1.4E-37 3E-42 339.1 31.5 210 151-389 1-223 (364)
13 TIGR03402 FeS_nifS cysteine de 100.0 3.7E-36 8E-41 328.3 33.4 203 151-382 1-214 (379)
14 TIGR03403 nifS_epsilon cystein 100.0 2.4E-35 5.3E-40 322.6 34.3 203 151-382 1-218 (382)
15 TIGR01814 kynureninase kynuren 100.0 2.4E-34 5.2E-39 318.7 37.6 234 135-389 9-256 (406)
16 TIGR02006 IscS cysteine desulf 100.0 6.9E-34 1.5E-38 314.6 34.3 210 150-388 4-226 (402)
17 TIGR01976 am_tr_V_VC1184 cyste 100.0 4.3E-33 9.2E-38 305.2 33.3 229 136-388 3-239 (397)
18 PRK02948 cysteine desulfurase; 100.0 1.6E-31 3.5E-36 292.1 34.1 204 150-382 1-216 (381)
19 PRK14012 cysteine desulfurase; 100.0 8.5E-31 1.8E-35 289.9 33.1 212 150-388 4-228 (404)
20 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.9E-30 4.2E-35 281.5 35.0 209 151-382 1-216 (376)
21 PRK03080 phosphoserine aminotr 100.0 5.4E-31 1.2E-35 290.8 24.0 208 144-389 6-218 (378)
22 cd06453 SufS_like Cysteine des 100.0 4.6E-30 1E-34 278.7 29.8 210 151-389 1-224 (373)
23 cd00611 PSAT_like Phosphoserin 100.0 9.9E-30 2.1E-34 278.4 21.3 203 155-388 4-215 (355)
24 TIGR03235 DNA_S_dndA cysteine 100.0 2E-28 4.4E-33 265.2 30.7 203 152-383 1-217 (353)
25 PLN02409 serine--glyoxylate am 99.9 2E-25 4.3E-30 248.3 31.9 218 145-388 4-224 (401)
26 TIGR01788 Glu-decarb-GAD gluta 99.9 2E-24 4.4E-29 244.0 31.9 205 147-381 31-277 (431)
27 cd06451 AGAT_like Alanine-glyo 99.9 2.6E-24 5.6E-29 232.5 30.0 204 155-387 4-208 (356)
28 TIGR02326 transamin_PhnW 2-ami 99.9 1.9E-23 4E-28 227.4 31.7 181 193-386 31-212 (363)
29 TIGR01366 serC_3 phosphoserine 99.9 3.6E-24 7.7E-29 236.0 22.1 170 192-389 36-209 (361)
30 TIGR01364 serC_1 phosphoserine 99.9 7.9E-24 1.7E-28 232.7 23.3 164 197-388 37-207 (349)
31 PTZ00094 serine hydroxymethylt 99.9 2.5E-23 5.3E-28 235.5 27.0 198 156-384 41-263 (452)
32 PRK05355 3-phosphoserine/phosp 99.9 4.6E-24 9.9E-29 235.4 19.4 207 152-388 5-218 (360)
33 PRK13479 2-aminoethylphosphona 99.9 1.2E-20 2.7E-25 205.4 32.3 182 193-387 33-215 (368)
34 PRK13520 L-tyrosine decarboxyl 99.9 3.4E-20 7.3E-25 200.9 31.5 217 136-381 11-236 (371)
35 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.8E-20 8.2E-25 198.4 30.9 179 196-387 30-209 (355)
36 PRK02769 histidine decarboxyla 99.9 2.6E-21 5.6E-26 215.6 20.4 211 150-387 23-253 (380)
37 KOG2142 Molybdenum cofactor su 99.9 5.3E-23 1.1E-27 234.3 2.9 220 140-400 14-251 (728)
38 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.4E-19 5.2E-24 194.8 31.0 219 134-380 4-240 (373)
39 PLN03032 serine decarboxylase; 99.8 2.7E-20 5.9E-25 207.2 20.0 183 189-385 50-254 (374)
40 cd06450 DOPA_deC_like DOPA dec 99.8 5.6E-19 1.2E-23 189.6 24.4 177 193-379 34-230 (345)
41 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 3.1E-19 6.6E-24 197.7 20.8 210 150-387 20-242 (387)
42 PLN02414 glycine dehydrogenase 99.8 5.1E-18 1.1E-22 207.1 30.9 204 148-386 100-320 (993)
43 PLN02414 glycine dehydrogenase 99.8 3.5E-18 7.6E-23 208.5 18.2 173 197-386 568-755 (993)
44 PRK05367 glycine dehydrogenase 99.8 1.8E-16 3.8E-21 193.9 28.4 203 151-389 79-295 (954)
45 PRK05937 8-amino-7-oxononanoat 99.8 2E-16 4.4E-21 174.2 25.8 202 150-380 12-226 (370)
46 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 8E-17 1.7E-21 175.9 20.9 179 197-388 44-224 (361)
47 PRK00451 glycine dehydrogenase 99.7 6.5E-16 1.4E-20 173.8 28.8 174 196-389 111-293 (447)
48 PRK08134 O-acetylhomoserine am 99.7 8.3E-17 1.8E-21 182.4 19.7 162 190-380 61-226 (433)
49 PRK04366 glycine dehydrogenase 99.7 3E-15 6.5E-20 171.5 32.3 174 196-387 112-298 (481)
50 PRK08064 cystathionine beta-ly 99.7 2E-16 4.3E-21 176.6 20.1 158 198-380 55-216 (390)
51 cd00616 AHBA_syn 3-amino-5-hyd 99.7 1.3E-15 2.8E-20 163.8 24.7 167 197-386 18-189 (352)
52 PLN02452 phosphoserine transam 99.7 1.1E-15 2.4E-20 169.9 23.7 205 150-387 7-221 (365)
53 TIGR00474 selA seryl-tRNA(sec) 99.7 5.2E-16 1.1E-20 177.0 20.9 214 149-388 81-310 (454)
54 cd01494 AAT_I Aspartate aminot 99.7 4.7E-16 1E-20 147.7 17.2 163 199-379 2-170 (170)
55 TIGR01437 selA_rel uncharacter 99.7 1.3E-15 2.9E-20 168.2 17.8 195 156-388 20-231 (363)
56 TIGR02539 SepCysS Sep-tRNA:Cys 99.7 4.3E-15 9.4E-20 163.6 20.2 179 198-389 52-232 (370)
57 cd00613 GDC-P Glycine cleavage 99.7 4.8E-15 1.1E-19 162.9 20.1 212 150-389 22-249 (398)
58 PRK04311 selenocysteine syntha 99.7 4.5E-15 9.7E-20 169.8 20.3 208 149-387 86-314 (464)
59 TIGR03799 NOD_PanD_pyr putativ 99.6 3.5E-14 7.6E-19 164.6 21.9 179 191-381 123-349 (522)
60 COG0075 Serine-pyruvate aminot 99.6 4.5E-14 9.7E-19 157.6 19.5 205 156-388 11-216 (383)
61 TIGR01329 cysta_beta_ly_E cyst 99.6 1.7E-14 3.7E-19 160.6 15.7 165 199-388 49-218 (378)
62 cd00615 Orn_deC_like Ornithine 99.6 1.4E-14 3E-19 155.2 14.3 169 197-381 59-236 (294)
63 TIGR01822 2am3keto_CoA 2-amino 99.6 3.2E-14 6.9E-19 156.4 17.2 171 197-387 83-261 (393)
64 PLN02880 tyrosine decarboxylas 99.6 1.6E-12 3.4E-17 150.0 30.8 230 135-380 65-322 (490)
65 PRK08114 cystathionine beta-ly 99.6 3.1E-14 6.7E-19 160.0 15.8 166 189-382 58-229 (395)
66 PRK05613 O-acetylhomoserine am 99.6 5.2E-14 1.1E-18 160.0 17.1 161 198-380 70-232 (437)
67 PRK00011 glyA serine hydroxyme 99.6 3.6E-14 7.8E-19 158.0 14.5 173 197-387 70-250 (416)
68 cd00378 SHMT Serine-glycine hy 99.5 1E-13 2.2E-18 153.0 15.1 211 155-386 25-245 (402)
69 TIGR01324 cysta_beta_ly_B cyst 99.5 2.1E-13 4.6E-18 152.2 17.3 171 189-386 46-219 (377)
70 PRK08861 cystathionine gamma-s 99.5 3.7E-13 8E-18 151.0 18.5 163 189-379 49-215 (388)
71 PLN02271 serine hydroxymethylt 99.5 5.1E-13 1.1E-17 154.7 19.2 216 156-388 155-383 (586)
72 cd06454 KBL_like KBL_like; thi 99.5 4.7E-13 1E-17 143.7 17.5 170 196-387 45-222 (349)
73 PRK09028 cystathionine beta-ly 99.5 3.2E-13 7E-18 151.8 16.6 152 190-368 58-211 (394)
74 TIGR01141 hisC histidinol-phos 99.5 5.2E-13 1.1E-17 144.4 16.7 207 150-388 21-234 (346)
75 TIGR03588 PseC UDP-4-keto-6-de 99.5 5.7E-13 1.2E-17 147.1 16.9 171 198-387 30-207 (380)
76 PRK08248 O-acetylhomoserine am 99.5 1.2E-12 2.7E-17 148.5 18.9 164 190-381 61-227 (431)
77 PRK09105 putative aminotransfe 99.5 9.6E-13 2.1E-17 145.6 17.2 208 145-387 40-256 (370)
78 PRK07503 methionine gamma-lyas 99.5 7E-13 1.5E-17 149.0 16.3 169 190-386 62-234 (403)
79 PRK05939 hypothetical protein; 99.5 1.3E-12 2.8E-17 146.8 18.2 152 190-368 44-196 (397)
80 PRK05994 O-acetylhomoserine am 99.5 1.6E-12 3.6E-17 147.2 19.2 159 199-380 65-225 (427)
81 PRK07812 O-acetylhomoserine am 99.5 1.4E-12 3E-17 148.5 18.2 166 190-382 66-234 (436)
82 PRK08960 hypothetical protein; 99.5 1.8E-12 3.8E-17 143.4 18.5 215 143-387 27-257 (387)
83 PRK07504 O-succinylhomoserine 99.5 2.9E-12 6.4E-17 143.8 20.5 199 143-378 24-225 (398)
84 PRK08133 O-succinylhomoserine 99.5 1.4E-12 3.1E-17 145.8 17.8 159 198-381 62-225 (390)
85 PRK07179 hypothetical protein; 99.5 2.2E-12 4.7E-17 143.8 19.0 163 198-386 100-270 (407)
86 PRK06225 aspartate aminotransf 99.4 1.8E-12 4E-17 142.8 17.2 210 148-388 28-249 (380)
87 PRK08574 cystathionine gamma-s 99.4 3.8E-12 8.2E-17 142.4 17.6 163 189-379 49-214 (385)
88 TIGR02080 O_succ_thio_ly O-suc 99.4 5.9E-12 1.3E-16 140.8 18.6 163 189-379 47-213 (382)
89 PRK08045 cystathionine gamma-s 99.4 5.9E-12 1.3E-16 141.0 18.5 162 189-378 48-213 (386)
90 PRK11658 UDP-4-amino-4-deoxy-L 99.4 6E-12 1.3E-16 139.9 18.4 168 198-387 34-204 (379)
91 PRK05367 glycine dehydrogenase 99.4 1.3E-11 2.7E-16 151.8 22.5 170 196-383 541-726 (954)
92 PRK12462 phosphoserine aminotr 99.4 4.1E-11 9E-16 133.7 24.5 171 193-387 45-219 (364)
93 TIGR01328 met_gam_lyase methio 99.4 4.1E-12 8.9E-17 142.3 16.7 171 189-387 55-229 (391)
94 TIGR01325 O_suc_HS_sulf O-succ 99.4 3.2E-12 6.8E-17 142.4 15.6 172 189-387 50-224 (380)
95 PRK07050 cystathionine beta-ly 99.4 2.4E-12 5.1E-17 144.4 14.5 171 189-387 61-236 (394)
96 TIGR01326 OAH_OAS_sulfhy OAH/O 99.4 7.1E-12 1.5E-16 141.4 18.4 165 189-381 53-220 (418)
97 PRK08776 cystathionine gamma-s 99.4 7.9E-12 1.7E-16 140.9 18.7 165 189-380 56-223 (405)
98 PRK06460 hypothetical protein; 99.4 2.7E-12 5.8E-17 143.0 14.6 167 198-387 46-215 (376)
99 PRK06767 methionine gamma-lyas 99.4 6E-12 1.3E-16 140.4 17.2 169 189-385 57-229 (386)
100 PRK07811 cystathionine gamma-s 99.4 4.2E-12 9.1E-17 142.0 15.8 159 199-381 63-225 (388)
101 PRK08249 cystathionine gamma-s 99.4 3.1E-12 6.6E-17 143.8 14.5 166 198-387 65-234 (398)
102 PRK00950 histidinol-phosphate 99.4 1.6E-11 3.4E-16 133.7 19.5 227 125-387 11-246 (361)
103 cd00609 AAT_like Aspartate ami 99.4 3.4E-12 7.3E-17 135.3 13.8 176 198-387 37-228 (350)
104 PLN02721 threonine aldolase 99.4 1.4E-12 3E-17 140.6 11.0 180 199-387 42-229 (353)
105 PRK07810 O-succinylhomoserine 99.4 9.6E-12 2.1E-16 140.0 18.2 166 189-382 66-235 (403)
106 cd00614 CGS_like CGS_like: Cys 99.4 4.5E-12 9.8E-17 140.3 15.2 168 198-388 41-212 (369)
107 PRK05957 aspartate aminotransf 99.4 2.4E-11 5.2E-16 134.8 20.5 215 148-387 27-256 (389)
108 PRK06176 cystathionine gamma-s 99.4 1.3E-11 2.9E-16 137.8 18.5 163 189-379 46-211 (380)
109 PRK07582 cystathionine gamma-l 99.4 1.1E-11 2.3E-16 137.6 17.3 160 189-379 47-209 (366)
110 cd06502 TA_like Low-specificit 99.4 2.6E-12 5.6E-17 137.7 11.1 177 197-388 32-218 (338)
111 PLN02263 serine decarboxylase 99.3 5.1E-11 1.1E-15 136.6 21.5 178 194-383 130-319 (470)
112 TIGR00858 bioF 8-amino-7-oxono 99.3 4.2E-11 9.1E-16 128.8 19.4 166 197-386 61-236 (360)
113 PRK07908 hypothetical protein; 99.3 2.4E-11 5.3E-16 132.4 17.8 203 148-389 22-229 (349)
114 PRK05968 hypothetical protein; 99.3 1.5E-11 3.2E-16 137.7 16.3 164 199-387 65-232 (389)
115 COG3844 Kynureninase [Amino ac 99.3 4.3E-11 9.3E-16 129.9 18.8 232 135-389 18-253 (407)
116 PRK06234 methionine gamma-lyas 99.3 2.3E-11 5.1E-16 136.5 17.1 170 190-387 61-236 (400)
117 PRK07337 aminotransferase; Val 99.3 5E-11 1.1E-15 131.8 18.9 209 149-387 31-255 (388)
118 PRK13238 tnaA tryptophanase/L- 99.3 4.7E-11 1E-15 136.8 19.1 175 199-389 80-284 (460)
119 PRK12566 glycine dehydrogenase 99.3 1.3E-11 2.8E-16 149.9 14.9 176 196-389 542-729 (954)
120 TIGR02379 ECA_wecE TDP-4-keto- 99.3 3.1E-11 6.6E-16 134.7 16.7 168 197-388 31-205 (376)
121 PLN02509 cystathionine beta-ly 99.3 4E-11 8.7E-16 137.6 18.0 158 199-381 135-296 (464)
122 PLN03226 serine hydroxymethylt 99.3 5.7E-11 1.2E-15 136.7 18.5 172 197-385 80-265 (475)
123 PRK14807 histidinol-phosphate 99.3 7.3E-11 1.6E-15 129.2 18.4 207 150-386 24-235 (351)
124 PRK03158 histidinol-phosphate 99.3 6.9E-11 1.5E-15 129.0 17.8 219 134-388 17-246 (359)
125 PRK05387 histidinol-phosphate 99.3 6.2E-11 1.3E-15 128.7 16.8 205 148-387 24-233 (353)
126 PRK08056 threonine-phosphate d 99.3 9.7E-11 2.1E-15 128.4 17.9 195 150-378 22-226 (356)
127 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.3 1.8E-10 3.8E-15 127.8 19.9 159 197-380 31-195 (375)
128 PRK06084 O-acetylhomoserine am 99.3 8E-11 1.7E-15 133.6 17.5 164 190-380 55-220 (425)
129 PRK08361 aspartate aminotransf 99.3 3.4E-11 7.3E-16 133.4 13.6 168 200-386 73-259 (391)
130 PRK05958 8-amino-7-oxononanoat 99.3 2.8E-10 6E-15 124.1 20.4 165 197-384 84-256 (385)
131 PRK03321 putative aminotransfe 99.3 4.8E-11 1E-15 129.9 14.4 207 149-388 23-240 (352)
132 TIGR00461 gcvP glycine dehydro 99.3 7.1E-11 1.5E-15 144.0 17.3 171 196-383 529-714 (939)
133 PRK02731 histidinol-phosphate 99.3 1.9E-10 4.1E-15 125.8 19.1 171 200-387 70-248 (367)
134 PRK07671 cystathionine beta-ly 99.3 1.5E-10 3.3E-15 129.2 18.5 161 190-379 47-211 (377)
135 TIGR01825 gly_Cac_T_rel pyrido 99.3 1.8E-10 3.8E-15 126.4 18.3 168 196-386 77-252 (385)
136 PRK13580 serine hydroxymethylt 99.2 5.6E-11 1.2E-15 136.8 14.5 211 156-386 56-306 (493)
137 PRK06108 aspartate aminotransf 99.2 8.2E-11 1.8E-15 128.9 14.9 173 200-387 64-255 (382)
138 PLN03026 histidinol-phosphate 99.2 3.7E-10 8E-15 125.5 19.9 225 126-386 30-262 (380)
139 PRK07269 cystathionine gamma-s 99.2 2.6E-10 5.7E-15 126.9 18.2 161 189-379 50-213 (364)
140 PRK07324 transaminase; Validat 99.2 1.2E-10 2.6E-15 128.9 15.2 171 200-387 65-245 (373)
141 PLN02242 methionine gamma-lyas 99.2 1.1E-10 2.3E-15 132.3 15.1 165 199-387 78-247 (418)
142 PRK08912 hypothetical protein; 99.2 1.9E-10 4.2E-15 127.1 16.2 171 201-387 67-255 (387)
143 KOG2862 Alanine-glyoxylate ami 99.2 2.8E-10 6E-15 123.0 16.8 185 190-389 43-229 (385)
144 PRK04870 histidinol-phosphate 99.2 2E-10 4.4E-15 125.4 16.2 209 149-388 27-241 (356)
145 PRK06434 cystathionine gamma-l 99.2 2.5E-10 5.4E-15 128.3 17.0 161 189-379 60-223 (384)
146 PF00282 Pyridoxal_deC: Pyrido 99.2 5.2E-10 1.1E-14 125.1 19.3 232 136-382 23-279 (373)
147 PRK05764 aspartate aminotransf 99.2 1.5E-10 3.3E-15 127.7 14.4 172 199-387 70-261 (393)
148 COG0076 GadB Glutamate decarbo 99.2 3.5E-10 7.6E-15 129.8 17.7 177 193-381 97-292 (460)
149 TIGR03537 DapC succinyldiamino 99.2 2.1E-10 4.6E-15 125.3 15.0 169 201-387 40-229 (350)
150 PRK07309 aromatic amino acid a 99.2 2.6E-10 5.7E-15 126.7 15.9 173 200-387 70-260 (391)
151 PRK06939 2-amino-3-ketobutyrat 99.2 2.9E-10 6.3E-15 124.6 16.0 171 197-387 87-265 (397)
152 PRK07568 aspartate aminotransf 99.2 1.1E-09 2.4E-14 121.1 20.2 201 149-378 31-249 (397)
153 PRK05967 cystathionine beta-ly 99.2 3E-10 6.6E-15 128.1 16.0 152 190-368 61-214 (395)
154 PLN02483 serine palmitoyltrans 99.2 7.3E-10 1.6E-14 127.9 19.4 174 197-388 146-332 (489)
155 PRK06836 aspartate aminotransf 99.2 3.9E-10 8.5E-15 125.4 16.2 168 199-382 75-262 (394)
156 PRK06207 aspartate aminotransf 99.2 2.5E-09 5.5E-14 119.9 21.8 225 136-387 28-274 (405)
157 PRK09265 aminotransferase AlaT 99.2 3.5E-09 7.6E-14 118.1 22.5 197 149-378 34-254 (404)
158 PRK04635 histidinol-phosphate 99.2 1.3E-10 2.7E-15 127.4 10.8 169 200-388 63-238 (354)
159 PRK08247 cystathionine gamma-s 99.1 1.5E-09 3.2E-14 120.5 19.1 162 189-378 48-211 (366)
160 PLN02590 probable tyrosine dec 99.1 3.3E-09 7.1E-14 124.0 22.5 233 135-381 113-371 (539)
161 PRK13034 serine hydroxymethylt 99.1 6.6E-10 1.4E-14 125.6 16.2 165 197-381 73-246 (416)
162 PF01041 DegT_DnrJ_EryC1: DegT 99.1 1.2E-09 2.6E-14 120.7 17.9 161 197-381 25-190 (363)
163 TIGR03540 DapC_direct LL-diami 99.1 6.1E-10 1.3E-14 122.9 15.1 169 200-386 70-259 (383)
164 PRK07681 aspartate aminotransf 99.1 6.1E-10 1.3E-14 124.0 15.2 171 199-387 71-262 (399)
165 TIGR01140 L_thr_O3P_dcar L-thr 99.1 2.8E-10 6.1E-15 123.7 11.9 162 200-388 50-218 (330)
166 PRK03967 histidinol-phosphate 99.1 1.3E-09 2.8E-14 119.1 16.6 204 150-386 20-226 (337)
167 PRK08363 alanine aminotransfer 99.1 8E-10 1.7E-14 122.8 15.3 164 199-378 72-251 (398)
168 PRK12414 putative aminotransfe 99.1 3.3E-09 7.1E-14 117.7 20.0 212 149-387 30-258 (384)
169 KOG3846 L-kynurenine hydrolase 99.1 2.5E-08 5.4E-13 108.0 25.4 220 150-389 68-301 (465)
170 TIGR01365 serC_2 phosphoserine 99.1 3.4E-10 7.3E-15 126.9 11.7 173 190-387 32-207 (374)
171 PRK15407 lipopolysaccharide bi 99.1 2.3E-09 5E-14 122.3 18.2 162 198-383 64-238 (438)
172 PRK06702 O-acetylhomoserine am 99.1 2.5E-09 5.4E-14 122.0 18.4 162 191-378 59-222 (432)
173 PRK09276 LL-diaminopimelate am 99.1 9E-10 2E-14 121.6 14.4 171 199-387 71-262 (385)
174 PRK05166 histidinol-phosphate 99.1 4.8E-09 1E-13 115.8 19.9 215 130-379 20-246 (371)
175 PRK07683 aminotransferase A; V 99.1 1.9E-09 4E-14 119.8 16.2 172 199-386 67-255 (387)
176 PRK07550 hypothetical protein; 99.1 1.2E-09 2.6E-14 120.8 14.6 172 201-387 71-259 (386)
177 PRK13355 bifunctional HTH-doma 99.1 4.5E-09 9.8E-14 121.6 19.2 198 149-379 147-368 (517)
178 PRK05942 aspartate aminotransf 99.1 1.6E-09 3.4E-14 120.5 14.9 174 200-387 76-266 (394)
179 PRK07777 aminotransferase; Val 99.1 2.7E-09 5.8E-14 118.1 16.0 172 200-387 64-255 (387)
180 TIGR03531 selenium_SpcS O-phos 99.1 1E-08 2.3E-13 117.3 21.2 174 196-381 104-289 (444)
181 PRK01688 histidinol-phosphate 99.0 6.2E-10 1.4E-14 122.2 10.4 169 200-388 60-237 (351)
182 TIGR01265 tyr_nico_aTase tyros 99.0 4.7E-09 1E-13 117.3 16.8 165 199-379 75-256 (403)
183 PRK07682 hypothetical protein; 99.0 2.6E-09 5.7E-14 117.6 13.8 173 199-387 59-249 (378)
184 COG1103 Archaea-specific pyrid 99.0 7.5E-09 1.6E-13 110.5 15.6 174 200-386 64-239 (382)
185 PRK09082 methionine aminotrans 99.0 4.6E-09 9.9E-14 116.5 14.6 176 197-387 71-259 (386)
186 PTZ00377 alanine aminotransfer 99.0 1.3E-08 2.9E-13 116.7 17.4 171 150-338 78-259 (481)
187 PLN00175 aminotransferase fami 99.0 1.2E-08 2.6E-13 114.9 16.3 172 201-386 95-281 (413)
188 PRK01533 histidinol-phosphate 99.0 2E-08 4.4E-13 111.4 17.7 218 135-387 18-245 (366)
189 PRK09064 5-aminolevulinate syn 98.9 2.1E-08 4.7E-13 111.7 17.5 168 197-386 91-267 (407)
190 PLN02822 serine palmitoyltrans 98.9 2.8E-08 6.1E-13 114.7 18.2 173 197-387 154-336 (481)
191 cd00610 OAT_like Acetyl ornith 98.9 2E-08 4.4E-13 111.1 16.2 218 148-386 34-281 (413)
192 TIGR01264 tyr_amTase_E tyrosin 98.9 3E-08 6.5E-13 110.5 16.9 163 200-379 76-255 (401)
193 cd00617 Tnase_like Tryptophana 98.9 4E-08 8.7E-13 112.2 18.1 218 137-387 4-257 (431)
194 PTZ00433 tyrosine aminotransfe 98.9 3.3E-08 7.2E-13 110.9 16.9 164 200-378 78-263 (412)
195 PRK13392 5-aminolevulinate syn 98.9 2.1E-08 4.6E-13 112.1 15.0 166 198-386 92-267 (410)
196 PRK13393 5-aminolevulinate syn 98.9 7.9E-08 1.7E-12 107.6 19.1 206 150-386 48-266 (406)
197 PRK06290 aspartate aminotransf 98.9 3.3E-08 7.1E-13 111.5 15.9 170 200-386 84-273 (410)
198 PLN02656 tyrosine transaminase 98.9 4.5E-08 9.8E-13 109.9 16.7 165 200-379 76-256 (409)
199 PRK08153 histidinol-phosphate 98.9 6.2E-08 1.3E-12 107.2 17.3 205 150-387 34-246 (369)
200 PLN02187 rooty/superroot1 98.9 5.1E-08 1.1E-12 111.9 17.0 163 199-378 110-290 (462)
201 PRK07049 methionine gamma-lyas 98.9 6.2E-08 1.3E-12 110.3 17.5 177 189-387 79-265 (427)
202 PRK04781 histidinol-phosphate 98.9 3.7E-08 8E-13 108.9 15.3 181 189-388 55-244 (364)
203 TIGR00461 gcvP glycine dehydro 98.9 8.8E-07 1.9E-11 109.0 28.2 166 196-388 108-282 (939)
204 PLN00145 tyrosine/nicotianamin 98.8 6E-08 1.3E-12 110.1 17.1 203 149-378 53-276 (430)
205 PRK14809 histidinol-phosphate 98.8 1.1E-07 2.4E-12 104.3 18.0 205 149-387 31-245 (357)
206 PRK03317 histidinol-phosphate 98.8 4.3E-08 9.4E-13 107.9 14.8 209 150-387 28-251 (368)
207 PRK09148 aminotransferase; Val 98.8 3.8E-08 8.3E-13 110.3 14.6 173 200-387 71-261 (405)
208 PLN02376 1-aminocyclopropane-1 98.8 9.2E-08 2E-12 110.9 17.8 173 200-381 97-296 (496)
209 PRK06107 aspartate aminotransf 98.8 4.5E-08 9.7E-13 109.4 14.7 174 197-387 74-264 (402)
210 PRK06348 aspartate aminotransf 98.8 6.3E-08 1.4E-12 107.5 14.8 171 201-386 70-256 (384)
211 PF00155 Aminotran_1_2: Aminot 98.8 4.9E-08 1.1E-12 106.1 13.6 181 198-387 45-244 (363)
212 TIGR03576 pyridox_MJ0158 pyrid 98.8 1E-07 2.3E-12 105.6 16.3 165 196-388 53-226 (346)
213 COG0399 WecE Predicted pyridox 98.8 2.5E-07 5.4E-12 104.0 19.3 145 198-364 35-182 (374)
214 PRK08175 aminotransferase; Val 98.8 9.4E-08 2E-12 106.5 15.6 172 200-386 70-259 (395)
215 TIGR01821 5aminolev_synth 5-am 98.8 1.8E-07 3.8E-12 104.4 16.7 168 197-387 90-267 (402)
216 PRK10534 L-threonine aldolase; 98.8 8.8E-08 1.9E-12 103.6 13.8 174 198-387 35-218 (333)
217 TIGR03538 DapC_gpp succinyldia 98.7 3.4E-07 7.4E-12 101.8 18.3 210 149-386 29-266 (393)
218 PRK08068 transaminase; Reviewe 98.7 1.7E-07 3.6E-12 104.1 15.5 172 200-387 73-263 (389)
219 PF01053 Cys_Met_Meta_PP: Cys/ 98.7 3E-07 6.4E-12 103.9 17.0 164 189-380 51-219 (386)
220 PLN00143 tyrosine/nicotianamin 98.7 2.9E-07 6.4E-12 103.5 16.7 164 200-378 77-256 (409)
221 PLN03227 serine palmitoyltrans 98.7 2.4E-07 5.2E-12 104.1 15.7 171 197-386 43-229 (392)
222 COG2008 GLY1 Threonine aldolas 98.7 6.3E-08 1.4E-12 106.9 10.7 195 188-399 29-233 (342)
223 PF01212 Beta_elim_lyase: Beta 98.7 3.9E-08 8.5E-13 107.0 8.6 178 189-383 24-212 (290)
224 PRK06358 threonine-phosphate d 98.7 4.6E-07 1E-11 99.8 17.0 162 199-378 56-227 (354)
225 PRK09147 succinyldiaminopimela 98.7 7E-07 1.5E-11 99.4 18.2 173 200-386 68-267 (396)
226 PRK15481 transcriptional regul 98.7 4.5E-07 9.7E-12 102.4 16.6 168 200-386 124-303 (431)
227 PRK02610 histidinol-phosphate 98.7 3.2E-07 7E-12 101.6 15.1 177 199-387 68-257 (374)
228 PRK07392 threonine-phosphate d 98.7 6E-07 1.3E-11 98.7 17.0 207 150-386 24-238 (360)
229 PF01276 OKR_DC_1: Orn/Lys/Arg 98.7 1.9E-07 4.2E-12 106.2 13.0 173 197-382 66-257 (417)
230 PRK07366 succinyldiaminopimela 98.6 3.6E-07 7.8E-12 101.4 14.8 173 200-386 71-261 (388)
231 TIGR03539 DapC_actino succinyl 98.6 2.2E-07 4.8E-12 102.2 12.6 159 201-386 60-239 (357)
232 TIGR03811 tyr_de_CO2_Ent tyros 98.6 3.8E-06 8.2E-11 99.9 23.4 214 151-382 85-400 (608)
233 PRK08636 aspartate aminotransf 98.6 7E-07 1.5E-11 99.9 16.3 181 200-386 74-270 (403)
234 PRK07865 N-succinyldiaminopime 98.6 2.7E-07 5.8E-12 101.5 12.3 161 201-386 66-245 (364)
235 COG0436 Aspartate/tyrosine/aro 98.6 1.7E-06 3.6E-11 97.9 18.8 209 149-386 29-259 (393)
236 PRK09257 aromatic amino acid a 98.6 7.7E-07 1.7E-11 99.3 15.8 168 200-378 72-260 (396)
237 TIGR02618 tyr_phenol_ly tyrosi 98.6 4.6E-07 1E-11 103.8 13.3 174 199-389 73-277 (450)
238 PRK07505 hypothetical protein; 98.6 1.6E-06 3.6E-11 97.0 17.3 206 148-386 44-271 (402)
239 PRK00854 rocD ornithine--oxo-a 98.6 2E-06 4.4E-11 95.8 17.9 171 197-387 83-279 (401)
240 COG1921 SelA Selenocysteine sy 98.6 7.4E-07 1.6E-11 100.2 14.3 209 150-389 28-246 (395)
241 PF00464 SHMT: Serine hydroxym 98.5 6.8E-07 1.5E-11 101.4 13.0 169 197-379 66-245 (399)
242 COG2873 MET17 O-acetylhomoseri 98.5 1.8E-06 3.9E-11 96.1 15.3 167 190-383 59-227 (426)
243 PRK13237 tyrosine phenol-lyase 98.5 2.9E-06 6.2E-11 97.7 16.8 218 136-387 28-282 (460)
244 PLN02607 1-aminocyclopropane-1 98.5 3.1E-06 6.8E-11 97.1 17.1 171 200-378 98-293 (447)
245 PTZ00125 ornithine aminotransf 98.5 2.4E-06 5.3E-11 94.9 15.8 208 148-387 29-270 (400)
246 PRK15029 arginine decarboxylas 98.5 2.7E-06 5.8E-11 103.1 17.0 175 197-381 205-402 (755)
247 PRK03244 argD acetylornithine 98.5 2.3E-06 5.1E-11 95.2 15.4 168 200-387 88-274 (398)
248 PRK06425 histidinol-phosphate 98.5 1.5E-06 3.2E-11 95.0 13.4 165 199-387 42-216 (332)
249 TIGR00707 argD acetylornithine 98.5 2.9E-06 6.2E-11 93.2 15.7 171 197-387 69-261 (379)
250 COG1167 ARO8 Transcriptional r 98.5 3.3E-06 7.2E-11 97.2 16.6 171 201-387 136-321 (459)
251 PLN02368 alanine transaminase 98.5 2.2E-06 4.8E-11 97.2 14.7 180 200-387 110-318 (407)
252 TIGR03542 DAPAT_plant LL-diami 98.5 2.2E-06 4.8E-11 96.0 14.5 203 149-382 34-264 (402)
253 PRK14808 histidinol-phosphate 98.4 1.8E-06 4E-11 94.7 13.4 197 150-387 21-225 (335)
254 PLN02450 1-aminocyclopropane-1 98.4 1.9E-06 4.1E-11 99.2 12.8 130 200-338 89-232 (468)
255 PRK08354 putative aminotransfe 98.4 1.6E-05 3.4E-10 86.2 18.9 147 200-378 43-196 (311)
256 PLN02231 alanine transaminase 98.4 5.1E-06 1.1E-10 97.5 15.9 132 199-338 170-312 (534)
257 PRK05839 hypothetical protein; 98.4 1.6E-05 3.5E-10 88.4 18.4 169 201-386 64-254 (374)
258 PRK06855 aminotransferase; Val 98.4 1.1E-05 2.4E-10 91.7 17.5 163 200-378 76-257 (433)
259 PRK05664 threonine-phosphate d 98.3 1.3E-05 2.9E-10 87.5 15.9 159 200-387 52-215 (330)
260 TIGR03801 asp_4_decarbox aspar 98.3 2.5E-05 5.5E-10 91.6 18.6 150 217-381 156-327 (521)
261 COG0079 HisC Histidinol-phosph 98.3 1.7E-05 3.6E-10 89.0 16.2 205 149-388 23-236 (356)
262 PRK04073 rocD ornithine--oxo-a 98.3 1.7E-05 3.8E-10 88.7 16.2 168 199-387 84-278 (396)
263 PRK07590 L,L-diaminopimelate a 98.3 1.1E-05 2.3E-10 90.7 14.3 164 200-384 79-269 (409)
264 KOG0257 Kynurenine aminotransf 98.2 2.2E-05 4.7E-10 88.6 15.1 176 197-388 73-269 (420)
265 PF03841 SelA: L-seryl-tRNA se 98.2 6.4E-07 1.4E-11 100.0 3.1 171 198-388 48-235 (367)
266 PRK01278 argD acetylornithine 98.2 3.9E-05 8.5E-10 85.4 16.6 208 148-387 29-266 (389)
267 PRK09440 avtA valine--pyruvate 98.2 1.3E-05 2.9E-10 89.8 12.0 171 200-386 77-270 (416)
268 PRK08637 hypothetical protein; 98.1 5.8E-05 1.3E-09 84.3 16.8 132 199-338 46-192 (388)
269 KOG0053 Cystathionine beta-lya 98.1 7.3E-05 1.6E-09 84.9 17.3 154 189-368 73-227 (409)
270 PTZ00376 aspartate aminotransf 98.1 1.9E-05 4.1E-10 88.7 12.8 167 199-377 74-264 (404)
271 KOG1368 Threonine aldolase [Am 98.1 1.9E-06 4E-11 93.6 4.3 197 188-398 50-257 (384)
272 PRK09275 aspartate aminotransf 98.1 3.3E-05 7.2E-10 90.7 14.0 149 217-381 162-328 (527)
273 PRK13578 ornithine decarboxyla 98.1 4.8E-05 1E-09 91.9 15.5 177 197-383 174-373 (720)
274 COG1932 SerC Phosphoserine ami 98.0 4E-05 8.6E-10 85.4 12.3 167 197-388 50-222 (365)
275 KOG0259 Tyrosine aminotransfer 98.0 6.9E-05 1.5E-09 83.9 13.9 129 197-338 103-240 (447)
276 PRK06959 putative threonine-ph 98.0 7.6E-05 1.7E-09 82.3 14.3 159 200-387 56-221 (339)
277 PRK04260 acetylornithine amino 98.0 0.00013 2.9E-09 81.0 15.1 172 200-386 69-255 (375)
278 COG1168 MalY Bifunctional PLP- 98.0 0.00041 9E-09 77.9 18.8 197 161-381 39-249 (388)
279 COG0626 MetC Cystathionine bet 98.0 0.00039 8.4E-09 79.2 18.7 154 189-368 59-214 (396)
280 PRK02627 acetylornithine amino 97.9 0.00025 5.4E-09 78.7 16.9 172 197-387 81-273 (396)
281 COG0156 BioF 7-keto-8-aminopel 97.9 0.00026 5.6E-09 80.5 16.1 161 197-379 84-253 (388)
282 PLN02672 methionine S-methyltr 97.9 0.00038 8.2E-09 87.5 18.8 165 150-339 699-871 (1082)
283 PLN02955 8-amino-7-oxononanoat 97.9 0.00025 5.4E-09 82.5 15.4 170 197-387 147-339 (476)
284 TIGR01885 Orn_aminotrans ornit 97.7 0.0013 2.9E-08 73.8 18.0 173 197-387 79-278 (401)
285 COG0112 GlyA Glycine/serine hy 97.7 0.00023 4.9E-09 80.3 11.3 214 156-390 33-254 (413)
286 PLN02624 ornithine-delta-amino 97.7 0.00074 1.6E-08 78.3 15.8 173 198-387 118-316 (474)
287 KOG1383 Glutamate decarboxylas 97.7 0.00037 8.1E-09 79.8 12.8 174 193-381 116-305 (491)
288 PRK15399 lysine decarboxylase 97.7 0.0013 2.9E-08 79.8 17.7 169 197-381 195-383 (713)
289 PRK02936 argD acetylornithine 97.7 0.00073 1.6E-08 74.9 14.5 166 201-386 71-257 (377)
290 PRK15400 lysine decarboxylase 97.6 0.00052 1.1E-08 83.2 13.5 170 197-381 195-383 (714)
291 PRK03715 argD acetylornithine 97.6 0.0013 2.9E-08 74.5 15.4 155 218-383 95-266 (395)
292 PRK05093 argD bifunctional N-s 97.5 0.0027 5.8E-08 71.5 17.3 206 148-387 38-275 (403)
293 COG1982 LdcC Arginine/lysine/o 97.5 0.0014 3E-08 77.3 14.8 167 197-380 70-247 (557)
294 TIGR00713 hemL glutamate-1-sem 97.5 0.0018 3.9E-08 73.3 14.9 206 148-387 46-285 (423)
295 PRK05964 adenosylmethionine--8 97.4 0.0031 6.7E-08 71.8 16.1 219 148-387 40-292 (423)
296 PLN02397 aspartate transaminas 97.4 0.0016 3.5E-08 74.1 13.5 168 199-377 93-282 (423)
297 TIGR03246 arg_catab_astC succi 97.3 0.0047 1E-07 69.7 16.0 206 148-387 33-270 (397)
298 TIGR02617 tnaA_trp_ase tryptop 97.3 0.002 4.3E-08 74.5 12.4 202 150-381 41-281 (467)
299 KOG0629 Glutamate decarboxylas 97.3 0.0014 3.1E-08 74.5 10.5 173 201-382 145-338 (510)
300 PRK12381 bifunctional succinyl 97.1 0.0098 2.1E-07 67.4 15.6 206 148-387 37-274 (406)
301 PRK04013 argD acetylornithine/ 97.0 0.011 2.4E-07 66.6 15.0 201 148-382 22-247 (364)
302 COG1003 GcvP Glycine cleavage 97.0 0.0066 1.4E-07 69.5 13.0 167 197-386 109-293 (496)
303 KOG0256 1-aminocyclopropane-1- 97.0 0.0038 8.3E-08 70.9 11.0 131 201-339 125-268 (471)
304 TIGR02407 ectoine_ectB diamino 97.0 0.032 6.9E-07 63.7 18.4 219 148-382 33-281 (412)
305 PF06838 Met_gamma_lyase: Meth 96.9 0.0052 1.1E-07 69.3 10.9 167 202-386 59-245 (403)
306 PRK00062 glutamate-1-semialdeh 96.9 0.013 2.8E-07 67.1 14.3 210 148-387 48-287 (426)
307 PRK09264 diaminobutyrate--2-ox 96.7 0.048 1E-06 62.5 16.9 173 201-382 86-285 (425)
308 PF02347 GDC-P: Glycine cleava 96.6 0.019 4E-07 66.4 12.2 162 196-387 109-284 (429)
309 KOG1360 5-aminolevulinate synt 96.6 0.017 3.6E-07 65.7 11.4 146 201-368 220-377 (570)
310 KOG0634 Aromatic amino acid am 96.5 0.018 4E-07 65.9 11.2 135 197-338 104-245 (472)
311 PF05889 SLA_LP_auto_ag: Solub 96.4 0.0018 4E-08 73.4 2.5 152 203-367 62-235 (389)
312 TIGR03372 putres_am_tran putre 96.3 0.12 2.6E-06 60.1 16.9 213 148-386 73-315 (442)
313 PRK08360 4-aminobutyrate amino 96.3 0.25 5.5E-06 57.2 19.1 177 201-387 88-295 (443)
314 PRK11522 putrescine--2-oxoglut 96.2 0.13 2.7E-06 60.1 16.4 213 148-386 80-322 (459)
315 PRK05769 4-aminobutyrate amino 96.2 0.22 4.7E-06 57.7 18.0 81 301-384 221-309 (441)
316 COG0403 GcvP Glycine cleavage 96.2 0.11 2.4E-06 59.7 15.1 166 197-386 120-297 (450)
317 PF12897 Aminotran_MocR: Alani 96.1 0.096 2.1E-06 59.8 14.3 134 197-343 69-220 (425)
318 PRK00615 glutamate-1-semialdeh 96.1 0.12 2.7E-06 59.7 15.5 211 148-388 51-292 (433)
319 PRK06062 hypothetical protein; 96.1 0.22 4.7E-06 57.9 17.3 218 148-387 51-306 (451)
320 PRK06058 4-aminobutyrate amino 96.0 0.21 4.6E-06 57.7 16.8 82 301-387 219-310 (443)
321 COG1448 TyrB Aspartate/tyrosin 96.0 0.12 2.6E-06 58.8 14.2 202 150-379 34-261 (396)
322 PRK08117 4-aminobutyrate amino 96.0 0.18 3.9E-06 57.8 16.1 219 148-386 41-297 (433)
323 PRK12389 glutamate-1-semialdeh 96.0 0.35 7.5E-06 55.7 18.4 208 148-387 51-290 (428)
324 PRK12566 glycine dehydrogenase 95.9 0.075 1.6E-06 66.6 13.5 215 130-388 61-296 (954)
325 PLN02482 glutamate-1-semialdeh 95.9 0.29 6.2E-06 57.5 17.5 208 148-388 97-337 (474)
326 PRK13360 omega amino acid--pyr 95.6 0.35 7.6E-06 56.0 16.8 218 148-386 44-306 (442)
327 COG0001 HemL Glutamate-1-semia 95.6 0.31 6.8E-06 56.5 16.0 213 148-397 51-300 (432)
328 PRK09221 beta alanine--pyruvat 95.6 0.21 4.5E-06 58.0 14.5 95 284-386 205-309 (445)
329 KOG2467 Glycine/serine hydroxy 95.5 0.081 1.8E-06 59.9 10.4 168 197-382 86-268 (477)
330 KOG1357 Serine palmitoyltransf 95.4 0.043 9.4E-07 63.3 8.0 171 197-387 182-367 (519)
331 PRK06541 hypothetical protein; 95.4 0.29 6.3E-06 57.1 14.8 95 284-387 208-313 (460)
332 COG4100 Cystathionine beta-lya 95.3 0.24 5.2E-06 55.1 12.8 165 205-384 73-254 (416)
333 PLN02760 4-aminobutyrate:pyruv 95.1 0.49 1.1E-05 55.9 15.9 95 284-387 247-352 (504)
334 PRK09792 4-aminobutyrate trans 95.1 1.4 2.9E-05 50.8 19.0 222 148-387 38-289 (421)
335 PRK12403 putative aminotransfe 95.1 0.41 8.9E-06 55.8 14.9 181 199-387 100-314 (460)
336 PRK07046 aminotransferase; Val 95.0 0.55 1.2E-05 54.7 15.7 203 148-387 73-307 (453)
337 PRK07495 4-aminobutyrate amino 95.0 1 2.3E-05 51.9 17.8 222 148-387 38-289 (425)
338 COG4992 ArgD Ornithine/acetylo 95.0 0.34 7.4E-06 55.7 13.6 211 149-390 41-278 (404)
339 COG0160 GabT 4-aminobutyrate a 95.0 1.5 3.3E-05 51.3 19.0 220 148-384 54-310 (447)
340 KOG2040 Glycine dehydrogenase 95.0 0.31 6.8E-06 58.5 13.4 170 197-387 582-770 (1001)
341 PRK08593 4-aminobutyrate amino 94.8 1.3 2.8E-05 51.4 18.1 179 200-387 88-298 (445)
342 TIGR00700 GABAtrnsam 4-aminobu 94.7 1.5 3.2E-05 50.3 17.9 222 148-387 31-288 (420)
343 PRK07480 putative aminotransfe 94.5 1.1 2.3E-05 52.4 16.3 81 301-386 219-310 (456)
344 PRK08088 4-aminobutyrate amino 94.3 1.4 3.1E-05 50.5 16.6 98 284-387 185-290 (425)
345 KOG0628 Aromatic-L-amino-acid/ 94.3 0.15 3.2E-06 59.3 8.5 128 244-382 184-320 (511)
346 COG3977 Alanine-alpha-ketoisov 94.2 0.27 5.8E-06 54.7 9.9 98 299-404 177-283 (417)
347 PRK04612 argD acetylornithine 94.0 0.95 2.1E-05 52.0 14.5 94 282-386 175-277 (408)
348 KOG0258 Alanine aminotransfera 94.0 0.72 1.6E-05 52.9 13.0 133 196-338 112-256 (475)
349 PRK06082 4-aminobutyrate amino 94.0 1.5 3.3E-05 51.2 16.3 209 148-382 70-315 (459)
350 PLN00144 acetylornithine trans 93.9 0.87 1.9E-05 51.6 13.7 96 282-387 155-258 (382)
351 PF00202 Aminotran_3: Aminotra 93.5 0.23 5.1E-06 55.3 8.2 182 198-388 60-269 (339)
352 PRK07678 aminotransferase; Val 93.4 1.2 2.6E-05 51.8 14.1 83 301-387 213-305 (451)
353 PRK06777 4-aminobutyrate amino 93.4 3.4 7.4E-05 47.6 17.5 222 148-387 38-289 (421)
354 PRK07036 hypothetical protein; 93.3 1.8 3.9E-05 50.6 15.4 83 300-387 219-313 (466)
355 TIGR00699 GABAtrns_euk 4-amino 92.9 6.5 0.00014 46.4 19.0 53 283-340 238-295 (464)
356 PRK07481 hypothetical protein; 92.8 2 4.4E-05 50.0 14.7 82 301-387 213-305 (449)
357 KOG1359 Glycine C-acetyltransf 92.8 0.41 8.9E-06 53.2 8.4 144 200-368 115-267 (417)
358 PRK05965 hypothetical protein; 92.4 2.3 4.9E-05 49.7 14.5 98 284-387 202-307 (459)
359 PRK06105 aminotransferase; Pro 92.1 1.2 2.7E-05 51.9 11.9 95 284-387 205-310 (460)
360 PRK06943 adenosylmethionine--8 92.0 3.5 7.6E-05 48.1 15.3 220 148-386 52-313 (453)
361 PRK07482 hypothetical protein; 91.9 3.4 7.4E-05 48.3 15.2 98 283-386 206-311 (461)
362 PRK06209 glutamate-1-semialdeh 91.4 3.9 8.5E-05 47.3 14.9 166 148-340 46-227 (431)
363 PRK07986 adenosylmethionine--8 91.4 3.4 7.5E-05 47.9 14.3 220 148-387 41-297 (428)
364 PRK06916 adenosylmethionine--8 91.0 3.1 6.7E-05 48.7 13.6 220 148-386 54-315 (460)
365 PRK07030 adenosylmethionine--8 91.0 4.1 8.9E-05 47.8 14.6 94 284-386 202-306 (466)
366 PRK05639 4-aminobutyrate amino 90.7 13 0.00028 43.6 18.3 178 200-384 99-310 (457)
367 cd00613 GDC-P Glycine cleavage 90.4 0.87 1.9E-05 50.7 8.2 100 694-848 298-397 (398)
368 PRK07483 hypothetical protein; 90.1 5.1 0.00011 46.7 14.2 82 301-387 199-292 (443)
369 PRK06918 4-aminobutyrate amino 90.0 12 0.00027 43.4 17.3 84 301-387 219-310 (451)
370 PRK09064 5-aminolevulinate syn 89.9 1.5 3.3E-05 49.4 9.7 107 692-854 290-396 (407)
371 KOG2790 Phosphoserine aminotra 89.8 2.3 5.1E-05 47.3 10.4 164 196-387 51-226 (370)
372 PRK07179 hypothetical protein; 89.4 1.9 4.1E-05 48.8 9.8 104 694-855 295-398 (407)
373 PRK06917 hypothetical protein; 89.0 14 0.00031 43.1 16.9 82 301-387 199-292 (447)
374 PRK08742 adenosylmethionine--8 89.0 7.3 0.00016 45.9 14.5 81 301-386 236-328 (472)
375 PLN02721 threonine aldolase 88.8 3.4 7.3E-05 45.1 11.0 90 709-855 263-352 (353)
376 TIGR01329 cysta_beta_ly_E cyst 88.5 0.27 5.8E-06 55.7 2.3 133 691-854 236-374 (378)
377 TIGR00709 dat 2,4-diaminobutyr 88.4 21 0.00045 41.5 17.7 75 302-381 208-291 (442)
378 PRK06149 hypothetical protein; 88.3 19 0.00041 46.3 18.6 180 199-388 626-837 (972)
379 PRK06173 adenosylmethionine--8 87.8 12 0.00027 43.4 15.2 94 283-386 193-298 (429)
380 PRK07908 hypothetical protein; 87.2 3 6.5E-05 46.0 9.5 91 704-855 257-347 (349)
381 PRK04635 histidinol-phosphate 85.8 6.2 0.00014 43.8 11.1 98 693-853 253-353 (354)
382 PRK05630 adenosylmethionine--8 85.8 11 0.00025 43.5 13.5 85 301-387 200-293 (422)
383 TIGR01821 5aminolev_synth 5-am 85.6 3.8 8.2E-05 46.2 9.4 107 692-854 289-395 (402)
384 PRK06148 hypothetical protein; 85.6 24 0.00052 45.6 17.4 84 301-387 784-876 (1013)
385 cd06454 KBL_like KBL_like; thi 85.0 6.7 0.00014 42.6 10.7 103 693-851 245-347 (349)
386 PRK05958 8-amino-7-oxononanoat 84.6 5.5 0.00012 43.9 9.9 96 703-853 290-385 (385)
387 PRK13393 5-aminolevulinate syn 84.5 4.1 8.9E-05 46.2 9.1 106 693-854 290-395 (406)
388 TIGR00508 bioA adenosylmethion 84.3 22 0.00049 41.2 15.0 98 283-387 194-300 (427)
389 PLN02994 1-aminocyclopropane-1 83.9 1.7 3.7E-05 43.8 5.1 44 201-247 96-147 (153)
390 TIGR00858 bioF 8-amino-7-oxono 83.5 7.6 0.00016 42.2 10.3 92 703-849 268-359 (360)
391 TIGR03251 LAT_fam L-lysine 6-t 82.4 22 0.00048 41.2 14.0 62 300-361 217-286 (431)
392 TIGR01822 2am3keto_CoA 2-amino 82.3 6.8 0.00015 43.7 9.5 97 701-852 290-386 (393)
393 KOG1358 Serine palmitoyltransf 81.7 15 0.00032 42.8 11.8 168 201-387 143-323 (467)
394 TIGR01141 hisC histidinol-phos 81.6 10 0.00022 41.6 10.5 87 702-849 259-345 (346)
395 PRK06938 diaminobutyrate--2-ox 80.4 70 0.0015 37.7 17.3 93 283-381 215-316 (464)
396 TIGR01437 selA_rel uncharacter 79.8 13 0.00029 41.9 10.8 107 692-853 252-363 (363)
397 PRK06931 diaminobutyrate--2-ox 79.1 59 0.0013 38.3 16.1 77 301-381 225-310 (459)
398 PLN03226 serine hydroxymethylt 78.8 6.9 0.00015 46.2 8.4 75 692-784 302-376 (475)
399 PRK02731 histidinol-phosphate 77.8 14 0.00029 41.0 10.0 93 702-855 274-366 (367)
400 PRK13392 5-aminolevulinate syn 70.7 18 0.00038 41.1 8.8 106 692-853 290-395 (410)
401 cd00614 CGS_like CGS_like: Cys 70.2 6.7 0.00014 44.1 5.3 79 747-853 283-368 (369)
402 PRK07582 cystathionine gamma-l 69.6 25 0.00054 39.8 9.7 118 689-851 235-365 (366)
403 cd00609 AAT_like Aspartate ami 69.3 28 0.0006 37.3 9.5 95 700-850 255-349 (350)
404 COG3033 TnaA Tryptophanase [Am 67.9 46 0.00099 38.7 11.0 202 150-382 46-284 (471)
405 PRK06108 aspartate aminotransf 67.4 29 0.00063 38.5 9.5 96 703-853 285-380 (382)
406 PRK04870 histidinol-phosphate 66.8 45 0.00097 36.9 10.8 91 702-853 266-356 (356)
407 PLN02483 serine palmitoyltrans 66.4 27 0.00058 41.3 9.4 94 707-855 372-466 (489)
408 PLN02974 adenosylmethionine-8- 65.7 1.9E+02 0.0042 36.9 17.0 83 302-386 585-676 (817)
409 PRK06225 aspartate aminotransf 65.2 34 0.00073 38.3 9.5 97 705-854 279-375 (380)
410 TIGR03799 NOD_PanD_pyr putativ 64.8 42 0.00092 40.3 10.7 52 692-758 388-439 (522)
411 PRK13034 serine hydroxymethylt 63.6 35 0.00076 39.4 9.5 105 701-854 283-391 (416)
412 KOG0633 Histidinol phosphate a 62.9 27 0.00059 38.9 7.8 113 211-338 83-199 (375)
413 TIGR03588 PseC UDP-4-keto-6-de 62.8 36 0.00079 38.2 9.3 118 702-853 257-380 (380)
414 PRK06939 2-amino-3-ketobutyrat 61.5 50 0.0011 36.7 10.0 96 703-853 296-391 (397)
415 TIGR01885 Orn_aminotrans ornit 60.4 41 0.00089 38.1 9.2 106 690-854 296-401 (401)
416 KOG2040 Glycine dehydrogenase 59.2 50 0.0011 40.8 9.7 159 198-382 164-329 (1001)
417 PLN02822 serine palmitoyltrans 58.0 75 0.0016 37.6 11.1 113 693-854 359-476 (481)
418 PRK03244 argD acetylornithine 57.7 92 0.002 35.1 11.3 96 698-853 297-392 (398)
419 TIGR01825 gly_Cac_T_rel pyrido 56.8 54 0.0012 36.5 9.2 95 704-853 285-379 (385)
420 PRK00011 glyA serine hydroxyme 56.8 75 0.0016 36.1 10.5 106 700-854 279-388 (416)
421 PRK06460 hypothetical protein; 56.2 17 0.00037 41.3 5.2 25 826-854 349-373 (376)
422 TIGR01365 serC_2 phosphoserine 56.1 94 0.002 35.9 11.1 83 692-786 250-341 (374)
423 cd00610 OAT_like Acetyl ornith 55.6 54 0.0012 36.8 9.0 104 692-852 304-412 (413)
424 cd00378 SHMT Serine-glycine hy 55.1 81 0.0018 35.4 10.3 114 694-857 269-387 (402)
425 PRK06084 O-acetylhomoserine am 53.3 44 0.00095 38.9 8.0 121 689-854 279-421 (425)
426 COG1932 SerC Phosphoserine ami 51.8 82 0.0018 36.5 9.5 105 693-854 255-362 (365)
427 TIGR01328 met_gam_lyase methio 51.7 23 0.0005 40.5 5.4 132 689-853 248-388 (391)
428 PRK01688 histidinol-phosphate 51.6 1.1E+02 0.0023 34.2 10.5 19 828-849 332-350 (351)
429 TIGR02080 O_succ_thio_ly O-suc 50.8 28 0.0006 39.8 5.8 123 689-854 239-380 (382)
430 TIGR02539 SepCysS Sep-tRNA:Cys 50.2 96 0.0021 34.8 9.9 84 713-853 277-366 (370)
431 PRK04073 rocD ornithine--oxo-a 49.7 1.3E+02 0.0028 34.2 10.9 98 692-853 298-395 (396)
432 PRK08861 cystathionine gamma-s 49.5 56 0.0012 37.7 8.0 122 689-853 241-381 (388)
433 PLN02509 cystathionine beta-ly 49.4 28 0.00061 41.2 5.7 27 826-856 436-462 (464)
434 PRK05387 histidinol-phosphate 48.4 1.2E+02 0.0027 33.2 10.3 89 703-853 263-351 (353)
435 PRK00950 histidinol-phosphate 47.9 1.3E+02 0.0028 33.2 10.3 24 827-853 337-360 (361)
436 PRK07671 cystathionine beta-ly 46.8 81 0.0017 36.0 8.7 118 689-852 237-375 (377)
437 PRK05968 hypothetical protein; 46.5 65 0.0014 36.9 7.9 34 747-787 300-336 (389)
438 PRK05939 hypothetical protein; 46.2 91 0.002 36.0 9.1 120 689-854 255-395 (397)
439 COG3844 Kynureninase [Amino ac 45.8 1.1E+02 0.0023 35.5 9.1 106 693-854 295-401 (407)
440 PRK08133 O-succinylhomoserine 42.9 46 0.00099 38.1 6.0 123 689-854 248-389 (390)
441 PRK07049 methionine gamma-lyas 42.6 45 0.00097 38.8 6.0 133 689-854 282-425 (427)
442 KOG1412 Aspartate aminotransfe 41.8 1.5E+02 0.0033 34.1 9.4 142 222-378 105-267 (410)
443 PRK07811 cystathionine gamma-s 41.0 58 0.0013 37.2 6.5 24 826-853 363-386 (388)
444 cd06452 SepCysS Sep-tRNA:Cys-t 40.9 2.4E+02 0.0052 31.4 11.1 85 712-852 269-359 (361)
445 cd06502 TA_like Low-specificit 40.9 1.6E+02 0.0034 31.9 9.5 25 827-851 313-337 (338)
446 PRK08574 cystathionine gamma-s 40.9 1.1E+02 0.0024 35.0 8.7 24 826-853 359-382 (385)
447 KOG1402 Ornithine aminotransfe 40.6 75 0.0016 36.6 7.0 98 282-389 195-301 (427)
448 PF15608 PELOTA_1: PELOTA RNA 40.2 1E+02 0.0022 29.6 6.8 65 201-273 23-87 (100)
449 PRK05764 aspartate aminotransf 39.3 1.6E+02 0.0034 33.0 9.5 50 766-854 341-390 (393)
450 COG0626 MetC Cystathionine bet 37.8 1.5E+02 0.0032 34.8 9.1 119 690-854 254-393 (396)
451 PRK11658 UDP-4-amino-4-deoxy-L 37.4 1.6E+02 0.0035 33.4 9.2 130 692-853 243-377 (379)
452 PLN02590 probable tyrosine dec 36.8 2.4E+02 0.0052 34.3 10.9 103 701-852 425-529 (539)
453 PRK06767 methionine gamma-lyas 36.3 88 0.0019 35.7 6.9 25 825-853 359-383 (386)
454 PRK07812 O-acetylhomoserine am 35.7 38 0.00082 39.7 4.0 132 689-854 288-430 (436)
455 PRK08248 O-acetylhomoserine am 35.6 98 0.0021 36.2 7.3 121 689-854 284-426 (431)
456 PRK05613 O-acetylhomoserine am 34.3 1E+02 0.0022 36.2 7.2 121 689-854 293-435 (437)
457 PRK08249 cystathionine gamma-s 33.8 47 0.001 38.2 4.3 123 689-854 251-392 (398)
458 TIGR01325 O_suc_HS_sulf O-succ 33.6 77 0.0017 36.0 5.9 129 689-851 241-378 (380)
459 PRK06176 cystathionine gamma-s 33.2 65 0.0014 36.8 5.2 109 702-853 249-376 (380)
460 PRK05967 cystathionine beta-ly 32.9 77 0.0017 36.8 5.8 84 688-778 250-335 (395)
461 PF01053 Cys_Met_Meta_PP: Cys/ 32.9 26 0.00056 40.5 2.0 116 691-851 247-383 (386)
462 PRK07503 methionine gamma-lyas 32.8 67 0.0014 37.0 5.3 25 826-854 371-395 (403)
463 PRK08056 threonine-phosphate d 32.6 3.6E+02 0.0079 30.0 10.9 92 704-855 264-355 (356)
464 PRK08776 cystathionine gamma-s 32.5 2.3E+02 0.005 32.8 9.6 79 748-854 304-389 (405)
465 PLN03026 histidinol-phosphate 32.2 3.4E+02 0.0075 30.7 10.8 23 827-852 357-379 (380)
466 PRK05964 adenosylmethionine--8 32.1 4.2E+02 0.009 30.6 11.6 104 692-854 318-421 (423)
467 TIGR00707 argD acetylornithine 32.0 2.8E+02 0.0062 30.7 9.9 96 693-851 282-377 (379)
468 PRK00854 rocD ornithine--oxo-a 31.9 3E+02 0.0065 31.1 10.2 105 689-854 296-400 (401)
469 PRK09028 cystathionine beta-ly 31.5 2.4E+02 0.0052 32.8 9.5 74 689-782 248-334 (394)
470 PRK06702 O-acetylhomoserine am 30.6 1.9E+02 0.004 34.2 8.5 124 689-855 281-424 (432)
471 PRK06425 histidinol-phosphate 30.5 4.2E+02 0.0091 29.3 10.9 24 828-854 309-332 (332)
472 PRK09105 putative aminotransfe 30.4 2.6E+02 0.0056 31.6 9.4 86 703-853 282-368 (370)
473 PRK07504 O-succinylhomoserine 30.0 74 0.0016 36.6 5.0 25 826-854 370-394 (398)
474 PRK06234 methionine gamma-lyas 28.7 70 0.0015 36.7 4.6 25 826-854 372-396 (400)
475 PRK08363 alanine aminotransfer 28.5 3.7E+02 0.008 30.4 10.2 63 705-784 297-360 (398)
476 KOG1405 4-aminobutyrate aminot 27.2 1.4E+02 0.003 34.9 6.3 77 282-361 254-341 (484)
477 PRK03158 histidinol-phosphate 26.9 4.8E+02 0.01 28.9 10.6 23 828-853 337-359 (359)
478 PRK08361 aspartate aminotransf 25.2 4.5E+02 0.0096 29.7 10.1 65 702-785 291-357 (391)
479 PRK08114 cystathionine beta-ly 24.4 3.5E+02 0.0075 31.6 9.1 124 689-854 251-392 (395)
480 KOG1401 Acetylornithine aminot 24.2 1.2E+03 0.027 27.8 13.2 176 201-390 102-300 (433)
481 COG1740 HyaA Ni,Fe-hydrogenase 24.0 2.1E+02 0.0045 33.0 6.9 103 91-247 14-117 (355)
482 PTZ00125 ornithine aminotransf 23.1 3.6E+02 0.0078 30.3 8.8 108 689-854 287-394 (400)
483 PRK05957 aspartate aminotransf 22.7 4E+02 0.0086 30.1 9.1 21 766-786 332-352 (389)
484 PF00455 DeoRC: DeoR C termina 22.4 8.1E+02 0.018 24.7 10.5 109 218-343 21-142 (161)
485 PRK02627 acetylornithine amino 22.4 5.8E+02 0.013 28.5 10.3 92 704-854 302-393 (396)
486 PRK03715 argD acetylornithine 22.2 5.4E+02 0.012 29.6 10.1 101 692-854 289-392 (395)
487 PLN03227 serine palmitoyltrans 22.1 7.2E+02 0.016 28.5 11.1 115 703-854 261-381 (392)
488 PF02310 B12-binding: B12 bind 22.0 6.3E+02 0.014 23.3 9.2 91 253-360 15-110 (121)
489 cd02067 B12-binding B12 bindin 21.9 4.8E+02 0.01 24.4 8.1 90 256-362 17-110 (119)
490 PRK08045 cystathionine gamma-s 21.7 4.2E+02 0.0091 30.5 9.1 123 689-854 240-381 (386)
491 PF10518 TAT_signal: TAT (twin 21.4 59 0.0013 23.7 1.4 13 91-103 3-15 (26)
No 1
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=100.00 E-value=3.7e-96 Score=825.26 Aligned_cols=666 Identities=51% Similarity=0.724 Sum_probs=584.3
Q ss_pred CCCCccccccChhHHhHHHHHHHHHHHHHhcccCCCcccCCCCCCccccccCccchhhhHHHHHHHHHHHHHHhhhhccc
Q 002866 27 GSDSTVDIKRNPSILRKLEEHRLREALEEASEDGSLFKSQDIESEPLANQDESLGRSRSLARLHAQREFLRATALAAERV 106 (872)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~rr~f~~~~~~~~~~~ 106 (872)
|++|..+ +++....|++.++++|++++||+++|+++|+||++-. |++..+++||+|||++++++ ++.++..+.|.
T Consensus 7 gs~S~~~-r~~e~s~~~yldhag~tl~sesq~~g~~~~sq~~e~~---nphs~~~ts~~l~~~v~Q~r-~ril~~f~tta 81 (728)
T KOG2142|consen 7 GSSSPQS-RDREFSRLAYLDHAGRTLFSESQLEGVAFQSQSSENA---NPHSHLGTSRSLARLVAQVR-LRILALFNTTA 81 (728)
T ss_pred CCCCchh-hhHHHHHHHHHHhhhhhhhhhcccchhhhhhhccccC---CCcccccchHHHHHHHHHHH-HHHHHHhcccc
Confidence 7888888 6666667789999999999999999999999999988 69999999999999999999 89988889999
Q ss_pred ccCCCCCcchHHHHHHHHhhCCCCCCchhHHHHHhhcccCCCC---ceecccCCCCCCcHHHHHHhhhcccccHHHHHHh
Q 002866 107 FETEESIPDLSEAFSKFLTMYPKYQSSDKIDQLRANEYLHLSP---KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITAN 183 (872)
Q Consensus 107 f~~h~~lP~l~~a~~~FL~~~p~y~~t~~ID~lR~~EFP~L~~---~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~n 183 (872)
|+.++++|++.+|+..|+++||.|++++.+|.+|..+|.++.. .+++||.+.++++..+...++....|++.....+
T Consensus 82 ~dy~v~lp~~t~al~~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~i~~~~~~sls~~~~~ 161 (728)
T KOG2142|consen 82 FDYEVSLPALTEALKLVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNEISDSEEFSLSESEAN 161 (728)
T ss_pred ccccchhHHHHHHHHHHHHhCccccccccccchhhhhhcccccccceeeeeeeccceEEeeeeeeccccccccccccccC
Confidence 9999999999999999999999999999999999999999876 5899999999999877676776656777777777
Q ss_pred hccCcCcCCCchHHHHHH-HHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHH
Q 002866 184 LSNHALYGGAEKGTVEHD-IKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSA 262 (872)
Q Consensus 184 L~~~~~ygNpsS~~~iee-ARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~A 262 (872)
+..+.+|+.+.-...... ++.+++.+|+++.++|.++||++...|+.|++++||++-...+++.++||..+|+++.+.|
T Consensus 162 ls~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~lltiFgyetgAvlv~~r~A 241 (728)
T KOG2142|consen 162 LSEHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPKLLTIFGYETGAVLVMNRSA 241 (728)
T ss_pred cccchhcccchhcccccceeeeeeecccccCCceEEEEEeecccccccchHhhCCCcccchheeecCCCchhhHHHhhhh
Confidence 777778877654444444 8999999999999999999999999999999999999877779999999999999999999
Q ss_pred HHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCC
Q 002866 263 KEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGP 342 (872)
Q Consensus 263 krkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG 342 (872)
+.+|+++..+.+.||...++.++|++.+...+++.++...+|++|+.++++||.+++|.|+..+++++|+++||+.++++
T Consensus 242 ~~~Ggkt~sa~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~lG~ 321 (728)
T KOG2142|consen 242 ELKGGKTASAEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALALGP 321 (728)
T ss_pred HhhcCccceeecccchHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhhhccCc
Confidence 99999999999999999999999999998766667777899999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCcEEEEcccccCCCC-CCceEEEEEeCCCcccccCCCCCC-CCCeEEEeeCCCccccc----------
Q 002866 343 KDMDSLGLSLFRPDFIITSFYRVFGFD-PTGFGCLLIKKSVMGSLQNQSGQT-GSGMVKITPEYPLYLSD---------- 410 (872)
Q Consensus 343 ~~mipLDLs~l~~DFlv~S~HK~fG~~-PtGvG~LyVRk~~i~~L~P~~~~~-GgGtV~~vP~~~~~l~d---------- 410 (872)
++|..+.++.+.|||..+|+|+.||.+ |+|+|||.|+|..+..|+-.+..+ +.|+|++.|+. |+++
T Consensus 322 kdmd~yglS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~i~~l~lrtGcfcn~Gack~~pgl--~~~~~~~~~~~g~~ 399 (728)
T KOG2142|consen 322 KDMDSYGLSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSAISGLELRTGCFCNIGACKIYPGL--YLEMSQKGLSAGKG 399 (728)
T ss_pred chHhhhhhhccCccceeeeEEEEeccCCCCceeeeeeehhhhhceeccCCCCCCCcceeecccc--cHHHHHHHhhhccc
Confidence 999899999999999999999999987 999999999999998888777555 89999999942 2221
Q ss_pred -------------------------------ccccccccCCccCCCCCCCccccccCCCCCCCCcccccccccccCCCCC
Q 002866 411 -------------------------------SVDGLDRLAGVEDDESSDNSFWIDLGQSPLGSDNAGQLNKQKIASPLPP 459 (872)
Q Consensus 411 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (872)
.+..|||+|+|+|+++++|+ +++||+
T Consensus 400 cgD~dg~~~s~~~~~~~~~~a~~~~~v~~~~~T~~lm~~~~~se~e~~~n~----------------------~a~Pl~- 456 (728)
T KOG2142|consen 400 CGDNDGQPVSGYMQTPADVGAYLSAQVSDVLETDPLMKSPVFSEQEDSDNG----------------------IATPLL- 456 (728)
T ss_pred cccCCCCcccccccchhhhhHHHHHhhhhhhhccccccccccchhhhcccc----------------------ccCCcc-
Confidence 24469999999999999873 689999
Q ss_pred ccccCCCCCccCCCCCCccccCCCcccccccccCCCCCccccchhhhhhhcccccccccCCcchhhcccCcccccCCCCC
Q 002866 460 LWFSGKKNHKRLSPKPTWKIYGSPIFDDKEANLGASDDHHVLSFDAAVLSVSQDLDRVKEVPEEEQFSGMTHNFRNNNKS 539 (872)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (872)
.|++-+| +|||++.+++.+
T Consensus 457 ~~~~~~R-----------------------------------~~d~~~~s~~~~-------------------------- 475 (728)
T KOG2142|consen 457 ERVQLKR-----------------------------------HFDAAVASYPIK-------------------------- 475 (728)
T ss_pred hhhcccc-----------------------------------hhhhhhhhhhhh--------------------------
Confidence 8976665 478999887643
Q ss_pred CCCCCccccccCCccccCCCcccccccccCccCCCCCCCcccccccCCcccchhhhhhhhhhhhcccchhhhcccccCcc
Q 002866 540 SGCPRVEEIQEEPSISKDSTGFASNSVMNGSCLNNSSSSSQHHGLANGLTSEICSEVKESAIRRETEGEFRLLGRREGSR 619 (872)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (872)
.+++||++++...+ + -+...+-|..++|++|||+|||+||+|+|+|.+.
T Consensus 476 ---~~~~EI~~~~~~~~--------------------------g-l~~~~s~m~~~~~~~alr~etE~e~~Li~~~~~~- 524 (728)
T KOG2142|consen 476 ---CAAFEIEEENSGSQ--------------------------G-LKYDRSWMSVDMNGSALRQETESELCLIGPRIKV- 524 (728)
T ss_pred ---hceeEeeccCcccc--------------------------c-cccccccccccccccceeeecccceeeeccccch-
Confidence 47778888643221 1 1455677888999999999999999999988864
Q ss_pred ccCcccccccCCCCCCCcccccccchhhhhhcccccccccccccccCCCCCCCCCCCCCCCCCCCCCcceeechhhhhhh
Q 002866 620 YIGGRFFGLEDEHPSRGRRVSFSMEDNRKERLSHTMETGEVSVTSFDDEDYSSDGEYGDGQDWNRREPEIICRHLDHINM 699 (872)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~c~gLdh~d~ 699 (872)
.++++ ++ +||||. +.+++||+|..+.+|+ + +|+||||+|+
T Consensus 525 --------~~d~~-~~-~~vs~~----------~sl~~~~a~~~s~~d~------------------~--~c~~iDh~~~ 564 (728)
T KOG2142|consen 525 --------QEDEQ-SE-RRVSFP----------TSLEQGEASKCSSYDC------------------P--PCRGIDHVDS 564 (728)
T ss_pred --------hhhcc-cc-eeecch----------hhhhhhhhhhcccccC------------------c--cccccchhhh
Confidence 67778 66 999995 6789999999998887 1 2999999999
Q ss_pred hcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCe
Q 002866 700 LGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGIS 779 (872)
Q Consensus 700 lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~Is 779 (872)
+|++++++|.|+|+|||+.+|..+.|+.+. ..-++||+||||++++.||+.|+|||+|+.++++.|.+|+++|++++|+
T Consensus 565 lgln~t~~r~r~ll~wl~~sl~~~~~~~~~-~~~~nlvq~ygpk~~~erG~~~~fnl~d~~~~fr~p~IV~~lae~E~is 643 (728)
T KOG2142|consen 565 LGLNLTTNRGRELLNWLVQSLRNLQHSESS-STTVNLVQIYGPKTKYERGPAVAFNLFDLSKRFRAPIIVNKLAEREEIS 643 (728)
T ss_pred hhHHhhhhhhhhHHHHHHHhcccccccccc-cccccceeeecCccccccChhheeehhhhhccccchhhhcchhhhhccc
Confidence 999999999999999999999999998754 3578999999999999999999999999999999999999999999999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCC-CCccceeEEEEeccccCCHHHHHHHHHHHHHhcCcccc
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGK-GGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNPAFV 858 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~-~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~~f~ 858 (872)
++.+++.||.|.+ +.. .|.+ ..-|+..++ .+++++.||||+|||+||||||||+|.||++||||+||
T Consensus 644 l~~~~l~~iri~d-p~~--r~~d---------q~~~~r~~~~~~~~Rl~vvt~~lgfltnfedv~K~w~fv~~fl~pgf~ 711 (728)
T KOG2142|consen 644 LGELSLGHIRIQD-PCH--RDID---------QLLGQRRGRTNGESRLSVVTARLGFLTNFEDVYKLWEFVARFLDPGFV 711 (728)
T ss_pred ccceeeeeeEEec-Ccc--hhhh---------HHhhhhccccccceeEeeeeeehhhhhchHHHHHHHHHHHHhcChhhh
Confidence 9999999999988 322 1322 111222222 68889999999999999999999999999999999999
Q ss_pred ccCCCCccc
Q 002866 859 REGALPTVE 867 (872)
Q Consensus 859 ~~~~~~~~~ 867 (872)
+++.|++++
T Consensus 712 ~~~~~~~~~ 720 (728)
T KOG2142|consen 712 EKVELRTVE 720 (728)
T ss_pred hhccccchh
Confidence 999999993
No 2
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=1.4e-62 Score=588.55 Aligned_cols=439 Identities=26% Similarity=0.436 Sum_probs=331.2
Q ss_pred HHHHhhC-CCCCCc---hhHHHHHhhcccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch-
Q 002866 121 SKFLTMY-PKYQSS---DKIDQLRANEYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK- 195 (872)
Q Consensus 121 ~~FL~~~-p~y~~t---~~ID~lR~~EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS- 195 (872)
..||..| |.|.+. ..++.+|+.+||.|..+|||||||++|+++.+++++.+ .+.. ..++||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~R~~~fp~l~~~iYLD~Aatt~~~~~~V~~~~~-------~~~~-----~~~~np~s~ 69 (805)
T PLN02724 2 ESFLKEFGGYYGYPDGPKPIDELRATEFARLKGVVYLDHAGATLYSESQLEAALA-------DFSS-----NVYGNPHSQ 69 (805)
T ss_pred hhHHhhhcccCCcccchhhHHHHHHHHhhhcCCCEeEeCCCCCCCCHHHHHHHHH-------HHHh-----hccCCCCcC
Confidence 3566655 345553 35999998789999989999999999988766665322 1211 14566653
Q ss_pred -------HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 196 -------GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 196 -------~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.+.++++|++||+||||++++|.||||+|+|+|+|+|+++++|++|++||+..+ ||+++..|++.++++|++
T Consensus 70 ~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~-eH~svl~~~~~a~~~G~~ 148 (805)
T PLN02724 70 SDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLE-NHNSVLGIREYALEKGAA 148 (805)
T ss_pred cchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeec-cccchHHHHHHHHHcCCe
Confidence 368999999999999998888889999999999999999999999999887644 678888888889999999
Q ss_pred EEEEeccC-------CCCccCH--HHHHHHHhhh--hccCCCCCceEEEEeCccCcccchhcHHHHHHHHHC--------
Q 002866 269 VYSAWFKW-------PTLKLCS--TDLRKQISSK--KRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQN-------- 329 (872)
Q Consensus 269 V~~Vpvd~-------p~g~Id~--edLe~~I~~~--~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~-------- 329 (872)
|++++++. ..+.++. ++|++.+... .+...+++|+||+++|+||+||+++|+++|..+++.
T Consensus 149 v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~ 228 (805)
T PLN02724 149 AIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKS 228 (805)
T ss_pred EEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccC
Confidence 99999862 1233332 5566553210 000123467999999999999999999988776552
Q ss_pred -CcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccCCCCCCCCCeEEEeeCCCccc
Q 002866 330 -HWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQSGQTGSGMVKITPEYPLYL 408 (872)
Q Consensus 330 -G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~~~~~GgGtV~~vP~~~~~l 408 (872)
+|+|+|||||++|+ +++||++++|||+++|+|||||+ |+|+|+||||+++++.|.|.. .|||++...-....|.
T Consensus 229 g~~~v~vDaaQ~~g~--~piDv~~~~~Dfl~~S~HK~~Gg-P~G~G~L~vr~~~~~~l~p~~--~GGg~~~~~~~~~~~~ 303 (805)
T PLN02724 229 GRWMVLLDAAKGCGT--SPPDLSRYPADFVVVSFYKIFGY-PTGLGALLVRRDAAKLLKKKY--FGGGTVAASIADIDFV 303 (805)
T ss_pred cceEEEeehhhhcCC--CCCChhhcCCCEEEEecceeccC-CCCceEEEEehhhhhhhcCCc--cCCCceEEEeccccee
Confidence 48999999999998 79999999999999999999999 999999999999998898874 5666653211000000
Q ss_pred ccccccccccCCccCCCCCCCccccccCCCCCCCCcccccccccccCCCCCccccCCCCCccCCCCCCccccCCCccccc
Q 002866 409 SDSVDGLDRLAGVEDDESSDNSFWIDLGQSPLGSDNAGQLNKQKIASPLPPLWFSGKKNHKRLSPKPTWKIYGSPIFDDK 488 (872)
Q Consensus 409 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (872)
. . +++
T Consensus 304 -------------------------~-------------------------------------~------------~~~- 308 (805)
T PLN02724 304 -------------------------K-------------------------------------R------------RER- 308 (805)
T ss_pred -------------------------e-------------------------------------c------------ccc-
Confidence 0 0 000
Q ss_pred ccccCCCCCccccchhhhhhhcccccccccCCcchhhcccCcccccCCCCCCCCCCccccccCCccccCCCccccccccc
Q 002866 489 EANLGASDDHHVLSFDAAVLSVSQDLDRVKEVPEEEQFSGMTHNFRNNNKSSGCPRVEEIQEEPSISKDSTGFASNSVMN 568 (872)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (872)
-++-++.||++.. .+
T Consensus 309 ---------------------------------~~~rfE~GT~n~~---------~i----------------------- 323 (805)
T PLN02724 309 ---------------------------------VEQRFEDGTISFL---------SI----------------------- 323 (805)
T ss_pred ---------------------------------HHHHhcCCCcchh---------HH-----------------------
Confidence 0012222333310 00
Q ss_pred CccCCCCCCCcccccccCCcccchhhhhhhhhhhhcccchhhhcccccCccccCcccccccCCCCCCCcccccccchhhh
Q 002866 569 GSCLNNSSSSSQHHGLANGLTSEICSEVKESAIRRETEGEFRLLGRREGSRYIGGRFFGLEDEHPSRGRRVSFSMEDNRK 648 (872)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (872)
.|
T Consensus 324 ---------------------------------------------------------~~--------------------- 325 (805)
T PLN02724 324 ---------------------------------------------------------AA--------------------- 325 (805)
T ss_pred ---------------------------------------------------------HH---------------------
Confidence 00
Q ss_pred hhcccccccccccccccCCCCCCCCCCCCCCCCCCCCCcceeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCC
Q 002866 649 ERLSHTMETGEVSVTSFDDEDYSSDGEYGDGQDWNRREPEIICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDS 728 (872)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~ 728 (872)
+ -.+|++++.+|++.|..|++.|++||++.|.+|+|
T Consensus 326 ----------------------------------------l-~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~--- 361 (805)
T PLN02724 326 ----------------------------------------L-RHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKH--- 361 (805)
T ss_pred ----------------------------------------H-HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccC---
Confidence 0 02799999999999999999999999999999999
Q ss_pred CCCCCceEEEEeCCCC----CccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeecccccccccC------------
Q 002866 729 DGESRAHLVHIYGPKI----KYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIGFLSHIRILD------------ 792 (872)
Q Consensus 729 ~~~ng~~LV~IYGp~~----~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G~l~~i~~~d------------ 792 (872)
.||.|.|+||||.. ...|||||+|||.+.+|..|+|..|++||+.+||.+|+|++|++.+..
T Consensus 362 --~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~ 439 (805)
T PLN02724 362 --GNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQA 439 (805)
T ss_pred --CCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHH
Confidence 57999999999862 257999999999999999999999999999999999999999964221
Q ss_pred CcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH-hcCc
Q 002866 793 SPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK-FLNP 855 (872)
Q Consensus 793 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~-Fld~ 855 (872)
.+.+ |.. |.+..+.+.|++ .|+||||||+|||+|||++|++||.+ |++.
T Consensus 440 ~~~~--~~~----c~~~~~~~~~~~--------~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~ 489 (805)
T PLN02724 440 NFEA--GHV----CWDDQDVIHGRP--------TGAVRVSFGYMSTFEDCQKFIDFIISSFVST 489 (805)
T ss_pred Hhhc--CCc----cCchhheecCcc--------cceEEEEcCccCCHHHHHHHHHHHHHHhhcC
Confidence 1111 211 233333444443 68999999999999999999999999 5444
No 3
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-56 Score=497.45 Aligned_cols=382 Identities=24% Similarity=0.288 Sum_probs=306.3
Q ss_pred hHHHHHhhcccCCCC-----ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc---------hHHHHH
Q 002866 135 KIDQLRANEYLHLSP-----KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE---------KGTVEH 200 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~-----~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps---------S~~~ie 200 (872)
++..+|+ +||.|.+ ++|||++|+++.|..|++++.+ | +. . .++|++ ..+.++
T Consensus 4 ~~~~~r~-~fp~l~~~~~~~~vylD~aa~~~~p~~V~~a~~~---~----~~-~-----~~an~~r~~~~~~~~~t~~~e 69 (405)
T COG0520 4 DVAAVRA-DFPALKREVGKPLVYLDNAATSQKPQAVLDAVAE---Y----YR-R-----YNANVHRGAHTLAEEATDLYE 69 (405)
T ss_pred ChHHHHh-hCHHHhhccCCCeEEecCcccccCCHHHHHHHHH---H----HH-h-----hcCCcCcccchHHHHHHHHHH
Confidence 4666886 6998876 5899999999999999998654 1 11 1 233433 236899
Q ss_pred HHHHHHHHhcCCCC-CCCcEEEeCCHHHHHHHHHhhCC--CCCCCeEEEe-cccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 201 DIKTRIMDHLNIPE-NEYGLVFTVSRGSAFKLLAESYP--FHTNKKLLTM-FDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 201 eARerIA~lLgA~~-dEY~VVFTsnATeALnLVaeslp--f~~Gd~ILT~-~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
++|+.||+|+|+++ + +||||+|+|+|+|+++.+|. +++||+||++ .|| |..+.+|.+.+++.|++|+++|++
T Consensus 70 ~aRe~va~~~~a~~~~--eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH-~sn~~pw~~~~~~~Ga~v~~i~~~- 145 (405)
T COG0520 70 AAREAVARFLNADSSD--EIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEH-HSNIVPWQELAKRTGAKVRVIPLD- 145 (405)
T ss_pred HHHHHHHHHhCCCCCC--eEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcc-hhhHHHHHHHHHhcCcEEEEEecC-
Confidence 99999999999996 4 59999999999999999997 8899997755 454 344678899999999999999998
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
+++.++.++++.++. ++|+||+++|+||+||+++|++ ++++||++|++|+|||+|++|+ +++|+++++|
T Consensus 146 ~~g~~~~~~~~~~i~--------~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h--~~idv~~l~~ 215 (405)
T COG0520 146 DDGLLDLDALEKLIT--------PKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGH--LPIDVQELGC 215 (405)
T ss_pred CCCCcCHHHHHHhcC--------CCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCc--cCCCchhcCC
Confidence 578999999988664 4699999999999999999997 5678899999999999999998 7999999999
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCcccccCCCCCCCCCeEEEeeCCCcccccccccccccCCccCCCCCCCcccccc
Q 002866 356 DFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQSGQTGSGMVKITPEYPLYLSDSVDGLDRLAGVEDDESSDNSFWIDL 435 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~~~~~GgGtV~~vP~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (872)
||++||+|||+++ |+|+|+||+|++.++.|.|. ..||||+..+....++.
T Consensus 216 Df~afsgHKwl~g-P~GiGvLy~r~~~l~~l~P~--~~gg~~~~~~~~~~~~~--------------------------- 265 (405)
T COG0520 216 DFLAFSGHKWLLG-PTGIGVLYVRKELLEELEPF--LGGGGMIEYVSRDEGVT--------------------------- 265 (405)
T ss_pred CEEEEcccccccC-CCceEEEEEchHHHhhcCCc--ccCCCceeeeccccccc---------------------------
Confidence 9999999998777 99999999999999999775 47778874422110000
Q ss_pred CCCCCCCCcccccccccccCCCCCccccCCCCCccCCCCCCccccCCCcccccccccCCCCCccccchhhhhhhcccccc
Q 002866 436 GQSPLGSDNAGQLNKQKIASPLPPLWFSGKKNHKRLSPKPTWKIYGSPIFDDKEANLGASDDHHVLSFDAAVLSVSQDLD 515 (872)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (872)
|.+
T Consensus 266 -------------------------------------------------~~~---------------------------- 268 (405)
T COG0520 266 -------------------------------------------------LAE---------------------------- 268 (405)
T ss_pred -------------------------------------------------ccC----------------------------
Confidence 000
Q ss_pred cccCCcchhhcccCcccccCCCCCCCCCCccccccCCccccCCCcccccccccCccCCCCCCCcccccccCCcccchhhh
Q 002866 516 RVKEVPEEEQFSGMTHNFRNNNKSSGCPRVEEIQEEPSISKDSTGFASNSVMNGSCLNNSSSSSQHHGLANGLTSEICSE 595 (872)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (872)
...-|+-+|++ |...
T Consensus 269 ------~p~rfe~gTpn-----------------------------------------------------------~~~~ 283 (405)
T COG0520 269 ------LPLRFEAGTPN-----------------------------------------------------------IAGA 283 (405)
T ss_pred ------cchhhccCCch-----------------------------------------------------------HHHH
Confidence 00001111111 1000
Q ss_pred hhhhhhhhcccchhhhcccccCccccCcccccccCCCCCCCcccccccchhhhhhcccccccccccccccCCCCCCCCCC
Q 002866 596 VKESAIRRETEGEFRLLGRREGSRYIGGRFFGLEDEHPSRGRRVSFSMEDNRKERLSHTMETGEVSVTSFDDEDYSSDGE 675 (872)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (872)
.|
T Consensus 284 ------------------------------i~------------------------------------------------ 285 (405)
T COG0520 284 ------------------------------IG------------------------------------------------ 285 (405)
T ss_pred ------------------------------Hh------------------------------------------------
Confidence 00
Q ss_pred CCCCCCCCCCCcceeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEE
Q 002866 676 YGDGQDWNRREPEIICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFN 755 (872)
Q Consensus 676 ~~~~~~~~~~~~~i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFN 755 (872)
-..+|++++.+|+..|.+|++.|+.|+++.|..+.. |+||||.. ..|+++|+||
T Consensus 286 --------------l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~-----------v~i~g~~~-~~r~~~vsF~ 339 (405)
T COG0520 286 --------------LAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPG-----------VEIYGPPD-ADRGGIVSFN 339 (405)
T ss_pred --------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCC-----------eEEecCCc-ccCceEEEEE
Confidence 013799999999999999999999999999999997 99999988 8999999999
Q ss_pred eccCCCCccChHHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccc
Q 002866 756 VRDKERGLINPEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGF 835 (872)
Q Consensus 756 v~d~~G~~v~p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~ 835 (872)
+.+ ++|+.|.+.++.+||.+|+|++|.....+.. |. .++|||||++
T Consensus 340 v~~-----~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~--------------------~~---------~~~iR~S~~~ 385 (405)
T COG0520 340 VKG-----IHPHDVATLLDEKGIAVRAGHHCAQPLHRLL--------------------GV---------DATIRASLHL 385 (405)
T ss_pred eCC-----CCHHHHHHHHHhCCeEEEeccccccHHHHhc--------------------CC---------CCceEEEEee
Confidence 999 9999999999999999999999974321111 01 2349999999
Q ss_pred cCCHHHHHHHHHHHHHhcC
Q 002866 836 LTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 836 lSnFEDVyrl~~Fva~Fld 854 (872)
|||+|||++|++.|++++.
T Consensus 386 YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 386 YNTEEDVDRLLEALKKALA 404 (405)
T ss_pred cCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999754
No 4
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=7.3e-43 Score=385.65 Aligned_cols=225 Identities=18% Similarity=0.220 Sum_probs=187.0
Q ss_pred hHHHHHhhcccCCCC------ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc---------hHHHH
Q 002866 135 KIDQLRANEYLHLSP------KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE---------KGTVE 199 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~------~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps---------S~~~i 199 (872)
+++.+|. +||.+++ +||||||+++|+|+.|++++.+ ++. . .++|++ ..+.+
T Consensus 4 ~~~~~r~-~fp~~~~~~~~~~~iYld~a~~~~~~~~v~~a~~~-------~~~-~-----~~~~~~~~~~~~~~~~~~~~ 69 (406)
T PRK09295 4 SVEKVRA-DFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAE-------FYR-H-----GYAAVHRGIHTLSAQATEKM 69 (406)
T ss_pred ChHHHHh-hCccccCcCCCCceEEEeCcccccCCHHHHHHHHH-------HHH-h-----cCCCCCCcccHHHHHHHHHH
Confidence 4678897 7999973 7999999999999999998543 111 1 223332 23678
Q ss_pred HHHHHHHHHhcCC-CCCCCcEEEeCCHHHHHHHHHhhC---CCCCCCeEEEecccCchh-HHHHHHHHHHcCcEEEEEec
Q 002866 200 HDIKTRIMDHLNI-PENEYGLVFTVSRGSAFKLLAESY---PFHTNKKLLTMFDYESQS-VNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 200 eeARerIA~lLgA-~~dEY~VVFTsnATeALnLVaesl---pf~~Gd~ILT~~DhEHnS-Vl~~~~~AkrkGaeV~~Vpv 274 (872)
+++|++||+++|+ +++ +|+||+|+|+|+++++.++ .+++|++||+. +.+|++ +..|...+++.|++++.+++
T Consensus 70 ~~~r~~la~~~~~~~~~--~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~-~~~~~s~~~~~~~~~~~~g~~v~~v~~ 146 (406)
T PRK09295 70 ENVRKQAALFINARSAE--ELVFVRGTTEGINLVANSWGNSNVRAGDNIIIS-EMEHHANIVPWQMLCARVGAELRVIPL 146 (406)
T ss_pred HHHHHHHHHHcCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEEC-cchhhHHHHHHHHHHHHcCcEEEEEec
Confidence 9999999999998 444 6999999999999999987 46789998766 334544 45677778889999999998
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCC
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLF 353 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l 353 (872)
+. ++.++.++|++++.. +|+||++++++|.||+++|++ +++.||++|+++++|++|++|+ .++|+..+
T Consensus 147 ~~-~~~~d~~~l~~~i~~--------~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~--~~~~~~~~ 215 (406)
T PRK09295 147 NP-DGTLQLETLPALFDE--------RTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMH--HPVDVQAL 215 (406)
T ss_pred CC-CCCCCHHHHHHhcCC--------CcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCc--cccCchhc
Confidence 75 577899999888753 589999999999999999997 5678899999999999999997 69999999
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 354 RPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 354 ~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
++||+++|+||++| |.|+|+||++++.++.++|.
T Consensus 216 ~~D~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~ 249 (406)
T PRK09295 216 DCDFYVFSGHKLYG--PTGIGILYVKEALLQEMPPW 249 (406)
T ss_pred CCCEEEeehhhccC--CCCcEEEEEchHhHhhCCCc
Confidence 99999999999887 88999999999988888653
No 5
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=7.9e-42 Score=372.32 Aligned_cols=212 Identities=21% Similarity=0.254 Sum_probs=175.6
Q ss_pred eecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc---------hHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 151 VCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE---------KGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 151 IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps---------S~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
|||||+|++++|+.|++++.+ +..+ .++||+ ..+.++++|+.||+++|++++ ++|+|
T Consensus 1 iYld~~~~~~~p~~v~~a~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~-~~v~~ 66 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISD--------YLRN-----FYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD-EEVVF 66 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHH--------HHHH-----SGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT-EEEEE
T ss_pred CEeeCCCccCCCHHHHHHHHH--------HHHH-----hhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc-ccccc
Confidence 799999999999999998643 1111 234441 247889999999999999873 47999
Q ss_pred eCCHHHHHHHHHhhC--CCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCC
Q 002866 222 TVSRGSAFKLLAESY--PFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 222 TsnATeALnLVaesl--pf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~ 298 (872)
|+|+|+|+++++.++ ++++|++|++.. .+|.+.. +|...+++.|++|++++++. ++.++.+++++.|..
T Consensus 67 ~~~~t~a~~~~~~~l~~~~~~g~~vl~~~-~~~~s~~~~~~~~~~~~g~~v~~i~~~~-~~~~~~~~~~~~l~~------ 138 (371)
T PF00266_consen 67 TSNGTEALNAVASSLLNPLKPGDEVLVTS-NEHPSNRYPWEEIAKRKGAEVRVIPADP-GGSLDLEDLEEALNP------ 138 (371)
T ss_dssp ESSHHHHHHHHHHHHHHHGTTTCEEEEEE-SSHHHHHHHHHHHHHHTTEEEEEEEEGT-TSSCSHHHHHHHHHT------
T ss_pred ccccchhhhhhhhcccccccccccccccc-ccccccccccccccccchhhhccccccc-cchhhhhhhhhhhcc------
Confidence 999999999999998 578999987653 4566665 56677778999999999986 578899999999963
Q ss_pred CCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEE
Q 002866 299 DSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLL 377 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~Ly 377 (872)
+++||+++|++|.||+++|++.| +.||++|++++|||+|++|. +++|++++++||+++|+|| |++ |.|+|+||
T Consensus 139 --~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~--~~id~~~~~~D~~~~s~~K-l~g-p~G~g~l~ 212 (371)
T PF00266_consen 139 --DTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGC--VPIDLDELGADFLVFSSHK-LGG-PPGLGFLY 212 (371)
T ss_dssp --TESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTT--SS--TTTTTESEEEEESTS-TTS-SSTEEEEE
T ss_pred --ccceEEeecccccccEEeeeceehhhhhccCCceeEechhcccc--ccccccccccceeeecccc-cCC-CCchhhhe
Confidence 59999999999999999999855 57899999999999999998 7999999999999999999 555 89999999
Q ss_pred EeCCCcccccCCC
Q 002866 378 IKKSVMGSLQNQS 390 (872)
Q Consensus 378 VRk~~i~~L~P~~ 390 (872)
|+++.++.++|..
T Consensus 213 v~~~~~~~~~p~~ 225 (371)
T PF00266_consen 213 VRPEAIERLRPAK 225 (371)
T ss_dssp EEHHHHHHHHTSS
T ss_pred ehhhhhhcccccc
Confidence 9999999887753
No 6
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-41 Score=369.26 Aligned_cols=204 Identities=15% Similarity=0.149 Sum_probs=179.9
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch--------HHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK--------GTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS--------~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+|||||+||+|+.+.|+++++. ++. ..||||+| ...+++||++||+++|++++ +|+|
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~-------~~~------~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~--eIiF 66 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLP-------YLT------EVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPE--EIIF 66 (386)
T ss_pred cccccccccCCCCHHHHHHHHH-------HHH------hhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCC--eEEE
Confidence 7999999999999999998643 122 24899986 26899999999999999985 5999
Q ss_pred eCCHHHHHHHHHhh--CCCC---CCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhcc
Q 002866 222 TVSRGSAFKLLAES--YPFH---TNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRR 296 (872)
Q Consensus 222 TsnATeALnLVaes--lpf~---~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr 296 (872)
|+|+||+.|+++.+ +.++ .|.+|+|+ ..||.+|+...++++++|++|+++|++. +|.+++++|+++|++
T Consensus 67 TSG~TEsnNlaI~g~~~a~~~~~~~~HIIts-~iEH~aVl~~~~~Le~~g~~Vtyl~V~~-~G~v~~e~L~~al~~---- 140 (386)
T COG1104 67 TSGATESNNLAIKGAALAYRNAQKGKHIITS-AIEHPAVLNTCRYLERQGFEVTYLPVDS-NGLVDLEQLEEALRP---- 140 (386)
T ss_pred ecCCcHHHHHHHHhhHHhhhcccCCCeEEEc-ccccHHHHHHHHHHHhcCCeEEEeCCCC-CCeEcHHHHHHhcCC----
Confidence 99999999999988 4443 47788877 4688999877777788899999999998 799999999999964
Q ss_pred CCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEE
Q 002866 297 KKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGC 375 (872)
Q Consensus 297 ~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~ 375 (872)
+|.||+++|+||+||++|||+.| +.++++|+.+|+||+|++|+ +|+|+..+++|++++|+||++| |+|+|+
T Consensus 141 ----~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gk--ipi~~~~~~vD~ls~SaHK~~G--pkGiGa 212 (386)
T COG1104 141 ----DTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGK--IPIDLEELGVDLLSFSAHKFGG--PKGIGA 212 (386)
T ss_pred ----CceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCc--eeccccccCcceEEeehhhccC--CCceEE
Confidence 59999999999999999999865 56799999999999999998 9999999999999999999888 999999
Q ss_pred EEEeCCC
Q 002866 376 LLIKKSV 382 (872)
Q Consensus 376 LyVRk~~ 382 (872)
||+|+..
T Consensus 213 Lyv~~~~ 219 (386)
T COG1104 213 LYVRPGV 219 (386)
T ss_pred EEECCCC
Confidence 9997765
No 7
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=1.4e-40 Score=369.74 Aligned_cols=223 Identities=18% Similarity=0.180 Sum_probs=182.3
Q ss_pred HHHhhcccCCCC------ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCC----c-----hHHHHHHH
Q 002866 138 QLRANEYLHLSP------KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGA----E-----KGTVEHDI 202 (872)
Q Consensus 138 ~lR~~EFP~L~~------~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNp----s-----S~~~ieeA 202 (872)
.+|. +||.+++ ++||||+++++.|+.|++++.+ ++ .. .++|+ + ..+.++++
T Consensus 16 ~~r~-~fp~~~~~~~~~~~iyLd~a~~~~~p~~v~~a~~~-------~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~ 81 (424)
T PLN02855 16 ETRP-DFPILDQTVNGSKLVYLDNAATSQKPAAVLDALQD-------YY-EE-----YNSNVHRGIHALSAKATDAYELA 81 (424)
T ss_pred HHHH-hCchhccccCCCCeEEeeCccccCCCHHHHHHHHH-------HH-Hh-----cCCCCCCccchHHHHHHHHHHHH
Confidence 3564 7999863 7999999999999999998543 12 11 12222 1 13567899
Q ss_pred HHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC---CCCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccCCC
Q 002866 203 KTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY---PFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKWPT 278 (872)
Q Consensus 203 RerIA~lLgA~~dEY~VVFTsnATeALnLVaesl---pf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~p~ 278 (872)
|+.||+++|+++. ++|+||+|+|+|+++++.++ .+++|++||+.. .+|++. ..|...+++.|++++.++++..
T Consensus 82 r~~la~~~~~~~~-~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~-~~~~s~~~~~~~~a~~~g~~v~~v~~~~~- 158 (424)
T PLN02855 82 RKKVAAFINASTS-REIVFTRNATEAINLVAYTWGLANLKPGDEVILSV-AEHHSNIVPWQLVAQKTGAVLKFVGLTPD- 158 (424)
T ss_pred HHHHHHHcCCCCC-CEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECC-CccHHHHHHHHHHHHHcCCEEEEEecCCC-
Confidence 9999999999632 36999999999999999886 467899988763 356654 4677778889999999999753
Q ss_pred CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcE
Q 002866 279 LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDF 357 (872)
Q Consensus 279 g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DF 357 (872)
+.++.+++++.|.. +|+||++++++|.||+++|++ +++.||++|+++++|++|++|+ +++|+..+++||
T Consensus 159 ~~~~~~~l~~~i~~--------~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~--~~~~~~~~~~d~ 228 (424)
T PLN02855 159 EVLDVEQLKELLSE--------KTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPH--MPVDVQTLGADF 228 (424)
T ss_pred CCcCHHHHHHHhcc--------CceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCC--cCCCchhcCCCE
Confidence 56889999988853 589999999999999999997 4577899999999999999997 689999999999
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 358 IITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 358 lv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
+++|+||++| |.|+|+||++++.++.++|.
T Consensus 229 ~~~s~~K~~g--p~G~G~l~~~~~~~~~~~p~ 258 (424)
T PLN02855 229 LVASSHKMCG--PTGIGFLWGKSDLLESMPPF 258 (424)
T ss_pred EEeecccccC--CCccEEEEEchhhhhcCCCE
Confidence 9999999877 88999999999998888654
No 8
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=7.3e-39 Score=352.15 Aligned_cols=225 Identities=20% Similarity=0.195 Sum_probs=186.6
Q ss_pred hHHHHHhhcccCCCC-ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc---------hHHHHHHHHH
Q 002866 135 KIDQLRANEYLHLSP-KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE---------KGTVEHDIKT 204 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~-~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps---------S~~~ieeARe 204 (872)
.++++|. +||.+++ +||||||+++|+|+.|++++.+ .+. . .++|++ ..+.++++|+
T Consensus 2 ~~~~~r~-~fp~l~~~~iyld~a~~~~~p~~v~~a~~~-------~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~r~ 67 (398)
T TIGR03392 2 NPAQFRQ-QFPALQDGTVYLDSAATALKPQAVIDATQQ-------FYR-L-----SSGTVHRSQHQQAQSLTARYELARQ 67 (398)
T ss_pred ChhHHHH-hCCccCCCeEEeeCccccCCCHHHHHHHHH-------HHH-h-----cCCCCCCcccHHHHHHHHHHHHHHH
Confidence 4677886 6998875 8999999999999999998643 111 1 224442 2357899999
Q ss_pred HHHHhcCCC-CCCCcEEEeCCHHHHHHHHHhhC---CCCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccCCCC
Q 002866 205 RIMDHLNIP-ENEYGLVFTVSRGSAFKLLAESY---PFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKWPTL 279 (872)
Q Consensus 205 rIA~lLgA~-~dEY~VVFTsnATeALnLVaesl---pf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~p~g 279 (872)
.||+++|++ ++ +|+||+|+|+|+++++.++ .+++|++||+. +.+|.+. ..|...+++.|++++.+|++. ++
T Consensus 68 ~la~~~g~~~~~--~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~-~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~ 143 (398)
T TIGR03392 68 QVARFLNAPDAE--NIVWTRGTTESINLVAQSYARPRLQPGDEIIVS-EAEHHANLIPWLMVAQQTGAKVVKLPIGA-DL 143 (398)
T ss_pred HHHHHhCCCCCC--eEEEeCChHHHHHHHHHHhhhccCCCCCEEEEC-CcchhHHHHHHHHHHHHcCcEEEEEecCC-CC
Confidence 999999995 44 5999999999999999998 47889998876 3455554 567777888999999999975 46
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEE
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFI 358 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFl 358 (872)
.++.++++++|.. +|+||++++++|.||.++|++. ++.||++|+++++|++|++|+ .++|+..+++||+
T Consensus 144 ~~~~~~l~~~i~~--------~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~--~~~~~~~~~~d~~ 213 (398)
T TIGR03392 144 LPDIRQLPELLTP--------RTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVH--GPPDVQALDIDFY 213 (398)
T ss_pred CcCHHHHHHHhcc--------CceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCC--CCCChhhcCCCEE
Confidence 7889999888853 5899999999999999999985 567899999999999999987 6899999999999
Q ss_pred EEcccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 359 ITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 359 v~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
++|+||+|| |.|+|+||++++.++.++|.
T Consensus 214 ~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~ 242 (398)
T TIGR03392 214 AFSGHKLYG--PTGIGVLYGKTELLEAMPPW 242 (398)
T ss_pred EEecccccC--CCceEEEEEcHHHHhhCCCe
Confidence 999999887 78999999999988888663
No 9
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.4e-38 Score=350.18 Aligned_cols=225 Identities=20% Similarity=0.205 Sum_probs=188.5
Q ss_pred hHHHHHhhcccCCCC-ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch---------HHHHHHHHH
Q 002866 135 KIDQLRANEYLHLSP-KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK---------GTVEHDIKT 204 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~-~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS---------~~~ieeARe 204 (872)
+++++|+ +||.+++ .+||||++++|.|+.|++++.+ +... .++|++. .+.++++|+
T Consensus 5 ~~~~~r~-~fp~l~~~~~yld~a~~~~~~~~v~~a~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~r~ 70 (401)
T PRK10874 5 NPAQFRA-QFPALQDAGVYLDSAATALKPQAVIEATQQ--------FYSL-----SAGNVHRSQFAAAQRLTARYEAARE 70 (401)
T ss_pred CHHHHHH-hCCCcCCceEEEeCCcccCCCHHHHHHHHH--------HHHh-----ccCCCCCcccHHHHHHHHHHHHHHH
Confidence 5788896 6998865 9999999999999999998643 1111 2344321 367899999
Q ss_pred HHHHhcCC-CCCCCcEEEeCCHHHHHHHHHhhC---CCCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccCCCC
Q 002866 205 RIMDHLNI-PENEYGLVFTVSRGSAFKLLAESY---PFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKWPTL 279 (872)
Q Consensus 205 rIA~lLgA-~~dEY~VVFTsnATeALnLVaesl---pf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~p~g 279 (872)
+||+++|+ +++ +|+||+|+|+++++++.++ .|++|++||+. +.+|.++ ..|...+++.|++++.+|++. ++
T Consensus 71 ~la~~~g~~~~~--~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~-~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~ 146 (401)
T PRK10874 71 QVAQLLNAPDAK--NIVWTRGTTESINLVAQSYARPRLQPGDEIIVS-EAEHHANLVPWLMVAQQTGAKVVKLPLGA-DR 146 (401)
T ss_pred HHHHHcCCCCCC--EEEEECCHHHHHHHHHHHhhhccCCCcCEEEEC-CcchHHHHHHHHHHHHHhCCEEEEEecCC-CC
Confidence 99999999 555 5999999999999999998 47899998876 3456664 567777888999999999975 56
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEE
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFI 358 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFl 358 (872)
.++.++++++|.. +|+||++++++|.||.++|++. +..|+++|+.+++|++|++|+ .++|+..+++||+
T Consensus 147 ~~d~~~l~~~i~~--------~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~--~~~~~~~~~~d~~ 216 (401)
T PRK10874 147 LPDVDLLPELITP--------RTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVH--FPADVQALDIDFY 216 (401)
T ss_pred cCCHHHHHHhcCc--------CcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccc--ccCCchhcCCCEE
Confidence 7889999888853 5899999999999999999985 567899999999999999987 6899999999999
Q ss_pred EEcccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 359 ITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 359 v~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
++|+||+|| |.|+|+||++++.++.+.|.
T Consensus 217 ~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~ 245 (401)
T PRK10874 217 AFSGHKLYG--PTGIGVLYGKSELLEAMSPW 245 (401)
T ss_pred EEecccccC--CCccEEEEEchHHHhcCCCe
Confidence 999999887 78999999999988888663
No 10
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-39 Score=355.47 Aligned_cols=218 Identities=17% Similarity=0.202 Sum_probs=187.9
Q ss_pred CceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchH-------HHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKG-------TVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~-------~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+.+|||+++++|++..|++++.+ ++. ..|+|||+. ..++++|+.||+|+||++.+ |||
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~-------~~~------~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~d--IiF 107 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLP-------YLL------EYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSD--IVF 107 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHH-------HHH------HhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCc--EEE
Confidence 48999999999999999998643 222 246888863 46899999999999999986 999
Q ss_pred eCCHHHHHHHHHhhCCCCCCC----eEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccC
Q 002866 222 TVSRGSAFKLLAESYPFHTNK----KLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRK 297 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd----~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~ 297 (872)
|+|||||+|+|+.+++|..++ +|||. +.||.+|..+.+.+++.|++|+++|+. .++.++.+++++.|..
T Consensus 108 ts~ATEs~Nlvl~~v~~~~~~~~~k~iitl-~~eH~~v~~s~~~l~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~----- 180 (428)
T KOG1549|consen 108 TSGATESNNLVLKGVARFFGDKTKKHIITL-QTEHPCVLDSCRALQEEGLEVTYLPVE-DSGLVDISKLREAIRS----- 180 (428)
T ss_pred eCCchHHHHHHHHHhhccccccccceEEEe-cccCcchhHHHHHHHhcCeEEEEeccC-ccccccHHHHHHhcCC-----
Confidence 999999999999999997776 77776 457899998888899999999999999 5788999999998863
Q ss_pred CCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 002866 298 KDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCL 376 (872)
Q Consensus 298 ~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~L 376 (872)
+|+||.+++++|++|+++|+++| .+|++.|++||+||||++|+ +++||.++++||+++|+||||| |+|+|+|
T Consensus 181 ---~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~--i~vDV~eln~D~~s~s~HK~yg--p~~iGaL 253 (428)
T KOG1549|consen 181 ---KTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGK--IPVDVQELNADFLSISAHKIYG--PPGIGAL 253 (428)
T ss_pred ---CceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCC--ccccHHHcCchheeeecccccC--CCcceEE
Confidence 69999999999999999999855 58899999999999999998 8999999999999999999999 7789999
Q ss_pred EEeC-CCcccccCCCCCCCCCe
Q 002866 377 LIKK-SVMGSLQNQSGQTGSGM 397 (872)
Q Consensus 377 yVRk-~~i~~L~P~~~~~GgGt 397 (872)
|||+ .-.-.+.|+. .|||.
T Consensus 254 Yvr~~~~~~~~~p~~--~GGgq 273 (428)
T KOG1549|consen 254 YVRRKRPRLRVEPPL--SGGGQ 273 (428)
T ss_pred EEccCCCcccccCcc--cCCcc
Confidence 9998 3333444553 44443
No 11
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=1.7e-37 Score=340.90 Aligned_cols=222 Identities=19% Similarity=0.218 Sum_probs=182.6
Q ss_pred HHHhhcccCCCC------ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch---------HHHHHHH
Q 002866 138 QLRANEYLHLSP------KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK---------GTVEHDI 202 (872)
Q Consensus 138 ~lR~~EFP~L~~------~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS---------~~~ieeA 202 (872)
++|+ +||.+++ .+|||||+++++|+.|++++.+ +.. ..++||++ ...++++
T Consensus 2 ~~~~-~f~~~~~~~~~~~~~yld~~~~~~~p~~v~~a~~~--------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 67 (403)
T TIGR01979 2 NIRA-DFPILKRKINGKPLVYLDSAATSQKPQQVIDAVAE--------YYR-----NSNANVHRGIHTLSVRATEAYEAV 67 (403)
T ss_pred chhh-hCchhcCCCCCCceEEEeCccccCCCHHHHHHHHH--------HHH-----hCCCCCCCCccHHHHHHHHHHHHH
Confidence 3565 6999974 5999999999999999987533 111 12445432 2468899
Q ss_pred HHHHHHhcCCC-CCCCcEEEeCCHHHHHHHHHhhCC---CCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccCC
Q 002866 203 KTRIMDHLNIP-ENEYGLVFTVSRGSAFKLLAESYP---FHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 203 RerIA~lLgA~-~dEY~VVFTsnATeALnLVaeslp---f~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~p 277 (872)
|+.||+++|++ ++ +|+||+|+|+|+++++.++. +++|++||+. +.+|.+. ..|...++..|++++.++++.
T Consensus 68 r~~ia~~~~~~~~~--~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~-~~~~~s~~~~~~~~~~~~g~~~~~v~~~~- 143 (403)
T TIGR01979 68 REKVAKFINAASDE--EIVFTRGTTESINLVAYSWGDSNLKAGDEIVIS-EMEHHANIVPWQLLAERTGATLKFIPLDD- 143 (403)
T ss_pred HHHHHHHhCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEEC-cchhhHHHHHHHHHHHhcCcEEEEEecCC-
Confidence 99999999998 44 59999999999999998873 5789998765 3455554 456677778899999999984
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCccCCCCCCCCc
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPD 356 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~D 356 (872)
++.++.+++++.+.. +|++|++++++|.||+++|++.| ..||++|+++++|++|++|+ .++|+..+++|
T Consensus 144 ~~~~~~~~l~~~i~~--------~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~--~~~~~~~~~~d 213 (403)
T TIGR01979 144 DGTLDLDDLEKLLTE--------KTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPH--MPVDVQALDCD 213 (403)
T ss_pred CCCCCHHHHHHHhcc--------CCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCc--cccCccccCCC
Confidence 578899999888853 58999999999999999999855 56899999999999999997 68999999999
Q ss_pred EEEEcccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 357 FIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 357 Flv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
|+++|+||+|| |.|+|+||++++.++.+.|.
T Consensus 214 ~~~~s~~K~~g--p~G~g~l~~~~~~~~~~~~~ 244 (403)
T TIGR01979 214 FYVFSGHKMYG--PTGIGVLYGKEELLEQMPPF 244 (403)
T ss_pred EEEEecccccC--CCCceEEEEchHHHhcCCCe
Confidence 99999999987 88999999999888777653
No 12
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=1.4e-37 Score=339.06 Aligned_cols=210 Identities=14% Similarity=0.116 Sum_probs=173.0
Q ss_pred eecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch---------HHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 151 VCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK---------GTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 151 IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS---------~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
|||||++++|+|+.|++++.+ ++. ..++||++ .+.++++|+.+++++|++++ .|+|
T Consensus 1 iYld~a~~~~~~~~v~~a~~~-------~~~------~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~v~~ 65 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLP-------FLI------EHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK--EIIF 65 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHH-------HHH------hCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEE
Confidence 699999999999999998543 111 13456543 35689999999999999876 5999
Q ss_pred eCCHHHHHHHHHhhC-C--CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCC
Q 002866 222 TVSRGSAFKLLAESY-P--FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 222 TsnATeALnLVaesl-p--f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~ 298 (872)
|+|+|+|+++++.++ . +++|++|++. +.+|+++......+++.|++++.+|+++ ++.++.++++++|..
T Consensus 66 t~~~t~a~~~~l~~~~~~~~~~g~~vl~~-~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~------ 137 (364)
T PLN02651 66 TSGATESNNLAIKGVMHFYKDKKKHVITT-QTEHKCVLDSCRHLQQEGFEVTYLPVKS-DGLVDLDELAAAIRP------ 137 (364)
T ss_pred eCCHHHHHHHHHHHHHHhccCCCCEEEEc-ccccHHHHHHHHHHHhcCCEEEEEccCC-CCcCCHHHHHHhcCC------
Confidence 999999999887664 2 3678888775 4467776433334457899999999975 578899999988853
Q ss_pred CCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEE
Q 002866 299 DSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLL 377 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~Ly 377 (872)
+|+||++++++|.||+++|++. .+.||++|++++||++|++|+ +++|+.++++||+++|+|||+| |.|+|+||
T Consensus 138 --~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~--~~~~~~~~~~D~~~~s~hK~~g--p~G~g~l~ 211 (364)
T PLN02651 138 --DTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGK--IPVDVDDLGVDLMSISGHKIYG--PKGVGALY 211 (364)
T ss_pred --CcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCC--cccCcccCCCCEEEechhhhCC--CCceEEEE
Confidence 5899999999999999999985 567899999999999999997 7999999999999999999855 89999999
Q ss_pred EeCCCcccccCC
Q 002866 378 IKKSVMGSLQNQ 389 (872)
Q Consensus 378 VRk~~i~~L~P~ 389 (872)
+|++....+.|.
T Consensus 212 v~~~~~~~l~p~ 223 (364)
T PLN02651 212 VRRRPRVRLEPL 223 (364)
T ss_pred EcCCCCCCCCcc
Confidence 999987777664
No 13
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=3.7e-36 Score=328.32 Aligned_cols=203 Identities=18% Similarity=0.174 Sum_probs=166.8
Q ss_pred eecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch--------HHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 151 VCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK--------GTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 151 IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS--------~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+||||+|++|+|+.|++++.+ ++.. .++||++ ...++++|+.+++++|++++ .|+||
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~-------~~~~------~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~i~~t 65 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLP-------YFTE------YFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD--EIIFT 65 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHH-------HHHh------cCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEe
Confidence 699999999999999998543 1211 2355432 35789999999999999876 59999
Q ss_pred CCHHHHHHHHHhhCC--CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCC
Q 002866 223 VSRGSAFKLLAESYP--FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 223 snATeALnLVaeslp--f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~ 300 (872)
+|+|+|+++++.++- +.+++.|++. +.+|+++..+.+.+++.|++++.+|+++ ++.++.++++++|..
T Consensus 66 ~~~t~a~~~al~~~~~~~~~~~~vv~~-~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~g~~~~~~l~~~i~~-------- 135 (379)
T TIGR03402 66 SGGTESDNTAIKSALAAQPEKRHIITT-AVEHPAVLSLCQHLEKQGYKVTYLPVDE-EGRLDLEELRAAITD-------- 135 (379)
T ss_pred CcHHHHHHHHHHHHHHhcCCCCeEEEc-ccccHHHHHHHHHHHHcCCEEEEEccCC-CCcCCHHHHHHhcCC--------
Confidence 999999999888752 3456777665 4466777555555666899999999875 577999999988853
Q ss_pred CceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 002866 301 AAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIK 379 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVR 379 (872)
+|++|++++++|.||+++|++. ...||++|+++++|++|++|+ .++|+...++||+++|+||++| |.|+|+||+|
T Consensus 136 ~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p~G~g~l~v~ 211 (379)
T TIGR03402 136 DTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGK--IPIDLKEMNIDMLSLSGHKLHG--PKGVGALYIR 211 (379)
T ss_pred CcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccc--cccCcccCCCCEEEEcHHHcCC--CCceEEEEEC
Confidence 5899999999999999999985 467899999999999999997 7999999999999999999766 8999999998
Q ss_pred CCC
Q 002866 380 KSV 382 (872)
Q Consensus 380 k~~ 382 (872)
++.
T Consensus 212 ~~~ 214 (379)
T TIGR03402 212 KGT 214 (379)
T ss_pred CCC
Confidence 864
No 14
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=2.4e-35 Score=322.62 Aligned_cols=203 Identities=16% Similarity=0.159 Sum_probs=167.7
Q ss_pred eecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch--------HHHHHHHHHHHHHhcCC-CCCCCcEEE
Q 002866 151 VCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK--------GTVEHDIKTRIMDHLNI-PENEYGLVF 221 (872)
Q Consensus 151 IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS--------~~~ieeARerIA~lLgA-~~dEY~VVF 221 (872)
|||||+|++|+++.|++++.+ +.. ..++||++ ...++++|+++++++|+ +++ +|+|
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~--------~~~-----~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~--~i~~ 65 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDP--------FFC-----DIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLD--DIII 65 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHH--------HHH-----hcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCC--eEEE
Confidence 699999999999999998543 111 13456653 25788999999999998 455 5999
Q ss_pred eCCHHHHHHHHHhhCCC----CCC-CeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhcc
Q 002866 222 TVSRGSAFKLLAESYPF----HTN-KKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRR 296 (872)
Q Consensus 222 TsnATeALnLVaeslpf----~~G-d~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr 296 (872)
|+|+|+|+++++.++.+ +++ ++|++. +.+|+++......++..|++++.+|++. ++.++.++|++++..
T Consensus 66 t~g~teal~~~~~~~~~~~~~~~~~~~vi~~-~~e~ps~~~~~~~~~~~G~~v~~v~~~~-~g~~d~~~l~~~i~~---- 139 (382)
T TIGR03403 66 TSCATESNNWVLKGVYFDEILKGGKNHIITT-EVEHPAVRATCAFLESLGVEVTYLPINE-QGTITAEQVREAITE---- 139 (382)
T ss_pred eCCHHHHHHHHHHHHHHhhcccCCCCEEEEc-CCccHHHHHHHHHHHHCCCEEEEEecCC-CCCCCHHHHHHhccc----
Confidence 99999999999998743 444 567665 4567777665566777899999999985 578899999888753
Q ss_pred CCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEE
Q 002866 297 KKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGC 375 (872)
Q Consensus 297 ~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~ 375 (872)
+|++|++++.+|.||+++|++. .+.|+++|+++++|++|.+|+ +++|+.+.++||+++|+|||+| |.|+|+
T Consensus 140 ----~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p~G~g~ 211 (382)
T TIGR03403 140 ----KTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGK--IPVDVQKAGVDFLSFSAHKFHG--PKGVGG 211 (382)
T ss_pred ----CCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCC--CccCccccCCCEEEEcchhhCC--CCceEE
Confidence 5899999999999999999985 567899999999999999997 6899999999999999999987 889999
Q ss_pred EEEeCCC
Q 002866 376 LLIKKSV 382 (872)
Q Consensus 376 LyVRk~~ 382 (872)
||||++.
T Consensus 212 l~vr~~~ 218 (382)
T TIGR03403 212 LYIRKGV 218 (382)
T ss_pred EEECCCC
Confidence 9999874
No 15
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=2.4e-34 Score=318.67 Aligned_cols=234 Identities=15% Similarity=0.124 Sum_probs=172.8
Q ss_pred hHHHHHhhcccCC-----CCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHh
Q 002866 135 KIDQLRANEYLHL-----SPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDH 209 (872)
Q Consensus 135 ~ID~lR~~EFP~L-----~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~l 209 (872)
.++.+|+ +||.+ +.++||||++++|.|+.+++++.+ | +..+...... ..+..+.....+.+.++++ ++
T Consensus 9 ~~~~~r~-~f~~~~~~~~~~~iyld~~a~g~~p~~v~~a~~~---~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~l 81 (406)
T TIGR01814 9 PLRALRD-EFHLPKIGDENAVIYLDGNSLGLMPKAARNALKE---E-LDKWAKIAIR-GHNTGKAPWFTLDESLLKL-RL 81 (406)
T ss_pred hHHHHHH-hcCCCcccCCCCcEEecCCCcCcCcHHHHHHHHH---H-HHHHHHhhhc-cCccCCCChhhhhhhhccc-cc
Confidence 5677886 69988 679999999999999999888643 1 1122211110 0111111112334454556 89
Q ss_pred cCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCC--C-eEEEecccCchhHHH-HHHHHHHcCcEE----EEEeccCCCCcc
Q 002866 210 LNIPENEYGLVFTVSRGSAFKLLAESYPFHTN--K-KLLTMFDYESQSVNW-MAQSAKEKGAKV----YSAWFKWPTLKL 281 (872)
Q Consensus 210 LgA~~dEY~VVFTsnATeALnLVaeslpf~~G--d-~ILT~~DhEHnSVl~-~~~~AkrkGaeV----~~Vpvd~p~g~I 281 (872)
+|+++++ |+||+|+|+++++++.++ ++++ + .|++. +.+|.++.. |...+++.|+++ +.++.++ .+.+
T Consensus 82 ~g~~~~~--v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~-~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~-~g~~ 156 (406)
T TIGR01814 82 VGAKEDE--VVVMNTLTINLHLLLASF-YKPTPKRYKILLE-AKAFPSDHYAIESQLQLHGLTVEESMVQIEPRE-EETL 156 (406)
T ss_pred cCCCCCc--EEEeCCchHHHHHHHHHh-cCCcCCccEEEec-CCCCChHHHHHHHHHHhcCCCcccceEEeccCC-CCcc
Confidence 9998774 999999999999999997 5543 2 45544 556777654 555677789987 4566553 4678
Q ss_pred CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEE
Q 002866 282 CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIIT 360 (872)
Q Consensus 282 d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~ 360 (872)
+.+++++.+.. .+++|+||+++|++|.||.++|++. .+.||++|++++||++|++|+ +++|+.+++|||+++
T Consensus 157 ~~~~l~~~~~~-----~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~--~~id~~~~gvD~~~~ 229 (406)
T TIGR01814 157 RLEDILDTIEK-----NGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGN--VPLDLHDWGVDFACW 229 (406)
T ss_pred CHHHHHHHHHh-----cCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCC--cccccccCCCCEEEE
Confidence 88999888853 2357999999999999999999985 567899999999999999998 799999999999999
Q ss_pred cccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 361 SFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 361 S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
|+|||+++ |.| |+||++++....+.|.
T Consensus 230 s~hK~l~g-~pG-~~l~v~~~~~~~~~p~ 256 (406)
T TIGR01814 230 CTYKYLNA-GPG-AGAFVHEKHAHTERPR 256 (406)
T ss_pred cCccccCC-CCC-eEEEEehhhhhhcCCC
Confidence 99999865 449 8899887766556554
No 16
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=6.9e-34 Score=314.63 Aligned_cols=210 Identities=14% Similarity=0.158 Sum_probs=172.5
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch---------HHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK---------GTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS---------~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
.+||||++++|+|+.|++++.+ ++.. .++||++ .+.++++|+.||+++|++++ .|+
T Consensus 4 ~~yld~aa~~~~~~~v~~a~~~-------~~~~------~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~v~ 68 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKMMP-------YLTE------KFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR--EIV 68 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHHHH-------HHHh------cCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC--eEE
Confidence 6999999999999999987532 1111 2455542 25688999999999999876 499
Q ss_pred EeCCHHHHHHHHHhhCC---CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccC
Q 002866 221 FTVSRGSAFKLLAESYP---FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRK 297 (872)
Q Consensus 221 FTsnATeALnLVaeslp---f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~ 297 (872)
||+|+|+|+++++.++. +++|++|++. +.+|.++......+++.|++++.+++++ ++.++.++|+++|..
T Consensus 69 ~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~-~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~----- 141 (402)
T TIGR02006 69 FTSGATESNNLAIKGIAHFYKSKGNHIITS-KTEHKAVLDTCRYLEREGFEVTYLPPKS-NGLIDLEELKAAIRD----- 141 (402)
T ss_pred EeCCHHHHHHHHHHHHHHhhcCCCCEEEEC-CCccHHHHHHHHHHHhcCCEEEEEccCC-CCcCCHHHHHHhcCC-----
Confidence 99999999999887753 4678888776 3467777644455567899999999885 578899999888753
Q ss_pred CCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 002866 298 KDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCL 376 (872)
Q Consensus 298 ~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~L 376 (872)
++++|++++++|+||+++|++. ...||++|+++++|++|++|+ +++|+..+++||+++|+||++| |.|+|+|
T Consensus 142 ---~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~--~~~~~~~~~~D~~~~s~~K~~g--p~G~G~l 214 (402)
T TIGR02006 142 ---DTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGK--IPINVNELKVDLMSISGHKIYG--PKGIGAL 214 (402)
T ss_pred ---CCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCC--cccCccccCCCEEEEehhhhcC--CCceEEE
Confidence 4899999999999999999985 567899999999999999997 6999999999999999999887 8999999
Q ss_pred EEeCCCcccccC
Q 002866 377 LIKKSVMGSLQN 388 (872)
Q Consensus 377 yVRk~~i~~L~P 388 (872)
|++++....+.|
T Consensus 215 ~~~~~~~~~~~~ 226 (402)
T TIGR02006 215 YVRRKPRVRLEA 226 (402)
T ss_pred EEccCCCCCCCc
Confidence 999876655544
No 17
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=4.3e-33 Score=305.22 Aligned_cols=229 Identities=21% Similarity=0.249 Sum_probs=181.6
Q ss_pred HHHHHhhcccCCCC--ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhcc-CcCcCCC-chHHHHHHHHHHHHHhcC
Q 002866 136 IDQLRANEYLHLSP--KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSN-HALYGGA-EKGTVEHDIKTRIMDHLN 211 (872)
Q Consensus 136 ID~lR~~EFP~L~~--~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~-~~~ygNp-sS~~~ieeARerIA~lLg 211 (872)
+.++|+ +||.+++ ++||||++++++|+.+++++.+ .+.....+ ...|... ...+.++++|+.|++++|
T Consensus 3 ~~~~r~-~f~~~~~~~~~yl~~~~~~~~p~~v~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~ 74 (397)
T TIGR01976 3 VEAVRG-QFPALADGDRVFFDNPAGTQIPQSVADAVSA-------ALTRSNANRGGAYESSRRADQVVDDAREAVADLLN 74 (397)
T ss_pred hhHHHh-hCCcCCCCCeEEecCCccCCCCHHHHHHHHH-------HHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC
Confidence 456786 7999864 6999999999999999988543 12111000 0011111 112568899999999999
Q ss_pred CCCCCCcEEEeCCHHHHHHHHHhhC--CCCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccCCCCccCHHHHHH
Q 002866 212 IPENEYGLVFTVSRGSAFKLLAESY--PFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRK 288 (872)
Q Consensus 212 A~~dEY~VVFTsnATeALnLVaesl--pf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~ 288 (872)
++++ .|+||+|+|++++++..++ .+++|++||+. +.+|.++ ..|...+++.|+++..++++.+++.++.+++++
T Consensus 75 ~~~~--~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~-~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 151 (397)
T TIGR01976 75 ADPP--EVVFGANATSLTFLLSRAISRRWGPGDEVIVT-RLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLAS 151 (397)
T ss_pred CCCC--eEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEc-CCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHH
Confidence 9865 4999999999999988887 57889998876 3456665 356667788999999999886567889999988
Q ss_pred HHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCC
Q 002866 289 QISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFG 367 (872)
Q Consensus 289 ~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG 367 (872)
+|.. +|++|++++++|.||.++|++.| ..||++|+++++|++|++|. .++|+.++++||+++|+|||||
T Consensus 152 ~i~~--------~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~--~~~~~~~~~~d~~~~s~~K~~g 221 (397)
T TIGR01976 152 LLSP--------RTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPH--GLIDVQATGADFLTCSAYKFFG 221 (397)
T ss_pred hcCC--------CceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccc--cCCCHHHcCCCEEEEechhhcC
Confidence 8852 58999999999999999999854 67899999999999999986 6889999999999999999998
Q ss_pred CCCCceEEEEEeCCCcccccC
Q 002866 368 FDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 368 ~~PtGvG~LyVRk~~i~~L~P 388 (872)
| ++|+||++++.++.+.+
T Consensus 222 --~-~~G~l~~~~~~~~~l~~ 239 (397)
T TIGR01976 222 --P-HMGILWGRPELLMNLPP 239 (397)
T ss_pred --C-ceEEEEEcHHHHhhCCC
Confidence 5 48999999988776654
No 18
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.6e-31 Score=292.13 Aligned_cols=204 Identities=18% Similarity=0.173 Sum_probs=168.5
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch--------HHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK--------GTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS--------~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++||||++++|+|+.|++++.+ .+.. .++||++ ...++++|+.+|+++|++++ .|+|
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~-------~~~~------~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~i~~ 65 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQK-------AASQ------YFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ--GIYF 65 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHH-------HHHh------cCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEE
Confidence 5899999999999999998643 1111 2345442 35789999999999999876 5999
Q ss_pred eCCHHHHHHHHHhhCC---CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCC
Q 002866 222 TVSRGSAFKLLAESYP---FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 222 TsnATeALnLVaeslp---f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~ 298 (872)
|+|+|+|+++++.++. .++|+.|++. ..+|.++......++..|++++.+++++ ++.++.++|++.+..
T Consensus 66 ~~g~t~a~~~~~~~~~~~~~~~g~~vv~~-~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~------ 137 (381)
T PRK02948 66 TSGGTESNYLAIQSLLNALPQNKKHIITT-PMEHASIHSYFQSLESQGYTVTEIPVDK-SGLIRLVDLERAITP------ 137 (381)
T ss_pred eCcHHHHHHHHHHHHHHhccCCCCEEEEC-CcccHHHHHHHHHHHhCCCEEEEEeeCC-CCCCCHHHHHHhcCC------
Confidence 9999999998877652 2567887765 4567777665566788899999999875 577899999887742
Q ss_pred CCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEE
Q 002866 299 DSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLL 377 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~Ly 377 (872)
+++||++++++|.||+++|++. .+.|+++|+++++|++|.+|+ +++|+.++++|++++|+||+|| |.|+|++|
T Consensus 138 --~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~--~~~~~~~~~~d~~~~s~~K~~g--p~G~G~l~ 211 (381)
T PRK02948 138 --DTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGK--LPIDVFEMGIDSLSVSAHKIYG--PKGVGAVY 211 (381)
T ss_pred --CCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccc--cccCcccCCCCEEEecHHhcCC--CCcEEEEE
Confidence 4789999999999999999985 467899999999999999997 6999999999999999999988 88999999
Q ss_pred EeCCC
Q 002866 378 IKKSV 382 (872)
Q Consensus 378 VRk~~ 382 (872)
++++.
T Consensus 212 ~~~~~ 216 (381)
T PRK02948 212 INPQV 216 (381)
T ss_pred EcCCC
Confidence 98763
No 19
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=8.5e-31 Score=289.93 Aligned_cols=212 Identities=16% Similarity=0.149 Sum_probs=171.7
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch---------HHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK---------GTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS---------~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
.|||||++++|+|+.|++++.+ ++.. ...++|+++ ...++++|+.+|+++|++++ .|+
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~--~v~ 70 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMP-------YLTM----DGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR--EIV 70 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHH-------HHHh----cccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC--eEE
Confidence 5899999999999999987533 1110 013456653 24688999999999999876 499
Q ss_pred EeCCHHHHHHHHHhhCC---CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccC
Q 002866 221 FTVSRGSAFKLLAESYP---FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRK 297 (872)
Q Consensus 221 FTsnATeALnLVaeslp---f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~ 297 (872)
||+|+|+|+++++.++. +.+|++|++. +.+|.++......+++.|++++.++++. ++.+++++|+++|..
T Consensus 71 ~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~-~~~~~s~~~~~~~~~~~g~~~~~v~~~~-~g~~d~~~l~~~i~~----- 143 (404)
T PRK14012 71 FTSGATESDNLAIKGAAHFYQKKGKHIITS-KTEHKAVLDTCRQLEREGFEVTYLDPQS-NGIIDLEKLEAAMRD----- 143 (404)
T ss_pred EeCCHHHHHHHHHHHHHHhhcCCCCEEEEe-cCccHHHHHHHHHHHhCCCEEEEEccCC-CCcCCHHHHHHhcCC-----
Confidence 99999999999887653 5789998876 4456666544444566899999999985 678899999988853
Q ss_pred CCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 002866 298 KDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCL 376 (872)
Q Consensus 298 ~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~L 376 (872)
+|++|++++++|+||.++|++. ...||++|+++++|++|++|. .++|+...++||+++|+||++| |.|+|+|
T Consensus 144 ---~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p~g~G~l 216 (404)
T PRK14012 144 ---DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGK--VPIDLSKLKVDLMSFSAHKIYG--PKGIGAL 216 (404)
T ss_pred ---CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCC--cccCcccCCCCEEEEehhhccC--CCceEEE
Confidence 5889999999999999999985 467899999999999999997 6889999999999999999887 7899999
Q ss_pred EEeCCCcccccC
Q 002866 377 LIKKSVMGSLQN 388 (872)
Q Consensus 377 yVRk~~i~~L~P 388 (872)
|++++....+.|
T Consensus 217 ~~~~~~~~~~~~ 228 (404)
T PRK14012 217 YVRRKPRVRLEA 228 (404)
T ss_pred EEecCCCCCCCc
Confidence 999876444433
No 20
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=1.9e-30 Score=281.51 Aligned_cols=209 Identities=16% Similarity=0.149 Sum_probs=165.7
Q ss_pred eecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCC-Cc---hHHHHHHHHHHHHHhcCCCCCCCcEEEeCCH
Q 002866 151 VCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGG-AE---KGTVEHDIKTRIMDHLNIPENEYGLVFTVSR 225 (872)
Q Consensus 151 IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygN-ps---S~~~ieeARerIA~lLgA~~dEY~VVFTsnA 225 (872)
+||||++++ |.|+.+++++.+ .+..+ .....++. +. ....+.++|+.|++++|+++. ..|+||+|+
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~v~~~~g~ 71 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMAD-------FYKNY-GGSPGRGRYRLALRASREVEETRQLLAKLFNAPSS-AHVVFTNNA 71 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHH-------HHHhc-CCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCC-CeEEEeCCH
Confidence 699999988 688888887532 12111 00001111 11 126788999999999999654 269999999
Q ss_pred HHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceE
Q 002866 226 GSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGL 304 (872)
Q Consensus 226 TeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~L 304 (872)
|+|+++++.++ +++|++|++.. .+|.++. .+...++..|++++.++++. ++.++.++|++++.. ++++
T Consensus 72 t~al~~~~~~~-~~~gd~vl~~~-~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~~~--------~~~~ 140 (376)
T TIGR01977 72 TTALNIALKGL-LKEGDHVITTP-MEHNSVARPLECLKEQIGVEITIVKCDN-EGLISPERIKRAIKT--------NTKL 140 (376)
T ss_pred HHHHHHHHHhc-cCCCCEEEECc-chhhHHHHHHHHHHHHcCcEEEEEecCC-CCCcCHHHHHHhcCC--------CCeE
Confidence 99999999885 67899988753 4566654 45566677799999999875 567899999888742 5899
Q ss_pred EEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 305 FVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 305 Va~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
|++++.+|.||.++|++.| ..||++|+++++|++|++|. .++|+...++||+++|+|||+++ |.|+|+||++++.
T Consensus 141 v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~--~~~~~~~~~~D~~~~s~~K~l~~-p~g~g~l~~~~~~ 216 (376)
T TIGR01977 141 IVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGV--IPIDMTELAIDMLAFTGHKGLLG-PQGTGGLYIREGI 216 (376)
T ss_pred EEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCc--cCCCchhcCCCEEEecccccccC-CCCceEEEEcCCc
Confidence 9999999999999999854 57899999999999999997 69999999999999999999888 9999999999976
No 21
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.97 E-value=5.4e-31 Score=290.80 Aligned_cols=208 Identities=14% Similarity=0.039 Sum_probs=162.3
Q ss_pred ccCCCC-ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 144 YLHLSP-KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 144 FP~L~~-~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
.|.+.+ ++|||+|.+++.|..|++++.+ .+. ...+..+...+.++++|+.++++||++ ++|+|+||
T Consensus 6 ~~~~~~~~~~f~~Gp~~~~~~~v~~a~~~-------~~~-----~~~hr~~~f~~~~~~~r~~l~~l~~~~-~~~~v~~~ 72 (378)
T PRK03080 6 IPALRPADPRFSSGPCKKRPGWQLEALAD-------ALL-----GRSHRQKPVKALLKRVIEGTRELLSLP-EGYEVGIV 72 (378)
T ss_pred CCCcCCCCCCcCCCCcCCChHHHHHHHHh-------hhc-----ccCcCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEE
Confidence 455555 8999999999999888887532 010 011223445689999999999999995 34679999
Q ss_pred C-CHHHHHHHHHhhCCCCC-CCeEEEecccCchhHHHHHH-HHHHcCc-EEEEEeccCCCCccCHHHHHHHHhhhhccCC
Q 002866 223 V-SRGSAFKLLAESYPFHT-NKKLLTMFDYESQSVNWMAQ-SAKEKGA-KVYSAWFKWPTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 223 s-nATeALnLVaeslpf~~-Gd~ILT~~DhEHnSVl~~~~-~AkrkGa-eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~ 298 (872)
+ |+|.|++.++.++ +++ ++.+++..+| .+ .|.. .+++.|+ +++.+++++ +..++.++ +.
T Consensus 73 ~gs~T~~~~~~~~~l-~~~~~~~vi~~g~f--~~--~~~~~~~~~~g~~~v~~~~~~~-g~~~d~~~----i~------- 135 (378)
T PRK03080 73 PGSDTGAWEMALWSL-LGARRVDHLAWESF--GS--KWATDVVKQLKLEDPRVLEADY-GSLPDLSA----VD------- 135 (378)
T ss_pred CCchHHHHHHHHHhc-CCCCcceEEEeCHH--HH--HHHHHHHhhcCCCCceEeccCC-CCCCCHhh----cC-------
Confidence 6 9999999999998 554 4445554444 33 3444 3467899 999999876 34566554 22
Q ss_pred CCCceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 002866 299 DSAAGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
.+++|+++|++|.||+++|++.|.. |++|+.++|||+|++|+ +++|+.+ +||+++|+|||||+ |.|+|+||+
T Consensus 136 --~~~~V~~~h~~t~tG~~~pi~~I~~-~~~g~~~vVDa~qs~G~--~pidv~~--iD~~~~s~~K~l~~-P~G~g~l~v 207 (378)
T PRK03080 136 --FDRDVVFTWNGTTTGVRVPVARWIG-ADREGLTICDATSAAFA--LPLDWSK--LDVYTFSWQKVLGG-EGGHGMAIL 207 (378)
T ss_pred --CCCCEEEEecCCccceeccchhhcc-ccCCCeEEEeccccccc--CCCCHHH--CcEEEEehhhhCCC-CCceEEEEE
Confidence 1567999999999999999987666 88999999999999998 7999986 79999999999988 899999999
Q ss_pred eCCCcccccCC
Q 002866 379 KKSVMGSLQNQ 389 (872)
Q Consensus 379 Rk~~i~~L~P~ 389 (872)
+++.++.++|.
T Consensus 208 ~~~~~~~~~p~ 218 (378)
T PRK03080 208 SPRAVERLESY 218 (378)
T ss_pred CHHHHHhhhcc
Confidence 99998888764
No 22
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=4.6e-30 Score=278.71 Aligned_cols=210 Identities=19% Similarity=0.168 Sum_probs=173.1
Q ss_pred eecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch---------HHHHHHHHHHHHHhcCCC-CCCCcEE
Q 002866 151 VCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK---------GTVEHDIKTRIMDHLNIP-ENEYGLV 220 (872)
Q Consensus 151 IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS---------~~~ieeARerIA~lLgA~-~dEY~VV 220 (872)
+||||++++++|+.+++++++ ++.. .++||++ ...++++|+.+++++|++ ++ .|+
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~-------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~--~v~ 65 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVD-------YYRH------YNANVHRGVHELSARATDAYEAAREKVARFINAPSPD--EII 65 (373)
T ss_pred CcccCccccCCCHHHHHHHHH-------HHHh------cCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCC--eEE
Confidence 699999999999999998643 1111 2344432 357889999999999997 43 599
Q ss_pred EeCCHHHHHHHHHhhCCCC--CCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccC
Q 002866 221 FTVSRGSAFKLLAESYPFH--TNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRK 297 (872)
Q Consensus 221 FTsnATeALnLVaeslpf~--~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~ 297 (872)
||+|+|+|+++++.++... +|++||+. +.+|.++. .+...++..|++++.+++++ ++.++.++|+++|..
T Consensus 66 ~~~g~t~a~~~~~~~l~~~~~~g~~vl~~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~----- 138 (373)
T cd06453 66 FTRNTTEAINLVAYGLGRANKPGDEIVTS-VMEHHSNIVPWQQLAERTGAKLKVVPVDD-DGQLDLEALEKLLTE----- 138 (373)
T ss_pred EeCCHHHHHHHHHHHhhhcCCCCCEEEEC-cchhHHHHHHHHHHHhhcCcEEEEeecCC-CCCcCHHHHHHHhcC-----
Confidence 9999999999999998764 78898876 34566653 45556667899999999985 578999999988853
Q ss_pred CCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 002866 298 KDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCL 376 (872)
Q Consensus 298 ~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~L 376 (872)
++++|++++++|.||.++|++ ++..|+++|+++++|+++..|. .++++..+++|++++|+||||| |.|+|++
T Consensus 139 ---~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~--~~g~g~~ 211 (373)
T cd06453 139 ---RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGH--MPVDVQDLGCDFLAFSGHKMLG--PTGIGVL 211 (373)
T ss_pred ---CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCc--eeeeccccCCCEEEeccccccC--CCCcEEE
Confidence 588999999999999999997 5667899999999999999887 6888888999999999999999 4699999
Q ss_pred EEeCCCcccccCC
Q 002866 377 LIKKSVMGSLQNQ 389 (872)
Q Consensus 377 yVRk~~i~~L~P~ 389 (872)
+++++.++.+++.
T Consensus 212 ~~~~~~~~~~~~~ 224 (373)
T cd06453 212 YGKEELLEEMPPY 224 (373)
T ss_pred EEchHHhhcCCCe
Confidence 9999988877753
No 23
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.97 E-value=9.9e-30 Score=278.42 Aligned_cols=203 Identities=16% Similarity=0.215 Sum_probs=144.5
Q ss_pred cCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCc-CC---CchHHHHHHHHHHHHHhcCCCCCCCcEEEeCC-HHHHH
Q 002866 155 YCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALY-GG---AEKGTVEHDIKTRIMDHLNIPENEYGLVFTVS-RGSAF 229 (872)
Q Consensus 155 yAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~y-gN---psS~~~ieeARerIA~lLgA~~dEY~VVFTsn-ATeAL 229 (872)
++|.++.|+.|++++.+ + +..+. +... ..| -+ +...+.++++|+.+++|||++ ++|.||||+| +|+|+
T Consensus 4 ~pGp~~~p~~V~~a~~~---~-~~~~~-~~~r-g~~~~~~r~~~~~~~~~~~r~~l~~l~~~~-~~~~vvf~~gs~T~a~ 76 (355)
T cd00611 4 SAGPAALPEEVLEQAQK---E-LLDFN-GLGM-SVMEMSHRSKDFEAIVNEAESDLRELLNIP-DNYKVLFLQGGATGQF 76 (355)
T ss_pred CCCCCCCCHHHHHHHHH---H-Hhhcc-cCCc-cccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHH
Confidence 46788899999998643 1 00111 1110 001 01 223478999999999999984 3568999999 99999
Q ss_pred HHHHhhC--CCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCcc-CHHHHH-HHHhhhhccCCCCCceEE
Q 002866 230 KLLAESY--PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKL-CSTDLR-KQISSKKRRKKDSAAGLF 305 (872)
Q Consensus 230 nLVaesl--pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~I-d~edLe-~~I~~~~rr~~~~~T~LV 305 (872)
++++.++ +++++++|++. .++|. +.+.+++.|+++++++++.. +.+ +..++. ..+ +++|++|
T Consensus 77 ~~~~~~l~~~~~~~~~i~~g-~~~~~----~~~~a~~~g~~~~~~~~~~~-g~~~~~~~~~~~~~--------~~~~~lV 142 (355)
T cd00611 77 AAVPLNLLGDKGTADYVVTG-AWSAK----AAKEAKRYGGVVVIVAAKEE-GKYTKIPDVETWDL--------APDAAYV 142 (355)
T ss_pred HHHHHhcCCCCCeEEEEECC-HHHHH----HHHHHHhcCCCcEEEecccc-cCCCCCCCHhhcCC--------CCCCCEE
Confidence 9999998 33456666543 23333 35677889999999998632 222 322222 122 2468999
Q ss_pred EEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccc
Q 002866 306 VFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGS 385 (872)
Q Consensus 306 a~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~ 385 (872)
+++|++|.||++++ ..++.+|+.++|||+|++|+ .++|++++++ +++|+||+|| |.|+|+||+|++.++.
T Consensus 143 ~~~h~~t~tG~~~~----~i~~~~g~~~~VDa~qs~g~--~~idv~~~~~--~~ss~~K~lG--P~G~g~l~~~~~~~~~ 212 (355)
T cd00611 143 HYCSNETIHGVEFD----EVPDTGGVPLVADMSSNILS--RPIDVSKFGV--IYAGAQKNLG--PAGVTVVIVRKDLLGK 212 (355)
T ss_pred EEeCCcccccEEcc----eecccCCCeEEEEccccccC--CCCCHHHhCE--EEeecccccC--CCceEEEEECHHHHhh
Confidence 99999999999854 23345999999999999998 7999998765 4477999997 7899999999998876
Q ss_pred ccC
Q 002866 386 LQN 388 (872)
Q Consensus 386 L~P 388 (872)
++|
T Consensus 213 ~~~ 215 (355)
T cd00611 213 ARK 215 (355)
T ss_pred ccc
Confidence 654
No 24
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.97 E-value=2e-28 Score=265.19 Aligned_cols=203 Identities=17% Similarity=0.151 Sum_probs=166.6
Q ss_pred ecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch---------HHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 152 CLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK---------GTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 152 YLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS---------~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
||||++++|+|+.|++++.+ ++.. .++||++ .+.++++|+.+|+++|++++ +|+||
T Consensus 1 yld~a~~~~~~~~v~~a~~~-------~~~~------~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~v~~~ 65 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLP-------WLLE------EFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE--EVIFT 65 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHH-------HHHh------cCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEe
Confidence 99999999999999998643 1211 2345542 25688999999999999876 49999
Q ss_pred CCHHHHHHHHHhhCC---CCCC-CeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCC
Q 002866 223 VSRGSAFKLLAESYP---FHTN-KKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 223 snATeALnLVaeslp---f~~G-d~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~ 298 (872)
+|+|+|+++++.++. +.+| +.|++. +.+|+++......++..|++++.+++++ ++.++.++|++++..
T Consensus 66 ~g~t~a~~~~l~~l~~~~~~~g~~~vi~~-~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~------ 137 (353)
T TIGR03235 66 SGATESNNLAILGLARAGEQKGKKHIITS-AIEHPAVLEPIRALERNGFTVTYLPVDE-SGRIDVDELADAIRP------ 137 (353)
T ss_pred CCHHHHHHHHHHHHHHhcccCCCCeeeEc-ccccHHHHHHHHHHHhcCCEEEEEccCC-CCcCCHHHHHHhCCC------
Confidence 999999999888763 2456 556554 5567777654455677899999999986 577899999887742
Q ss_pred CCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEE
Q 002866 299 DSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLL 377 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~Ly 377 (872)
+|++|++++++|.||.++|++ +++.|+++|+++++|++|++|. +++|+.+.++||+++|+|||+| |.|+|+||
T Consensus 138 --~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p~g~g~l~ 211 (353)
T TIGR03235 138 --DTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGK--ITVDLSADRIDLISCSGHKIYG--PKGIGALV 211 (353)
T ss_pred --CCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCC--ccccccccCCCEEEeehhhcCC--CCceEEEE
Confidence 589999999999999999997 4577899999999999999997 7999999999999999999976 88999999
Q ss_pred EeCCCc
Q 002866 378 IKKSVM 383 (872)
Q Consensus 378 VRk~~i 383 (872)
++++..
T Consensus 212 ~~~~~~ 217 (353)
T TIGR03235 212 IRKRGK 217 (353)
T ss_pred EccCcc
Confidence 998754
No 25
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.95 E-value=2e-25 Score=248.27 Aligned_cols=218 Identities=10% Similarity=0.037 Sum_probs=176.7
Q ss_pred cCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCC
Q 002866 145 LHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVS 224 (872)
Q Consensus 145 P~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsn 224 (872)
-.+++..||...|-+++++.|++++.+. +. .+..+...+.++++|+.+++++|++++ +.++||.+
T Consensus 4 ~~~~~~~~l~~pGP~~~~~~V~~a~~~~-----------~~---~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~vi~~~~ 68 (401)
T PLN02409 4 VYAPGRNHLFVPGPVNIPERVLRAMNRP-----------NE---DHRSPAFPALTKELLEDVKYIFKTKSG-TPFIFPTT 68 (401)
T ss_pred ccCCCCceeccCCCCCCCHHHHHHhcCC-----------CC---CCCCHHHHHHHHHHHHHHHHHhCCCCC-CEEEEeCC
Confidence 3445677899999999999999875321 11 123444467899999999999999753 47999999
Q ss_pred HHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceE
Q 002866 225 RGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGL 304 (872)
Q Consensus 225 ATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~L 304 (872)
+|+++..++.++ +++||+||+.. .+|.+.. |.+.+++.|++++.+++++. ..++.+++++++.... .+++++
T Consensus 69 gt~a~~~a~~~~-~~~Gd~Vlv~~-~~~~~~~-~~~~~~~~g~~v~~v~~~~~-~~~~~~~l~~~l~~~~----~~~~k~ 140 (401)
T PLN02409 69 GTGAWESALTNT-LSPGDKVVSFR-IGQFSLL-WIDQMQRLNFDVDVVESPWG-QGADLDILKSKLRQDT----NHKIKA 140 (401)
T ss_pred cHHHHHHHHHhc-CCCCCEEEEeC-CCchhHH-HHHHHHHcCCceEEEECCCC-CCCCHHHHHHHHhhCc----CCCccE
Confidence 999999888775 78999987663 4555543 56778889999999999874 3478999999886410 126899
Q ss_pred EEEeCccCcccchhcHHH-HHH--HHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 305 FVFPVQSRVTGAKYSYQW-MAL--AQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 305 Va~p~vSNvTG~i~PLe~-I~~--Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
|+++|.+|.||.++|++. .+. ||++|+++++|++|++|. +++|+.++++||+++|+||||++ |.|+|+||++++
T Consensus 141 v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~--~~id~~~~~~D~~~~s~~K~l~~-P~G~G~l~~~~~ 217 (401)
T PLN02409 141 VCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGA--LDFRMDEWGVDVALTGSQKALSL-PTGLGIVCASPK 217 (401)
T ss_pred EEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCC--ccccccccCccEEEEcCccccCc-CCCcceeEECHH
Confidence 999999999999999984 456 899999999999999997 79999999999999999999987 889999999999
Q ss_pred CcccccC
Q 002866 382 VMGSLQN 388 (872)
Q Consensus 382 ~i~~L~P 388 (872)
.++.+.+
T Consensus 218 ~~~~~~~ 224 (401)
T PLN02409 218 ALEASKT 224 (401)
T ss_pred HHHHHhc
Confidence 8777654
No 26
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.94 E-value=2e-24 Score=243.96 Aligned_cols=205 Identities=13% Similarity=0.021 Sum_probs=157.5
Q ss_pred CCCceecccCC--------CCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch----HHHHHHHHHHHHHhcCCC-
Q 002866 147 LSPKVCLDYCG--------FGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK----GTVEHDIKTRIMDHLNIP- 213 (872)
Q Consensus 147 L~~~IYLDyAA--------tgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS----~~~ieeARerIA~lLgA~- 213 (872)
+...+||||++ ++++.+.+.+.+.. .+.. .++||++ .++++++|+.+|++||++
T Consensus 31 ~~~~iyld~~a~~~~~~~~tt~~~p~~~~~~~~-------~l~~------~~~np~s~~~~~~le~~~~~~la~llg~~~ 97 (431)
T TIGR01788 31 IHDELSLDGNPRLNLATFVTTWMEPEARKLMDE-------TINK------NMIDKDEYPQTAEIENRCVNMLADLWHAPA 97 (431)
T ss_pred HHHHhhhcCCcceeeeeeeCCCCCHHHHHHHHH-------HHhc------CCCCcccCccHHHHHHHHHHHHHHHhCCCC
Confidence 44478999999 88887777665322 1221 3456553 478999999999999998
Q ss_pred C-CCCcEEE--eCCHHHHHHHHHhhCCC-------CCC-----CeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC
Q 002866 214 E-NEYGLVF--TVSRGSAFKLLAESYPF-------HTN-----KKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT 278 (872)
Q Consensus 214 ~-dEY~VVF--TsnATeALnLVaeslpf-------~~G-----d~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~ 278 (872)
+ ++ ++| |+|+|||+++.+.+... +.| ..|+++ +.+|.++. +.++..|++++.+|++..+
T Consensus 98 ~~~~--~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s-~~~H~sv~---ka~~~lg~~v~~i~~d~~~ 171 (431)
T TIGR01788 98 KDAE--AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMG-SNVQVCWE---KFARYFDVELREVPMDPGR 171 (431)
T ss_pred CCCC--CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEc-CcchHHHH---HHHHHcCceeEEEecCCCc
Confidence 3 34 666 79999999987654321 112 235544 66788765 4456679999999998644
Q ss_pred CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHC------CcEEEeecccc-------CCCC
Q 002866 279 LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQN------HWHVLLDAGSL-------GPKD 344 (872)
Q Consensus 279 g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~------G~~VLVDAAQ~-------aG~~ 344 (872)
+.++.++|+++|.+ +|.||++++++|+||+++|++. ...|+++ |+++||||||. .++
T Consensus 172 ~~vd~~~L~~~i~~--------~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~- 242 (431)
T TIGR01788 172 YVIDPEQVVEAVDE--------NTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPD- 242 (431)
T ss_pred eeeCHHHHHHHHhh--------CCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCC-
Confidence 68999999999964 4889999999999999999985 5677888 89999999999 554
Q ss_pred CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 345 MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 345 mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
+++|+...++|++++|+|||+.+ |.|+|+||+|+.
T Consensus 243 -~~~~~~~~~~DSis~s~HK~~~~-P~g~G~l~~r~~ 277 (431)
T TIGR01788 243 -LEWDFRLPRVKSINVSGHKYGLV-YPGVGWVIWRDE 277 (431)
T ss_pred -chhhcCCCCceEEEECchhccCC-CCCcEEEEEeCh
Confidence 56777767888899999999745 999999999986
No 27
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.94 E-value=2.6e-24 Score=232.47 Aligned_cols=204 Identities=13% Similarity=0.104 Sum_probs=162.3
Q ss_pred cCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHh
Q 002866 155 YCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAE 234 (872)
Q Consensus 155 yAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVae 234 (872)
+++..++|+.+++++.+ .+. .+..+...+.++++|+.+++++|+++ ++.++||.|+|+|+++++.
T Consensus 4 ~~~~~~~~~~v~~a~~~-----------~~~---~~~~~~~~~~~~~~~~~la~~~g~~~-~~~~~~~~~~t~al~~~~~ 68 (356)
T cd06451 4 IPGPSNVPPRVLKAMNR-----------PML---GHRSPEFLALMDEILEGLRYVFQTEN-GLTFLLSGSGTGAMEAALS 68 (356)
T ss_pred cCCCcCCCHHHHHHhCC-----------Ccc---CCCCHHHHHHHHHHHHHHHHHhcCCC-CCEEEEecCcHHHHHHHHH
Confidence 45666788888887532 111 12344445778999999999999954 3468899999999999999
Q ss_pred hCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcc
Q 002866 235 SYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVT 314 (872)
Q Consensus 235 slpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvT 314 (872)
++. .+|++||+... .|.+. .+...++..|++++.+|++. ++.++.+++++.+.+ .++++|.+++.+|.+
T Consensus 69 ~~~-~~g~~vl~~~~-~~~~~-~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~i~~-------~~~~~v~i~~~~~~~ 137 (356)
T cd06451 69 NLL-EPGDKVLVGVN-GVFGD-RWADMAERYGADVDVVEKPW-GEAVSPEEIAEALEQ-------HDIKAVTLTHNETST 137 (356)
T ss_pred HhC-CCCCEEEEecC-CchhH-HHHHHHHHhCCCeEEeecCC-CCCCCHHHHHHHHhc-------cCCCEEEEeccCCCc
Confidence 984 68999887643 33332 24456777899999999875 467899999988863 147899999999999
Q ss_pred cchhcHHHH-HHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 315 GAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 315 G~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
|.++|++.| ..|+++|+++++|++|++|. .++++...++|++++|+|||||+ |.|+|+|+++++.++.+.
T Consensus 138 G~~~~~~~i~~~a~~~~~~li~D~~~~~g~--~~~~~~~~~~d~~~~s~~K~l~~-p~g~G~l~~~~~~~~~~~ 208 (356)
T cd06451 138 GVLNPLEGIGALAKKHDALLIVDAVSSLGG--EPFRMDEWGVDVAYTGSQKALGA-PPGLGPIAFSERALERIK 208 (356)
T ss_pred ccccCHHHHHHHHHhcCCEEEEeeehhccC--ccccccccCccEEEecCchhccC-CCCcceeEECHHHHHHHH
Confidence 999999855 57799999999999998886 58888888999999999999998 899999999988766554
No 28
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.93 E-value=1.9e-23 Score=227.37 Aligned_cols=181 Identities=14% Similarity=0.104 Sum_probs=148.6
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 193 AEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 193 psS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
+.....++++|+.+++++|+++++..|+||+|+|+|++.++.++. .+|+++++..+..+.. .+...+++.|++++.+
T Consensus 31 ~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~-~~~~~vlv~~~~~~~~--~~~~~a~~~g~~~~~v 107 (363)
T TIGR02326 31 SDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV-PKDGKLLVVINGAYGA--RIVQIAEYLGIPHHVV 107 (363)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC-CCCCeEEEEeCChhhH--HHHHHHHHcCCceEEE
Confidence 344578899999999999997643369999999999999999985 4666654433333332 1346678899999999
Q ss_pred eccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCC
Q 002866 273 WFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLS 351 (872)
Q Consensus 273 pvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs 351 (872)
++++ ++.++.+++++++... +++++|++++++|.||+++|++ +++.||++|+.+++|++|++|. .++|+.
T Consensus 108 ~~~~-~~~~d~~~l~~~l~~~------~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~--~~~~~~ 178 (363)
T TIGR02326 108 DTGE-VEPPDVVEVEAILAAD------PAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGG--IPIDIA 178 (363)
T ss_pred eCCC-CCCCCHHHHHHHHhhC------CCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccC--cccchh
Confidence 9875 5678999999988642 3467899999999999999997 4577899999999999999987 699999
Q ss_pred CCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 352 LFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 352 ~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
++++||+++|+|||+++ |.|+|+||++++.++.+
T Consensus 179 ~~~~D~~~~s~~K~l~~-p~G~G~l~~~~~~~~~~ 212 (363)
T TIGR02326 179 ELHIDYLISSANKCIQG-VPGFGFVIARQAELAAC 212 (363)
T ss_pred hcCccEEEecCcccccc-CCcceEEEECHHHHHHh
Confidence 99999999999999877 88999999998876544
No 29
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.92 E-value=3.6e-24 Score=235.99 Aligned_cols=170 Identities=11% Similarity=0.098 Sum_probs=130.1
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCCCCcEEEe-CCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHH---cCc
Q 002866 192 GAEKGTVEHDIKTRIMDHLNIPENEYGLVFT-VSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKE---KGA 267 (872)
Q Consensus 192 NpsS~~~ieeARerIA~lLgA~~dEY~VVFT-snATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~Akr---kGa 267 (872)
.+...+.++++|++++++||+++ +|+|+|| .|+|.|++.++.++..+++ -+++..++-+ .|...++. .+
T Consensus 36 ~~~f~~~~~~~r~~l~~l~~~~~-~~~v~f~~gs~T~a~~~~~~~l~~~~~-l~i~~G~~~~----~~~~~a~~~~~~~- 108 (361)
T TIGR01366 36 QAPVKNLVGRVREGLAELFSLPD-GYEVILGNGGATAFWDAATFGLIEKKS-LHLSFGEFSS----KFAKAVKLAPWLG- 108 (361)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCC-CceEEEECCchhHHHHHHHHhcccccc-cEEecCHHHH----HHHHHHHhhhccC-
Confidence 44456899999999999999964 4689997 5599999999999853322 2333333321 22233332 33
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
++..+++++. ..++. .+ ++++++|+++|++|.||+++|++.| +|++|+.++|||+|++|+ .+
T Consensus 109 ~~~~~~~~~~-~~~~~-----~~--------~~~~~lV~~~h~et~tG~~~pi~~I--~~~~g~~~iVDavqs~g~--~~ 170 (361)
T TIGR01366 109 EPIIVTADPG-SAPEP-----QA--------DPGVDVIAWAHNETSTGVAVPVRRP--EGSDDALVVIDATSGAGG--LP 170 (361)
T ss_pred CceEEecCCC-CCCCC-----cc--------CCCCCEEEEcccCCccceecccccc--cccCCCeEEEEcCccccC--CC
Confidence 7788887763 22222 11 2469999999999999999999866 588999999999999998 69
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
+|+++ +||+++|+||+||+ |.|++++|++++.++.+++.
T Consensus 171 idv~~--~D~~~~s~~K~lg~-~~Gl~~~~~s~~~~~~~~~~ 209 (361)
T TIGR01366 171 VDIAE--TDVYYFAPQKNFAS-DGGLWLAIMSPAALERIEAI 209 (361)
T ss_pred CCHHH--CCEEEEEchhhcCC-CCceEEEEECHHHHhhhhcc
Confidence 99985 89999999999997 78999999999998887754
No 30
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.92 E-value=7.9e-24 Score=232.74 Aligned_cols=164 Identities=17% Similarity=0.274 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCC-HHHHHHHHHhhCCCCCCCeEEEe--cccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVS-RGSAFKLLAESYPFHTNKKLLTM--FDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsn-ATeALnLVaeslpf~~Gd~ILT~--~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
++++++|+.+.++||++ ++|.|+|++| +|+|++.++.++. .+|++++.. ..+.| .|.+.|++.|+ +..+.
T Consensus 37 ~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~-~~~~~~l~i~~G~fg~----r~~~~a~~~g~-~~~~~ 109 (349)
T TIGR01364 37 AVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLL-AEGKVADYIVTGAWSK----KAAKEAKKYGV-VNVVA 109 (349)
T ss_pred HHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcC-CCCCeEEEEECCHHHH----HHHHHHHHhCC-cEEEe
Confidence 78999999999999984 4578999977 9999999999984 367775432 22332 45788899999 77777
Q ss_pred cc----CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCCccCC
Q 002866 274 FK----WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSLG 349 (872)
Q Consensus 274 vd----~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~mipLD 349 (872)
.+ |. -.+++++++ + .+++++|+++|..+.||+.+| ..++.++++++|||+|++|+ .++|
T Consensus 110 ~~~~~~~~-~~~~~~~~~--~--------~~~~~~v~~th~ETstGv~~~----~l~~~~~~l~iVDavss~g~--~~id 172 (349)
T TIGR01364 110 SGKEGNYT-KIPDPSTWE--I--------SEDAAYVHYCANETIHGVEFR----ELPDVKNAPLVADMSSNILS--RPID 172 (349)
T ss_pred ccccCCCC-CCCCHHhcC--C--------CCCCCEEEEcCCCCcccEecc----eecccCCCeEEEEccccccC--ccCC
Confidence 53 31 123444332 1 135899999999999999988 44566799999999999998 6999
Q ss_pred CCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 350 LSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 350 Ls~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
++++ ||+++|+||+|| |.|+|+||++++.++.++|
T Consensus 173 ~~~~--d~~~~ssqK~lg--P~Glg~l~~s~~~~~~~~~ 207 (349)
T TIGR01364 173 VSKF--GLIYAGAQKNIG--PAGLTVVIVRKDLLGRASR 207 (349)
T ss_pred HHHc--cEEEEecccccC--CCceEEEEECHHHHhhccc
Confidence 9875 699999999998 7899999999998877654
No 31
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.92 E-value=2.5e-23 Score=235.45 Aligned_cols=198 Identities=11% Similarity=0.017 Sum_probs=145.7
Q ss_pred CCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCc--CCCch--------HHHHH-HHHHHHHHhcCCCCCCCcEEEe--
Q 002866 156 CGFGLFSYIQTLHYWESSTFSLSEITANLSNHALY--GGAEK--------GTVEH-DIKTRIMDHLNIPENEYGLVFT-- 222 (872)
Q Consensus 156 AAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~y--gNpsS--------~~~ie-eARerIA~lLgA~~dEY~VVFT-- 222 (872)
++-..+|+.|++++.. .+. ..| |||++ .+.++ .+|++++++||+++++ ++||
T Consensus 41 ~sen~~s~~v~~~~~~-------~l~------~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~--~~~~~~ 105 (452)
T PTZ00094 41 ASENFTSRAVLECLGS-------CFT------NKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEE--WGVNVQ 105 (452)
T ss_pred cccccCCHHHHHHhcc-------hhh------ccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCccc--ceeecC
Confidence 6667788888886422 111 134 77764 25666 4999999999998765 7788
Q ss_pred -CCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHH-------cCcEEEEEeccCCCCccCHHHHHHHHhhhh
Q 002866 223 -VSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKE-------KGAKVYSAWFKWPTLKLCSTDLRKQISSKK 294 (872)
Q Consensus 223 -snATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~Akr-------kGaeV~~Vpvd~p~g~Id~edLe~~I~~~~ 294 (872)
+++|+|+++++.++ +++|++||+. +.+|+++.......++ .++++...+++. ++.++.++|++++...
T Consensus 106 ~~sgt~an~~v~~al-~~~gd~Ii~~-~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~g~id~~~L~~~l~~~- 181 (452)
T PTZ00094 106 PYSGSPANFAVYTAL-LQPHDRIMGL-DLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE-KGLIDYDKLEELAKAF- 181 (452)
T ss_pred CCchHHHHHHHHHHh-cCCCCEEEec-ccccCCcccccccccccccccceeeeeeeecccCC-CCCcCHHHHHHHHHHh-
Confidence 89999999999998 7899998875 5678877543211111 124444555654 4889999999998642
Q ss_pred ccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCccCCCCC---CCCcEEEEcccccCCCCC
Q 002866 295 RRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDSLGLSL---FRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 295 rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mipLDLs~---l~~DFlv~S~HK~fG~~P 370 (872)
+++++++. . +.+|.++|++.| ++||++|++++||++|++|+ ++.|+.. .++||+++|+||||++ |
T Consensus 182 ------~~~lvi~~-~-s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~--i~~~~~~~~~~~~D~l~~S~hK~l~G-P 250 (452)
T PTZ00094 182 ------RPKLIIAG-A-SAYPRDIDYKRFREICDSVGAYLMADIAHTSGL--VAAGVLPSPFPYADVVTTTTHKSLRG-P 250 (452)
T ss_pred ------CCCEEEEe-C-CCCCCccCHHHHHHHHHHcCCEEEEeccchhcc--ccCCCCCCCCCCCcEEEcCCccCCCC-C
Confidence 35676664 3 469999999855 57899999999999999997 6666532 3699999999999877 9
Q ss_pred CceEEEEEeCCCcc
Q 002866 371 TGFGCLLIKKSVMG 384 (872)
Q Consensus 371 tGvG~LyVRk~~i~ 384 (872)
.| |+||++++..+
T Consensus 251 ~G-g~l~~~~~~~~ 263 (452)
T PTZ00094 251 RS-GLIFYRKKVKP 263 (452)
T ss_pred Cc-eEEEEecccch
Confidence 99 88888876543
No 32
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.92 E-value=4.6e-24 Score=235.37 Aligned_cols=207 Identities=15% Similarity=0.169 Sum_probs=143.1
Q ss_pred ecccCCCCCCcHHHHHHhhhcccccHHHHH-HhhccC-cCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH-H
Q 002866 152 CLDYCGFGLFSYIQTLHYWESSTFSLSEIT-ANLSNH-ALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS-A 228 (872)
Q Consensus 152 YLDyAAtgp~p~~VieA~~e~~~F~ls~i~-~nL~~~-~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe-A 228 (872)
+|=++|.+++|+.|++++.+. + ..+. ..+..+ ..+..+...++++++|+.++++||++ ++|.|+|++|+++ |
T Consensus 5 ~l~~pGP~~~p~~V~~a~~~~--~--~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~ 79 (360)
T PRK05355 5 YNFSAGPAMLPEEVLEQAQQE--L--LDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQ 79 (360)
T ss_pred eeccCCCCCCCHHHHHHHHHH--h--hccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHH
Confidence 444688899999999985431 0 0000 000000 00111222479999999999999984 4567888855555 5
Q ss_pred HHHHHhhCCCCCCCeEEEe--cccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHH-HHhhhhccCCCCCceEE
Q 002866 229 FKLLAESYPFHTNKKLLTM--FDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRK-QISSKKRRKKDSAAGLF 305 (872)
Q Consensus 229 LnLVaeslpf~~Gd~ILT~--~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~-~I~~~~rr~~~~~T~LV 305 (872)
+..+..++- .+|++++.. ..++| .|.+.+++.|.. ..++.++..+..+..++++ .|. .++++|
T Consensus 80 ~Ea~~~nl~-~~g~~~l~i~~G~fg~----r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~--------~~~~~V 145 (360)
T PRK05355 80 FAMVPMNLL-GGGKKADYVDTGSWSK----KAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS--------DDAAYV 145 (360)
T ss_pred HHHHHHhcC-CCCCeEEEEECCHHHH----HHHHHHHHhCCc-eEEecccccCCCCCCChhhccCC--------CCCCEE
Confidence 666655552 356664322 22333 457788888975 6666653234555555554 443 247899
Q ss_pred EEeCccCcccchh-cHHHHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcc
Q 002866 306 VFPVQSRVTGAKY-SYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 306 a~p~vSNvTG~i~-PLe~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~ 384 (872)
+++|..+.||+++ ||..+ +|+.++|||+|++|+ .++|++++ ||+++|+||+|| |.|+|+||++++.++
T Consensus 146 ~~th~eTstGv~~~~i~~i-----~g~l~vVDavss~g~--~~idv~~~--d~~~~ssqK~lg--P~Glg~l~~s~~~l~ 214 (360)
T PRK05355 146 HYTSNETIDGTEFHELPDT-----GDVPLVADMSSDILS--RPIDVSKF--GLIYAGAQKNIG--PAGLTIVIVREDLLG 214 (360)
T ss_pred EEccCCCcceEecCccccc-----CCCcEEEEcCccccC--ccCCHHHc--cEEEEecccccc--CCceEEEEECHHHHh
Confidence 9999999999999 77655 899999999999998 69999875 799999999997 789999999999987
Q ss_pred cccC
Q 002866 385 SLQN 388 (872)
Q Consensus 385 ~L~P 388 (872)
.+.|
T Consensus 215 ~~~~ 218 (360)
T PRK05355 215 RALP 218 (360)
T ss_pred hccc
Confidence 7765
No 33
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.89 E-value=1.2e-20 Score=205.40 Aligned_cols=182 Identities=13% Similarity=0.058 Sum_probs=148.5
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 193 AEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 193 psS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
+...+.++++|+.+++++|++++...|+||.|+|+|+++++.++. .+|+++++....... . .+...+++.|+++..+
T Consensus 33 ~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~-~~~~~vlv~~~~~~~-~-~~~~~~~~~g~~~~~i 109 (368)
T PRK13479 33 DDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV-PRDGKVLVPDNGAYG-A-RIAQIAEYLGIAHVVL 109 (368)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc-CCCCeEEEEeCCchH-H-HHHHHHHHcCCcEEEE
Confidence 334468899999999999997644468899999999999999986 467776654332211 1 2356678899999999
Q ss_pred eccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCC
Q 002866 273 WFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLS 351 (872)
Q Consensus 273 pvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs 351 (872)
|.++ ++.++.+++++++... +++++|.+++.+|.||.++|++ +...||++|+.+++|++|..|. .++|+.
T Consensus 110 ~~~~-~~~~d~~~l~~~l~~~------~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~--~~~~~~ 180 (368)
T PRK13479 110 DTGE-DEPPDAAEVEAALAAD------PRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGA--IPIDIA 180 (368)
T ss_pred ECCC-CCCCCHHHHHHHHHhC------CCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCC--cccccc
Confidence 9976 4568999999988642 3578999999999999999997 4567899999999999999886 589999
Q ss_pred CCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 352 LFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 352 ~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.+++|++++|+|||+++ |.|+|++|++++.++.+.
T Consensus 181 ~~~~d~~v~s~~K~l~g-~~G~G~l~~~~~~~~~~~ 215 (368)
T PRK13479 181 ELGIDALISSANKCIEG-VPGFGFVIARRSELEACK 215 (368)
T ss_pred ccCceEEEecCcccccc-CCCceEEEECHHHHHHhh
Confidence 99999999999998766 889999999998776554
No 34
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.88 E-value=3.4e-20 Score=200.94 Aligned_cols=217 Identities=14% Similarity=0.058 Sum_probs=153.6
Q ss_pred HHHHHhhcccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCC
Q 002866 136 IDQLRANEYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPEN 215 (872)
Q Consensus 136 ID~lR~~EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~d 215 (872)
+..+|++++|.- .+|+.+.+.+.| .+++++.+ .+..+......+ +.....++++|+.+++++|+++.
T Consensus 11 ~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~a~~~-------~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~~~~ 77 (371)
T PRK13520 11 LEEYRSEDLKYE---RILSSMCTEPHP-IARKAHEM-------FLETNLGDPGLF--PGTAKLEEEAVEMLGELLHLPDA 77 (371)
T ss_pred HHHHHhcCCCHH---HeeeeeecCchH-HHHHHHHH-------HHhcCCCCcccC--ccHHHHHHHHHHHHHHHhCCCCC
Confidence 334455555543 358877666554 45565432 121111111111 23446678999999999999754
Q ss_pred CCcEEEeCCHHHHHHHHHhhC---CCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhh
Q 002866 216 EYGLVFTVSRGSAFKLLAESY---PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISS 292 (872)
Q Consensus 216 EY~VVFTsnATeALnLVaesl---pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~ 292 (872)
.++||+++|+|+.+++..+ .++++++|++. +.+|.+ |.+.++..|++++.+|.++ ++.++.++|+++|..
T Consensus 78 --~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~-~~~h~s---~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~ 150 (371)
T PRK13520 78 --YGYITSGGTEANIQAVRAARNLAKAEKPNIVVP-ESAHFS---FDKAADMLGVELRRAPLDD-DYRVDVKAVEDLIDD 150 (371)
T ss_pred --CeEEecCcHHHHHHHHHHHHhhccCCCceEEec-CcchHH---HHHHHHHcCceEEEecCCC-CCcCCHHHHHHHHhh
Confidence 4899999999988876543 34467788776 445665 4456677899999999876 567899999998863
Q ss_pred hhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCC-----CCccCCCCCCCCcEEEEcccccC
Q 002866 293 KKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPK-----DMDSLGLSLFRPDFIITSFYRVF 366 (872)
Q Consensus 293 ~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~-----~mipLDLs~l~~DFlv~S~HK~f 366 (872)
++.+|++.+.+|.||.+.|++. .+.|+++|++++||++|.++. ....+|+...++|++++|+|||.
T Consensus 151 --------~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~ 222 (371)
T PRK13520 151 --------NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMG 222 (371)
T ss_pred --------CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCcccc
Confidence 3677778888899999999985 567899999999999987542 00125666678999999999997
Q ss_pred CCCCCceEEEEEeCC
Q 002866 367 GFDPTGFGCLLIKKS 381 (872)
Q Consensus 367 G~~PtGvG~LyVRk~ 381 (872)
++ |.++|++++++.
T Consensus 223 ~a-~~~~G~~~~~~~ 236 (371)
T PRK13520 223 LA-PIPAGGILFRDE 236 (371)
T ss_pred Cc-cCCceEEEEcCH
Confidence 76 788999988664
No 35
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.88 E-value=3.8e-20 Score=198.37 Aligned_cols=179 Identities=13% Similarity=0.110 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
.+.++++|+.+++++|+++++..|+||+|+|+|+.+++.++. .+++++++..+..+... +...++..|++++.++++
T Consensus 30 ~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~-~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~ 106 (355)
T TIGR03301 30 NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV-PRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFS 106 (355)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc-CCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecC
Confidence 478899999999999998754468899999999999999975 34666554333222221 345567789999999987
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR 354 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~ 354 (872)
+ +..++.+++++.+..+ ++++++++++.+|.||+++|++ ++..|+++|+.+++|++++.|. .++++..++
T Consensus 107 ~-~~~~d~~~l~~~l~~~------~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~--~~~~~~~~~ 177 (355)
T TIGR03301 107 E-YEPPDLNRIEEALAAD------PDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGA--IPIDIEELD 177 (355)
T ss_pred C-CCCCCHHHHHHHHHhC------CCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCC--cccchhhcC
Confidence 5 3578999999988642 3578999999999999999997 4567899999999999998886 588998899
Q ss_pred CcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 355 PDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
+|++++|+|||+++ |.|+|+++++++.++.+.
T Consensus 178 ~d~~~~s~~K~l~~-~~G~g~~~~~~~~~~~~~ 209 (355)
T TIGR03301 178 VDALIASANKCLEG-VPGFGFVIARRDLLEASA 209 (355)
T ss_pred ccEEEecCCccccc-CCceeEEEECHHHHHHhh
Confidence 99999999999866 789999999998776543
No 36
>PRK02769 histidine decarboxylase; Provisional
Probab=99.87 E-value=2.6e-21 Score=215.59 Aligned_cols=211 Identities=16% Similarity=0.063 Sum_probs=158.6
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch--------HHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK--------GTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS--------~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
..|+-|-....++...+..+.. .... .+|||.+ .+.++++|+.+|+++|+++++...+|
T Consensus 23 ~~~~g~p~~~~~~~~~~~~~~~-------~~~~------n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~ 89 (380)
T PRK02769 23 YFNVGYPEAADFDYSALKRFFS-------FSIN------NCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYI 89 (380)
T ss_pred hcccCCCchhhcCHHHHHHHHH-------hhhc------cCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEE
Confidence 4566666666565555554321 1111 2455542 36788999999999999876534589
Q ss_pred eCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCC
Q 002866 222 TVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 222 TsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~ 300 (872)
|+|+|||+++.... ..+.++++|+++ +.+|.|+.. .++..|+++..|+++. +++++.++|+++|.+. +.
T Consensus 90 TsGgTean~~a~~~ar~~~~~~~ii~s-~~~H~Sv~k---a~~~lg~~~~~V~~~~-~g~id~~~L~~~i~~~-----~~ 159 (380)
T PRK02769 90 TNGGTEGNLYGCYLARELFPDGTLYYS-KDTHYSVSK---IARLLRIKSRVITSLP-NGEIDYDDLISKIKEN-----KN 159 (380)
T ss_pred ecChHHHHHHHHHHHHHhCCCcEEEeC-CCceehHHH---HHHHcCCCCceeccCC-CCcCcHHHHHHHHHhC-----CC
Confidence 99999996554332 235567777766 457888763 3445577778888864 7899999999999752 33
Q ss_pred CceEEEEeCccCcccchhcHHH-HHHHHHCC---cEEEeeccccCCCCCcc-------CCCCCCCCcEEEEcccccCCCC
Q 002866 301 AAGLFVFPVQSRVTGAKYSYQW-MALAQQNH---WHVLLDAGSLGPKDMDS-------LGLSLFRPDFIITSFYRVFGFD 369 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G---~~VLVDAAQ~aG~~mip-------LDLs~l~~DFlv~S~HK~fG~~ 369 (872)
+|.+|++++.+|+||++.|++. .+.|+++| +++||||||.+++ +| +|+.. ++|++++|+|||+|.
T Consensus 160 ~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~--~p~~~~~~~~d~~~-~vDsis~s~HK~~~~- 235 (380)
T PRK02769 160 QPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMI--LPFVNNPPPFSFAD-GIDSIAISGHKFIGS- 235 (380)
T ss_pred CcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEeccccee--ecccCccccCCccC-CCCEEEECCcccCCC-
Confidence 6899999999999999999985 56779998 6999999999986 54 88877 999999999999998
Q ss_pred CCceEEEEEeCCCccccc
Q 002866 370 PTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 370 PtGvG~LyVRk~~i~~L~ 387 (872)
|.|+|+||+|++.+..+.
T Consensus 236 P~g~G~l~~r~~~~~~~~ 253 (380)
T PRK02769 236 PMPCGIVLAKKKYVERIS 253 (380)
T ss_pred CCCcEEEEEehhhhhhcc
Confidence 999999999998665443
No 37
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=99.86 E-value=5.3e-23 Score=234.34 Aligned_cols=220 Identities=23% Similarity=0.283 Sum_probs=152.7
Q ss_pred HhhcccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch--------HHHHHHHHHHHHHhcC
Q 002866 140 RANEYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK--------GTVEHDIKTRIMDHLN 211 (872)
Q Consensus 140 R~~EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS--------~~~ieeARerIA~lLg 211 (872)
|+++|..+. ||||++.+++++.+.+.+. |. .+ .....|||+ .+.++++|-+|..+++
T Consensus 14 r~~e~s~~~---yldhag~tl~sesq~~g~~----~~----sq----~~e~~nphs~~~ts~~l~~~v~Q~r~ril~~f~ 78 (728)
T KOG2142|consen 14 RDREFSRLA---YLDHAGRTLFSESQLEGVA----FQ----SQ----SSENANPHSHLGTSRSLARLVAQVRLRILALFN 78 (728)
T ss_pred hhHHHHHHH---HHHhhhhhhhhhcccchhh----hh----hh----ccccCCCcccccchHHHHHHHHHHHHHHHHHhc
Confidence 666788776 9999999999999887632 21 11 123456664 2688999999999999
Q ss_pred CCCCCCcEEEeCCHHHHHHHHHhhCCCCC-CCeE---EEecccCchhHH--HHHHHHHHcCcEEEEE-ecc--CCCCccC
Q 002866 212 IPENEYGLVFTVSRGSAFKLLAESYPFHT-NKKL---LTMFDYESQSVN--WMAQSAKEKGAKVYSA-WFK--WPTLKLC 282 (872)
Q Consensus 212 A~~dEY~VVFTsnATeALnLVaeslpf~~-Gd~I---LT~~DhEHnSVl--~~~~~AkrkGaeV~~V-pvd--~p~g~Id 282 (872)
....+|.++||. .|+||++|++.|||-. +.++ =.+ .|.|.++. .++. ...|+-+..+ ... |+. +
T Consensus 79 tta~dy~v~lp~-~t~al~~vae~fp~~s~tekid~lrs~-~y~hls~s~~~~~~--~~~~~gl~sy~q~~~i~~~---~ 151 (728)
T KOG2142|consen 79 TTAFDYEVSLPA-LTEALKLVAEAFPFYSQTEKIDNLRSD-EYGHLSSSGHLMRL--DYSGIGLFSYSQTNEISDS---E 151 (728)
T ss_pred cccccccchhHH-HHHHHHHHHHhCccccccccccchhhh-hhcccccccceeee--eeeccceEEeeeeeecccc---c
Confidence 999999999999 9999999999999843 3333 122 23333333 2332 1123333322 111 110 1
Q ss_pred HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHHHH-HCCcEEEeeccccCCCCCccCCCCCCCCcEEEEc
Q 002866 283 STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQ-QNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITS 361 (872)
Q Consensus 283 ~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Ar-e~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S 361 (872)
...+-+... .-....|++++.++|+.|.++-..+|...+ ..+|+++||+|..+.. .+||++.+++||...
T Consensus 152 ~~sls~~~~------~ls~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrvSa--f~Ldaesy~f~~~~~- 222 (728)
T KOG2142|consen 152 EFSLSESEA------NLSEHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRVSA--FPLDAESYPFDFNPK- 222 (728)
T ss_pred ccccccccc------CcccchhcccchhcccccceeeeeeecccccCCceEEEEEeeccccc--ccchHhhCCCcccch-
Confidence 111111111 123468999999999999985555666554 7899999999999987 799999999999999
Q ss_pred ccccCCCCCCceEEEEEeCCCcccccCCCCCCCCCeEEE
Q 002866 362 FYRVFGFDPTGFGCLLIKKSVMGSLQNQSGQTGSGMVKI 400 (872)
Q Consensus 362 ~HK~fG~~PtGvG~LyVRk~~i~~L~P~~~~~GgGtV~~ 400 (872)
+||+||+ |+ |+|.+.++..+. .|||+++.
T Consensus 223 lltiFgy-et--gAvlv~~r~A~~-------~Ggkt~sa 251 (728)
T KOG2142|consen 223 LLTIFGY-ET--GAVLVMNRSAEL-------KGGKTASA 251 (728)
T ss_pred heeecCC-Cc--hhhHHHhhhhHh-------hcCcccee
Confidence 9999999 87 888877766543 27887755
No 38
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.86 E-value=2.4e-19 Score=194.81 Aligned_cols=219 Identities=14% Similarity=0.079 Sum_probs=148.4
Q ss_pred hhHHHHH---hhcccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc
Q 002866 134 DKIDQLR---ANEYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL 210 (872)
Q Consensus 134 ~~ID~lR---~~EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL 210 (872)
+-++.++ ++.-|.-. -.+|++.++.|.|. +++++.+ +...++.+... .|......+++|+.||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~a~~~-------~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~ 72 (373)
T TIGR03812 4 EVLEELKEYRSEDLKYSD-GRILGSMCTNPHPI-AVKAYDM-------FIETNLGDPGL--FPGTKKIEEEVVGSLGNLL 72 (373)
T ss_pred HHHHHHHHHHhcCCCCCC-CcEEEEEeCCchHH-HHHHHHH-------HhhcCCCCccc--CccHHHHHHHHHHHHHHHh
Confidence 3445554 33333322 34788888877665 3444321 11111111001 1333467789999999999
Q ss_pred CCCCCCCcEEEeCCHHHHHHHHHhhCC---C--CCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHH
Q 002866 211 NIPENEYGLVFTVSRGSAFKLLAESYP---F--HTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTD 285 (872)
Q Consensus 211 gA~~dEY~VVFTsnATeALnLVaeslp---f--~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~ed 285 (872)
|+++. .+++|.|+|+++.+++..+. + .+|++|++. +.+|.+ |...++..|++++.+++++ ++.++.++
T Consensus 73 g~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~-~~~h~~---~~~~~~~~G~~~~~v~~~~-~~~~d~~~ 145 (373)
T TIGR03812 73 HLPDA--YGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVP-ESAHFS---FEKAAEMLGLELRYAPLDE-DYTVDVKD 145 (373)
T ss_pred CCCCC--CeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEEC-CcchHH---HHHHHHHcCCeEEEEeeCC-CCCcCHHH
Confidence 99765 38889999999877655432 1 356788876 345654 4456777899999999875 57789999
Q ss_pred HHHHHhhhhccCCCCCc-eEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCC--------CCccCCCCCCCC
Q 002866 286 LRKQISSKKRRKKDSAA-GLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPK--------DMDSLGLSLFRP 355 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T-~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~--------~mipLDLs~l~~ 355 (872)
|++++.. ++ .++++. .+|.||++.|++. +..|+++|++++||+||..+. ....+|+...++
T Consensus 146 l~~~l~~--------~~~~vv~~~-~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~ 216 (373)
T TIGR03812 146 VEDLIDD--------NTIGIVGIA-GTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGV 216 (373)
T ss_pred HHHHHhh--------CcEEEEEEC-CCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCC
Confidence 9998864 24 345444 6899999999974 567899999999999986431 002467766789
Q ss_pred cEEEEcccccCCCCCCceEEEEEeC
Q 002866 356 DFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
|++++|+|||+++ |.|+|++++++
T Consensus 217 d~~~~s~~K~~~~-~~~~G~~~~~~ 240 (373)
T TIGR03812 217 QSITIDPHKMGLS-PIPAGGILFRS 240 (373)
T ss_pred CEEEECccccCCC-cCCceEEEEeC
Confidence 9999999998665 78888777644
No 39
>PLN03032 serine decarboxylase; Provisional
Probab=99.85 E-value=2.7e-20 Score=207.20 Aligned_cols=183 Identities=12% Similarity=0.053 Sum_probs=144.5
Q ss_pred CcCCCch--------HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHH
Q 002866 189 LYGGAEK--------GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMA 259 (872)
Q Consensus 189 ~ygNpsS--------~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~ 259 (872)
.+|||.+ .++++++|+.+|+++|++++++.-+||+|+|||+++...+.. ..++..|+++ +.+|.|+.
T Consensus 50 ~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s-~~~H~Sv~--- 125 (374)
T PLN03032 50 NLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYAS-RESHYSVF--- 125 (374)
T ss_pred CCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeC-CCceeHHH---
Confidence 4677753 478899999999999999876445999999999987655422 1233455555 55788886
Q ss_pred HHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCC-----cEE
Q 002866 260 QSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNH-----WHV 333 (872)
Q Consensus 260 ~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G-----~~V 333 (872)
+.++..|++++.||++. +++++.++|+++|... ..++.+|++++.+++||++.|++.| ..|+++| +++
T Consensus 126 kaa~~lg~~~~~V~~d~-~g~id~~~L~~~i~~~-----~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~l 199 (374)
T PLN03032 126 KAARMYRMEAVKVPTLP-SGEIDYDDLERALAKN-----RDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYI 199 (374)
T ss_pred HHHHHcCCCCeEeeeCC-CCcCcHHHHHHHHHHc-----CCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeE
Confidence 34555678888999975 6899999999999752 1257899999999999999999855 5678886 589
Q ss_pred EeeccccCCCCCccC-------CCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccc
Q 002866 334 LLDAGSLGPKDMDSL-------GLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGS 385 (872)
Q Consensus 334 LVDAAQ~aG~~mipL-------DLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~ 385 (872)
||||||.+++ +|+ |+. .++|.+++|+|||+|. |.|+|+||+|+..+..
T Consensus 200 HvDaA~gg~~--~p~~~~~~~~~~~-~~vDSis~s~HK~~g~-P~g~G~ll~r~~~~~~ 254 (374)
T PLN03032 200 HCDGALFGLM--MPFVSRAPEVTFR-KPIGSVSVSGHKFLGC-PMPCGVALTRKKHVKA 254 (374)
T ss_pred EEEccchhhh--hhccCCCcccCCC-cCCcEEEECcccccCC-CcCeEEEEEEchhhHh
Confidence 9999998886 564 554 3799999999999998 9999999999876543
No 40
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.83 E-value=5.6e-19 Score=189.64 Aligned_cols=177 Identities=17% Similarity=0.079 Sum_probs=132.9
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC--CC---------CCC--eEEEecccCchhHHHHH
Q 002866 193 AEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP--FH---------TNK--KLLTMFDYESQSVNWMA 259 (872)
Q Consensus 193 psS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp--f~---------~Gd--~ILT~~DhEHnSVl~~~ 259 (872)
+...++.+++++.+++++|++..+..++||+|+|+|+.+++.++. +. +++ .|++. +..|.++..
T Consensus 34 ~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~h~~~~~-- 110 (345)
T cd06450 34 PAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCS-DQAHVSVEK-- 110 (345)
T ss_pred chhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEc-CcchhHHHH--
Confidence 344577888999999999996223369999999999998887652 11 222 34444 445666543
Q ss_pred HHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeecc
Q 002866 260 QSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAG 338 (872)
Q Consensus 260 ~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAA 338 (872)
.++..|++++.+|++. ++.++.++|+++|.+... ...+++++++++.+|.||.+.|++. ++.|+++|+++++|++
T Consensus 111 -~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~--~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a 186 (345)
T cd06450 111 -AAAYLDVKVRLVPVDE-DGRMDPEALEAAIDEDKA--EGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAA 186 (345)
T ss_pred -HHHHHhcCeEEeeeCC-CCCcCHHHHHHHHHHHHH--CCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEech
Confidence 3344589999999876 468999999999865211 2235789999999999999999974 5678999999999999
Q ss_pred ccCCCCCccCCCCC------CCCcEEEEcccccCCCCCCceEEEEEe
Q 002866 339 SLGPKDMDSLGLSL------FRPDFIITSFYRVFGFDPTGFGCLLIK 379 (872)
Q Consensus 339 Q~aG~~mipLDLs~------l~~DFlv~S~HK~fG~~PtGvG~LyVR 379 (872)
+..+. .+++... .++|++++|+|||+++ |.|+|+++++
T Consensus 187 ~~~~~--~~~~~~~~~~~~~~~~d~~~~s~~K~l~~-p~g~g~~~~~ 230 (345)
T cd06450 187 YGGFL--LPFPEPRHLDFGIERVDSISVDPHKYGLV-PLGCSAVLVR 230 (345)
T ss_pred hhHHH--hhChhhHHHhcCccccCEEEEchhHhhCC-CcchHHHHHH
Confidence 98875 3443222 3799999999999887 8899988876
No 41
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.82 E-value=3.1e-19 Score=197.68 Aligned_cols=210 Identities=12% Similarity=0.042 Sum_probs=166.2
Q ss_pred ceecccC-CCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch---------HHHHHHHHHHHHHhcCCCCCCCcE
Q 002866 150 KVCLDYC-GFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK---------GTVEHDIKTRIMDHLNIPENEYGL 219 (872)
Q Consensus 150 ~IYLDyA-Atgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS---------~~~ieeARerIA~lLgA~~dEY~V 219 (872)
+|.||-- -.+|+++.+++++.+ +.. .++||++ ...++++|+.+|+++|++ .+
T Consensus 20 ~~~~~~~~~~~p~~~~~~~a~~~--------~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~----~~ 81 (387)
T PRK09331 20 FINLDPIQRGGILTPEARKALIE--------YGD------GYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD----EA 81 (387)
T ss_pred ccccChhhcCCCCCHHHHHHHHH--------HHh------ccCCCcccccccccccChHHHHHHHHHHHHhCCC----cE
Confidence 5666643 567999999988643 111 2344321 246899999999999994 27
Q ss_pred EEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec--cCCCCccCHHHHHHHHhhhhccC
Q 002866 220 VFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF--KWPTLKLCSTDLRKQISSKKRRK 297 (872)
Q Consensus 220 VFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv--d~p~g~Id~edLe~~I~~~~rr~ 297 (872)
+||+|+|+|+.+++.++ +++|++|++. ..+|.++.. .++..|++++.++. ++ ++.++.+++++.|....+ .
T Consensus 82 ~~~~g~t~a~~~al~~l-~~~gd~Vlv~-~~~h~s~~~---~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~-~ 154 (387)
T PRK09331 82 RVTHGAREGKFAVMHSL-CKKGDYVVLD-GLAHYTSYV---AAERAGLNVREVPKTGYP-EYKITPEAYAEKIEEVKE-E 154 (387)
T ss_pred EEeCCHHHHHHHHHHHh-cCCCCEEEEC-CCchHHHHH---HHHHcCCEEEEEeCccCc-CCCcCHHHHHHHHHHhhh-c
Confidence 89999999999999888 5889998876 456666643 35668999999998 44 567899999998864210 1
Q ss_pred CCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 002866 298 KDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCL 376 (872)
Q Consensus 298 ~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~L 376 (872)
..+++++|++++.+|.||.+.|++. ++.||++|+.+++|++|++|. ++++...+++|++++|+||++++ |.|+|+|
T Consensus 155 ~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~--~~~~~~~~g~D~~~~s~~K~l~~-~~~~G~l 231 (387)
T PRK09331 155 TGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGR--MPVDGKKLGADFIVGSGHKSMAA-SAPSGVL 231 (387)
T ss_pred cCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCC--cCCCHHHcCCCEEEeeCcccccC-CCCEEEE
Confidence 1246899999999999999999974 567899999999999999997 68999889999999999999987 8899999
Q ss_pred EEeCCCccccc
Q 002866 377 LIKKSVMGSLQ 387 (872)
Q Consensus 377 yVRk~~i~~L~ 387 (872)
+++++.++.+.
T Consensus 232 ~~~~~~i~~~~ 242 (387)
T PRK09331 232 ATTEEYADKVF 242 (387)
T ss_pred EECHHHHhhcc
Confidence 99988776554
No 42
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.82 E-value=5.1e-18 Score=207.05 Aligned_cols=204 Identities=19% Similarity=0.114 Sum_probs=150.0
Q ss_pred CCceecccCCCCC----CcHHHHHHhhhcccccHHHHHHhhccCcCcCCC---chHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGFGL----FSYIQTLHYWESSTFSLSEITANLSNHALYGGA---EKGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAtgp----~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNp---sS~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
.+.+|++|.|.++ +|..+++++.+.+.| ++. ...|-.. ...+.+.+.|..|++|+|+++++ +.
T Consensus 100 kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~----~Ta----ytPYqaEisQG~lqal~~~Qt~ia~LtG~~~an--aS 169 (993)
T PLN02414 100 KNKVFKSYIGMGYYNTHVPPVILRNILENPGW----YTQ----YTPYQAEIAQGRLESLLNYQTMITDLTGLPMSN--AS 169 (993)
T ss_pred cCCccccccCCCCCCccCCHHHHHHHHhChHH----Hhh----cCCCchHHHHHHHHHHHHHHHHHHHHhCCChhh--Ee
Confidence 4578999999999 777777876553332 121 1223211 12368899999999999999874 99
Q ss_pred EeCCHHHHHHHHHhhCCCCCC--CeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccC
Q 002866 221 FTVSRGSAFKLLAESYPFHTN--KKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRK 297 (872)
Q Consensus 221 FTsnATeALnLVaeslpf~~G--d~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~ 297 (872)
|+.|+|++.+.++.+++|++| ++|+++ +++|++. ..|+.++++.|++|+.++++.. + ...
T Consensus 170 L~d~aTAaaea~~~a~~~~~g~~~~VlVs-~~~hP~~~~v~~t~a~~~GieV~~v~~~~~----~------~~~------ 232 (993)
T PLN02414 170 LLDEGTAAAEAMAMCNNILKGKKKKFLIA-SNCHPQTIDVCQTRADGLGLEVVVADEKDF----D------YSS------ 232 (993)
T ss_pred ecCChHHHHHHHHHHHhcccCCCCEEEEc-CccCHhHHHHHHHhhhhcCCEEEEecchhh----c------ccc------
Confidence 999999999999888888765 567765 4456654 4567788899999999876421 0 000
Q ss_pred CCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccC-CCCCCCCcEEEEcccccCCCCCCc---
Q 002866 298 KDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSL-GLSLFRPDFIITSFYRVFGFDPTG--- 372 (872)
Q Consensus 298 ~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipL-DLs~l~~DFlv~S~HK~fG~~PtG--- 372 (872)
..-..++.+..|.+|.+.|++ +++.||++|++++| |++.++. ..+ ++.++++||+++++|||.+ |.|
T Consensus 233 ---~~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal--~~l~~pge~GADi~vgsgqKwg~--P~G~GG 304 (993)
T PLN02414 233 ---GDVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLAL--TMLKPPGEWGADIVVGSAQRFGV--PMGYGG 304 (993)
T ss_pred ---CceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHh--cCCCCHhhccCcEEEECCCcccc--CCCCCC
Confidence 111233467778999999997 55788999999999 8877775 455 5889999999999999962 444
Q ss_pred --eEEEEEeCCCcccc
Q 002866 373 --FGCLLIKKSVMGSL 386 (872)
Q Consensus 373 --vG~LyVRk~~i~~L 386 (872)
+|+||+|++....+
T Consensus 305 P~aGflavr~~~~r~~ 320 (993)
T PLN02414 305 PHAAFLATSQEYKRLM 320 (993)
T ss_pred CCeeEEEECHHHHhhC
Confidence 89999999875533
No 43
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.77 E-value=3.5e-18 Score=208.45 Aligned_cols=173 Identities=13% Similarity=0.125 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHH----HHHHHHHhhCCCCC-CC----eEEEecccCchhHHHHHHHHHHcCc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRG----SAFKLLAESYPFHT-NK----KLLTMFDYESQSVNWMAQSAKEKGA 267 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnAT----eALnLVaeslpf~~-Gd----~ILT~~DhEHnSVl~~~~~AkrkGa 267 (872)
++++++|+.+++++|+ + .|+||+|+| +|+++++.+| +++ |+ +||++ +.+|+++.... ...|+
T Consensus 568 ~~~~~~r~~la~i~g~--~--~v~f~pnaga~ge~a~~~vi~~~-~~~~Gd~~r~~vli~-~~aH~sn~a~a---~~~G~ 638 (993)
T PLN02414 568 EMFEDLGDLLCEITGF--D--SFSLQPNAGAAGEYAGLMVIRAY-HLSRGDHHRNVCIIP-VSAHGTNPASA---AMCGM 638 (993)
T ss_pred HHHHHHHHHHHHHhCC--C--eEEEcCCCcHHHHHHHHHHHHHH-HhccCCCCCCEEEeC-CCcCccCHHHH---HHCCC
Confidence 6899999999999999 3 499999999 9999999999 444 77 55554 23455554322 23799
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCc
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
+|+++|++. +|.+|.++|+++|..+ +.+|++|++++.||++|...||+ ++++||++|+.|+|||||.+++ +.
T Consensus 639 ~vv~v~~d~-~G~vDle~L~~~i~~~-----~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~-~~ 711 (993)
T PLN02414 639 KIVVVGTDA-KGNINIEELRKAAEAH-----KDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQ-VG 711 (993)
T ss_pred EEEEeccCC-CCCcCHHHHHHHHhcc-----CCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhc-cC
Confidence 999999975 6899999999999742 23689999999999999999997 5578899999999999998886 24
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCc-----eEEEEEeCCCcccc
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTG-----FGCLLIKKSVMGSL 386 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtG-----vG~LyVRk~~i~~L 386 (872)
..+..++++||+++|.||+|++ |.| +|+|++++.+...|
T Consensus 712 l~~p~~~GaD~~~~s~HK~f~~-P~G~GGPg~G~l~~~~~L~p~l 755 (993)
T PLN02414 712 LTSPGFIGADVCHLNLHKTFCI-PHGGGGPGMGPIGVKKHLAPFL 755 (993)
T ss_pred cCCccccCCCEEEecCCccCCc-CcccCCCCeeeEEEchhhcccC
Confidence 5666789999999999998776 665 99999999766555
No 44
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.75 E-value=1.8e-16 Score=193.93 Aligned_cols=203 Identities=15% Similarity=0.098 Sum_probs=149.3
Q ss_pred eecccCCCCCCcHHHH-HHhhhcccccHHHHHHhhccCcCcCCCc----hHHHHHHHHHHHHHhcCCCCCCCcEEEeCCH
Q 002866 151 VCLDYCGFGLFSYIQT-LHYWESSTFSLSEITANLSNHALYGGAE----KGTVEHDIKTRIMDHLNIPENEYGLVFTVSR 225 (872)
Q Consensus 151 IYLDyAAtgp~p~~Vi-eA~~e~~~F~ls~i~~nL~~~~~ygNps----S~~~ieeARerIA~lLgA~~dEY~VVFTsnA 225 (872)
.|++-+....+-+.|+ +.+.+.|.| ++.. ..|- |+ ..+.+.+.+..|++++|++..+ +.|+.++
T Consensus 79 ~~ig~G~y~~~~P~vi~~~i~~~~~~----~t~y----tPyQ-~EisQG~Leal~~~Qt~la~LtG~~~an--aSl~d~a 147 (954)
T PRK05367 79 SYIGQGYYGTHTPPVILRNILENPAW----YTAY----TPYQ-PEISQGRLEALLNFQTMVADLTGLEIAN--ASLLDEA 147 (954)
T ss_pred cccCCCCCCCcCcHHHHHHHHhCcch----hhcc----CCCC-hHHHHHHHHHHHHHHHHHHHHHCCChhh--ccccccH
Confidence 4566666655444544 555554444 1211 1222 22 2378889999999999998874 9999999
Q ss_pred HHHHHHHHhhCCCCCC--CeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCc
Q 002866 226 GSAFKLLAESYPFHTN--KKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 226 TeALnLVaeslpf~~G--d~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
|++.+.++.+++++++ ++|+++ +++|++. ..|+.+++..|++|+.++.+. + ++ . .++
T Consensus 148 TAa~ea~~~a~~~~~~~~~~vlv~-~~~hP~~~~v~~t~a~~~G~ev~~~~~~~-d--~~---------~-------~~~ 207 (954)
T PRK05367 148 TAAAEAMALAKRVSKSKSNRFFVD-DDVHPQTLDVLRTRAEPLGIEVVVGDAAK-A--LD---------H-------DDV 207 (954)
T ss_pred HHHHHHHHHhhhhccCCCCEEEEc-CccCHHHHHHHHHHHHhCCCEEEEecCcc-C--CC---------c-------ccE
Confidence 9999999999988875 787765 4456665 456777889999999998643 1 11 1 123
Q ss_pred eEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEccccc-----CCCCCCceEEE
Q 002866 303 GLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRV-----FGFDPTGFGCL 376 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~-----fG~~PtGvG~L 376 (872)
..++.+..|.+|.+.|++ +++.||++|++++|||.+.+.. +..+..++++||+++++||| ||+ | |+|+|
T Consensus 208 -~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~--~l~~pge~GaDi~vgs~qkfg~P~g~GG-P-~aGfl 282 (954)
T PRK05367 208 -FGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALT--LLTPPGEMGADIAVGSAQRFGVPMGFGG-P-HAAYF 282 (954)
T ss_pred -EEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhcc--CCCChhhcCCCEEEeeCcccCCCCCCCC-C-CEEEE
Confidence 445667789999999997 5678899999999999775443 34478999999999999999 787 6 79999
Q ss_pred EEeCCCcccccCC
Q 002866 377 LIKKSVMGSLQNQ 389 (872)
Q Consensus 377 yVRk~~i~~L~P~ 389 (872)
|+|++....|.+.
T Consensus 283 avr~~~~r~lpgr 295 (954)
T PRK05367 283 AVRDAYKRSMPGR 295 (954)
T ss_pred EECHHHHhhCCCC
Confidence 9999987777654
No 45
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.75 E-value=2e-16 Score=174.16 Aligned_cols=202 Identities=12% Similarity=0.105 Sum_probs=133.9
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccC-cCcCCCc----hHHHHHHHHHHHHHhcCCCCCCCcEEEeCC
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNH-ALYGGAE----KGTVEHDIKTRIMDHLNIPENEYGLVFTVS 224 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~-~~ygNps----S~~~ieeARerIA~lLgA~~dEY~VVFTsn 224 (872)
.=|||+++++++.+.+++++.+ +.....+. ...+... ....++++|++||+++|++. .++||+|
T Consensus 12 ~~YL~~~~~~~~~~~~~~~~~~--------~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~---~l~~~sG 80 (370)
T PRK05937 12 NDFLGFSRSDTLVHEVEKRYRL--------YCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---AFIVPSG 80 (370)
T ss_pred CCccCCCCCHHHHHHHHHHHHH--------hccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe---EEEECCh
Confidence 4599999999988888876432 11110000 0011111 23689999999999999953 4888888
Q ss_pred HHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceE
Q 002866 225 RGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGL 304 (872)
Q Consensus 225 ATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~L 304 (872)
.+..+ .++..+ .++|+.|++. ..+|.++....... .|..+.+ . .++.++|+++|....+ ..+.+.+
T Consensus 81 ~~a~~-~~~~~~-~~~~d~ii~d-~~~H~sv~~~~~~~--~~~~~~~---~----~~d~~~l~~~l~~~~~--~~~~~~~ 146 (370)
T PRK05937 81 YMANL-GLCAHL-SSVTDYVLWD-EQVHISVVYSLSVI--SGWHQSF---R----HNDLDHLESLLESCRQ--RSFGRIF 146 (370)
T ss_pred HHHHH-HHHHHh-CCCCCEEEEE-hhhhHHHHHHHHHc--CCceEEe---c----CCCHHHHHHHHHhhhc--cCCCcEE
Confidence 75443 333333 2456666654 45678886543332 2444332 1 3578999998874311 1235778
Q ss_pred EEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCC----CCC---CcEEEEcccccCCCCCCceEEE
Q 002866 305 FVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLS----LFR---PDFIITSFYRVFGFDPTGFGCL 376 (872)
Q Consensus 305 Va~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs----~l~---~DFlv~S~HK~fG~~PtGvG~L 376 (872)
|++++++|++|.++|++. .+.|+++|++++||++|++|+ ++.+.. .++ .|.+.+|++|+|| |.|.|+|
T Consensus 147 v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~--~g~~g~g~~~~~~~~~~~~~~~tlsK~~g--~~G~~vl 222 (370)
T PRK05937 147 IFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGI--FGDDGKGFCHSLGYENFYAVLVTYSKALG--SMGAALL 222 (370)
T ss_pred EEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccc--cCCCCCchHHhhCCCCCcEEEEechhhhh--cCceEEE
Confidence 899999999999999975 567899999999999999886 566653 222 2356688889998 7899988
Q ss_pred EEeC
Q 002866 377 LIKK 380 (872)
Q Consensus 377 yVRk 380 (872)
+.++
T Consensus 223 ~~~~ 226 (370)
T PRK05937 223 SSSE 226 (370)
T ss_pred cCHH
Confidence 7643
No 46
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.74 E-value=8e-17 Score=175.89 Aligned_cols=179 Identities=11% Similarity=0.037 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.++|+++|+++|+ + .|+||+|+|+|+.+++.++ .++|++|++.. ..|.++. ..++..|++++.+++++
T Consensus 44 ~~~~~l~~~la~~~g~--~--~i~~~~g~t~al~~~l~~~-~~~gd~Vl~~~-~~~~~~~---~~~~~~g~~~~~v~~~~ 114 (361)
T cd06452 44 PPIKDFHHDLAEFLGM--D--EARVTPGAREGKFAVMHSL-CEKGDWVVVDG-LAHYTSY---VAAERAGLNVREVPNTG 114 (361)
T ss_pred chHHHHHHHHHHHcCC--c--eEEEeCCHHHHHHHHHHHh-cCCCCEEEEcC-CcchHHH---HHHHhcCCEEEEEecCC
Confidence 3578999999999999 3 4999999999999999887 57899988763 3455443 34677899999999976
Q ss_pred C-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCC
Q 002866 277 P-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR 354 (872)
Q Consensus 277 p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~ 354 (872)
. +..++.+++++++....+ ...+++++|.+++.+|.||.+.|++ +++.|+++|+.+++|+|+..|. .++++.+++
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~-~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~--~~~~~~~~~ 191 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKD-EFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGR--MPVSGKELG 191 (361)
T ss_pred CCCcccCHHHHHHHHHHHhh-ccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCC--cCCCHHHcC
Confidence 3 237899999988864211 0013589999999999999999997 5567899999999999999886 578888889
Q ss_pred CcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 355 PDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+|++++|+||+|+. |.++|+|+++++.++.+..
T Consensus 192 ~d~~~~s~~K~l~~-~~~~G~l~~~~~~~~~l~~ 224 (361)
T cd06452 192 ADFIVGSGHKSMAA-SAPIGVLATTEEWADIVFR 224 (361)
T ss_pred CCEEEecCCccccC-CCCeEEEEECHHHHHHHhc
Confidence 99999999999987 7899999999888777654
No 47
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.74 E-value=6.5e-16 Score=173.79 Aligned_cols=174 Identities=11% Similarity=0.054 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-HHHHHHHcCcEEEEEec
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-MAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~~~~AkrkGaeV~~Vpv 274 (872)
.+.+.+.++.+++++|++++ .+++|+|+|+++..+..++.+.+|++|++. +..|.+... +...++..|++++.+|+
T Consensus 111 ~~~~~e~~~~la~l~g~~~~--~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~-~~~~~~~~~~~~~~~~~~G~~~~~v~~ 187 (447)
T PRK00451 111 LQAIFEYQTMICELTGMDVA--NASMYDGATALAEAALMAVRITKRKKVLVS-GAVHPEYREVLKTYLKGQGIEVVEVPY 187 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcc--eEEecCcHHHHHHHHHHHHHhcCCCEEEEe-CccCHHHHHHHHHHHHhCCcEEEEecC
Confidence 35667777899999999876 499999999999988888766788998775 345666543 44456678999999999
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEe--eccccCCCCCccCCCC
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLL--DAGSLGPKDMDSLGLS 351 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLV--DAAQ~aG~~mipLDLs 351 (872)
++ + .++.++|+++|.. +|++|++++. |.||.+.|++. .+.||++|+++++ |+.. +|. +. ...
T Consensus 188 ~~-~-~~d~~~l~~~i~~--------~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~-~g~--~~-~~~ 252 (447)
T PRK00451 188 ED-G-VTDLEALEAAVDD--------DTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVS-LGL--LK-PPG 252 (447)
T ss_pred CC-C-CCCHHHHHHhcCC--------CeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHH-hcc--CC-Ccc
Confidence 86 4 7899999888853 5899999987 88999999984 5678999999988 7654 343 22 235
Q ss_pred CCCCcEEEEccccc-----CCCCCCceEEEEEeCCCcccccCC
Q 002866 352 LFRPDFIITSFYRV-----FGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 352 ~l~~DFlv~S~HK~-----fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
++++|++++|+||| +|+ | |+|+++++++.++.+.+.
T Consensus 253 ~~~~D~~~~s~~k~~~~~~~~G-p-g~G~l~~~~~~~~~~~~~ 293 (447)
T PRK00451 253 EYGADIVVGEGQPLGIPLSFGG-P-YLGFFATRKKLVRQMPGR 293 (447)
T ss_pred cCCCCEEEECCCcCCCCCCCCC-C-CchHHHhhHHHHhhCCCC
Confidence 68999999999997 666 6 899999999988877654
No 48
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=8.3e-17 Score=182.43 Aligned_cols=162 Identities=12% Similarity=0.051 Sum_probs=130.0
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAK 268 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGae 268 (872)
++||. +++.++++|++.|+.. .+||+|+|+|+++++.++ +++||+||++. .+|.+.. .+...+++.|++
T Consensus 61 ~~~p~----~~~le~~lA~l~g~~~----av~~sSGt~Al~~al~~l-l~~Gd~Vi~~~-~~y~~t~~~~~~~l~~~Gi~ 130 (433)
T PRK08134 61 ISNPT----VAVLEERVAALEGGVG----AIATASGQAALHLAIATL-MGAGSHIVASS-ALYGGSHNLLHYTLRRFGIE 130 (433)
T ss_pred CcChH----HHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHH-hCCCCEEEEeC-CccHHHHHHHHHHHhhCCeE
Confidence 45554 6789999999999852 699999999999999988 88999988763 2343333 333345678999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+++++++ +.++++++|.. +|+||.+.+.+|.+|.++|++ +.+.||++|+.+++|++|+.|. ..
T Consensus 131 v~~vd~~------d~~~l~~~i~~--------~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~--~~ 194 (433)
T PRK08134 131 TTFVKPG------DIDGWRAAIRP--------NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPY--LL 194 (433)
T ss_pred EEEECCC------CHHHHHHhcCC--------CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccc--cC
Confidence 9998763 57888887753 699999999999999999998 5567899999999999999997 34
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeC
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKK 380 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk 380 (872)
..+ .+++|++++|+|||+|+ .| +|.+++..
T Consensus 195 ~pl-~~GaD~vv~S~tK~l~g--~g~~~gG~v~~~ 226 (433)
T PRK08134 195 RPF-EHGADLVYHSATKFLGG--HGTAIGGVLVDG 226 (433)
T ss_pred Cch-hcCCCEEEeccccccCC--CCCceEEEEEec
Confidence 444 68999999999999994 46 78887754
No 49
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.73 E-value=3e-15 Score=171.54 Aligned_cols=174 Identities=10% Similarity=0.044 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHH--HHhhCCCCCCC----eEEEecccCchhHHHHHHHHHHcCcEE
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKL--LAESYPFHTNK----KLLTMFDYESQSVNWMAQSAKEKGAKV 269 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnL--Vaeslpf~~Gd----~ILT~~DhEHnSVl~~~~~AkrkGaeV 269 (872)
.+.+.+.++.+++++|++.. .+.-++++++.+.. ++..+...+|+ +||+. +..|++.... ++..|+++
T Consensus 112 lel~~~~~~~la~l~G~~~~--~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~-~~~hp~~~~~---~~~~G~~v 185 (481)
T PRK04366 112 LELMYELQEWLKEITGMDAV--TLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVP-DSAHGTNPAS---AAMAGFKV 185 (481)
T ss_pred HHHHHHHHHHHHHHhCCCce--EEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEc-CCccHhHHHH---HHHcCCEE
Confidence 37889999999999999632 23333444444442 23333344554 77665 3356665533 46689999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccch-hcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAK-YSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i-~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+.+|++. ++.++.++|+++|.. +|++|++++ .|.||.+ .|++ +++.||++|++++||+||+++.- ..
T Consensus 186 v~v~~~~-~~~~D~e~L~~~i~~--------~t~~V~v~~-Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~-g~ 254 (481)
T PRK04366 186 VEIPSNE-DGLVDLEALKAAVGE--------DTAALMLTN-PNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAIL-GK 254 (481)
T ss_pred EEeecCC-CCCcCHHHHHhhccc--------CCeEEEEeC-CCCccccchHHHHHHHHHHHcCCEEEEEecChhhhc-cc
Confidence 9999974 578999999888853 588888887 4589987 5887 45778999999999999986631 23
Q ss_pred CCCCCCCCcEEEEcccccCCCCCC-----ceEEEEEeCCCccccc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPT-----GFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~Pt-----GvG~LyVRk~~i~~L~ 387 (872)
++..++++|++++++|||||. |. |+|+|+++++....|.
T Consensus 255 ~~~~~~GaD~~~~~~hK~l~~-P~g~Ggp~~G~l~~~~~~~~~lp 298 (481)
T PRK04366 255 ARPGDMGFDVVHLNLHKTFST-PHGGGGPGSGPVGVKEELAPFLP 298 (481)
T ss_pred CCccccCCCEEEEechhhcCC-CCCCCCCCeeeeeehhhhHhhCC
Confidence 577889999999999999886 54 5679999988766554
No 50
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=2e-16 Score=176.59 Aligned_cols=158 Identities=13% Similarity=0.079 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCch-hHHHHHHHHHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQ-SVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHn-SVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..++.++++|++.|+.. .|+| ++++.|+.++.. -+++||+||+.. ..|. ....+.+.+++.|++++.++..
T Consensus 55 ~~~~le~~lA~l~g~~~---~v~~-~sG~~ai~~~l~--~l~~Gd~Vlv~~-~~y~~~~~~~~~~~~~~G~~v~~v~~~- 126 (390)
T PRK08064 55 TREALEDIIAELEGGTK---GFAF-ASGMAAISTAFL--LLSKGDHVLISE-DVYGGTYRMITEVLSRFGIEHTFVDMT- 126 (390)
T ss_pred hHHHHHHHHHHHhCCCC---eEEE-CCHHHHHHHHHH--HhCCCCEEEEcc-CccchHHHHHHHHHHHcCCEEEEECCC-
Confidence 35689999999999863 3665 555778877765 357899987663 2344 3445556678889999998753
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
+.+++++++. ++|++|.+.+.+|.||.+.|++ +.+.||++|+.+++|+++..+....++ ++++
T Consensus 127 -----d~~~l~~~l~--------~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~---~~g~ 190 (390)
T PRK08064 127 -----NLEEVAQNIK--------PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL---DLGA 190 (390)
T ss_pred -----CHHHHHHhcC--------CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch---hhCC
Confidence 4677776664 3589999999999999999998 456789999999999998877521233 4689
Q ss_pred cEEEEcccccCCCCCCc--eEEEEEeC
Q 002866 356 DFIITSFYRVFGFDPTG--FGCLLIKK 380 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtG--vG~LyVRk 380 (872)
|+++.|+||||++ |.| .|+++++.
T Consensus 191 Divv~S~tK~~~G-~~~~laG~~v~~~ 216 (390)
T PRK08064 191 DVVLHSATKFLAG-HSDVLAGLAVVKD 216 (390)
T ss_pred cEEEeecceeccC-CccceeEEEEeCC
Confidence 9999999999988 777 47777654
No 51
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.71 E-value=1.3e-15 Score=163.85 Aligned_cols=167 Identities=13% Similarity=0.052 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....+.++.|++++|++ .++||+|+|+|+.+++..+.+++|++|++.. ..|.++.. .+...|++++.++++.
T Consensus 18 ~~~~~~~~~la~~~~~~----~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~-~~~~~~~~---~~~~~g~~~~~~~~~~ 89 (352)
T cd00616 18 PKVREFEKAFAEYLGVK----YAVAVSSGTAALHLALRALGIGPGDEVIVPS-FTFVATAN---AILLLGATPVFVDIDP 89 (352)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHcCCCCCCEEEeCC-cchHHHHH---HHHHcCCeEEEEecCC
Confidence 35678999999999973 3899999999999999998778899988763 34454432 3455799999999976
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCC-CCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLS-LFR 354 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs-~l~ 354 (872)
.++.++.+++++++. +++++|.+++ .+|...|++ ++..|+++|+.+++|++|+.|. ...+.. ...
T Consensus 90 ~~~~~d~~~l~~~i~--------~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~--~~~~~~~~~~ 156 (352)
T cd00616 90 DTYNIDPELIEAAIT--------PRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGA--TYKGRKVGTF 156 (352)
T ss_pred CcCCcCHHHHHHhcC--------cCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCC--eECCEEcccC
Confidence 457788999988774 2578888764 699999997 4567899999999999999886 222210 122
Q ss_pred CcEEEEccc--ccCCCCCCceEEEEEeC-CCcccc
Q 002866 355 PDFIITSFY--RVFGFDPTGFGCLLIKK-SVMGSL 386 (872)
Q Consensus 355 ~DFlv~S~H--K~fG~~PtGvG~LyVRk-~~i~~L 386 (872)
+|+.++|+| ||++. |.| |+++.++ +..+.+
T Consensus 157 ~d~~~~S~~~~K~~~~-~~g-g~~~~~~~~~~~~~ 189 (352)
T cd00616 157 GDAGAFSFHPTKNLTT-GEG-GAVVTNDEELAERA 189 (352)
T ss_pred cceeEEcCCCCCCCcc-cCc-eEEEECCHHHHHHH
Confidence 699999977 99865 333 5555553 444434
No 52
>PLN02452 phosphoserine transaminase
Probab=99.71 E-value=1.1e-15 Score=169.93 Aligned_cols=205 Identities=15% Similarity=0.126 Sum_probs=140.5
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHh----hcc-CcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe-C
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITAN----LSN-HALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT-V 223 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~n----L~~-~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT-s 223 (872)
.+|+=.+|=+.+|+.|++++.+ .+... +.- ...+-.+...++++++++.+.++++++ ++|.|+|. .
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~-------~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p-~~y~v~~l~G 78 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQA-------ELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIP-DNYEVLFLQG 78 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHH-------HHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEeC
Confidence 3555456666788999987532 11110 000 001123334579999999999999984 56888887 8
Q ss_pred CHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCC---ccCHHHHHHHHhhhhccCCCC
Q 002866 224 SRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTL---KLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 224 nATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g---~Id~edLe~~I~~~~rr~~~~ 300 (872)
++|.++..+..++- .+|++++.... -+= -..|.+.|++.|.....+...+ .. ..+.+++ . .++
T Consensus 79 sgt~~~ea~~~nl~-~~~~~~l~~~~-G~f-g~r~~~~a~~~g~~~~~~~~~~-~~~~~~~~~~~~----~------~~~ 144 (365)
T PLN02452 79 GASTQFAAIPLNLC-KPGDKADFVVT-GSW-SKKAAKEAKKYCKTNVIASGKD-EKYTKIPSVSEW----E------LTP 144 (365)
T ss_pred ccHHHHHHHHHhcC-CCCCeEEEEEC-CHH-HHHHHHHHHHhCCCcEEEecCC-CCCCCCCChHHc----C------CCC
Confidence 88999999988873 46777543311 111 1256677888887544442222 21 2344432 1 123
Q ss_pred CceEEEEeCccCcccch-hcHHHHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 002866 301 AAGLFVFPVQSRVTGAK-YSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIK 379 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i-~PLe~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVR 379 (872)
....|+++|..-.||+. .|++.+. ++.++|||+|++|+ .++|++++++|| +|+||.+| |.|+|++++|
T Consensus 145 ~~~~v~~~hnETstGv~~~~~~~i~-----~~~lvVDa~Ss~g~--~pidv~~~~v~~--~saqK~lG--P~Gl~~v~vr 213 (365)
T PLN02452 145 DAKFVHICANETIHGVEFKDYPDVG-----NVPLVADMSSNFLS--KPVDVSKYGVIY--AGAQKNVG--PSGVTIVIIR 213 (365)
T ss_pred CCcEEEECCCCCCCcEecCcccccC-----CCeEEEECCccccC--cccCHHHcCEEE--EecccccC--CCCeEEEEEc
Confidence 57899999999999995 8886553 38999999999998 699999999988 59999997 8899999999
Q ss_pred CCCccccc
Q 002866 380 KSVMGSLQ 387 (872)
Q Consensus 380 k~~i~~L~ 387 (872)
++.++.++
T Consensus 214 ~~~l~~~~ 221 (365)
T PLN02452 214 KDLIGNAR 221 (365)
T ss_pred HHHHhhcc
Confidence 99876654
No 53
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.70 E-value=5.2e-16 Score=176.98 Aligned_cols=214 Identities=15% Similarity=0.135 Sum_probs=148.4
Q ss_pred CceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 149 PKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 149 ~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
+.+|++|.|.+++|+.+++++.+ + +..+ .++. + .+........++.+++.+++++|+.. .+ +++|++.|
T Consensus 81 g~v~~tNlg~s~l~~~vieAv~~---~-~~~y-~~l~-~-~l~~g~~g~r~~~le~~lA~l~gae~---al-vv~sg~aA 149 (454)
T TIGR00474 81 GVVLHTNLGRAPLAEEAIEAVTD---A-ARGY-SNLE-Y-DLETGKRGSRYSHVEGLLCELTGAED---AL-VVNNNAAA 149 (454)
T ss_pred CcEEeccCCCCCCCHHHHHHHHH---H-Hhcc-cchh-c-cccccccchHHHHHHHHHHHHhCCCc---EE-EECCHHHH
Confidence 37899999999999999998643 1 0000 0110 0 01111123567899999999999953 35 46678889
Q ss_pred HHHHHhhCCCCCCCeEEEec-ccCc-hhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEE
Q 002866 229 FKLLAESYPFHTNKKLLTMF-DYES-QSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFV 306 (872)
Q Consensus 229 LnLVaeslpf~~Gd~ILT~~-DhEH-nSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa 306 (872)
+++++.. +.+|++||++. +|.| .....+...+++.|++++.++.+ ...+.++++++|. ++|++|.
T Consensus 150 i~l~l~~--l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~---~~~~l~dle~aI~--------~~T~lv~ 216 (454)
T TIGR00474 150 VLLALNT--LAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT---NRTHLKDYEDAIT--------ENTALLL 216 (454)
T ss_pred HHHHHHH--hCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC---CCCCHHHHHHhcC--------cCCEEEE
Confidence 9988865 57899988763 2211 11111224456789999888653 2357788888775 3699999
Q ss_pred EeCccCc--cc--chhcHH-HHHHHHHCCcEEEeeccc---------cCCCCCccCCCCCCCCcEEEEcccccCCCCCCc
Q 002866 307 FPVQSRV--TG--AKYSYQ-WMALAQQNHWHVLLDAGS---------LGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTG 372 (872)
Q Consensus 307 ~p~vSNv--TG--~i~PLe-~I~~Are~G~~VLVDAAQ---------~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtG 372 (872)
+.|.+|. +| .+.|++ ++..||++|+.+++|+++ .+++.....++.+.++|++++|+|||+|+ |.
T Consensus 217 ~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgG-p~- 294 (454)
T TIGR00474 217 KVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGG-PQ- 294 (454)
T ss_pred EEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCC-Ce-
Confidence 9999997 47 588997 567889999999999872 12221111255568999999999999988 74
Q ss_pred eEEEEEeCCCcccccC
Q 002866 373 FGCLLIKKSVMGSLQN 388 (872)
Q Consensus 373 vG~LyVRk~~i~~L~P 388 (872)
.|+++.+++.++.|+.
T Consensus 295 ~G~i~g~~~~i~~l~~ 310 (454)
T TIGR00474 295 AGIIVGKKELIERLKK 310 (454)
T ss_pred EEEEEECHHHHHhhhh
Confidence 8999999988876653
No 54
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.70 E-value=4.7e-16 Score=147.66 Aligned_cols=163 Identities=17% Similarity=0.125 Sum_probs=125.4
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT 278 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~ 278 (872)
++++|+.+++++|++.+ .++||+|+|+|+.+++.++. .+++++++... .|.+..+ ..++..|++++.++.+...
T Consensus 2 ~~~~~~~l~~~~~~~~~--~~~~~~~~t~a~~~~~~~~~-~~~~~v~~~~~-~~~~~~~--~~~~~~g~~~~~v~~~~~~ 75 (170)
T cd01494 2 LEELEEKLARLLQPGND--KAVFVPSGTGANEAALLALL-GPGDEVIVDAN-GHGSRYW--VAAELAGAKPVPVPVDDAG 75 (170)
T ss_pred HHHHHHHHHHHcCCCCC--cEEEeCCcHHHHHHHHHHhC-CCCCEEEEeec-ccceehh--hHHHhcCCEEEEeccCCCC
Confidence 46899999999985544 59999999999999999985 45788776532 3444543 4567789999999886532
Q ss_pred CccCHH--HHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccC---CCCC
Q 002866 279 LKLCST--DLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSL---GLSL 352 (872)
Q Consensus 279 g~Id~e--dLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipL---DLs~ 352 (872)
....+ ++++.. ...+++++.+++.+|.+|..+|++. .+.|+++|+++++|+++..+. ... +...
T Consensus 76 -~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~ 145 (170)
T cd01494 76 -YGGLDVAILEELK-------AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGA--SPAPGVLIPE 145 (170)
T ss_pred -ccchhhhhhhhcc-------ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccc--cccccccccc
Confidence 22221 332222 2357899999999999999999974 567799999999999998876 343 5777
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEEe
Q 002866 353 FRPDFIITSFYRVFGFDPTGFGCLLIK 379 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtGvG~LyVR 379 (872)
.++|+++.|+||+||+ .|+|+|++|
T Consensus 146 ~~~d~~~~s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 146 GGADVVTFSLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred ccCCEEEEEcccccCC--CceEEEEeC
Confidence 8899999999999995 599999986
No 55
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.67 E-value=1.3e-15 Score=168.21 Aligned_cols=195 Identities=14% Similarity=0.069 Sum_probs=141.2
Q ss_pred CCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhh
Q 002866 156 CGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAES 235 (872)
Q Consensus 156 AAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaes 235 (872)
=|.+++|+.+++++.+ ... .|.+ ..+.++++++.+++++|++ .++||+|+|+|+++++.+
T Consensus 20 ~g~s~~~~~v~~a~~~--------~~~------~~~~--~~~~~~~~~~~~a~~~g~~----~~~~~~g~t~al~~al~a 79 (363)
T TIGR01437 20 LGVSTVSDEVADAQKR--------GAQ------NYFE--IKELVNKTGEYIANLLGVE----DAVIVSSASAGIAQSVAA 79 (363)
T ss_pred CCCCCCCHHHHHHHHH--------HHh------cCCC--HHHHHHHHHHHHHHhhCCC----eEEEEcCHHHHHHHHHHH
Confidence 3555688889887543 111 1322 2467899999999999984 389999999999999988
Q ss_pred CCCCCCC---------------eEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCC
Q 002866 236 YPFHTNK---------------KLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 236 lpf~~Gd---------------~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~ 300 (872)
+ +++|| +|++...|..+-...+...+...|++++++++++ .+++++++++|..
T Consensus 80 l-~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~---~~d~~~le~ai~~-------- 147 (363)
T TIGR01437 80 V-ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYAN---ECSAEQLEAAITE-------- 147 (363)
T ss_pred H-hcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCC---CCCHHHHHHhcCh--------
Confidence 7 57777 6666532221110122344566799999888753 5899999998864
Q ss_pred CceEEE-EeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 002866 301 AAGLFV-FPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 301 ~T~LVa-~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
+|+++. ++..+|.+|.++|++ +.+.||++|+.+++|++|... +. .+..+++|++++|+||++++ |+ .|+|+.
T Consensus 148 ~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~---~~-~~~~~g~D~~~~S~~K~l~g-p~-~G~l~~ 221 (363)
T TIGR01437 148 KTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEED---LQ-KYYRLGADLVIYSGAKAIEG-PT-SGLVLG 221 (363)
T ss_pred hceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCc---hH-HHHHcCCCEEEEeCCcccCC-Cc-eEEEEE
Confidence 466544 555578999999997 556889999999999999732 11 12245799999999998877 88 799998
Q ss_pred eCCCcccccC
Q 002866 379 KKSVMGSLQN 388 (872)
Q Consensus 379 Rk~~i~~L~P 388 (872)
+++.++.+.+
T Consensus 222 ~~~~i~~~~~ 231 (363)
T TIGR01437 222 KKKYIEWVKL 231 (363)
T ss_pred cHHHHHHHHh
Confidence 8777776654
No 56
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.66 E-value=4.3e-15 Score=163.64 Aligned_cols=179 Identities=12% Similarity=0.051 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW- 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~- 276 (872)
.+.+.++.+|+++|+++ +++++|+++|+.+++.++ +++|+.|++.. .+|.+.. ..++..|++++.+|.+.
T Consensus 52 ~~~~~~e~lA~~~g~~~----~~i~~g~~~a~~~~~~~l-~~~gd~Vl~~~-~~h~s~~---~~~~~~g~~~~~~~~~~~ 122 (370)
T TIGR02539 52 PIHDFLEDLAEFLGMDE----ARVTHGAREGKFAVMHAL-CKEGDWVVLDG-LAHYTSY---VAAERAGLNVKEVPHTGH 122 (370)
T ss_pred HHHHHHHHHHHHhCCCc----eEEECChHHHHHHHHHHh-hCCCCEEEECC-cccHHHH---HHHHHcCCEEEEEecCCc
Confidence 57788999999999963 567899999999999988 47899988752 3455443 34677899999999753
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
+++.++.++|+++|...++ ....++++|++++.+|++|.+.|++ ++..|+++|+++++|++++.|. +++++...++
T Consensus 123 ~~~~~d~~~l~~~l~~~~~-~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~--~~~~~~~~~~ 199 (370)
T TIGR02539 123 PEYKVDPEGYGEVIEEVED-ESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGR--MPVSAKEIGA 199 (370)
T ss_pred ccCCcCHHHHHHHHHHhhh-ccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCC--cCCCHHHcCC
Confidence 2467899999998864211 0112578999999999999999997 5567899999999999999885 5777767789
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 356 DFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
|+++.|+||+||. +.++|+++++++.++.|...
T Consensus 200 di~v~s~sK~~~~-~g~~G~l~~~~~~i~~l~~~ 232 (370)
T TIGR02539 200 DFIVGSGHKSMAA-SGPCGVLGMSEEWEDIVLRK 232 (370)
T ss_pred CEEEeeCcccccC-CCCEEEEEECHHHHhhhccc
Confidence 9999999999986 66799999999988877643
No 57
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.65 E-value=4.8e-15 Score=162.85 Aligned_cols=212 Identities=11% Similarity=0.050 Sum_probs=150.4
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcC--CC----chHHHHHHHHHHHHHhcCCCCCCCcEEEeC
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYG--GA----EKGTVEHDIKTRIMDHLNIPENEYGLVFTV 223 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg--Np----sS~~~ieeARerIA~lLgA~~dEY~VVFTs 223 (872)
.++|.-+..+..++.++.+.... . .. +..|. .+ ...+..+++++.+++++|++.+ .++||.
T Consensus 22 ~~~l~~g~~~~~~p~~~~~~~~~-------~--~~--~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~--~v~~~~ 88 (398)
T cd00613 22 MSFLGSGTYKHNPPAVIKRNILE-------N--EF--YTAYTPYQPEISQGRLQALFELQTMLCELTGMDVA--NASLQD 88 (398)
T ss_pred cccccccccCCcCcHHHHHHhcc-------c--cC--cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCcc--ceeccC
Confidence 58888888887766666653221 1 01 11122 11 1246788999999999999765 388888
Q ss_pred CHHHHHHHHHhhCCCC--CCCeEEEecccCchhHHH-HHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCC
Q 002866 224 SRGSAFKLLAESYPFH--TNKKLLTMFDYESQSVNW-MAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 224 nATeALnLVaeslpf~--~Gd~ILT~~DhEHnSVl~-~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~ 300 (872)
|+|++.+.++....+. +|++|++. +..|.+... |....++.|++++.++++. .+.++.++|++++..
T Consensus 89 ~g~~~~~~~~~~~~~~~~~gd~Vl~~-~~~h~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~-------- 158 (398)
T cd00613 89 EATAAAEAAGLAAIRAYHKRNKVLVP-DSAHPTNPAVARTRGEPLGIEVVEVPSDE-GGTVDLEALKEEVSE-------- 158 (398)
T ss_pred chHHHHHHHHHHHHhcccCCCEEEEc-CccCcchHHHHHHhcccCCcEEEEeccCC-CCCcCHHHHHHhcCC--------
Confidence 7776655544443333 48888765 334555543 3333345679999999864 457888999887742
Q ss_pred CceEEEEeCccCcccchhcH-HH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCC-----Cce
Q 002866 301 AAGLFVFPVQSRVTGAKYSY-QW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDP-----TGF 373 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PL-e~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~P-----tGv 373 (872)
+|++|++++.+ .+|.+.|+ +. .+.|+++|+++++|++|..+. .+.+....++|++++|+|||+ . | .|+
T Consensus 159 ~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~--~~~~~~~~~~d~~~~s~~K~~-~-p~g~Ggp~~ 233 (398)
T cd00613 159 EVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT--GLKPPGEYGADIVVGNLQKTG-V-PHGGGGPGA 233 (398)
T ss_pred CeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEecccccc--CCCChHHcCCCEEEeeccccC-C-CCCCCCCce
Confidence 58999999875 79999996 75 567899999999999987765 466667789999999999998 3 4 368
Q ss_pred EEEEEeCCCcccccCC
Q 002866 374 GCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 374 G~LyVRk~~i~~L~P~ 389 (872)
|+||++++.++.+.+.
T Consensus 234 g~l~~~~~~~~~~~~~ 249 (398)
T cd00613 234 GFFAVKKELVRFLPGR 249 (398)
T ss_pred eEEEEhhhhHhhCCCC
Confidence 9999999887776543
No 58
>PRK04311 selenocysteine synthase; Provisional
Probab=99.65 E-value=4.5e-15 Score=169.83 Aligned_cols=208 Identities=17% Similarity=0.163 Sum_probs=147.1
Q ss_pred CceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCc-CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHA-LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~-~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
+.+|++|.+.+++|+.+++++.+ +.....+.. .+..-.....++.+++.+|+++|+. ..++++|++.
T Consensus 86 g~v~~tNlg~s~l~~~v~eav~~--------~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae----~a~vv~sgta 153 (464)
T PRK04311 86 GVVLHTNLGRALLSEAAIEAVTE--------AARGYSNLEYDLATGKRGSRDRALAALLCALTGAE----DALVVNNNAA 153 (464)
T ss_pred ccEEeccCCCCCCCHHHHHHHHH--------HHhcccccccchhhcccchHHHHHHHHHHHHhCCC----eEEEECCHHH
Confidence 47888888999999999998643 111100000 0000112356789999999999985 2567788889
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchh---HHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQS---VNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGL 304 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnS---Vl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~L 304 (872)
|+++++.++ .+|++||++.. +|.. ...+....++.|++++.++.. ...+.++++++|.. +|++
T Consensus 154 Al~l~l~~l--~~GdeVIvs~~-e~~~~ggs~~i~~~~~~~G~~l~~v~~~---~~t~~~dle~aI~~--------~Tkl 219 (464)
T PRK04311 154 AVLLALNAL--AAGKEVIVSRG-ELVEIGGAFRIPDVMRQAGARLVEVGTT---NRTHLRDYEQAINE--------NTAL 219 (464)
T ss_pred HHHHHHHHh--CCCCEEEEcch-hhhhcCcchhhHHHHHHCCcEEEEECCC---CCCCHHHHHHhcCc--------cCeE
Confidence 999988764 68999887632 2221 112334457789999988753 24578888888753 5899
Q ss_pred EEEeCccCc--cc--chhcHH-HHHHHHHCCcEEEeecccc-C--------CCCCccCCCC---CCCCcEEEEcccccCC
Q 002866 305 FVFPVQSRV--TG--AKYSYQ-WMALAQQNHWHVLLDAGSL-G--------PKDMDSLGLS---LFRPDFIITSFYRVFG 367 (872)
Q Consensus 305 Va~p~vSNv--TG--~i~PLe-~I~~Are~G~~VLVDAAQ~-a--------G~~mipLDLs---~l~~DFlv~S~HK~fG 367 (872)
+.+.|.+|. +| ...|++ +++.||++|+.+++|+++. + ++ .+ ++. ++++|++++|+|||+|
T Consensus 220 V~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~--~p-~~~~~l~~GaDiv~fSg~K~Lg 296 (464)
T PRK04311 220 LLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPD--EP-TVQELLAAGVDLVTFSGDKLLG 296 (464)
T ss_pred EEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCC--CC-chhhHHhcCCcEEEecCccccc
Confidence 999999996 55 568997 5678899999999999531 1 11 12 333 3799999999999999
Q ss_pred CCCCceEEEEEeCCCccccc
Q 002866 368 FDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 368 ~~PtGvG~LyVRk~~i~~L~ 387 (872)
+ | ..|++++|++.++.|+
T Consensus 297 G-p-~~G~i~g~~~li~~l~ 314 (464)
T PRK04311 297 G-P-QAGIIVGKKELIARLK 314 (464)
T ss_pred C-C-ceEEEEEcHHHHHHHh
Confidence 8 7 4899999998887775
No 59
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.61 E-value=3.5e-14 Score=164.60 Aligned_cols=179 Identities=15% Similarity=0.072 Sum_probs=129.6
Q ss_pred CCCchHHHHHHHHHHHHHhcCCC-----------CCCCcEEEeCCHHHHHHH---HHhhCCCC-----------------
Q 002866 191 GGAEKGTVEHDIKTRIMDHLNIP-----------ENEYGLVFTVSRGSAFKL---LAESYPFH----------------- 239 (872)
Q Consensus 191 gNpsS~~~ieeARerIA~lLgA~-----------~dEY~VVFTsnATeALnL---Vaeslpf~----------------- 239 (872)
..|....+...+-.-++++++.. ++...-+||+|+|+|+-+ +|+...+.
T Consensus 123 ~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 123 TSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred cCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 45555677777888888888532 223346899999998654 33322110
Q ss_pred -----CCCeEEEecccCchhHHHHHHHHHHcCc---EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCc-
Q 002866 240 -----TNKKLLTMFDYESQSVNWMAQSAKEKGA---KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQ- 310 (872)
Q Consensus 240 -----~Gd~ILT~~DhEHnSVl~~~~~AkrkGa---eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~v- 310 (872)
++..|+++ +.+|.|+. +.++..|+ +++.||++. +++++.++|+++|....+ .++++|++.++
T Consensus 203 ~~~~~~~~~v~~S-~~~H~S~~---kaa~~lglg~~~v~~vp~d~-~g~~d~~~L~~~i~~~~~----~g~~~~~vvata 273 (522)
T TIGR03799 203 KHYGYDGLAILVS-ERGHYSLG---KAADVLGIGRDNLIAIKTDA-NNRIDVDALRDKCAELAE----QNIKPLAIVGVA 273 (522)
T ss_pred hhccCCceEEEEC-CCchHHHH---HHHHHcCCCcccEEEEEeCC-CCcCCHHHHHHHHHHHHH----CCCCcEEEEEEe
Confidence 01124444 56788775 44555677 799999986 689999999999975321 24667777755
Q ss_pred -cCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCC-----CCCC-CCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 311 -SRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLG-----LSLF-RPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 311 -SNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLD-----Ls~l-~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
+++||++.||+. ...|+++|+++||||||.++. +..+ +..+ ++|++++|+|||+++ |.|+|+||+|+.
T Consensus 274 Gtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~--~~~~~~r~~l~gle~aDSit~d~HK~l~~-P~g~G~llvr~~ 349 (522)
T TIGR03799 274 GTTETGNIDPLDEMADIAQELGCHFHVDAAWGGAT--LLSNTYRHLLKGIERADSVTIDAHKQLYV-PMGAGMVLFKDP 349 (522)
T ss_pred cCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHH--HhCHHHHHHhcCchhCCEEEEChhhcCCc-CcccEEEEEeCH
Confidence 568999999985 567899999999999998876 3444 4554 899999999999887 999999999975
No 60
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=4.5e-14 Score=157.60 Aligned_cols=205 Identities=14% Similarity=0.130 Sum_probs=167.0
Q ss_pred CCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhh
Q 002866 156 CGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAES 235 (872)
Q Consensus 156 AAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaes 235 (872)
-|=++.++.|+.++.. .+ ..+-.|....++.++++.+..+|+++ +.+.++++.++|.|+...+.+
T Consensus 11 PGP~~v~~~V~~am~~-----------~~---~~h~s~~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~s 75 (383)
T COG0075 11 PGPVPVPPRVLLAMAR-----------PM---VGHRSPDFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVAS 75 (383)
T ss_pred CCCCCCCHHHHHHhcC-----------CC---CCCCCHHHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHh
Confidence 3445677888877432 11 11334555688999999999999997 334678889999999998888
Q ss_pred CCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCccc
Q 002866 236 YPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTG 315 (872)
Q Consensus 236 lpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG 315 (872)
+- .+||++|+...-. =-..|.+.+++.|+++..+...| .-.+++++++++|.+ ++..++|+++|.-.-||
T Consensus 76 l~-~pgdkVLv~~nG~--FG~R~~~ia~~~g~~v~~~~~~w-g~~v~p~~v~~~L~~------~~~~~~V~~vH~ETSTG 145 (383)
T COG0075 76 LV-EPGDKVLVVVNGK--FGERFAEIAERYGAEVVVLEVEW-GEAVDPEEVEEALDK------DPDIKAVAVVHNETSTG 145 (383)
T ss_pred cc-CCCCeEEEEeCCh--HHHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhc------CCCccEEEEEeccCccc
Confidence 73 6899987653210 01478899999999999999998 467899999999973 35688999999999999
Q ss_pred chhcHHHH-HHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 316 AKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 316 ~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+++|++.| +.++++|.+++|||++++|. +++++.++++|+++.+.+|.++. |.|+|++.++++..+.++.
T Consensus 146 vlnpl~~I~~~~k~~g~l~iVDaVsS~Gg--~~~~vd~wgiDv~itgSQK~l~~-PPGla~v~~S~~a~e~~~~ 216 (383)
T COG0075 146 VLNPLKEIAKAAKEHGALLIVDAVSSLGG--EPLKVDEWGIDVAITGSQKALGA-PPGLAFVAVSERALEAIEE 216 (383)
T ss_pred ccCcHHHHHHHHHHcCCEEEEEecccCCC--cccchhhcCccEEEecCchhccC-CCccceeEECHHHHHHHhc
Confidence 99999865 56799999999999999886 69999999999999999999999 8899999999998877753
No 61
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.58 E-value=1.7e-14 Score=160.56 Aligned_cols=165 Identities=10% Similarity=0.083 Sum_probs=126.5
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccCC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~p 277 (872)
.++.++++++++|++ + ++++++++.|++++.. + +++||+||+... .+.+.. .|...+++.|+++++++..
T Consensus 49 ~~~le~~la~l~g~~---~-~l~~~sG~~al~~~l~-l-l~~Gd~Vl~~~~-~y~~~~~~~~~~~~~~G~~v~~vd~~-- 119 (378)
T TIGR01329 49 RTALESLLAKLDKAD---R-AFAFSSGMAALDVITR-L-LNNGDEIIAGDD-LYGGTDRLLTQVVPRSGVVVVHVDTT-- 119 (378)
T ss_pred HHHHHHHHHHHhCCC---c-EEEECCHHHHHHHHHH-H-hCCCCEEEEcCC-CchHHHHHHHHHHHHcCcEEEEeCCC--
Confidence 578999999999983 2 4455556679998776 3 689999887632 344443 4555677889999988753
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCc
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPD 356 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~D 356 (872)
+.++++++|. ++|++|.+.+.+|.+|.++|++ +++.||++|+.+++|++++.|.. ...+ .+++|
T Consensus 120 ----d~~~le~~i~--------~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~--~~~l-~~g~D 184 (378)
T TIGR01329 120 ----DLDKVKAALG--------PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL--CNPL-ELGAD 184 (378)
T ss_pred ----CHHHHHHhcC--------cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc--CChh-hcCCc
Confidence 5678877774 3689999999999999999998 56788999999999999987752 2223 45899
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeCCCc-ccccC
Q 002866 357 FIITSFYRVFGFDPTG--FGCLLIKKSVM-GSLQN 388 (872)
Q Consensus 357 Flv~S~HK~fG~~PtG--vG~LyVRk~~i-~~L~P 388 (872)
++++|+||++++ |.| .|+++++++.+ +.+.+
T Consensus 185 i~v~S~tK~l~G-~~~~~~G~v~~~~~~~~~~~~~ 218 (378)
T TIGR01329 185 IVYHSATKFLAG-HSDVMAGVLAVKGEEIAKKVYF 218 (378)
T ss_pred EEEEecceeccC-CccceeEEEEeCcHHHHHHHHH
Confidence 999999999887 777 89999976543 54543
No 62
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.58 E-value=1.4e-14 Score=155.16 Aligned_cols=169 Identities=12% Similarity=0.011 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.++++++|+++|++. .+++|+|+|+|+..++.++ .++|++|++.. ..|.++.... ...|+++++++.++
T Consensus 59 g~i~~~~~~~A~~~ga~~---~~~~~~Gst~a~~~~l~al-~~~gd~Vlv~~-~~h~s~~~~~---~~~g~~~~~v~~~~ 130 (294)
T cd00615 59 GPIKEAQELAARAFGAKH---TFFLVNGTSSSNKAVILAV-CGPGDKILIDR-NCHKSVINGL---VLSGAVPVYLKPER 130 (294)
T ss_pred hHHHHHHHHHHHHhCCCC---EEEEcCcHHHHHHHHHHHc-CCCCCEEEEeC-CchHHHHHHH---HHCCCEEEEecCcc
Confidence 578999999999999852 4666999999999998887 57899988763 3566665433 34689999887754
Q ss_pred CC-----CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCC---CCcc
Q 002866 277 PT-----LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPK---DMDS 347 (872)
Q Consensus 277 p~-----g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~---~mip 347 (872)
.. +.++.+++++++... +++++|+++.. |.+|+.+|++ +++.||++|+.+++|+|+.+.. ...+
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~------~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~ 203 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEH------PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILP 203 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhC------CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccC
Confidence 32 368999999988642 35888888865 7899999997 5578899999999999987521 1135
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
.+....++|+++.|+||++++ |++.|+|++++.
T Consensus 204 ~~~~~~~~div~~S~hK~l~g-~~~~~~l~~~~~ 236 (294)
T cd00615 204 SSAAMAGADIVVQSTHKTLPA-LTQGSMIHVKGD 236 (294)
T ss_pred cchhhcCCcEEEEchhcccch-HhHHHHHHhCCC
Confidence 555567899999999999987 888899988776
No 63
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.58 E-value=3.2e-14 Score=156.38 Aligned_cols=171 Identities=16% Similarity=0.109 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....++|++||+++|++ + ++.++|+++|++.+..++ +++||+|++. +.+|.++......+ +.+...++
T Consensus 83 ~~~~~le~~ia~~~g~~-~---~ii~~~~~~a~~~~~~~l-~~~gd~vi~~-~~~~~s~~~~~~~~---~~~~~~~~--- 150 (393)
T TIGR01822 83 DIHKELEAKIAAFLGTE-D---TILYASCFDANGGLFETL-LGAEDAIISD-ALNHASIIDGVRLC---KAKRYRYA--- 150 (393)
T ss_pred HHHHHHHHHHHHHhCCC-c---EEEECchHHHHHHHHHHh-CCCCCEEEEe-ccccHHHHHHHHhc---CCceEEeC---
Confidence 46688999999999983 2 455578899999999888 6899998876 44677776544433 33332221
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCc-------cC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMD-------SL 348 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mi-------pL 348 (872)
.++.++|++.|....+ ...+|++|++++++|+||.+.|++ +++.|+++|+++++|++|..|.... .+
T Consensus 151 ---~~d~~~l~~~i~~~~~--~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~ 225 (393)
T TIGR01822 151 ---NNDMADLEAQLKEARA--AGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELC 225 (393)
T ss_pred ---CCCHHHHHHHHHhhhh--cCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhc
Confidence 2678999988874211 123689999999999999999997 4567899999999999997664100 12
Q ss_pred CCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 349 GLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++. .++|++++|+||++++ +. .|+++.+++.++.+.
T Consensus 226 ~~~-~~~di~~~s~sK~l~g-~r-~G~~~~~~~~~~~l~ 261 (393)
T TIGR01822 226 GVM-GRVDIITGTLGKALGG-AS-GGFTTARKEVVELLR 261 (393)
T ss_pred CCC-CCCeEEEEEChHHhhC-CC-cEEEEeCHHHHHHHH
Confidence 332 2689999999999986 54 599998888776664
No 64
>PLN02880 tyrosine decarboxylase
Probab=99.57 E-value=1.6e-12 Score=149.95 Aligned_cols=230 Identities=13% Similarity=0.016 Sum_probs=150.3
Q ss_pred hHHHHHhhcccCCCC---ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC
Q 002866 135 KIDQLRANEYLHLSP---KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN 211 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~---~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg 211 (872)
.++.+.+.-.|.... .-|+.|--+++.+..++-.+.. ..+..+. ......|....+..++=+-+++++|
T Consensus 65 ~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~------~~~n~~~--~~~~~sp~~~~lE~~vi~wl~~l~g 136 (490)
T PLN02880 65 VLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLS------AGLNIVG--FSWITSPAATELEMIVLDWLAKLLN 136 (490)
T ss_pred HHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHH------HhhccCC--cccccCcccHHHHHHHHHHHHHHhC
Confidence 445555433454432 4566666666656555543210 1111111 0112456666788889999999999
Q ss_pred CCCCC-----CcEEEeCCHHHHHHHH---HhhC-----CCCC-CCeEEEecccCchhHHHHHHHHHHcCc---EEEEEec
Q 002866 212 IPENE-----YGLVFTVSRGSAFKLL---AESY-----PFHT-NKKLLTMFDYESQSVNWMAQSAKEKGA---KVYSAWF 274 (872)
Q Consensus 212 A~~dE-----Y~VVFTsnATeALnLV---aesl-----pf~~-Gd~ILT~~DhEHnSVl~~~~~AkrkGa---eV~~Vpv 274 (872)
.+.+. -.-+||+|+|+|+-+. |+.. .+.. ..-++...+.-|.|+. +.|.-.|+ .|+.||+
T Consensus 137 ~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~---Kaa~~lGlg~~~v~~Vp~ 213 (490)
T PLN02880 137 LPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQ---KACQIAGIHPENCRLLKT 213 (490)
T ss_pred CCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHH---HHHHHcCCCHHHEEEeec
Confidence 97531 1478999999986442 2211 1111 1224444455577665 33444676 3788998
Q ss_pred cC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccC----
Q 002866 275 KW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSL---- 348 (872)
Q Consensus 275 d~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipL---- 348 (872)
+. .+++++.+.|++.|.+.++ .....-+|+-++-+-.||.+-|++. ...|+++|+++|||||+.++. ...
T Consensus 214 d~~~~~~md~~~L~~~i~~~~~--~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~--~~~~~~~ 289 (490)
T PLN02880 214 DSSTNYALAPELLSEAISTDLS--SGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSA--CICPEYR 289 (490)
T ss_pred CCCcCCcCCHHHHHHHHHHHHH--CCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHH--HhCHHHH
Confidence 74 3578999999999975432 2223567888888899999999985 567899999999999987763 211
Q ss_pred -CCCC-CCCcEEEEcccccCCCCCCceEEEEEeC
Q 002866 349 -GLSL-FRPDFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 349 -DLs~-l~~DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
.+.. .++|++++++|||++. |.|+|+||+|+
T Consensus 290 ~~l~gie~aDSit~d~HKwl~~-P~~~g~llvr~ 322 (490)
T PLN02880 290 HYIDGVEEADSFNMNAHKWFLT-NFDCSLLWVKD 322 (490)
T ss_pred HHhcCchhcCEEEECchhhcCC-CccEEEEEEeC
Confidence 2444 3799999999999988 99999999996
No 65
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.57 E-value=3.1e-14 Score=160.04 Aligned_cols=166 Identities=10% Similarity=0.026 Sum_probs=129.2
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCc
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGA 267 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGa 267 (872)
.++||.. +..-++||++-|+. ..+++++++.|++.++.++ +++||+||+... .|.... .+.+.+++.|+
T Consensus 58 R~~nPt~----~~le~~la~LEg~~----~a~~~~SGmaAi~~~~~~l-l~~GD~Vv~~~~-~Yg~t~~l~~~~l~~~Gi 127 (395)
T PRK08114 58 RRGTLTH----FSLQEAMCELEGGA----GCALYPCGAAAVANAILAF-VEQGDHVLMTGT-AYEPTQDFCSKILSKLGV 127 (395)
T ss_pred CCCChhH----HHHHHHHHHHhCCC----eEEEEhHHHHHHHHHHHHH-cCCCCEEEEeCC-CcHHHHHHHHHHHHhcCc
Confidence 4578863 34566888888873 2566777999999988887 789999887643 333333 33455788899
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHC--CcEEEeeccccCCCC
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQN--HWHVLLDAGSLGPKD 344 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~--G~~VLVDAAQ~aG~~ 344 (872)
+|.+++. .+.++++++|.. +|+||.+.+.+|++|.+.||+ +++.||++ |+.++||++++.|.
T Consensus 128 ~v~~vd~------~d~~~l~~~l~~--------~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~- 192 (395)
T PRK08114 128 TTTWFDP------LIGADIAKLIQP--------NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGV- 192 (395)
T ss_pred EEEEECC------CCHHHHHHhcCC--------CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCcccc-
Confidence 9998763 256778877752 589999999999999999998 55678987 49999999999996
Q ss_pred CccCCCCCCCCcEEEEcccccCCCCCC--ceEEEEEeCCC
Q 002866 345 MDSLGLSLFRPDFIITSFYRVFGFDPT--GFGCLLIKKSV 382 (872)
Q Consensus 345 mipLDLs~l~~DFlv~S~HK~fG~~Pt--GvG~LyVRk~~ 382 (872)
-++..++++|+++.|+|||+++ |. +.|+++.+++.
T Consensus 193 --~~~pl~~GaDivv~S~tKyl~G-hsdv~~G~v~~~~~~ 229 (395)
T PRK08114 193 --LFKALDFGIDISIQAGTKYLVG-HSDAMIGTAVANARC 229 (395)
T ss_pred --ccCHHHcCCcEEEEcCcccccC-CCcceeEEEEcCHHH
Confidence 3888889999999999999888 65 77877765543
No 66
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.56 E-value=5.2e-14 Score=160.03 Aligned_cols=161 Identities=11% Similarity=0.060 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+..++++|+++|+. +.|+|++|+ +|+.+++.++ +++||+||++ .++|.+. ..+.+.+++.|+++.+++ +.
T Consensus 70 t~~~le~~la~l~g~~---~~v~fsSG~-~Ai~~al~~l-l~~Gd~VI~~-~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~ 142 (437)
T PRK05613 70 TVEALENRIASLEGGV---HAVAFASGQ-AAETAAILNL-AGAGDHIVTS-PRLYGGTETLFLVTLNRLGIEVTFVE-NP 142 (437)
T ss_pred HHHHHHHHHHHHhCCC---eEEEeCCHH-HHHHHHHHHh-cCCCCEEEEC-CCccHHHHHHHHHHHHhcCeEEEEEC-CC
Confidence 3578999999999984 357777766 7877777776 6889998876 3455555 334466778899999987 21
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
.+.++++++|.. +|++|.+.+.+|.+|.++||+. .+.||++|+.+++|++|+.|.. .+.-++++
T Consensus 143 ----~d~e~l~~~l~~--------~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~---~~p~~~Ga 207 (437)
T PRK05613 143 ----DDPESWQAAVQP--------NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL---VRPLELGA 207 (437)
T ss_pred ----CCHHHHHHhCCc--------cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc---cChHHhCC
Confidence 267888877753 5888888899999999999985 5678999999999999988852 33335799
Q ss_pred cEEEEcccccCCCCCCceEEEEEeC
Q 002866 356 DFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
|++++|+|||+|+.-.|+|.+++..
T Consensus 208 Divv~S~~K~l~G~gd~~gG~vv~~ 232 (437)
T PRK05613 208 DVVVASLTKFYTGNGSGLGGVLIDG 232 (437)
T ss_pred CEEEeeccceecCCCcceeEEEEec
Confidence 9999999999985114568888744
No 67
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.55 E-value=3.6e-14 Score=157.97 Aligned_cols=173 Identities=10% Similarity=0.021 Sum_probs=122.1
Q ss_pred HHHHH-HHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-H-HHHHHHcCcEEEEEe
Q 002866 197 TVEHD-IKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-M-AQSAKEKGAKVYSAW 273 (872)
Q Consensus 197 ~~iee-ARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~-~~~AkrkGaeV~~Vp 273 (872)
+.+++ +|+.+++++|++.. .|+||+ +|+|+.+++.++ +++||+|++.. .+|++... + .......|+++..++
T Consensus 70 ~~~e~~~~~~la~~~g~~~~--~i~~~s-gt~al~~~l~~l-~~~gd~Vl~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (416)
T PRK00011 70 DVVEQLAIDRAKELFGAEYA--NVQPHS-GSQANAAVYFAL-LKPGDTILGMD-LAHGGHLTHGSPVNFSGKLYNVVSYG 144 (416)
T ss_pred HHHHHHHHHHHHHHhCCCce--eeecCC-chHHHHHHHHHh-cCCCCEEEEec-cccCCccccccccccccceeeEeecC
Confidence 45555 89999999999754 366665 588999999988 78999988653 23443321 1 111234578888888
Q ss_pred ccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCC---CccCC
Q 002866 274 FKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKD---MDSLG 349 (872)
Q Consensus 274 vd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~---mipLD 349 (872)
++..++.++.++++++|... ++++|.++. +.+|...|++. .+.|+++|+++++|++|++|.- ..+.+
T Consensus 145 ~~~~~~~~d~~~l~~~i~~~-------~~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~ 215 (416)
T PRK00011 145 VDEETGLIDYDEVEKLALEH-------KPKLIIAGA--SAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSP 215 (416)
T ss_pred cCcccCCcCHHHHHHHHHhc-------CCCEEEECC--CcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCC
Confidence 87545789999999988631 477887753 45788889974 5678999999999999877641 01344
Q ss_pred CCCCCCcEEEEcccccCCCCCCceEEEEEe-CCCccccc
Q 002866 350 LSLFRPDFIITSFYRVFGFDPTGFGCLLIK-KSVMGSLQ 387 (872)
Q Consensus 350 Ls~l~~DFlv~S~HK~fG~~PtGvG~LyVR-k~~i~~L~ 387 (872)
+. ++|++++|+||++++ |.|. +++.+ ++..+.++
T Consensus 216 ~~--~~di~~~S~~K~l~g-~~gg-~i~~~~~~~~~~l~ 250 (416)
T PRK00011 216 VP--HADVVTTTTHKTLRG-PRGG-LILTNDEELAKKIN 250 (416)
T ss_pred CC--CCcEEEecCCcCCCC-CCce-EEEeCCHHHHHHHH
Confidence 54 789999999999876 7764 44444 45555443
No 68
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.52 E-value=1e-13 Score=153.03 Aligned_cols=211 Identities=12% Similarity=0.006 Sum_probs=135.1
Q ss_pred cCCCCCCcHHHHHHhhhcccccHHHHH-HhhccCcCcCCCchHHHHH-HHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHH
Q 002866 155 YCGFGLFSYIQTLHYWESSTFSLSEIT-ANLSNHALYGGAEKGTVEH-DIKTRIMDHLNIPENEYGLVFTVSRGSAFKLL 232 (872)
Q Consensus 155 yAAtgp~p~~VieA~~e~~~F~ls~i~-~nL~~~~~ygNpsS~~~ie-eARerIA~lLgA~~dEY~VVFTsnATeALnLV 232 (872)
+++-+++++.|.+++.+. .. ..+. .+.. ...|+.......++ .+|+.+++++|++.. .|++| ++|+|+.++
T Consensus 25 ~~~~~~~~~~v~~a~~~~--~~-~~~~~g~~~-~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~--~v~~~-sgt~a~~~~ 97 (402)
T cd00378 25 IASENFTSPAVMEAMGSD--LT-NKYAEGYPG-KRYYGGCEYVDEIEDLAIERAKKLFGAEYA--NVQPH-SGSQANLAV 97 (402)
T ss_pred eccCCcCCHHHHHHhccc--cc-ccccCCCCC-CcccCCchHHHHHHHHHHHHHHHHhCCCce--eeecC-CcHHHHHHH
Confidence 456667788888875421 00 0000 0000 01121111123344 478889999999753 35555 568999999
Q ss_pred HhhCCCCCCCeEEEecccCchhHHHHHH--HHHHcCcEEEEEeccCC--CCccCHHHHHHHHhhhhccCCCCCceEEEEe
Q 002866 233 AESYPFHTNKKLLTMFDYESQSVNWMAQ--SAKEKGAKVYSAWFKWP--TLKLCSTDLRKQISSKKRRKKDSAAGLFVFP 308 (872)
Q Consensus 233 aeslpf~~Gd~ILT~~DhEHnSVl~~~~--~AkrkGaeV~~Vpvd~p--~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p 308 (872)
+.++ +++||+|++.. .+|.+...... .++..|+++..++++.. ++.++.+++++++.. ++++++.++
T Consensus 98 l~~l-~~~Gd~Vl~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~-------~~~~~v~~~ 168 (402)
T cd00378 98 YFAL-LEPGDTIMGLD-LSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE-------FKPKLIVAG 168 (402)
T ss_pred HHHh-cCCCCEEEEec-CccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh-------CCCCEEEec
Confidence 9998 68999987653 23343322211 24557888888877654 578999999998853 247788776
Q ss_pred CccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCC---CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcc
Q 002866 309 VQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKD---MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 309 ~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~---mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~ 384 (872)
+. .+|+..|++ ++..|+++|+++++|++|+.|.. ..+.++. ++|++++|+||+|++ |.|.++++.+++..+
T Consensus 169 ~~--~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l~G-~~gg~i~~~~~~~~~ 243 (402)
T cd00378 169 AS--AYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRG-PRGGLILTRKGELAK 243 (402)
T ss_pred Cc--ccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCCCC-CCceEEEeccHHHHH
Confidence 54 457888997 55678999999999999876530 0133444 689999999999966 777555543336655
Q ss_pred cc
Q 002866 385 SL 386 (872)
Q Consensus 385 ~L 386 (872)
.+
T Consensus 244 ~l 245 (402)
T cd00378 244 KI 245 (402)
T ss_pred HH
Confidence 54
No 69
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.52 E-value=2.1e-13 Score=152.17 Aligned_cols=171 Identities=10% Similarity=0.004 Sum_probs=127.0
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.+|||. .....++||++.|+. .+++|+|+++|+.+++.++ +++||+||+....-+.....+...+++.|++
T Consensus 46 r~gnPt----~~~lE~~lA~l~g~~----~~~~~~sG~~Ai~~al~al-l~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~ 116 (377)
T TIGR01324 46 RRGTLT----HFALQDAMCELEGGA----GCYLYPSGLAAVTNSILAF-VKAGDHVLMVDSAYEPTRYFCDIVLKRMGVD 116 (377)
T ss_pred CCCCcc----HHHHHHHHHHHhCCC----cEEEECcHHHHHHHHHHHh-cCCCCEEEEcCCCcHHHHHHHHHHHHhcCcE
Confidence 357775 356788999999974 3889999999999999888 7899998865322123222222345667998
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+..++.. +.++++++|. ++|++|.+.+.+|.+|.+.|++ +++.||++|+++++|++++.|. .
T Consensus 117 v~~~d~~------~~e~l~~~i~--------~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~--~- 179 (377)
T TIGR01324 117 ITYYDPL------IGEDIATLIQ--------PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGL--L- 179 (377)
T ss_pred EEEECCC------CHHHHHHhcC--------CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccc--c-
Confidence 8876532 1256766664 3699999999999999999997 5578899999999999999886 2
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSL 386 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L 386 (872)
.+.-++++|+++.|++||+|+ +.+ .|+++.+++.++.+
T Consensus 180 ~~pl~~gaDivv~S~tK~l~G-~~d~~gG~v~~~~~~~~~l 219 (377)
T TIGR01324 180 FKPLEHGVDISIQAGTKYLVG-HSDIMIGTVVANARTWDQL 219 (377)
T ss_pred cCccccCceEEEecCceeccC-CCCceEEEEEeCHHHHHHH
Confidence 333457999999999999987 554 46677666544433
No 70
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.51 E-value=3.7e-13 Score=150.95 Aligned_cols=163 Identities=17% Similarity=0.117 Sum_probs=124.3
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchh-HHHHHHHHHHcCc
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQS-VNWMAQSAKEKGA 267 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnS-Vl~~~~~AkrkGa 267 (872)
.|+||.. ...+++||++.|+ + .+++|+|+++|+.++..++ +++||+|++... .+.. +..+...+.+.|+
T Consensus 49 R~~npt~----~~Le~~lA~leg~--e--~ivvt~gg~~Ai~~~l~al-l~~Gd~Il~~~~-~y~~~~~~~~~~~~~~gi 118 (388)
T PRK08861 49 RSGNPNR----GLLEQTLSELESG--K--GAVVTNCGTSALNLWVSAL-LGPDDLIVAPHD-CYGGTYRLFNTRANKGDF 118 (388)
T ss_pred CCCCchH----HHHHHHHHHHhCC--C--eEEEECCHHHHHHHHHHHH-cCCCCEEEEcCC-chHHHHHHHHHHHhcCCe
Confidence 5678863 5788899999996 2 4999999999999999988 689999887643 2333 3334344556788
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCc
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
++..++. .+.+++++++.. +|++|.+...+|.||.++|++ +++.|+++|+.+++|.++..|....
T Consensus 119 ~v~~vd~------~d~e~l~~~i~~--------~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~ 184 (388)
T PRK08861 119 KVQFVDQ------SDAAALDAALAK--------KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQK 184 (388)
T ss_pred EEEEECC------CCHHHHHHhcCc--------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCC
Confidence 8887752 367778777642 589999999999999999998 4567899999999999988764223
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCc-eEE-EEEe
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTG-FGC-LLIK 379 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtG-vG~-LyVR 379 (872)
|++ +++|+++.|+|||+++ |.+ +|. ++.+
T Consensus 185 pl~---~GaDivv~S~tK~l~G-~~d~~gG~i~~~ 215 (388)
T PRK08861 185 PLE---LGADFVIHSTTKYING-HSDVIGGVLITK 215 (388)
T ss_pred Ccc---cCCCEEEeecceeccC-CCcceeEEEEec
Confidence 443 5899999999999998 655 344 4443
No 71
>PLN02271 serine hydroxymethyltransferase
Probab=99.50 E-value=5.1e-13 Score=154.68 Aligned_cols=216 Identities=11% Similarity=0.051 Sum_probs=145.7
Q ss_pred CCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcC-CCchHHHHHHHHHHHHHhcCCCCCCCc-EEEeCCHHHHHHHHH
Q 002866 156 CGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYG-GAEKGTVEHDIKTRIMDHLNIPENEYG-LVFTVSRGSAFKLLA 233 (872)
Q Consensus 156 AAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg-NpsS~~~ieeARerIA~lLgA~~dEY~-VVFTsnATeALnLVa 233 (872)
++-..+++.|++++- +.|.- .+.......-+|+ +....++..-+.+++.++||++..+|. =|=--+++.|+..|.
T Consensus 155 ASEN~~S~av~~alg--S~ltn-kYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~ 231 (586)
T PLN02271 155 ASENFVCRAVMEALG--SHLTN-KYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVY 231 (586)
T ss_pred cccccCCHHHHHHhc--Ccccc-cCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHH
Confidence 555678888888742 12210 0111000001222 222235666789999999999875441 122348889999999
Q ss_pred hhCCCCCCCeEEEec-ccC-chhHHHHH---HHHHHcCcEEEEEe--ccCCCCccCHHHHHHHHhhhhccCCCCCceEEE
Q 002866 234 ESYPFHTNKKLLTMF-DYE-SQSVNWMA---QSAKEKGAKVYSAW--FKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFV 306 (872)
Q Consensus 234 eslpf~~Gd~ILT~~-DhE-HnSVl~~~---~~AkrkGaeV~~Vp--vd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa 306 (872)
.++ +++||.|++.. +|- |-+..... ..+...|+.+..++ ++..++.||.++|++.+.. .+++||+
T Consensus 232 ~AL-l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~-------~rPKLII 303 (586)
T PLN02271 232 TGL-LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD-------FRPKILI 303 (586)
T ss_pred HHh-cCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh-------cCCeEEE
Confidence 898 89999998742 222 21111100 22344677777777 6656789999999986543 3689999
Q ss_pred EeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCccCCCC---CCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 307 FPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDSLGLS---LFRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 307 ~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mipLDLs---~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
+.+.++. ..+|++.+ ++|+++|+++++|+||.+|. +..++- ...+|++++++||||.+ |.| |+++++++.
T Consensus 304 ~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGL--Ia~g~~~sP~~~aDvvt~TTHKtLrG-PrG-G~I~~r~~~ 377 (586)
T PLN02271 304 CGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGL--VAAKECVNPFDYCDIVTSTTHKSLRG-PRG-GIIFYRKGP 377 (586)
T ss_pred ECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccc--cccCcCCCCCcCCcEEEeCCcccCCC-CCc-eEEEecccc
Confidence 9888887 77889855 56799999999999999996 655532 23699999999999988 999 888888887
Q ss_pred cccccC
Q 002866 383 MGSLQN 388 (872)
Q Consensus 383 i~~L~P 388 (872)
...+++
T Consensus 378 ~~~~~g 383 (586)
T PLN02271 378 KLRKQG 383 (586)
T ss_pred cccccC
Confidence 654543
No 72
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.50 E-value=4.7e-13 Score=143.71 Aligned_cols=170 Identities=14% Similarity=0.123 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
....+++|+.+++++|++ + ++++.++|+++..++..+ +++|++|++. +..|.++. ..++..|+++..++.
T Consensus 45 ~~~~~~l~~~la~~~~~~-~---~iv~~sg~~a~~~~~~~~-~~~gd~Vl~~-~~~~~~~~---~~~~~~g~~~~~~~~- 114 (349)
T cd06454 45 SDLHEELEEELAEFHGKE-A---ALVFSSGYAANDGVLSTL-AGKGDLIISD-SLNHASII---DGIRLSGAKKRIFKH- 114 (349)
T ss_pred chHHHHHHHHHHHHhCCC-C---EEEeccHHHHHHHHHHHh-cCCCCEEEEe-hhhhHHHH---HHHHHcCCceEEecC-
Confidence 356789999999999985 2 344555577777666555 4789998875 44566543 334567998887642
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCc-------c
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMD-------S 347 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mi-------p 347 (872)
++.++++++|.... ...++++|++++.+|.||++.|++ ++..|+++|+++++|+++..|.- . .
T Consensus 115 -----~~~~~le~~i~~~~---~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~-~~~~~~~~~ 185 (349)
T cd06454 115 -----NDMEDLEKLLREAR---RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVY-GPHGRGVEE 185 (349)
T ss_pred -----CCHHHHHHHHHHhh---ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEcccccccc-CCCCCChhh
Confidence 46788888886421 113578999999999999999997 56788999999999999876531 1 1
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++....++|+++.|+||+|| +.| |+++.+++.++.+.
T Consensus 186 ~~~~~~~~~i~~~s~sK~~~--~~g-G~i~~~~~~~~~~~ 222 (349)
T cd06454 186 FGGLTDDVDIIMGTLGKAFG--AVG-GYIAGSKELIDYLR 222 (349)
T ss_pred hccccccCcEEEeechhhhc--ccC-CEEECCHHHHHHHH
Confidence 33445688999999999999 456 77777777665554
No 73
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.50 E-value=3.2e-13 Score=151.79 Aligned_cols=152 Identities=13% Similarity=0.054 Sum_probs=117.2
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-HHHHHHHcCcE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-MAQSAKEKGAK 268 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~~~~AkrkGae 268 (872)
++||. ....|++||++.++. .+++|+|+++|+++++.++ +++||+||+... .+..... +...+++.|++
T Consensus 58 ~~npt----~~~Le~~iA~le~~~----~~~~~~sG~~Ai~~~l~al-l~~GD~Vvv~~~-~Y~~t~~l~~~~l~~~Gi~ 127 (394)
T PRK09028 58 RGTPT----HFAFQAAIVELEGGA----GTALYPSGAAAISNALLSF-LKAGDHLLMVDS-CYEPTRDLCDKILKGFGIE 127 (394)
T ss_pred CCCch----HHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEECC-CcHHHHHHHHHhhhhcceE
Confidence 45664 347889999998873 3899999999999999887 789999887632 2322322 22345668999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+..++.+ +.++++++|. ++|+||.+.+.+|.||.+.|++ +++.||++|+++++|.+++.|..
T Consensus 128 v~~v~~~------~~e~l~~~l~--------~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~--- 190 (394)
T PRK09028 128 TTYYDPM------IGEGIRELIR--------PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN--- 190 (394)
T ss_pred EEEECCC------CHHHHHHhcC--------cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc---
Confidence 8876532 3466776664 3699999999999999999998 56788999999999999988842
Q ss_pred CCCCCCCCcEEEEcccccCCC
Q 002866 348 LGLSLFRPDFIITSFYRVFGF 368 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~ 368 (872)
++.-++++|+++.|+|||+++
T Consensus 191 ~~Pl~~GaDivv~S~tK~l~G 211 (394)
T PRK09028 191 SRPFEMGVDISIQAATKYIVG 211 (394)
T ss_pred CCccccCceEEEEeCCeEecC
Confidence 333357999999999999987
No 74
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.49 E-value=5.2e-13 Score=144.45 Aligned_cols=207 Identities=14% Similarity=0.125 Sum_probs=143.6
Q ss_pred ceecccCCC-CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 150 KVCLDYCGF-GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAt-gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
.|.|-.+-. .+.|+.+++++.+ .... ...|+.+. ..+.|+.||+++|++++ +|+||+|+|++
T Consensus 21 ~i~l~~~~~~~~~~~~~~~a~~~--------~~~~---~~~y~~~~----~~~lr~~ia~~~~~~~~--~i~~~~G~~~~ 83 (346)
T TIGR01141 21 VIKLNSNENPFGPPPKAKEALRA--------EADK---LHRYPDPD----PAELKQALADYYGVDPE--QILLGNGSDEI 83 (346)
T ss_pred eEEccCCCCCCCCCHHHHHHHHH--------hHHH---hhcCCCCC----HHHHHHHHHHHhCcChH--HEEEcCCHHHH
Confidence 566654443 3356677777543 1111 12455544 26899999999999776 59999999999
Q ss_pred HHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEe
Q 002866 229 FKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFP 308 (872)
Q Consensus 229 LnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p 308 (872)
+.+++.++. ++|++|++.. ..+ ..+...++..|+++..++++. ++.++.+++++++. +++++|.++
T Consensus 84 l~~~~~~l~-~~gd~v~~~~-p~y---~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~~~--------~~~~~v~l~ 149 (346)
T TIGR01141 84 IELLIRAFL-EPGDAVLVPP-PTY---SMYEISAKIHGAEVVKVPLDE-DGQLDLEDILVAID--------DKPKLVFLC 149 (346)
T ss_pred HHHHHHHhc-CCCCEEEEcC-CCH---HHHHHHHHHcCCeEEEeccCC-CCCCCHHHHHHhcC--------CCCCEEEEe
Confidence 999988874 7889988763 222 233445677899999999875 46788999987653 258899999
Q ss_pred CccCcccchhcHHHH-HHHHHC--CcEEEeecccc--CCCCCccCCC-CCCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 309 VQSRVTGAKYSYQWM-ALAQQN--HWHVLLDAGSL--GPKDMDSLGL-SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 309 ~vSNvTG~i~PLe~I-~~Are~--G~~VLVDAAQ~--aG~~mipLDL-s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
+.+|.||..+|++.+ +.++.. ++++++|.++. .+.. ..++. ...+.++++.|++|+||.+..++|++++++++
T Consensus 150 ~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~ 228 (346)
T TIGR01141 150 SPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEP-STLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEI 228 (346)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCc-cHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHH
Confidence 999999999999754 455544 99999999965 2110 01111 12334577899999997411237999998887
Q ss_pred cccccC
Q 002866 383 MGSLQN 388 (872)
Q Consensus 383 i~~L~P 388 (872)
++.+++
T Consensus 229 ~~~~~~ 234 (346)
T TIGR01141 229 IDALNK 234 (346)
T ss_pred HHHHHh
Confidence 777764
No 75
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.48 E-value=5.7e-13 Score=147.08 Aligned_cols=171 Identities=16% Similarity=0.102 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p 277 (872)
...+.|+++++++|++ +.| ++.|+|+|+.+++.++.+++||+|++.. ..+.+. ...++..|++++.++++..
T Consensus 30 ~~~~le~~la~~~g~~---~~v-~~~sgt~al~~~l~al~~~~Gd~Viv~~-~~~~~~---~~~~~~~G~~~~~~~~~~~ 101 (380)
T TIGR03588 30 TVPAFEEALAEYVGAK---YAV-AFNSATSALHIACLALGVGPGDRVWTTP-ITFVAT---ANCALYCGAKVDFVDIDPD 101 (380)
T ss_pred hHHHHHHHHHHHHCCC---eEE-EEcCHHHHHHHHHHHcCCCCCCEEEeCC-cchHHH---HHHHHHcCCEEEEEecCCC
Confidence 3578999999999984 234 4558999999999998888999988763 333333 3445678999999999755
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCC-
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP- 355 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~- 355 (872)
++.++.+++++.|... ..++|++|.+++ .+|...|++ +++.|+++|+.+++|++|+.|. .++...++.
T Consensus 102 ~~~~d~~~l~~~i~~~----~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~---~~~~~~~g~~ 171 (380)
T TIGR03588 102 TGNIDEDALEKKLAAA----KGKLPKAIVPVD---FAGKSVDMQAIAALAKKHGLKIIEDASHALGA---EYGGKPVGNC 171 (380)
T ss_pred cCCcCHHHHHHHhhcc----cCCCceEEEEeC---CCCccCCHHHHHHHHHHcCCEEEEECCCcccC---ccCCEeCCCc
Confidence 6678999999988632 113578877654 589999997 5677899999999999999986 256666677
Q ss_pred ---cEEEEccc--ccCCCCCCceEEEEEeCCCccccc
Q 002866 356 ---DFIITSFY--RVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 356 ---DFlv~S~H--K~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
|+.++|+| |+++. |.|-.+++.+++..+.++
T Consensus 172 ~~~d~~~~S~~~~K~~~~-~~GG~v~~~~~~~~~~~~ 207 (380)
T TIGR03588 172 RYADATVFSFHPVKIITT-AEGGAVTTNDEELAERMR 207 (380)
T ss_pred cccceEEEecCCCCcccc-cCceEEEECCHHHHHHHH
Confidence 99999999 88875 433223332344445444
No 76
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.47 E-value=1.2e-12 Score=148.52 Aligned_cols=164 Identities=12% Similarity=0.074 Sum_probs=127.4
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCc-hhHHHHHHHHHHcCcE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYES-QSVNWMAQSAKEKGAK 268 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEH-nSVl~~~~~AkrkGae 268 (872)
++||. .....++||++.|+. ..++|+|++.|+..++.++ +++||+|++... .| .....+...+++.|++
T Consensus 61 ~~~p~----~~~Le~~lA~leg~~----~al~~~sG~~Ai~~al~~l-l~~GD~Vlv~~~-~y~~t~~~~~~~~~~~Gv~ 130 (431)
T PRK08248 61 IMNPT----TDVFEKRIAALEGGI----GALAVSSGQAAITYSILNI-ASAGDEIVSSSS-LYGGTYNLFAHTLPKLGIT 130 (431)
T ss_pred CCCch----HHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEccC-chhhHHHHHHHHHHhCCEE
Confidence 45664 356778899999963 2678999999999888777 688999887642 23 3344555667889999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
++.++.. +.++++++|.. +|++|.+.+.+|.||.++|++ +++.||++|+.+++|++++.|.. .
T Consensus 131 v~~vd~~------d~e~l~~ai~~--------~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~--~ 194 (431)
T PRK08248 131 VKFVDPS------DPENFEAAITD--------KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL--L 194 (431)
T ss_pred EEEECCC------CHHHHHHhcCC--------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc--C
Confidence 9988752 57888877742 589999999999999999997 45678999999999999887652 3
Q ss_pred CCCCCCCCcEEEEcccccCCCCCC-ceEEEEEeCC
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPT-GFGCLLIKKS 381 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~Pt-GvG~LyVRk~ 381 (872)
.++ ++++|+++.|+|||+|+ |. -+|.+++...
T Consensus 195 ~pl-~~gaDivv~S~tK~lgg-~g~~~Gg~v~~~~ 227 (431)
T PRK08248 195 RPI-EHGADIVVHSATKFIGG-HGTSIGGVIVDSG 227 (431)
T ss_pred Chh-HcCCCEEEEcCccccCC-CCCceEEEEEeCC
Confidence 334 57999999999999996 43 2888888654
No 77
>PRK09105 putative aminotransferase; Provisional
Probab=99.47 E-value=9.6e-13 Score=145.61 Aligned_cols=208 Identities=15% Similarity=0.122 Sum_probs=145.6
Q ss_pred cCCCCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeC
Q 002866 145 LHLSPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTV 223 (872)
Q Consensus 145 P~L~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTs 223 (872)
|.....+|||.+.... +|+.+++++.+ ... . ...|+.+. ..+.|+.|++++|++++ +|++|+
T Consensus 40 ~~~~~~i~l~~~~~~~~~~~~~~~a~~~-------~~~-~---~~~Y~~~~----~~~Lr~aia~~~~v~~e--~I~it~ 102 (370)
T PRK09105 40 PAAEGAVFLNANECPLGPSPAARDAAAR-------SAA-L---SGRYDLEL----EDDLRTLFAAQEGLPAD--HVMAYA 102 (370)
T ss_pred CCCCCcEEecCCCCCCCCCHHHHHHHHH-------HHH-H---hcCCCCch----HHHHHHHHHHHhCcChh--hEEEcC
Confidence 3345689999998764 56777776432 111 1 12354332 56899999999999887 499999
Q ss_pred CHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCce
Q 002866 224 SRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAG 303 (872)
Q Consensus 224 nATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~ 303 (872)
|+++++.+++..+ .++||+|++. +..+. .....++..|+++..+|.+. +..++.+++++.. ++++
T Consensus 103 Gs~~ai~~~~~~l-~~~gd~Vli~-~P~y~---~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~---------~~~~ 167 (370)
T PRK09105 103 GSSEPLNYAVLAF-TSPTAGLVTA-DPTYE---AGWRAADAQGAPVAKVPLRA-DGAHDVKAMLAAD---------PNAG 167 (370)
T ss_pred ChHHHHHHHHHHH-cCCCCEEEEe-CCChH---HHHHHHHHcCCeEEEecCCC-CCCCCHHHHHhcC---------CCCC
Confidence 9999999999988 4689998765 32223 33456777899999998864 4567777775431 2478
Q ss_pred EEEEeCccCcccchhcHHHHHHH---HHCCcEEEeeccc--cCCCCCccCCCCCCCCcEE-EEcccccCCCCCCc--eEE
Q 002866 304 LFVFPVQSRVTGAKYSYQWMALA---QQNHWHVLLDAGS--LGPKDMDSLGLSLFRPDFI-ITSFYRVFGFDPTG--FGC 375 (872)
Q Consensus 304 LVa~p~vSNvTG~i~PLe~I~~A---re~G~~VLVDAAQ--~aG~~mipLDLs~l~~DFl-v~S~HK~fG~~PtG--vG~ 375 (872)
++.++.-+|.||..+|.+.+..+ +++++++++|.+. +.+. ...+++.....+.+ +.|+-|.|| ..| +|+
T Consensus 168 ~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~-~s~~~~~~~~~~vi~~~SfSK~~g--~~GlRiG~ 244 (370)
T PRK09105 168 LIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDA-PSVVDLVAQRKDLIVLRTFSKLYG--MAGMRLGL 244 (370)
T ss_pred EEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccC-cchHHHHhhCCCEEEEecccHhhc--CCccceee
Confidence 99999999999999999855432 2458999999985 2221 01234433455644 458889999 457 999
Q ss_pred EEEeCCCccccc
Q 002866 376 LLIKKSVMGSLQ 387 (872)
Q Consensus 376 LyVRk~~i~~L~ 387 (872)
++..++.++.+.
T Consensus 245 ~v~~~~~i~~l~ 256 (370)
T PRK09105 245 AAARPDLLAKLA 256 (370)
T ss_pred eecCHHHHHHHH
Confidence 998877776664
No 78
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.47 E-value=7e-13 Score=148.97 Aligned_cols=169 Identities=12% Similarity=0.072 Sum_probs=126.4
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhH-HHHHHHHHHcCcE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAK 268 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGae 268 (872)
|+||. ++..++++|+++|++. .+.++|++.|+.++..++ +++||+||+... .+... ..+...++..|++
T Consensus 62 ~~~p~----~~~le~~lA~l~g~~~----~i~~~sG~~Al~~~l~~l-l~~Gd~Viv~~~-~y~~t~~~~~~~~~~~G~~ 131 (403)
T PRK07503 62 ISNPT----LALLEQRMASLEGGEA----AVALASGMGAITATLWTL-LRPGDEVIVDQT-LYGCTFAFLHHGLGEFGVT 131 (403)
T ss_pred CCCch----HHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHHHH-cCCCCEEEEccC-ccchHHHHHHHHHhhCCEE
Confidence 45554 5678899999999953 355667889999998877 689999887643 23323 3334556778999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+..++++ ++++++++|.. +|++|.+...+|.||.+.|++ +++.|+++|+.+++|.+++.+....+
T Consensus 132 v~~vd~~------d~~~l~~~i~~--------~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~ 197 (403)
T PRK07503 132 VRHVDLT------DPAALKAAISD--------KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRP 197 (403)
T ss_pred EEEeCCC------CHHHHHHhcCc--------cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 9988753 56778777742 589999999999999999997 55678999999999999876642123
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSL 386 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L 386 (872)
+ .+++|++++|++|++|+ |.+ .|+++.+++.++.+
T Consensus 198 l---~~g~Di~v~S~tK~l~g-~gd~~gG~v~~~~~l~~~l 234 (403)
T PRK07503 198 L---ELGADLVVHSATKYLGG-HGDITAGLVVGGKALADRI 234 (403)
T ss_pred h---hhCCCEEEccccccccC-CCceeEEEEEcCHHHHHHH
Confidence 3 36899999999999996 443 67777666555444
No 79
>PRK05939 hypothetical protein; Provisional
Probab=99.46 E-value=1.3e-12 Score=146.84 Aligned_cols=152 Identities=10% Similarity=0.037 Sum_probs=119.1
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKV 269 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV 269 (872)
+|||. .....++||++.|+.. .|+|++| +.|+..+..++ +++||+||+... .+.+...+...+++.|+++
T Consensus 44 ~g~p~----~~~lE~~la~leg~~~---~v~~ssG-~~Ai~~~l~al-l~~Gd~Vv~~~~-~y~~t~~~~~~l~~~G~~v 113 (397)
T PRK05939 44 QGTPT----TAALEAKITKMEGGVG---TVCFATG-MAAIAAVFLTL-LRAGDHLVSSQF-LFGNTNSLFGTLRGLGVEV 113 (397)
T ss_pred CCCHH----HHHHHHHHHHHhCCCe---EEEeCCH-HHHHHHHHHHH-cCCCCEEEECCC-ccccHHHHHHHHHhcCCEE
Confidence 46664 4578889999999853 4766665 89999988887 689999887643 2333333334467789999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccC
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSL 348 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipL 348 (872)
+++++. +.++++++|. ++|++|.+.+.+|.||.+.|++ +++.||++|+++++|++|+.|. .+
T Consensus 114 ~~v~~~------d~e~l~~~l~--------~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~---~~ 176 (397)
T PRK05939 114 TMVDAT------DVQNVAAAIR--------PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPW---LF 176 (397)
T ss_pred EEECCC------CHHHHHHhCC--------CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccc---cc
Confidence 988752 5678887774 3689999999999999999997 5677899999999999998875 46
Q ss_pred CCCCCCCcEEEEcccccCCC
Q 002866 349 GLSLFRPDFIITSFYRVFGF 368 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~ 368 (872)
+...+++|+++.|++|+|++
T Consensus 177 ~~~~~gaDivv~S~sK~~~g 196 (397)
T PRK05939 177 RPKDVGASLVINSLSKYIAG 196 (397)
T ss_pred CccccCCEEEEecCeecccC
Confidence 66677999999999999996
No 80
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.46 E-value=1.6e-12 Score=147.17 Aligned_cols=159 Identities=12% Similarity=0.116 Sum_probs=124.1
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT 278 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~ 278 (872)
.....++||++.|+.. .++++++++|+.+++.++ +++|++||+.....+.....+...+++.|+++++++..
T Consensus 65 ~~~le~~lA~l~g~~~----al~~~SG~~Ai~~al~al-l~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~--- 136 (427)
T PRK05994 65 NAVLEERVAALEGGTA----ALAVASGHAAQFLVFHTL-LQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD--- 136 (427)
T ss_pred HHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHHHH-hCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC---
Confidence 3567889999999852 678899999999998887 68999988764322233344555567789999988643
Q ss_pred CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcE
Q 002866 279 LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDF 357 (872)
Q Consensus 279 g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DF 357 (872)
+.++++++|. ++|++|.+.+.+|.+|.+.|++ +++.|+++|+.+++|.+++.|.. .+.-++++|+
T Consensus 137 ---d~~~l~~ai~--------~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~---~~pl~~gaDi 202 (427)
T PRK05994 137 ---DPASFERAIT--------PRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL---IRPIEHGADI 202 (427)
T ss_pred ---CHHHHHHhcC--------cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc---CCccccCCcE
Confidence 5677877774 2589999999999999999997 55678999999999999988863 2223579999
Q ss_pred EEEcccccCCCCCCc-eEEEEEeC
Q 002866 358 IITSFYRVFGFDPTG-FGCLLIKK 380 (872)
Q Consensus 358 lv~S~HK~fG~~PtG-vG~LyVRk 380 (872)
++.|+||++|+ |.| +|++++..
T Consensus 203 vv~S~tK~lgg-~~~~~gG~v~~~ 225 (427)
T PRK05994 203 VVHSLTKFLGG-HGNSMGGIIVDG 225 (427)
T ss_pred EEEcCccccCC-CCCcEEEEEEeC
Confidence 99999999996 554 78888754
No 81
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.46 E-value=1.4e-12 Score=148.46 Aligned_cols=166 Identities=10% Similarity=-0.016 Sum_probs=124.7
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAK 268 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGae 268 (872)
++||. .+...++||++.|+.. .+++++++.|+.+++.++ .++|++||+.. ..|..+. .+...+++.|++
T Consensus 66 ~~~p~----~~~Le~~lA~l~g~~~----av~~sSG~aAi~~al~al-l~~Gd~Vv~~~-~~y~~t~~~~~~~l~~~Gi~ 135 (436)
T PRK07812 66 IMNPT----QDVVEQRIAALEGGVA----ALLLASGQAAETFAILNL-AGAGDHIVSSP-RLYGGTYNLFHYTLPKLGIE 135 (436)
T ss_pred CCCch----HHHHHHHHHHHhCCCe----EEEEccHHHHHHHHHHHH-hCCCCEEEEeC-CcchHHHHHHHHHhhcCeEE
Confidence 34665 3477889999999852 577778899999888777 57899988663 3444443 333445668999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+..++ +. .+.++++++|. ++|++|.+.+.+|++|.+.|++ +.+.||++|+.++||++|+.|. ..
T Consensus 136 v~~vd-d~----~d~e~l~~ai~--------~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~--~~ 200 (436)
T PRK07812 136 VSFVE-DP----DDLDAWRAAVR--------PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPY--LI 200 (436)
T ss_pred EEEEC-CC----CCHHHHHHhCC--------CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccc--cC
Confidence 88875 21 26777777664 3689999999999999999998 5567899999999999998875 22
Q ss_pred CCCCCCCCcEEEEcccccCCCCC-CceEEEEEeCCC
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDP-TGFGCLLIKKSV 382 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~ 382 (872)
+.-++++|+++.|+||++|+ + ..+|.+++....
T Consensus 201 -~pl~~GaDivv~S~tK~lgg-~G~~i~G~vv~~~~ 234 (436)
T PRK07812 201 -RPLEHGADIVVHSATKYLGG-HGTAIAGVIVDGGT 234 (436)
T ss_pred -CchhcCCCEEEEecccccCC-CCCeEEEEEEcCCc
Confidence 22357999999999999995 3 228888875543
No 82
>PRK08960 hypothetical protein; Provisional
Probab=99.46 E-value=1.8e-12 Score=143.40 Aligned_cols=215 Identities=13% Similarity=0.073 Sum_probs=146.7
Q ss_pred cccCCCCceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC------CCCC
Q 002866 143 EYLHLSPKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN------IPEN 215 (872)
Q Consensus 143 EFP~L~~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg------A~~d 215 (872)
.++.-.+.++||.+..+ ++|+.+++++.+ .+... ...|+.+ .-..+.|+.||++++ ++++
T Consensus 27 ~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~-------~~~~~---~~~Y~~~---~g~~~lr~~ia~~~~~~~g~~~~~~ 93 (387)
T PRK08960 27 LEAAGHDVIHLEIGEPDFTTAEPIVAAGQA-------ALAAG---HTRYTAA---RGLPALREAIAGFYAQRYGVDVDPE 93 (387)
T ss_pred HHhcCCCeEEeCCCCCCCCCCHHHHHHHHH-------HHhcC---CCccCCC---CCCHHHHHHHHHHHHHHhCCCCChh
Confidence 35555568999999998 467778776432 12211 1124322 124578999999874 6665
Q ss_pred CCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHHHhhhh
Q 002866 216 EYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQISSKK 294 (872)
Q Consensus 216 EY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~I~~~~ 294 (872)
+|++|+|+++|+++++..+ +.+||+|++. +..+..... .++..|+++..+|++.. +..++.+++++++..
T Consensus 94 --~i~it~G~~~al~~~~~~~-~~~gd~vlv~-~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-- 164 (387)
T PRK08960 94 --RILVTPGGSGALLLASSLL-VDPGKHWLLA-DPGYPCNRH---FLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA-- 164 (387)
T ss_pred --hEEEccCcHHHHHHHHHHh-cCCCCEEEEc-CCCCcchHH---HHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc--
Confidence 5999999999999999888 6889998865 323343333 33456899999998753 235788888887753
Q ss_pred ccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecccc-CCCCCccCCCCCCCC-cEEEEcccccCCC
Q 002866 295 RRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSL-GPKDMDSLGLSLFRP-DFIITSFYRVFGF 368 (872)
Q Consensus 295 rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~-aG~~mipLDLs~l~~-DFlv~S~HK~fG~ 368 (872)
+++++.++..+|.||..+|.+. ++.|+++|+++++|.+-. .-.+.....+-.... -+++.|+.|.||.
T Consensus 165 ------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 238 (387)
T PRK08960 165 ------DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGM 238 (387)
T ss_pred ------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCC
Confidence 4788899999999999999863 345789999999999721 110000111112222 3788999999984
Q ss_pred CCCc--eEEEEEeCCCccccc
Q 002866 369 DPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 369 ~PtG--vG~LyVRk~~i~~L~ 387 (872)
.| +|.++..++.++.+.
T Consensus 239 --~GlRiG~~~~~~~~~~~~~ 257 (387)
T PRK08960 239 --TGWRLGWLVAPPAAVPELE 257 (387)
T ss_pred --cccEEEEEEcCHHHHHHHH
Confidence 47 999998877665543
No 83
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.46 E-value=2.9e-12 Score=143.75 Aligned_cols=199 Identities=10% Similarity=-0.014 Sum_probs=138.3
Q ss_pred cccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 143 EYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 143 EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
.|+.....||++++...+.+..+.+.... ...... ...|+||. ..+.++++|+++|+++. ++ +
T Consensus 24 ~~~~~~~pi~~~~~~~~~~~~~~~~~~~~-------~~~~~~--y~r~~~p~----~~~Le~~lA~l~G~~~~---~~-~ 86 (398)
T PRK07504 24 QFGETSEALFLTQGFVYDTAEAAEARFKG-------EDPGFI--YSRYSNPT----VDMFEKRMCALEGAEDA---RA-T 86 (398)
T ss_pred CCCCCcCCeECCCCccCCCHHHHHHHhcc-------CcCCce--eecCCCch----HHHHHHHHHHHhCCCee---eE-e
Confidence 46666668999999888776554432110 000000 12356665 46788999999999643 54 6
Q ss_pred CCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCC
Q 002866 223 VSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSA 301 (872)
Q Consensus 223 snATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~ 301 (872)
++++.|+..+...+ +++||+|++... .+.+.. .+...+++.|++++.++ .++.++++++|. ++
T Consensus 87 ~sG~~Ai~~~l~~~-l~~Gd~Vl~~~~-~y~~~~~~~~~~~~~~G~~v~~vd------~~d~e~l~~ai~--------~~ 150 (398)
T PRK07504 87 ASGMAAVTAAILCQ-VKAGDHVVAARA-LFGSCRYVVETLLPRYGIESTLVD------GLDLDNWEKAVR--------PN 150 (398)
T ss_pred cCHHHHHHHHHHHH-hCCCCEEEEcCC-chhHHHHHHHHHHhhcCeEEEEEC------CCCHHHHHHhcC--------cC
Confidence 78888887666543 578999887632 233333 33445667899998874 257788887774 35
Q ss_pred ceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCC-ceEEEEE
Q 002866 302 AGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPT-GFGCLLI 378 (872)
Q Consensus 302 T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~Pt-GvG~LyV 378 (872)
|++|.+.+.+|.||.++|++. .+.|+++|+.+++|++++.+.. . ..-.+++|+++.|+||+||+ |. .+|..++
T Consensus 151 tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~--~-~~~~~gaDivv~S~sK~l~g-~g~~~GG~vv 225 (398)
T PRK07504 151 TKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLF--Q-KPLELGAHIVVYSATKHIDG-QGRCLGGVVL 225 (398)
T ss_pred ceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCcccccc--C-CchhhCCCEEEeeccccccC-CccceEEEEE
Confidence 899999999999999999984 5678999999999999876642 1 22245899999999999986 32 3654444
No 84
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.46 E-value=1.4e-12 Score=145.79 Aligned_cols=159 Identities=13% Similarity=0.068 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-HHHHHHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-MAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~~~~AkrkGaeV~~Vpvd~ 276 (872)
.+++.++++|+++|++ .+++|+|+++|+.+++.++ +++||+||+... .|.+... +...++..|++++.++++
T Consensus 62 ~~~~le~~la~l~g~~----~~v~~ssG~~Ai~~al~al-~~~Gd~Vi~~~~-~y~~t~~~~~~~~~~~G~~v~~vd~~- 134 (390)
T PRK08133 62 TVTMFQERLAALEGAE----ACVATASGMAAILAVVMAL-LQAGDHVVSSRS-LFGSTVSLFEKIFARFGIETTFVDLT- 134 (390)
T ss_pred HHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEccC-cchhHHHHHHHHHHHcCcEEEEECCC-
Confidence 4678999999999984 2788999999999988877 678999887633 3444433 445667789999988753
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
+.++++++|. ++|++|.+...+|.+|.+.|++ +++.||++|+++++|.++..+....++ ..++
T Consensus 135 -----d~~~l~~~i~--------~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl---~~g~ 198 (390)
T PRK08133 135 -----DLDAWRAAVR--------PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPL---KLGA 198 (390)
T ss_pred -----CHHHHHHhcC--------cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCch---hhCC
Confidence 5677877774 3589999999999999999997 557889999999999997666411232 4578
Q ss_pred cEEEEcccccCCCCCCc--e-EEEEEeCC
Q 002866 356 DFIITSFYRVFGFDPTG--F-GCLLIKKS 381 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtG--v-G~LyVRk~ 381 (872)
|+++.|++|++|+ .| + |+++.+++
T Consensus 199 Divv~S~sK~~~g--~g~~~GG~vv~~~~ 225 (390)
T PRK08133 199 DVVIHSATKYLDG--QGRVLGGAVVGSKE 225 (390)
T ss_pred cEEEeecceeecC--CcceEeEEEEcCHH
Confidence 9999999999984 34 5 44444433
No 85
>PRK07179 hypothetical protein; Provisional
Probab=99.46 E-value=2.2e-12 Score=143.80 Aligned_cols=163 Identities=17% Similarity=0.185 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p 277 (872)
...+..++||+++|++ .++||+++++|+.+++.++. .+|+.+++. ..+|.++.. .++..|+++.. ++.
T Consensus 100 ~~~~le~~la~~~g~~----~~~~~~sG~~An~~~l~~l~-~~g~~v~~~-~~~h~s~~~---~~~~~g~~~~~--~~~- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTGFE----SCLLCQSGWAANVGLLQTIA-DPNTPVYID-FFAHMSLWE---GVRAAGAQAHP--FRH- 167 (407)
T ss_pred HHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHhC-CCCCEEEEE-CCcCHHHHH---HHHHCCCeEEE--ecC-
Confidence 4566778999999984 27889999999999998874 578887765 456777743 23446777653 322
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCC-------CccCC
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKD-------MDSLG 349 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~-------mipLD 349 (872)
.+.++|+++|... .+++|++.+++|+||.++|++. .+.|+++|+++++|.+|..|.. ...++
T Consensus 168 ---~d~~~l~~~l~~~-------~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~ 237 (407)
T PRK07179 168 ---NDVDHLRRQIERH-------GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELG 237 (407)
T ss_pred ---CCHHHHHHHHHhc-------CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcC
Confidence 4789999888531 3689999999999999999974 5678999999999999986531 00233
Q ss_pred CCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 350 LSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 350 Ls~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
+. .++|++++|+||+||+ ++|+++++++.++.+
T Consensus 238 ~~-~~vdi~~~S~sK~~g~---~~G~l~~~~~~~~~~ 270 (407)
T PRK07179 238 LT-SRVHFITASLAKAFAG---RAGIITCPRELAEYV 270 (407)
T ss_pred CC-CCCCEEEeechHhhhc---cCeEEEeCHHHHHHH
Confidence 32 2579999999999985 489999887765544
No 86
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.44 E-value=1.8e-12 Score=142.76 Aligned_cols=210 Identities=13% Similarity=0.138 Sum_probs=142.7
Q ss_pred CCceecccCCCCCC-cHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHH
Q 002866 148 SPKVCLDYCGFGLF-SYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRG 226 (872)
Q Consensus 148 ~~~IYLDyAAtgp~-p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnAT 226 (872)
...|.|+.+-..+. ++.+++++.+ .+... ....|+.+. -..+.|+.||+++|++++ +|++|+|+|
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~-------~~~~~--~~~~y~~~~---g~~~lr~~ia~~l~~~~~--~v~~~~g~t 93 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIR-------CIEEG--EYCKYPPPE---GFPELRELILKDLGLDDD--EALITAGAT 93 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHH-------HHhcC--CCCCCCCCc---chHHHHHHHHHhcCCCCC--cEEEeCCHH
Confidence 35789997766554 4555554322 11110 011243332 356899999999999876 599999999
Q ss_pred HHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC--CCccCHHHHHHHHhhhhccCCCCCceE
Q 002866 227 SAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP--TLKLCSTDLRKQISSKKRRKKDSAAGL 304 (872)
Q Consensus 227 eALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p--~g~Id~edLe~~I~~~~rr~~~~~T~L 304 (872)
+|+.+++.++ ..+|+.|++.. ..+ ......++..|++++.++++.. +..++.+++++.+.. ++++
T Consensus 94 ~al~~~~~~~-~~~gd~vl~~~-p~y---~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~--------~~~~ 160 (380)
T PRK06225 94 ESLYLVMRAF-LSPGDNAVTPD-PGY---LIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE--------NTRL 160 (380)
T ss_pred HHHHHHHHHh-cCCCCEEEEcC-CCC---cchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC--------CceE
Confidence 9999999887 46788877652 122 2233456778999999987421 346888988887742 4789
Q ss_pred EEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc---CCCCCccCCCCCCCCcEEEEcccccCCCCCCc--eEE
Q 002866 305 FVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL---GPKDMDSLGLSLFRPDFIITSFYRVFGFDPTG--FGC 375 (872)
Q Consensus 305 Va~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~---aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~ 375 (872)
+.+.+.+|.||..+|.+ +++.|+++|+++++|.++. .+.. ....+. ....+++.|+.|+|| +.| +|+
T Consensus 161 v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~-~~~~i~~~s~SK~~g--~~G~RiG~ 236 (380)
T PRK06225 161 IYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHT-LAAEYA-PEHTVTSYSFSKIFG--MAGLRIGA 236 (380)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCC-chhhcC-CCCEEEEeechhhcC--CccceeEE
Confidence 88888999999999853 3466799999999999852 2220 111111 133567779999998 447 699
Q ss_pred EEEeCCCcccccC
Q 002866 376 LLIKKSVMGSLQN 388 (872)
Q Consensus 376 LyVRk~~i~~L~P 388 (872)
+++++..++.+.+
T Consensus 237 i~~~~~l~~~~~~ 249 (380)
T PRK06225 237 VVATPDLIEVVKS 249 (380)
T ss_pred EecCHHHHHHHHH
Confidence 9998877766543
No 87
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.42 E-value=3.8e-12 Score=142.41 Aligned_cols=163 Identities=13% Similarity=0.066 Sum_probs=121.0
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.++||. +.+.+++||+++|++ .++.|+++++|+.+++.++ +++||+|++... .|.+...+.+.++..|++
T Consensus 49 r~~np~----~~~lE~~lA~l~g~~----~~l~~~sG~~Ai~~~l~~l-l~~GD~Vlv~~~-~y~~~~~~~~~~~~~g~~ 118 (385)
T PRK08574 49 REENPT----LRPLEEALAKLEGGV----DALAFNSGMAAISTLFFSL-LKAGDRVVLPME-AYGTTLRLLKSLEKFGVK 118 (385)
T ss_pred CCCCcc----HHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHH-hCCCCEEEEcCC-CchhHHHHHHHhhccCcE
Confidence 356665 457899999999974 2566788899999988877 688999887643 344554444444667988
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+..+. .+.++++++|.. .+|++|.+...+|.||.++|++ +++.||++|+++++|.+++.|....+
T Consensus 119 v~~~~-------~d~~~l~~~i~~-------~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~ 184 (385)
T PRK08574 119 VVLAY-------PSTEDIIEAIKE-------GRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRP 184 (385)
T ss_pred EEEEC-------CCHHHHHHhcCc-------cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCh
Confidence 87653 246778777742 1589999999999999999998 55788999999999999987742112
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc-e-EEEEEe
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG-F-GCLLIK 379 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG-v-G~LyVR 379 (872)
+ ..++|++++|++|++++ |.+ + |+++.+
T Consensus 185 l---~~GaDivv~S~sK~l~g-~~d~~gG~vi~~ 214 (385)
T PRK08574 185 L---RHGADFVVHSLTKYIAG-HNDVVGGVAVAW 214 (385)
T ss_pred h---hhCCcEEEeeCceeecC-CCCceeEEEEEC
Confidence 2 46899999999999987 654 3 435543
No 88
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.41 E-value=5.9e-12 Score=140.75 Aligned_cols=163 Identities=17% Similarity=0.127 Sum_probs=122.5
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchh-HHHHHHHHHHcCc
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQS-VNWMAQSAKEKGA 267 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnS-Vl~~~~~AkrkGa 267 (872)
.|+||.. +..++++|++.|+ + .+++|+|+++|+.+++.++ +++||+|++... .+.+ ...+...+...|+
T Consensus 47 R~~~p~~----~~le~~lA~l~g~--~--~v~~~~gg~~Ai~~~l~al-l~~GD~Vl~~~p-~y~~~~~~~~~~~~~~~~ 116 (382)
T TIGR02080 47 RSGNPTR----DLLQQALAELEGG--A--GAVVTNTGMSAIHLVTTAL-LGPDDLLVAPHD-CYGGTYRLLNALAKKGCF 116 (382)
T ss_pred CCCCchH----HHHHHHHHHHhCC--C--cEEEEcCHHHHHHHHHHHH-cCCCCEEEEcCC-CcHHHHHHHHHHHhhcCe
Confidence 5678763 5788899999995 2 3899999999999999988 689999886643 2333 3333444566678
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCc
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
++..++. .+.++++++|.. +|++|.+...+|.||.++|++ +++.||++|+++++|.+++.+....
T Consensus 117 ~v~~~d~------~d~~~l~~ai~~--------~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~ 182 (382)
T TIGR02080 117 RVLFVDQ------GDEQALRAALAQ--------KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQN 182 (382)
T ss_pred EEEEECC------CCHHHHHHhcCc--------CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 8877642 256778777742 589999999999999999998 4567899999999999987764212
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEe
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIK 379 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVR 379 (872)
++ .+++|+++.|++|++++ +.| .|++.++
T Consensus 183 pl---~~gaDivv~S~sK~l~G-~~~~~~G~i~~~ 213 (382)
T TIGR02080 183 PL---ALGADLVLHSCTKYLNG-HSDVIAGAVIAK 213 (382)
T ss_pred ch---hhCCCEEEeecceeccC-CCCceeEEEEeC
Confidence 33 35789999999999987 556 5555544
No 89
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.41 E-value=5.9e-12 Score=140.98 Aligned_cols=162 Identities=15% Similarity=0.126 Sum_probs=122.0
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchh-HHHHHHHHHHcCc
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQS-VNWMAQSAKEKGA 267 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnS-Vl~~~~~AkrkGa 267 (872)
.|+||. .+..+++||++.|.. .+++|+|+++|+.+++.++ +++||+|++... .+.. ...+...+...|+
T Consensus 48 R~~~pt----~~~L~~~lA~l~g~~----~~i~~~sg~~Ai~~~l~~l-~~~GD~Vl~~~~-~y~~~~~~~~~~~~~~gi 117 (386)
T PRK08045 48 RRGNPT----RDVVQRALAELEGGA----GAVLTNTGMSAIHLVTTVF-LKPGDLLVAPHD-CYGGSYRLFDSLAKRGCY 117 (386)
T ss_pred CCCCcc----HHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHH-cCCCCEEEEcCC-CcHHHHHHHHHHHhhCCe
Confidence 467775 357899999999962 3999999999999999876 578999887643 3343 3334445555666
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCc
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
++..++ ..+.+++++++.. +|++|.++..+|.||.++|++. .+.|+++|+++++|.++..|....
T Consensus 118 ~v~~vd------~~d~e~l~~~l~~--------~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~ 183 (386)
T PRK08045 118 RVLFVD------QGDEQALRAALAE--------KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQN 183 (386)
T ss_pred EEEEeC------CCCHHHHHHhccc--------CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 777653 1467788777642 5899999999999999999984 567899999999999988775212
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCc--eEEEEE
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLI 378 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyV 378 (872)
++ .+++|+++.|+|||+++ |.+ .|++++
T Consensus 184 pl---~~gaDivv~S~tK~l~G-~~d~~~G~vi~ 213 (386)
T PRK08045 184 PL---ALGADLVLHSCTKYLNG-HSDVVAGVVIA 213 (386)
T ss_pred ch---hhCCCEEEeecceeccC-CCCceeEEEEe
Confidence 33 45899999999999987 665 455544
No 90
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.41 E-value=6e-12 Score=139.89 Aligned_cols=168 Identities=10% Similarity=0.020 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p 277 (872)
.+.+.++++|+++|++ .+++|+|+|+|+.+++.++.+++||+||+.. ..|.+... .+...|++++.++++..
T Consensus 34 ~~~~le~~la~~~g~~----~~v~~~sgt~al~lal~al~~~~Gd~Viv~~-~~~~~~~~---~~~~~G~~~v~vd~~~~ 105 (379)
T PRK11658 34 KNQALEQAFCQLTGNQ----HAIAVSSATAGMHITLMALGIGPGDEVITPS-LTWVSTLN---MIVLLGATPVMVDVDRD 105 (379)
T ss_pred hHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHcCCCCCCEEEECC-CcHHHHHH---HHHHcCCEEEEEecCCC
Confidence 4678999999999984 2788999999999999998778999988763 34444432 34557999999999865
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCc
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPD 356 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~D 356 (872)
+..++.++++++|.. +|++|... |.+|...|++ +++.|+++|+.+++|+||+.|......++..+++|
T Consensus 106 ~~~~d~~~l~~~i~~--------~tkav~~~---~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~ 174 (379)
T PRK11658 106 TLMVTPEAIEAAITP--------RTKAIIPV---HYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTA 174 (379)
T ss_pred cCCcCHHHHHHhccc--------CCeEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCE
Confidence 667899999988853 47777644 4599999997 55778999999999999998752111236667888
Q ss_pred EEEEcccccCCCCCCceEEEEEeC--CCccccc
Q 002866 357 FIITSFYRVFGFDPTGFGCLLIKK--SVMGSLQ 387 (872)
Q Consensus 357 Flv~S~HK~fG~~PtGvG~LyVRk--~~i~~L~ 387 (872)
+++++.+|.+.. |-|.+++.+ +..+.++
T Consensus 175 ~~Sf~~~K~l~~---g~GG~v~~~~~~~~~~~~ 204 (379)
T PRK11658 175 IFSFHAIKNITC---AEGGLVVTDDDELADRLR 204 (379)
T ss_pred EEeCCCCCcCcc---cCceEEEECCHHHHHHHH
Confidence 888888897654 555555543 4444444
No 91
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.41 E-value=1.3e-11 Score=151.83 Aligned_cols=170 Identities=14% Similarity=0.131 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH-----HHHHHHhhCCCCCCC----eEEEecccCchhHHHHHHHHHHcC
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS-----AFKLLAESYPFHTNK----KLLTMFDYESQSVNWMAQSAKEKG 266 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATe-----ALnLVaeslpf~~Gd----~ILT~~DhEHnSVl~~~~~AkrkG 266 (872)
.+.+.+..+-+++++|.+ .+.|++|+|. ++ +++..|.+++|+ .++++ +..|.++.. .+...|
T Consensus 541 l~~i~e~q~~l~eltG~d----~~sl~~~~ga~ge~agL-~a~r~~~~~~G~~~r~~vlis-~~aH~snp~---sa~~~G 611 (954)
T PRK05367 541 RELIDQLEAWLAEITGYD----AVSLQPNAGAQGEYAGL-LAIRAYHESRGEGHRDVCLIP-SSAHGTNPA---SAVMAG 611 (954)
T ss_pred HHHHHHHHHHHHHHHCCC----CEEECccHHHHHHHHHH-HHHHHHhhccCCCCCCEEEEE-chhhhhhHH---HHHHCC
Confidence 368888999999999986 3888898883 44 577778777776 25554 445666643 245679
Q ss_pred cEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCC
Q 002866 267 AKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDM 345 (872)
Q Consensus 267 aeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~m 345 (872)
++|++++++. ++.++.++|+++|... ..++..|++++-++..+...|++ ++..+|++|++|+||+||..+.
T Consensus 612 ~~vv~v~~d~-~G~iD~~~L~~~i~~~-----~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al-- 683 (954)
T PRK05367 612 MKVVVVACDE-NGNIDLDDLRAKAEEH-----ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQ-- 683 (954)
T ss_pred CEEEEECCCC-CCCcCHHHHHHHHhcc-----CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhc--
Confidence 9999999985 5899999999988642 12455666666555533458997 5567899999999999998654
Q ss_pred ccCC-CCCCCCcEEEEcccccCCCCCC-----ceEEEEEeCCCc
Q 002866 346 DSLG-LSLFRPDFIITSFYRVFGFDPT-----GFGCLLIKKSVM 383 (872)
Q Consensus 346 ipLD-Ls~l~~DFlv~S~HK~fG~~Pt-----GvG~LyVRk~~i 383 (872)
+.+. ..++++|++++|+|||||. |. |+|+|+||+...
T Consensus 684 ~~l~~pg~~GADi~~~s~HK~f~~-P~G~GGPg~G~l~vr~~l~ 726 (954)
T PRK05367 684 VGLARPGDIGADVSHLNLHKTFCI-PHGGGGPGVGPIGVKAHLA 726 (954)
T ss_pred cCCCChhhcCCCEEEecCcccCCC-CcCCCCCceEEEeeccccc
Confidence 2333 2368999999999999865 44 477999986543
No 92
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.40 E-value=4.1e-11 Score=133.71 Aligned_cols=171 Identities=15% Similarity=0.217 Sum_probs=121.5
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCCcEEEeCC-HHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEE
Q 002866 193 AEKGTVEHDIKTRIMDHLNIPENEYGLVFTVS-RGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYS 271 (872)
Q Consensus 193 psS~~~ieeARerIA~lLgA~~dEY~VVFTsn-ATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~ 271 (872)
+...+++.++++.+.++|+++ ++|.|+|.+| +|.++..+..++- .+|++++.....-+=+ ..|.+.|++.| +|..
T Consensus 45 ~~F~~i~~~~~~~Lr~Ll~~P-~~y~Vlfl~GggT~~~ea~~~Nll-~~g~~~~~~~~tG~fg-~r~~~ea~~~g-~v~~ 120 (364)
T PRK12462 45 SWFSSLLAQAEADLRDLLGIP-DEYGVVFLQGGSSLQFSMIPMNFS-RPGAAAPEYVTTGYWS-RKAIGEASRVA-AMRV 120 (364)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CCCeEEEEeccHHHHHHHHHHHcC-CCCCcEEEEEeCCHHH-HHHHHHHHhcC-CceE
Confidence 334578999999999999995 4588888765 9999999888873 5677543111111111 24567788877 5665
Q ss_pred EeccCC---CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCCccC
Q 002866 272 AWFKWP---TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSL 348 (872)
Q Consensus 272 Vpvd~p---~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~mipL 348 (872)
+...+. ...++.+++ . ..++...|.++|..-.||+.+| ...+.+++.+++|+++.++. .|+
T Consensus 121 ~~~~~~~~~~~~p~~~~~----~------~~~d~~~v~~t~NETstGv~~~----~~~~~~~~llvvD~sS~~~s--~pi 184 (364)
T PRK12462 121 VWDGAASGYRTLPSLAEL----D------WDARAPFRHYVSNETVEGLQFP----DAAGLPDSPLIADMSSDFMS--RPF 184 (364)
T ss_pred ecCcCCCCCCcCCCHHHh----c------cCCCCcEEEEccCCCCceEecC----cccccCCCeEEEEcCchhhC--CCC
Confidence 543221 112233332 1 1234678999999999999997 22233689999999988876 599
Q ss_pred CCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 349 GLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
|++++ |.+.++.+|-+| |.|+++++|+++.++..+
T Consensus 185 d~~~~--dvi~agsQKnlg--P~Gltvvivs~~al~~~~ 219 (364)
T PRK12462 185 DVEAY--GMVYAHAQKNLG--PAGVTVAIIRRALLERVP 219 (364)
T ss_pred ChHHc--cEEEeeccccCC--CCceEEEEECHHHHhhcc
Confidence 99987 999999999999 679999999999876543
No 93
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.40 E-value=4.1e-12 Score=142.28 Aligned_cols=171 Identities=13% Similarity=0.078 Sum_probs=127.5
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchh-HHHHHHHHHHcCc
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQS-VNWMAQSAKEKGA 267 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnS-Vl~~~~~AkrkGa 267 (872)
.|+||. .++.+++||+++|+.. .++|+|+++|+.+++.++ +++|++|++... .|.. ...+...+...|+
T Consensus 55 r~~~p~----~~~le~~lA~l~g~~~----av~~~sG~~Ai~~~l~al-~~~Gd~Vi~~~~-~y~~t~~~~~~~~~~~G~ 124 (391)
T TIGR01328 55 RLGNPT----VSNLEGRIAFLEGTEA----AVATSSGMGAIAATLLTI-LKAGDHLISDEC-LYGCTFALLEHALTKFGI 124 (391)
T ss_pred CCCCch----HHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHH-hCCCCEEEEecC-cchHHHHHHHHHHhcCCe
Confidence 456765 4578889999999853 567888889999888777 678999887643 2332 3334455677899
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCc
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
++.+++++ +.++++++|. ++|++|.+...+|.+|.+.|++ +++.|+++|+.+++|.+++.+. .
T Consensus 125 ~~~~vd~~------d~e~l~~~i~--------~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~--~ 188 (391)
T TIGR01328 125 QVDFINMA------IPEEVKAHIK--------DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPM--L 188 (391)
T ss_pred EEEEECCC------CHHHHHHhhc--------cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhc--c
Confidence 99988753 5677877774 2589999999999999999997 5567899999999999987664 1
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
.-.+ ..++|++++|++|+||+ |.+ .|+++.+++.++.++
T Consensus 189 ~~~~-~~g~Divv~S~sK~lgg-~g~~~gG~v~~~~~li~~l~ 229 (391)
T TIGR01328 189 TNPV-ALGVDVVVHSATKYIGG-HGDVVAGLICGKAELLQQIR 229 (391)
T ss_pred CCch-hcCCCEEEccccccccC-CCCceEEEEEcCHHHHHHHH
Confidence 2222 35899999999999996 543 466766666554443
No 94
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.40 E-value=3.2e-12 Score=142.40 Aligned_cols=172 Identities=13% Similarity=0.067 Sum_probs=127.0
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.|+||. ..+.+++||+++|++ .+++++++++|+.+++.++ +++||+||+...........+...+++.|++
T Consensus 50 r~~~p~----~~~le~~la~l~g~~----~~~~~~sG~~Ai~~al~al-~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~ 120 (380)
T TIGR01325 50 RYANPT----VAAFEERIAALEGAE----RAVATATGMSAIQAALMTL-LQAGDHVVASRSLFGSTVGFISEILPRFGIE 120 (380)
T ss_pred cCCCch----HHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEecCCcchHHHHHHHHHHHhCCE
Confidence 355654 467889999999983 2778999999999988777 5789998875432112333445567778999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+..++.+ +.+++++++. +++++|.+...+|.+|.+.|++. .+.|+++|+++++|.++..+....+
T Consensus 121 v~~v~~~------d~~~l~~~i~--------~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~p 186 (380)
T TIGR01325 121 VSFVDPT------DLNAWEAAVK--------PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQP 186 (380)
T ss_pred EEEECCC------CHHHHHHhcC--------CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 9888653 4677776664 25899999999999999999985 5678999999999999865431123
Q ss_pred CCCCCCCCcEEEEcccccCCCCCC-ce-EEEEEeCCCccccc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPT-GF-GCLLIKKSVMGSLQ 387 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~Pt-Gv-G~LyVRk~~i~~L~ 387 (872)
+ .+++|+++.|++|++|+ +. .+ |+++.+++.++.+.
T Consensus 187 l---~~g~Divv~S~sK~l~g-~g~~~gG~vv~~~~~~~~l~ 224 (380)
T TIGR01325 187 L---KLGADVVVYSATKHIDG-QGRVMGGVIAGSEELMAEVA 224 (380)
T ss_pred h---hhCCCEEEeeccceecC-CCCeEEEEEEeCHHHHHHHH
Confidence 3 45899999999999986 42 24 66666666655554
No 95
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.40 E-value=2.4e-12 Score=144.43 Aligned_cols=171 Identities=12% Similarity=0.019 Sum_probs=127.5
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecc-cCchhHHHHHHHHHHcCc
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFD-YESQSVNWMAQSAKEKGA 267 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~D-hEHnSVl~~~~~AkrkGa 267 (872)
.|+||. +++.++++|+++|++ .+++|+|+|+|+.+++.++ +++||+||+... |. .....+...++..|+
T Consensus 61 r~~~pt----~~~Le~~lA~l~g~~----~~l~~~sgt~Ai~~~l~al-~~~GD~Vl~~~~~y~-~~~~~~~~~~~~~Gi 130 (394)
T PRK07050 61 LHATPT----SLALAQRLAEIEGGR----HALLQPSGLAAISLVYFGL-VKAGDDVLIPDNAYG-PNRDHGEWLARDFGI 130 (394)
T ss_pred CCCCHH----HHHHHHHHHHHhCCC----eEEEeccHHHHHHHHHHHH-hCCCCEEEEecCCcc-cHHHHHHHHHHhcCe
Confidence 456664 467888999999973 3999999999999999988 689999887643 32 223233345677899
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCc
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
++..++.. +.++++++|. ++|++|.+...+|.+|.+.+++. .+.|+++|+.+++|+++..|.
T Consensus 131 ~v~~vd~~------~~~~l~~~i~--------~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~--- 193 (394)
T PRK07050 131 TVRFYDPL------IGAGIADLIQ--------PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGL--- 193 (394)
T ss_pred EEEEECCC------CHHHHHHhcC--------CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccc---
Confidence 99887542 3456766664 36899999999999999999985 567899999999999998875
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeC-CCccccc
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKK-SVMGSLQ 387 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk-~~i~~L~ 387 (872)
.++--.+++|+++.|+.|++++ ..+ .|+++.+. ++.+.++
T Consensus 194 ~~~~l~~GaDi~v~S~tK~~~g-~~~~~gG~v~~~~~~~~~~~~ 236 (394)
T PRK07050 194 AFKPFEHGVDISVQALTKYQSG-GSDVLMGATITADAELHAKLK 236 (394)
T ss_pred ccCHHHcCCeEEEEECCceecC-CCCeeEEEEEECCHHHHHHHH
Confidence 2333345899999999999886 344 56666644 4445443
No 96
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.40 E-value=7.1e-12 Score=141.44 Aligned_cols=165 Identities=11% Similarity=0.044 Sum_probs=125.2
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.++||. .++.+++||++.|+. ..++|+++++|+..++.++ +++|++||+.....+.....+...++..|++
T Consensus 53 r~~~p~----~~~le~~lA~l~g~~----~~v~~~sG~~Ai~~al~~l-~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 123 (418)
T TIGR01326 53 RLMNPT----TDVLEQRIAALEGGV----AALAVASGQAAITYAILNL-AQAGDNIVSSSYLYGGTYNLFKHTLKRLGIE 123 (418)
T ss_pred CCCChh----HHHHHHHHHHHhCCC----eEEEEccHHHHHHHHHHHH-hCCCCEEEEECCCcHHHHHHHHHHHHHcCcE
Confidence 345554 467899999999973 3789999999999888776 5789998776321123334455667788999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
++.++.+ +.++++++|.. ++++|.+...+|.+|.+.|++. ++.|+++|+.+++|.+++.|.. .
T Consensus 124 v~~v~~~------d~~~l~~~l~~--------~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~--~ 187 (418)
T TIGR01326 124 VRFVDPD------DPEEFEKAIDE--------NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL--C 187 (418)
T ss_pred EEEECCC------CHHHHHHhcCc--------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc--C
Confidence 9988742 57788877742 5889999999999999999985 5678999999999999887642 1
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCC
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKS 381 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~ 381 (872)
..+ ..++|+++.|++|+||+ .| +|.+++.+.
T Consensus 188 ~~l-~~g~Divv~S~sK~l~g--~G~~lGg~v~~~~ 220 (418)
T TIGR01326 188 RPI-DHGADIVVHSATKYIGG--HGTAIGGVIVDGG 220 (418)
T ss_pred Cch-hcCCeEEEECccccccC--CccceEEEEEecc
Confidence 122 45899999999999985 35 788887654
No 97
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.40 E-value=7.9e-12 Score=140.86 Aligned_cols=165 Identities=15% Similarity=0.126 Sum_probs=120.5
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.++||. .+..+++||++.|+. + . ++|+|+++|+.+++.++ +++||+|++....-......+...+++.|++
T Consensus 56 R~~~p~----~~~Le~~lA~l~g~~-~--~-v~~~sG~~Ai~~~l~al-l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~ 126 (405)
T PRK08776 56 RSGNPT----RDLLGEALAELEGGA-G--G-VITATGMGAINLVLNAL-LQPGDTLVVPHDAYGGSWRLFNALAKKGHFA 126 (405)
T ss_pred CCCChH----HHHHHHHHHHHhCCC-c--e-EEEcCHHHHHHHHHHHH-hCCCCEEEEccCCchHHHHHHHHHHHhcCcE
Confidence 345554 356889999999973 2 3 45666689999999988 6899998875431122222344556677888
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+..++. .+.++|++++. ++|++|.++..+|.||.+.+++ +++.|+++|+.+++|.+++.|....+
T Consensus 127 v~~v~~------~d~~~l~~~i~--------~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~p 192 (405)
T PRK08776 127 LITADL------TDPRSLADALA--------QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKP 192 (405)
T ss_pred EEEECC------CCHHHHHHhcC--------cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 887653 25677877664 2589999999999999999997 45678999999999999887742123
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeC
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKK 380 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk 380 (872)
+ .+++|++++|+||+|++ |.+ .|+++++.
T Consensus 193 l---~~gaDivv~S~tK~l~g-~~~~~~G~vv~~~ 223 (405)
T PRK08776 193 L---EFGADLVLHSTTKYING-HSDVVGGAVVARD 223 (405)
T ss_pred c---cccCCEEEecCceeecC-CCCceEEEEEeCC
Confidence 3 36899999999999987 655 45555543
No 98
>PRK06460 hypothetical protein; Provisional
Probab=99.40 E-value=2.7e-12 Score=143.00 Aligned_cols=167 Identities=13% Similarity=0.093 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p 277 (872)
..++.|++||+++|+.+ .++|++| ++|+.+++.++ +++||+||+....-..+...+...++..|+++..++.+.
T Consensus 46 ~~~~L~~~lA~l~g~~~---~v~~~sG-~~ai~~~l~al-~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~- 119 (376)
T PRK06460 46 TVLELTKKIVELENAEM---GVAFSSG-MGAISTTALAL-LKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGS- 119 (376)
T ss_pred cHHHHHHHHHHHhCCCc---EEEeCCH-HHHHHHHHHHH-hCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCC-
Confidence 35689999999999953 4887665 68999988887 678999887532111334445566788899998876532
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCc
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPD 356 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~D 356 (872)
.+.+++++ .++|++|.++..+|.||.++|++. ++.|+++|+.+++|.+++.+....+ + ..++|
T Consensus 120 -----~~~l~~~~--------~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~--l-~~~~d 183 (376)
T PRK06460 120 -----DNIIEKAK--------SKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQKP--L-ELGAD 183 (376)
T ss_pred -----HHHHHHhc--------CCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccCCh--h-hcCCC
Confidence 22233322 236899999999999999999985 5678999999999999876642112 2 35789
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 357 FIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 357 Flv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
+++.|++|+|++ +.| .|+++.++++++.+.
T Consensus 184 ivv~S~sK~l~G-~~~~~~G~~~~~~~l~~~l~ 215 (376)
T PRK06460 184 IVVHSASKFLAG-HNDVIAGLAAGYGKLLNVID 215 (376)
T ss_pred EEEeecceeccC-CCCceEEEEecCHHHHHHHH
Confidence 999999999986 543 777777776655553
No 99
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.39 E-value=6e-12 Score=140.44 Aligned_cols=169 Identities=11% Similarity=0.041 Sum_probs=124.3
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhH-HHHHHHHHHcCc
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSV-NWMAQSAKEKGA 267 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGa 267 (872)
.|+||. ..+.+++||+++|+. + .++++|++.|+.++..++ +++|++|++... .|... ..+...+++.|+
T Consensus 57 r~~~pt----~~~Le~~lA~l~G~~-~---al~~~sG~~Ai~~~l~al-~~~Gd~Vv~~~~-~y~~~~~~~~~~~~~~gi 126 (386)
T PRK06767 57 RLGNPT----VKLFEERMAVLEGGE-E---ALAFGSGMAAISATLIGF-LKAGDHIICSNG-LYGCTYGFLEVLEEKFMI 126 (386)
T ss_pred CCCCcc----hHHHHHHHHHHhCCC-c---EEEECCHHHHHHHHHHHH-hCCCCEEEEcCC-cHHHHHHHHHHHHhhcCe
Confidence 356665 457889999999974 2 455667778999888877 688999887643 23333 333444566788
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCc
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
++..++. .+.+++++++.. +|+||.+...+|.||.+.|++ +...|+++|+.+++|.+++.+. .
T Consensus 127 ~~~~~~~------~d~~~l~~~i~~--------~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~--~ 190 (386)
T PRK06767 127 THSFCDM------ETEADIENKIRP--------NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPY--L 190 (386)
T ss_pred EEEEeCC------CCHHHHHHhhCc--------CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccc--c
Confidence 8776543 256778777742 589999999999999999997 4567899999999999987664 2
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccc
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGS 385 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~ 385 (872)
..++ ..++|+++.|++|++++ +.+ .|+++.+++.+..
T Consensus 191 ~~pl-~~g~Div~~S~sK~l~g-~g~~~gG~v~~~~~~i~~ 229 (386)
T PRK06767 191 QRPL-ELGCDAVVHSATKYIGG-HGDVVAGVTICKTRALAE 229 (386)
T ss_pred CCch-hcCCcEEEecCcceecC-CCCceeEEEEeChHHHHH
Confidence 2333 35899999999999986 544 5888877765543
No 100
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.39 E-value=4.2e-12 Score=142.00 Aligned_cols=159 Identities=13% Similarity=0.100 Sum_probs=120.3
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccCC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~p 277 (872)
..+.|++||++.|++. .++|+ ++++|+.++..++ +++||+||+... .+.+. ..+...+++.|+++..++.
T Consensus 63 ~~~Le~~lA~~~g~~~---~i~~~-sG~~Ai~~~l~al-l~~Gd~Vl~~~~-~y~~t~~~~~~~~~~~gi~~~~~d~--- 133 (388)
T PRK07811 63 RTALEEQLAALEGGAY---GRAFS-SGMAATDCLLRAV-LRPGDHIVIPND-AYGGTFRLIDKVFTRWGVEYTPVDL--- 133 (388)
T ss_pred HHHHHHHHHHHhCCCc---eEEeC-CHHHHHHHHHHHH-hCCCCEEEEcCC-CchHHHHHHHHhCcCCCeEEEEeCC---
Confidence 5689999999999864 46665 5689999999988 689999887643 23332 3333445556888887653
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCc
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPD 356 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~D 356 (872)
.+.++++++|.. +|++|.+...+|.||.+.|++ ++..|+++|+.+++|.+++.+....++ .+++|
T Consensus 134 ---~d~e~l~~~i~~--------~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~---~~gaD 199 (388)
T PRK07811 134 ---SDLDAVRAAITP--------RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPL---ALGAD 199 (388)
T ss_pred ---CCHHHHHHhcCc--------CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCch---hhCCc
Confidence 367888877742 589999999999999999998 456789999999999998777421233 35899
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeCC
Q 002866 357 FIITSFYRVFGFDPTG--FGCLLIKKS 381 (872)
Q Consensus 357 Flv~S~HK~fG~~PtG--vG~LyVRk~ 381 (872)
++++|++|++|+ |.+ .|++++++.
T Consensus 200 ivv~S~sK~l~g-~~~~~gG~vv~~~~ 225 (388)
T PRK07811 200 VVVHSTTKYIGG-HSDVVGGALVTNDE 225 (388)
T ss_pred EEEecCceeecC-CCCcEEEEEEECCH
Confidence 999999999997 655 577777643
No 101
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.39 E-value=3.1e-12 Score=143.80 Aligned_cols=166 Identities=12% Similarity=0.099 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..++.+++||+++|+.. .+.++++++|+.++..++ +++||+|++... .+.+.. .+...+++.|+++..++.
T Consensus 65 ~~~~le~~lA~l~g~~~----~i~~ssG~~Ai~~~l~al-l~~GD~Vi~~~~-~y~~~~~~~~~~~~~~Gi~v~~vd~-- 136 (398)
T PRK08249 65 TVQAFEEKVRILEGAEA----ATAFSTGMAAISNTLYTF-LKPGDRVVSIKD-TYGGTNKIFTEFLPRMGVDVTLCET-- 136 (398)
T ss_pred HHHHHHHHHHHHhCCCe----EEEeCChHHHHHHHHHHh-cCCCCEEEEcCC-chHHHHHHHHHHHhhCCeEEEEcCC--
Confidence 35789999999999842 445555588999888776 578999887643 334443 344456778999887642
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
.+.++++++|.. +|++|.+...+|.||.++|++ +++.||++|+.+++|.++..+....+ + ..++
T Consensus 137 ----~d~e~l~~~i~~--------~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~--l-~~~~ 201 (398)
T PRK08249 137 ----GDHEQIEAEIAK--------GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNP--L-ALGA 201 (398)
T ss_pred ----CCHHHHHHhcCC--------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCc--h-hhCC
Confidence 467888877742 589999999999999999997 56778999999999999886642112 2 3689
Q ss_pred cEEEEcccccCCCCCC-ce-EEEEEeCCCccccc
Q 002866 356 DFIITSFYRVFGFDPT-GF-GCLLIKKSVMGSLQ 387 (872)
Q Consensus 356 DFlv~S~HK~fG~~Pt-Gv-G~LyVRk~~i~~L~ 387 (872)
|+++.|++|++|+ +. ++ |+++.++++++.+.
T Consensus 202 Divv~S~sK~l~g-~~~~~gG~vv~~~~l~~~l~ 234 (398)
T PRK08249 202 DLVIHSATKFLSG-HADALGGVVCGSKELMEQVY 234 (398)
T ss_pred CEEeccCceecCC-CCCceEEEEECCHHHHHHHH
Confidence 9999999999985 43 24 55555555555543
No 102
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.39 E-value=1.6e-11 Score=133.73 Aligned_cols=227 Identities=14% Similarity=0.178 Sum_probs=151.3
Q ss_pred hhCCCCCCchhHHHHHhhcccCCC-CceecccCC--CCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHH
Q 002866 125 TMYPKYQSSDKIDQLRANEYLHLS-PKVCLDYCG--FGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHD 201 (872)
Q Consensus 125 ~~~p~y~~t~~ID~lR~~EFP~L~-~~IYLDyAA--tgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~iee 201 (872)
...+.|.....+...++ +|+.-. ..++|+-+. .+ .++.+++++.+ .+. .+ ..|..+. ..+
T Consensus 11 ~~~~~~~~~~~~~~~~~-~~~~~~~~~i~l~~~~~~~~-~~~~~~~~~~~-------~~~-~~---~~y~~~~----~~~ 73 (361)
T PRK00950 11 KEIKPYVPGKSKEEIAR-EYGIDPESIIKLGSNENPLG-PSPKAVEAIEK-------ELS-KI---HRYPEPD----APE 73 (361)
T ss_pred hcCCCCCCCCCHHHHHH-HhCCCccceEEccCCCCCCC-CCHHHHHHHHH-------HHH-hh---cCCCCCC----HHH
Confidence 34444554445666665 466443 478886553 33 34455555322 111 11 1243332 268
Q ss_pred HHHHHHHhcCCCCCCCcEEE-eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCc
Q 002866 202 IKTRIMDHLNIPENEYGLVF-TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLK 280 (872)
Q Consensus 202 ARerIA~lLgA~~dEY~VVF-TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~ 280 (872)
.|+.||+++|++++ .|++ |+|+++++++++..+ .++|+.|++..- ....+...++..|++++.++.+. ++.
T Consensus 74 lr~~ia~~~~~~~~--~i~~~~~Ga~~~i~~~~~~~-~~~gd~vlv~~p----~y~~~~~~~~~~g~~~~~~~~~~-~~~ 145 (361)
T PRK00950 74 LREALSKYTGVPVE--NIIVGGDGMDEVIDTLMRTF-IDPGDEVIIPTP----TFSYYEISAKAHGAKPVYAKREE-DFS 145 (361)
T ss_pred HHHHHHHHhCCCHH--HEEEeCCCHHHHHHHHHHHh-cCCCCEEEEcCC----ChHHHHHHHHHcCCEEEEeecCC-CCC
Confidence 99999999999876 4888 789999999998887 478998876532 12233445677899999998654 457
Q ss_pred cCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccC--CCCCccCCCCCCCCcE
Q 002866 281 LCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLG--PKDMDSLGLSLFRPDF 357 (872)
Q Consensus 281 Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~a--G~~mipLDLs~l~~DF 357 (872)
++.+++++.+.. +++++.+++.+|.||.++|++. .+.++++|+++++|.++.. +....++ +...+.-+
T Consensus 146 ~~~~~l~~~~~~--------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~-~~~~~~vi 216 (361)
T PRK00950 146 LDVDSVLNAITE--------KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPL-ALEYDNLI 216 (361)
T ss_pred cCHHHHHHHhcc--------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHH-HHhcCCEE
Confidence 889999887742 4789999999999999999975 5567889999999999742 1110111 11222236
Q ss_pred EEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 358 IITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 358 lv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
++.|+.|.||. .| +|.++..++.+..+.
T Consensus 217 ~~~S~SK~~g~--~GlRiG~~~~~~~~~~~~~ 246 (361)
T PRK00950 217 IGRTFSKVFGL--AGLRIGYGFVPEWLIDYYM 246 (361)
T ss_pred EEEeehHhhcC--chhhcchhcCCHHHHHHHH
Confidence 77899999984 36 788888777665554
No 103
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.38 E-value=3.4e-12 Score=135.33 Aligned_cols=176 Identities=16% Similarity=0.151 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHhcCCC----CCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 198 VEHDIKTRIMDHLNIP----ENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 198 ~ieeARerIA~lLgA~----~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.+.|+.++++++.. .....++||+|+|+|+..++.++. .+|++|++... .|.++ ...++..|+++..++
T Consensus 37 ~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~-~~g~~vl~~~~-~~~~~---~~~~~~~~~~~~~i~ 111 (350)
T cd00609 37 GLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL-NPGDEVLVPDP-TYPGY---EAAARLAGAEVVPVP 111 (350)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC-CCCCEEEEcCC-CchhH---HHHHHHCCCEEEEEe
Confidence 3456777888887764 112259999999999999999884 66888876632 34444 344566889999999
Q ss_pred ccCCCCccCH--HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH----HHHHHCCcEEEeeccccCCCC--C
Q 002866 274 FKWPTLKLCS--TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM----ALAQQNHWHVLLDAGSLGPKD--M 345 (872)
Q Consensus 274 vd~p~g~Id~--edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I----~~Are~G~~VLVDAAQ~aG~~--m 345 (872)
.++.. .++. +.++..+ ++++++|.+++.+|.||..+|++.+ +.|+++|+++++|+++..+.. .
T Consensus 112 ~~~~~-~~~~~~~~~~~~~--------~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~ 182 (350)
T cd00609 112 LDEEG-GFLLDLELLEAAK--------TPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGE 182 (350)
T ss_pred ccccc-CCccCHHHHHhhc--------CccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCc
Confidence 87643 3333 3333222 3468999999999999999998744 467999999999999765320 0
Q ss_pred cc---CCCCCCCCcEEEEcccccCCCCCCceEEEEEeC-CCccccc
Q 002866 346 DS---LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKK-SVMGSLQ 387 (872)
Q Consensus 346 ip---LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk-~~i~~L~ 387 (872)
.. ......++|+++.|+||++|.++.++|++++++ ...+.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~ 228 (350)
T cd00609 183 PPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLK 228 (350)
T ss_pred ccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHH
Confidence 11 335567789999999999983255789999988 5555543
No 104
>PLN02721 threonine aldolase
Probab=99.38 E-value=1.4e-12 Score=140.64 Aligned_cols=180 Identities=9% Similarity=0.021 Sum_probs=122.7
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT 278 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~ 278 (872)
..+.|++||+++|++. +++|+++|+++.++...+...+||+|++.. ..|.++......++..|++++.+|.+. +
T Consensus 42 ~~~l~~~la~~~~~~~----~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~-~~~~~~~~~~~~~~~~g~~~~~v~~~~-~ 115 (353)
T PLN02721 42 ALRLEEEMAKIFGKEA----ALFVPSGTMGNLISVLVHCDVRGSEVILGD-NSHIHLYENGGISTLGGVHPRTVKNNE-D 115 (353)
T ss_pred HHHHHHHHHHHhCCce----eEEecCccHHHHHHHHHHccCCCCeEEEcC-ccceehhcccchhhhcCceeEecCCCc-C
Confidence 5789999999999852 677888888876666665444899988763 234322211013566899999998764 5
Q ss_pred CccCHHHHHHHHhhhhccCCCCCceEEEEeCc-cCcccchhcH---H-HHHHHHHCCcEEEeeccccCCCCC-ccCCCC-
Q 002866 279 LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQ-SRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSLGPKDM-DSLGLS- 351 (872)
Q Consensus 279 g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~v-SNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~aG~~m-ipLDLs- 351 (872)
+.++.++++++|.... +...+++++|.++.. +|.+|..+|. + +++.|+++|+++++|+++..+... ..++..
T Consensus 116 ~~~d~~~l~~~i~~~~-~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~ 194 (353)
T PLN02721 116 GTMDLDAIEAAIRPKG-DDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHR 194 (353)
T ss_pred CCcCHHHHHHHHHhcc-CCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHH
Confidence 6789999999886321 011146889999775 5678999885 3 456789999999999997644200 011221
Q ss_pred -CCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 352 -LFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 352 -~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
..++|++++|+||+|++ |.| |+++.+++.++.+.
T Consensus 195 ~~~~~d~~~~s~sK~l~~-~~G-~~~~~~~~~~~~~~ 229 (353)
T PLN02721 195 LVKAADSVSVCLSKGLGA-PVG-SVIVGSKSFIRKAK 229 (353)
T ss_pred HhhhCCEEEEecccccCC-cee-eEEecCHHHHHhHH
Confidence 23789999999999997 655 34666666655543
No 105
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.38 E-value=9.6e-12 Score=140.01 Aligned_cols=166 Identities=14% Similarity=0.031 Sum_probs=126.4
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.|+||. .++..+++|++.|+. ..++++|++.|+..+..++ +++||+|++...........+...+++.|++
T Consensus 66 r~~~p~----~~~le~~lA~l~g~~----~al~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~ 136 (403)
T PRK07810 66 RYGNPT----VSMFEERLRLIEGAE----ACFATASGMSAVFTALGAL-LGAGDRLVAARSLFGSCFVVCNEILPRWGVE 136 (403)
T ss_pred CCCCch----HHHHHHHHHHHhCCC----cEEEECChHHHHHHHHHHH-hCCCCEEEEccCCcchHHHHHHHHHHHcCcE
Confidence 467775 457889999999975 2788899999998888776 5789998876432123334455667788999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+++++.. +.++++++|.. +|++|.+...+|.+|.+.|++ +++.||++|+.|++|.+++.|....+
T Consensus 137 v~~vd~~------d~~~l~~ai~~--------~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~ 202 (403)
T PRK07810 137 TVFVDGE------DLSQWEEALSV--------PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRG 202 (403)
T ss_pred EEEECCC------CHHHHHHhcCc--------CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCCh
Confidence 9988642 67888887753 589999999999999999998 55678999999999999887752123
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc---eEEEEEeCCC
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG---FGCLLIKKSV 382 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG---vG~LyVRk~~ 382 (872)
+ .+++|++++|++|++++ .| .|+++.+++.
T Consensus 203 ~---~~gaDivv~S~tK~l~g--~g~~~gG~v~~~~~~ 235 (403)
T PRK07810 203 L---PLGADVVVYSGTKHIDG--QGRVLGGAILGDREY 235 (403)
T ss_pred h---hcCCcEEEccCCceecC--CcCceeEEEEeChHH
Confidence 3 45899999999999985 34 4666655543
No 106
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.38 E-value=4.5e-12 Score=140.26 Aligned_cols=168 Identities=11% Similarity=0.031 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p 277 (872)
...+.++++|+++|+. ..++++++++|+.+++.++ .++|++|++.....+.....+...++..|+++..++.+
T Consensus 41 ~~~~le~~la~l~g~~----~a~~~~sG~~Ai~~~l~~l-~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-- 113 (369)
T cd00614 41 TVDALEKKLAALEGGE----AALAFSSGMAAISTVLLAL-LKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD-- 113 (369)
T ss_pred hHHHHHHHHHHHHCCC----CEEEEcCHHHHHHHHHHHH-cCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC--
Confidence 3467888999999974 2667788899999999887 57899987764322233333445566789999887653
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCc
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPD 356 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~D 356 (872)
+.+++++++.. ++++|.+...+|++|.+.|++. ++.||++|+.+++|.++..|.. ...-.+++|
T Consensus 114 ----d~~~l~~~i~~--------~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~---~~~~~~g~D 178 (369)
T cd00614 114 ----DPEALEAAIKP--------ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL---QRPLELGAD 178 (369)
T ss_pred ----CHHHHHHhcCC--------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc---CChhhhCCc
Confidence 36777777642 5899999999999999999985 5678999999999999877741 122245899
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeC-CCcccccC
Q 002866 357 FIITSFYRVFGFDPTG--FGCLLIKK-SVMGSLQN 388 (872)
Q Consensus 357 Flv~S~HK~fG~~PtG--vG~LyVRk-~~i~~L~P 388 (872)
+++.|++|++|+ |.. .|+++.++ ++++.+..
T Consensus 179 ivv~S~tK~l~g-~~~~~gG~v~~~~~~l~~~l~~ 212 (369)
T cd00614 179 IVVHSATKYIGG-HSDVIAGVVVGSGEALIQRLRF 212 (369)
T ss_pred EEEeccceeccC-CCCceEEEEEeCcHHHHHHHHH
Confidence 999999999986 432 68888876 66665543
No 107
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.38 E-value=2.4e-11 Score=134.84 Aligned_cols=215 Identities=12% Similarity=0.060 Sum_probs=146.5
Q ss_pred CCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc-hHHHHHHHHHHHHHhcCCCCC-CCcEEEeCC
Q 002866 148 SPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAE-KGTVEHDIKTRIMDHLNIPEN-EYGLVFTVS 224 (872)
Q Consensus 148 ~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps-S~~~ieeARerIA~lLgA~~d-EY~VVFTsn 224 (872)
.+.++|+-+...+ .|+.+.+++.+ ...+.. ...|+.+. .....+.+++.+++++|++.+ +..|++|+|
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~--------~~~~~~-~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G 97 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNN--------FLANPE-NHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAG 97 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHH--------HHhCCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCC
Confidence 3578888777663 56667766432 112211 11343322 246778889999999997532 336999999
Q ss_pred HHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceE
Q 002866 225 RGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGL 304 (872)
Q Consensus 225 ATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~L 304 (872)
+++|+.+++.++ +.+||+|++..- .+.... ..++..|++++.++.+. +..++.+++++.+.. ++++
T Consensus 98 ~~~~l~~~~~~~-~~~gd~Vlv~~P-~y~~~~---~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~--------~~kl 163 (389)
T PRK05957 98 SNMAFMNAILAI-TDPGDEIILNTP-YYFNHE---MAITMAGCQPILVPTDD-NYQLQPEAIEQAITP--------KTRA 163 (389)
T ss_pred hHHHHHHHHHHh-cCCCCEEEEeCC-CCcCHH---HHHHhcCCEEEEeecCC-CCCcCHHHHHHhcCc--------CceE
Confidence 999999988877 578999887521 122222 23456799999999864 457899999987742 5889
Q ss_pred EEEeCccCcccchhc---HH-HHHHHHHCCcEEEeecccc----CCCCCcc-CCC-CCCCCcEEEEcccccCCCCCCc--
Q 002866 305 FVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSL----GPKDMDS-LGL-SLFRPDFIITSFYRVFGFDPTG-- 372 (872)
Q Consensus 305 Va~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~----aG~~mip-LDL-s~l~~DFlv~S~HK~fG~~PtG-- 372 (872)
+++++.+|.||.++| ++ +++.|+++|+++++|.+-. .+..+.+ ..+ ....--+++.|+-|.|| +.|
T Consensus 164 v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g--~~GlR 241 (389)
T PRK05957 164 IVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYG--FASWR 241 (389)
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhcc--Cccce
Confidence 999999999999999 44 4577899999999999832 1110011 111 11223477888999998 458
Q ss_pred eEEEEEeCCCccccc
Q 002866 373 FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 vG~LyVRk~~i~~L~ 387 (872)
+|++++.++.++.+.
T Consensus 242 iG~~~~~~~~~~~~~ 256 (389)
T PRK05957 242 IGYMVIPIHLLEAIK 256 (389)
T ss_pred eEEEecCHHHHHHHH
Confidence 999998877766654
No 108
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.38 E-value=1.3e-11 Score=137.78 Aligned_cols=163 Identities=12% Similarity=0.080 Sum_probs=118.9
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.++||. ....++++|++.|+.. .| +++|++.|+.++... +++|++|++....-......+...+++.|++
T Consensus 46 r~~~p~----~~~Le~~la~l~g~~~---al-~~~SG~~Al~~~l~~--l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~ 115 (380)
T PRK06176 46 RSGNPT----RFALEELIADLEGGVK---GF-AFASGLAGIHAVFSL--FQSGDHVLLGDDVYGGTFRLFDKVLVKNGLS 115 (380)
T ss_pred CCCChh----HHHHHHHHHHHhCCCC---EE-EECCHHHHHHHHHHH--cCCCCEEEEcCCChhHHHHHHHHHHHhcCeE
Confidence 457775 4578889999999743 35 456667899887753 4789998876431123344455667888999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+..++. .+.+++++++. ++|++|.+...+|.+|.+.|++ +++.||++|+++++|.+++.+....+
T Consensus 116 v~~vd~------~d~e~l~~ai~--------~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p 181 (380)
T PRK06176 116 CTIIDT------SDLSQIKKAIK--------PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNP 181 (380)
T ss_pred EEEcCC------CCHHHHHHhcC--------cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCc
Confidence 887754 25778877664 2589999999999999999998 55788999999999999876642123
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc-eEE-EEEe
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG-FGC-LLIK 379 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG-vG~-LyVR 379 (872)
+ .+++|++++|++|++++ |.. +|. ++.+
T Consensus 182 ~---~~gaDivv~S~tK~l~g-~~d~~gG~vv~~ 211 (380)
T PRK06176 182 L---LLGADIVVHSGTKYLGG-HSDVVAGLVTTN 211 (380)
T ss_pred c---ccCCCEEEecCceeccC-CccceeeEEEec
Confidence 3 46899999999999987 543 344 4433
No 109
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.37 E-value=1.1e-11 Score=137.62 Aligned_cols=160 Identities=11% Similarity=0.019 Sum_probs=115.9
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.|+||. ..+.+++||++. .++ .++++|+++|+.+++.++ +++||+||+.....+.........+++.|++
T Consensus 47 ry~~p~----~~~Le~~lA~l~--~~~---~v~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~ 116 (366)
T PRK07582 47 RASNPT----WRALEAALGELE--GAE---ALVFPSGMAAITAVLRAL-LRPGDTVVVPADGYYQVRALAREYLAPLGVT 116 (366)
T ss_pred CCCCcc----HHHHHHHHHHHc--CCC---EEEECCHHHHHHHHHHHh-cCCCCEEEEeCCCcHhHHHHHHHHHhcCeEE
Confidence 456665 357888999998 222 667778889999999887 6899998876432223322233445668999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
++.++.+.. . . .+. ++|+||.+...+|.+|.+.|++ +++.||++|+.++||.+++.+....+
T Consensus 117 v~~v~~~~~------~--~-~~~--------~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p 179 (366)
T PRK07582 117 VREAPTAGM------A--E-AAL--------AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRP 179 (366)
T ss_pred EEEECCCCh------H--H-Hhc--------cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCc
Confidence 999876431 1 1 121 2589999999999999999998 55678999999999999753322245
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCce--EEEEEe
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGF--GCLLIK 379 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGv--G~LyVR 379 (872)
++ +++|+++.|+|||+++ |.|+ |+++.+
T Consensus 180 ~~---~g~Divv~S~sK~l~G-~~g~~~G~v~~~ 209 (366)
T PRK07582 180 LE---LGADLVVASDTKALTG-HSDLLLGYVAGR 209 (366)
T ss_pred hh---cCCcEEEecccccccC-CCCeeEEEEEcC
Confidence 54 5789999999999987 7774 777654
No 110
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.36 E-value=2.6e-12 Score=137.67 Aligned_cols=177 Identities=15% Similarity=0.089 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
...+++++.+++++| + + .++||.|+|+|+.+++.++ +++|+.|++.. ..|.++......++..|+++..++.+.
T Consensus 32 ~~~~~l~~~~a~~~g-~-~--~~~~~~~gt~a~~~~~~~l-~~~gd~v~~~~-~~~~~~~~~~~~~~~~g~~~~~v~~~~ 105 (338)
T cd06502 32 PTTAKLEARAAELFG-K-E--AALFVPSGTAANQLALAAH-TQPGGSVICHE-TAHIYTDEAGAPEFLSGVKLLPVPGEN 105 (338)
T ss_pred HHHHHHHHHHHHHhC-C-C--eEEEecCchHHHHHHHHHh-cCCCCeEEEec-CcceeeecCCcHHHHcCceEEeecCCC
Confidence 456789999999999 3 3 4999999999999998887 57899987653 234433211122334799999998753
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc------CCCCCc
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL------GPKDMD 346 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~------aG~~mi 346 (872)
+.++.++|++++....+ ...+++++|.+++.+|. |..+|.+ +++.|+++|+++++|+|+. .|.
T Consensus 106 --~~~d~~~l~~~i~~~~~-~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--- 178 (338)
T cd06502 106 --GKLTPEDLEAAIRPRDD-IHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGV--- 178 (338)
T ss_pred --CcCCHHHHHHHhhccCC-CcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC---
Confidence 56899999998864210 11236899999999995 7655653 3466789999999998752 221
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+++.-..++|++++|+|||||. | |.++++.+++.++.+++
T Consensus 179 ~~~~~~~~~d~~~~s~sK~~~~-~-~g~~~~~~~~~~~~~~~ 218 (338)
T cd06502 179 ALKTYKSGVDSVSFCLSKGGGA-P-VGAVVVGNRDFIARARR 218 (338)
T ss_pred CHHHHHhcCCEEEEeccccCCC-c-cceEEECCHHHHHHHHH
Confidence 2221124789999999999996 5 43345567677666653
No 111
>PLN02263 serine decarboxylase
Probab=99.35 E-value=5.1e-11 Score=136.58 Aligned_cols=178 Identities=12% Similarity=0.054 Sum_probs=131.3
Q ss_pred chHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 194 EKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 194 sS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
++.++..++=+-+++++|.+++++.=+||+|+|+|+-+..... .+.+...++++ +.-|.|+. +.++-.|++++.|
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S-~~aH~Sv~---KAa~llgi~~~~V 205 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYAS-RESHYSVF---KAARMYRMECVKV 205 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEc-CCccHHHH---HHHHhcCCcceEe
Confidence 3557778888999999999876666789999999966533321 11122234444 44567675 4455579999999
Q ss_pred eccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCc-----EEEeeccccCCC---
Q 002866 273 WFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHW-----HVLLDAGSLGPK--- 343 (872)
Q Consensus 273 pvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~-----~VLVDAAQ~aG~--- 343 (872)
|++. +++++.++|+++|.+.. .+.-+|+.+.-+-.+|++=||+.| ..|+++|+ ++|||||=.+..
T Consensus 206 p~d~-~g~mD~~aL~~aI~~d~-----~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf 279 (470)
T PLN02263 206 DTLV-SGEIDCADFKAKLLANK-----DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPF 279 (470)
T ss_pred ccCC-CCcCcHHHHHHHHHhCC-----CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhh
Confidence 9975 68999999999997531 245688888999999999999855 56788886 999999942211
Q ss_pred --CCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCc
Q 002866 344 --DMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVM 383 (872)
Q Consensus 344 --~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i 383 (872)
..-++|... ++|-+++++|||++. |.++|++++|+...
T Consensus 280 ~~~~~~~df~~-~vDSIsvD~HK~l~~-P~~cgvll~R~~~~ 319 (470)
T PLN02263 280 VKRAPKVTFKK-PIGSVSVSGHKFVGC-PMPCGVQITRMEHI 319 (470)
T ss_pred cccccccCCCc-CccEEEECCccccCC-CcCEEEEEEehhhH
Confidence 001356543 499999999999998 99999999997543
No 112
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.35 E-value=4.2e-11 Score=128.79 Aligned_cols=166 Identities=13% Similarity=0.136 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....+.|++++++++.+ + .|++|+|+++.+ .++..+ +++|+.|++. +..|.+... .++..|+++..++.
T Consensus 61 ~~~~~l~~~la~~~~~~-~--~i~~~~G~~~~~-~~l~~~-~~~gd~v~~~-~~~~~~~~~---~~~~~g~~~~~~~~-- 129 (360)
T TIGR00858 61 PLHEELEEELAEWKGTE-A--ALLFSSGYLANV-GVISAL-VGKGDLILSD-ALNHASLID---GCRLSGARVRRYRH-- 129 (360)
T ss_pred HHHHHHHHHHHHHhCCC-C--EEEECchHHHHH-HHHHHh-CCCCCEEEEE-ccccHHHHH---HHHhcCCceEEecC--
Confidence 46778999999999963 2 588877755544 455555 5789988765 344555533 24456888877652
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCcc--------
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDS-------- 347 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mip-------- 347 (872)
++.++|++.+... .+.+++++.++++.|.||.+.|++. ++.|+++|+++++|.++..+. .+
T Consensus 130 ----~d~~~l~~~~~~~----~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~--~~~~~~~~~~ 199 (360)
T TIGR00858 130 ----NDVEHLERLLEKN----RGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGV--LGEDGRGTLE 199 (360)
T ss_pred ----CCHHHHHHHHHHc----ccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccC--cCCCCCchHH
Confidence 4678888888642 1135789999999999999999985 567899999999999987653 11
Q ss_pred -CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 348 -LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 348 -LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
.++...+.|+++.|++|+|| |.| |+++.+++.++.+
T Consensus 200 ~~~~~~~~~~i~i~s~sK~~~--~~g-G~~~~~~~~~~~~ 236 (360)
T TIGR00858 200 HFGLKPEPVDIQVGTLSKALG--SYG-AYVAGSQALIDYL 236 (360)
T ss_pred hcCCCccCCcEEEEechhhhh--ccC-cEEEcCHHHHHHH
Confidence 12223467999999999998 567 8777776655444
No 113
>PRK07908 hypothetical protein; Provisional
Probab=99.35 E-value=2.4e-11 Score=132.44 Aligned_cols=203 Identities=13% Similarity=0.115 Sum_probs=133.1
Q ss_pred CCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHH
Q 002866 148 SPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRG 226 (872)
Q Consensus 148 ~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnAT 226 (872)
.+.+.|+.+-..+ .|+.+++++.+ .+. .+ ..|..+ .-....|+.||+++|++++ +|++|+|++
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~-~~---~~Y~~~---~g~~~lr~aia~~~~~~~~--~I~it~Ga~ 85 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAA-------RLG-DL---AAYPST---EDERRARAAVAARHGRTPD--EVLLLAGAA 85 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHH-------Hhh-Hh---hcCCCc---cchHHHHHHHHHHhCcChh--hEEECCCHH
Confidence 4467777765543 45666766432 111 11 124322 2346799999999999886 499999999
Q ss_pred HHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEE
Q 002866 227 SAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFV 306 (872)
Q Consensus 227 eALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa 306 (872)
+|+.+++. +++++.++. +++.......++..|+++..+|++.. ..++.+.+ . .+++++.
T Consensus 86 ~al~~~~~---l~~~~viv~-----~P~y~~~~~~~~~~G~~i~~v~~~~~-~~~d~~~l----~--------~~~~~i~ 144 (349)
T PRK07908 86 EGFALLAR---LRPRRAAVV-----HPSFTEPEAALRAAGIPVHRVVLDPP-FRLDPAAV----P--------DDADLVV 144 (349)
T ss_pred HHHHHHHh---cCCCeEEEe-----CCCChHHHHHHHHcCCEEEeeccCcc-cCcChhHh----c--------cCCCEEE
Confidence 99999998 455544433 23444444567778999999998753 45666533 2 1478999
Q ss_pred EeCccCcccchhcHHHHHHHHHCCcEEEeecccc--CCCCCccCCCCCCC-CcEE-EEcccccCCCCCCceEEEEEeCCC
Q 002866 307 FPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSL--GPKDMDSLGLSLFR-PDFI-ITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 307 ~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~--aG~~mipLDLs~l~-~DFl-v~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
+++.+|.||+++|.+.+....+++.++++|.++. .... +..+.... .+++ +.|++|.||.+...+|.+++.++.
T Consensus 145 l~np~NPTG~~~~~~~l~~l~~~~~~iIvDe~y~~~~~~~--~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~ 222 (349)
T PRK07908 145 IGNPTNPTSVLHPAEQLLALRRPGRILVVDEAFADAVPGE--PESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDV 222 (349)
T ss_pred EcCCCCCCCCCcCHHHHHHHHhcCCEEEEECcchhhccCC--ccccccccCCCEEEEeecccccCCccceeeeeecCHHH
Confidence 9999999999999986543334577888999863 3221 23332222 2444 459999988212236999998888
Q ss_pred cccccCC
Q 002866 383 MGSLQNQ 389 (872)
Q Consensus 383 i~~L~P~ 389 (872)
++.+.+.
T Consensus 223 ~~~~~~~ 229 (349)
T PRK07908 223 LARLTRG 229 (349)
T ss_pred HHHHHhc
Confidence 7777643
No 114
>PRK05968 hypothetical protein; Provisional
Probab=99.34 E-value=1.5e-11 Score=137.66 Aligned_cols=164 Identities=13% Similarity=0.097 Sum_probs=122.3
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchh-HHHHHHHHHHcCcEEEEEeccCC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQS-VNWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnS-Vl~~~~~AkrkGaeV~~Vpvd~p 277 (872)
+++.++++|+++|++. .|+| +++|.|+.++..++ +++||+||+... .|.. ...+...++..|+++.+++.+
T Consensus 65 ~~~le~~lA~l~g~~~---av~~-~sG~~Ai~~al~al-~~~Gd~Vl~~~~-~y~~t~~~~~~~~~~~G~~v~~vd~~-- 136 (389)
T PRK05968 65 VRAFEEMLAKLEGAED---ARGF-ASGMAAISSTVLSF-VEPGDRIVAVRH-VYPDAFRLFETILKRMGVEVDYVDGR-- 136 (389)
T ss_pred HHHHHHHHHHHhCCCc---EEEE-CCHHHHHHHHHHHH-hCCCCEEEEeCC-CchHHHHHHHHHHHHcCceEEEeCCC--
Confidence 6789999999999953 4655 56678998877765 688999887643 3333 334555677789999987642
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCc
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPD 356 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~D 356 (872)
+.+++++++. +|+||.+...+|.++.+.|++ +.+.||++|+.+++|++++.+....++ .+++|
T Consensus 137 ----d~~~l~~~i~---------~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~---~~g~D 200 (389)
T PRK05968 137 ----DEEAVAKALP---------GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPI---TLGVD 200 (389)
T ss_pred ----CHHHHHHhcc---------cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCch---hcCCc
Confidence 5677776652 478999999999999999997 456789999999999998776311233 35899
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 357 FIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 357 Flv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
++++|++|++++ |.+ .|+++.+++.++.+.
T Consensus 201 ivv~S~tK~l~g-~~~~~gG~i~~~~~~~~~l~ 232 (389)
T PRK05968 201 LVIHSASKYLGG-HSDTVAGVVAGSKEHIARIN 232 (389)
T ss_pred EEEeeccccccC-CCCeEEEEEEECHHHHHHHH
Confidence 999999999997 765 577776766555443
No 115
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.34 E-value=4.3e-11 Score=129.89 Aligned_cols=232 Identities=15% Similarity=0.113 Sum_probs=158.4
Q ss_pred hHHHHHhhcccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhc-cCcCcCCCchHHHHHHHHHHHHHhcCCC
Q 002866 135 KIDQLRANEYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLS-NHALYGGAEKGTVEHDIKTRIMDHLNIP 213 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~-~~~~ygNpsS~~~ieeARerIA~lLgA~ 213 (872)
.+..+|. .|..-.+.||||-++-+..|+.+..+..+. ...+...-+. ++.. +.+.-..+-+..=.++|-++|+.
T Consensus 18 pl~~lr~-~f~lp~~viyLdgnSLGa~p~~~~a~~~q~---a~deW~~~lirsw~~-a~~~W~~lp~~lgdklApLiGA~ 92 (407)
T COG3844 18 PLAKLRD-RFALPGGVIYLDGNSLGARPRAVTARLQQV---ATDEWGEGLIRSWNK-AKADWFDLPERLGDKLAPLIGAR 92 (407)
T ss_pred chhhhHh-hccCCCCeEEeeccccccCchHHHHHHHHH---HHHHHHhhhhhhhcc-cCCchhhchhHHHHHhhhhhcCC
Confidence 4677886 476666799999999999996554442110 0001111111 0100 12222345556778999999999
Q ss_pred CCCCcEEEeCCHHHHH-HHHHhhCCCCCCCeEEEecccCchhHHHHHH-HHHHcCcEEEEEeccCCCCccCHHHHHHHHh
Q 002866 214 ENEYGLVFTVSRGSAF-KLLAESYPFHTNKKLLTMFDYESQSVNWMAQ-SAKEKGAKVYSAWFKWPTLKLCSTDLRKQIS 291 (872)
Q Consensus 214 ~dEY~VVFTsnATeAL-nLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~-~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~ 291 (872)
+.| ||.|.+++--+ +.++.+|..++|+.+|+.-...-++=+.+.+ .++-.|..... .+.+.+.++++.+.
T Consensus 93 ~~E--vvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~------~~~~~P~~~~~~~~ 164 (407)
T COG3844 93 AGE--VVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDL------EGVIAPRALEEAIT 164 (407)
T ss_pred CCc--eEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccc------eeeeChHHHHHhhc
Confidence 886 88887776654 4566678778888876553222222222221 12222222111 24566778888776
Q ss_pred hhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCC
Q 002866 292 SKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 292 ~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~P 370 (872)
. .+.+|.+++++..||+.+++..| +.||++|+++..|-|+++|. +|+||-..++||-+.+.||++-+.|
T Consensus 165 d--------d~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGa--vp~~Lh~~gaDfaigcsyKYLNgGP 234 (407)
T COG3844 165 D--------DVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGA--VPVDLHAAGADFAIGCSYKYLNGGP 234 (407)
T ss_pred c--------ceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCC--cceeecccCCCeeeeeeceeccCCC
Confidence 4 59999999999999999999865 67899999999999999997 8999999999999999999854339
Q ss_pred CceEEEEEeCCCcccccCC
Q 002866 371 TGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 371 tGvG~LyVRk~~i~~L~P~ 389 (872)
-+.++|||.++..+...|+
T Consensus 235 Gapa~l~v~~~h~e~~~~~ 253 (407)
T COG3844 235 GAPAGLFVAPRHRERSWPP 253 (407)
T ss_pred CCceeEEeccccccccccc
Confidence 9999999999887665444
No 116
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.33 E-value=2.3e-11 Score=136.54 Aligned_cols=170 Identities=11% Similarity=0.079 Sum_probs=126.9
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhH-HHHHHHHHHcCcE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAK 268 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGae 268 (872)
|+||. ..+.+++||++.|.+ .+++|+|+++|+.+++.++ +++|++|++... .|.+. ..+...++..|++
T Consensus 61 ~~~p~----~~~Le~~iA~~~g~~----~~l~~~sG~~Ai~~al~~l-l~~Gd~Vl~~~~-~y~~~~~~~~~~~~~~G~~ 130 (400)
T PRK06234 61 LGNPT----STEVENKLALLEGGE----AAVVAASGMGAISSSLWSA-LKAGDHVVASDT-LYGCTFALLNHGLTRYGVE 130 (400)
T ss_pred CCCcc----HHHHHHHHHHHhCCC----cEEEEcCHHHHHHHHHHHH-hCCCCEEEEecC-ccchHHHHHHHHHhhCCeE
Confidence 45665 457899999999973 2678888899998877766 578999887643 23333 3334556778999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHC--CcEEEeeccccCCCCC
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQN--HWHVLLDAGSLGPKDM 345 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~--G~~VLVDAAQ~aG~~m 345 (872)
+.+++.. +.++++++|.. +|++|.+...+|+||.+.|++ +++.|+++ |+.+++|.+...+...
T Consensus 131 v~~vd~~------d~e~l~~~i~~--------~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~ 196 (400)
T PRK06234 131 VTFVDTS------NLEEVRNALKA--------NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQ 196 (400)
T ss_pred EEEECCC------CHHHHHHHhcc--------CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcC
Confidence 9988653 57888887753 589999999999999999997 45678886 9999999998766421
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
.++ ..++|+++.|++|++++ |.. .|+++.+++.++.++
T Consensus 197 ~~l---~~g~Divv~S~sK~l~g-~g~~~gG~v~~~~~~~~~l~ 236 (400)
T PRK06234 197 RPL---QLGADVVVHSATKYLNG-HGDVIAGFVVGKEEFINQVK 236 (400)
T ss_pred Cch---hhCCcEEEeeccccccC-CCCceeEEEEecHHHHHHHH
Confidence 122 35899999999999986 432 588888877655543
No 117
>PRK07337 aminotransferase; Validated
Probab=99.32 E-value=5e-11 Score=131.77 Aligned_cols=209 Identities=12% Similarity=0.105 Sum_probs=140.1
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----C--CCCCCCcEEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----N--IPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----g--A~~dEY~VVF 221 (872)
..++|+.+...+ .++.+.+++.+ .+...+ ..|+.+. -..+.|+.||+++ | ++++ +|++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~Y~~~~---g~~~lr~~ia~~~~~~~~~~~~~~--~i~~ 95 (388)
T PRK07337 31 DIIHMGIGEPDFTAPEPVVEAAAR-------ALRRGV---TQYTSAL---GLAPLREAIAAWYARRFGLDVAPE--RIVV 95 (388)
T ss_pred CEEEeCCcCCCCCCCHHHHHHHHH-------HHhcCC---CCCCCCC---CCHHHHHHHHHHHHHHhCCCCChH--hEEE
Confidence 479999988764 45566665322 111111 1343321 2457888899887 4 4554 5999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHHHhhhhccCCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~I~~~~rr~~~~ 300 (872)
|+|+|+|+.+++..+ .++||+|++.. ..+... ...++..|++++.+|++.. +..++.+++++.+..
T Consensus 96 t~G~~~al~~~~~~l-~~~gd~Vlv~~-p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------- 162 (388)
T PRK07337 96 TAGASAALLLACLAL-VERGDEVLMPD-PSYPCN---RHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE-------- 162 (388)
T ss_pred ecCcHHHHHHHHHHh-cCCCCEEEEeC-CCchhh---HHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc--------
Confidence 999999999999988 57899987653 223333 2334567999999998642 346888988877742
Q ss_pred CceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecc-ccCCCCCccCCCCCCCCcEE-EEcccccCCCCCCc--
Q 002866 301 AAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAG-SLGPKDMDSLGLSLFRPDFI-ITSFYRVFGFDPTG-- 372 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAA-Q~aG~~mipLDLs~l~~DFl-v~S~HK~fG~~PtG-- 372 (872)
+++++.++..+|.||..++.+ +++.|+++++++++|-+ +....+..+.....+..+.+ +.|+.|.||. .|
T Consensus 163 ~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~--~G~R 240 (388)
T PRK07337 163 RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNM--TGWR 240 (388)
T ss_pred cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCC--chhh
Confidence 578999999999999999964 34667899999999976 32221101122223345554 5699999984 36
Q ss_pred eEEEEEeCCCccccc
Q 002866 373 FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 vG~LyVRk~~i~~L~ 387 (872)
+|++++.++.++.+.
T Consensus 241 iG~~~~~~~l~~~l~ 255 (388)
T PRK07337 241 LGWLVVPEALVGTFE 255 (388)
T ss_pred eeeeecCHHHHHHHH
Confidence 899998766555443
No 118
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.32 E-value=4.7e-11 Score=136.85 Aligned_cols=175 Identities=12% Similarity=0.078 Sum_probs=126.6
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP- 277 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p- 277 (872)
+.+.|++|+++++.. .|++|.|+|+|+.++..++ +++|| |++..-| ..+...+ .+..|++++.++++..
T Consensus 80 ~~~Lreaia~~~~~~----~vv~t~ggt~A~~~~~~al-l~pGD-Vii~~p~-~~~~~~~---i~~~G~~~v~v~~~~~~ 149 (460)
T PRK13238 80 YYRLEDAVKDIFGYP----YTIPTHQGRAAEQILFPVL-IKKGD-VVPSNYH-FDTTRAH---IELNGATAVDLVIDEAL 149 (460)
T ss_pred HHHHHHHHHHHhCCC----cEEECCCHHHHHHHHHHHh-CCCCC-EEccCCc-ccchHHH---HHHcCCEEEEEeccccc
Confidence 567899999999973 3899999999999998887 78999 6654222 2223232 2447999999998531
Q ss_pred --------CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCccc-chhcHH----HHHHHHHCCcEEEeeccccCCCC
Q 002866 278 --------TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTG-AKYSYQ----WMALAQQNHWHVLLDAGSLGPKD 344 (872)
Q Consensus 278 --------~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG-~i~PLe----~I~~Are~G~~VLVDAAQ~aG~~ 344 (872)
.+.++.++|+++|... ..++|+++++...+|.|| +.++.+ +.+.|+++|+++++|+|++...-
T Consensus 150 ~~~~~~~f~g~id~e~Le~~i~~~----~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a 225 (460)
T PRK13238 150 DTGSRHPFKGNFDLEKLEALIEEV----GAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENA 225 (460)
T ss_pred cccccccccCCcCHHHHHHHHhhc----CCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhh
Confidence 2459999999999742 113699999999999998 777764 33567999999999999865310
Q ss_pred ---------CccCCCCC------CCCcEEEEcccccCCCCCCceEEEEEeC-CCcccccCC
Q 002866 345 ---------MDSLGLSL------FRPDFIITSFYRVFGFDPTGFGCLLIKK-SVMGSLQNQ 389 (872)
Q Consensus 345 ---------mipLDLs~------l~~DFlv~S~HK~fG~~PtGvG~LyVRk-~~i~~L~P~ 389 (872)
.....+.. ..+|++++|+||++.+ |.| |+|+.++ +++..++..
T Consensus 226 ~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~-~~G-G~i~~~d~~l~~~~~~~ 284 (460)
T PRK13238 226 YFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMV-NIG-GLLCFRDEDLFTECRTL 284 (460)
T ss_pred hhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCC-cce-eEEEcChHHHHHHhhhc
Confidence 01222221 2489999999998766 777 8888884 566666543
No 119
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.32 E-value=1.3e-11 Score=149.88 Aligned_cols=176 Identities=13% Similarity=0.098 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH----HHHHHhhCCCCC---CC-eEEE-ecccCchhHHHHHHHHHHcC
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA----FKLLAESYPFHT---NK-KLLT-MFDYESQSVNWMAQSAKEKG 266 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA----LnLVaeslpf~~---Gd-~ILT-~~DhEHnSVl~~~~~AkrkG 266 (872)
.+.+.+..+.+++++|.+. +-|-+|++.- .-+++..|.-.+ ++ .+|+ ...|.+|.. .+...|
T Consensus 542 lq~i~elq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa-----sa~~~G 612 (954)
T PRK12566 542 RAMIDELEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA-----SAQMAG 612 (954)
T ss_pred HHHHHHHHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH-----HHHHCC
Confidence 4788888899999999963 4566655542 233444443222 22 3444 334544421 255679
Q ss_pred cEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCC
Q 002866 267 AKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDM 345 (872)
Q Consensus 267 aeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~m 345 (872)
++|+.+|++. +|.+|.++|+++|.+. .+++..|.+++.++..+...|++ +++.||++|+.|++|+||..+.
T Consensus 613 ieVv~Vp~D~-~G~iDle~L~a~I~~~-----~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~-- 684 (954)
T PRK12566 613 MRVVIVECDP-DGNVDLDDLKAKAAAA-----GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQ-- 684 (954)
T ss_pred CEEEEeccCC-CCCcCHHHHHHHhhcc-----CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhc--
Confidence 9999999985 7899999999999632 24577778888777777778897 5578899999999999998775
Q ss_pred ccCC-CCCCCCcEEEEcccccCCCCCCceEEEEEeC-CCcccccCC
Q 002866 346 DSLG-LSLFRPDFIITSFYRVFGFDPTGFGCLLIKK-SVMGSLQNQ 389 (872)
Q Consensus 346 ipLD-Ls~l~~DFlv~S~HK~fG~~PtGvG~LyVRk-~~i~~L~P~ 389 (872)
..++ ..++++||+++++|||||. |.|.|++|+.. ...+.|.|.
T Consensus 685 ~~l~~Pg~~GADi~~~s~HKtf~~-P~G~GGP~vG~iav~~~L~pf 729 (954)
T PRK12566 685 VGLARPADIGADVSHMNLHKTFCI-PHGGGGPGMGPIGVRAHLAPF 729 (954)
T ss_pred cCCCChhhcCCCEEEecCCcccCc-CccCCCCccchhhhhhhhhhh
Confidence 4666 4789999999999999999 99999999998 777767664
No 120
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.32 E-value=3.1e-11 Score=134.69 Aligned_cols=168 Identities=17% Similarity=0.132 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
...++..+.+++++|++ .+++|+|+|+|+++++.++.+++||+|++.. ..+.+.. ..+...|++++.++++.
T Consensus 31 ~~~~~~e~~la~~~g~~----~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~-~t~~~~~---~~~~~~G~~~v~vd~d~ 102 (376)
T TIGR02379 31 PFSRRCETWLENRTGTK----KALLTPSCTAALEMAALLLDIQPGDEVIMPS-YTFVSTA---NAFVLRGAKIVFVDIRP 102 (376)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcCCCCcCEEEECC-CCcHHHH---HHHHHcCCEEEEEecCC
Confidence 34566777888888873 3999999999999999988888999988753 3344433 23345799999999987
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
.+..++.+++++++.. +|++|.. +|.+|...|++ +++.|+++|+.|+.|++|+.|. .++-...+.
T Consensus 103 ~~~~~d~~~le~~i~~--------~tk~Iip---~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~---~~~~~~~g~ 168 (376)
T TIGR02379 103 DTMNIDETLIESAITH--------RTKAIVP---VHYAGVACDMDTIMALANKHQLFVIEDAAQGVMS---TYKGRALGS 168 (376)
T ss_pred CcCCCCHHHHHHhcCc--------CceEEEE---eCCCCCccCHHHHHHHHHHCCCEEEEECccccCC---ccCCcccCC
Confidence 6567899999887753 5788864 45789999997 5678899999999999998875 244444443
Q ss_pred --cEEEEccccc--CC-CCCCceEEEEEe-CCCcccccC
Q 002866 356 --DFIITSFYRV--FG-FDPTGFGCLLIK-KSVMGSLQN 388 (872)
Q Consensus 356 --DFlv~S~HK~--fG-~~PtGvG~LyVR-k~~i~~L~P 388 (872)
|+.+||||+. +. + +. .|+++.+ ++..+.+++
T Consensus 169 ~~~~~~fSf~~~K~l~~g-~~-gG~v~~~~~~~~~~~~~ 205 (376)
T TIGR02379 169 IGHLGTFSFHETKNYTSG-GE-GGALLINDQAFIERAEI 205 (376)
T ss_pred CCCEEEEeCCCCCcCccc-CC-ceEEEECCHHHHHHHHH
Confidence 9999999983 22 2 33 4666665 456666654
No 121
>PLN02509 cystathionine beta-lyase
Probab=99.31 E-value=4e-11 Score=137.61 Aligned_cols=158 Identities=13% Similarity=0.096 Sum_probs=117.1
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccCC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~p 277 (872)
.+...+.+|++.|+. + +++++++++|+.++.. + +++||+||+... .+.... .+...+++.|++++.++.
T Consensus 135 ~~aLE~~lA~leg~e---~-ai~~~SG~aAi~~il~-l-l~~GD~VI~~~~-~y~~t~~ll~~~l~~~G~~v~~vd~--- 204 (464)
T PLN02509 135 RDALESLLAKLDKAD---R-AFCFTSGMAALSAVTH-L-IKNGEEIVAGDD-VYGGSDRLLSQVVPRSGVVVKRVNT--- 204 (464)
T ss_pred HHHHHHHHHHHhCCC---E-EEEeCcHHHHHHHHHH-H-hCCCCEEEEcCC-chhhHHHHHHHHHHHCCeEEEEeCC---
Confidence 466778889998863 2 4445566788877664 3 578999887543 344443 333556778999887753
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCc
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPD 356 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~D 356 (872)
.+.++++++|. ++|++|.+.+.+|.+|.+.|++ +++.||++|+.+++|.|++.|.. ...+ .+++|
T Consensus 205 ---~d~e~l~~ai~--------~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~--~~pl-~~gaD 270 (464)
T PLN02509 205 ---TNLDEVAAAIG--------PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVL--SRPL-ELGAD 270 (464)
T ss_pred ---CCHHHHHHhCC--------cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccccc--CChh-hcCCc
Confidence 24677777664 3689999999999999999998 55788999999999999988752 2222 36899
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeCC
Q 002866 357 FIITSFYRVFGFDPTG--FGCLLIKKS 381 (872)
Q Consensus 357 Flv~S~HK~fG~~PtG--vG~LyVRk~ 381 (872)
++++|++||+++ |.+ .|+++++.+
T Consensus 271 ivv~S~tK~l~G-~gdv~gG~v~~~~~ 296 (464)
T PLN02509 271 IVMHSATKFIAG-HSDVMAGVLAVKGE 296 (464)
T ss_pred EEEecCcccccC-CCccceeEEEeccH
Confidence 999999999987 666 677777654
No 122
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.30 E-value=5.7e-11 Score=136.71 Aligned_cols=172 Identities=13% Similarity=0.122 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEE---eCCHHHHHHHHHhhCCCCCCCeEEEecccC---chhHHHHHHHH--HHcCcE
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVF---TVSRGSAFKLLAESYPFHTNKKLLTMFDYE---SQSVNWMAQSA--KEKGAK 268 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVF---TsnATeALnLVaeslpf~~Gd~ILT~~DhE---HnSVl~~~~~A--krkGae 268 (872)
++.+-++++.+++|++.++. ++| +.+++.|+..+..++ +++||.|+.. +.+ |-+-....... ...+..
T Consensus 80 ~lE~~~~~~~~~~f~~~~~~--~~~nv~~~SG~~AN~av~~aL-~~pgD~Il~~-d~~~gGhl~H~~~~~g~~~s~~~~~ 155 (475)
T PLN03226 80 QIETLCQKRALEAFRLDPEK--WGVNVQPLSGSPANFAVYTAL-LQPHDRIMGL-DLPHGGHLSHGYQTDGKKISATSIY 155 (475)
T ss_pred HHHHHHHHHHHHHhCCCcce--eEEecCcCchHHHHHHHHHHh-CCCCCEEEEC-CCCcCcchhhhhhhcccccccceEE
Confidence 45556899999999998764 444 366777877788777 5799999873 211 11111111110 111222
Q ss_pred EEEEec--cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCC
Q 002866 269 VYSAWF--KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDM 345 (872)
Q Consensus 269 V~~Vpv--d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~m 345 (872)
+..+++ +..++.||.++|++++... +++++++. .+ .+|...|++.+ ..|+++|++++||+||.+|.
T Consensus 156 ~~~~~y~~~~~~g~iD~d~Le~~l~~~-------~pklIv~~-~S-~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gl-- 224 (475)
T PLN03226 156 FESMPYRLDESTGLIDYDKLEKKAMLF-------RPKLIIAG-AS-AYPRDWDYARMRKIADKVGALLMCDMAHISGL-- 224 (475)
T ss_pred EEeeeeeecCCCCCcCHHHHHHHHhhc-------CCeEEEEe-cC-cCCCccCHHHHHHHHHHcCCEEEEEchhhhCc--
Confidence 233333 4446889999999988642 35666553 34 48999999854 57899999999999999986
Q ss_pred ccCCCCC---CCCcEEEEcccccCCCCCCceEEEEEeCCCccc
Q 002866 346 DSLGLSL---FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGS 385 (872)
Q Consensus 346 ipLDLs~---l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~ 385 (872)
+..++.. -.+|++++++||||++ |.| |+++++++..+.
T Consensus 225 i~~~~~~~p~~~~Div~~t~hK~L~G-P~G-g~I~~~~~~~~~ 265 (475)
T PLN03226 225 VAAQEAASPFEYCDVVTTTTHKSLRG-PRG-GMIFFRKGPKPP 265 (475)
T ss_pred ccCCCCCCCCCCCeEEEecCcccccC-CCc-eEEEEchhhccc
Confidence 5555432 2699999999999966 899 888888876544
No 123
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.30 E-value=7.3e-11 Score=129.16 Aligned_cols=207 Identities=11% Similarity=0.129 Sum_probs=143.5
Q ss_pred ceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 150 KVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
.+-||.+-... +|+.+++++.+ .+... ....|.++. ..+.|+.||++++++++ +|++|+|+++|
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~-------~~~~~--~~~~y~~~~----~~~lr~~ia~~~~~~~~--~i~it~G~~~~ 88 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQE-------IVKSS--QVNIYPDPT----AEKLREELARYCSVVPT--NIFVGNGSDEI 88 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHH-------HhhcC--cccCCCCcc----HHHHHHHHHHHhCCCcc--cEEEecCHHHH
Confidence 45677777763 66777776432 11110 111243332 36899999999999876 59999999999
Q ss_pred HHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEe
Q 002866 229 FKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFP 308 (872)
Q Consensus 229 LnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p 308 (872)
+.+++..+ +.+||+|++.. ++...+...++..|+++..++++. ++.++.+++++++.. .+++++.++
T Consensus 89 l~~~~~~l-~~~gd~Vlv~~----p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~~~-------~~~k~v~l~ 155 (351)
T PRK14807 89 IHLIMLAF-INKGDVVIYPH----PSFAMYSVYSKIAGAVEIPVKLKE-DYTYDVGSFIKVIEK-------YQPKLVFLC 155 (351)
T ss_pred HHHHHHHh-cCCCCEEEEeC----CChHHHHHHHHHcCCeEEEeecCC-CCCCCHHHHHHHhhc-------cCCCEEEEe
Confidence 99999987 57899988652 233345556777899999999874 456889999888853 158899999
Q ss_pred CccCcccchhcHHHH-HHHHHCCcEEEeecccc--CCCCCccCC-CCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcc
Q 002866 309 VQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSL--GPKDMDSLG-LSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 309 ~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~--aG~~mipLD-Ls~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~ 384 (872)
..+|.||..+|.+.+ +.+++++..+++|.+.. .+.. ... +....--+++.|+-|.||.+=-.+|.++..+++++
T Consensus 156 ~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~--~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~ 233 (351)
T PRK14807 156 NPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNT--IVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILK 233 (351)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccc--hHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHH
Confidence 999999999999855 45677777899999952 2221 111 12223358889999999831123777776555554
Q ss_pred cc
Q 002866 385 SL 386 (872)
Q Consensus 385 ~L 386 (872)
.+
T Consensus 234 ~~ 235 (351)
T PRK14807 234 YL 235 (351)
T ss_pred HH
Confidence 44
No 124
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.30 E-value=6.9e-11 Score=129.03 Aligned_cols=219 Identities=16% Similarity=0.213 Sum_probs=147.0
Q ss_pred hhHHHHHhhcccCCCCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCC
Q 002866 134 DKIDQLRANEYLHLSPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNI 212 (872)
Q Consensus 134 ~~ID~lR~~EFP~L~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA 212 (872)
..+.++++ +|+.. ..+.|+.+-... .++.+.+++.+ .+ ..+ ..|..+ ...+.|+.||+++++
T Consensus 17 ~~~~~~~~-~~~~~-~~i~l~~n~~~~~~~~~v~~a~~~-------~~-~~~---~~~p~~----g~~~lr~~ia~~~~~ 79 (359)
T PRK03158 17 KSIEEVKR-EYGLE-KIVKLASNENPYGPSPKVKEAIAA-------HL-DEL---ALYPDG----YAPELRTKVAKHLGV 79 (359)
T ss_pred CCHHHHHH-hcCCC-ceEEecCCCCCCCCCHHHHHHHHH-------HH-HHh---hcCCCC----cHHHHHHHHHHHhCC
Confidence 34555654 57644 567775443322 35556666432 11 111 112111 345799999999999
Q ss_pred CCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhh
Q 002866 213 PENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISS 292 (872)
Q Consensus 213 ~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~ 292 (872)
+++ .|+||+|+++++.+++..+ +++|+.|++.. ++...+...+...|+++..+|++ +..++.+++++.+..
T Consensus 80 ~~~--~i~~t~G~~~~l~~~~~~~-~~~gd~v~~~~----p~y~~~~~~~~~~g~~~~~~~~~--~~~~d~~~l~~~~~~ 150 (359)
T PRK03158 80 DEE--QLLFGAGLDEVIQMISRAL-LNPGTNTVMAE----PTFSQYRHNAIIEGAEVREVPLK--DGGHDLEAMLKAIDE 150 (359)
T ss_pred CHH--HEEECCCHHHHHHHHHHHH-hCCCCEEEEcC----CCHHHHHHHHHHcCCeEEEEecC--CCCcCHHHHHHhcCC
Confidence 876 5999999999999999887 47899987652 22333445566789999999986 356788888776642
Q ss_pred hhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHH--CCcEEEeeccccC----CCCCccCC-CCCCCCcEEEEcccc
Q 002866 293 KKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQ--NHWHVLLDAGSLG----PKDMDSLG-LSLFRPDFIITSFYR 364 (872)
Q Consensus 293 ~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are--~G~~VLVDAAQ~a----G~~mipLD-Ls~l~~DFlv~S~HK 364 (872)
+++++.++..+|.||.++|.+. .+.++. +++++++|-+..- +.....+. +...+..+++.|+-|
T Consensus 151 --------~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 222 (359)
T PRK03158 151 --------QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSK 222 (359)
T ss_pred --------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechH
Confidence 5789999999999999999974 444544 5899999999531 11000111 122345688899999
Q ss_pred cCCCCCCce--EEEEEeCCCcccccC
Q 002866 365 VFGFDPTGF--GCLLIKKSVMGSLQN 388 (872)
Q Consensus 365 ~fG~~PtGv--G~LyVRk~~i~~L~P 388 (872)
.||. .|+ |+++..++.++.+..
T Consensus 223 ~~g~--~GlRiG~~v~~~~~~~~~~~ 246 (359)
T PRK03158 223 AYGL--AALRVGYGIASEELIEKLNI 246 (359)
T ss_pred hhcC--cchhhehhcCCHHHHHHHHH
Confidence 9983 475 999988887766654
No 125
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.29 E-value=6.2e-11 Score=128.73 Aligned_cols=205 Identities=12% Similarity=0.122 Sum_probs=139.4
Q ss_pred CCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHH
Q 002866 148 SPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRG 226 (872)
Q Consensus 148 ~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnAT 226 (872)
.+.++|+.+.... +|+.+.+++.+ .+...+ ..|..+. ..+.|+.||++++++++ +|++|+|++
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~-------~~~~~~---~~y~~~~----~~~lr~aia~~~~~~~~--~I~it~G~~ 87 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRA-------ALGDDL---RLYPDPN----ADALRQAIAAYYGLDPE--QVFVGNGSD 87 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHH-------Hhhhhh---hcCCCCc----HHHHHHHHHHHhCCCHH--HEEEcCCHH
Confidence 3578999887765 35666665432 111111 2343332 26899999999999886 499999999
Q ss_pred HHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEE
Q 002866 227 SAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFV 306 (872)
Q Consensus 227 eALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa 306 (872)
+|+.+++..+ +++||+|++..- .+. .+...++..|+++..+|++. ++.++.+++++ .+++++
T Consensus 88 ~al~~~~~~l-~~~gd~vlv~~P-~y~---~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~------------~~~~v~ 149 (353)
T PRK05387 88 EVLAHAFLAF-FNHDRPLLFPDI-TYS---FYPVYAGLYGIPYEEIPLDD-DFSIDVEDYLR------------PNGGII 149 (353)
T ss_pred HHHHHHHHHh-cCCCCEEEEeCC-CHH---HHHHHHHHcCCEEEEeecCC-CCCCCHHHHHh------------cCCEEE
Confidence 9999999988 478999876531 222 23344567899999999864 45678877642 246788
Q ss_pred EeCccCcccchhcHHHH-HHHHHC-CcEEEeeccc--cCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 307 FPVQSRVTGAKYSYQWM-ALAQQN-HWHVLLDAGS--LGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 307 ~p~vSNvTG~i~PLe~I-~~Are~-G~~VLVDAAQ--~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
++.-+|.||.++|.+.+ +.++.. ++++++|-+- +.+....++ +...+..+++.|+.|.||.+--.+|+++..++.
T Consensus 150 ~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~ 228 (353)
T PRK05387 150 FPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPL-IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPEL 228 (353)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHH-HhhCCCEEEEEehhHhhcchhhhceeeecCHHH
Confidence 99999999999999754 445443 9999999873 222110111 122345799999999988311238999887776
Q ss_pred ccccc
Q 002866 383 MGSLQ 387 (872)
Q Consensus 383 i~~L~ 387 (872)
++.+.
T Consensus 229 ~~~l~ 233 (353)
T PRK05387 229 IEALN 233 (353)
T ss_pred HHHHH
Confidence 66554
No 126
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.28 E-value=9.7e-11 Score=128.41 Aligned_cols=195 Identities=8% Similarity=0.077 Sum_probs=131.0
Q ss_pred ceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 150 KVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
.+.|+.+-.. ++|+.+++++.+ .+ .. ...|..+ ...+.|+.||++++++++ +|++|+|++++
T Consensus 22 ~i~l~~~~~~~~~p~~~~~a~~~-------~~-~~---~~~y~~~----~~~~lr~~ia~~~~~~~~--~i~it~Ga~~~ 84 (356)
T PRK08056 22 LLDFSANINPLGMPVSLKRAIID-------NL-DC---AERYPDV----EYRHLHQALARHHQVPAS--WILAGNGETES 84 (356)
T ss_pred EEEeccccCCCCCCHHHHHHHHH-------HH-Hh---cccCcCc----cHHHHHHHHHHHhCcChh--hEEECCCHHHH
Confidence 6788865333 366777776432 11 11 1234322 257899999999999887 49999999999
Q ss_pred HHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCC-ccCHHHHHHHHhhhhccCCCCCceEEEE
Q 002866 229 FKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTL-KLCSTDLRKQISSKKRRKKDSAAGLFVF 307 (872)
Q Consensus 229 LnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g-~Id~edLe~~I~~~~rr~~~~~T~LVa~ 307 (872)
+.+++..+ .+|+.++.. ++...+...++..|+++..+|.+..++ .++ .++.+.+. +++++|.+
T Consensus 85 l~~~~~~l--~~g~viv~~-----P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~--------~~~k~v~l 148 (356)
T PRK08056 85 IFAVVSGL--KPRRAMIVT-----PGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT--------PDLDCLFL 148 (356)
T ss_pred HHHHHHHh--CCCCEEEeC-----CCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc--------CCCCEEEE
Confidence 99999886 466644432 223345566778899999999864322 333 34444442 35889999
Q ss_pred eCccCcccchhcH---H-HHHHHHHCCcEEEeecc--ccCCCC--CccCCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 002866 308 PVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAG--SLGPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 308 p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAA--Q~aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
++.+|.||..+|. + +++.|+++++++++|.+ .+.... .+++ +...+..+++.|++|+||.+=..+|.++.
T Consensus 149 ~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~G~RiG~~v~ 226 (356)
T PRK08056 149 CTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ-LADNPHLWVLRSLTKFYAIPGLRLGYLVN 226 (356)
T ss_pred eCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH-hccCCCEEEEEechhhccCcchhheeeec
Confidence 9999999999994 3 45678899999999998 222110 0121 34456789999999999931233677765
No 127
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.28 E-value=1.8e-10 Score=127.82 Aligned_cols=159 Identities=18% Similarity=0.158 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
...++..+.+++++|++ .+++|+|+|+|+.+++..+.+++|++|++.. ..+.++. ..+...|++++.++++.
T Consensus 31 ~~~~~~e~~la~~~g~~----~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~-~t~~~~~---~~~~~~G~~~v~~d~d~ 102 (375)
T PRK11706 31 GFTRRCQQWLEQRFGSA----KVLLTPSCTAALEMAALLLDIQPGDEVIMPS-YTFVSTA---NAFVLRGAKIVFVDIRP 102 (375)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHhCCCCCCEEEECC-CCcHHHH---HHHHHcCCEEEEEecCC
Confidence 34566777789999883 3999999999999988777678999988763 3344443 34566799999999987
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCC--
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLF-- 353 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l-- 353 (872)
.+..++.+++++++.. +|++|.+. |.+|...+++ +++.|+++|+.++.|++|+.|. ..+-...
T Consensus 103 ~~~~~d~~~le~~i~~--------~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~---~~~~~~~g~ 168 (375)
T PRK11706 103 DTMNIDETLIEAAITP--------KTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMS---TYKGRALGT 168 (375)
T ss_pred CcCCcCHHHHHHhcCC--------CCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECcccccc---ccCCeeeec
Confidence 5567899999988753 47777765 4699999997 5677899999999999998874 2332222
Q ss_pred CCcEEEEccc--ccCCCCCCce-EEEEEeC
Q 002866 354 RPDFIITSFY--RVFGFDPTGF-GCLLIKK 380 (872)
Q Consensus 354 ~~DFlv~S~H--K~fG~~PtGv-G~LyVRk 380 (872)
-.|+-++||| |.++ + |. |++++++
T Consensus 169 ~~~~~~~Sf~~~K~l~--~-g~gG~~~~~~ 195 (375)
T PRK11706 169 IGHIGCFSFHETKNYT--A-GEGGALLIND 195 (375)
T ss_pred CcCEEEEeCCCCcccc--c-cCCeEEEECC
Confidence 2589999999 9886 3 44 4454443
No 128
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.28 E-value=8e-11 Score=133.64 Aligned_cols=164 Identities=12% Similarity=0.066 Sum_probs=120.2
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKV 269 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV 269 (872)
++||. .....++||++.|+.. .++++++++|+.+++.++ +++|++|++....-+.....+...++..|+++
T Consensus 55 ~~~pt----~~~Le~~lA~l~g~~~----~l~~ssG~~Ai~~al~al-~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v 125 (425)
T PRK06084 55 IMNPT----NDVLEQRVAALEGGVG----ALAVASGMAAITYAIQTI-AEAGDNIVSVAKLYGGTYNLLAHTLPRIGIET 125 (425)
T ss_pred CCCch----HHHHHHHHHHHhCCCc----eeEehhHHHHHHHHHHHH-hCCCCEEEEeCCCcchHHHHHHHhcccceeEE
Confidence 45665 3578899999999642 567888889999999887 47899988663311222333333334468887
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccC
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSL 348 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipL 348 (872)
.+++. .+.++++++|.. +|++|.+...+|.||.++|++. ++.|+++|+++++|.+++.|.. .
T Consensus 126 ~~~d~------~d~e~le~ai~~--------~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~---~ 188 (425)
T PRK06084 126 RFAAH------DDIAALEALIDE--------RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVL---C 188 (425)
T ss_pred EEECC------CCHHHHHHHhcc--------CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc---C
Confidence 76653 267888888753 5889999999999999999974 5778999999999999987752 2
Q ss_pred CCCCCCCcEEEEcccccCCCCC-CceEEEEEeC
Q 002866 349 GLSLFRPDFIITSFYRVFGFDP-TGFGCLLIKK 380 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk 380 (872)
+.-.+++|+++.|++|++|+ | ..+|.+++..
T Consensus 189 ~p~~~gaDivv~S~tK~l~G-~g~~~gG~v~~~ 220 (425)
T PRK06084 189 RPFEHGADIVVHSLTKYIGG-HGTSIGGIVVDS 220 (425)
T ss_pred ChhhcCCCEEEECchhcccc-cccceeEEEEeC
Confidence 22256899999999999986 4 2356666643
No 129
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.27 E-value=3.4e-11 Score=133.45 Aligned_cols=168 Identities=15% Similarity=0.167 Sum_probs=123.0
Q ss_pred HHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.||+++ | ++++ .|++|+|+|+|+.+++.++ .++|+.|++.. ..+... ...++..|+++..+|
T Consensus 73 ~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~g~~Vlv~~-p~y~~~---~~~~~~~g~~~~~v~ 145 (391)
T PRK08361 73 PELREAIAEYYKKFYGVDVDVD--NVIVTAGAYEATYLAFESL-LEEGDEVIIPD-PAFVCY---VEDAKIAEAKPIRIP 145 (391)
T ss_pred HHHHHHHHHHHHHHhCCCCCcc--cEEEeCChHHHHHHHHHHh-cCCCCEEEEcC-CCCccc---HHHHHHcCCEEEEEe
Confidence 46888888876 3 5565 5999999999999999887 57899887653 233333 344566899999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeecccc--C--CCC
Q 002866 274 FKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSL--G--PKD 344 (872)
Q Consensus 274 vd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~--a--G~~ 344 (872)
++.. +..++.+++++.+.. +++++.+++.+|.||..+| ++ +++.|+++++++++|.+-. . +..
T Consensus 146 ~~~~~~~~~d~~~l~~~i~~--------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 217 (391)
T PRK08361 146 LREENEFQPDPDELLELITK--------RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAK 217 (391)
T ss_pred cCCccCCCCCHHHHHHhccc--------ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCC
Confidence 8653 345889999887753 4789999999999999999 44 3566899999999998832 1 110
Q ss_pred CccCCCC--CCCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccc
Q 002866 345 MDSLGLS--LFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSL 386 (872)
Q Consensus 345 mipLDLs--~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L 386 (872)
...+. ....++++.|++|.||. .| +|++++.++.+..+
T Consensus 218 --~~~~~~~~~~~~i~~~s~SK~~~~--~GlRiG~~~~~~~~~~~~ 259 (391)
T PRK08361 218 --HYPMIKYAPDNTILANSFSKTFAM--TGWRLGFVIAPEQVIKDM 259 (391)
T ss_pred --CCCHhhcCCCCEEEEecCchhcCC--cHhhhhhhccCHHHHHHH
Confidence 11111 12467899999999994 48 89999877665544
No 130
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.27 E-value=2.8e-10 Score=124.06 Aligned_cols=165 Identities=13% Similarity=0.107 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
...+++|+.++++++++ + .|++ .++++++..+...+ +++|+.|++. +..|.+.... ++..|+++..++.
T Consensus 84 ~~~~~l~~~la~~~~~~-~--~i~~-~~g~~~~~~~l~~~-~~~gd~V~~~-~~~~~~~~~~---~~~~g~~~~~~~~-- 152 (385)
T PRK05958 84 PAHEALEEELAEWFGAE-R--ALLF-SSGYAANLAVLTAL-AGKGDLIVSD-KLNHASLIDG---ARLSRARVRRYPH-- 152 (385)
T ss_pred HHHHHHHHHHHHHhCCC-c--EEEE-CcHHHHHHHHHHHh-CCCCCEEEEe-CccCHHHHHH---HHhcCCceEEeCC--
Confidence 56788999999999952 2 3554 45566655555555 5789998765 3456655433 3446888887753
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCC------Ccc-C
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKD------MDS-L 348 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~------mip-L 348 (872)
.+.+++++++... .+.+.+|++.++.|.+|.+.|++. ++.|+++|+++++|.+|..+.- ... .
T Consensus 153 ----~d~~~l~~~i~~~-----~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~ 223 (385)
T PRK05958 153 ----NDVDALEALLAKW-----RAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEA 223 (385)
T ss_pred ----CCHHHHHHHHHhc-----cCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhh
Confidence 2678888888642 124788889899999999999974 5678999999999999965420 000 1
Q ss_pred CCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcc
Q 002866 349 GLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~ 384 (872)
++.....++++.|++|+|| +.| |+++.+++..+
T Consensus 224 ~~~~~~~~i~~~s~sK~~~--~~G-g~~~~~~~~~~ 256 (385)
T PRK05958 224 GLAGEPDVILVGTLGKALG--SSG-AAVLGSETLID 256 (385)
T ss_pred CCCCCCceEEEEechhhcc--cCC-cEEEcCHHHHH
Confidence 3333445689999999998 556 77766655443
No 131
>PRK03321 putative aminotransferase; Provisional
Probab=99.26 E-value=4.8e-11 Score=129.92 Aligned_cols=207 Identities=13% Similarity=0.130 Sum_probs=142.2
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
+.++|+.+..+. +|+.+++++.+ .. ..+ ..|+.+ -..+.|+.+|+++|++++ +|++|+|+++
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~-------~~-~~~---~~y~~~----g~~~lr~~ia~~~~~~~~--~I~~~~G~~~ 85 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIAR-------AA-AGV---NRYPDM----GAVELRAALAEHLGVPPE--HVAVGCGSVA 85 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHH-------HH-Hhc---CcCCCC----cHHHHHHHHHHHhCcCHH--HEEECCCHHH
Confidence 367888776654 55677776432 11 121 234322 356899999999999876 5999999999
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVF 307 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~ 307 (872)
++.+++..+ +++|++|++.. ++.......++..|+++..+|.+. +..++.+++++.+.. ++++|.+
T Consensus 86 ~l~~~~~~~-~~~gd~Vli~~----p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~~~~--------~~~~v~l 151 (352)
T PRK03321 86 LCQQLVQAT-AGPGDEVIFAW----RSFEAYPILVQVAGATPVQVPLTP-DHTHDLDAMAAAITD--------RTRLIFV 151 (352)
T ss_pred HHHHHHHHh-cCCCCEEEeCC----CCHHHHHHHHHHcCCEEEEccCCC-CCCCCHHHHHHhhcc--------CCCEEEE
Confidence 999998876 57899988652 122222234566899999999874 356788988887742 5789999
Q ss_pred eCccCcccchhcHHH-HHHHHH--CCcEEEeecccc--C--CCCCccCCCCCCCCc-EEEEcccccCCCCCCc--eEEEE
Q 002866 308 PVQSRVTGAKYSYQW-MALAQQ--NHWHVLLDAGSL--G--PKDMDSLGLSLFRPD-FIITSFYRVFGFDPTG--FGCLL 377 (872)
Q Consensus 308 p~vSNvTG~i~PLe~-I~~Are--~G~~VLVDAAQ~--a--G~~mipLDLs~l~~D-Flv~S~HK~fG~~PtG--vG~Ly 377 (872)
++.+|.||.++|++. .+.++. +++++++|.+.. . +....++..-....+ +++.|+=|.||. .| +|+++
T Consensus 152 ~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~--~GlRiG~~v 229 (352)
T PRK03321 152 CNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGL--AGLRVGYAV 229 (352)
T ss_pred eCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhh--HHHhhhhhc
Confidence 999999999999974 455654 589999999842 1 110001111111223 556699999984 36 89999
Q ss_pred EeCCCcccccC
Q 002866 378 IKKSVMGSLQN 388 (872)
Q Consensus 378 VRk~~i~~L~P 388 (872)
..+++++.+..
T Consensus 230 ~~~~~~~~~~~ 240 (352)
T PRK03321 230 GHPEVIAALRK 240 (352)
T ss_pred CCHHHHHHHHH
Confidence 98887777654
No 132
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.26 E-value=7.1e-11 Score=144.04 Aligned_cols=171 Identities=12% Similarity=0.089 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH-H---HHHHHhhCCCCCC----CeEEEe-cccCchhHHHHHHHHHHcC
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS-A---FKLLAESYPFHTN----KKLLTM-FDYESQSVNWMAQSAKEKG 266 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATe-A---LnLVaeslpf~~G----d~ILT~-~DhEHnSVl~~~~~AkrkG 266 (872)
.+++.+..+-|++++|.+. +-+-+|++. | --++++.|.-..| +.++++ ..|.+ .. ..++..|
T Consensus 529 lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgt--nP---asa~~~G 599 (939)
T TIGR00461 529 QELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGT--NP---ASAAMAG 599 (939)
T ss_pred HHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCc--CH---HHHHHCC
Confidence 3788999999999999973 333344443 2 2224444421111 234444 33433 32 2356679
Q ss_pred cEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc-HH-HHHHHHHCCcEEEeeccccCCCC
Q 002866 267 AKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS-YQ-WMALAQQNHWHVLLDAGSLGPKD 344 (872)
Q Consensus 267 aeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P-Le-~I~~Are~G~~VLVDAAQ~aG~~ 344 (872)
++|+.+|++. +|.+|.++|+++|..+ ..+|.+|++++.|| +|.+.| ++ ++++||++|..++||+||.++..
T Consensus 600 ~~Vv~V~~d~-~G~iDle~L~~~i~~~-----~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~ 672 (939)
T TIGR00461 600 MQVVPVNCDQ-DGNIDLVDLKNKAEQH-----GDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQV 672 (939)
T ss_pred CEEEEeccCC-CCCcCHHHHHHHHhhc-----CCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCC
Confidence 9999999974 6899999999999742 24699999999999 799988 97 55788999999999999977652
Q ss_pred CccCCCCCCCCcEEEEcccccCCCC----CCceEEEEEeCCCc
Q 002866 345 MDSLGLSLFRPDFIITSFYRVFGFD----PTGFGCLLIKKSVM 383 (872)
Q Consensus 345 mipLDLs~l~~DFlv~S~HK~fG~~----PtGvG~LyVRk~~i 383 (872)
...+..++++||+++|.||+||.| |.|+|++++|+.+.
T Consensus 673 -~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~ 714 (939)
T TIGR00461 673 -GLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLI 714 (939)
T ss_pred -CCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhch
Confidence 344556899999999999987730 45669999998644
No 133
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.26 E-value=1.9e-10 Score=125.77 Aligned_cols=171 Identities=14% Similarity=0.189 Sum_probs=123.2
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCC
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTL 279 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g 279 (872)
.+.|+.||+++|++++ .|++|+|+++++++++.++ +++|+.|++. ++.+. .+...++..|+++..+|.+ +.
T Consensus 70 ~~lr~~ia~~~~~~~~--~i~~t~G~~~~l~~~~~~l-~~~gd~vl~~-~p~y~---~~~~~~~~~g~~~~~~~~~--~~ 140 (367)
T PRK02731 70 FELKAALAEKFGVDPE--RIILGNGSDEILELLARAY-LGPGDEVIYS-EHGFA---VYPIAAQAVGAKPVEVPAK--DY 140 (367)
T ss_pred HHHHHHHHHHhCcCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEe-cCCHH---HHHHHHHHcCCeEEEeccc--CC
Confidence 5799999999999875 5999999999999999888 5789998876 33332 2233456789999998874 35
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHH--CCcEEEeeccccCCC----CCccCCCCC
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQ--NHWHVLLDAGSLGPK----DMDSLGLSL 352 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are--~G~~VLVDAAQ~aG~----~mipLDLs~ 352 (872)
.++.+++++.+.. ++++|.++..+|.||.++|++.+ +.++. +|+++++|.+..... ....+++-.
T Consensus 141 ~~~~~~l~~~~~~--------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~ 212 (367)
T PRK02731 141 GHDLDAMLAAVTP--------RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVA 212 (367)
T ss_pred CCCHHHHHHHhCC--------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHh
Confidence 6788999887742 57899999999999999999754 44444 489999999953211 001122111
Q ss_pred -CCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 353 -FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 353 -l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
..-.+++.|+-|.||.+...+|+++++++.++.+.
T Consensus 213 ~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~ 248 (367)
T PRK02731 213 KFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALN 248 (367)
T ss_pred hcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHH
Confidence 12346667889998841234699998887766554
No 134
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.26 E-value=1.5e-10 Score=129.17 Aligned_cols=161 Identities=11% Similarity=0.058 Sum_probs=117.1
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCch-hHHHHHHHHHHcCcE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQ-SVNWMAQSAKEKGAK 268 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHn-SVl~~~~~AkrkGae 268 (872)
++||. ....++++|++.|+.. .+ ++++++.|+.++... +++||+|++... .+. ....+.+.+++.|++
T Consensus 47 ~~~p~----~~~Le~~lA~l~g~~~---~~-~~~sG~aai~~~~~~--l~~Gd~Viv~~~-~y~~~~~~~~~~~~~~G~~ 115 (377)
T PRK07671 47 TGNPT----RAALEELIAVLEGGHA---GF-AFGSGMAAITAVMML--FSSGDHVILTDD-VYGGTYRVMTKVLNRFGIE 115 (377)
T ss_pred CCChH----HHHHHHHHHHHhCCCc---eE-EeCCHHHHHHHHHHH--hCCCCEEEECCC-ccchHHHHHHHHHhcCCeE
Confidence 45664 4678999999999853 34 566667788776532 578999886643 233 333445566778999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
++.++. .+.++++++|. ++|++|.+...+|.||.+.|++. .+.|+++|+.+++|.++..+....+
T Consensus 116 v~~v~~------~d~~~l~~ai~--------~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p 181 (377)
T PRK07671 116 HTFVDT------SNLEEVEEAIR--------PNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSP 181 (377)
T ss_pred EEEECC------CCHHHHHHhcC--------CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCCh
Confidence 998763 25778887774 25899999999999999999984 5678999999999999876532123
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc-e-EEEEEe
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG-F-GCLLIK 379 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG-v-G~LyVR 379 (872)
+ .+++|++++|++|++|+ |.+ + |+++++
T Consensus 182 ~---~~g~Divv~S~sK~l~G-~~~~~~G~~v~~ 211 (377)
T PRK07671 182 I---SLGADIVLHSATKYLGG-HSDVVAGLVVVN 211 (377)
T ss_pred h---hhCCeEEEecCcccccC-CccceeEEEEeC
Confidence 3 36899999999999998 664 3 445443
No 135
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.26 E-value=1.8e-10 Score=126.44 Aligned_cols=168 Identities=13% Similarity=0.081 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
....+++++++++++|.+ + .|++|+| ++|+.+++..+ +.+|+.|++.. ..|.++... ++-.|+++..++
T Consensus 77 ~~l~~~l~~~l~~~~g~~-~--~i~~~sG-~~a~~~a~~~~-~~~gd~vi~~~-~~~~~~~~~---~~~~g~~~~~~~-- 145 (385)
T TIGR01825 77 LRLHEELEEKLAKFKKTE-A--ALVFQSG-FNTNQGVLSAL-LRKGDIVLSDE-LNHASIIDG---LRLTKATKKIYK-- 145 (385)
T ss_pred cHHHHHHHHHHHHHhCCC-c--EEEECcH-HHHHHHHHHHh-CCCCCEEEEEc-cccHHHHHH---HHhcCCceEEeC--
Confidence 367788999999999974 2 4888877 56666666665 67899877653 335555432 233577766542
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCC-------cc
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDM-------DS 347 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~m-------ip 347 (872)
.++.+++++.|... ..+++++|+++++.|.||.+.|++. .+.|+++|+++++|.++..+.-. ..
T Consensus 146 ----~~d~~~l~~~l~~~----~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~ 217 (385)
T TIGR01825 146 ----HADMDDLDRVLREN----PSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHH 217 (385)
T ss_pred ----CCCHHHHHHHHHhh----ccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhh
Confidence 35778888877642 2246899999999999999999974 56789999999999998654200 01
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
+++. .++||++.|++|+||. .| |+++.+++.++.+
T Consensus 218 ~~~~-~~~~i~~~s~sK~~~~--~g-G~~~~~~~~~~~~ 252 (385)
T TIGR01825 218 FGLE-DKVDIQVGTLSKAIGV--VG-GYAAGHKELIEYL 252 (385)
T ss_pred cCCC-cCCcEEEEeccHHhhc--CC-CEEecCHHHHHHH
Confidence 3443 5789999999999985 34 6676666555544
No 136
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.25 E-value=5.6e-11 Score=136.78 Aligned_cols=211 Identities=15% Similarity=0.076 Sum_probs=134.7
Q ss_pred CCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc-hHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHh
Q 002866 156 CGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE-KGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAE 234 (872)
Q Consensus 156 AAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps-S~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVae 234 (872)
++-..+++.|++++.- .|.-.|....+. ...|++-. ..++..-+.+++.++||++.. -|=--+++.|...|..
T Consensus 56 asEN~~s~~v~~a~~s--~l~nkyaeg~pg-~ryy~g~~~~d~ie~l~~~ra~~lf~a~~a---nvqp~Sg~~An~~v~~ 129 (493)
T PRK13580 56 ASENYSSLAVQLAMGN--LLTDKYAEGTPG-HRFYAGCQNVDTVEWEAAEHAKELFGAEHA---YVQPHSGADANLVAFW 129 (493)
T ss_pred cccccCCHHHHHHhcc--cccccCcCCCCC-ccccCCCchHHHHHHHHHHHHHHHhCCCcc---cccCCCcHHHHHHHHH
Confidence 5556678888877421 121001000110 11233222 235667799999999999654 2334566677666666
Q ss_pred hCCC----CC--------------------------CCeEEEec-cc-CchhHHHHHHHHHHcCcEEEEEeccCCCCccC
Q 002866 235 SYPF----HT--------------------------NKKLLTMF-DY-ESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLC 282 (872)
Q Consensus 235 slpf----~~--------------------------Gd~ILT~~-Dh-EHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id 282 (872)
++-- .| ||.|+... ++ .|-+.-.... ......++...+++..++.+|
T Consensus 130 all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n-~~~~~~~~~~y~vd~~~g~iD 208 (493)
T PRK13580 130 AILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPN-ISGKMFHQRSYGVDPDTGLLD 208 (493)
T ss_pred HHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccc-hhhheeeeEecccCcccCccC
Confidence 5421 11 67776441 11 1111100001 111224556666776678899
Q ss_pred HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCC------CCCC
Q 002866 283 STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLS------LFRP 355 (872)
Q Consensus 283 ~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs------~l~~ 355 (872)
.+++++++.. .+.+++++++||..+ ..|++. .++|+++|++++||+||.+|. +..++- ..++
T Consensus 209 ~d~l~~~~~~--------~~plvii~g~S~~~~-~~dl~~i~eia~~~gA~L~VD~AH~~Gl--igg~~~~~~~~~~~~~ 277 (493)
T PRK13580 209 YDEIAALARE--------FKPLILVAGYSAYPR-RVNFAKLREIADEVGAVLMVDMAHFAGL--VAGKVFTGDEDPVPHA 277 (493)
T ss_pred HHHHHHHHhh--------cCCEEEEeCccccCC-CcCHHHHHHHHHHcCCEEEEECchhhce--eccccchhhcCCCCCC
Confidence 9999998864 478999999999944 889974 567899999999999999997 555551 1379
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 356 DFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
||+++|+||+|++ |.| |+++++++.++.|
T Consensus 278 D~vtgT~hKaL~G-P~G-G~I~~~~~l~~~L 306 (493)
T PRK13580 278 DIVTTTTHKTLRG-PRG-GLVLAKKEYADAV 306 (493)
T ss_pred cEEEeCChhhccC-CCe-EEEEecHHHHHHH
Confidence 9999999999855 887 9999998877766
No 137
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.24 E-value=8.2e-11 Score=128.90 Aligned_cols=173 Identities=14% Similarity=0.129 Sum_probs=121.4
Q ss_pred HHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.|++++ | ++++ +|++|+|+++|+.+++..+ +++|+.|++.. ..+... ...++..|+++..+|
T Consensus 64 ~~lr~~la~~~~~~~~~~~~~~--~i~~t~g~~~al~~~~~~l-~~~gd~vl~~~-p~y~~~---~~~~~~~g~~~~~v~ 136 (382)
T PRK06108 64 PELREALARYVSRLHGVATPPE--RIAVTSSGVQALMLAAQAL-VGPGDEVVAVT-PLWPNL---VAAPKILGARVVCVP 136 (382)
T ss_pred HHHHHHHHHHHHHHhCCCcCcc--eEEEeCChHHHHHHHHHHh-cCCCCEEEEeC-CCccch---HHHHHHCCCEEEEee
Confidence 35666666654 7 5555 5999999999999999887 47899987652 223323 344567899999999
Q ss_pred ccCC--CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCC----
Q 002866 274 FKWP--TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPK---- 343 (872)
Q Consensus 274 vd~p--~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~---- 343 (872)
.+.. +..++.++|++.+.. ++++++++..+|.||..+|.+ ++..|+++|+++++|.+.....
T Consensus 137 ~~~~~~~~~~d~~~l~~~~~~--------~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~ 208 (382)
T PRK06108 137 LDFGGGGWTLDLDRLLAAITP--------RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPG 208 (382)
T ss_pred CCCCCCCccCCHHHHHHhcCc--------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCC
Confidence 8642 235788888877742 478999999999999999874 3456789999999998843211
Q ss_pred CCcc--CCCCC-CCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 344 DMDS--LGLSL-FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 344 ~mip--LDLs~-l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
...+ +++.. ....+++.|++|.||.+...+|+++++++.++.+.
T Consensus 209 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~ 255 (382)
T PRK06108 209 GRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLE 255 (382)
T ss_pred CCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHH
Confidence 0001 23322 23468899999998842234899998877665553
No 138
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.24 E-value=3.7e-10 Score=125.49 Aligned_cols=225 Identities=13% Similarity=0.120 Sum_probs=147.8
Q ss_pred hCCCCCCchhHHHHHhhcccCC-CCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHH
Q 002866 126 MYPKYQSSDKIDQLRANEYLHL-SPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIK 203 (872)
Q Consensus 126 ~~p~y~~t~~ID~lR~~EFP~L-~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeAR 203 (872)
..+.|.....++...+ ++... ...++|+.+-... .|+.+++++.+ . ..+ ..|..+. ..+.|
T Consensus 30 ~~~~~~~~~~~~~~~~-~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~--------~-~~~---~~Yp~~~----~~~lr 92 (380)
T PLN03026 30 QLAPYQPILPFEVLSA-QLGRKPEDIVKLDANENPYGPPPEVLEALGN--------M-KFP---YVYPDPE----SRRLR 92 (380)
T ss_pred cCCCCCCCCChHHHHH-HhCCCccceEEccCCCCCCCCCHHHHHHHHh--------h-Hhh---ccCCCCC----HHHHH
Confidence 3333433334554443 23222 2478999875443 44556665321 1 111 1354443 35799
Q ss_pred HHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCH
Q 002866 204 TRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCS 283 (872)
Q Consensus 204 erIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~ 283 (872)
++||+++|++++ .|++|+|+++++.++...+ .++|++|++..- ....+...++..|+++..+|.+. +..++.
T Consensus 93 ~~ia~~~~~~~~--~I~~t~Ga~~~i~~~~~~~-~~~gd~Vlv~~P----~y~~y~~~~~~~g~~~~~v~~~~-~~~~d~ 164 (380)
T PLN03026 93 AALAEDSGLESE--NILVGCGADELIDLLMRCV-LDPGDKIIDCPP----TFGMYVFDAAVNGAEVIKVPRTP-DFSLDV 164 (380)
T ss_pred HHHHHHhCcChh--hEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCC----ChHHHHHHHHHcCCEEEEeecCC-CCCcCH
Confidence 999999999876 4999999999999999887 478999876521 22233445667899999998864 456888
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHH-HHHCCcEEEeecccc--CCCCCccC-CCCCCCCcEEE
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMAL-AQQNHWHVLLDAGSL--GPKDMDSL-GLSLFRPDFII 359 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~-Are~G~~VLVDAAQ~--aG~~mipL-DLs~l~~DFlv 359 (872)
++|++++.. .+++++.++..+|.||+.+|.+.+.. ++. .+++++|.+-. .... ..+ .+...+-.+++
T Consensus 165 ~~l~~~~~~-------~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~-~~~vi~DeaY~~~~~~~-~~~~~~~~~~~viv~ 235 (380)
T PLN03026 165 PRIVEAVET-------HKPKLLFLTSPNNPDGSIISDDDLLKILEL-PILVVLDEAYIEFSTQE-SRMKWVKKYDNLIVL 235 (380)
T ss_pred HHHHHHHhc-------cCCcEEEEeCCCCCCCCCCCHHHHHHHHhc-CCEEEEECcchhhcCCc-chHHHHHhCCCEEEE
Confidence 999887732 25889999999999999999986554 443 48999999942 2110 011 12234456899
Q ss_pred EcccccCCCCCCc--eEEEEEeCCCcccc
Q 002866 360 TSFYRVFGFDPTG--FGCLLIKKSVMGSL 386 (872)
Q Consensus 360 ~S~HK~fG~~PtG--vG~LyVRk~~i~~L 386 (872)
.|+-|.|| ..| +|.++..++.++.+
T Consensus 236 ~SfSK~~g--laGlRiGy~~~~~~~i~~l 262 (380)
T PLN03026 236 RTFSKRAG--LAGLRVGYGAFPLSIIEYL 262 (380)
T ss_pred ecchHhhc--CccccceeeecCHHHHHHH
Confidence 99999998 346 67777655554443
No 139
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.23 E-value=2.6e-10 Score=126.91 Aligned_cols=161 Identities=14% Similarity=0.135 Sum_probs=114.5
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.|+||. ..+.+++||++.|+. .++.|+|+++|+.++... +++||+||+....-...+..+.....+.+++
T Consensus 50 R~~~p~----~~~le~~lA~leg~~----~~v~~~sG~aAi~~~l~~--l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~ 119 (364)
T PRK07269 50 RTKNPT----RAKLEETLAAIESAD----YALATSSGMSAIVLAFSV--FPVGSKVVAVRDLYGGSFRWFNQQEKEGRFH 119 (364)
T ss_pred CCCCcc----HHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHH--hCCCCEEEEecCCcCchHHHHHHHHhcCcEE
Confidence 467876 357888999999863 388899999999988853 5789998866432222333333322322443
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+.+ ..+.++++++|.. +|++|.+...+|.||...|++ +++.||++|+.+++|.+.+.+....|
T Consensus 120 ~~~--------~~d~~~l~~~i~~--------~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~p 183 (364)
T PRK07269 120 FTY--------ANTEEELIAAIEE--------DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRP 183 (364)
T ss_pred EEe--------cCCHHHHHHhcCc--------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 332 1367888877753 589999999999999999998 56788999999999999766542123
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc--eEEEEEe
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIK 379 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVR 379 (872)
+ .+++|++++|++|++++ +.. .|+++.+
T Consensus 184 l---~~gaDivv~S~tK~l~g-~~d~~gG~v~~~ 213 (364)
T PRK07269 184 I---ELGADIVLHSATKYLSG-HNDVLAGVVVTN 213 (364)
T ss_pred h---hhCCcEEEecCceeccC-CCcccceEEEeC
Confidence 3 46899999999999986 444 3444443
No 140
>PRK07324 transaminase; Validated
Probab=99.23 E-value=1.2e-10 Score=128.91 Aligned_cols=171 Identities=14% Similarity=0.167 Sum_probs=123.4
Q ss_pred HHHHHHHHHhcC-CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC
Q 002866 200 HDIKTRIMDHLN-IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT 278 (872)
Q Consensus 200 eeARerIA~lLg-A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~ 278 (872)
.+.|+.||++++ ++++ .|++|+|+++|+.+++.++ ..+||+|++.. ++.......++..|++++.+|++..+
T Consensus 65 ~~lr~~ia~~~~~~~~~--~vi~t~G~~~al~~~~~~l-~~~gd~Vl~~~----P~y~~~~~~~~~~g~~v~~v~~~~~~ 137 (373)
T PRK07324 65 PEFKEAVASLYQNVKPE--NILQTNGATGANFLVLYAL-VEPGDHVISVY----PTYQQLYDIPESLGAEVDYWQLKEEN 137 (373)
T ss_pred HHHHHHHHHHhcCCChh--hEEEcCChHHHHHHHHHHh-CCCCCEEEEcC----CCchhHHHHHHHcCCEEEEEeccccc
Confidence 479999999885 6665 5999999999999999988 57899988753 22333445667789999999987533
Q ss_pred -CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeecccc-CCCCCccCCCCC
Q 002866 279 -LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSL-GPKDMDSLGLSL 352 (872)
Q Consensus 279 -g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~-aG~~mipLDLs~ 352 (872)
..++.+++++++. ++++++.+++.+|.||.++| ++ +++.|+++|+++++|.+.. ...+.....+..
T Consensus 138 ~~~~d~~~l~~~~~--------~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~ 209 (373)
T PRK07324 138 GWLPDLDELRRLVR--------PNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIAD 209 (373)
T ss_pred CCCCCHHHHHHhCC--------CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhh
Confidence 3468888877664 25889999999999999999 54 4567899999999999832 111000111111
Q ss_pred -CCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 353 -FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 353 -l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
.+-..++.|+-|.||. .| +|.++..+++++.+.
T Consensus 210 ~~~~~I~~~s~SK~~~~--~G~RiG~i~~~~~li~~~~ 245 (373)
T PRK07324 210 LYEKGISTNSMSKTYSL--PGIRVGWIAANEEVIDILR 245 (373)
T ss_pred ccCCEEEEecchhhcCC--ccceeEEEecCHHHHHHHH
Confidence 1224677899999984 36 698888766665554
No 141
>PLN02242 methionine gamma-lyase
Probab=99.23 E-value=1.1e-10 Score=132.30 Aligned_cols=165 Identities=10% Similarity=0.044 Sum_probs=121.2
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHH-HH-HHHcCcEEEEEeccC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMA-QS-AKEKGAKVYSAWFKW 276 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~-~~-AkrkGaeV~~Vpvd~ 276 (872)
.++.++++|+++|+.. +++|+|+++|+.+++.++ .++||+|++... .+....... .. ++..|++++.++..
T Consensus 78 ~~~LE~~lA~l~g~~~----~l~~~sG~~Ai~~al~al-~~~GD~Vl~~~~-~Y~~~~~~~~~~~~~~~G~~~~~~d~~- 150 (418)
T PLN02242 78 VLNLGRQMAALEGTEA----AYCTASGMSAISSVLLQL-CSSGGHVVASNT-LYGGTHALLAHFLPRKCNITTTFVDIT- 150 (418)
T ss_pred HHHHHHHHHHHhCCCe----EEEEccHHHHHHHHHHHH-hCCCCEEEEcCC-cHHHHHHHHHHhhhhccCceEEEcCCC-
Confidence 5678899999999853 678999999999998887 579999886532 222232221 12 23368888766432
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
+.++++++|.. .+|++|.+...+|.||.+.|++ +++.||++|+++++|.++. +. .++...+++
T Consensus 151 -----d~e~l~~~i~~-------~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~-~~---~~~~~~~g~ 214 (418)
T PLN02242 151 -----DLEAVKKAVVP-------GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFA-PM---VLSPARLGA 214 (418)
T ss_pred -----CHHHHHHhcCc-------CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCC-cc---CCCHHHcCC
Confidence 67888877742 1489999999999999999997 4567899999999999984 32 345455689
Q ss_pred cEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 356 DFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
|+++.|+.|+|++ +.. .|+++.+++.+..+.
T Consensus 215 divv~S~SK~l~g-~g~~~gG~iv~~~~li~~l~ 247 (418)
T PLN02242 215 DVVVHSISKFISG-GADIIAGAVCGPAELVNSMM 247 (418)
T ss_pred cEEEEeCccccCC-CCCceEEEEEcCHHHHHHHH
Confidence 9999999999985 432 477776666655543
No 142
>PRK08912 hypothetical protein; Provisional
Probab=99.22 E-value=1.9e-10 Score=127.14 Aligned_cols=171 Identities=11% Similarity=0.109 Sum_probs=123.0
Q ss_pred HHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec
Q 002866 201 DIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 201 eARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv 274 (872)
+.|+.|++++ | +++++ +|++|+|+++|+.+++..+ .++|+.|++.. ..+. .+...++..|++++.+++
T Consensus 67 ~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G~~~al~~~~~~~-~~~gd~Vlv~~-p~y~---~~~~~~~~~g~~~~~~~~ 140 (387)
T PRK08912 67 ELRQAVAAHYARFQGLDLDPET-EVMVTSGATEALAAALLAL-VEPGDEVVLFQ-PLYD---AYLPLIRRAGGVPRLVRL 140 (387)
T ss_pred HHHHHHHHHHHHHhCCCCCCcc-cEEEeCCcHHHHHHHHHHh-cCCCCEEEEeC-CCch---hhHHHHHHcCCEEEEEec
Confidence 5677777665 4 44441 5999999999999988887 46899887653 2222 334456778999999998
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc----CCCCCc
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL----GPKDMD 346 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~----aG~~mi 346 (872)
+..+..++.+++++.+.. +++++.+++.+|.||+++|.+ +++.|+++++++++|.+.. .+....
T Consensus 141 ~~~~~~~~~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 212 (387)
T PRK08912 141 EPPHWRLPRAALAAAFSP--------RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHI 212 (387)
T ss_pred CcccCcCCHHHHHHHhCc--------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCc
Confidence 754567889999887742 478999999999999999964 3466799999999999852 111001
Q ss_pred c-CCCCC-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 347 S-LGLSL-FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 347 p-LDLs~-l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
+ ..+.. ...++++.|+.|.||. .| +|++++.++.++.+.
T Consensus 213 ~~~~~~~~~~~~i~~~S~SK~~g~--~GlRiG~~~~~~~~~~~l~ 255 (387)
T PRK08912 213 PLMTLPGMRERTVKIGSAGKIFSL--TGWKVGFVCAAPPLLRVLA 255 (387)
T ss_pred ChhhCCCccCceEEEeechhhccC--cCceeEEEecCHHHHHHHH
Confidence 1 11211 2457999999999993 47 899998777665543
No 143
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.22 E-value=2.8e-10 Score=123.03 Aligned_cols=185 Identities=12% Similarity=0.112 Sum_probs=150.2
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKV 269 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV 269 (872)
+-.|+-.++..++++-|-..|.... .+..+|.-++|.|+...+-.+ ..+||++++... - .=-..+...++|.|++|
T Consensus 43 h~sPe~~qIm~~v~egikyVFkT~n-~~tf~isgsGh~g~E~al~N~-lePgd~vLv~~~-G-~wg~ra~D~~~r~ga~V 118 (385)
T KOG2862|consen 43 HMSPEFVQIMDEVLEGIKYVFKTAN-AQTFVISGSGHSGWEAALVNL-LEPGDNVLVVST-G-TWGQRAADCARRYGAEV 118 (385)
T ss_pred cCCHHHHHHHHHHHHHHHHHhccCC-CceEEEecCCcchHHHHHHhh-cCCCCeEEEEEe-c-hHHHHHHHHHHhhCcee
Confidence 3345556888999999999998764 368999999999988777665 358999875421 0 00124567889999999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HH-HHHHHCCcEEEeeccccCCCCCcc
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WM-ALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I-~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
..++.++ +..+..+++.+.|.++ +.++|.++|.-.-||+.+|+. .. .++|+++++++||+++++|. .+
T Consensus 119 ~~v~~~~-G~~~~le~i~~~lsqh-------~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlgg--t~ 188 (385)
T KOG2862|consen 119 DVVEADI-GQAVPLEEITEKLSQH-------KPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGG--TE 188 (385)
T ss_pred eEEecCc-ccCccHHHHHHHHHhc-------CCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCC--cc
Confidence 9999988 4568999999999875 478999999999999999964 44 45699999999999988886 48
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
|-+.++++|+.-....|.+|+ |.|++.+-..+.....++..
T Consensus 189 F~mDewgVDvaytgSQKaL~a-P~GLsiisfS~ka~~~~~~r 229 (385)
T KOG2862|consen 189 FEMDEWGVDVAYTGSQKALGA-PAGLSIISFSDKALEAIRDR 229 (385)
T ss_pred ceehhhcccEEEecchhhcCC-CCCcceeecCHHHHHHHhhc
Confidence 999999999999999999999 99999988888877777654
No 144
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.22 E-value=2e-10 Score=125.39 Aligned_cols=209 Identities=14% Similarity=0.150 Sum_probs=145.9
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
+.++||.+.... .|+.+++++.+ .+... ....|..+. ..+.|+.||+++|.++++ .|++|+|+++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~~~~~-------~~~~~--~~~~Y~~~~----~~~lr~~ia~~~~~~~~~-~I~~t~G~~~ 92 (356)
T PRK04870 27 GMVKLDAMENPYRLPAELRAELGE-------RLAEV--ALNRYPDPR----AAALKAALRAAMGVPAGA-DVLLGNGSDE 92 (356)
T ss_pred CceeCcCCCCCCCCCHHHHHHHHH-------Hhhcc--ccccCCCCC----HHHHHHHHHHHhCcCCCC-cEEEcCCHHH
Confidence 478998886653 56677776432 11111 012343332 367999999999987542 6999999999
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVF 307 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~ 307 (872)
++.+++..+. .+|+.|++.. ++...+...++..|++++.+|++. +..++.++|++.+.. .+++++.+
T Consensus 93 ~i~~~~~~~~-~~gd~vlv~~----P~y~~~~~~~~~~g~~~~~i~~~~-~~~~d~~~l~~~~~~-------~~~~~v~l 159 (356)
T PRK04870 93 LIQLLALACA-KPGATVLAPE----PGFVMYRMSAKLAGLEFVGVPLTA-DFTLDLPAMLAAIAE-------HRPALVFL 159 (356)
T ss_pred HHHHHHHHhc-CCCCEEEECC----CCHHHHHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhhc-------CCCCEEEE
Confidence 9999998773 7899988652 233345666788999999999874 467899999988853 25789999
Q ss_pred eCccCcccchhcHHHHH-HHHHCCcEEEeeccc--cCCCCCccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCC
Q 002866 308 PVQSRVTGAKYSYQWMA-LAQQNHWHVLLDAGS--LGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSV 382 (872)
Q Consensus 308 p~vSNvTG~i~PLe~I~-~Are~G~~VLVDAAQ--~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~ 382 (872)
++-+|.||..+|.+.+. .++..+.++++|.+. +.+....+ .+....--+++.|+.| ||. .| +|+++..++.
T Consensus 160 ~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~vi~~~S~SK-~~~--~GlRiG~~i~~~~~ 235 (356)
T PRK04870 160 AYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLP-RLARFPNLLVMRTVSK-LGL--AGLRLGYLAGHPAW 235 (356)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHH-HHhhCCCEEEEecchh-hhh--HHHhhhhhhCCHHH
Confidence 99999999999997554 344447789999883 22211011 1223334588999999 774 47 9999988877
Q ss_pred cccccC
Q 002866 383 MGSLQN 388 (872)
Q Consensus 383 i~~L~P 388 (872)
++.+..
T Consensus 236 i~~~~~ 241 (356)
T PRK04870 236 IAELDK 241 (356)
T ss_pred HHHHHH
Confidence 766654
No 145
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.21 E-value=2.5e-10 Score=128.29 Aligned_cols=161 Identities=16% Similarity=0.112 Sum_probs=115.2
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.++||.. ++.=++++++.|+. | .+.++++|.|+.+++.++ +++||+||+...+..+....+...+.+.|++
T Consensus 60 r~~~P~~----~~lE~~la~leg~~---~-av~~sSG~aAi~~al~al-l~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~ 130 (384)
T PRK06434 60 RWGNPTV----QAFEEKYAVLENAE---H-ALSFSSGMGAITSAILSL-IKKGKRILSISDLYGQTFYFFNKVLKTLGIH 130 (384)
T ss_pred CCCChhH----HHHHHHHHHHhCCC---c-EEEeCCHHHHHHHHHHHH-hCCCCEEEEecCccchHHHHHHHHHHhcCcE
Confidence 4577753 33445699999984 2 566777789999999887 7899998876543334444455667788999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+.+++++.. +.+. +.. .+++||.+.+.+|.|+.+.|++ +.+.||+++ ++||++++.+....|
T Consensus 131 v~fvd~~~~------~~~~--l~~-------~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~p 193 (384)
T PRK06434 131 VDYIDTDRL------NSLD--FDP-------SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQNP 193 (384)
T ss_pred EEEECCCCh------hhee--ecC-------CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCCc
Confidence 999987531 1121 211 2589999999999999999998 556789988 577999876652224
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc--eEEEEEe
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIK 379 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVR 379 (872)
+ .+++|++++|.||++++ |.+ -|++..+
T Consensus 194 l---~~gaDivv~S~tK~i~G-~~d~~gG~vv~~ 223 (384)
T PRK06434 194 L---DLGADVVIHSATKYISG-HSDVVMGVAGTN 223 (384)
T ss_pred h---hcCCCEEEeecccccCC-CCCceEEEEecC
Confidence 4 36899999999999987 554 3444443
No 146
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.21 E-value=5.2e-10 Score=125.13 Aligned_cols=232 Identities=17% Similarity=0.152 Sum_probs=141.7
Q ss_pred HHHHHhhcccCCCC---ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCC
Q 002866 136 IDQLRANEYLHLSP---KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNI 212 (872)
Q Consensus 136 ID~lR~~EFP~L~~---~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA 212 (872)
++++++.-.|.... .-|+.|-.+++.+..++-.+.. ..+..|+. ..-..|....+..++=+-+++++|.
T Consensus 23 l~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~------~~~n~n~~--~~~~~P~~~~~E~~vi~~l~~l~g~ 94 (373)
T PF00282_consen 23 LKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLA------SALNQNGF--TWEASPAATEIEREVIRWLADLFGL 94 (373)
T ss_dssp HHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHH------HHHT-BTT--STTTSHHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHH------hhhccccc--ccccccccccchHHHHHHHHHHhCC
Confidence 34444433344332 3566666666666665543211 12222221 1112344557778888999999999
Q ss_pred CCC-----CCcEEEeCCHHHHHHHHHhhC-----C------CC-CCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 213 PEN-----EYGLVFTVSRGSAFKLLAESY-----P------FH-TNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 213 ~~d-----EY~VVFTsnATeALnLVaesl-----p------f~-~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
+.. +..=+||+|+|+|+-...... + .. .++.++...+.-|-|+. +.|.-.|+.++.||++
T Consensus 95 ~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~---Kaa~~lGlg~~~I~~~ 171 (373)
T PF00282_consen 95 PESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIE---KAARILGLGVRKIPTD 171 (373)
T ss_dssp SGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHH---HHHHHTTSEEEEE-BB
T ss_pred cccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHH---HhcceeeeEEEEecCC
Confidence 832 235789999999965422111 0 00 12234444454566664 5566689999999999
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCC----CCccCCC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPK----DMDSLGL 350 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~----~mipLDL 350 (872)
. +++++.++|+++|.+... .+...-+|+.++-+..+|++=|++. ...|+++++++|||||-.+.. ..-+++.
T Consensus 172 ~-~~~md~~~L~~~l~~~~~--~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~ 248 (373)
T PF00282_consen 172 E-DGRMDIEALEKALEKDIA--NGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLF 248 (373)
T ss_dssp T-TSSB-HHHHHHHHHHHHH--TTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGT
T ss_pred c-chhhhHHHhhhhhccccc--ccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccccccccccccccc
Confidence 7 689999999999876432 1111237888889999999999985 567899999999999854411 0012222
Q ss_pred CCCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 351 SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
.--++|-+++++|||++. |.++|++++|+..
T Consensus 249 gi~~adSit~d~HK~l~~-P~~~~~~l~r~~~ 279 (373)
T PF00282_consen 249 GIERADSITIDPHKWLGV-PYGCGVLLVRDKS 279 (373)
T ss_dssp TGGGESEEEEETTTTTS--SSS-EEEEESSGG
T ss_pred ccccccccccchhhhhcC-CccceeEEeeccc
Confidence 234689999999999998 9999999999964
No 147
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.20 E-value=1.5e-10 Score=127.68 Aligned_cols=172 Identities=17% Similarity=0.164 Sum_probs=125.0
Q ss_pred HHHHHHHHHHhc------CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHL------NIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lL------gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
....|+.||+++ +++++ .|++|+|+|+|+.+++.++ .++|+.|++. +..|.. +...++..|+++..+
T Consensus 70 ~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~-~p~y~~---~~~~~~~~g~~~~~~ 142 (393)
T PRK05764 70 IPELREAIAAKLKRDNGLDYDPS--QVIVTTGAKQALYNAFMAL-LDPGDEVIIP-APYWVS---YPEMVKLAGGVPVFV 142 (393)
T ss_pred hHHHHHHHHHHHHHHhCCCCCHH--HEEEeCCcHHHHHHHHHHh-cCCCCEEEec-CCCCcc---hHHHHHHcCCEEEEE
Confidence 457888888887 35554 5999999999999998887 5788988765 333443 334456679999999
Q ss_pred eccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC----CC
Q 002866 273 WFKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG----PK 343 (872)
Q Consensus 273 pvd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a----G~ 343 (872)
+.+.. +..++.+++++++.. +++++++++.+|.||.++|.+ +++.|+++|+++++|.+... +.
T Consensus 143 ~~~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 214 (393)
T PRK05764 143 PTGEENGFKLTVEQLEAAITP--------KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA 214 (393)
T ss_pred ecCcccCCcCCHHHHHHhhCc--------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC
Confidence 98732 346788999887742 478999999999999999854 35678999999999987421 11
Q ss_pred C---CccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 344 D---MDSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 344 ~---mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
. ...+.....+.++++.|+-|.||. .| +|+++..++.++.+.
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~s~SK~~~~--~G~RiG~i~~~~~~~~~~~ 261 (393)
T PRK05764 215 EFTSIASLSPELRDRTITVNGFSKAYAM--TGWRLGYAAGPKELIKAMS 261 (393)
T ss_pred CcccHHHcCCCCcCCEEEEecCcccccC--ccceeEEEecCHHHHHHHH
Confidence 0 001112224568899999999984 47 799988777766554
No 148
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.20 E-value=3.5e-10 Score=129.81 Aligned_cols=177 Identities=17% Similarity=0.122 Sum_probs=129.7
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC--C---C---CC----C-eEEEecccCchhHHHHH
Q 002866 193 AEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP--F---H---TN----K-KLLTMFDYESQSVNWMA 259 (872)
Q Consensus 193 psS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp--f---~---~G----d-~ILT~~DhEHnSVl~~~ 259 (872)
|.+..+.+++=.-+++++|++ ++..=+||+|+|+|+.+...... | . .+ . +||++.. -|-| +.
T Consensus 97 p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~-aH~s---~~ 171 (460)
T COG0076 97 PAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSET-AHFS---FE 171 (460)
T ss_pred hhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCc-chhH---HH
Confidence 445567777888899999997 45678999999999775433221 1 1 11 1 4666644 3554 45
Q ss_pred HHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeecc
Q 002866 260 QSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAG 338 (872)
Q Consensus 260 ~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAA 338 (872)
+.+.--|++++.++.+..+.++|.++|+++|.+++- .+.|+-++-...+|.+=||+.| ..|+++++++|||||
T Consensus 172 Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~------~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA 245 (460)
T COG0076 172 KAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTI------GGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAA 245 (460)
T ss_pred HHHHHhCCCceeEEeccCccccCHHHHHHHHHhhcc------CceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEcc
Confidence 667778999999998765689999999999986421 1136667778899999999865 567999999999999
Q ss_pred ccCCCC--C---ccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 339 SLGPKD--M---DSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 339 Q~aG~~--m---ipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
-.+..- + ..+|...-++|-+++++|||+.. |.|+|++++|+.
T Consensus 246 ~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~a-P~~~G~il~rd~ 292 (460)
T COG0076 246 FGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLA-PIGCGVVLFRDE 292 (460)
T ss_pred ccceeecccCccchhhcCCCCceEEEECcccccCC-CCCceEEEEECH
Confidence 433220 0 11244444899999999999887 999999999998
No 149
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.19 E-value=2.1e-10 Score=125.31 Aligned_cols=169 Identities=11% Similarity=0.059 Sum_probs=117.9
Q ss_pred HHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCC---CeEEEecccCchhHHHHHHHHHHcCcEEEE
Q 002866 201 DIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTN---KKLLTMFDYESQSVNWMAQSAKEKGAKVYS 271 (872)
Q Consensus 201 eARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~G---d~ILT~~DhEHnSVl~~~~~AkrkGaeV~~ 271 (872)
..|+.|++++ | ++++ ..|++|+|+++|+.+++..+. .+| |.|++.. . +.......++..|++++.
T Consensus 40 ~lr~aia~~~~~~~g~~~~~~-~~Iiit~Gs~~ai~~~~~~~~-~~g~~~d~Vl~~~-p---~y~~~~~~~~~~g~~~~~ 113 (350)
T TIGR03537 40 ALREAISGWFERRFGVKLDPD-AQVLPSAGSKEAIFHFPLVFI-DPEEDRRRVIFGT-P---GYPVYERGALFAGGEPTA 113 (350)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CcEEEcCChHHHHHHHHHHHc-CCCCCCceEEEcC-C---CCcchHHHHHhcCCEEEE
Confidence 5677777765 6 4443 159999999999999988774 455 5777652 1 222334456778999999
Q ss_pred EeccC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH---H-HHHHHHHCCcEEEeecccc---CCC
Q 002866 272 AWFKW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSL---GPK 343 (872)
Q Consensus 272 Vpvd~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~---aG~ 343 (872)
++++. .+..++.+++++++.. +++++.++.-+|.||..+|. + +++.|+++|+++++|.+.. .+.
T Consensus 114 v~~~~~~~~~~d~~~l~~~~~~--------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~ 185 (350)
T TIGR03537 114 VKLKKEDGFLLRLEKVEKSILE--------ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE 185 (350)
T ss_pred cccCcccCCccCHHHHHHhhhh--------ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC
Confidence 99863 3345799999887753 47899999999999999995 3 4567899999999999963 222
Q ss_pred CCccCCCCCCCC--cEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 344 DMDSLGLSLFRP--DFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 344 ~mipLDLs~l~~--DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
.+..+..... .+++.|+.|.||. .| +|+++..+.+++.+.
T Consensus 186 --~~~~~~~~~~~~~i~~~s~SK~~g~--~GlRiG~~~~~~~~~~~~~ 229 (350)
T TIGR03537 186 --PPHSALEVGIENVLAFHSLSKRSGM--TGYRSGFVAGDEKLISFLR 229 (350)
T ss_pred --CCCchhhcCcCCEEEEeecccccCC--ccccceeeecCHHHHHHHH
Confidence 1222222222 3777799999984 36 787776555554443
No 150
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.19 E-value=2.6e-10 Score=126.70 Aligned_cols=173 Identities=13% Similarity=0.190 Sum_probs=122.9
Q ss_pred HHHHHHHHHhcC----C--CCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHLN----I--PENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lLg----A--~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.|+++++ + +++ .+|++|+|+|+|+++++..+ ..+|+.|++..- .+.. +...++..|+++..++
T Consensus 70 ~~lr~~ia~~~~~~~~~~~~~~-~~i~it~G~~~al~~~~~~~-~~~gd~vl~~~p-~y~~---~~~~~~~~g~~~~~~~ 143 (391)
T PRK07309 70 LELRQAAADFVKEKYNLDYAPE-NEILVTIGATEALSASLTAI-LEPGDKVLLPAP-AYPG---YEPIVNLVGAEIVEID 143 (391)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCC-CCcc---hHHHHHHcCCEEEEEe
Confidence 457777777664 3 222 26999999999999999987 578999876532 2222 3344566899999999
Q ss_pred ccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC----CCCC
Q 002866 274 FKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG----PKDM 345 (872)
Q Consensus 274 vd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a----G~~m 345 (872)
.+..+..++.++|++++... ..+++++.+++.+|.||+.++.+ +++.|+++++++++|.+..- +.
T Consensus 144 ~~~~~~~~d~~~l~~~~~~~-----~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~-- 216 (391)
T PRK07309 144 TTENDFVLTPEMLEKAILEQ-----GDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE-- 216 (391)
T ss_pred cCCcCCcCCHHHHHHHhhcc-----CCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC--
Confidence 86544568899999888642 22578999988899999999864 34567899999999999532 21
Q ss_pred ccCCCCCCCCc--EEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 346 DSLGLSLFRPD--FIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 346 ipLDLs~l~~D--Flv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
...++..+..| +++.|+.|.||. | | +|+++..++.++.+.
T Consensus 217 ~~~~~~~~~~~~~i~~~S~SK~~g~-~-GlRvG~~v~~~~~~~~~~ 260 (391)
T PRK07309 217 PHVSIAEYLPDQTILINGLSKSHAM-T-GWRIGLIFAPAEFTAQLI 260 (391)
T ss_pred CCCCHHHhccCCEEEEecChhhccC-c-cceeEEEEeCHHHHHHHH
Confidence 11222222233 889999999985 2 6 888998877765543
No 151
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.19 E-value=2.9e-10 Score=124.60 Aligned_cols=171 Identities=16% Similarity=0.123 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
...+++++.+++++|++ + .|++|+| ++|+..+..++ +.+||+|++. +..|.+.... ++..|+++..++.
T Consensus 87 ~l~~~l~~~la~~~g~~-~--~i~~tsG-~~a~~~~~~~l-~~~gd~vi~~-~~~~~~~~~~---~~~~~~~~~~~~~-- 155 (397)
T PRK06939 87 DLHKELEEKLAKFLGTE-D--AILYSSC-FDANGGLFETL-LGKEDAIISD-ALNHASIIDG---VRLCKAKRYRYAN-- 155 (397)
T ss_pred HHHHHHHHHHHHHhCCC-c--EEEEcCh-HHHHHHHHHHh-CCCCCEEEEE-hhhhHHHHHH---HHhcCCceEEeCC--
Confidence 56788999999999975 3 4888888 77877777766 6789998876 3345555433 3345777765542
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCc-------cC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMD-------SL 348 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mi-------pL 348 (872)
.+.+++++.+..... ...+++++++.++.|.+|...|++ ++..|+++|+++++|.++..|.... ..
T Consensus 156 ----~d~~~l~~~i~~~~~--~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~ 229 (397)
T PRK06939 156 ----NDMADLEAQLKEAKE--AGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHF 229 (397)
T ss_pred ----CCHHHHHHHHHhhhc--cCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHc
Confidence 367888887764210 112688999999999999999997 5667899999999999986442000 01
Q ss_pred CCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 349 GLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++. -++|++++|++|+|++ +. .|+++.+++.++.+.
T Consensus 230 ~~~-~~~~i~~~S~sK~~~g-~r-~G~v~~~~~~~~~l~ 265 (397)
T PRK06939 230 GVM-DRVDIITGTLGKALGG-AS-GGYTAGRKEVIDWLR 265 (397)
T ss_pred CCC-CCCcEEEEECHHHhCc-cC-ceEEEeCHHHHHHHH
Confidence 221 2579999999999965 65 499988877766654
No 152
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.19 E-value=1.1e-09 Score=121.09 Aligned_cols=201 Identities=12% Similarity=0.093 Sum_probs=131.4
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc-----CCCCCCCcEEEe
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL-----NIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL-----gA~~dEY~VVFT 222 (872)
+.++||.+.... .|+.+.+++.+ .... ...|+.+ .-..+.|+.|++++ +++++ .|++|
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~--------~~~~---~~~Y~~~---~g~~~lr~~ia~~~~~~~~~~~~~--~i~~t 94 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKN--------YDEE---VLAYSHS---QGIPELREAFAKYYKKWGIDVEPD--EILIT 94 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHH--------HhcC---CcCcCCC---CCCHHHHHHHHHHHHHhCCCCCcc--eEEEc
Confidence 478999988763 56666665321 1111 1124332 12457899999987 46665 59999
Q ss_pred CCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCc--cCHHHHHHHHhhhhccCCCC
Q 002866 223 VSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLK--LCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 223 snATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~--Id~edLe~~I~~~~rr~~~~ 300 (872)
+|+|+|+++++..+ +++|++|++...+ +... ...++..|+++..++.+..++. .+.++|++++..
T Consensus 95 ~G~~~al~~~~~~l-~~~gd~Vl~~~p~-y~~~---~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~-------- 161 (397)
T PRK07568 95 NGGSEAILFAMMAI-CDPGDEILVPEPF-YANY---NGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP-------- 161 (397)
T ss_pred CChHHHHHHHHHHh-cCCCCEEEEecCC-CccH---HHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc--------
Confidence 99999999999887 6789998765322 2222 2335667999999998632332 245777776642
Q ss_pred CceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc-C---CCCCc-cCCCCC-CCCcEEEEcccccCCCCC
Q 002866 301 AAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL-G---PKDMD-SLGLSL-FRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~-a---G~~mi-pLDLs~-l~~DFlv~S~HK~fG~~P 370 (872)
++++|.+++.+|.||.++|.+ +++.|+++++++++|.+-. . +.... .+.+.. ..--+++.|+.|.||.+-
T Consensus 162 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G 241 (397)
T PRK07568 162 KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACG 241 (397)
T ss_pred cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCC
Confidence 588999999999999999863 3467799999999999842 1 21000 122221 112277889999988412
Q ss_pred CceEEEEE
Q 002866 371 TGFGCLLI 378 (872)
Q Consensus 371 tGvG~LyV 378 (872)
..+|+++.
T Consensus 242 ~R~G~~~~ 249 (397)
T PRK07568 242 ARIGCLIS 249 (397)
T ss_pred cceEEEec
Confidence 34676665
No 153
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.18 E-value=3e-10 Score=128.10 Aligned_cols=152 Identities=11% Similarity=-0.024 Sum_probs=114.2
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-HHHHHHHcCcE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-MAQSAKEKGAK 268 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~~~~AkrkGae 268 (872)
.+||. .+..+++|+.+=+.. . .++|+++++|++.++.++ +++||+||+... .+..... +.+.+++.|++
T Consensus 61 ~gnPt----~~~Le~~la~le~~~-~---~v~~sSG~aAi~~~l~al-l~~GD~Vlv~~~-~Y~~~~~l~~~~l~~~Gi~ 130 (395)
T PRK05967 61 RGTPT----TDALCKAIDALEGSA-G---TILVPSGLAAVTVPFLGF-LSPGDHALIVDS-VYYPTRHFCDTMLKRLGVE 130 (395)
T ss_pred CCChH----HHHHHHHHHHHhCCC-C---EEEECcHHHHHHHHHHHh-cCCCCEEEEccC-CcHHHHHHHHHHHHhcCeE
Confidence 46664 356778888776643 2 456666899999999887 789999887643 2333332 33567889999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
|.+++.+ +.+.++++|. ++|+||.+...+|.+|.+.||+ +++.||++|+++++|.++..|. .
T Consensus 131 v~~vd~~------~~e~l~~al~--------~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~---~ 193 (395)
T PRK05967 131 VEYYDPE------IGAGIAKLMR--------PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPL---Y 193 (395)
T ss_pred EEEeCCC------CHHHHHHhcC--------cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCce---e
Confidence 9987543 2366777774 3599999999999999999998 5678899999999999988774 2
Q ss_pred CCCCCCCCcEEEEcccccCCC
Q 002866 348 LGLSLFRPDFIITSFYRVFGF 368 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~ 368 (872)
+..-++++|+++-|.-|++++
T Consensus 194 ~~pl~~GaDivv~S~tKy~~G 214 (395)
T PRK05967 194 FRPLDFGVDISIHAATKYPSG 214 (395)
T ss_pred cChhHcCCCEEEEecccccCC
Confidence 344457999999999998663
No 154
>PLN02483 serine palmitoyltransferase
Probab=99.18 E-value=7.3e-10 Score=127.90 Aligned_cols=174 Identities=14% Similarity=0.212 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....+++++||+++|.+ + .|+|++|....+ .++.++ +++||.|++. +..|+++.. .++..|++++.++.+
T Consensus 146 ~~~~ele~~lA~~~g~~-~--ai~~~~G~~an~-~~i~al-~~~Gd~Vi~d-~~~h~s~~~---~~~~~Ga~v~~~~~~- 215 (489)
T PLN02483 146 KLHRELEELVARFVGKP-A--AIVFGMGYATNS-TIIPAL-IGKGGLIISD-SLNHNSIVN---GARGSGATIRVFQHN- 215 (489)
T ss_pred HHHHHHHHHHHHHhCCC-c--EEEECCHHHHHH-HHHHHh-CCCCCEEEEc-chhhHHHHH---HHHHcCCeEEEEeCC-
Confidence 56788999999999963 2 588888744433 445554 6889998865 445776643 456689999988743
Q ss_pred CCCccCHHHHHHHHhhhh----ccCCCCC-ceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCC------
Q 002866 277 PTLKLCSTDLRKQISSKK----RRKKDSA-AGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKD------ 344 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~----rr~~~~~-T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~------ 344 (872)
+.++++++|.... .+...+. +.+|++.++.|++|.+.+++ +++.|+++|+++++|.++..|..
T Consensus 216 -----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g 290 (489)
T PLN02483 216 -----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRG 290 (489)
T ss_pred -----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCc
Confidence 4567776665321 0000112 24888888999999999997 56788999999999999975420
Q ss_pred -CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 345 -MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 345 -mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
...+++...++|+++.|++|.|| +.| |+++.++++++.|+.
T Consensus 291 ~~~~~~v~~~~~dI~~~SfSKs~g--~~G-G~i~~~~~li~~l~~ 332 (489)
T PLN02483 291 VCELLGVDPADVDIMMGTFTKSFG--SCG-GYIAGSKELIQYLKR 332 (489)
T ss_pred hHHhcCCCcccCcEEEEecchhcc--cCc-eEEEcCHHHHHHHHH
Confidence 00134433468999999999999 567 888888887777653
No 155
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.18 E-value=3.9e-10 Score=125.44 Aligned_cols=168 Identities=13% Similarity=0.168 Sum_probs=122.0
Q ss_pred HHHHHHHHHHhcC------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHLN------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lLg------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
+...|+.||++++ ++++ +|++|+|+|+|++++..++ ..+|+.|++..- . ...+...++..|++++.+
T Consensus 75 ~~~lr~~ia~~l~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vli~~p-~---~~~~~~~~~~~g~~v~~v 147 (394)
T PRK06836 75 YPEVREAIAESLNRRFGTPLTAD--HIVMTCGAAGALNVALKAI-LNPGDEVIVFAP-Y---FVEYRFYVDNHGGKLVVV 147 (394)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcC--cEEEeCChHHHHHHHHHHh-cCCCCEEEEcCC-C---CccHHHHHHHcCCEEEEE
Confidence 4578888888885 4555 5999999999999999887 478998876531 2 222344567789999999
Q ss_pred eccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHH------CCcEEEeecccc-C
Q 002866 273 WFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQ------NHWHVLLDAGSL-G 341 (872)
Q Consensus 273 pvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are------~G~~VLVDAAQ~-a 341 (872)
+.+..++.++.+++++++.. ++++|.+++.+|.||..+|.+. ++.|++ +++++++|.+-. .
T Consensus 148 ~~~~~~~~~d~~~l~~~~~~--------~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~ 219 (394)
T PRK06836 148 PTDTDTFQPDLDALEAAITP--------KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREI 219 (394)
T ss_pred ecCCccCcCCHHHHHhhcCc--------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccc
Confidence 99764467899999888843 5889999999999999999853 345677 899999999842 1
Q ss_pred ---CCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 342 ---PKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 342 ---G~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
+.. .+.-++...-.+++.|+-|.||.+--.+|++++.+..
T Consensus 220 ~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~ 262 (394)
T PRK06836 220 VYDGAE-VPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEM 262 (394)
T ss_pred ccCCCC-CCChHHccCcEEEEecchhhccCcceeeEEEecCHHH
Confidence 110 1111223344688999999998422348888866543
No 156
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.16 E-value=2.5e-09 Score=119.85 Aligned_cols=225 Identities=12% Similarity=0.086 Sum_probs=143.7
Q ss_pred HHHHHhhcccCCCCceecccCCCCC--CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc-hHHHHHHHHHHHHHhcCC
Q 002866 136 IDQLRANEYLHLSPKVCLDYCGFGL--FSYIQTLHYWESSTFSLSEITANLSNHALYGGAE-KGTVEHDIKTRIMDHLNI 212 (872)
Q Consensus 136 ID~lR~~EFP~L~~~IYLDyAAtgp--~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps-S~~~ieeARerIA~lLgA 212 (872)
++.+-+. -|...+.++|+++...+ .|+.+.+++.+ .+. .. ....|+.+. ...+.+.+.+.++++.|+
T Consensus 28 ~~~~~~~-~~~~~~~i~l~~g~~~~~~p~~~~~~~~~~-------~~~-~~-~~~~Y~~~~G~~~LR~aia~~l~~~~g~ 97 (405)
T PRK06207 28 LEALLRG-EPLPGRPVDFSHGDVDAHEPTPGAFELFSA-------GVE-RG-GVQAYTEYRGDADIRELLAARLAAFTGA 97 (405)
T ss_pred hhhhhcC-CcCCCCceecCCcCCCCCCCCHHHHHHHHH-------HHh-cC-CCccCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 4444433 46666789999988764 34555554322 111 10 011244322 223444455555555585
Q ss_pred CCCC-CcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC----CCCccCHHHHH
Q 002866 213 PENE-YGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW----PTLKLCSTDLR 287 (872)
Q Consensus 213 ~~dE-Y~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~----p~g~Id~edLe 287 (872)
+.+. ..|++|+|+++|+.+++..+ +.+||.|++..- ........++..|+++..++++. .+..++.++|+
T Consensus 98 ~~~~~~~I~it~Ga~~al~~~~~~l-~~~Gd~Vlv~~P----~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~ 172 (405)
T PRK06207 98 PVDAADELIITPGTQGALFLAVAAT-VARGDKVAIVQP----DYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLE 172 (405)
T ss_pred CCCCCCCEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCC----CchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHH
Confidence 3221 25999999999999999987 478999876521 22233455677899999998752 13457889998
Q ss_pred HHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC----CCCCccCCCCCCCCc---
Q 002866 288 KQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG----PKDMDSLGLSLFRPD--- 356 (872)
Q Consensus 288 ~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a----G~~mipLDLs~l~~D--- 356 (872)
+++.. ++++|.++.-+|.||.++|.+ +++.|+++++++++|-+-.- +.. ...+..+..|
T Consensus 173 ~~~~~--------~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~--~~~~~~~~~~~~~ 242 (405)
T PRK06207 173 EAFKA--------GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTS--YTHLRALPIDPEN 242 (405)
T ss_pred Hhhhh--------cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC--CCchhcCCCCcCc
Confidence 87753 478888888899999999965 34567899999999998321 210 1112212222
Q ss_pred -EEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 357 -FIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 357 -Flv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
+++.|+-|.||. .| +|.++..+++++.+.
T Consensus 243 vi~i~SfSK~~~l--pGlRiG~ii~~~~l~~~~~ 274 (405)
T PRK06207 243 VITIMGPSKTESL--SGYRLGVAFGSPAIIDRME 274 (405)
T ss_pred EEEEecchhhccC--cccceEEEEcCHHHHHHHH
Confidence 789999999984 27 898887766655443
No 157
>PRK09265 aminotransferase AlaT; Validated
Probab=99.15 E-value=3.5e-09 Score=118.15 Aligned_cols=197 Identities=12% Similarity=0.127 Sum_probs=131.3
Q ss_pred CceecccCCCCC----CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc------CCCCCCCc
Q 002866 149 PKVCLDYCGFGL----FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL------NIPENEYG 218 (872)
Q Consensus 149 ~~IYLDyAAtgp----~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL------gA~~dEY~ 218 (872)
+.+.|+.|.-.+ .|+.+++++.+ ... . ...|+.+. -....|+.||+++ +++++ +
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~i~~~~~~-------~~~-~---~~~Y~~~~---G~~~lr~~ia~~~~~~~~~~~~~~--~ 97 (404)
T PRK09265 34 KILKLNIGNPAPFGFEAPDEILRDVIR-------NLP-T---AQGYSDSK---GLFSARKAIMQYYQQKGIPDVDVD--D 97 (404)
T ss_pred CeEEecCCCCCcCCCCCCHHHHHHHHH-------Hhh-c---CCCCCCCC---CcHHHHHHHHHHHhccCCCCCCcc--c
Confidence 478888765532 45566665432 111 1 12354443 2347899999988 77776 4
Q ss_pred EEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHHHhhhhccC
Q 002866 219 LVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQISSKKRRK 297 (872)
Q Consensus 219 VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~I~~~~rr~ 297 (872)
|++|+|+++++.+++..+ +++|++|++. +..|.. +...++..|+++..++.+.. +..++.+++++.+..
T Consensus 98 i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~-~p~y~~---~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~----- 167 (404)
T PRK09265 98 IYIGNGVSELIVMAMQAL-LNNGDEVLVP-APDYPL---WTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP----- 167 (404)
T ss_pred EEEeCChHHHHHHHHHHh-CCCCCEEEEe-CCCCcC---hHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc-----
Confidence 999999999999999887 5789998765 333332 33445567888888887542 345788888877642
Q ss_pred CCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeecccc----CCCCCccCCCCCCCCc---EEEEcccccC
Q 002866 298 KDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSL----GPKDMDSLGLSLFRPD---FIITSFYRVF 366 (872)
Q Consensus 298 ~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~----aG~~mipLDLs~l~~D---Flv~S~HK~f 366 (872)
+++++.+++.+|.||.++| ++ ++..|+++|+++++|-+-. -+.. ...+..+..+ +++.|+-|.|
T Consensus 168 ---~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~~~vi~~~S~SK~~ 242 (404)
T PRK09265 168 ---RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAV--HISIASLAPDLLCVTFNGLSKAY 242 (404)
T ss_pred ---cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCC--cCCHHHcCCCceEEEEecchhhc
Confidence 5889999999999999999 54 4567799999999998732 1210 1112122222 3457778998
Q ss_pred CCCCCc--eEEEEE
Q 002866 367 GFDPTG--FGCLLI 378 (872)
Q Consensus 367 G~~PtG--vG~LyV 378 (872)
|. .| +|+++.
T Consensus 243 ~~--pGlRiG~~v~ 254 (404)
T PRK09265 243 RV--AGFRVGWMVL 254 (404)
T ss_pred cC--cccceEEEEE
Confidence 74 25 687775
No 158
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.15 E-value=1.3e-10 Score=127.43 Aligned_cols=169 Identities=13% Similarity=0.147 Sum_probs=121.2
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCC-CeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTN-KKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT 278 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~G-d~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~ 278 (872)
.+.|++||+++|++++ +|++|+|+++|+.+++.++. .+| ++|++. + +....+...++..|++++.+|++. +
T Consensus 63 ~~Lr~aia~~~~~~~~--~I~it~Gs~~~i~~~~~~~~-~~g~d~vlv~-~---P~y~~y~~~~~~~g~~v~~v~~~~-~ 134 (354)
T PRK04635 63 PELINAYSAYAGVAPE--QILTSRGADEAIELLIRAFC-EPGQDSIACF-G---PTYGMYAISAETFNVGVKALPLTA-D 134 (354)
T ss_pred HHHHHHHHHHhCcCHH--HEEEeCCHHHHHHHHHHHhc-CCCCCeEEEc-C---CChHHHHHHHHHcCCEEEEEecCC-C
Confidence 5789999999999887 49999999999999999884 567 777764 2 223344456778899999999874 3
Q ss_pred CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHH-HHHH-CCcEEEeeccccCCC-CCccCCCCC-CC
Q 002866 279 LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMA-LAQQ-NHWHVLLDAGSLGPK-DMDSLGLSL-FR 354 (872)
Q Consensus 279 g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~-~Are-~G~~VLVDAAQ~aG~-~mipLDLs~-l~ 354 (872)
..++.+.++ .+ ++++++.++..+|.||+++|.+.+. .++. .+++|++|.+..--. .....++.. .+
T Consensus 135 ~~~~~~~l~-~~---------~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~ 204 (354)
T PRK04635 135 YQLPLDYIE-QL---------DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYP 204 (354)
T ss_pred CCCCHHHHH-hc---------cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCC
Confidence 567777765 22 1588999999999999999998554 4443 369999999952110 000111111 11
Q ss_pred CcEEEEcccccCCCCCCc--eEEEEEeCCCcccccC
Q 002866 355 PDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQN 388 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~P 388 (872)
-=+++.|++|+||. .| +|+++++++.++.+..
T Consensus 205 ~~iv~~S~SK~~~l--~GlRlG~~i~~~~~~~~l~~ 238 (354)
T PRK04635 205 NLVVLRTLSKAFAL--AGARCGFTLANEELIEILMR 238 (354)
T ss_pred CEEEEechHHHhhh--hHHHHhhhhCCHHHHHHHHh
Confidence 11478899999983 46 7999998888776653
No 159
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.15 E-value=1.5e-09 Score=120.46 Aligned_cols=162 Identities=12% Similarity=0.094 Sum_probs=117.6
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.|+||. ..+.+++||++.|++. .++++|+++|+.++.. + +.+|++||+....-+.....+...+++.|++
T Consensus 48 r~~~pt----~~~le~~la~l~g~~~----~~~~~sG~~ai~~~~~-l-l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 117 (366)
T PRK08247 48 RTGNPT----RGVLEQAIADLEGGDQ----GFACSSGMAAIQLVMS-L-FRSGDELIVSSDLYGGTYRLFEEHWKKWNVR 117 (366)
T ss_pred CCCCch----HHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHH-H-hCCCCEEEEecCCcCcHHHHHHHHhhccCce
Confidence 467775 4678899999999953 3567777899998764 3 4689998866432122233344556778999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+..++. .+.+++++++.. +|++|.+...+|.+|.+.+++ +++.|+++|+.+++|.+...+....+
T Consensus 118 v~~vd~------~d~~~l~~~i~~--------~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p 183 (366)
T PRK08247 118 FVYVNT------ASLKAIEQAITP--------NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRP 183 (366)
T ss_pred EEEECC------CCHHHHHHhccc--------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCc
Confidence 988764 257788877742 589999989999999999997 56788999999999999765531112
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCc-eEEEEE
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTG-FGCLLI 378 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtG-vG~LyV 378 (872)
+ ..++|+++.|+.|++++ +.+ .|.+++
T Consensus 184 ~---~~g~di~i~S~sK~~~g-~~d~~~G~iv 211 (366)
T PRK08247 184 L---EEGADIVIHSATKYLGG-HNDVLAGLVV 211 (366)
T ss_pred h---hcCCcEEEeecceeccC-CCceeeeEEe
Confidence 2 35899999999999986 544 344333
No 160
>PLN02590 probable tyrosine decarboxylase
Probab=99.14 E-value=3.3e-09 Score=123.99 Aligned_cols=233 Identities=11% Similarity=0.010 Sum_probs=150.6
Q ss_pred hHHHHHhhcccCCCC---ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC
Q 002866 135 KIDQLRANEYLHLSP---KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN 211 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~---~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg 211 (872)
.++.+++.-.|.... .-|+.|--+++.+..++-.+.- +.+..+. ......|....+...+-+-+++++|
T Consensus 113 il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~------sa~n~~~--~~~~~sPa~t~lE~~vi~wl~~l~g 184 (539)
T PLN02590 113 LLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLN------AGLSVVG--FTWLTSPAATELEIIVLDWLAKLLQ 184 (539)
T ss_pred HHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHH------Hhccccc--CCcccCchhHHHHHHHHHHHHHHhC
Confidence 455555543454432 4577776666666666543211 1111111 1122456666788889999999999
Q ss_pred CCCC-----CCcEEEeCCHHHHHHHH---HhhCCCC----CC--CeEEEecccCchhHHHHHHHHHHcCc---EEEEEec
Q 002866 212 IPEN-----EYGLVFTVSRGSAFKLL---AESYPFH----TN--KKLLTMFDYESQSVNWMAQSAKEKGA---KVYSAWF 274 (872)
Q Consensus 212 A~~d-----EY~VVFTsnATeALnLV---aeslpf~----~G--d~ILT~~DhEHnSVl~~~~~AkrkGa---eV~~Vpv 274 (872)
.++. ...=+||+++|+|+-+. |+..-.+ .+ +-++...+.-|.|+. +.|.-.|+ .|+.||+
T Consensus 185 lp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~---KAa~ilGlg~~~vr~Vp~ 261 (539)
T PLN02590 185 LPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFR---KACLIGGIHEENIRLLKT 261 (539)
T ss_pred CCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHH---HHHHHcCCCcccEEEEeC
Confidence 9753 12478999999986442 2211011 11 224444565677664 34444566 5889999
Q ss_pred cC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCcc----C
Q 002866 275 KW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMDS----L 348 (872)
Q Consensus 275 d~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mip----L 348 (872)
+. ++++++.++|+++|...++ ..-..-+|+-++-+-.||.+=||+.| ..|+++|+++|||||-.+..-..+ +
T Consensus 262 d~~~~~~md~~~L~~~I~~d~~--~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~ 339 (539)
T PLN02590 262 DSSTNYGMPPESLEEAISHDLA--KGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKF 339 (539)
T ss_pred CCCCCCcCCHHHHHHHHHHHHh--cCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHH
Confidence 85 3578999999999976432 22245678888888899999999855 577999999999988443320000 1
Q ss_pred CCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 349 GLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
.-.--.+|-+++++|||++. |.++|+|++|+.
T Consensus 340 ~~Gie~ADSit~D~HK~l~~-p~~cg~llvr~~ 371 (539)
T PLN02590 340 IDGIENADSFNMNAHKWLFA-NQTCSPLWVKDR 371 (539)
T ss_pred hcCCccCCEEEECchhhcCc-CcCEEEEEecCH
Confidence 11113589999999999988 999999999985
No 161
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.14 E-value=6.6e-10 Score=125.56 Aligned_cols=165 Identities=11% Similarity=0.050 Sum_probs=111.5
Q ss_pred HHHHH-HHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH--HHHHHHHcCcEE--EE
Q 002866 197 TVEHD-IKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW--MAQSAKEKGAKV--YS 271 (872)
Q Consensus 197 ~~iee-ARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~--~~~~AkrkGaeV--~~ 271 (872)
..+|+ +++++++++|+. +.+++++++|.|+..++.++ .++||+|++.. ..|.++.. .+ ....+..+ ..
T Consensus 73 ~~lE~~~~~~la~l~g~~---~alv~~~SG~~A~~~~l~al-~~~GD~Vl~~~-~~~~~~~~~g~~--~~~~~~~~~~~~ 145 (416)
T PRK13034 73 DEVEALAIERAKQLFGCD---YANVQPHSGSQANGAVYLAL-LKPGDTILGMS-LSHGGHLTHGAK--VSLSGKWYNAVQ 145 (416)
T ss_pred HHHHHHHHHHHHHHhCCC---ceEEecCCcHHHHHHHHHHh-cCCCCEEEEcC-ccceeeeecCCc--ceeccceeeeEE
Confidence 45555 899999999985 45788899999999999888 68999988763 24444211 00 00011222 23
Q ss_pred EeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCC
Q 002866 272 AWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGL 350 (872)
Q Consensus 272 Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDL 350 (872)
.+++..++.++++++++++... ++++|.+.. ..+|...|+.. .+.|+++|+.+++|+||++|. ...+.
T Consensus 146 ~~~~~~~~~~d~~~le~~l~~~-------~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~--~~~g~ 214 (416)
T PRK13034 146 YGVDRLTGLIDYDEVEELAKEH-------KPKLIIAGF--SAYPRELDFARFREIADEVGALLMVDMAHIAGL--VAAGE 214 (416)
T ss_pred cccccccCCcCHHHHHHHHhhc-------CCeEEEECC--CccccccCHHHHHHHHHHcCCEEEEeCcccccC--cccCC
Confidence 3333334568999999888531 367887643 34788889975 457899999999999998774 22222
Q ss_pred C---CCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 351 S---LFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 351 s---~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
. .-.+|++++|+||++++ |.| |+++.+++
T Consensus 215 ~~~~~~~~Di~~~s~~K~l~g-~~G-G~v~~~~~ 246 (416)
T PRK13034 215 HPNPFPHAHVVTTTTHKTLRG-PRG-GMILTNDE 246 (416)
T ss_pred CCCCCCCceEEEEeCcccCCC-CCC-eEEEECcH
Confidence 1 12589999999999966 777 55555443
No 162
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.14 E-value=1.2e-09 Score=120.72 Aligned_cols=161 Identities=14% Similarity=0.050 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+++--+++++++|+. .++.|+|+|.||.++..++.+++|++|+++.-.. .++. ......|+++++++++.
T Consensus 25 ~~~~~fE~~~a~~~g~~----~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~-~~~~---~ai~~~G~~pv~~Di~~ 96 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGVK----YAVAVSSGTSALHLALRALGLGPGDEVIVPAYTF-PATA---SAILWAGAEPVFVDIDP 96 (363)
T ss_dssp HHHHHHHHHHHHHHTSS----EEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS--THHH---HHHHHTT-EEEEE-BET
T ss_pred HHHHHHHHHHHHHhCCC----eEEEeCChhHHHHHHHHhcCCCcCceEecCCCcc-hHHH---HHHHHhccEEEEEeccC
Confidence 46677888999999974 3889999999999999999999999988763222 2232 33445799999999997
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCC--C
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSL--F 353 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~--l 353 (872)
.++.+++++++++|.. +|+.|.+.|. -|...+++. .+.|+++|+.|+-||||+.|. .++=.. .
T Consensus 97 ~~~~id~~~~~~~i~~--------~t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~---~~~g~~~G~ 162 (363)
T PF01041_consen 97 ETLNIDPEALEKAITP--------KTKAILVVHL---FGNPADMDAIRAIARKHGIPLIEDAAQAFGA---RYKGRPVGS 162 (363)
T ss_dssp TTSSB-HHHHHHHHHT--------TEEEEEEE-G---GGB---HHHHHHHHHHTT-EEEEE-TTTTT----EETTEETTS
T ss_pred CcCCcCHHHHHHHhcc--------CccEEEEecC---CCCcccHHHHHHHHHHcCCcEEEccccccCc---eeCCEeccC
Confidence 7899999999999975 4788888774 788889985 567899999999999999985 222111 1
Q ss_pred CCcEEEEccc--ccCCCCCCceEEEEEeCC
Q 002866 354 RPDFIITSFY--RVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 354 ~~DFlv~S~H--K~fG~~PtGvG~LyVRk~ 381 (872)
--|+.+|||| |.+.. . .-|+++.+.+
T Consensus 163 ~gd~~~fSf~~~K~i~~-g-eGG~v~~~~~ 190 (363)
T PF01041_consen 163 FGDIAIFSFHPTKIITT-G-EGGAVVTNDP 190 (363)
T ss_dssp SSSEEEEESSTTSSS-S-S-S-EEEEESTH
T ss_pred CCCceEecCCCCCCCcC-C-CCeeEEecHH
Confidence 2499999998 76643 1 2355655553
No 163
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.13 E-value=6.1e-10 Score=122.87 Aligned_cols=169 Identities=11% Similarity=0.092 Sum_probs=120.0
Q ss_pred HHHHHHHHHhc----CC--CCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHL----NI--PENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lL----gA--~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.||+++ |. ++++ .|++|+|+++|+.+++..+ .++||.|++..- .+. +....++..|+++..+|
T Consensus 70 ~~lr~~ia~~~~~~~~~~~~~~~-~vi~t~G~~~~l~~~~~~~-~~~gd~vlv~~P-~y~---~~~~~~~~~G~~v~~v~ 143 (383)
T TIGR03540 70 LAYRQAVADWYKRRFGVELDPET-EVLSLIGSKEGIAHIPLAF-VNPGDIVLVPDP-GYP---VYRIGTLFAGGEPYEMP 143 (383)
T ss_pred HHHHHHHHHHHHHhhCCCCCCCC-eEEECCCcHHHHHHHHHHh-CCCCCEEEEeCC-CCc---chHHHHHhcCCEEEEEe
Confidence 46778888776 33 3331 4999999999999999987 478999876531 122 23344567899999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc----CCCC
Q 002866 274 FKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL----GPKD 344 (872)
Q Consensus 274 vd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~----aG~~ 344 (872)
.+.. +..++.+++++.+.. ++++|.++..+|.||..+|.+ +++.|+++++++++|-+.. .++.
T Consensus 144 ~~~~~g~~~d~~~l~~~~~~--------~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~ 215 (383)
T TIGR03540 144 LKEENGFLPDFDAIPEDIAK--------KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYK 215 (383)
T ss_pred cCcccCCccCHHHHHhhccc--------cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCC
Confidence 8643 345688888777642 478999888899999999963 4567899999999999964 2221
Q ss_pred CccCCCCC----CCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccc
Q 002866 345 MDSLGLSL----FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSL 386 (872)
Q Consensus 345 mipLDLs~----l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L 386 (872)
+..+.. ....+++.|+=|.|| ..| +|+++..+++++.+
T Consensus 216 --~~~~~~~~~~~~~~i~~~SfSK~~g--~~GlRiG~~i~~~~l~~~~ 259 (383)
T TIGR03540 216 --APSFLEVDGAKDVGIEFHSLSKTYN--MTGWRIGMAVGNADLIAGL 259 (383)
T ss_pred --CcCcccCCCcccCEEEEEecccccC--CccceeeEEeCCHHHHHHH
Confidence 222221 134577788889998 448 99998776665544
No 164
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.13 E-value=6.1e-10 Score=123.95 Aligned_cols=171 Identities=12% Similarity=0.151 Sum_probs=122.7
Q ss_pred HHHHHHHHHHhcC------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHLN------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lLg------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
..+.|+.||++++ ++++ ..|++|+|+++|+.+++..+ .++||.|++.. ++.......++..|+++..+
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~-~~I~it~G~~~al~~~~~~~-~~~Gd~Vlv~~----P~y~~~~~~~~~~G~~~~~v 144 (399)
T PRK07681 71 IQEFHEAVTEYYNNTHNVILNAD-KEVLLLMGSQDGLVHLPMVY-ANPGDIILVPD----PGYTAYETGIQMAGATSYYM 144 (399)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCC-CeEEECCCcHHHHHHHHHHh-CCCCCEEEECC----CCccchHHHHHhcCCEEEEE
Confidence 3468889998885 4552 25999999999999999887 47899987652 12223344567789999999
Q ss_pred eccCCC-CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc----CCC
Q 002866 273 WFKWPT-LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL----GPK 343 (872)
Q Consensus 273 pvd~p~-g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~----aG~ 343 (872)
|++..+ ..++.+++++.+.. ++++|.++.-+|.||.++|.+ +++.|+++++++++|-+.. -+.
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~--------~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~ 216 (399)
T PRK07681 145 PLKKENDFLPDLELIPEEIAD--------KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGN 216 (399)
T ss_pred ecCCCCCCcCCHHHHHHhccc--------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCC
Confidence 987432 35688888777642 478999988899999999964 3466789999999999953 121
Q ss_pred CCccCCCC----CCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 344 DMDSLGLS----LFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 344 ~mipLDLs----~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
....+. .....+++.|+.|.||. .| +|.++..+++++.+.
T Consensus 217 --~~~~~~~~~~~~~~~i~~~S~SK~~~~--~GlRiG~~i~~~~l~~~~~ 262 (399)
T PRK07681 217 --KPISFLSVPGAKEVGVEINSLSKSYSL--AGSRIGYMIGNEEIVRALT 262 (399)
T ss_pred --CCCChhhCCCCcccEEEEeecccccCC--ccceeEEEecCHHHHHHHH
Confidence 111211 12345788899999984 47 899987776655443
No 165
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.13 E-value=2.8e-10 Score=123.69 Aligned_cols=162 Identities=13% Similarity=0.178 Sum_probs=116.1
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCC
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTL 279 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g 279 (872)
.+.|+.|++++|++++ .|++|+|+++++.+++..+ .+| .|++. +..+.. +...++..|+++..++
T Consensus 50 ~~lr~~la~~~~~~~~--~i~~t~G~~~~i~~~~~~l--~~g-~vl~~-~p~y~~---~~~~~~~~g~~~~~~~------ 114 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA--SVLPVNGAQEAIYLLPRLL--APG-RVLVL-APTYSE---YARAWRAAGHEVVELP------ 114 (330)
T ss_pred HHHHHHHHHHhCCChh--hEEECCCHHHHHHHHHHHh--CCC-eEEEe-CCCcHH---HHHHHHHcCCEEEEeC------
Confidence 6899999999999866 4999999999999988775 466 55554 222232 3345677899988765
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecccc--CCCCCccCCC-CC
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSL--GPKDMDSLGL-SL 352 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~--aG~~mipLDL-s~ 352 (872)
+.+++++.+. +++++.++..+|.||.++|.+. ++.|+++|+++++|.+.. .+.. ...++ ..
T Consensus 115 --d~~~l~~~~~---------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~ 182 (330)
T TIGR01140 115 --DLDRLPAALE---------ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA-SLAPQAAR 182 (330)
T ss_pred --CHHHHHhhcc---------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc-chhhHhcc
Confidence 5677776662 3668888899999999999753 356688999999999963 3210 01111 12
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 353 FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
.+.++++.|++|+||.+-..+|+++++++.+..+.+
T Consensus 183 ~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~ 218 (330)
T TIGR01140 183 FPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLRE 218 (330)
T ss_pred CCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHh
Confidence 345699999999999411336999998887766653
No 166
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.12 E-value=1.3e-09 Score=119.12 Aligned_cols=204 Identities=13% Similarity=0.144 Sum_probs=137.5
Q ss_pred ceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 150 KVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
.++||++... +.|+.+++++.+ .+... ....|..+ -..+.|++||+++|++++ .|++|+|++++
T Consensus 20 ~i~l~~~~~~~~~~~~~~~~~~~-------~~~~~--~~~~Y~~~----g~~~lr~~ia~~~~~~~~--~I~~t~G~~~~ 84 (337)
T PRK03967 20 RIWLDKNENPFDLPEELKEEIFE-------ELKRV--PFNRYPHI----TSDPLREAIAEFYGLDAE--NIAVGNGSDEL 84 (337)
T ss_pred eEEecCCCCCCCCCHHHHHHHHH-------HhhcC--ccccCCCC----CHHHHHHHHHHHhCcCcc--eEEEcCCHHHH
Confidence 6899999877 456777766432 12111 01124322 245799999999999886 59999999999
Q ss_pred HHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEe
Q 002866 229 FKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFP 308 (872)
Q Consensus 229 LnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p 308 (872)
++++...+ +|++|++.. ..+. .+...++..|+++..++.+. +..++.+.+++.+. +++++.++
T Consensus 85 l~~~~~~~---~gd~V~v~~-P~y~---~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~~---------~~~~v~~~ 147 (337)
T PRK03967 85 ISYLVKLF---EGKHIVITP-PTFG---MYSFYAKLNGIPVIDVPLKE-DFTIDGERIAEKAK---------NASAVFIC 147 (337)
T ss_pred HHHHHHHh---CCCeEEEeC-CChH---HHHHHHHHcCCeEEEeecCC-CCCcCHHHHHHhcc---------CCCEEEEe
Confidence 99998876 588887652 1222 33445677899999999875 35678888876431 47788899
Q ss_pred CccCcccchhcHHHHHHHHHCCcEEEeecccc--CCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 309 VQSRVTGAKYSYQWMALAQQNHWHVLLDAGSL--GPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 309 ~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~--aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
.-+|.||..+|.+.+..+-++++++++|.+-. .+..+.++ +....-=+++.|+=|.||.+=.-+|++++.++.++.+
T Consensus 148 ~P~NPtG~~~~~~~l~~i~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~ 226 (337)
T PRK03967 148 SPNNPTGNLQPEEEILKVLETGKPVVLDEAYAEFSGKSLIGL-IDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDAL 226 (337)
T ss_pred CCCCCCCCCCCHHHHHHHHhcCCEEEEECchhhhcccchHHH-HhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHH
Confidence 99999999999986554335799999999842 22211111 1111123677999999984113389998766655544
No 167
>PRK08363 alanine aminotransferase; Validated
Probab=99.12 E-value=8e-10 Score=122.84 Aligned_cols=164 Identities=15% Similarity=0.107 Sum_probs=114.3
Q ss_pred HHHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
..+.|+.|++++ | ++++ +|++|+|+|+|+.++...+ .++||.|++..- .+. .....++..|+++..+
T Consensus 72 ~~~lr~~ia~~~~~~~g~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~Vl~~~p-~y~---~~~~~~~~~g~~~v~~ 144 (398)
T PRK08363 72 LPELREAIVKREKRKNGVDITPD--DVRVTAAVTEALQLIFGAL-LDPGDEILIPGP-SYP---PYTGLVKFYGGVPVEY 144 (398)
T ss_pred cHHHHHHHHHHHHHhcCCCCChh--hEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCC-CCc---chHHHHHHcCCEEEEe
Confidence 357888888887 3 4554 6999999999999999988 688999887632 222 2334556678887777
Q ss_pred -eccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH---H-HHHHHHHCCcEEEeeccccC----CC
Q 002866 273 -WFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSLG----PK 343 (872)
Q Consensus 273 -pvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~a----G~ 343 (872)
+.+..+..++.+++++.+.. +++++.+++.+|.||..+|. + +++.|+++|+++++|.+-.. +.
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~ 216 (398)
T PRK08363 145 RTIEEEGWQPDIDDIRKKITE--------KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK 216 (398)
T ss_pred ccccccCCcCCHHHHHhhCCc--------ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc
Confidence 45443445788888776642 47899999999999999994 4 35677899999999998421 11
Q ss_pred CCcc-CCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 002866 344 DMDS-LGLSLFRPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 344 ~mip-LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
. .+ ..+....-=.++.|+.|+|+.+.-++|++++
T Consensus 217 ~-~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~ 251 (398)
T PRK08363 217 H-VSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYF 251 (398)
T ss_pred c-cCHHHcCcCCcEEEEecchhccCCccceEEEEEE
Confidence 0 01 1111111125578999998753456899987
No 168
>PRK12414 putative aminotransferase; Provisional
Probab=99.12 E-value=3.3e-09 Score=117.74 Aligned_cols=212 Identities=10% Similarity=0.113 Sum_probs=141.0
Q ss_pred CceecccCCCCCC-cHHHHHHhhhcccccHHHHHHhhccCcCcCCCc-hHHHHHHHHHHHHHhcCCCCCC-CcEEEeCCH
Q 002866 149 PKVCLDYCGFGLF-SYIQTLHYWESSTFSLSEITANLSNHALYGGAE-KGTVEHDIKTRIMDHLNIPENE-YGLVFTVSR 225 (872)
Q Consensus 149 ~~IYLDyAAtgp~-p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps-S~~~ieeARerIA~lLgA~~dE-Y~VVFTsnA 225 (872)
+.+.|+.+.-... ++...+++.+ .... ....|+.+. ...+.+.+++.+++++|++.+. .+|++|+|+
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~--------~~~~--~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~ 99 (384)
T PRK12414 30 DALNLSQGAPNFAPDPALVEGVAR--------AMRD--GHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASA 99 (384)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHH--------HHHh--CCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECCh
Confidence 4678887665543 4555554321 1111 112354332 2356667777777778875211 259999999
Q ss_pred HHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEE
Q 002866 226 GSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLF 305 (872)
Q Consensus 226 TeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LV 305 (872)
++|+.+++.++ +.+||+|++. +..+.... ..++..|+++..+|++..+..++.++|++++.. ++++|
T Consensus 100 ~~al~~~~~~l-~~~gd~Vlv~-~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~--------~~~~v 166 (384)
T PRK12414 100 SEGLYAAISAL-VHPGDEVIYF-EPSFDSYA---PIVRLQGATPVAIKLSPEDFRVNWDEVAAAITP--------RTRMI 166 (384)
T ss_pred HHHHHHHHHHh-cCCCCEEEEe-CCCccchH---HHHHHcCCEEEEEecCccccccCHHHHHhhcCc--------ccEEE
Confidence 99999999988 5789998765 32333332 334557999999998765567889999887742 58899
Q ss_pred EEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc----CCCCCccCCCCCC----CCcEEEEcccccCCCCCCc-
Q 002866 306 VFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL----GPKDMDSLGLSLF----RPDFIITSFYRVFGFDPTG- 372 (872)
Q Consensus 306 a~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~----aG~~mipLDLs~l----~~DFlv~S~HK~fG~~PtG- 372 (872)
.++..+|.||.+++.+ +++.|+++++++++|.+-. -+.. ...+..+ +--+++.|+-|.||. .|
T Consensus 167 ~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~--~~~~~~~~~~~~~~i~~~SfSK~~~~--pGl 242 (384)
T PRK12414 167 IVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGAR--HHSMARHRELAERSVIVSSFGKSYHV--TGW 242 (384)
T ss_pred EEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCC--ccCcccCcCccCcEEEEecccccccC--ccc
Confidence 9999999999998754 3466789999999999942 1211 1112211 123899999999984 36
Q ss_pred -eEEEEEeCCCccccc
Q 002866 373 -FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 -vG~LyVRk~~i~~L~ 387 (872)
+|++++.+++++.+.
T Consensus 243 RiG~~v~~~~l~~~l~ 258 (384)
T PRK12414 243 RVGYCLAPAELMDEIR 258 (384)
T ss_pred eEEEEecCHHHHHHHH
Confidence 698988777665553
No 169
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.11 E-value=2.5e-08 Score=107.96 Aligned_cols=220 Identities=17% Similarity=0.131 Sum_probs=149.2
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCC-----CchHHHHHHHHHHHHHhcCCCCCCCcEEEeCC
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGG-----AEKGTVEHDIKTRIMDHLNIPENEYGLVFTVS 224 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygN-----psS~~~ieeARerIA~lLgA~~dEY~VVFTsn 224 (872)
.|||=-++-+++|+.+...+.+. +..... -..+|. |.. ..-+.+-.-++.++||..+| |+.-.+
T Consensus 68 ~iYlcGNSLGLmPK~t~~~~~~e----LDkWak----~av~gH~~GkvPW~-~~De~il~l~~~iVGA~e~E--vavmNs 136 (465)
T KOG3846|consen 68 VIYLCGNSLGLMPKSTRNSINAE----LDKWAK----CAVEGHFKGKVPWV-SIDEPILPLLAPIVGAQENE--VAVMNS 136 (465)
T ss_pred eEEEeccccccCchhhHhHHHHH----HHHHHh----hhhhccccccccee-ecchhhhhhhhhhccCCchh--hhhHhh
Confidence 79999999999998876543211 111111 011221 221 23345667789999998876 888888
Q ss_pred HHHHHHHHHhhCCCCC---CCeEEEec-ccCchhHHHHHHHHHHcCcEE----EEEeccCCCCccCHHHHHHHHhhhhcc
Q 002866 225 RGSAFKLLAESYPFHT---NKKLLTMF-DYESQSVNWMAQSAKEKGAKV----YSAWFKWPTLKLCSTDLRKQISSKKRR 296 (872)
Q Consensus 225 ATeALnLVaeslpf~~---Gd~ILT~~-DhEHnSVl~~~~~AkrkGaeV----~~Vpvd~p~g~Id~edLe~~I~~~~rr 296 (872)
-|.-++.+.-+| +++ .-+|+... .+++. -..+-..++-+|+.+ +.+.-++..--+..+++.+.|..
T Consensus 137 LTvNlh~Ll~sF-yKPTekR~KILlE~kaFPSD-hYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEk---- 210 (465)
T KOG3846|consen 137 LTVNLHSLLISF-YKPTEKRFKILLEKKAFPSD-HYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEK---- 210 (465)
T ss_pred hhhHHHHHHHHh-cCCcchhhhhhhccCCCCch-HHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHh----
Confidence 899999888776 232 22354221 12211 112223345567654 22332332233556777777764
Q ss_pred CCCCCceEEEEeCccCcccchhcHHHHHHH-HHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEE
Q 002866 297 KKDSAAGLFVFPVQSRVTGAKYSYQWMALA-QQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGC 375 (872)
Q Consensus 297 ~~~~~T~LVa~p~vSNvTG~i~PLe~I~~A-re~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~ 375 (872)
.+....||+|+.+..-||+.+++..|..| |..|++|=.|-|+++|. +|+-|-++++||.+-..||.+.+.|-|+|.
T Consensus 211 -ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgN--VpL~LHdWgVDFACWCSYKYlnaGaGgIgG 287 (465)
T KOG3846|consen 211 -NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGN--VPLQLHDWGVDFACWCSYKYLNAGAGGIGG 287 (465)
T ss_pred -cCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcC--CceEEeecCCceEEEeeecccccCCCccce
Confidence 34467899999999999999999988888 66899999999999997 899999999999999999986544889999
Q ss_pred EEEeCCCcccccCC
Q 002866 376 LLIKKSVMGSLQNQ 389 (872)
Q Consensus 376 LyVRk~~i~~L~P~ 389 (872)
|+|.........|.
T Consensus 288 lFvHekh~~~~~pr 301 (465)
T KOG3846|consen 288 LFVHEKHTKESLPR 301 (465)
T ss_pred eeeehhhhcchhhH
Confidence 99998876654443
No 170
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.11 E-value=3.4e-10 Score=126.90 Aligned_cols=173 Identities=14% Similarity=0.082 Sum_probs=132.8
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEE-EeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHH-HHHHHcCc
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLV-FTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMA-QSAKEKGA 267 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VV-FTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~-~~AkrkGa 267 (872)
+..|...+++.++++.+.++|+++ ++|.|+ ++.++|.|+..+..++--++|+.+|+.-.+ +- .|. +.+++.|+
T Consensus 32 HRs~~F~~i~~e~~~~L~~l~~~~-~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g~F---G~-r~~~eia~~~g~ 106 (374)
T TIGR01365 32 HRSKLGKEKLAEAIKKTREMLGVP-ADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWESF---GK-GWVTDVTKQLKL 106 (374)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEECHH---HH-HHHHHHHHhcCC
Confidence 344555689999999999999984 456655 589999999998888632477777654221 22 445 88999999
Q ss_pred -EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCCc
Q 002866 268 -KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 268 -eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
++..+.+.|. -.+++++++. . .. |+++|.--.||+++|++.+.... +++.++|||++++|. .
T Consensus 107 ~~v~~l~~~~g-~~~~~~~ve~---~---------~~-v~~vhnETSTGv~npv~~i~~~~-~~~lliVDavSs~g~--~ 169 (374)
T TIGR01365 107 PDVRVLEAEYG-KLPDLKKVDF---K---------ND-VVFTWNGTTSGVRVPNGDFIPAD-REGLTICDATSAAFA--Q 169 (374)
T ss_pred CCcEEEcCCCC-CCCCHHHcCC---C---------CC-EEEecCCCchheecccccccccc-CCCcEEEEccchhcC--C
Confidence 5888888874 4567777751 1 11 56888888899999997443222 589999999998886 6
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
+++++. +|+++++.+|.+|. |.|+++++++++.++..+
T Consensus 170 ~l~~d~--iDv~~tgsQK~L~~-ppGls~v~vs~~Al~~~~ 207 (374)
T TIGR01365 170 DLDYHK--LDVVTFSWQKVLGG-EGAHGMLILSPRAVARLE 207 (374)
T ss_pred CCChhH--CcEEEEechhccCC-CCceEEEEECHHHHHHHh
Confidence 888884 99999999999998 889999999999887654
No 171
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.10 E-value=2.3e-09 Score=122.29 Aligned_cols=162 Identities=14% Similarity=0.187 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC--------CCCCCCeEEEecccCchhHHHHHHHHHHcCcEE
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY--------PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKV 269 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl--------pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV 269 (872)
...+.++++|+++|++ .+++|+|+|+|+.+++.++ .+++|++||+. ...|.+... .....|+++
T Consensus 64 ~~~~fe~~lA~~~g~~----~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~-~~t~~a~~~---~v~~~G~~p 135 (438)
T PRK15407 64 FNDAFEKKLAEFLGVR----YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITV-AAGFPTTVN---PIIQNGLVP 135 (438)
T ss_pred hHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEEC-CCCcHHHHH---HHHHcCCEE
Confidence 3567899999999984 2899999999999888765 56789998866 334444432 234579999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccC
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSL 348 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipL 348 (872)
+.++++..+..++.+++++++.. +|++|.+.+ .+|...+++ +++.|+++|+.|++|++|+.|.. .-
T Consensus 136 v~vdvd~~~~~id~~~le~~i~~--------~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~--~~ 202 (438)
T PRK15407 136 VFVDVELPTYNIDASLLEAAVSP--------KTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGST--YD 202 (438)
T ss_pred EEEecCCCcCCcCHHHHHHHcCc--------CCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhh--cC
Confidence 99998755677899999887752 588888877 478888997 56788999999999999999862 11
Q ss_pred C--CCCCCCcEEEEccccc--CCCCCCceEEEEEeCCCc
Q 002866 349 G--LSLFRPDFIITSFYRV--FGFDPTGFGCLLIKKSVM 383 (872)
Q Consensus 349 D--Ls~l~~DFlv~S~HK~--fG~~PtGvG~LyVRk~~i 383 (872)
+ +..++ |+.+||||.. +.. -.| |+|+.+.+.+
T Consensus 203 g~~~G~~g-d~~~fSf~~~k~~~~-geG-G~l~t~d~~l 238 (438)
T PRK15407 203 GRMTGTFG-DIATLSFYPAHHITM-GEG-GAVFTNDPLL 238 (438)
T ss_pred CeeeeccC-ceEEEeCCCCCCccc-cCc-eEEEECCHHH
Confidence 2 33344 9999999852 321 125 8888877644
No 172
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.10 E-value=2.5e-09 Score=122.03 Aligned_cols=162 Identities=12% Similarity=0.053 Sum_probs=122.6
Q ss_pred CCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHH-HHHHHHcCcEE
Q 002866 191 GGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWM-AQSAKEKGAKV 269 (872)
Q Consensus 191 gNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~-~~~AkrkGaeV 269 (872)
+||. +....++||++.|+. | .+.|+|++.|+.++..++ .++||+||++.. -+.+...+ ...+++.|+++
T Consensus 59 ~nPt----v~~lE~~la~leg~~---~-av~~~SG~aAi~~al~al-l~~GD~VI~~~~-~Y~~T~~~~~~~l~~~Gi~v 128 (432)
T PRK06702 59 GNPT----LAAFEQKLAELEGGV---G-AVATASGQAAIMLAVLNI-CSSGDHLLCSST-VYGGTFNLFGVSLRKLGIDV 128 (432)
T ss_pred CCcH----HHHHHHHHHHHhCCC---c-EEEECCHHHHHHHHHHHh-cCCCCEEEECCC-chHHHHHHHHHHHHHCCCEE
Confidence 4665 456778999999984 2 677999999999988877 689999987643 22222222 33357789999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccC
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSL 348 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipL 348 (872)
.++.+ .+++++++++|.. +|++|.+.+.+|.++.+.|++ +++.||++|+.+++|++-+.|. -.
T Consensus 129 ~~vd~-----~~d~~~l~~~I~~--------~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~---~~ 192 (432)
T PRK06702 129 TFFNP-----NLTADEIVALAND--------KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPY---LC 192 (432)
T ss_pred EEECC-----CCCHHHHHHhCCc--------CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchh---hC
Confidence 98753 3577889888853 588999999999999999998 5678899999999999965442 22
Q ss_pred CCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 002866 349 GLSLFRPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
+.-++++|.++-|.-||+|+.-.++|.+.+
T Consensus 193 ~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 193 QAFEHGANIIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred ChhhcCCCEEEEccccccCCCcceeceEEE
Confidence 333679999999999998874445665555
No 173
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.10 E-value=9e-10 Score=121.59 Aligned_cols=171 Identities=11% Similarity=0.091 Sum_probs=120.6
Q ss_pred HHHHHHHHHHhc----CC--CCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHL----NI--PENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lL----gA--~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
..+.|+.||+++ |. ++++ .|++|+|+++|+.+++..+ .++|+.|++..- +.......++..|+++..+
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~~-~ii~t~G~~~~i~~~~~~~-~~~gd~Vl~~~P----~y~~~~~~~~~~g~~~~~v 144 (385)
T PRK09276 71 MLEFRKAVADWYKRRFGVELDPET-EVISLIGSKEGIAHIPLAF-VNPGDVVLVPDP----GYPVYKIGTIFAGGEPYFM 144 (385)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCC-cEEEccCcHHHHHHHHHHh-CCCCCEEEEcCC----CCcChHHHHHHcCCEEEEE
Confidence 346888888887 43 4432 4999999999999999887 478999876521 1222334466789999999
Q ss_pred eccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC----CC
Q 002866 273 WFKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG----PK 343 (872)
Q Consensus 273 pvd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a----G~ 343 (872)
|.+.. +..++.+++++.+.. +++++.++.-+|.||..+|.+ +++.|+++++++++|-+..- ++
T Consensus 145 ~~~~~~g~~~d~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~ 216 (385)
T PRK09276 145 PLKEENGFLPDLDAIPEDVAK--------KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGY 216 (385)
T ss_pred ecCCCCCCcCCHHHHHHhccc--------cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCC
Confidence 98643 244678888766642 578999988899999999974 45667899999999999542 22
Q ss_pred CCccCCCCC----CCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 344 DMDSLGLSL----FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 344 ~mipLDLs~----l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
. ...+.. .+..+++.|+=|.|| +.| +|+++..+++++.+.
T Consensus 217 ~--~~~~~~~~~~~~~~i~~~S~SK~~g--~~GlRiG~~i~~~~l~~~~~ 262 (385)
T PRK09276 217 K--PPSFLEVPGAKDVGIEFHSLSKTYN--MTGWRIGFAVGNADLIAGLG 262 (385)
T ss_pred C--CCChhccCCCcCCEEEEecchhhcC--CcchhheeeeCCHHHHHHHH
Confidence 1 112211 233577889999998 457 999987766655543
No 174
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.09 E-value=4.8e-09 Score=115.81 Aligned_cols=215 Identities=17% Similarity=0.247 Sum_probs=141.0
Q ss_pred CCCchhHHHHHhhcccCCCCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHH
Q 002866 130 YQSSDKIDQLRANEYLHLSPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMD 208 (872)
Q Consensus 130 y~~t~~ID~lR~~EFP~L~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~ 208 (872)
|.....+++.++ +|.. .+++.|+.+--.. .|+.+.+++.+ ....+ ..|+.+.. ...|+.||+
T Consensus 20 ~~~~~~~~~~~~-~~~~-~~~i~l~~~~~~~~~~~~~~~al~~--------~~~~~---~~Y~~~~g----~~lr~~ia~ 82 (371)
T PRK05166 20 YNAGLTIEEVRA-RYGV-PRIAKLGSNENPLGPSPAVRRAFAD--------IAELL---RLYPDPQG----RALREAIAA 82 (371)
T ss_pred CCCCCCHHHHHH-hcCC-cceEEcCCCCCCCCCCHHHHHHHHH--------HHHHh---hcCCCCcH----HHHHHHHHH
Confidence 433335666664 4643 3477887664433 34445554321 11111 23554442 279999999
Q ss_pred hcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHH
Q 002866 209 HLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRK 288 (872)
Q Consensus 209 lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~ 288 (872)
++|++++ +|++|+|+++++++++.++ +++|+.|++.. +........++..|+++..++.+. +..++.+++++
T Consensus 83 ~~~~~~~--~i~~t~G~~~~l~~~~~~~-~~~gd~vli~~----P~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~ 154 (371)
T PRK05166 83 RTGVPAD--RIILGNGSEDLIAVICRAV-LRPGDRVVTLY----PSFPLHEDYPTMMGARVERVTVTP-DLGFDLDALCA 154 (371)
T ss_pred HhCcCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEcC----CChHHHHHHHHHcCCeEEEeecCC-CCCCCHHHHHH
Confidence 9999876 5999999999999999887 57899987652 223334456677899999999874 45688999988
Q ss_pred HHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHH--HCCcEEEeecccc--CCC-CCcc-CCC-CCC-CCcEEE
Q 002866 289 QISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQ--QNHWHVLLDAGSL--GPK-DMDS-LGL-SLF-RPDFII 359 (872)
Q Consensus 289 ~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Ar--e~G~~VLVDAAQ~--aG~-~mip-LDL-s~l-~~DFlv 359 (872)
.+.. ++++|.++..+|.||.++|.+.+ +.++ +.++++++|.+-. ... ...+ +.+ ... .--+++
T Consensus 155 ~~~~--------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i 226 (371)
T PRK05166 155 AVAR--------APRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVL 226 (371)
T ss_pred hhhc--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEE
Confidence 7753 47899999999999999999744 3333 2478899999832 210 0001 111 111 123788
Q ss_pred EcccccCCCCCCc--eEEEEEe
Q 002866 360 TSFYRVFGFDPTG--FGCLLIK 379 (872)
Q Consensus 360 ~S~HK~fG~~PtG--vG~LyVR 379 (872)
.|+=|.||- .| +|.+++.
T Consensus 227 ~SfSK~~~l--~GlRiG~~i~~ 246 (371)
T PRK05166 227 RTFSKAYGL--AGLRVGYGLVS 246 (371)
T ss_pred eechHhhhc--chhheeeeecC
Confidence 999999983 25 6877764
No 175
>PRK07683 aminotransferase A; Validated
Probab=99.08 E-value=1.9e-09 Score=119.83 Aligned_cols=172 Identities=13% Similarity=0.172 Sum_probs=121.4
Q ss_pred HHHHHHHHHHhc----CC--CCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHL----NI--PENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lL----gA--~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
..+.|+.+|+++ |+ +++ -.|++|+|+|+|+.+++..+ +++|+.|++..- ....+...++..|+++..+
T Consensus 67 ~~~lr~~ia~~l~~~~g~~~~~~-~~I~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p----~y~~~~~~~~~~g~~~~~~ 140 (387)
T PRK07683 67 LLELRKAACNFVKDKYDLHYSPE-SEIIVTIGASEAIDIAFRTI-LEPGTEVILPAP----IYPGYEPIIRLCGAKPVFI 140 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHh-CCCCCEEEEcCC----CccchHHHHHHcCCEEEEe
Confidence 356888888887 33 444 14999999999999999887 578999887532 1222333456679999999
Q ss_pred eccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCC-CCCcc
Q 002866 273 WFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGP-KDMDS 347 (872)
Q Consensus 273 pvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG-~~mip 347 (872)
+.+..+..++.+++++.+.. ++++++++..+|.||..+|.+ ++..|+++|+++++|.+..-. ...-.
T Consensus 141 ~~~~~~~~~~~~~l~~~~~~--------~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 212 (387)
T PRK07683 141 DTRSTGFRLTAEALENAITE--------KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPH 212 (387)
T ss_pred ecCcccCCCCHHHHHHhcCc--------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCc
Confidence 98754556677888877642 478999999999999999964 356778999999999994321 00011
Q ss_pred CCCCCC----CCcEEEEcccccCCCCCCc--eEEEEEeCCCcccc
Q 002866 348 LGLSLF----RPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSL 386 (872)
Q Consensus 348 LDLs~l----~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L 386 (872)
..+..+ +-.+++.|+=|.||. | | +|++++.+..++.+
T Consensus 213 ~~~~~~~~~~~~vi~~~s~SK~~~~-p-GlRiG~i~~~~~l~~~~ 255 (387)
T PRK07683 213 TSIAHFPEMREKTIVINGLSKSHSM-T-GWRIGFLFAPSYLAKHI 255 (387)
T ss_pred CChhhccCCcCCeEEEeeccccccC-c-cceeEEEEcCHHHHHHH
Confidence 122222 235889999999985 2 6 88888776655444
No 176
>PRK07550 hypothetical protein; Provisional
Probab=99.08 E-value=1.2e-09 Score=120.79 Aligned_cols=172 Identities=12% Similarity=0.095 Sum_probs=116.4
Q ss_pred HHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec
Q 002866 201 DIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 201 eARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv 274 (872)
+.|+.+++++ | ++++ +|++|+|+++|+.+++..+ .++||.|++..- .+... ...++..|+++..++.
T Consensus 71 ~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p-~y~~~---~~~~~~~g~~~~~v~~ 143 (386)
T PRK07550 71 ELREAYAAHYSRLYGAAISPE--QVHITSGCNQAFWAAMVTL-AGAGDEVILPLP-WYFNH---KMWLDMLGIRPVYLPC 143 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHHHHHHHHHh-cCCCCEEEEcCC-CCcch---HHHHHhcCCEEEEEec
Confidence 4556666555 4 4444 5999999999999999988 478999876521 11222 2345678999999998
Q ss_pred cC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCC-C-Ccc
Q 002866 275 KW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPK-D-MDS 347 (872)
Q Consensus 275 d~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~-~-mip 347 (872)
+. .+..++.+++++++.. +++++.+..-+|.||..+|.+ +++.|+++|+++++|.+-..-. . ..+
T Consensus 144 ~~~~~~~~~~~~l~~~~~~--------~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~ 215 (386)
T PRK07550 144 DEGPGLLPDPAAAEALITP--------RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAP 215 (386)
T ss_pred CCCcCCCCCHHHHHHHhcc--------cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCC
Confidence 64 3455788889888853 467777778899999999964 3466789999999999842100 0 001
Q ss_pred CCC-C--CCC-CcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 348 LGL-S--LFR-PDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 348 LDL-s--~l~-~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
..+ + ..+ -.+++.|+.|.||.+=..+|+++..++.+..+.
T Consensus 216 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~ 259 (386)
T PRK07550 216 HDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIE 259 (386)
T ss_pred cchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHH
Confidence 111 1 111 246789999998841124899988776655443
No 177
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.07 E-value=4.5e-09 Score=121.65 Aligned_cols=198 Identities=12% Similarity=0.125 Sum_probs=133.7
Q ss_pred CceecccCCCC----CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc------CCCCCCCc
Q 002866 149 PKVCLDYCGFG----LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL------NIPENEYG 218 (872)
Q Consensus 149 ~~IYLDyAAtg----p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL------gA~~dEY~ 218 (872)
+.+.|+.|--. +.|+.+++++.+ .+. ....|+.+ .-..+.|+.||+++ +++++ +
T Consensus 147 ~~i~l~~G~p~~~~~~~p~~~~~~~~~-------~~~----~~~~Y~~~---~G~~~lReaia~~~~~~~~~~~~~~--~ 210 (517)
T PRK13355 147 HILKLNIGNPAPFGFRTPDEVVYDMAQ-------QLT----DTEGYSDS---KGLFSARKAIMQYAQLKGLPNVDVD--D 210 (517)
T ss_pred CeEEecCcCCCcCCCCCCHHHHHHHHH-------Hhh----cCCCCCCC---cChHHHHHHHHHHHHhcCCCCCChh--H
Confidence 47888876553 236667776432 111 11234433 22568999999998 67776 5
Q ss_pred EEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHHHhhhhccC
Q 002866 219 LVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQISSKKRRK 297 (872)
Q Consensus 219 VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~I~~~~rr~ 297 (872)
|++|+|+++|+.+++..+ ..+||+|++..- .+. .+...++..|+++..++.+.. +..++.++|++++..
T Consensus 211 I~it~G~~eal~~~~~~l-~~~Gd~Vli~~P-~y~---~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~----- 280 (517)
T PRK13355 211 IYTGNGVSELINLSMSAL-LDDGDEVLIPSP-DYP---LWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITS----- 280 (517)
T ss_pred EEEeCcHHHHHHHHHHHh-CCCCCEEEEcCC-CCc---CHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCc-----
Confidence 999999999999999887 578999886531 122 233445667999998887643 345788999887742
Q ss_pred CCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc----CCCCCccCCCCCCCCcE---EEEcccccC
Q 002866 298 KDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL----GPKDMDSLGLSLFRPDF---IITSFYRVF 366 (872)
Q Consensus 298 ~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~----aG~~mipLDLs~l~~DF---lv~S~HK~f 366 (872)
+|+++.+..-+|.||.++|.+ ++..|++++++|++|-+-. -+.. ...+..+.+|. ++.|+-|.|
T Consensus 281 ---~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~--~~s~~~~~~~~~vi~~~S~SK~~ 355 (517)
T PRK13355 281 ---RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLE--HTSIASLAPDLFCVTFSGLSKSH 355 (517)
T ss_pred ---CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCC--cccHHHhCCCCeEEEEecchhhc
Confidence 588999999999999999953 3567899999999999831 1211 12222233453 236888988
Q ss_pred CCCCCc--eEEEEEe
Q 002866 367 GFDPTG--FGCLLIK 379 (872)
Q Consensus 367 G~~PtG--vG~LyVR 379 (872)
+. .| +|.+++.
T Consensus 356 ~~--~G~RiG~~i~~ 368 (517)
T PRK13355 356 MI--AGYRIGWMILS 368 (517)
T ss_pred cC--cccceEEEEee
Confidence 74 35 6777753
No 178
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.07 E-value=1.6e-09 Score=120.51 Aligned_cols=174 Identities=13% Similarity=0.139 Sum_probs=120.1
Q ss_pred HHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.||+++ | +++++ .|++|+|+++|+.+++..+ +++||+|++.. ..+... ...++..|+++..+|
T Consensus 76 ~~lr~aia~~~~~~~~~~~~~~~-~i~vt~G~~~al~~~~~~~-~~~gd~Vlv~~-P~y~~~---~~~~~~~g~~~~~v~ 149 (394)
T PRK05942 76 ASFRQAITDWYHRRYGVELDPDS-EALPLLGSKEGLTHLALAY-VNPGDVVLVPS-PAYPAH---FRGPLIAGAQIYPII 149 (394)
T ss_pred HHHHHHHHHHHHHHHCCCcCCCC-eEEEccChHHHHHHHHHHh-CCCCCEEEEcC-CCCcch---HHHHHHcCCEEEEee
Confidence 46888888877 4 34431 4889999999999999887 68899987652 222322 233456799999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc--C--CCC
Q 002866 274 FKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL--G--PKD 344 (872)
Q Consensus 274 vd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~--a--G~~ 344 (872)
++.. +..++.+++++.+.. +++++.++..+|.||..+|.+ ++..|+++++++++|.+-. . +..
T Consensus 150 ~~~~~~~~~d~~~l~~~~~~--------~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~ 221 (394)
T PRK05942 150 LKPENDWLIDLSSIPEEVAQ--------QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQ 221 (394)
T ss_pred cCCccCCccCHHHHHHhccc--------cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCC
Confidence 8643 235888998877742 588999988899999999964 3456799999999999832 1 110
Q ss_pred Ccc-CCCCC-CCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 345 MDS-LGLSL-FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 345 mip-LDLs~-l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
..+ .++.. ....+++.|+=|.||.+.-.+|+++..++.++.+.
T Consensus 222 ~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~ 266 (394)
T PRK05942 222 PTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLR 266 (394)
T ss_pred CCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHH
Confidence 001 11211 12346678888999842233899998877766554
No 179
>PRK07777 aminotransferase; Validated
Probab=99.06 E-value=2.7e-09 Score=118.09 Aligned_cols=172 Identities=15% Similarity=0.117 Sum_probs=118.9
Q ss_pred HHHHHHHHHh----cCCC--CCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDH----LNIP--ENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~l----LgA~--~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.|+++ +|++ ++ ..|++|+|+|+|+.+++.++ ..+||+|++..- .+... ...++..|+++..++
T Consensus 64 ~~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~~-~~~gd~vli~~p-~y~~~---~~~~~~~g~~~~~~~ 137 (387)
T PRK07777 64 PELRAAIAAQRRRRYGLEYDPD-TEVLVTVGATEAIAAAVLGL-VEPGDEVLLIEP-YYDSY---AAVIAMAGAHRVPVP 137 (387)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC-CcEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCC-Cchhh---HHHHHHCCCEEEEee
Confidence 3566666654 5654 33 15999999999999988887 478999876532 23333 234556799999888
Q ss_pred ccCC--CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC----CC
Q 002866 274 FKWP--TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG----PK 343 (872)
Q Consensus 274 vd~p--~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a----G~ 343 (872)
++.. +..++.++|++++.. ++++|.++..+|.||..+|.+ +++.|+++++++++|.+... +.
T Consensus 138 ~~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~ 209 (387)
T PRK07777 138 LVPDGRGFALDLDALRAAVTP--------RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA 209 (387)
T ss_pred cCCccCCCcCCHHHHHHhcCc--------ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC
Confidence 8643 245788988887742 478999999999999999854 34677899999999988531 21
Q ss_pred CCccCC-CCC-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 344 DMDSLG-LSL-FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 344 ~mipLD-Ls~-l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
...++. +.. .+.++++.|+.|.||. | | +|+++..+.+++.+.
T Consensus 210 ~~~~~~~~~~~~~~~i~~~S~SK~~g~-~-GlRiG~~~~~~~l~~~~~ 255 (387)
T PRK07777 210 RHLPLATLPGMRERTVTISSAAKTFNV-T-GWKIGWACGPAPLIAAVR 255 (387)
T ss_pred CcccHhhCCCCcCcEEEEeechhhccC-c-CceeEEEecCHHHHHHHH
Confidence 101221 111 3468999999999984 3 6 688887766555443
No 180
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.06 E-value=1e-08 Score=117.34 Aligned_cols=174 Identities=10% Similarity=0.041 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHH-HHHHHHHhhCCCC--CCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRG-SAFKLLAESYPFH--TNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnAT-eALnLVaeslpf~--~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
..+..+.-+.+++++|++.-+ ..++++++| .++-++..++..+ +|+.|+++.. .|.++. ..+.-.|++++++
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~-~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~-th~S~~---kAi~~~G~~pv~V 178 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIK-SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRI-DQKSCI---KAISTAGFEPRVI 178 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCC-EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECc-ChHHHH---HHHHHcCCeEEEe
Confidence 456778888999999997433 478899999 6877777666532 5788776643 356554 3445579999999
Q ss_pred ec--cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCcc-CcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccC
Q 002866 273 WF--KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQS-RVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSL 348 (872)
Q Consensus 273 pv--d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vS-NvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipL 348 (872)
+. +.++..+++++|+++|... ++++.++++...+ ..+|..-|++. .+.|+++|+++|+|+|+..+.. ...
T Consensus 179 d~~~d~~~~~iD~e~Le~aIt~~-----~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~-~~~ 252 (444)
T TIGR03531 179 ETVLDGDELTTDVEDIERAIEEI-----GPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN-KYM 252 (444)
T ss_pred eeeecCcCCCcCHHHHHHHHHhc-----cCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh-hhh
Confidence 94 5556889999999999742 1234555554433 44568889974 5678999999999999886541 111
Q ss_pred CC--C--CC-CCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 349 GL--S--LF-RPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 349 DL--s--~l-~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
.+ . .. .+|.+++|+||+|.. |.+.|++++++.
T Consensus 253 ~~~~~g~~~Grad~vv~s~hK~l~~-pg~Gg~I~~~d~ 289 (444)
T TIGR03531 253 ELINKAIKVGRVDAVVSSTDKNFMV-PVGGAIIYSFDE 289 (444)
T ss_pred hhhhccccccCCCeEEEeCccCCCC-CCCEEEEEECCH
Confidence 11 1 12 479999999999887 778777777553
No 181
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.05 E-value=6.2e-10 Score=122.17 Aligned_cols=169 Identities=13% Similarity=0.162 Sum_probs=122.9
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCC-CeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTN-KKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT 278 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~G-d~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~ 278 (872)
.+.|+.+|+++|++++ .|++|+|+++++.+++..+ .++| +.|++.. ++...+...++..|+++..+|.+. +
T Consensus 60 ~~l~~~~a~~~g~~~~--~I~~~~Gs~e~i~~~~~~~-~~~g~~~vli~~----P~y~~y~~~~~~~G~~~~~v~~~~-~ 131 (351)
T PRK01688 60 KAVIENYAAYAGVKPE--QVLVSRGADEGIELLIRAF-CEPGKDAILYCP----PTYGMYSVSAETIGVEIRTVPTLD-N 131 (351)
T ss_pred HHHHHHHHHHhCCCHH--HEEEcCCHHHHHHHHHHHh-cCCCCCEEEEcC----CCHHHHHHHHHHcCCEEEEeecCC-C
Confidence 5789999999999887 5999999999999999987 4676 7777652 223334556777899999999864 4
Q ss_pred CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHH-HHH--HCCcEEEeeccc--cCCCCCccCCC-CC
Q 002866 279 LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMA-LAQ--QNHWHVLLDAGS--LGPKDMDSLGL-SL 352 (872)
Q Consensus 279 g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~-~Ar--e~G~~VLVDAAQ--~aG~~mipLDL-s~ 352 (872)
..++.+++++++. +++++.++.-+|.||+.++.+.+. .++ +.+++|++|.+. +.+.. ..+++ ..
T Consensus 132 ~~~d~~~l~~~~~---------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~-s~~~~~~~ 201 (351)
T PRK01688 132 WQLDLPAIADNLD---------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQA-SLAGWLAE 201 (351)
T ss_pred CCCCHHHHHHhcc---------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCC-ChHHHHhh
Confidence 6788888877652 488999999999999999987543 232 125789999993 22210 01111 22
Q ss_pred CCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccccC
Q 002866 353 FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQN 388 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~P 388 (872)
.+-=+++-|+.|+|| ..| +|.++..++.++.+..
T Consensus 202 ~~n~iv~rSfSK~~g--laGlRiGy~i~~~~~i~~l~~ 237 (351)
T PRK01688 202 YPHLVILRTLSKAFA--LAGLRCGFTLANEEVINLLLK 237 (351)
T ss_pred CCCEEEEecchHhhc--CHHHHHhHHhCCHHHHHHHHh
Confidence 223378889999999 447 5999998888776653
No 182
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.03 E-value=4.7e-09 Score=117.26 Aligned_cols=165 Identities=13% Similarity=0.087 Sum_probs=116.7
Q ss_pred HHHHHHHHHHhcCC------CCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHLNI------PENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lLgA------~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
..++|+.|+++++. +++ +|++|+|+|+|+.+++.++. ++|++|++.. .. ...+...++..|+++..+
T Consensus 75 ~~~lr~~ia~~l~~~~~~~~~~~--~ii~t~G~t~al~~~~~~l~-~~gd~Vlv~~-p~---y~~~~~~~~~~g~~~~~~ 147 (403)
T TIGR01265 75 ALAAREAVAEYLSSDLPGKLTAD--DVVLTSGCSQAIEICIEALA-NPGANILVPR-PG---FPLYDTRAAFSGLEVRLY 147 (403)
T ss_pred CHHHHHHHHHHHHhhcCCCCCHH--HEEEecChHHHHHHHHHHhC-CCCCEEEEeC-CC---chhHHHHHHHcCCEEEEe
Confidence 45789999999985 344 59999999999999999985 7899987652 12 223345567789999998
Q ss_pred eccC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH---H-HHHHHHHCCcEEEeecccc--CCCCC
Q 002866 273 WFKW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSL--GPKDM 345 (872)
Q Consensus 273 pvd~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~--aG~~m 345 (872)
+++. .+..++.+++++++.. +++++.+++.+|.||..+|. + ++..|+++|+++++|.+.. .-...
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~--------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~ 219 (403)
T TIGR01265 148 DLLPEKDWEIDLDGLEALADE--------KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDA 219 (403)
T ss_pred cCCcccCCccCHHHHHHHhCc--------CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC
Confidence 8743 2356888999887742 47899999999999999984 3 4567899999999999942 11100
Q ss_pred ccCCCCCCCC---cEEEEcccccCCCCC-CceEEEEEe
Q 002866 346 DSLGLSLFRP---DFIITSFYRVFGFDP-TGFGCLLIK 379 (872)
Q Consensus 346 ipLDLs~l~~---DFlv~S~HK~fG~~P-tGvG~LyVR 379 (872)
....+..+.. =.++.|+-|.|+. | ..+|++++.
T Consensus 220 ~~~~~~~~~~~~~vi~~~S~SK~~~~-pGlRiG~~v~~ 256 (403)
T TIGR01265 220 PFIPMASFASIVPVLSLGGISKRWVV-PGWRLGWIIIH 256 (403)
T ss_pred CccchhhhccCCcEEEEeecccccCC-CcceEEEEEEe
Confidence 0112222222 2567899998875 3 237777764
No 183
>PRK07682 hypothetical protein; Validated
Probab=99.02 E-value=2.6e-09 Score=117.65 Aligned_cols=173 Identities=14% Similarity=0.167 Sum_probs=121.6
Q ss_pred HHHHHHHHHHhcC------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHLN------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lLg------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
..+.|+.||++++ +++++ +|++|+|+++|+.+++..+ .++|+.|++..- .+. .+...++..|+++..+
T Consensus 59 ~~~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G~~~al~~~~~~l-~~~gd~vl~~~p-~y~---~~~~~~~~~g~~~~~~ 132 (378)
T PRK07682 59 LLELRQEIAKYLKKRFAVSYDPND-EIIVTVGASQALDVAMRAI-INPGDEVLIVEP-SFV---SYAPLVTLAGGVPVPV 132 (378)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCC-cEEEeCChHHHHHHHHHHh-CCCCCEEEEeCC-Cch---hhHHHHHHcCCEEEEe
Confidence 3468888888874 34432 5999999999999999887 578999887632 222 2334456679999888
Q ss_pred eccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCC-C--
Q 002866 273 WFKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPK-D-- 344 (872)
Q Consensus 273 pvd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~-~-- 344 (872)
+.+.. +..++.++|++++.. +++++.++..+|.||..+|.+ ++..|+++++++++|.+..... +
T Consensus 133 ~~~~~~~~~~d~~~l~~~~~~--------~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~ 204 (378)
T PRK07682 133 ATTLENEFKVQPAQIEAAITA--------KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA 204 (378)
T ss_pred ecCCccCCCCCHHHHHhhcCc--------ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC
Confidence 87532 346788989887742 478888888899999999864 3456789999999999954211 0
Q ss_pred Ccc-CCCCC-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 345 MDS-LGLSL-FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 345 mip-LDLs~-l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
..+ ..+.. ..-.+++.|+-|.||. .| +|+++..+++++.+.
T Consensus 205 ~~~~~~~~~~~~~~i~~~S~SK~~~~--~GlR~G~~~~~~~~i~~l~ 249 (378)
T PRK07682 205 YTSFASIKGMRERTILISGFSKGFAM--TGWRLGFIAAPVYFSEAML 249 (378)
T ss_pred CCChhhcccccCCEEEEecCcccccC--hhhhhhhhhcCHHHHHHHH
Confidence 001 11111 2346899999999984 37 899998887766554
No 184
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.00 E-value=7.5e-09 Score=110.50 Aligned_cols=174 Identities=13% Similarity=0.094 Sum_probs=136.1
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec-cCCC
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF-KWPT 278 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv-d~p~ 278 (872)
.+--+.+|+|||++. +-+|.||.+|=-.|.+++- ++||-|+....-+..+. -.|++.|.+|..+|- ..|.
T Consensus 64 ~~F~~dlaeFlg~D~----~R~t~GARe~KfavMhal~-~~gd~vV~D~~aHYtty----vAAEragl~v~eVp~tg~Pe 134 (382)
T COG1103 64 KDFLEDLAEFLGMDE----VRVTAGAREAKFAVMHALC-KEGDWVVVDSLAHYTTY----VAAERAGLNVAEVPNTGYPE 134 (382)
T ss_pred HHHHHHHHHHhCCce----eeecccchhhHHHHHHHhc-cCCCEEEEcCcchHHHH----HHHHhcCCeEEecCCCCCCc
Confidence 344455999999963 7899999999999999885 67888776543222322 247888999999985 3456
Q ss_pred CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcE
Q 002866 279 LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDF 357 (872)
Q Consensus 279 g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DF 357 (872)
-.|+++...+.|..-+. .......|..++|+...-|.+.+.+ ..+.|+++|+.+||.+|-.+|. +|++...+++||
T Consensus 135 y~i~~e~y~~viee~~~-~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Gr--mpvs~ke~g~DF 211 (382)
T COG1103 135 YKITPEGYAEVIEEVKD-EGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGR--MPVSGKEIGADF 211 (382)
T ss_pred eEecHHHHHHHHHHHHh-ccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecc--ccccccccCCCE
Confidence 67899988887765332 1223578999999999999999997 5678899999999999999997 799999999999
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 358 IITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 358 lv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
++.|+||-+.+ -.=+|+|-++.++.+.+
T Consensus 212 iVgSGHKsmAA-s~PiGvl~~~eE~ae~V 239 (382)
T COG1103 212 IVGSGHKSMAA-SAPIGVLAMSEEWAEIV 239 (382)
T ss_pred EEecCccchhc-cCCeeEEeehhHHHHHH
Confidence 99999996553 22389999999887654
No 185
>PRK09082 methionine aminotransferase; Validated
Probab=98.99 E-value=4.6e-09 Score=116.55 Aligned_cols=176 Identities=13% Similarity=0.141 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHhcCCCCCC-CcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENE-YGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dE-Y~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
.+.+.+.+.+.+++|++.+. ..|++|+|+|+|+.+++.++ ..+||.|++.. ..+.++. ..++..|+++..++++
T Consensus 71 ~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~Vli~~-p~y~~~~---~~~~~~g~~~~~~~~~ 145 (386)
T PRK09082 71 ALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILAL-VRPGDEVIVFD-PSYDSYA---PAIELAGGRAVRVALQ 145 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHH-cCCCCEEEEeC-CCchhhH---HHHHHcCCEEEEEecC
Confidence 44555666666677875432 25999999999999999887 47899988653 2344443 3345579999999997
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc----CCCC-Cc
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL----GPKD-MD 346 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~----aG~~-mi 346 (872)
..+..++.+++++++.. +++++.++..+|.||..++.+ +++.|+++++++++|.+-. .+.. ..
T Consensus 146 ~~~~~~d~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s 217 (386)
T PRK09082 146 PPDFRVDWQRFAAAISP--------RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHAS 217 (386)
T ss_pred cccccCCHHHHHHhcCc--------cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCC
Confidence 54567888999887742 478999999999999997764 3567899999999999842 1110 00
Q ss_pred cCCCCC-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 347 SLGLSL-FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 347 pLDLs~-l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
...+.. .+..+++.|+-|.||. .| +|+++..+++++.+.
T Consensus 218 ~~~~~~~~~~~i~~~S~SK~~~~--~G~RiG~iv~~~~l~~~~~ 259 (386)
T PRK09082 218 VLRHPELRERAFVVSSFGKTYHV--TGWKVGYCVAPAALSAEFR 259 (386)
T ss_pred hhhCcCccCcEEEEeechhhccc--hhhhhhhhhCCHHHHHHHH
Confidence 112211 2356889999999984 36 688887766655443
No 186
>PTZ00377 alanine aminotransferase; Provisional
Probab=98.96 E-value=1.3e-08 Score=116.70 Aligned_cols=171 Identities=12% Similarity=0.052 Sum_probs=119.3
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC------CCCCCCcEEEeC
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN------IPENEYGLVFTV 223 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg------A~~dEY~VVFTs 223 (872)
.+-+|.++++++|..+++++.+ .+...-.....|+.+ .-+.+.|+.||++++ ++++ +|++|+
T Consensus 78 ~~i~~~~~~~~~P~~~~~~~~~-------~~~~~~~~~~~Y~~~---~G~~~LR~aia~~~~~~~g~~~~~~--~I~it~ 145 (481)
T PTZ00377 78 FLLEDPSVSSLFPADVVARAKE-------YLNAIGGGTGAYTDS---AGYPFVRKAVAAFIERRDGVPKDPS--DIFLTD 145 (481)
T ss_pred hhhcCccccccCCHHHHHHHHH-------HHHhCCCcccCcCcc---cCCHHHHHHHHHHHHHhcCCCCChh--hEEEcC
Confidence 3456777889999888887432 111110011124332 234578889998875 4555 599999
Q ss_pred CHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHHHhhhhccCCCCCc
Q 002866 224 SRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 224 nATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
|+++|+.+++..+-..+||.|++.. +........++..|++++.++++.. +..++.++|++.+....+ ...++
T Consensus 146 Ga~~al~~~~~~l~~~~gD~Vlv~~----P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~--~~~~~ 219 (481)
T PTZ00377 146 GASSGIKLLLQLLIGDPSDGVMIPI----PQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVR--NGITP 219 (481)
T ss_pred CHHHHHHHHHHHhccCCCCEEEECC----CCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHh--cCCCe
Confidence 9999999999987436899988752 2222344556678999999998743 346889999998864211 12258
Q ss_pred eEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecc
Q 002866 303 GLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAG 338 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAA 338 (872)
+++.+..-+|.||..++.+ ++..|++++++++.|-+
T Consensus 220 k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~ 259 (481)
T PTZ00377 220 RALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEV 259 (481)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehh
Confidence 8888888899999999964 34667899999999988
No 187
>PLN00175 aminotransferase family protein; Provisional
Probab=98.95 E-value=1.2e-08 Score=114.93 Aligned_cols=172 Identities=12% Similarity=0.142 Sum_probs=119.9
Q ss_pred HHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec
Q 002866 201 DIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 201 eARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv 274 (872)
+.|+.|++++ | ++++ ..|++|+|+|+|+.+++.++ .++||+|++.. ..+. .+...++..|++++.+++
T Consensus 95 ~Lr~aia~~~~~~~g~~~~~~-~~I~vt~G~~~al~~~~~~l-~~~gd~Vlv~~-P~y~---~~~~~~~~~g~~~~~v~~ 168 (413)
T PLN00175 95 ELNSAIAERFKKDTGLVVDPE-KEVTVTSGCTEAIAATILGL-INPGDEVILFA-PFYD---SYEATLSMAGAKIKTVTL 168 (413)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CCEEEeCCHHHHHHHHHHHh-CCCCCEEEEeC-CCch---hHHHHHHHcCCEEEEEEC
Confidence 4666666655 4 4443 15999999999999998887 57899988763 2222 334456678999999998
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC---CCCCcc
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG---PKDMDS 347 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a---G~~mip 347 (872)
+.++..++.++|++++.. +++++.++..+|.||..++.+ ++..|+++++++++|-+-.. .....+
T Consensus 169 ~~~~~~~~~~~l~~~~~~--------~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s 240 (413)
T PLN00175 169 RPPDFAVPEDELKAAFTS--------KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHIS 240 (413)
T ss_pred CcccCCCCHHHHHHhcCc--------CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccC
Confidence 754467888999887742 488999999999999999865 34567899999999998321 110011
Q ss_pred -CCCCC-CCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 348 -LGLSL-FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 348 -LDLs~-l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
..+.. ....+++.|+=|.||.+=.-+|+++..+.++..+
T Consensus 241 ~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l 281 (413)
T PLN00175 241 MASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV 281 (413)
T ss_pred hhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHH
Confidence 11211 2345788999999985112379888777665444
No 188
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=98.95 E-value=2e-08 Score=111.42 Aligned_cols=218 Identities=12% Similarity=0.155 Sum_probs=141.6
Q ss_pred hHHHHHhhcccCCCCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCC
Q 002866 135 KIDQLRANEYLHLSPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIP 213 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~ 213 (872)
....+++ .|.. ...+.|+.+-... +|+.+++++.+ .+. . ...|..+. ..+.|+.||+++|++
T Consensus 18 ~~~~~~~-~~~~-~~~i~l~~nen~~~~~~~v~~a~~~-------~~~-~---~~~Yp~~g----~~~Lr~aia~~~~~~ 80 (366)
T PRK01533 18 SPEQMKE-VYGD-HSFVKLASNENPFGCSPRVLDELQK-------SWL-D---HALYPDGG----ATTLRQTIANKLHVK 80 (366)
T ss_pred ChHHHHH-hcCC-CceEEeCCCCCCCCCCHHHHHHHHH-------HHH-h---cCcCCCCC----HHHHHHHHHHHhCCC
Confidence 3444443 2432 3478888766553 45667776432 111 1 12342222 357999999999998
Q ss_pred CCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhh
Q 002866 214 ENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSK 293 (872)
Q Consensus 214 ~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~ 293 (872)
++ .|++|+|+++++.+++..+ .++|+.|++.. ++.......++..|+++..+|.+. ..++.++|++++..
T Consensus 81 ~~--~I~vt~Gs~e~i~~~~~~l-~~~gd~vlv~~----P~y~~~~~~~~~~g~~v~~v~~~~--~~~d~~~l~~~~~~- 150 (366)
T PRK01533 81 ME--QVLCGSGLDEVIQIISRAV-LKAGDNIVTAG----ATFPQYRHHAIIEGCEVKEVALNN--GVYDLDEISSVVDN- 150 (366)
T ss_pred cc--eEEECCCHHHHHHHHHHHh-cCCCCEEEEcC----CcHHHHHHHHHHcCCEEEEeecCC--CCcCHHHHHHHhCc-
Confidence 87 4999999999999999987 47899987652 233344556777899999999863 46889999887742
Q ss_pred hccCCCCCceEEEEeCccCcccchhcHHHHH----HHHHCCcEEEeecccc--CCC-CC-ccCC-CCCCCCcEEEEcccc
Q 002866 294 KRRKKDSAAGLFVFPVQSRVTGAKYSYQWMA----LAQQNHWHVLLDAGSL--GPK-DM-DSLG-LSLFRPDFIITSFYR 364 (872)
Q Consensus 294 ~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~----~Are~G~~VLVDAAQ~--aG~-~m-ipLD-Ls~l~~DFlv~S~HK 364 (872)
+++++.++.-+|.||+++|.+.+. .|++++ .+++|-+-. ... .. -.+. +...+--+++.|+=|
T Consensus 151 -------~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK 222 (366)
T PRK01533 151 -------DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSK 222 (366)
T ss_pred -------CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchH
Confidence 478999999999999999997543 234455 567787732 210 00 0111 112223478899999
Q ss_pred cCCCCCCceEEEEEeCCCccccc
Q 002866 365 VFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 365 ~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.||.+=--+|.++..+++++.+.
T Consensus 223 ~~~l~GlRiG~~i~~~~~~~~l~ 245 (366)
T PRK01533 223 AYGLASFRVGYAVGHEELIEKLN 245 (366)
T ss_pred HhcChHHHHhHHhCCHHHHHHHH
Confidence 99841122688877666655543
No 189
>PRK09064 5-aminolevulinate synthase; Validated
Probab=98.94 E-value=2.1e-08 Score=111.70 Aligned_cols=168 Identities=14% Similarity=0.102 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
....+.++++|+++|.+ + .++|++| ++|...++..+ .+.+++.|++. .++|.++.... +..|+++..++.
T Consensus 91 ~~~~~l~~~la~~~g~~-~--~~~~~sG-~~an~~ai~~l~~~~~~~~i~~~-~~~h~s~~~~~---~~~~~~~~~~~~- 161 (407)
T PRK09064 91 HYHVELERELADLHGKE-A--ALVFTSG-YVSNDATLSTLAKLIPDCVIFSD-ELNHASMIEGI---RRSRCEKHIFRH- 161 (407)
T ss_pred HHHHHHHHHHHHHhCCC-c--EEEECcH-HHHHHHHHHHHhCCCCCCEEEEe-CcchHHHHHHH---HHcCCcEEEECC-
Confidence 46778999999999952 2 3666655 44544333332 23345444443 56677764322 335777654432
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCC-CCc--c----
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPK-DMD--S---- 347 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~-~mi--p---- 347 (872)
.+.+++++++... ..+++++|++..+.|++|.+.|++. .+.|+++|+++++|.+|..|. ... .
T Consensus 162 -----~d~~~le~~l~~~----~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~ 232 (407)
T PRK09064 162 -----NDVAHLEELLAAA----DPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAER 232 (407)
T ss_pred -----CCHHHHHHHHHhc----cCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHh
Confidence 2568888887531 1135899999999999999999985 567899999999999997442 000 0
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
.++. -.+|+++.++.|.||. .| |+++.+++.++.+
T Consensus 233 ~~~~-~~~div~~t~sKa~g~--~G-G~~~~~~~~~~~l 267 (407)
T PRK09064 233 DGLM-DRIDIIEGTLAKAFGV--MG-GYIAGSAALVDAV 267 (407)
T ss_pred cCCC-CCCeEEEEecchhhhc--cC-ceEecCHHHHHHH
Confidence 1221 2579999999999984 46 7776666655544
No 190
>PLN02822 serine palmitoyltransferase
Probab=98.93 E-value=2.8e-08 Score=114.67 Aligned_cols=173 Identities=13% Similarity=0.158 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
+...+++++||++++.. + .|+||+|.+ ++..++.++. ++||.|+.. ...|.++..-. .-.|.++++++.+
T Consensus 154 ~~~~~Lee~La~~~~~~-~--~i~~s~G~~-a~~sai~a~~-~~gd~Ii~d-~~~H~s~~~~~---~ls~~~~~~~~~n- 223 (481)
T PLN02822 154 DVHLDCETKIAKFLGTP-D--SILYSYGLS-TIFSVIPAFC-KKGDIIVAD-EGVHWGIQNGL---YLSRSTIVYFKHN- 223 (481)
T ss_pred HHHHHHHHHHHHHhCCC-C--EEEECCHHH-HHHHHHHHhC-CCCCEEEEe-CCccHHHHHHH---HHcCCeEEEECCC-
Confidence 56789999999999974 2 599998877 5666777774 678887755 34566664322 2246788877643
Q ss_pred CCCccCHHHHHHHHhhhhcc-CCCCCc-eEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCC---C--C--c
Q 002866 277 PTLKLCSTDLRKQISSKKRR-KKDSAA-GLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPK---D--M--D 346 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr-~~~~~T-~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~---~--m--i 346 (872)
+.++++..+....+. ...+++ ++|++..+.+.+|.+.|++ +++.|+++|+.+++|-++..|. . . .
T Consensus 224 -----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e 298 (481)
T PLN02822 224 -----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSE 298 (481)
T ss_pred -----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHH
Confidence 356666655432110 001234 7999999999999999997 4567899999999999987442 0 0 0
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.+++....+|+++.|+.|-|| +.| |+++.+++.++.++
T Consensus 299 ~~~v~~~~~dii~~s~sKalg--~~G-G~i~g~~~ii~~~~ 336 (481)
T PLN02822 299 HFGVPIEKIDIITAAMGHALA--TEG-GFCTGSARVVDHQR 336 (481)
T ss_pred HcCCCCCCCeEEEecchhhhh--hCC-eEEEcCHHHHHHHH
Confidence 134433478999999999998 567 88887777766554
No 191
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=98.92 E-value=2e-08 Score=111.13 Aligned_cols=218 Identities=11% Similarity=0.084 Sum_probs=137.4
Q ss_pred CCceecccCC------CCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc-hHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCG------FGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE-KGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAA------tgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps-S~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++.-|+|.++ .+..++.+++++.+ .+.. . ..+..+. ......++.++++++++.+.+ .|+
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~-------~~~~-~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~ 100 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKE-------QLAK-L---THFSLGFFYNEPAVELAELLLALTPEGLD--KVF 100 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHH-------HHHh-C---cCccCcccCCHHHHHHHHHHHHhCCCCCC--EEE
Confidence 4567888765 33356777776533 1211 1 1232221 135677899999999997555 599
Q ss_pred EeCCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHHHHc---------CcEEEEEeccCC-----CCccCHHH
Q 002866 221 FTVSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSAKEK---------GAKVYSAWFKWP-----TLKLCSTD 285 (872)
Q Consensus 221 FTsnATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~Akrk---------GaeV~~Vpvd~p-----~g~Id~ed 285 (872)
||.++|+|+..++..+ .+..++.|++....-|.+........... +..+..+|.+.+ ....+.++
T Consensus 101 ~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 180 (413)
T cd00610 101 FVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEA 180 (413)
T ss_pred EcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHH
Confidence 9999999999887764 34567787765433355444433222111 223555554421 01225677
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeeccccC-CCC--CccCCCCCCCCcE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSLG-PKD--MDSLGLSLFRPDF 357 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~a-G~~--mipLDLs~l~~DF 357 (872)
|++++... ..++++|++..+.+.+|.+.| ++ +++.|+++|+++++|-++.. |.. ...++.....+|+
T Consensus 181 l~~~l~~~-----~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~ 255 (413)
T cd00610 181 LEEALEEH-----PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDI 255 (413)
T ss_pred HHHHHhcC-----CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCe
Confidence 77777532 125789999999999999998 76 45678999999999999753 110 0122333456898
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 358 IITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 358 lv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
+++| |++|. +..+|+++.++++++.+
T Consensus 256 ~t~s--K~l~~-g~~~g~~~~~~~~~~~~ 281 (413)
T cd00610 256 VTLG--KGLGG-GLPLGAVLGREEIMDAF 281 (413)
T ss_pred EEEc--ccccC-ccccEEEEEcHHHHHhh
Confidence 8776 99885 45589999888776654
No 192
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=98.90 E-value=3e-08 Score=110.46 Aligned_cols=163 Identities=12% Similarity=0.099 Sum_probs=116.8
Q ss_pred HHHHHHHHHhcC-----CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec
Q 002866 200 HDIKTRIMDHLN-----IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 200 eeARerIA~lLg-----A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv 274 (872)
.+.|++||++++ ++++ .|++|+|+|+|+.+++..+. ++|+.|++.. +....+...++..|+++..+++
T Consensus 76 ~~lr~aia~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l~-~~gd~v~i~~----P~y~~~~~~~~~~g~~v~~~~~ 148 (401)
T TIGR01264 76 LSAREAIASYYHNPDGPIEAD--DVVLCSGCSHAIEMCIAALA-NAGQNILVPR----PGFPLYETLAESMGIEVKLYNL 148 (401)
T ss_pred HHHHHHHHHHHhhcCCCCCHH--HEEECcChHHHHHHHHHHhC-CCCCEEEEeC----CCChhHHHHHHHcCCEEEEeec
Confidence 468999999997 6665 59999999999999999874 6889887652 1222345567788999999887
Q ss_pred cCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc--C--CCCC
Q 002866 275 KWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL--G--PKDM 345 (872)
Q Consensus 275 d~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~--a--G~~m 345 (872)
+.. +..++.+.|++.+.. +++++.++.-+|.||+.++.+ +++.|+++|+++++|-+-. . +.
T Consensus 149 ~~~~~~~~d~~~l~~~~~~--------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-- 218 (401)
T TIGR01264 149 LPDKSWEIDLKQLESLIDE--------KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA-- 218 (401)
T ss_pred CCccCCCCCHHHHHHHhcc--------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc--
Confidence 532 356888999877642 478899999999999999864 3466789999999999832 1 11
Q ss_pred ccCCCCCCCC---cEEEEcccccCCCCCCceEEEEEe
Q 002866 346 DSLGLSLFRP---DFIITSFYRVFGFDPTGFGCLLIK 379 (872)
Q Consensus 346 ipLDLs~l~~---DFlv~S~HK~fG~~PtGvG~LyVR 379 (872)
....+..+.. =+++.|+=|.||.+=..+|++++.
T Consensus 219 ~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~ 255 (401)
T TIGR01264 219 TFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIH 255 (401)
T ss_pred ccccHHHcCCCCcEEEEccCcccCCCccceEEEEEec
Confidence 1122222222 267899999877521227777754
No 193
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=98.90 E-value=4e-08 Score=112.23 Aligned_cols=218 Identities=15% Similarity=0.124 Sum_probs=142.3
Q ss_pred HHHHhhcccCC--C-CceecccCCC---CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc
Q 002866 137 DQLRANEYLHL--S-PKVCLDYCGF---GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL 210 (872)
Q Consensus 137 D~lR~~EFP~L--~-~~IYLDyAAt---gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL 210 (872)
..+++.-|..+ . +.+|+|.-.= +.++..|..+++. . ...|+... -+.+.|+.|++++
T Consensus 4 ~~l~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~-----------g---d~~Y~~~~---g~~~Leeaia~~~ 66 (431)
T cd00617 4 RALKEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMML-----------G---DEAYAGSK---SFYDLEDAVQDLF 66 (431)
T ss_pred HHHHHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHh-----------C---CCccCCCC---CHHHHHHHHHHHH
Confidence 34555555433 2 3677776443 4566666555321 1 12354322 2457899999999
Q ss_pred CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC---------CCcc
Q 002866 211 NIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP---------TLKL 281 (872)
Q Consensus 211 gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p---------~g~I 281 (872)
|.+ .+++|+++|+|+.++...+ .++||.|+...-+. +. .......|++++.++++.. .+.+
T Consensus 67 g~~----~vv~t~~Gt~Al~la~~al-~~pGD~V~~~~~f~--~~---~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gni 136 (431)
T cd00617 67 GFK----HIIPTHQGRGAENILFSIL-LKPGRTVPSNMHFD--TT---RGHIEANGAVPVDLVIDEAHDAQELIPFKGNI 136 (431)
T ss_pred CCC----eEEEcCCHHHHHHHHHHHh-CCCCCEEccCCccc--ch---HHHHHhCCCEeEEEecccccccccccCCCCCc
Confidence 984 3999999999999988877 57899775321111 11 1223457999999988632 3558
Q ss_pred CHHHHHHHHhhhhccCCCCCceEEEEeCccCcc-cchhcHHH----HHHHHHCCcEEEeeccccCCCC---------Ccc
Q 002866 282 CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVT-GAKYSYQW----MALAQQNHWHVLLDAGSLGPKD---------MDS 347 (872)
Q Consensus 282 d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvT-G~i~PLe~----I~~Are~G~~VLVDAAQ~aG~~---------mip 347 (872)
|.++|+++|..+ ...++++|++..-+|.+ |+..+.+. .+.|+++|++++.|+|+++... --.
T Consensus 137 D~e~Le~~I~~~----~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~ 212 (431)
T cd00617 137 DVAKLEKLIDEV----GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRD 212 (431)
T ss_pred CHHHHHHHhCcc----cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccC
Confidence 999999999742 12358899999999987 99998763 3567999999999999875310 001
Q ss_pred CCCCC------CCCcEEEEcccccCCCCCCceEEEEEeC-CCccccc
Q 002866 348 LGLSL------FRPDFIITSFYRVFGFDPTGFGCLLIKK-SVMGSLQ 387 (872)
Q Consensus 348 LDLs~------l~~DFlv~S~HK~fG~~PtGvG~LyVRk-~~i~~L~ 387 (872)
..+.+ ...|.+++|+||-++. |. -|++..+. +++..++
T Consensus 213 ~si~ei~~e~~s~sd~~~mS~~K~~~~-~~-GG~i~~~d~~l~~~~~ 257 (431)
T cd00617 213 KSIAEIAREMFSYADGCTMSAKKDGLV-NI-GGFLALRDDELYEEAR 257 (431)
T ss_pred CCHHHHHHHhhccCCEEEEEeecCCCC-cc-ceEEEeCcHHHHHHHH
Confidence 11111 1489999999997776 33 23566665 3666555
No 194
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=98.89 E-value=3.3e-08 Score=110.90 Aligned_cols=164 Identities=11% Similarity=0.114 Sum_probs=115.0
Q ss_pred HHHHHHHHHhcC------------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCc
Q 002866 200 HDIKTRIMDHLN------------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGA 267 (872)
Q Consensus 200 eeARerIA~lLg------------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGa 267 (872)
.+.|+.||++++ ++++ .|++|+|+++|+.+++..+ .++||+|++..- .+. .+...++..|+
T Consensus 78 ~~Lr~aia~~~~~~~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~P-~y~---~~~~~~~~~g~ 150 (412)
T PTZ00433 78 PEAREAVATYWRNSFVHKESLKSTIKKD--NVVLCSGVSHAILMALTAL-CDEGDNILVPAP-GFP---HYETVCKAYGI 150 (412)
T ss_pred HHHHHHHHHHHHhhccccccccCCCChh--hEEEeCChHHHHHHHHHHh-cCCCCEEEEccC-Ccc---cHHHHHHHcCC
Confidence 468999999886 4555 5999999999999999987 478999876532 122 23445677899
Q ss_pred EEEEEeccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc--
Q 002866 268 KVYSAWFKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL-- 340 (872)
Q Consensus 268 eV~~Vpvd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~-- 340 (872)
++..+|++.. +..++.++|++.+.. +++++.+++-+|.||..++.+ +++.|+++|+++++|-+-.
T Consensus 151 ~~~~i~~~~~~~~~~d~~~l~~~~~~--------~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~ 222 (412)
T PTZ00433 151 EMRFYNCRPEKDWEADLDEIRRLVDD--------RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGM 222 (412)
T ss_pred EEEEEecCccccCcCCHHHHHHHhcc--------CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccccc
Confidence 9999998532 346788988877642 478899999999999999964 2456789999999999842
Q ss_pred C--CCCCcc-CCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 002866 341 G--PKDMDS-LGLSLFRPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 341 a--G~~mip-LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
. +....+ ..+.....=.++.|+=|.||.+=..+|.+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 223 VFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLL 263 (412)
T ss_pred ccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEE
Confidence 1 110000 1111111226778999988752234777775
No 195
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=98.89 E-value=2.1e-08 Score=112.10 Aligned_cols=166 Identities=16% Similarity=0.143 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
...+.+++||+++|.+ + .|+|++| ++|+..++..+. ..+|+.|++. ..+|.+.. ..++..|+++..++.+
T Consensus 92 ~~~~Le~~la~~~g~~-~--~i~~~sG-~~a~~~~i~~l~~~~~g~~vi~~-~~~h~s~~---~~~~~~g~~~~~~~~~- 162 (410)
T PRK13392 92 PHVLLERELADLHGKE-S--ALLFTSG-YVSNDAALSTLGKLLPGCVILSD-ALNHASMI---EGIRRSGAEKQVFRHN- 162 (410)
T ss_pred HHHHHHHHHHHHhCCC-C--EEEECcH-HHHHHHHHHHHhcCCCCCEEEEe-hhhhHHHH---HHHHHcCCeEEEEeCC-
Confidence 4568899999999963 2 5777776 555555554432 2467766654 33566553 2345678888776532
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCcc--------
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDS-------- 347 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mip-------- 347 (872)
+.+++++.+... ..++|++|++.+.+|+||.+.|++. ...|+++++++++|.++..|.- .+
T Consensus 163 -----d~~~l~~~l~~~----~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~-g~~g~g~~~~ 232 (410)
T PRK13392 163 -----DLADLEEQLASV----DPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLY-GARGGGIAER 232 (410)
T ss_pred -----CHHHHHHHHHhc----cCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCc-CCCCCchhhh
Confidence 456676666532 2246899999999999999999975 5678999999999999885420 01
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
.++. -++|+++.|+.|.||. | | |++..+++.++.+
T Consensus 233 ~~~~-~~~div~~tlsK~~g~-~-G-G~~~~~~~~~~~l 267 (410)
T PRK13392 233 DGLM-DRIDMIQGTLAKAFGC-L-G-GYIAASADLIDFV 267 (410)
T ss_pred ccCC-CCCcEEEEEChHhhhc-c-c-chhhcCHHHHHHH
Confidence 0111 2578999999999996 3 4 6665565555443
No 196
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=98.88 E-value=7.9e-08 Score=107.57 Aligned_cols=206 Identities=14% Similarity=0.050 Sum_probs=126.9
Q ss_pred ceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCc-CcCCC-chHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHH
Q 002866 150 KVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHA-LYGGA-EKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRG 226 (872)
Q Consensus 150 ~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~-~ygNp-sS~~~ieeARerIA~lLgA~~dEY~VVFTsnAT 226 (872)
..|..|...++ ..+.+++++.+ .+. ...... ...+. .......+..+++|+++|++ ..++|++|+
T Consensus 48 ~~~~sn~ylgl~~~p~v~~a~~~-------~~~-~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~---~~~~~~SG~- 115 (406)
T PRK13393 48 TVWCSNDYLGMGQHPAVLAAMHE-------ALD-TCGAGAGGTRNISGTNHYHVLLEAELADLHGKE---AALLFTSGY- 115 (406)
T ss_pred EEeecccccCCCCCHHHHHHHHH-------HHH-HcCCCCcccccccCChHHHHHHHHHHHHHhCCC---cEEEeCCcH-
Confidence 45777777787 45667777543 121 110000 00000 01245678999999999973 246666665
Q ss_pred HHHHHHHhhCCC-CCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEE
Q 002866 227 SAFKLLAESYPF-HTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLF 305 (872)
Q Consensus 227 eALnLVaeslpf-~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LV 305 (872)
+|+..+...+.. .+|+.|++. +.+|.++.... +..|+++..++. .+.+++++++... ...++++|
T Consensus 116 ~An~~ai~~l~~~~~g~~I~~~-~~~H~s~~~~~---~~~g~~~~~~~~------~d~~~l~~~l~~~----~~~~~~~v 181 (406)
T PRK13393 116 VSNWAALSTLGSRLPGCVILSD-ELNHASMIEGI---RHSRAEKRIFRH------NDPADLERKLSDL----DPHRPKLV 181 (406)
T ss_pred HHHHHHHHHhhcCCCCCEEEEc-cchhHHHHHHH---HHcCCeEEEeCC------CCHHHHHHHHHhc----cCCCCEEE
Confidence 566655554432 256655554 45677765433 335777776653 2567788777532 12357899
Q ss_pred EEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccC--------CCCCCCCcEEEEcccccCCCCCCceEEE
Q 002866 306 VFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSL--------GLSLFRPDFIITSFYRVFGFDPTGFGCL 376 (872)
Q Consensus 306 a~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipL--------DLs~l~~DFlv~S~HK~fG~~PtGvG~L 376 (872)
++.+++|++|.++|++. .+.|+++|+.+++|.+|..|. .-+. ++. -.+|.++.++=|.||. .| |++
T Consensus 182 ~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~-~g~~G~g~~~~~~~~-~~~~i~~~tlsKa~g~--~G-G~~ 256 (406)
T PRK13393 182 AFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGL-YGPRGGGIAEREGLA-DRLTIIEGTLAKAFGV--MG-GYI 256 (406)
T ss_pred EEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccc-cCCCCCchhhhcCCC-CCCeEEEEeCchhhcc--cC-cee
Confidence 99999999999999985 567899999999999997543 0011 111 1368888899999884 24 555
Q ss_pred EEeCCCcccc
Q 002866 377 LIKKSVMGSL 386 (872)
Q Consensus 377 yVRk~~i~~L 386 (872)
..+++.++.+
T Consensus 257 ~~~~~~~~~l 266 (406)
T PRK13393 257 TGSAALCDFI 266 (406)
T ss_pred eCCHHHHHHH
Confidence 5455544443
No 197
>PRK06290 aspartate aminotransferase; Provisional
Probab=98.87 E-value=3.3e-08 Score=111.54 Aligned_cols=170 Identities=16% Similarity=0.183 Sum_probs=120.0
Q ss_pred HHHHHHHHHhc----C---CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 200 HDIKTRIMDHL----N---IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 200 eeARerIA~lL----g---A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
...|+.||+++ | +++++ .|++|+|+++|+.+++..+. .+|+.|++..- +.......++..|+++..+
T Consensus 84 ~~lr~aia~~~~~~~g~~~~~~~~-~I~it~Gs~~al~~~~~~~~-~~gd~Vlv~~P----~y~~~~~~~~~~g~~v~~v 157 (410)
T PRK06290 84 QEFKEAAARYMEKVFGVKDIDPVT-EVIHSIGSKPALAMLPSCFI-NPGDVTLMTVP----GYPVTGTHTKYYGGEVYNL 157 (410)
T ss_pred HHHHHHHHHHHHHHcCCCcCCCcc-eEEEccCHHHHHHHHHHHhC-CCCCEEEEeCC----CCccHHHHHHHcCCEEEEE
Confidence 46788888875 4 44532 59999999999999998874 78999876531 2222344567789999999
Q ss_pred eccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC----CC
Q 002866 273 WFKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG----PK 343 (872)
Q Consensus 273 pvd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a----G~ 343 (872)
|++.. ...++.+++++.+.. +++++.++.-+|.||+++|.+ ++..|+++++++++|-+-.- +.
T Consensus 158 ~~~~~~~~~~d~~~l~~~~~~--------~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~ 229 (410)
T PRK06290 158 PLLEENNFLPDLDSIPKDIKE--------KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK 229 (410)
T ss_pred ecCCCcCCcCCHHHHHHhhcc--------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC
Confidence 98743 244678888776642 478888887899999999974 34667899999999998431 11
Q ss_pred CCcc-CCCCC-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccc
Q 002866 344 DMDS-LGLSL-FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSL 386 (872)
Q Consensus 344 ~mip-LDLs~-l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L 386 (872)
..+ +.+.. .+.+.++.|+=|.||. .| +|+++..+..+..+
T Consensus 230 -~~s~~~~~~~~~~~I~i~SfSK~~g~--~GlRiG~ii~~~~l~~~l 273 (410)
T PRK06290 230 -PLSFLSVPGAKEVGVEIHSLSKAYNM--TGWRLAFVVGNELIVKAF 273 (410)
T ss_pred -CcChhcCCCccccEEEEeechhhcCC--chhheEeEEeCHHHHHHH
Confidence 011 12221 2467999999999984 36 79888766655444
No 198
>PLN02656 tyrosine transaminase
Probab=98.87 E-value=4.5e-08 Score=109.86 Aligned_cols=165 Identities=12% Similarity=0.038 Sum_probs=113.9
Q ss_pred HHHHHHHHHhcC------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHLN------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lLg------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.|+++++ ++++ +|++|+|+|+|+.+++..+ .++||+|++.. ..+... ...++..|+++..++
T Consensus 76 ~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~-p~y~~~---~~~~~~~g~~~~~i~ 148 (409)
T PLN02656 76 PQARRAIAEYLSRDLPYKLSLD--DVFITSGCTQAIDVALSML-ARPGANILLPR-PGFPIY---ELCAAFRHLEVRYVD 148 (409)
T ss_pred HHHHHHHHHHHHHhcCCCCCcc--cEEEeCChHHHHHHHHHHH-hCCCCeEEEeC-CCCCcH---HHHHHHcCCEEEEEe
Confidence 468888888874 4554 5999999999999999887 47899987653 223322 233455799999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc--C--CCC
Q 002866 274 FKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL--G--PKD 344 (872)
Q Consensus 274 vd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~--a--G~~ 344 (872)
++.. +..++.+++++++.. +++++.+++-+|.||.+++.+ ++..|+++++++++|.+-. . +..
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~ 220 (409)
T PLN02656 149 LLPEKGWEVDLDAVEALADQ--------NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNP 220 (409)
T ss_pred CCCcCCCCCCHHHHHHHhcc--------CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCC
Confidence 8532 346888998877742 478899999999999998764 3567799999999999932 1 210
Q ss_pred CccC-CCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 002866 345 MDSL-GLSLFRPDFIITSFYRVFGFDPTGFGCLLIK 379 (872)
Q Consensus 345 mipL-DLs~l~~DFlv~S~HK~fG~~PtGvG~LyVR 379 (872)
..++ .+.....=+++.|+=|.|+.+=--+|+++..
T Consensus 221 ~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~ 256 (409)
T PLN02656 221 FVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTT 256 (409)
T ss_pred cccHHHhcccCcEEEEcccchhccCcceeEEEEEEe
Confidence 0111 0111122367888999877521337777653
No 199
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=98.86 E-value=6.2e-08 Score=107.23 Aligned_cols=205 Identities=12% Similarity=0.150 Sum_probs=133.0
Q ss_pred ceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 150 KVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
.+.|+-+-... .|+.+++++.+ .. ..+ ..|+.+. ..+.|++||++++++++ +|++|+|++++
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~-------~~-~~~---~~Y~~~~----~~~Lr~~ia~~~~~~~~--~I~it~G~~~~ 96 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMRE-------AA-AEI---WKYGDPE----NHDLRHALAAHHGVAPE--NIMVGEGIDGL 96 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHH-------HH-HHh---hcCCCCc----cHHHHHHHHHHhCCCHH--HEEEcCCHHHH
Confidence 45777664443 45667776432 11 111 2355443 45899999999999876 59999999999
Q ss_pred HHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEe
Q 002866 229 FKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFP 308 (872)
Q Consensus 229 LnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p 308 (872)
+.++...+ .++|+.|++..- .+... ...++..|+++..+|++.. .++.+++.+.+.. .+++++.++
T Consensus 97 l~~~~~~~-~~~gd~vlv~~p-~y~~~---~~~~~~~g~~~~~vp~~~~--~~~~~~l~~~~~~-------~~~~~i~l~ 162 (369)
T PRK08153 97 LGLIVRLY-VEPGDPVVTSLG-AYPTF---NYHVAGFGGRLVTVPYRDD--REDLDALLDAARR-------ENAPLVYLA 162 (369)
T ss_pred HHHHHHHh-cCCCCEEEECCC-cchHH---HHHHHHcCCeEEEeeCCCC--CCCHHHHHHHhcc-------cCCcEEEEe
Confidence 99999876 368998887521 22222 2334557999999998642 3677777655532 357899888
Q ss_pred CccCcccchhcHHHH-HHHH--HCCcEEEeecccc-CCCCCccCCCCC-CCCcEEEEcccccCCCCCCc--eEEEEEeCC
Q 002866 309 VQSRVTGAKYSYQWM-ALAQ--QNHWHVLLDAGSL-GPKDMDSLGLSL-FRPDFIITSFYRVFGFDPTG--FGCLLIKKS 381 (872)
Q Consensus 309 ~vSNvTG~i~PLe~I-~~Ar--e~G~~VLVDAAQ~-aG~~mipLDLs~-l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~ 381 (872)
.-+|.||+++|.+.+ ..++ ++++++++|-+-. ...+-....+.. .+--+++.|+=|.||. .| +|+++..++
T Consensus 163 ~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~--~GlRiG~~v~~~~ 240 (369)
T PRK08153 163 NPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGL--AGARVGYAIGAPG 240 (369)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccC--cchheeeeecCHH
Confidence 899999999999743 3332 3488999999832 111000111221 2223778999999984 26 688887766
Q ss_pred Cccccc
Q 002866 382 VMGSLQ 387 (872)
Q Consensus 382 ~i~~L~ 387 (872)
.++.+.
T Consensus 241 ~~~~l~ 246 (369)
T PRK08153 241 TIKAFD 246 (369)
T ss_pred HHHHHH
Confidence 655443
No 200
>PLN02187 rooty/superroot1
Probab=98.86 E-value=5.1e-08 Score=111.88 Aligned_cols=163 Identities=13% Similarity=0.099 Sum_probs=115.3
Q ss_pred HHHHHHHHHHhcC------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHLN------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lLg------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
....|+.||++++ ++++ +|++|+|+++|+.+++.++ .++||+|++..- ........++..|++++.+
T Consensus 110 ~~~lR~aiA~~~~~~~~~~~~~~--~I~it~G~~~al~~~~~~l-~~pGd~Vlv~~P----~y~~y~~~~~~~g~~~~~~ 182 (462)
T PLN02187 110 ILPARRAVADYMNRDLPHKLTPE--DIFLTAGCNQGIEIVFESL-ARPNANILLPRP----GFPHYDARAAYSGLEVRKF 182 (462)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcc--cEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCC----CCccHHHHHHHcCCEEEEE
Confidence 4579999999984 5665 5999999999999999988 578999876521 1222334567789999999
Q ss_pred eccC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc----CCC
Q 002866 273 WFKW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL----GPK 343 (872)
Q Consensus 273 pvd~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~----aG~ 343 (872)
+... .+..++.++|++++.. +++++.++.-+|.||.+++.+ ++..|+++|++|++|-+-. .+.
T Consensus 183 ~l~~~~~~~~d~~~l~~~~~~--------~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~ 254 (462)
T PLN02187 183 DLLPEKEWEIDLEGIEAIADE--------NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN 254 (462)
T ss_pred eCccccCCccCHHHHHHhcCC--------CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC
Confidence 8742 2356788999876642 578899999999999999964 3456789999999999832 121
Q ss_pred CCccCCCCCCC---CcEEEEcccccCCCCCCceEEEEE
Q 002866 344 DMDSLGLSLFR---PDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 344 ~mipLDLs~l~---~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
. ...+..+. .=+++.|+=|.|+.+=--+|.+++
T Consensus 255 ~--~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~ 290 (462)
T PLN02187 255 P--FVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIAL 290 (462)
T ss_pred C--ceeHHHhccCCcEEEEecchhhcCCccceeEEEEe
Confidence 0 11222221 236778999988852122677765
No 201
>PRK07049 methionine gamma-lyase; Validated
Probab=98.86 E-value=6.2e-08 Score=110.33 Aligned_cols=177 Identities=12% Similarity=0.105 Sum_probs=121.3
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHH-HHHHHHcCc
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWM-AQSAKEKGA 267 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~-~~~AkrkGa 267 (872)
.|+||.. ...+++||++.|++ .+++|+|+++|+.++..++ .++||+|++.... +...... ...++..|+
T Consensus 79 R~~~Pt~----~~Le~~lA~leg~~----~~iv~~sG~~Ai~~~l~al-~~~Gd~Vv~~~p~-Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 79 RFNHPNS----EIVEDRLAVYEGAE----SAALFSSGMSAIATTLLAF-VRPGDVILHSQPL-YGGTETLLAKTFRNFGV 148 (427)
T ss_pred CCCCcCH----HHHHHHHHHHhCCC----cEEEEccHHHHHHHHHHHH-hCCCCEEEEcCCC-cccHHHHHHHHHHhcCc
Confidence 4677763 47888999999864 2777888889999888876 4689998865431 2223222 344567899
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHH------CCcEEEeecccc
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQ------NHWHVLLDAGSL 340 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are------~G~~VLVDAAQ~ 340 (872)
++..++. ..+.+++++.|.... ..+++++|.+...+|.||.++|++.+ ..++. +++.+++|-+-+
T Consensus 149 ~~v~~~~-----~~d~~~l~~~l~~~~---~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~ 220 (427)
T PRK07049 149 GAVGFAD-----GLSEAAIGAAAEAAA---AKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLL 220 (427)
T ss_pred EEEEEeC-----CCCHHHHHHHHHhhc---cCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcc
Confidence 8665542 135677877775321 12368999999999999999999854 45555 799999999833
Q ss_pred CCCCCccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 341 GPKDMDSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 341 aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
.+....++ ..++|.++.|+-|.||+ ..| +|+++.++++++.+.
T Consensus 221 ~~~~~~pl---~~g~divv~S~SK~~gG-~~glr~G~vv~~~~l~~~l~ 265 (427)
T PRK07049 221 GPVFQKPL---EHGADLSVYSLTKYVGG-HSDLVAGAVLGRKALIRQVR 265 (427)
T ss_pred ccccCCcc---ccCCCEEEEcCceeecC-CCCcEEEEEECCHHHHHHHH
Confidence 33211133 35789999999999985 233 677776666555554
No 202
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=98.85 E-value=3.7e-08 Score=108.94 Aligned_cols=181 Identities=13% Similarity=0.150 Sum_probs=123.3
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCC-CeEEEecccCchhHHHHHHHHHHcCc
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTN-KKLLTMFDYESQSVNWMAQSAKEKGA 267 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~G-d~ILT~~DhEHnSVl~~~~~AkrkGa 267 (872)
.|..+. ..+.|+.||+++|++++ +|++|+|+++++.+++..+. .+| +.|++..- ........++..|+
T Consensus 55 ~Y~~~~----~~~lr~~ia~~~~~~~~--~I~~t~G~~~~l~~~~~~~~-~~g~~~vlv~~p----~y~~~~~~~~~~g~ 123 (364)
T PRK04781 55 RYPDPQ----PPGLRSALAALYGCAPE--QLLIGRGSDEAIDLLVRALC-VPGRDAVLVTPP----VFGMYAVCARLQNA 123 (364)
T ss_pred cCCCCC----HHHHHHHHHHHhCcChH--HEEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCC----ChHHHHHHHHHcCC
Confidence 355553 35899999999999876 59999999999999999873 567 67765521 22233445567899
Q ss_pred EEEEEeccCC--CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHH--HCCcEEEeeccc--c
Q 002866 268 KVYSAWFKWP--TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQ--QNHWHVLLDAGS--L 340 (872)
Q Consensus 268 eV~~Vpvd~p--~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Ar--e~G~~VLVDAAQ--~ 340 (872)
++..+|.+.+ +..++.+++.+.+. .++++++.++..+|.||.++|.+.+ ..++ +++++|++|.+- +
T Consensus 124 ~~~~v~~~~~~~~~~~d~~~l~~~~~-------~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f 196 (364)
T PRK04781 124 PLVEVPLVDGADGFHADVPAIVAAAL-------ASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEF 196 (364)
T ss_pred EEEEEecCCCccCCCcCHHHHHHHHh-------ccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhh
Confidence 9999997421 23456777655442 1358999999999999999999744 3333 247889999983 2
Q ss_pred CCCCCccCCC-CCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 341 GPKDMDSLGL-SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 341 aG~~mipLDL-s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
.... ..+.+ ...+-=+++.||=|.||-+=--+|.++..++.++.+..
T Consensus 197 ~~~~-~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~ 244 (364)
T PRK04781 197 SDVP-SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRR 244 (364)
T ss_pred cCCc-chHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHh
Confidence 3210 11111 12222378899999998311337999988887776653
No 203
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.85 E-value=8.8e-07 Score=108.95 Aligned_cols=166 Identities=14% Similarity=0.125 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCC--CCCeEEEecccCchhH-HHHHHHHHHcCcEEEEE
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFH--TNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~--~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~V 272 (872)
.+.+-+-+..|+++.|.+... ..+..++|.+...++.++... ++++|++. +..|+.. .-+..+++..|++|+.+
T Consensus 108 Le~l~e~Qt~i~eLtGm~~aN--aSl~d~atA~aEa~~~a~~~~~~~~~~vlv~-~~~hP~~~~v~~t~a~~~g~~v~~~ 184 (939)
T TIGR00461 108 LEALLNFQTVVSDLTGLPVAN--ASLLDEGTAAAEAMALSFNVSKKKANKFFVA-KDLHPQTKSVLHTRAKPFGIEVIVV 184 (939)
T ss_pred HHHHHHHHHHHHHHHCCChhh--hhccchhhHHHHHHHHHHHhhcCCCCEEEEC-CCCCcchHHHHHHHHHhcCcEEEEE
Confidence 367888999999999998653 667789999888777665433 34667665 3344544 34556788899999876
Q ss_pred eccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCC
Q 002866 273 WFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLS 351 (872)
Q Consensus 273 pvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs 351 (872)
+ .++|+..+ ++. .++-...|..|.+.+++ +++.+|++|+++++++-..+.. +.....
T Consensus 185 ~---------~~~l~~~~----------~~~-~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~--ll~~Pg 242 (939)
T TIGR00461 185 D---------CSDIKKAV----------DVF-GCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALT--LLTPPG 242 (939)
T ss_pred c---------HHHHhhcC----------CEE-EEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhC--CcCCHH
Confidence 3 23343222 232 33334559999999997 5578899999999977765543 456677
Q ss_pred CCCCcEEEEccccc-----CCCCCCceEEEEEeCCCcccccC
Q 002866 352 LFRPDFIITSFYRV-----FGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 352 ~l~~DFlv~S~HK~-----fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
++++|+++.+.++| ||+ | +.|++.+|+.....|..
T Consensus 243 e~GaDi~vg~~q~fg~p~g~GG-P-~aG~~a~~~~l~r~lPg 282 (939)
T TIGR00461 243 HYGADIVLGSSQRFGVPMGYGG-P-HAAFFAVKDEYNRKMPG 282 (939)
T ss_pred HcCCcEEeeCCCccCCCCCCCC-C-ceeeeeecHhhHhhCCC
Confidence 89999999988887 666 5 69999999987776654
No 204
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.85 E-value=6e-08 Score=110.07 Aligned_cols=203 Identities=11% Similarity=0.026 Sum_probs=130.6
Q ss_pred CceecccCCCC-----CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCC------CCCCC
Q 002866 149 PKVCLDYCGFG-----LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNI------PENEY 217 (872)
Q Consensus 149 ~~IYLDyAAtg-----p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA------~~dEY 217 (872)
+.|.|..+--+ +.|+.+.+++.+ .+... ....|+.+ .-+.++|+.||++++. +++
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~-------al~~~--~~~~Y~~~---~G~~~lr~aia~~~~~~~~~~~~~~-- 118 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAA-------ALRSG--KYNSYSTC---VGLLPARRAIAEYLSRDLPYELSTD-- 118 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHH-------HHHcC--cCCCCCCC---ccCHHHHHHHHHHHhhccCCCCChh--
Confidence 47888887443 234566665432 11111 01124332 2345799999999853 444
Q ss_pred cEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-CCCccCHHHHHHHHhhhhcc
Q 002866 218 GLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW-PTLKLCSTDLRKQISSKKRR 296 (872)
Q Consensus 218 ~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~-p~g~Id~edLe~~I~~~~rr 296 (872)
+|++|+|+|+|+.+++..+ ..+||+|++..- .+. .+...+...|++++.+++.. .+..++.++|++++..
T Consensus 119 ~v~it~G~~~al~l~~~~l-~~~Gd~Vlv~~P-~y~---~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 189 (430)
T PLN00145 119 DIYLTAGCAQAIEIIMSVL-AQPGANILLPRP-GYP---LYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE---- 189 (430)
T ss_pred hEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCC-CCc---cHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc----
Confidence 5999999999999999988 478999876532 112 22334556799999888642 2456899999887743
Q ss_pred CCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc--C--CCCCccC-CCCCCCCcEEEEcccccCC
Q 002866 297 KKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL--G--PKDMDSL-GLSLFRPDFIITSFYRVFG 367 (872)
Q Consensus 297 ~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~--a--G~~mipL-DLs~l~~DFlv~S~HK~fG 367 (872)
+|+++.+.+-+|.||.++|.+ +++.|+++|++|++|.+-. . +....++ .+.....=+++.|+=|.|+
T Consensus 190 ----~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 265 (430)
T PLN00145 190 ----NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWV 265 (430)
T ss_pred ----CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccC
Confidence 588999999999999999954 3466789999999999832 1 1100111 1122223477888888877
Q ss_pred CCCCceEEEEE
Q 002866 368 FDPTGFGCLLI 378 (872)
Q Consensus 368 ~~PtGvG~LyV 378 (872)
.+=--+|.+++
T Consensus 266 ~pG~RlG~iv~ 276 (430)
T PLN00145 266 VPGWRLGWIAT 276 (430)
T ss_pred CCCeeEEEEEE
Confidence 42122666665
No 205
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=98.83 E-value=1.1e-07 Score=104.26 Aligned_cols=205 Identities=13% Similarity=0.152 Sum_probs=129.9
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
..+.|+.+.... +|+.+++++.+ .+ ..+ ..|..+. ....|+.||++++++++ +|++|+|+++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~-------~~-~~~---~~Y~~~~----~~~lr~~ia~~~~~~~~--~I~it~G~~~ 93 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIRE-------AA-ERV---HSYPKAS----HADLTAALADRWDVSPE--QVWLANGGDG 93 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHH-------HH-hhh---hcCCCCC----HHHHHHHHHHHhCCCcc--eEEECCCHHH
Confidence 367887764443 44555555322 11 111 1344332 35799999999999887 4999999999
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHHHhhhhccCCCCCceEEE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFV 306 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa 306 (872)
|+.+++..+ .++|+.|++.. ++.......+...|+++..++++.. +..++.+++.+.+ .+++++.
T Consensus 94 al~~~~~~~-~~~gd~V~v~~----P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~k~i~ 159 (357)
T PRK14809 94 ALDYLARAM-LDPGDTVLVPD----PGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY---------DGERIVY 159 (357)
T ss_pred HHHHHHHHh-cCCCCEEEEeC----CChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh---------cCCcEEE
Confidence 999999887 47899987652 1111222335567999999988542 2344555554433 1367888
Q ss_pred EeCccCcccchhcHHHH-HHHH--HCCcEEEeecccc--CCCCCccCCC-CCCCCcEEEEcccccCCCCCCc--eEEEEE
Q 002866 307 FPVQSRVTGAKYSYQWM-ALAQ--QNHWHVLLDAGSL--GPKDMDSLGL-SLFRPDFIITSFYRVFGFDPTG--FGCLLI 378 (872)
Q Consensus 307 ~p~vSNvTG~i~PLe~I-~~Ar--e~G~~VLVDAAQ~--aG~~mipLDL-s~l~~DFlv~S~HK~fG~~PtG--vG~LyV 378 (872)
++..+|.||+.+|.+.+ +.++ +.+.++++|-+.. .... ..+.. ....-=+++.|+=|.||. .| +|.++.
T Consensus 160 l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~--~GlRiG~~~~ 236 (357)
T PRK14809 160 LTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERP-SAVALVEERDDVAVLRTFSKAYGL--AGLRLGYAVV 236 (357)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCc-hhHHHHhhCCCEEEEecchhHhcC--cchhheeeec
Confidence 99999999999999743 3333 2378899999842 2110 11111 111122677899999983 36 788888
Q ss_pred eCCCccccc
Q 002866 379 KKSVMGSLQ 387 (872)
Q Consensus 379 Rk~~i~~L~ 387 (872)
.++.++.+.
T Consensus 237 ~~~~~~~~~ 245 (357)
T PRK14809 237 PEEWADAYA 245 (357)
T ss_pred CHHHHHHHH
Confidence 776665553
No 206
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=98.83 E-value=4.3e-08 Score=107.87 Aligned_cols=209 Identities=13% Similarity=0.106 Sum_probs=135.5
Q ss_pred ceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc------CCCCCCCcEEEe
Q 002866 150 KVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL------NIPENEYGLVFT 222 (872)
Q Consensus 150 ~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL------gA~~dEY~VVFT 222 (872)
.+.|+.+--. +.|+.+++++.+ .+.........|..+. ....|+.||+++ +++++ +|++|
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~-------~l~~~~~~~~~Y~~~g----~~~lr~aia~~~~~~~~~~~~~~--~I~it 94 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAE-------AVAEAAAGLNRYPDRD----AVALRADLAAYLTAQTGVGLTVE--NVWAA 94 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHH-------HHhhhhhhhccCCCCc----hHHHHHHHHHHhhhhccCCCChh--hEEEC
Confidence 4667666544 355666666432 1111000112343332 357899999998 56665 59999
Q ss_pred CCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCc
Q 002866 223 VSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 223 snATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
+|+++++.+++..+. .+|+.|++.. ++.......++..|+++..++.+. +..++.+++++++.. .++
T Consensus 95 ~G~~~~l~~~~~~~~-~~gd~v~v~~----P~y~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~~~~-------~~~ 161 (368)
T PRK03317 95 NGSNEILQQLLQAFG-GPGRTALGFV----PSYSMHPIIARGTHTEWVEGPRAA-DFTLDVDAAVAAIAE-------HRP 161 (368)
T ss_pred CCHHHHHHHHHHHhc-CCCCEEEEeC----CChHHHHHHHHhcCCeeEEcccCC-CCCCCHHHHHHHHhc-------cCC
Confidence 999999999999874 6899987642 223333445666788888777643 346789999888853 146
Q ss_pred eEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeecccc-C---CCCCccCCCCCCCCc-EEEEcccccCCCCCCc--eE
Q 002866 303 GLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSL-G---PKDMDSLGLSLFRPD-FIITSFYRVFGFDPTG--FG 374 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~-a---G~~mipLDLs~l~~D-Flv~S~HK~fG~~PtG--vG 374 (872)
+++.++..+|.||..+|.+.+ ..++..++++++|-+.. . +. ...+.+....++ +++.|+-|.||. | | +|
T Consensus 162 ~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~-~-GlRiG 238 (368)
T PRK03317 162 DVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGT-PSALTLLPEYPRLVVSRTMSKAFAF-A-GGRLG 238 (368)
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCC-cCHHHHHHhCCCEEEEEechhhhcc-c-hhhhh
Confidence 788888889999999999865 45566789999999954 2 21 011111111234 566699999984 2 5 58
Q ss_pred EEEEeCCCccccc
Q 002866 375 CLLIKKSVMGSLQ 387 (872)
Q Consensus 375 ~LyVRk~~i~~L~ 387 (872)
+++..++.++.+.
T Consensus 239 ~~~~~~~~~~~l~ 251 (368)
T PRK03317 239 YLAAAPAVVDALR 251 (368)
T ss_pred hhhCCHHHHHHHH
Confidence 8887776665553
No 207
>PRK09148 aminotransferase; Validated
Probab=98.83 E-value=3.8e-08 Score=110.29 Aligned_cols=173 Identities=13% Similarity=0.074 Sum_probs=116.7
Q ss_pred HHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.||+++ | +++++ .|++|+|+++|+.+++..+ ..+||.|++..- .+... ...++..|+++..+|
T Consensus 71 ~~lr~aia~~~~~~~g~~~~~~~-~I~it~G~~~al~~~~~~l-~~~gd~Vl~~~P-~y~~~---~~~~~~~g~~v~~v~ 144 (405)
T PRK09148 71 PGLRRAQAAYYARRFGVKLNPDT-QVVATLGSKEGFANMAQAI-TAPGDVILCPNP-SYPIH---AFGFIMAGGVIRSVP 144 (405)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCC-cEEEcCChHHHHHHHHHHh-cCCCCEEEEcCC-CCccc---HHHHHhcCCEEEEEe
Confidence 36888888877 4 44431 5999999999999999988 478999876521 12222 233455799999999
Q ss_pred ccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC----CCCC
Q 002866 274 FKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG----PKDM 345 (872)
Q Consensus 274 vd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a----G~~m 345 (872)
.+..+. ..+++++++... .++++++.++.-+|.||..+|.+ ++..|+++++++++|-+-.- +...
T Consensus 145 ~~~~~~--~~~~l~~~~~~~-----~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~ 217 (405)
T PRK09148 145 AEPDEE--FFPALERAVRHS-----IPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPP 217 (405)
T ss_pred CCCCCC--CccCHHHHHhhc-----cccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCC
Confidence 864322 234566555421 23688999998899999999985 34667999999999998421 1100
Q ss_pred cc-CCCCC-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 346 DS-LGLSL-FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 346 ip-LDLs~-l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
.+ ..+.. .+..+++.|+-|.||. .| +|+++..+++++.+.
T Consensus 218 ~s~~~~~~~~~~~i~~~SfSK~~~~--pGlR~G~~v~~~~~i~~l~ 261 (405)
T PRK09148 218 PSVLQVPGAKDVTVEFTSMSKTFSM--AGWRMGFAVGNERLIAALT 261 (405)
T ss_pred CChhhCCCccCcEEEEeccccccCC--cchheeeeeCCHHHHHHHH
Confidence 01 11111 1234678999999984 36 899987776665553
No 208
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=98.82 E-value=9.2e-08 Score=110.90 Aligned_cols=173 Identities=12% Similarity=0.137 Sum_probs=117.7
Q ss_pred HHHHHHHHHhcC--------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHH-HcCcEEE
Q 002866 200 HDIKTRIMDHLN--------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAK-EKGAKVY 270 (872)
Q Consensus 200 eeARerIA~lLg--------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~Ak-rkGaeV~ 270 (872)
.+.|+.||++++ ++++ .|++|+|+++|+.+++..+. .+||.|++..-+ +... ...++ +.|+++.
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe--~Ivit~Ga~~al~~l~~~l~-~pGD~Vlv~~P~-Y~~~---~~~~~~~~G~~vv 169 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPE--RVVMSGGATGANETIMFCLA-DPGDVFLIPSPY-YAAF---DRDLRWRTGVEII 169 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChh--hEEEccchHHHHHHHHHHhC-CCCCEEEECCCC-ccch---HHHHHhhCCCEEE
Confidence 468888888876 6666 59999999999999999984 789998865321 1222 22233 5799999
Q ss_pred EEeccC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccccC----
Q 002866 271 SAWFKW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSLG---- 341 (872)
Q Consensus 271 ~Vpvd~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~a---- 341 (872)
.+|++. ++..++.+.++.++.... ....+++++.++.-+|.||+++|.+. +..|+++++++++|-+-..
T Consensus 170 ~v~~~~~~~~~~~~~~le~a~~~a~--~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~ 247 (496)
T PLN02376 170 PVPCSSSDNFKLTVDAADWAYKKAQ--ESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFA 247 (496)
T ss_pred EEeCCCCccCcCCHHHHHHHHHHHH--hcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccC
Confidence 999853 234678888877654211 11236788888999999999999863 4567899999999998432
Q ss_pred CCCCcc---C----CCCCCCCc--EEEEcccccCCCCCCceEEEEEeCC
Q 002866 342 PKDMDS---L----GLSLFRPD--FIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 342 G~~mip---L----DLs~l~~D--Flv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
+....+ + |.....+| .++.|+-|.||.+=--+|+++..++
T Consensus 248 ~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~ 296 (496)
T PLN02376 248 GGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND 296 (496)
T ss_pred CCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH
Confidence 211011 1 11111234 3468999999852245899998543
No 209
>PRK06107 aspartate aminotransferase; Provisional
Probab=98.82 E-value=4.5e-08 Score=109.40 Aligned_cols=174 Identities=13% Similarity=0.089 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
++.+.+.+.+.+.+|..-...+|++|+|+|+|+.+++.++ +.+|+.|++..- .+.....+ ....|+++..++.+.
T Consensus 74 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~vl~~~p-~y~~y~~~---~~~~~~~~~~v~~~~ 148 (402)
T PRK06107 74 ALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMAT-LEAGDEVIIPAP-YWVSYPDM---VLANDGTPVIVACPE 148 (402)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh-cCCCCEEEEecC-CCcCHHHH---HHHcCCEEEEecCCc
Confidence 4555566666666676322226999999999999998876 678999876532 11122222 233567777777653
Q ss_pred -CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHC-CcEEEeecccc----CCCCCc
Q 002866 277 -PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQN-HWHVLLDAGSL----GPKDMD 346 (872)
Q Consensus 277 -p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~-G~~VLVDAAQ~----aG~~mi 346 (872)
.+..++.+++++++.. +++++.++..+|.||..+|.+. ++.|+++ ++++++|-+-. -+..
T Consensus 149 ~~~~~~~~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~-- 218 (402)
T PRK06107 149 EQGFKLTPEALEAAITP--------RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEP-- 218 (402)
T ss_pred ccCCCCCHHHHHhhcCc--------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCC--
Confidence 2345778888877642 4788888889999999999852 4567887 99999997631 1110
Q ss_pred cCCCCCC-----CCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 347 SLGLSLF-----RPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 347 pLDLs~l-----~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
...+..+ .--+++.|+.|.||. .| +|+++..+++++.+.
T Consensus 219 ~~~~~~~~~~~~~~vi~~~S~SK~~~~--pGlRiG~~~~~~~~~~~~~ 264 (402)
T PRK06107 219 TPHLLAAAPELRDRVLVTNGVSKTYAM--TGWRIGYAAGPADLIAAIN 264 (402)
T ss_pred CCCHHHhCcCccCCEEEEeccchhhcC--cccceeeeecCHHHHHHHH
Confidence 0111111 234778899999984 46 599987777665544
No 210
>PRK06348 aspartate aminotransferase; Provisional
Probab=98.80 E-value=6.3e-08 Score=107.46 Aligned_cols=171 Identities=13% Similarity=0.120 Sum_probs=117.7
Q ss_pred HHHHHHHHhc------CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec
Q 002866 201 DIKTRIMDHL------NIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 201 eARerIA~lL------gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv 274 (872)
..|+.||+++ +++++ .|++|+|+++|+.+++.++ ..+|++|++.. +....+...++..|+++..+|.
T Consensus 70 ~lr~~ia~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~----p~y~~~~~~~~~~g~~~~~~~~ 142 (384)
T PRK06348 70 ELIEEIIKYYSKNYDLSFKRN--EIMATVGACHGMYLALQSI-LDPGDEVIIHE----PYFTPYKDQIEMVGGKPIILET 142 (384)
T ss_pred HHHHHHHHHHHHHhCCCCChh--hEEEcCChHHHHHHHHHHh-cCCCCEEEEeC----CCCcchHHHHHHcCCEEEEecC
Confidence 5778888777 35665 5999999999999999988 47899987652 2222344455667999888886
Q ss_pred cC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc--C-CCCCc
Q 002866 275 KW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL--G-PKDMD 346 (872)
Q Consensus 275 d~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~--a-G~~mi 346 (872)
.. .+..++.++|++++.. ++++|.++.-+|.||..++.+ +++.|+++++++++|-+-. . .....
T Consensus 143 ~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 143 YEEDGFQINVKKLEALITS--------KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred CcCcCCcCCHHHHHHhhCc--------CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 32 2345788999887742 467888888899999999974 3456789999999999832 1 11001
Q ss_pred c-CCCCC-CCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 347 S-LGLSL-FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 347 p-LDLs~-l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
+ ..+.. .+-.+++.|+=|.||.+=--+|+++..+..+..+
T Consensus 215 ~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~ 256 (384)
T PRK06348 215 PMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETA 256 (384)
T ss_pred chhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHH
Confidence 1 11111 1234788899999884123378888766654443
No 211
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=98.80 E-value=4.9e-08 Score=106.12 Aligned_cols=181 Identities=16% Similarity=0.163 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHhcC------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEE
Q 002866 198 VEHDIKTRIMDHLN------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYS 271 (872)
Q Consensus 198 ~ieeARerIA~lLg------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~ 271 (872)
.....|+.||++++ .+++ ..|++|+|+.+++.++...+...+|+.|++..- .|. .+.+.++..|+++..
T Consensus 45 g~~~lr~~ia~~~~~~~~~~~~~~-~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P-~y~---~~~~~~~~~g~~~~~ 119 (363)
T PF00155_consen 45 GYPELREAIADFLGRRYGVPVDPE-ANILVTSGAQAALFLLLRLLKINPGDTVLVPDP-CYP---SYIEAARLLGAEVIP 119 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTHHTTGG-EGEEEESHHHHHHHHHHHHHHSSTTSEEEEEES-SST---HHHHHHHHTTSEEEE
T ss_pred hhHHHHHHHHHHhhhccCcccccc-eEEEEecccccchhhhhhcccccccccceecCC-ccc---cccccccccCceeee
Confidence 35689999999999 6654 259999999999998887774467888876532 233 334556778999999
Q ss_pred Eecc-CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH----HHHHHCCcEEEeeccccCCCCCc
Q 002866 272 AWFK-WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM----ALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 272 Vpvd-~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I----~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
+|++ ..+..++.++|++.+...+. ...++++|.++..+|.||..+|.+.+ ..|+++++++++|-+......--
T Consensus 120 ~~~~~~~~~~~d~~~l~~~l~~~~~--~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~ 197 (363)
T PF00155_consen 120 VPLDSENDFHLDPEALEEALDELPS--KGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGD 197 (363)
T ss_dssp EEEEETTTTEETHHHHHHHHHTSHT--TTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSS
T ss_pred ccccccccccccccccccccccccc--cccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCC
Confidence 9864 23457899999999975321 12247899999999999999998633 34789999999999964322100
Q ss_pred ------cCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 347 ------SLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 347 ------pLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
...+.....-+++.|+-|.||. .| +|++++.+.+++.++
T Consensus 198 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~--~GlRvG~i~~~~~~~~~l~ 244 (363)
T PF00155_consen 198 PDFGPIRSLLDEDDNVIVVGSLSKSFGL--PGLRVGYIVAPPELIERLR 244 (363)
T ss_dssp SHTHHHHGHHTTTSTEEEEEESTTTTTS--GGGTEEEEEEEHHHHHHHH
T ss_pred CccCcccccccccccceeeeeccccccc--cccccccccchhhhhhhhh
Confidence 0112222224999999999985 36 999999777766554
No 212
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=98.80 E-value=1e-07 Score=105.56 Aligned_cols=165 Identities=18% Similarity=0.149 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEe-cc-cCchhHHHHHHHHHHcCcEEEEEe
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTM-FD-YESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~-~D-hEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.....+.++.+|+++|++++ .+++|+|+++|+..++.++. ++|++|++. .| ..|.++. ..++..|+++..
T Consensus 53 ~~~~~~Le~~lA~~~g~~~e--~ilv~~gg~~a~~~~~~al~-~~gd~Vli~~~d~p~~~s~~---~~~~l~ga~~~~-- 124 (346)
T TIGR03576 53 AIFEEKVQELGREHLGGPEE--KILVFNRTSSAILATILALE-PPGRKVVHYLPEKPAHPSIP---RSCKLAGAEYFE-- 124 (346)
T ss_pred HHHHHHHHHHHHHHcCCCcc--eEEEECCHHHHHHHHHHHhC-CCCCEEEECCCCCCCchhHH---HHHHHcCCEEec--
Confidence 36778999999999999876 49999999999999999885 789998763 23 2345543 334556877632
Q ss_pred ccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccch---hcHH-HHHHHHHCCcEEEeeccccCCCCCccC-
Q 002866 274 FKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAK---YSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSL- 348 (872)
Q Consensus 274 vd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i---~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipL- 348 (872)
+ .+.+++ .. .+++++|.++. .+++|.+ .||+ ++..|+++|+++++|-|+..+.. ...
T Consensus 125 ~------~~l~~l----~~------~~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~-~~~~ 186 (346)
T TIGR03576 125 S------DELSEL----KK------IDGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVR-RLYG 186 (346)
T ss_pred c------CCHHHH----hh------CcCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCcccccc-ccCC
Confidence 1 123332 11 12478888876 5789998 4665 45678999999999999876520 011
Q ss_pred --CCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 349 --GLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 349 --DLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
....+++|+++.|++|.+.+ +. .|+++.+++.++.|..
T Consensus 187 ~~~~~~~~~divv~s~SKalaG-~r-~G~v~~~~~li~~l~~ 226 (346)
T TIGR03576 187 QPPALDLGADLVVTSTDKLMDG-PR-GGLLAGRKELVDKIKS 226 (346)
T ss_pred CCCHHHcCCcEEEeccchhccc-cc-eEEEEeCHHHHHHHHH
Confidence 12234679999999998744 55 5899888887776653
No 213
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.79 E-value=2.5e-07 Score=103.98 Aligned_cols=145 Identities=16% Similarity=0.065 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p 277 (872)
.+.+--+.+|+++|+.. .|-|+|+|.|+.+...++...+||+||++.- +..+-.......|++.++|.+|..
T Consensus 35 ~v~~FE~~~ae~~G~k~----ava~~sgT~AL~laL~al~ig~GDeVI~ps~----TfvATan~i~~~Ga~PVFvDid~~ 106 (374)
T COG0399 35 FVRRFEQAFAEYLGVKY----AVAVSSGTAALHLALLALAIGPGDEVIVPSF----TFVATANAVLLVGAKPVFVDIDPD 106 (374)
T ss_pred HHHHHHHHHHHHhCCCe----EEEecChHHHHHHHHHhcCCCCCCEEEecCC----chHHHHHHHHHcCCeEEEEecCCc
Confidence 44455568999999963 7889999999999999777889999886532 122222333447999999999988
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCC--
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR-- 354 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~-- 354 (872)
+..+|++.|+++|.. +|+-|...| .-|..-+++ |++.|+++|+.|+-||||+.|. ...=...+
T Consensus 107 T~nid~~~ie~aIt~--------~tKAIipVh---l~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga---~y~gk~vGt~ 172 (374)
T COG0399 107 TLNIDPDLIEAAITP--------RTKAIIPVH---LAGQPCDMDAIMALAKRHGLPVIEDAAQAHGA---TYKGKKVGSF 172 (374)
T ss_pred ccCCCHHHHHHHccc--------CCeEEEEeh---hccCCCCHHHHHHHHHHcCCeEEEEcchhccC---eecCcccccc
Confidence 899999999999974 377776666 479999998 6778999999999999999985 23322222
Q ss_pred CcEEEEcccc
Q 002866 355 PDFIITSFYR 364 (872)
Q Consensus 355 ~DFlv~S~HK 364 (872)
-|+-+||||=
T Consensus 173 Gd~~~fSF~~ 182 (374)
T COG0399 173 GDIGAFSFHA 182 (374)
T ss_pred cceEEEEecC
Confidence 4677777763
No 214
>PRK08175 aminotransferase; Validated
Probab=98.78 E-value=9.4e-08 Score=106.48 Aligned_cols=172 Identities=13% Similarity=0.097 Sum_probs=115.7
Q ss_pred HHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.|++++ | +++++ .|++|+|+++++++++..+ ..+|++|++.. ..+... ...++..|+++..++
T Consensus 70 ~~lr~aia~~~~~~~g~~~~~~~-~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~-P~y~~~---~~~~~~~g~~~~~v~ 143 (395)
T PRK08175 70 PRLRRAISRWYQDRYDVDIDPES-EAIVTIGSKEGLAHLMLAT-LDHGDTVLVPN-PSYPIH---IYGAVIAGAQVRSVP 143 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCC-cEEEccCcHHHHHHHHHHh-CCCCCEEEEcC-CCCcch---HHHHHHcCCeEEEEe
Confidence 46777777775 3 44442 5999999999999999887 47899988652 122222 122345799999999
Q ss_pred ccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc--C--CCCC
Q 002866 274 FKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL--G--PKDM 345 (872)
Q Consensus 274 vd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~--a--G~~m 345 (872)
.+..+ ...+++++++.. ..++++++.++..+|.||..+|.+ +++.|+++|+++++|-+-. . +...
T Consensus 144 ~~~~~--~~~~~l~~~l~~-----~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~ 216 (395)
T PRK08175 144 LVEGV--DFFNELERAIRE-----SYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKA 216 (395)
T ss_pred cccCC--CcHHHHHHHHhh-----ccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCC
Confidence 87532 246788877753 123588999888899999999994 4567899999999998842 1 2100
Q ss_pred cc-CCCCC-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccc
Q 002866 346 DS-LGLSL-FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSL 386 (872)
Q Consensus 346 ip-LDLs~-l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L 386 (872)
.+ ..+.. .+.-+++.|+=|.||. | | +|+++..+++++.+
T Consensus 217 ~~~~~~~~~~~~~i~~~S~SK~~g~-p-GlRiG~~~~~~~l~~~~ 259 (395)
T PRK08175 217 PSIMQVPGAKDVAVEFFTLSKSYNM-A-GWRIGFMVGNPELVSAL 259 (395)
T ss_pred cchhcCCCcccCEEEEeeccccccC-c-chhheeeeCCHHHHHHH
Confidence 01 11111 1233677999999985 3 5 68887666555444
No 215
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=98.76 E-value=1.8e-07 Score=104.42 Aligned_cols=168 Identities=14% Similarity=0.131 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
....+.++++|+++|.+ . .+|++++++|+..++..+. +.+++.|++. ...|.++... ++..|+++..++.
T Consensus 90 ~~~~~Le~~la~~~g~~-~---~l~~~sG~~an~~ai~~l~~~~~~~~v~~~-~~~h~s~~~~---~~~~g~~~~~~~~- 160 (402)
T TIGR01821 90 IPHVELEAELADLHGKE-S---ALVFTSGYVANDATLATLAKIIPGCVIFSD-ELNHASMIEG---IRHSGAEKFIFRH- 160 (402)
T ss_pred HHHHHHHHHHHHHhCCC-e---EEEECchHHHHHHHHHHhhCCCCCCEEEEc-chHhHHHHHH---HHHcCCeEEEECC-
Confidence 34578999999999963 2 4555556887776666543 3356555554 3456665432 3446887765432
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccC------
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSL------ 348 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipL------ 348 (872)
.+.+++++++... ...++++|++.+++|++|.+.|++. .+.|+++|++++||.+|..|.- .+.
T Consensus 161 -----~d~~~l~~~l~~~----~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~-g~~g~g~~~ 230 (402)
T TIGR01821 161 -----NDVAHLEKLLQSV----DPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY-GPRGGGIAE 230 (402)
T ss_pred -----CCHHHHHHHHHhc----cCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc-CCCCCccch
Confidence 2567888877532 1125899999999999999999974 5678999999999999985520 111
Q ss_pred --CCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 349 --GLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 349 --DLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++. ..+|+++.++-|.||. .| |+++.+++.++.+.
T Consensus 231 ~~~~~-~~~div~~t~sKa~g~--~G-G~i~~~~~~~~~l~ 267 (402)
T TIGR01821 231 RDGLM-HRIDIIEGTLAKAFGV--VG-GYIAASRKLIDAIR 267 (402)
T ss_pred hccCC-CCCeEEEEechhhhcc--CC-ceeecCHHHHHHHH
Confidence 111 2479999999999984 34 66666766666554
No 216
>PRK10534 L-threonine aldolase; Provisional
Probab=98.75 E-value=8.8e-08 Score=103.58 Aligned_cols=174 Identities=8% Similarity=0.028 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHc-CcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEK-GAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~Akrk-GaeV~~Vpvd~ 276 (872)
...+.|++||+++|+++ +++|.|+++++.+....+ ..+|++|++..- .|...... ..+... |+++..++++.
T Consensus 35 ~~~~L~~~la~~~g~~~----~~v~~~g~~a~~~~l~~~-~~~gd~vi~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 107 (333)
T PRK10534 35 TVNALQDYAAELSGKEA----ALFLPTGTQANLVALLSH-CERGEEYIVGQA-AHNYLYEA-GGAAVLGSIQPQPIDAAA 107 (333)
T ss_pred HHHHHHHHHHHHhCCCe----EEEeCchHHHHHHHHHHh-cCCCCeeEEech-hhhhHhcC-CchHHhcCceEEeecCCC
Confidence 45689999999999864 568888888876666554 568899875421 22222110 001222 36777777654
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH----HHHHHCCcEEEeeccccCCC----CCccC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM----ALAQQNHWHVLLDAGSLGPK----DMDSL 348 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I----~~Are~G~~VLVDAAQ~aG~----~mipL 348 (872)
+..++.++|++++.+... ...++++|.+. ++.||+++|.+.+ ..|+++++.+++|.|..... .....
T Consensus 108 -~~~~d~~~l~~~i~~~~~--~~~~~~lv~l~--np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~ 182 (333)
T PRK10534 108 -DGTLPLDKVAAKIKPDDI--HFARTRLLSLE--NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELK 182 (333)
T ss_pred -CCCCCHHHHHHhhcccCc--CcccceEEEEe--cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHH
Confidence 567889999888853110 01247888887 4568999999754 45688999999998743221 00001
Q ss_pred CCCCCCCcEEEEcccccCCCCCCceE-EEEEeCCCccccc
Q 002866 349 GLSLFRPDFIITSFYRVFGFDPTGFG-CLLIKKSVMGSLQ 387 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~~PtGvG-~LyVRk~~i~~L~ 387 (872)
.+. -.+|.++.|+.|.||. | +| +++..+++++.++
T Consensus 183 ~~~-~~~~~~~~s~SK~~~~-~--~G~~~~~~~~~i~~~~ 218 (333)
T PRK10534 183 EIT-QYCDSFTICLSKGLGT-P--VGSLLVGNRDYIKRAR 218 (333)
T ss_pred HHH-hcCCEEEEEeEcCCCC-c--ccceEEcCHHHHHHHH
Confidence 111 1357777899999886 4 67 4555666665553
No 217
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.74 E-value=3.4e-07 Score=101.84 Aligned_cols=210 Identities=11% Similarity=0.053 Sum_probs=131.6
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc--------CCCCCCCcE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL--------NIPENEYGL 219 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL--------gA~~dEY~V 219 (872)
+.+.|+.+-... .|+.+.+++.+ .+. . ...|+.+. -..+.|+.||+++ |+++++ .|
T Consensus 29 ~~i~l~~~~p~~~~~~~~~~a~~~-------~~~-~---~~~Y~~~~---G~~~lr~aia~~~~~~~~~~~~~~~~~-~i 93 (393)
T TIGR03538 29 PPIALSIGEPKHPTPAFVLEALRE-------NLH-G---LSTYPTTK---GLPELRQAIARWLERRFDLPTGVDPER-HV 93 (393)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHH-------Hhh-c---cCCCCCCC---CCHHHHHHHHHHHHHhhCCcccCCCCc-eE
Confidence 366777666553 45556665321 111 1 12344332 1346888888888 355532 59
Q ss_pred EEeCCHHHHHHHHHhhCCCCCCCe--EEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHHHhhhhcc
Q 002866 220 VFTVSRGSAFKLLAESYPFHTNKK--LLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQISSKKRR 296 (872)
Q Consensus 220 VFTsnATeALnLVaeslpf~~Gd~--ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~I~~~~rr 296 (872)
++|+|+++|+.+++..+. .+|+. |++. + +........++..|+++..+|++.. +..++.+++++++..
T Consensus 94 ~it~Ga~~al~~~~~~l~-~~gd~~~vlv~-~---P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---- 164 (393)
T TIGR03538 94 LPVNGTREALFAFAQAVI-NPGQAPLVVMP-N---PFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR---- 164 (393)
T ss_pred EECCCcHHHHHHHHHHHc-CCCCcceEEec-C---CCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh----
Confidence 999999999999998873 67886 5543 2 1222233446678999999998632 235788888877743
Q ss_pred CCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc--CCC-CCccCC----CCCCCC-----cEEEE
Q 002866 297 KKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL--GPK-DMDSLG----LSLFRP-----DFIIT 360 (872)
Q Consensus 297 ~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~--aG~-~mipLD----Ls~l~~-----DFlv~ 360 (872)
+++++.++.-+|.||..++.+ ++..|++++++|++|-+-. ... ...+.. +...+. =+++.
T Consensus 165 ----~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~ 240 (393)
T TIGR03538 165 ----RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFH 240 (393)
T ss_pred ----cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEe
Confidence 478888889999999999964 3466789999999999832 110 000111 011111 27899
Q ss_pred cccccCCCCCCceEEEEEeCCCcccc
Q 002866 361 SFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 361 S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
|+-|.||.+=..+|+++..+..++.+
T Consensus 241 S~SK~~~~~GlRvG~~i~~~~l~~~~ 266 (393)
T TIGR03538 241 SLSKRSNLPGLRSGFVAGDAEILKAF 266 (393)
T ss_pred cchhhcCCcccceEEEecCHHHHHHH
Confidence 99998774212378877665554433
No 218
>PRK08068 transaminase; Reviewed
Probab=98.73 E-value=1.7e-07 Score=104.14 Aligned_cols=172 Identities=12% Similarity=0.070 Sum_probs=118.9
Q ss_pred HHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|++||+++ | +++++ +|++|+|+++++.+++..+. .+|+.|++.. ..+. .....++..|+++..+|
T Consensus 73 ~~lr~aia~~~~~~~g~~~~~~~-~i~it~G~~~~l~~~~~~~~-~~gd~vlv~~-P~y~---~~~~~~~~~g~~~~~i~ 146 (389)
T PRK08068 73 PFLKEAAADFYKREYGVTLDPET-EVAILFGGKAGLVELPQCLM-NPGDTILVPD-PGYP---DYLSGVALARAQFETMP 146 (389)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCc-cEEEcCCcHHHHHHHHHHhC-CCCCEEEEcC-CCCc---chHHHHHhcCCEEEEee
Confidence 46888888886 5 45541 49999999999999988874 6899887652 1222 23344567899999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecccc-C---CCC
Q 002866 274 FKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSL-G---PKD 344 (872)
Q Consensus 274 vd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~-a---G~~ 344 (872)
.+.. +..++.+++++.+.. ++++|.++.-+|.||+.+|.+. ++.|+++++++++|-+-. . +..
T Consensus 147 ~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~ 218 (389)
T PRK08068 147 LIAENNFLPDYTKIPEEVAE--------KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK 218 (389)
T ss_pred cccccCCCCCHHHHHHhccc--------cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCC
Confidence 8643 345677888777642 4778888877899999999953 456789999999999842 1 110
Q ss_pred Ccc-CCCC-CCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 345 MDS-LGLS-LFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 345 mip-LDLs-~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
..+ +.+. ..+..+++.|+=|.||. .| +|.++..+++++.+.
T Consensus 219 ~~s~~~~~~~~~~~i~~~S~SK~~g~--~GlRiG~~~~~~~l~~~l~ 263 (389)
T PRK08068 219 PVSFLQTPGAKDVGIELYTLSKTFNM--AGWRVAFAVGNESVIEAIN 263 (389)
T ss_pred CcChhhCCCccCCEEEEecchhccCC--ccceeEeEecCHHHHHHHH
Confidence 011 1111 12245788999999984 36 898887776665543
No 219
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=98.72 E-value=3e-07 Score=103.86 Aligned_cols=164 Identities=12% Similarity=0.069 Sum_probs=115.4
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.++||. .....++||.+-|+. .++.++++..|+..+..++ .++||+||...+.-.....-+.+.+.+.|++
T Consensus 51 R~gnPt----~~~le~~la~Le~g~----~a~~~~SGmaAi~~~l~~l-l~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~ 121 (386)
T PF01053_consen 51 RYGNPT----VRALEQRLAALEGGE----DALLFSSGMAAISAALLAL-LKPGDHIVASDDLYGGTYRLLEELLPRFGVE 121 (386)
T ss_dssp TTC-HH----HHHHHHHHHHHHT-S----EEEEESSHHHHHHHHHHHH-S-TTBEEEEESSSSHHHHHHHHHCHHHTTSE
T ss_pred cccccc----HHHHHHHHHHhhccc----ceeeccchHHHHHHHHHhh-cccCCceEecCCccCcchhhhhhhhcccCcE
Confidence 346665 356778899999983 3666789999998877776 4789998876553234343444567778999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCC-cEEEeeccccCCCCCc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNH-WHVLLDAGSLGPKDMD 346 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G-~~VLVDAAQ~aG~~mi 346 (872)
+.+++.. +.++++++|.. +|++|-+-..+|.+..+.||+. ++.||++| +.++||.+-+.|.
T Consensus 122 v~~~d~~------d~~~l~~~l~~--------~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~--- 184 (386)
T PF01053_consen 122 VTFVDPT------DLEALEAALRP--------NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPY--- 184 (386)
T ss_dssp EEEESTT------SHHHHHHHHCT--------TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTT---
T ss_pred EEEeCch------hHHHHHhhccc--------cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecccccee---
Confidence 9987542 57889888863 6999999999999999999984 56789999 9999999966664
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCc---eEEEEEeC
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTG---FGCLLIKK 380 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtG---vG~LyVRk 380 (872)
.++.=.+++|+++-|+-|++++ .| .|++.++.
T Consensus 185 ~~~pL~~GaDivv~S~TKyl~G--hsdv~~G~vv~~~ 219 (386)
T PF01053_consen 185 NQNPLELGADIVVHSATKYLSG--HSDVMGGAVVVNG 219 (386)
T ss_dssp TC-GGGGT-SEEEEETTTTTTT--SSSE-EEEEEESS
T ss_pred eeccCcCCceEEEeeccccccC--CcceeeEEEEECc
Confidence 2332346899999999999886 24 45555544
No 220
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.71 E-value=2.9e-07 Score=103.48 Aligned_cols=164 Identities=13% Similarity=0.090 Sum_probs=112.6
Q ss_pred HHHHHHHHHhc------CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHL------NIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lL------gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.||+++ +++++ .|++|+|+++|+.+++..+. .+|+.|++..- ....+...++..|+++..++
T Consensus 77 ~~lr~aia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~~l~-~~gd~v~v~~P----~y~~~~~~~~~~g~~~~~~~ 149 (409)
T PLN00143 77 LPARRAIADYLSNDLPYQLSPD--DVYLTLGCKHAAEIIIKVLA-RPEANILLPRP----GFPDVETYAIFHHLEIRHFD 149 (409)
T ss_pred HHHHHHHHHHHHhhcCCCCCHh--hEEEecChHHHHHHHHHHHc-CCCCEEEEcCC----CCcCHHHHHHHcCCEEEEEe
Confidence 36888888887 35555 59999999999999999874 78999876531 12223344566899999998
Q ss_pred ccC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc--C--CCC
Q 002866 274 FKW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL--G--PKD 344 (872)
Q Consensus 274 vd~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~--a--G~~ 344 (872)
.+. .+..++.++|++++.. +++++.++.-+|.||++++.+ ++..|+++++++++|-+-. . +..
T Consensus 150 ~~~~~~~~~d~~~l~~~~~~--------~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~ 221 (409)
T PLN00143 150 LLPEKGWEVDLDAVEAIADE--------NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKP 221 (409)
T ss_pred ccCCCCCcCCHHHHHHhccc--------CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCC
Confidence 742 2345788999876642 477888888899999999975 3456789999999999832 1 110
Q ss_pred CccCC-CCCCCCcEEEEcccccCCCCCCceEEEEE
Q 002866 345 MDSLG-LSLFRPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 345 mipLD-Ls~l~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
..++. +.....=+++.|+=|.|+.+=-.+|.++.
T Consensus 222 ~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~ 256 (409)
T PLN00143 222 FVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVT 256 (409)
T ss_pred CcchhhhcccCcEEEEccchhhcCCCccceEEEEe
Confidence 01111 11111227889999998752233677765
No 221
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=98.70 E-value=2.4e-07 Score=104.14 Aligned_cols=171 Identities=15% Similarity=0.187 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....+.++++|+++|+.. .|+|++|.++....+. .+ +++||+|++. +..|.++..-. .-.++++.+++..
T Consensus 43 ~~~~~LE~~lA~~~g~e~---al~~~sG~~a~~~~i~-~l-~~~GD~Vl~~-~~~h~s~~~~~---~l~~~~~~~~~~~- 112 (392)
T PLN03227 43 DAHLELEQCMAEFLGTES---AILYSDGASTTSSTVA-AF-AKRGDLLVVD-RGVNEALLVGV---SLSRANVRWFRHN- 112 (392)
T ss_pred HHHHHHHHHHHHHhCCCc---EEEecCcHHHHHHHHH-Hh-CCCCCEEEEe-ccccHHHHHHH---HHcCCeEEEeCCC-
Confidence 367789999999999852 5888888888774444 44 6899998876 34566664322 2235666655432
Q ss_pred CCCccCHHHHHHHHhhhhc------cCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCcc--
Q 002866 277 PTLKLCSTDLRKQISSKKR------RKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDS-- 347 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~r------r~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mip-- 347 (872)
+.+++++.+..... ....+++++|.+..+.|.+|.+.|++. .+.|+++|+.+++|-++..|. ...
T Consensus 113 -----d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~-~g~~G 186 (392)
T PLN03227 113 -----DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGT-LGKSG 186 (392)
T ss_pred -----CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccc-cCCCC
Confidence 34555544332110 001246899999999999999999985 567899999999999987552 011
Q ss_pred ------CCCC-CCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 348 ------LGLS-LFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 348 ------LDLs-~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
+++. ..++|.+++|+.|.+| |. .|++..+++.++.+
T Consensus 187 ~g~~~~~g~~p~~~~Div~~slsk~~g--~~-gg~v~~~~~~~~~~ 229 (392)
T PLN03227 187 RGSLEHAGLKPMVHAEIVTFSLENAFG--SV-GGMTVGSEEVVDHQ 229 (392)
T ss_pred CcHHHHcCCCCCCCceEEEeechhhhh--cc-CcEEecCHHHHHHH
Confidence 1221 2467999999999887 33 24555666655444
No 222
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=98.70 E-value=6.3e-08 Score=106.90 Aligned_cols=195 Identities=14% Similarity=0.134 Sum_probs=128.7
Q ss_pred cCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH--HHHHHHHc
Q 002866 188 ALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW--MAQSAKEK 265 (872)
Q Consensus 188 ~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~--~~~~Akrk 265 (872)
..||+- ....++-++++++++. . .+.|++++|.|..+.+.+.- ++|..+++... -|..... -.++.. .
T Consensus 29 ~~YG~D---~~~~~~e~~~ae~~g~--~--a~~Fv~sGT~aN~lal~~~~-~~~~~vi~~~~-aHi~~~E~Ga~~~~~-~ 98 (342)
T COG2008 29 DVYGED---PTTNALEQRIAELFGK--E--AALFVPSGTQANQLALAAHC-QPGESVICHET-AHIYTDECGAPEFFG-G 98 (342)
T ss_pred CCCCCC---HHHHHHHHHHHHHhCC--c--eEEEecCccHHHHHHHHHhc-CCCCeEEEecc-ccceecccCcHHHHc-C
Confidence 457764 3456788899999998 3 49999999999999888765 78888776543 2332211 111111 2
Q ss_pred CcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH----HHHHHCCcEEEeeccccC
Q 002866 266 GAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM----ALAQQNHWHVLLDAGSLG 341 (872)
Q Consensus 266 GaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I----~~Are~G~~VLVDAAQ~a 341 (872)
|.++.. +..++|.+++++|+..|... ......+.++++--+.++.|++||++.+ ..||++|+.+|+|+|-+.
T Consensus 99 ~~~~~~--~~g~~Gklt~e~v~~~i~~~--d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~ 174 (342)
T COG2008 99 GQKLPI--VPGADGKLTPEDVEAAIRPD--DIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLA 174 (342)
T ss_pred Cceecc--CCCCCCCcCHHHHHHhhcCC--CcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHH
Confidence 333332 33467999999999988642 1234567777777777799999999754 346999999999999432
Q ss_pred CCCCc--cCCCCC--CCCcEEEEcccccCCCCCCceEEEEEeCCCcccccCCCCCCCCCeEE
Q 002866 342 PKDMD--SLGLSL--FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQSGQTGSGMVK 399 (872)
Q Consensus 342 G~~mi--pLDLs~--l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~~~~~GgGtV~ 399 (872)
-- +. ..++.. -+||.+++.+.|..|. | +=.+|+.+.++++..+-..-..|||+.+
T Consensus 175 nA-~valg~~~~~~~~~~D~v~~~~tK~g~~-~-~gAiv~gn~~~~~~a~~~rK~~Ggl~~k 233 (342)
T COG2008 175 NA-LVALGVALKTIKSYVDSVSFCLTKGGGA-P-VGAIVFGNRDFAKRARRWRKRAGGLMRK 233 (342)
T ss_pred HH-HHHcCCCHHHHHhhCCEEEEecccCCcc-e-eeeEEEcCHHHHHHHHHHHHHhcccHhh
Confidence 11 01 233333 3799999999998886 4 3334555667666554333346777754
No 223
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=98.69 E-value=3.9e-08 Score=106.95 Aligned_cols=178 Identities=16% Similarity=0.143 Sum_probs=119.1
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.||.- ...+++.++|+++||.+ ..+|++++|.|..+++..+. +++..+|.... -|-.+..--..+.-.|++
T Consensus 24 ~Yg~D---~~~~~l~~~i~~l~g~e----~a~f~~sGT~An~~al~~~~-~~~~~vi~~~~-aHi~~~E~ga~~~~~G~~ 94 (290)
T PF01212_consen 24 AYGED---PTTARLEERIAELFGKE----AALFVPSGTMANQLALRAHL-RPGESVICADT-AHIHFDETGAIEELSGAK 94 (290)
T ss_dssp CTTSS---HHHHHHHHHHHHHHTSS----EEEEESSHHHHHHHHHHHHH-HTTEEEEEETT-EHHHHSSTTHHHHHTTCE
T ss_pred ccCCC---hhHHHHHHHHHHHcCCC----EEEEeCCCChHHHHHHHHHH-hcCCceecccc-ceeeeeccchhhHhcCcE
Confidence 46543 45678999999999984 26799999999999888875 66777776522 111111101112337999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcc-cchhcHHHHH----HHHHCCcEEEeecccc---
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVT-GAKYSYQWMA----LAQQNHWHVLLDAGSL--- 340 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvT-G~i~PLe~I~----~Are~G~~VLVDAAQ~--- 340 (872)
+..++.+. .|.+++++|++.+..... ..+++++|+++..+|.. |+++|+++++ .||++|+.+++|+|=+
T Consensus 95 ~~~l~~~~-~G~l~~~~l~~~~~~~~~--h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a 171 (290)
T PF01212_consen 95 LIPLPSDD-DGKLTPEDLEAAIEEHGA--HHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANA 171 (290)
T ss_dssp EEEEBECT-GTBB-HHHHHHHHHHHTG--TSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHH
T ss_pred EEECCCcc-cCCCCHHHHHHHhhhccc--cCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHh
Confidence 98887653 289999999999976421 23568999998877754 9999997553 4689999999999932
Q ss_pred ---CCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCc
Q 002866 341 ---GPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVM 383 (872)
Q Consensus 341 ---aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i 383 (872)
.+. .+-++. -.+|.+.+|++|-+|. | +=++|..+++.+
T Consensus 172 ~~~~~~--~~~e~~-~~~D~v~~~~tK~~g~-~-~Gavl~~~~~~i 212 (290)
T PF01212_consen 172 AAALGV--SLAEIA-AGADSVSFGGTKNGGA-P-GGAVLAGNKEFI 212 (290)
T ss_dssp HCHHHH--HHHHHH-TTSSEEEEETTSTT-S-S-SEEEEEESHHHH
T ss_pred hhcccc--cHHHHh-hhCCEEEEEEEccccc-c-cceEEEechHHH
Confidence 222 122222 4799999999998886 3 456677777754
No 224
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=98.68 E-value=4.6e-07 Score=99.82 Aligned_cols=162 Identities=14% Similarity=0.155 Sum_probs=109.0
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT 278 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~ 278 (872)
..+.|++||++++++++ +|++|+|+++++.+++..+. + +.|++.. +....+...++..|+++..++.+.++
T Consensus 56 ~~~lr~~ia~~~~~~~~--~i~it~Ga~~~l~~~~~~~~--~-~~v~i~~----P~y~~~~~~~~~~g~~~~~~~~~~~~ 126 (354)
T PRK06358 56 YLELRKRIASFEQLDLE--NVILGNGATELIFNIVKVTK--P-KKVLILA----PTFAEYERALKAFDAEIEYAELTEET 126 (354)
T ss_pred HHHHHHHHHHHhCCChh--hEEECCCHHHHHHHHHHHhC--C-CcEEEec----CChHHHHHHHHHcCCeeEEEeCcccc
Confidence 46899999999999887 49999999999999998862 3 4555431 22334455667789999999986432
Q ss_pred -CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc--C--CCCCccCC
Q 002866 279 -LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL--G--PKDMDSLG 349 (872)
Q Consensus 279 -g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~--a--G~~mipLD 349 (872)
..++ +++.+.+. .+++++.++.-+|.||..++.+ ++..|+++++++++|.+-. . +.....+.
T Consensus 127 ~~~~d-~~~~~~~~--------~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~ 197 (354)
T PRK06358 127 NFAAN-EIVLEEIK--------EEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMIN 197 (354)
T ss_pred CCCcc-HHHHHhhc--------cCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHH
Confidence 2466 55554443 1478888888899999999964 3466789999999999831 1 11000011
Q ss_pred -CCCCCCcEEEEcccccCCCCCCceEEEEE
Q 002866 350 -LSLFRPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 350 -Ls~l~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
+...+-=+++.|+=|.||.+=..+|.+++
T Consensus 198 ~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~ 227 (354)
T PRK06358 198 YLENFKNLIIIRAFTKFFAIPGLRLGYGLT 227 (354)
T ss_pred hccCCCCEEEEEechhhccCcchhheeeec
Confidence 11111126788999998831233666654
No 225
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=98.68 E-value=7e-07 Score=99.45 Aligned_cols=173 Identities=13% Similarity=0.064 Sum_probs=115.4
Q ss_pred HHHHHHHHHhc----C---CCCCCCcEEEeCCHHHHHHHHHhhCCCCC---CCeEEEecccCchhHHHHHHHHHHcCcEE
Q 002866 200 HDIKTRIMDHL----N---IPENEYGLVFTVSRGSAFKLLAESYPFHT---NKKLLTMFDYESQSVNWMAQSAKEKGAKV 269 (872)
Q Consensus 200 eeARerIA~lL----g---A~~dEY~VVFTsnATeALnLVaeslpf~~---Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV 269 (872)
.+.|+.||+++ | +++++ .|++|+|+++|+.+++..+. .+ |+.|++.. +........++..|+++
T Consensus 68 ~~lr~~ia~~~~~~~g~~~~~~~~-~i~it~G~~~al~~~~~~l~-~~~~~gd~vlv~~----P~y~~~~~~~~~~g~~~ 141 (396)
T PRK09147 68 PALREAIAAWLERRYGLPALDPAT-QVLPVNGSREALFAFAQTVI-DRDGPGPLVVCPN----PFYQIYEGAALLAGAEP 141 (396)
T ss_pred HHHHHHHHHHHHHHhCCCcCCccc-eEEECCChHHHHHHHHHHHc-CCCCCCCEEEEcC----CCccchHHHHHhcCCEE
Confidence 35777888765 6 44432 59999999999999999874 56 77777652 12222334456679999
Q ss_pred EEEeccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccccC-CC
Q 002866 270 YSAWFKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSLG-PK 343 (872)
Q Consensus 270 ~~Vpvd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~a-G~ 343 (872)
..+|++.. +..++.+++++.+.. +++++.++.-+|.||..++.+. ++.|+++++++++|-+-.- -.
T Consensus 142 ~~vp~~~~~~~~~d~~~l~~~~~~--------~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~ 213 (396)
T PRK09147 142 YFLNCDPANNFAPDFDAVPAEVWA--------RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYF 213 (396)
T ss_pred EEeccCccccCccCHHHHHHHHhh--------ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeecccccccc
Confidence 99998643 235788988876642 4788888899999999999853 4567899999999988321 00
Q ss_pred CC--ccCC-C---CCCCCc-----EEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 344 DM--DSLG-L---SLFRPD-----FIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 344 ~m--ipLD-L---s~l~~D-----Flv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
+- .++. + ...+.| +++.|+=|.||.+=..+|+++..+..++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~ 267 (396)
T PRK09147 214 DEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKF 267 (396)
T ss_pred CCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHHH
Confidence 00 0110 1 111222 888999998775213378877665554433
No 226
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=98.67 E-value=4.5e-07 Score=102.37 Aligned_cols=168 Identities=13% Similarity=0.084 Sum_probs=118.1
Q ss_pred HHHHHHHHHhcC--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC
Q 002866 200 HDIKTRIMDHLN--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 200 eeARerIA~lLg--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p 277 (872)
.+.|+.|+++++ +.++ .+|+.|+|+++|+.+++..+. ++||.|++.. ++.......++..|+++..+|++..
T Consensus 124 ~~lr~~ia~~~~~~~~~~-~~Iiit~G~~~al~~~~~~l~-~pgd~Vlv~~----P~y~~~~~~~~~~g~~~~~v~~~~~ 197 (431)
T PRK15481 124 PELHAWAARWLRDDCPVA-FEIDLTSGAIDAIERLLCAHL-LPGDSVAVED----PCFLSSINMLRYAGFSASPVSVDAE 197 (431)
T ss_pred HHHHHHHHHHHhhccCCc-CeEEEecCcHHHHHHHHHHhC-CCCCEEEEeC----CCcHHHHHHHHHcCCeEEeeccCCC
Confidence 358888898877 3332 269999999999999999874 6899987652 2333445667778999999998753
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEE-eCccCcccchhcHH----HHHHHHHC-CcEEEeeccc--cC--CCCCcc
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVF-PVQSRVTGAKYSYQ----WMALAQQN-HWHVLLDAGS--LG--PKDMDS 347 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~-p~vSNvTG~i~PLe----~I~~Are~-G~~VLVDAAQ--~a--G~~mip 347 (872)
+ ++.++|++++.. +++++.+ |.-+|.||+.++.+ ++..|+++ +++++.|-+- +. +.. ..
T Consensus 198 -g-~~~~~l~~~~~~--------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~-~~ 266 (431)
T PRK15481 198 -G-MQPEKLERALAQ--------GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYH-SV 266 (431)
T ss_pred -C-CCHHHHHHHHhc--------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCC-CC
Confidence 3 788999888753 3566555 58999999999985 34567888 9999999762 11 110 11
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
+.. ..+--+++.||-|.||+ =-.+|+++..++.++.+
T Consensus 267 ~~~-~~~~vi~~~SfSK~~~~-GlRiG~~i~~~~~~~~~ 303 (431)
T PRK15481 267 IPQ-TTQRWALIRSVSKALGP-DLRLAFVASDSATSARL 303 (431)
T ss_pred CcC-CCCCEEEEeeeccccCC-CceeEEEeCCHHHHHHH
Confidence 211 12234889999999983 34478877666555444
No 227
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=98.67 E-value=3.2e-07 Score=101.62 Aligned_cols=177 Identities=12% Similarity=0.110 Sum_probs=119.9
Q ss_pred HHHHHHHHHHhcC--------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCC-eEEEecccCchhHHHHHHHHHHcCcEE
Q 002866 199 EHDIKTRIMDHLN--------IPENEYGLVFTVSRGSAFKLLAESYPFHTNK-KLLTMFDYESQSVNWMAQSAKEKGAKV 269 (872)
Q Consensus 199 ieeARerIA~lLg--------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd-~ILT~~DhEHnSVl~~~~~AkrkGaeV 269 (872)
..+.|+.||++++ ++++ .|++|+|+++|+.+++.++- .+|+ .|++.. ++.......++..|+++
T Consensus 68 ~~~Lr~aia~~~~~~~~~~~~v~~~--~I~it~Ga~~al~~~~~~~~-~~g~~~Vlv~~----P~y~~~~~~~~~~g~~~ 140 (374)
T PRK02610 68 HEALKQAIAEYVNESAAGSSQITPA--NISVGNGSDELIRSLLIATC-LGGEGSILVAE----PTFSMYGILAQTLGIPV 140 (374)
T ss_pred hHHHHHHHHHHhCccccccCCCCHH--HEEEcCChHHHHHHHHHHHc-CCCCCeEEEcC----CChHHHHHHHHHcCCEE
Confidence 3579999999998 6665 59999999999987766543 2454 666542 23444556677789999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHHHH--HCCcEEEeeccc--cCCCCC
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQ--QNHWHVLLDAGS--LGPKDM 345 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Ar--e~G~~VLVDAAQ--~aG~~m 345 (872)
..++.+..+..++.++|++++... ...+++++.++.-+|.||+.++.+.+..+. .+++++++|-+- +....
T Consensus 141 ~~~~~~~~~~~~d~~~l~~~~~~~----~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~- 215 (374)
T PRK02610 141 VRVGRDPETFEIDLAAAQSAIEQT----QNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTT- 215 (374)
T ss_pred EEecCCcccCCCCHHHHHHHHHhh----cCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccc-
Confidence 999886534568899998888531 113588888888899999999997655442 248999999983 22221
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
..-.+....-=+++.|+=|.||.+=--+|+++..+++++.+.
T Consensus 216 ~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~ 257 (374)
T PRK02610 216 LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLE 257 (374)
T ss_pred hHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHH
Confidence 111122222226789999999742233788887666655543
No 228
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=98.66 E-value=6e-07 Score=98.74 Aligned_cols=207 Identities=11% Similarity=0.084 Sum_probs=129.1
Q ss_pred ceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 150 KVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
.+.|+.+--. ++|+.+++++.+ .+. .+ ..|..+. ..+.|+.||++++++++ .|++|+|++++
T Consensus 24 ~i~l~~~~n~~~~~~~~~~a~~~-------~~~-~~---~~Y~~~~----~~~Lr~aia~~~~v~~~--~I~it~G~~~~ 86 (360)
T PRK07392 24 ILDFSASINPLGPPESVIAAIQS-------ALS-AL---RHYPDPD----YRELRLALAQHHQLPPE--WILPGNGAAEL 86 (360)
T ss_pred EEEeCCcCCCCCCCHHHHHHHHH-------HHH-Hh---hcCCCcC----HHHHHHHHHHHhCcChh--hEEECCCHHHH
Confidence 5778755332 245666665432 111 11 2355443 24899999999999887 49999999999
Q ss_pred HHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCc-cCHHHHHHHHhhhhccCCCCCceEEEE
Q 002866 229 FKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLK-LCSTDLRKQISSKKRRKKDSAAGLFVF 307 (872)
Q Consensus 229 LnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~-Id~edLe~~I~~~~rr~~~~~T~LVa~ 307 (872)
+.+++..+. +|+.|++.. ++.......++..|+++..+|.+..++. .+..+++.+... ..+++++.+
T Consensus 87 i~~~~~~l~--~g~~vlv~~----P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l 154 (360)
T PRK07392 87 LTWAGRELA--QLRAVYLIT----PAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQ------LTPNDGLLL 154 (360)
T ss_pred HHHHHHHhC--CCCeEEEEC----CCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHh------ccCCCEEEE
Confidence 999998763 577777642 2333455667778999999998643321 012233333321 124789999
Q ss_pred eCccCcccchhcHHH-HHHHHHCCcEEEeecccc--CCCC-Ccc-CC-CCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 308 PVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSL--GPKD-MDS-LG-LSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 308 p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~--aG~~-mip-LD-Ls~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
+.-+|.||..++.+. ...++++++ +++|-+-. .... ..+ +. +....-=+++.|+=|.||.+=--+|+++..++
T Consensus 155 ~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~ 233 (360)
T PRK07392 155 NNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPD 233 (360)
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHH
Confidence 999999999999875 456788886 66688731 1110 001 11 11111127788999999831234788887665
Q ss_pred Ccccc
Q 002866 382 VMGSL 386 (872)
Q Consensus 382 ~i~~L 386 (872)
.++.+
T Consensus 234 ~~~~~ 238 (360)
T PRK07392 234 RLQRW 238 (360)
T ss_pred HHHHH
Confidence 55443
No 229
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.65 E-value=1.9e-07 Score=106.22 Aligned_cols=173 Identities=12% Similarity=0.046 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.++.+.+|+++|++. +...|.|+|.++..++.+. .++||.||+.-. .|-||..-. .-.|+++++++...
T Consensus 66 G~I~eAe~~aA~~fGAd~---t~flvnGsT~g~~a~i~a~-~~~gd~VLv~RN-~HkSv~~al---il~ga~Pvyi~p~~ 137 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADK---TFFLVNGSTSGNQAMIMAL-CRPGDKVLVDRN-CHKSVYNAL---ILSGAIPVYIPPED 137 (417)
T ss_dssp THHHHHHHHHHHHHTESE---EEEESSHHHHHHHHHHHHH-TTTTCEEEEETT---HHHHHHH---HHHTEEEEEEEEEE
T ss_pred cHHHHHHHHHHHhcCCCe---EEEEecCchHHHHHHHHHh-cCCCCEEEEcCC-cHHHHHHHH---HHcCCeEEEecCCc
Confidence 578899999999999975 3666788888888888776 378999988754 678886532 33589999887643
Q ss_pred CC----CccCH-----HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCC--C
Q 002866 277 PT----LKLCS-----TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPK--D 344 (872)
Q Consensus 277 p~----g~Id~-----edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~--~ 344 (872)
+. +.++. ++++++|.+... ....++|+++.- +--|+.++++ +++.+|++++.+|||.|+.+.. .
T Consensus 138 ~~~gi~~~i~~~~~~~~~i~~~l~~~p~---~k~~~~vvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 213 (417)
T PF01276_consen 138 NEYGIIGGISPDEFNEEDIEEALKEHPD---AKAPRLVVLTSP-TYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFH 213 (417)
T ss_dssp -TTS-BEEB-GGGGSHHHHHHHHHHCTT---CHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCS
T ss_pred cccCCccCCChhhhhHHHHHHHHHhCcc---ccCceEEEEeCC-CCCeEEECHHHHHHHhcccCCEEEEEccccccccCC
Confidence 22 23556 889999976421 001356777654 4479999998 5678899999999999976542 1
Q ss_pred CccCCCCCCCCc-------EEEEcccccCCCCCCceEEEEEeCCC
Q 002866 345 MDSLGLSLFRPD-------FIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 345 mipLDLs~l~~D-------Flv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
..+-+-...++| +++-|.||.+++ .+...+|.++.+.
T Consensus 214 ~lp~~a~~~gad~~~~~~~~vvqS~HKtL~a-ltQts~lh~~~~~ 257 (417)
T PF01276_consen 214 PLPRSALALGADRPNDPGIIVVQSTHKTLPA-LTQTSMLHVKGDR 257 (417)
T ss_dssp GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCC
T ss_pred CCccchhhccCccccccceeeeechhhcccc-cccceEEEecCCC
Confidence 123334457899 999999999988 8999999999985
No 230
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=98.65 E-value=3.6e-07 Score=101.36 Aligned_cols=173 Identities=12% Similarity=0.087 Sum_probs=115.3
Q ss_pred HHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.||+++ | +++++ .|+.|+|+++|+.++...+. .+||.|++.. ++.......++..|+++..+|
T Consensus 71 ~~lr~aia~~~~~~~g~~~~~~~-~I~it~Gs~~al~~~~~~l~-~~gd~Vlv~~----P~y~~~~~~~~~~g~~~~~v~ 144 (388)
T PRK07366 71 LDFREAAAQWYEQRFGLAVDPET-EVLPLIGSQEGTAHLPLAVL-NPGDFALLLD----PGYPSHAGGVYLAGGQIYPMP 144 (388)
T ss_pred HHHHHHHHHHHHHhhCCcCCCcC-eEEECCCcHHHHHHHHHHhC-CCCCEEEEcC----CCCcchHHHHHhcCCEEEEEE
Confidence 46888888877 4 55541 49999999999999998874 6899987642 222233345666899999999
Q ss_pred ccCCC-CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccc--c--CCCC
Q 002866 274 FKWPT-LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGS--L--GPKD 344 (872)
Q Consensus 274 vd~p~-g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ--~--aG~~ 344 (872)
++..+ ..++.+++.+.+.. +++++.++.-+|.||..++.+. +..|+++++++++|-+- + .+..
T Consensus 145 ~~~~~~~~~d~~~l~~~~~~--------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (388)
T PRK07366 145 LRAENDFLPVFADIPTEVLA--------QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV 216 (388)
T ss_pred CCCccCCCCCHHHHHHhhcc--------cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC
Confidence 87432 23566677655532 4788888888999999999863 35678999999999772 1 1210
Q ss_pred -Cc-cCCCCCC-CCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 345 -MD-SLGLSLF-RPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 345 -mi-pLDLs~l-~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
.. -.++... ..-+++.|+=|.||.+=--+|.++..+++++.+
T Consensus 217 ~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l 261 (388)
T PRK07366 217 EPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQAL 261 (388)
T ss_pred CCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHH
Confidence 00 0111111 123677899999984223478787666655544
No 231
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.63 E-value=2.2e-07 Score=102.21 Aligned_cols=159 Identities=14% Similarity=0.124 Sum_probs=104.8
Q ss_pred HHHHHHHHhc-------CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 201 DIKTRIMDHL-------NIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 201 eARerIA~lL-------gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
+.|+.|++++ |++++ +|++|+|+++|+.++...+..++||.|++. +..+.... ..++..|+++..++
T Consensus 60 ~lr~~ia~~~~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~-~p~y~~~~---~~~~~~g~~~~~v~ 133 (357)
T TIGR03539 60 ELREAIVDWLERRRGVPGLDPT--AVLPVIGTKELVAWLPTLLGLGPGDTVVIP-ELAYPTYE---VGALLAGATPVAAD 133 (357)
T ss_pred HHHHHHHHHHHHhcCCCCCCcC--eEEEccChHHHHHHHHHHHcCCCCCEEEEC-CCCcHHHH---HHHHhcCCEEeccC
Confidence 4566666666 46565 699999999999998877756889998875 33334333 33456788876542
Q ss_pred ccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc-CCCC---C
Q 002866 274 FKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL-GPKD---M 345 (872)
Q Consensus 274 vd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~-aG~~---m 345 (872)
+.+. +.. .+++++.++..+|.||..+|.+ +++.|+++|+++++|.+.. ...+ +
T Consensus 134 --------~~~~----l~~-------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 194 (357)
T TIGR03539 134 --------DPTE----LDP-------VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPV 194 (357)
T ss_pred --------Chhh----cCc-------cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCc
Confidence 1121 211 2588999999999999999975 3456799999999999853 1110 0
Q ss_pred ccCCCC----CCCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccc
Q 002866 346 DSLGLS----LFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSL 386 (872)
Q Consensus 346 ipLDLs----~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L 386 (872)
..++.. ...--+++.|+.|.||. | | +|.++..++.++.+
T Consensus 195 ~~~~~~~~~~~~~~vi~~~S~SK~~~~-~-G~R~G~~i~~~~~~~~~ 239 (357)
T TIGR03539 195 SILDPRVCGGDHTGLLAVHSLSKRSNL-A-GYRAGFVAGDPALVAEL 239 (357)
T ss_pred cceecccCCCccccEEEEeccccccCC-C-ceeEEEEecCHHHHHHH
Confidence 011110 01224788899999875 3 6 68887666555443
No 232
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.63 E-value=3.8e-06 Score=99.90 Aligned_cols=214 Identities=15% Similarity=0.052 Sum_probs=137.1
Q ss_pred eecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHH
Q 002866 151 VCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFK 230 (872)
Q Consensus 151 IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALn 230 (872)
-|+-|--+.+.++.++-.+. .+.-|......-..|.+..+..++=+-+++++|.++. .=+||+|+|+|.-
T Consensus 85 ry~ghm~~~~~~paila~~~--------a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~--~G~~TsGGT~ANl 154 (608)
T TIGR03811 85 RYWGHMNSETLMPAILAYNY--------AMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG--WGHIVADGSLANL 154 (608)
T ss_pred ceEEECcCCCCHHHHHHHHH--------HHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC--CeEEeCChHHHHH
Confidence 57777777777766654321 1111211111124555567788889999999998753 2469999999855
Q ss_pred H---HHhh---CCC--C-------------------------------------------CCC------eEEEecccCch
Q 002866 231 L---LAES---YPF--H-------------------------------------------TNK------KLLTMFDYESQ 253 (872)
Q Consensus 231 L---Vaes---lpf--~-------------------------------------------~Gd------~ILT~~DhEHn 253 (872)
. +|+. +|+ + .|. .++++ +.-|-
T Consensus 155 ~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s-~~aHy 233 (608)
T TIGR03811 155 EGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVP-QTKHY 233 (608)
T ss_pred HHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEEC-CCccH
Confidence 3 3432 221 0 000 23444 33455
Q ss_pred hHHHHHHHHHHcCc---EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHH---
Q 002866 254 SVNWMAQSAKEKGA---KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALA--- 326 (872)
Q Consensus 254 SVl~~~~~AkrkGa---eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~A--- 326 (872)
|+. +.|.-.|+ .|+.||++. +++++.+.|++.|....+ ....+-.|+-++-+-.+|.+=||+.| ..+
T Consensus 234 S~~---KAa~ilGlG~~~vv~VpvD~-~~rmd~~~L~~~I~~~~~--~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~ 307 (608)
T TIGR03811 234 SWL---KAADIIGIGLDQVIPVPVDS-NYRMDINELEKIIRKLAA--EKTPILGVVGVVGSTEEGAVDGIDKIVALRNKL 307 (608)
T ss_pred HHH---HHHHHcCCCcccEEEeecCC-CCcCCHHHHHHHHHHHHh--cCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHH
Confidence 553 44555677 588999986 689999999999975422 22234556667888899999999855 444
Q ss_pred HHCCc--EEEeeccccCCC-CC--------ccCC------------------CC---------CCCCcEEEEcccccCCC
Q 002866 327 QQNHW--HVLLDAGSLGPK-DM--------DSLG------------------LS---------LFRPDFIITSFYRVFGF 368 (872)
Q Consensus 327 re~G~--~VLVDAAQ~aG~-~m--------ipLD------------------Ls---------~l~~DFlv~S~HK~fG~ 368 (872)
+++|+ ++|||||-.+-. .+ +|.+ ++ --.+|-+++.+|||+..
T Consensus 308 ~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~ 387 (608)
T TIGR03811 308 MKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYI 387 (608)
T ss_pred HHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCccccccc
Confidence 56786 699999954310 00 0110 11 13699999999999877
Q ss_pred CCCceEEEEEeCCC
Q 002866 369 DPTGFGCLLIKKSV 382 (872)
Q Consensus 369 ~PtGvG~LyVRk~~ 382 (872)
|.++|+|++|+..
T Consensus 388 -Py~~G~ll~Rd~~ 400 (608)
T TIGR03811 388 -PYSAGGIVIQDIR 400 (608)
T ss_pred -CCCeEEEEEeCHH
Confidence 9999999999874
No 233
>PRK08636 aspartate aminotransferase; Provisional
Probab=98.62 E-value=7e-07 Score=99.94 Aligned_cols=181 Identities=13% Similarity=0.126 Sum_probs=114.9
Q ss_pred HHHHHHHHHhc----CCCCCCC-cEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec
Q 002866 200 HDIKTRIMDHL----NIPENEY-GLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 200 eeARerIA~lL----gA~~dEY-~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv 274 (872)
...|+.||+++ |.+.+.. .|++|+|+++|+.+++..+. .+||.|++.. ++.......++..|+++..+|+
T Consensus 74 ~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~----P~y~~~~~~~~~~g~~~~~v~~ 148 (403)
T PRK08636 74 YKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAIT-NPGDVAIVPD----PAYPIHSQAFILAGGNVHKMPL 148 (403)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhC-CCCCEEEEcC----CCCcchHHHHHhcCCEEEEEec
Confidence 36777777776 6432222 49999999999999999884 7899987652 1222334456668999999988
Q ss_pred cC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc-C---CCCC
Q 002866 275 KW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL-G---PKDM 345 (872)
Q Consensus 275 d~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~-a---G~~m 345 (872)
+. .+..++.+.+.+.+....+ ...++++++.++.-+|.||..+|.+ +++.|++++++++.|-+-. . +...
T Consensus 149 ~~~~~~~~d~~~l~~~l~~~~~-~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~ 227 (403)
T PRK08636 149 EYNEDFELDEDQFFENLEKALR-ESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKT 227 (403)
T ss_pred cccccCccChhhhhhHHHHHHh-hccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCC
Confidence 53 2245777755433322110 1124688888887789999999995 3466799999999998822 1 2100
Q ss_pred cc-CCCCCC-CCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 346 DS-LGLSLF-RPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 346 ip-LDLs~l-~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
.+ ..+... ..-+++.|+-|.||.+=--+|+++..++++..+
T Consensus 228 ~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~ 270 (403)
T PRK08636 228 PSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGAL 270 (403)
T ss_pred CChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHHHH
Confidence 01 112111 122456799999974223478877665555444
No 234
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.61 E-value=2.7e-07 Score=101.51 Aligned_cols=161 Identities=15% Similarity=0.097 Sum_probs=105.2
Q ss_pred HHHHHHHHhc----C---CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 201 DIKTRIMDHL----N---IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 201 eARerIA~lL----g---A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
+.|+.||+++ | ++++ +|++|+|+++|+.+++..+..++|+.|++..- .+... ...++..|+++..++
T Consensus 66 ~lr~~ia~~l~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p-~y~~~---~~~~~~~g~~~~~~~ 139 (364)
T PRK07865 66 ELREAIVGWLARRRGVTGLDPA--AVLPVIGSKELVAWLPTLLGLGPGDVVVIPEL-AYPTY---EVGARLAGATVVRAD 139 (364)
T ss_pred HHHHHHHHHHHHHcCCCCCCcc--cEEEccChHHHHHHHHHHHcCCCCCEEEECCC-CcccH---HHHHHhcCCEEEecC
Confidence 5677888877 4 5565 59999999999999887775678999887532 22323 333455788887653
Q ss_pred ccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC-CCCCccC
Q 002866 274 FKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG-PKDMDSL 348 (872)
Q Consensus 274 vd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a-G~~mipL 348 (872)
. .+++.. .+++++.++..+|.||.+++.+ +++.|+++|+++++|.+..- ..+--++
T Consensus 140 ~--------~~~l~~-----------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 200 (364)
T PRK07865 140 S--------LTELGP-----------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPV 200 (364)
T ss_pred C--------hhhCCc-----------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCC
Confidence 1 122211 2478888888999999999975 34567899999999999431 1100011
Q ss_pred C-CC------CCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 349 G-LS------LFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 349 D-Ls------~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
. +. ...--+++.|+-|.||.+=..+|+++..++.++.+
T Consensus 201 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~ 245 (364)
T PRK07865 201 SILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAEL 245 (364)
T ss_pred ccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHH
Confidence 1 10 11234899999999974112378777666555444
No 235
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.61 E-value=1.7e-06 Score=97.92 Aligned_cols=209 Identities=16% Similarity=0.147 Sum_probs=134.0
Q ss_pred CceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----C--CCCCCCcEEE
Q 002866 149 PKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----N--IPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----g--A~~dEY~VVF 221 (872)
..|.|.-|--. +.|+.+++++.+ .+. +. ...|. |.. -+.+.|+.||+++ | .++++ +|+.
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~-------a~~-~~--~~~Y~-~~~--G~~~LReaia~~~~~~~~~~~~~~~-eiiv 94 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIE-------ALE-EG--GTHYT-PSA--GIPELREAIAEKYKRRYGLDVDPEE-EIIV 94 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHH-------HHh-cc--cCCCC-CCC--CCHHHHHHHHHHHHHHhCCCCCCCC-eEEE
Confidence 46778766554 456777776432 111 10 01233 321 2234555555443 4 33332 4999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC--CCCccCHHHHHHHHhhhhccCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW--PTLKLCSTDLRKQISSKKRRKKD 299 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~--p~g~Id~edLe~~I~~~~rr~~~ 299 (872)
|.|+++|+.++..++ ..+||+||+..- ...+.. ...+-.|+++..++++. .+..++.++|++++..
T Consensus 95 t~Ga~~al~~~~~a~-~~pGDeVlip~P-~Y~~y~---~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~------- 162 (393)
T COG0436 95 TAGAKEALFLAFLAL-LNPGDEVLIPDP-GYPSYE---AAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP------- 162 (393)
T ss_pred eCCHHHHHHHHHHHh-cCCCCEEEEeCC-CCcCHH---HHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-------
Confidence 999999999999887 478999876531 122233 33445799999999743 2567899999998864
Q ss_pred CCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecc-ccCCCCC-ccCCCCCCCC----cEEEEcccccCCCC
Q 002866 300 SAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAG-SLGPKDM-DSLGLSLFRP----DFIITSFYRVFGFD 369 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAA-Q~aG~~m-ipLDLs~l~~----DFlv~S~HK~fG~~ 369 (872)
+|+++++..=+|.||++++-+ ++..|++++++++.|-+ .-.-.+- .+..+-.+.. =+.+-|+=|.|+.
T Consensus 163 -ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~m- 240 (393)
T COG0436 163 -KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGM- 240 (393)
T ss_pred -cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccc-
Confidence 599999999999999999975 34667999999999988 3222210 0111222222 3556699998884
Q ss_pred CCc--eEEEEEe-CCCcccc
Q 002866 370 PTG--FGCLLIK-KSVMGSL 386 (872)
Q Consensus 370 PtG--vG~LyVR-k~~i~~L 386 (872)
+| +|.++.. +.+++.+
T Consensus 241 -tGwRvG~~v~~~~~l~~~~ 259 (393)
T COG0436 241 -TGWRIGWVVGPPEELIAAL 259 (393)
T ss_pred -cccceeEeecChHHHHHHH
Confidence 45 8888877 4444433
No 236
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=98.60 E-value=7.7e-07 Score=99.29 Aligned_cols=168 Identities=15% Similarity=0.101 Sum_probs=112.7
Q ss_pred HHHHHHHHHhcC------CCCCCCcEEEeCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 200 HDIKTRIMDHLN------IPENEYGLVFTVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 200 eeARerIA~lLg------A~~dEY~VVFTsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
.+.|+.||+++. +++++-.|+.|+|+++|+.+++..+. ..+||.|++.. +........++..|++++.+
T Consensus 72 ~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~----P~y~~~~~~~~~~g~~~v~v 147 (396)
T PRK09257 72 AAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSD----PTWPNHRAIFEAAGLEVKTY 147 (396)
T ss_pred HHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECC----CCcccHHHHHHHcCCcEEEE
Confidence 468888888763 24442123999999999999987664 37899987652 22223345566789999999
Q ss_pred ec-cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecc-ccCCCC--
Q 002866 273 WF-KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAG-SLGPKD-- 344 (872)
Q Consensus 273 pv-d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAA-Q~aG~~-- 344 (872)
|. +.++..++.+.+++.+... .+++.++.++..+|.||+.++.+. +..|++++++++.|-+ +-...+
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~~-----~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~ 222 (396)
T PRK09257 148 PYYDAATKGLDFDAMLADLSQA-----PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLE 222 (396)
T ss_pred eccccccCccCHHHHHHHHHhC-----CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchH
Confidence 87 3223468999998887631 234688888999999999999863 4567899999999987 222110
Q ss_pred --CccC-CCCCCC-CcEEEEcccccCCCCCCc--eEEEEE
Q 002866 345 --MDSL-GLSLFR-PDFIITSFYRVFGFDPTG--FGCLLI 378 (872)
Q Consensus 345 --mipL-DLs~l~-~DFlv~S~HK~fG~~PtG--vG~LyV 378 (872)
..++ .+.... -=+++.|+=|.|+ |.| +|++++
T Consensus 223 ~~~~~~~~~~~~~~~vi~i~SfSK~~~--~~GlRiG~~~~ 260 (396)
T PRK09257 223 EDAYGLRAFAAAGLELLVASSFSKNFG--LYGERVGALSV 260 (396)
T ss_pred HHHHHHHHHHhcCCcEEEEEEcCCcCc--cccccceeEEE
Confidence 0000 011111 1277899999988 445 676764
No 237
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=98.57 E-value=4.6e-07 Score=103.81 Aligned_cols=174 Identities=14% Similarity=0.034 Sum_probs=113.4
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc---
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK--- 275 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd--- 275 (872)
+.+..+++++++|.+ .+++|+++|.|++++. .+-.++||.|.+ ..|- .+.. ...+..|+.+.-++.+
T Consensus 73 ~~~lE~~va~~~G~~----~av~v~sGT~Al~ll~-~l~l~pGDeVps-n~~f-~Tt~---ahIe~~Gav~vDi~~dea~ 142 (450)
T TIGR02618 73 FYHLERTVRELYGFK----YVVPTHQGRGAENLLS-QIAIKPGDYVPG-NMYF-TTTR---YHQEKNGATFVDIIIDEAH 142 (450)
T ss_pred HHHHHHHHHHHHCCC----eEEEcCCHHHHHHHHH-HhCCCCcCEECC-ceeH-HHHH---HHHHhCCeEEEeeeccccc
Confidence 456777899999985 2999999999999875 555789997632 1110 1111 1124467755555332
Q ss_pred ------CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcc-cchhcHH---HH-HHHHHCCcEEEeeccccCCCC
Q 002866 276 ------WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVT-GAKYSYQ---WM-ALAQQNHWHVLLDAGSLGPKD 344 (872)
Q Consensus 276 ------~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvT-G~i~PLe---~I-~~Are~G~~VLVDAAQ~aG~~ 344 (872)
..++.+++++|+++|..+ ...++.++++....|.. |...|+. .+ ..|+++|+.|++|||++++..
T Consensus 143 ~~~~~~p~~GniD~~~Le~aI~~~----~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA 218 (450)
T TIGR02618 143 DAQLNIPFKGNVDLKKLQKLIDEV----GADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENA 218 (450)
T ss_pred ccccCCCCCCCcCHHHHHHHhccc----cCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhCh
Confidence 124788999999999742 11245677777777766 7887753 33 467999999999999988531
Q ss_pred Cc-------cCCCCC--------CCCcEEEEcccccCCCCCCceEEEEE-eC-CCcccccCC
Q 002866 345 MD-------SLGLSL--------FRPDFIITSFYRVFGFDPTGFGCLLI-KK-SVMGSLQNQ 389 (872)
Q Consensus 345 mi-------pLDLs~--------l~~DFlv~S~HK~fG~~PtGvG~LyV-Rk-~~i~~L~P~ 389 (872)
.. -.|.+- -.+|.+++|+||-++. |. |.+++ +. +++..++..
T Consensus 219 ~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~-~~--GG~l~~~d~~l~~k~r~~ 277 (450)
T TIGR02618 219 YFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLV-NI--GGFLCMNDDEMFQSAKEL 277 (450)
T ss_pred hhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCC-CC--ceEEEeCCHHHHHHHHHH
Confidence 00 112111 1589999999999888 65 44444 44 455554433
No 238
>PRK07505 hypothetical protein; Provisional
Probab=98.57 E-value=1.6e-06 Score=96.96 Aligned_cols=206 Identities=10% Similarity=0.084 Sum_probs=121.1
Q ss_pred CCceecccCCCCCC----cHHHHHHhhhcccccHHHHHHhhccCcCcCCC---chHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGFGLF----SYIQTLHYWESSTFSLSEITANLSNHALYGGA---EKGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAtgp~----p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNp---sS~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++..|||.++.+.+ .+.+++++.+ .+. ... +..++.. ...+..++.+++|+++++. + .++
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~-------~l~-~~g-~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~--~~~ 110 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVD-------ALK-RTG-SLHLSSSRTRVRSQILKDLEEALSELFGA--S--VLT 110 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHH-------HHH-HhC-CCCCCccchhhhhHHHHHHHHHHHHHhCC--C--EEE
Confidence 35789999877665 5777777543 121 110 0011111 1235778999999999997 3 355
Q ss_pred EeCCHHHHHHHHH----hhCCCCCCCe-EEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhc
Q 002866 221 FTVSRGSAFKLLA----ESYPFHTNKK-LLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKR 295 (872)
Q Consensus 221 FTsnATeALnLVa----eslpf~~Gd~-ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~r 295 (872)
|++| ++|...++ .++ +.+|+. +++.....|.++..+....+ .+.+++.+|.. +.+++++++..
T Consensus 111 ~~sG-~~a~~~ai~~~~~~~-~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~~~------d~~~l~~~~~~--- 178 (402)
T PRK07505 111 FTSC-SAAHLGILPLLASGH-LTGGVPPHMVFDKNAHASLNILKGICA-DETEVETIDHN------DLDALEDICKT--- 178 (402)
T ss_pred ECCh-HHHHHHHHHHHHhcc-cCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeCCC------CHHHHHHHHhc---
Confidence 6655 55544333 222 222443 55544456777654333232 46777777642 57888887743
Q ss_pred cCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccC---C-CC-Cc---cCCCCCCCCcEEEEcccccC
Q 002866 296 RKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLG---P-KD-MD---SLGLSLFRPDFIITSFYRVF 366 (872)
Q Consensus 296 r~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~a---G-~~-mi---pLDLs~l~~DFlv~S~HK~f 366 (872)
+++++.+..-+|.||.+.|++.+ +.|+++|+.+++|.+|.. | .. +. .+++...+..+++.|+=|.|
T Consensus 179 -----~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~ 253 (402)
T PRK07505 179 -----NKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAF 253 (402)
T ss_pred -----CCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhh
Confidence 35677777778899999999754 577999999999999843 1 10 01 11210112346667899988
Q ss_pred CCCCCceEEEEE-eCCCcccc
Q 002866 367 GFDPTGFGCLLI-KKSVMGSL 386 (872)
Q Consensus 367 G~~PtGvG~LyV-Rk~~i~~L 386 (872)
|. + | |++.+ .++.++.+
T Consensus 254 ~~-~-G-g~~~~~~~~~~~~~ 271 (402)
T PRK07505 254 GA-S-G-GVIMLGDAEQIELI 271 (402)
T ss_pred hc-c-C-eEEEeCCHHHHHHH
Confidence 85 2 4 55544 33444433
No 239
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=98.57 E-value=2e-06 Score=95.83 Aligned_cols=171 Identities=10% Similarity=0.009 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC--------CCCC-CeEEEecccCchhHHHHHHHH-----
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP--------FHTN-KKLLTMFDYESQSVNWMAQSA----- 262 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp--------f~~G-d~ILT~~DhEHnSVl~~~~~A----- 262 (872)
....+.-++++++++.+ .++|+.++|+|+..++.... ..+| ++|++..+--|..........
T Consensus 83 ~~~~~l~~~l~~~~~~~----~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~ 158 (401)
T PRK00854 83 DQLAPLYEELAALTGSH----KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDA 158 (401)
T ss_pred HHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccc
Confidence 35566777888988752 49999999998887665431 1133 466655442355443322110
Q ss_pred ----HHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEE
Q 002866 263 ----KEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHV 333 (872)
Q Consensus 263 ----krkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~V 333 (872)
...+..+..+|. .+.++|++.|.. ++++|.+.++.|.+|.++| ++. .+.|+++|+++
T Consensus 159 ~~~~~~~~~~~~~~~~------~d~~~le~~i~~--------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~l 224 (401)
T PRK00854 159 RGGFGPFTPGFRVVPF------GDAEALEAAITP--------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTL 224 (401)
T ss_pred cccCCCCCCCeEEeCC------CCHHHHHHHhCC--------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 000122333332 256888877742 5899999999999999998 764 46789999999
Q ss_pred Eeecccc-CCCCC--ccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 334 LLDAGSL-GPKDM--DSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 334 LVDAAQ~-aG~~m--ipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++|.+|. +|..- ...+.....+|+++++ |++++.-.-+|++..+++.++.+.
T Consensus 225 I~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~~~~~l~ 279 (401)
T PRK00854 225 ILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSEVLGVLK 279 (401)
T ss_pred EEechhhCCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHHHHhccc
Confidence 9999987 54310 0012233568999987 987741012677887777766553
No 240
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.56 E-value=7.4e-07 Score=100.24 Aligned_cols=209 Identities=17% Similarity=0.107 Sum_probs=133.7
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAF 229 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeAL 229 (872)
.|-.=+-|-+++++.+++++.+ ......+-.++-++ ....++.+.....+.++.-.+ .++.+.|.+.|+
T Consensus 28 ~v~~t~lG~s~~~~e~iea~~~--------~~~~~v~Le~~l~~--g~~~~R~~~~~~~~~~~~~ae-a~~ivnnn~aAV 96 (395)
T COG1921 28 TVLMTNLGRSLYSPEAIEAMKE--------AMRAPVELETDLKT--GKRGARLTELAELLCGLTGAE-AAAIVNNNAAAV 96 (395)
T ss_pred hheeccCCCccCCHHHHHHHHH--------Hhcccceeeeeccc--chhhHHHHHHHHHHhcccchh-heeeECCcHHHH
Confidence 4555667888888888887532 11111110111111 223333333333344554322 577788888888
Q ss_pred HHHHhhCCCCCCCeEEEeccc----CchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEE
Q 002866 230 KLLAESYPFHTNKKLLTMFDY----ESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLF 305 (872)
Q Consensus 230 nLVaeslpf~~Gd~ILT~~Dh----EHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LV 305 (872)
-++..++. .+.+++..+-+ .|..|.. ..+.-|+++..+- . ..+-+..+++.+|.. +|.+.
T Consensus 97 ll~~~al~--~~~EvVis~g~lV~gg~~~v~d---~~~~aG~~l~EvG--~-tn~t~~~d~~~AIne--------~ta~l 160 (395)
T COG1921 97 LLTLNALA--EGKEVVVSRGELVEGGAFRVPD---IIRLAGAKLVEVG--T-TNRTHLKDYELAINE--------NTALL 160 (395)
T ss_pred HHHHhhhc--cCCeEEEEccccccCCCCChhH---HHHHcCCEEEEec--c-cCcCCHHHHHHHhcc--------CCeeE
Confidence 88887765 35565544422 2344543 4455688887653 2 456788899988864 47777
Q ss_pred EEeCccCcccch--hcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCC---CCCCcEEEEcccccCCCCCCceEEEEEe
Q 002866 306 VFPVQSRVTGAK--YSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLS---LFRPDFIITSFYRVFGFDPTGFGCLLIK 379 (872)
Q Consensus 306 a~p~vSNvTG~i--~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs---~l~~DFlv~S~HK~fG~~PtGvG~LyVR 379 (872)
-..|-+|. |.. .|++ .+..||++|+.|++|+++...-+ ...++. +.++|.+++|++|+||+ |+ .|++.-|
T Consensus 161 lkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~-~e~~l~~~la~GaDLV~~SgdKllgG-Pq-aGii~Gk 236 (395)
T COG1921 161 LKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVD-KEPDLREALALGADLVSFSGDKLLGG-PQ-AGIIVGK 236 (395)
T ss_pred EEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccc-cccchhHHHhcCCCEEEEecchhcCC-Cc-cceEech
Confidence 66677764 443 3344 57889999999999999755311 123333 36899999999999999 88 8999999
Q ss_pred CCCcccccCC
Q 002866 380 KSVMGSLQNQ 389 (872)
Q Consensus 380 k~~i~~L~P~ 389 (872)
|++++.++..
T Consensus 237 KelI~~lq~~ 246 (395)
T COG1921 237 KELIEKLQSH 246 (395)
T ss_pred HHHHHHHHhh
Confidence 9999888764
No 241
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.53 E-value=6.8e-07 Score=101.35 Aligned_cols=169 Identities=12% Similarity=0.027 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEE-eCCHHHHHHHHHhhCCCCCCCeEEEec-cc-CchhHHHHHHH----HHHcCcEE
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVF-TVSRGSAFKLLAESYPFHTNKKLLTMF-DY-ESQSVNWMAQS----AKEKGAKV 269 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVF-TsnATeALnLVaeslpf~~Gd~ILT~~-Dh-EHnSVl~~~~~----AkrkGaeV 269 (872)
++..-+.+++.++||+++++|.+-+ .-+++.|...|..++- ++||.|+... .+ .|-+--..... +..+..++
T Consensus 66 ~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl-~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~ 144 (399)
T PF00464_consen 66 EIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALL-KPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFES 144 (399)
T ss_dssp HHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT--TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEE
T ss_pred HHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHH-hhcCcEEecChhhcccccccccccccccccccceEEE
Confidence 5566699999999999877654443 3677788888888874 8999987543 21 12211111111 12234678
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHH-HHHHCCcEEEeeccccCCC---CC
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMA-LAQQNHWHVLLDAGSLGPK---DM 345 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~-~Are~G~~VLVDAAQ~aG~---~m 345 (872)
...+++..++.||.+++++++... +.+|+.+...+ .=..+|++.++ .|++.|+++++|++|.+|. .+
T Consensus 145 ~~y~~d~~~~~ID~d~l~~~a~~~-------kPklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~ 215 (399)
T PF00464_consen 145 VPYPVDPDTGLIDYDELEKLAKEH-------KPKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGL 215 (399)
T ss_dssp EEEEB-TTTSSB-HHHHHHHHHHH---------SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS
T ss_pred EeeeeecCCCeECHHHHHHHHhhc-------CCCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehhe
Confidence 888898778999999999998765 47788887644 33456677664 6789999999999996431 01
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIK 379 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVR 379 (872)
.|=.+. .+|++++|.||.|.+ |.| |+++.+
T Consensus 216 ~~~P~~--~ADvvt~sThKtl~G-Prg-giI~~~ 245 (399)
T PF00464_consen 216 FPNPFP--YADVVTGSTHKTLRG-PRG-GIILTN 245 (399)
T ss_dssp S--GCC--TSSEEEEESSGGG-S-SS--EEEEES
T ss_pred ecCccc--cceEEEeeccccccc-cCc-eEEEEc
Confidence 222232 389999999999888 887 887778
No 242
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.51 E-value=1.8e-06 Score=96.09 Aligned_cols=167 Identities=11% Similarity=0.059 Sum_probs=125.8
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecc-cCchhHHHHHHHHHHcCcE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFD-YESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~D-hEHnSVl~~~~~AkrkGae 268 (872)
..||.. +..-+|||.+=|--. -+.|+++..|+-+++..+. ++||+||+... |- .+..-+....++.|++
T Consensus 59 i~NPT~----~vlE~RiAaLEGG~a----a~a~aSG~AA~~~ai~~la-~aGD~iVss~~LYG-GT~~lf~~tl~~~Gi~ 128 (426)
T COG2873 59 IMNPTT----DVLEERIAALEGGVA----ALAVASGQAAITYAILNLA-GAGDNIVSSSKLYG-GTYNLFSHTLKRLGIE 128 (426)
T ss_pred ccCchH----HHHHHHHHHhhcchh----hhhhccchHHHHHHHHHhc-cCCCeeEeeccccC-chHHHHHHHHHhcCcE
Confidence 467753 334567888877532 3567888888888887774 78999986543 32 3444445557889999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
|+++..+ +++.++++|.. +||+|-+-...|.-+.+.|++. ...||++|+.++||-+-..|. -
T Consensus 129 v~fvd~~------d~~~~~~aI~~--------nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpy---l 191 (426)
T COG2873 129 VRFVDPD------DPENFEAAIDE--------NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPY---L 191 (426)
T ss_pred EEEeCCC------CHHHHHHHhCc--------ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcce---e
Confidence 9998643 47889888864 6999999999999999999995 567899999999999966654 2
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVM 383 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i 383 (872)
+.--++++|.++-|.-||.|+.-+.+|..+|.....
T Consensus 192 ~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~F 227 (426)
T COG2873 192 CRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKF 227 (426)
T ss_pred cchhhcCCCEEEEeecccccCCccccceEEEeCCcc
Confidence 333357999999999999887556688888776654
No 243
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.49 E-value=2.9e-06 Score=97.67 Aligned_cols=218 Identities=13% Similarity=0.054 Sum_probs=131.1
Q ss_pred HHHHHhhccc--CCC-Cceeccc---CCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcC-CCchHHHHHHHHHHHHH
Q 002866 136 IDQLRANEYL--HLS-PKVCLDY---CGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYG-GAEKGTVEHDIKTRIMD 208 (872)
Q Consensus 136 ID~lR~~EFP--~L~-~~IYLDy---AAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg-NpsS~~~ieeARerIA~ 208 (872)
...|.+..|- .|+ ..||.|- .+|++++..|+.+++- . ...|+ .|+ +.+..+++++
T Consensus 28 ~~~l~~ag~n~f~l~~~~v~IDLlSDS~T~aMs~~q~a~~~v-------------G-Dd~Yagd~s----~~~LE~~vAe 89 (460)
T PRK13237 28 EAAMKEAGYNTFLLRSEDVYIDLLTDSGTNAMSDRQWAGMMI-------------G-DEAYAGSRN----FYHLEETVQE 89 (460)
T ss_pred HHHHHHcCCCcccCCcCcEEEECcccCCchhccHHHHHHHhh-------------c-chhhcCCCc----HHHHHHHHHH
Confidence 3444444452 222 3677774 4556667666554311 1 12344 344 3466778999
Q ss_pred hcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec---------cCCCC
Q 002866 209 HLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF---------KWPTL 279 (872)
Q Consensus 209 lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv---------d~p~g 279 (872)
++|.+ .+|+|+++|.|++++ ..+-.++|+.| +...+ +..........|+.+.-+.. +..++
T Consensus 90 ~lG~e----~aV~v~sGTaAl~ll-~~l~v~pGd~V-p~n~~----f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tg 159 (460)
T PRK13237 90 YYGFK----HVVPTHQGRGAENLL-SRIAIKPGQYV-PGNMY----FTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKG 159 (460)
T ss_pred HHCCC----eEEEeCCHHHHHHHH-HHhCCCCcCEE-CCccc----hHhhHHHHHhCCcEEEeeecccccccccCCCCCC
Confidence 99985 289999999999986 44556789865 22111 11111112445774443321 12257
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcc-cchhcH---HH-HHHHHHCCcEEEeeccccCCCCC-c-------
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVT-GAKYSY---QW-MALAQQNHWHVLLDAGSLGPKDM-D------- 346 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvT-G~i~PL---e~-I~~Are~G~~VLVDAAQ~aG~~m-i------- 346 (872)
.+|+++|+++|..+ ...+++|+++....|.. |...|+ +. ...|+++|+.|++|||++++... |
T Consensus 160 nlD~d~Le~~I~~~----~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y 235 (460)
T PRK13237 160 NVDLDKLQALIDEV----GAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGY 235 (460)
T ss_pred CcCHHHHHHHhccc----cCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhccccccc
Confidence 89999999999742 12457788877777887 677654 43 35679999999999999887210 0
Q ss_pred -cCCCC------CCCCcEEEEcccccCCCCCCceEEEEEeCC-Cccccc
Q 002866 347 -SLGLS------LFRPDFIITSFYRVFGFDPTGFGCLLIKKS-VMGSLQ 387 (872)
Q Consensus 347 -pLDLs------~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~-~i~~L~ 387 (872)
.-.+. -...|.+++|+||-++. |. =|++..+.+ +.+.++
T Consensus 236 ~~~~i~ei~~e~~s~aD~~t~S~~K~~~~-~~-GG~i~t~D~eL~~~~r 282 (460)
T PRK13237 236 QDKSIKEIVHEMFSYADGCTMSGKKDCLV-NI-GGFLAMNDEELFDEAK 282 (460)
T ss_pred CCCcHhHHhhhccCcCcEEEEeCCCCCCC-CC-ceEEEECCHHHHHHHH
Confidence 11111 12489999999998876 43 255555553 334433
No 244
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=98.49 E-value=3.1e-06 Score=97.05 Aligned_cols=171 Identities=13% Similarity=0.171 Sum_probs=114.3
Q ss_pred HHHHHHHHHhcC--------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEE
Q 002866 200 HDIKTRIMDHLN--------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYS 271 (872)
Q Consensus 200 eeARerIA~lLg--------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~ 271 (872)
...|+.||++++ ++++ .|++|+|+|+|+.+++..+. .+||.|++..-+ ++.... ....+.|+++..
T Consensus 98 ~~LR~aiA~~l~~~~~~~~~v~p~--~Ivit~G~t~al~~l~~~l~-~pGD~Vlv~~P~-Y~~f~~--~~~~~~g~~vv~ 171 (447)
T PLN02607 98 KSFRQAMASFMEQIRGGKARFDPD--RIVLTAGATAANELLTFILA-DPGDALLVPTPY-YPGFDR--DLRWRTGVKIVP 171 (447)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCHH--HeEEcCChHHHHHHHHHHhC-CCCCEEEEcCCC-CcchHH--HHHhcCCcEEEE
Confidence 468888888875 4554 69999999999999998874 789998865321 122221 112246899988
Q ss_pred EeccCCC-CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC---C-
Q 002866 272 AWFKWPT-LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG---P- 342 (872)
Q Consensus 272 Vpvd~p~-g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a---G- 342 (872)
++++..+ ..++.+++++++...++ .+.+++++.++.-+|.||..+|-+ ++..|+++++++++|-+-+. +
T Consensus 172 v~~~~~~~f~~~~~~le~a~~~a~~--~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~ 249 (447)
T PLN02607 172 IHCDSSNNFQVTPQALEAAYQEAEA--ANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA 249 (447)
T ss_pred EeCCCCCCCcCCHHHHHHHHHHHHH--hCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC
Confidence 8876432 35788999988864321 234688899999999999999975 34667899999999998332 1
Q ss_pred CCCccC-CC-CCCC----Cc--EEEEcccccCCCCCCceEEEEE
Q 002866 343 KDMDSL-GL-SLFR----PD--FIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 343 ~~mipL-DL-s~l~----~D--Flv~S~HK~fG~~PtGvG~LyV 378 (872)
....++ .+ ...+ .+ .++-|+-|-||.+-.-+|+++.
T Consensus 250 ~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs 293 (447)
T PLN02607 250 SEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYS 293 (447)
T ss_pred CCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEE
Confidence 000010 00 0111 12 4667899988842233688876
No 245
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=98.49 E-value=2.4e-06 Score=94.92 Aligned_cols=208 Identities=11% Similarity=0.026 Sum_probs=127.3
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc-hHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE-KGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps-S~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++..|||..+. +-.++.+++++.+. + ..+ .+..+. ....++.+++.++++++.+ .++
T Consensus 29 dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~-------~-~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~ 92 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQGHCHPKILAALINQ-------A-QKL----TLTSRAFYNDVLGLAEKYITDLFGYD----KVL 92 (400)
T ss_pred CCCEEEEcccCHhhccCCcCCHHHHHHHHHH-------H-Hhc----ccccccccCHHHHHHHHHHHhCCCCC----EEE
Confidence 45678888643 12467777765431 1 111 111111 1246788999999988752 489
Q ss_pred EeCCHHHHHHHHHhhCC--------C-CCCCeEEEecccCchhHHHHHHHHHHcCc---------EEEEEeccCCCCccC
Q 002866 221 FTVSRGSAFKLLAESYP--------F-HTNKKLLTMFDYESQSVNWMAQSAKEKGA---------KVYSAWFKWPTLKLC 282 (872)
Q Consensus 221 FTsnATeALnLVaeslp--------f-~~Gd~ILT~~DhEHnSVl~~~~~AkrkGa---------eV~~Vpvd~p~g~Id 282 (872)
|+.++|+|+..+..... + ..+++||+...--|............... .+..++ . .+
T Consensus 93 ~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~d 166 (400)
T PTZ00125 93 PMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVD--Y----ND 166 (400)
T ss_pred EeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeC--C----CC
Confidence 99999998766554321 1 12355665543335555433221110000 011111 1 26
Q ss_pred HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeecccc-CCCC--CccCCCCCCC
Q 002866 283 STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFR 354 (872)
Q Consensus 283 ~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~ 354 (872)
.++|++.+.. .++++|.+..+.|.+|.++| ++ +.+.|+++|+++++|.++. .|.. +...+.....
T Consensus 167 ~~~le~~l~~-------~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~ 239 (400)
T PTZ00125 167 VEALEKLLQD-------PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVK 239 (400)
T ss_pred HHHHHHHhCC-------CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCC
Confidence 7888887741 25889999888999999998 76 4567899999999999975 3310 1233444567
Q ss_pred CcEEEEcccccCCCCCC-ceEEEEEeCCCccccc
Q 002866 355 PDFIITSFYRVFGFDPT-GFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~Pt-GvG~LyVRk~~i~~L~ 387 (872)
+|++++| |.+++ +. .+|+++++++.++.+.
T Consensus 240 pd~~~~s--K~l~~-g~~~ig~v~~~~~~~~~~~ 270 (400)
T PTZ00125 240 PDIVLLG--KALSG-GLYPISAVLANDDVMLVIK 270 (400)
T ss_pred CCEEEEc--ccccC-CCcCcEEEEEcHHHHhhcc
Confidence 8999887 98875 32 6899999888776554
No 246
>PRK15029 arginine decarboxylase; Provisional
Probab=98.48 E-value=2.7e-06 Score=103.15 Aligned_cols=175 Identities=11% Similarity=0.057 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.+|.+..|+++|++. +-..|.|+|.++..++.+.- ++||.||+.- ..|-||..-+ .-.|++.++++-.+
T Consensus 205 G~I~eAq~~aA~~fgA~~---t~FlvNGST~gn~a~i~a~~-~~gd~Vlv~R-N~HKSv~~al---~L~ga~Pvyl~P~~ 276 (755)
T PRK15029 205 GAFGESEKYAARVFGADR---SWSVVVGTSGSNRTIMQACM-TDNDVVVVDR-NCHKSIEQGL---ILTGAKPVYMVPSR 276 (755)
T ss_pred cHHHHHHHHHHHHhCCCc---EEEEeCChhHHHHHHHHHhc-CCCCEEEeec-ccHHHHHHHH---HHcCCeEEEecccc
Confidence 578899999999999974 46678999999998887763 7899988764 4688887533 33689999886443
Q ss_pred CC----CccC-----HHHHHHHHhhhhc--cCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCC-
Q 002866 277 PT----LKLC-----STDLRKQISSKKR--RKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPK- 343 (872)
Q Consensus 277 p~----g~Id-----~edLe~~I~~~~r--r~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~- 343 (872)
+. +.++ +++++++|..... .....+.+.++++.- +--|+.++++ ++..||++|+.+|||.|+.+..
T Consensus 277 ~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~ 355 (755)
T PRK15029 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYAR 355 (755)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHhcCCeEEEECccccccc
Confidence 22 2344 8899999875421 011223446666554 4579999998 5678899999999999976521
Q ss_pred --CCcc--CCC-----CCCCCc-EEEEcccccCCCCCCceEEEEEeCC
Q 002866 344 --DMDS--LGL-----SLFRPD-FIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 344 --~mip--LDL-----s~l~~D-Flv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
...| --+ ...++| +++-|.||.+++ -+...+|.++..
T Consensus 356 F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~ 402 (755)
T PRK15029 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREG 402 (755)
T ss_pred cCccccccccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCC
Confidence 0011 011 125788 999999999988 888889998765
No 247
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=98.48 E-value=2.3e-06 Score=95.24 Aligned_cols=168 Identities=12% Similarity=0.041 Sum_probs=106.2
Q ss_pred HHHHHHHHHhcCCC-CCCCcEEEeCCHHHHHHHHHhhCCCCCC-CeEEEecccCchhHHHHHHHHHH---------cCcE
Q 002866 200 HDIKTRIMDHLNIP-ENEYGLVFTVSRGSAFKLLAESYPFHTN-KKLLTMFDYESQSVNWMAQSAKE---------KGAK 268 (872)
Q Consensus 200 eeARerIA~lLgA~-~dEY~VVFTsnATeALnLVaeslpf~~G-d~ILT~~DhEHnSVl~~~~~Akr---------kGae 268 (872)
.+.-+.++++++.. ++ .|+||+++++|+..+...... .| +++++....-|............ .+..
T Consensus 88 ~~la~~l~~~~~~~~~~--~v~~~~sgsea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 164 (398)
T PRK03244 88 IALAERLVELLGAPEGG--RVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGG 164 (398)
T ss_pred HHHHHHHHHhCCCCCCC--EEEEeCchHHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCC
Confidence 46777888988854 23 599999999999988774332 34 34554422224433332211100 0112
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeeccccC-C
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSLG-P 342 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~a-G 342 (872)
+..+|. .+.+.+++.+. .++++|.+..+.|.+|.+.| ++. .+.|+++|+++++|-++.. |
T Consensus 165 ~~~~~~------~d~~~l~~~~~--------~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g 230 (398)
T PRK03244 165 VEHVPY------GDVDALAAAVD--------DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIG 230 (398)
T ss_pred ceEeCC------CCHHHHHHhhc--------CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCc
Confidence 222221 15677777663 25788888889999999998 654 4678999999999999742 2
Q ss_pred CC--CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 343 KD--MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 343 ~~--mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.. +..+......+|.+++| |++|+ ...+|+++++++.++.+.
T Consensus 231 r~g~~~~~~~~~~~pDi~t~s--K~l~~-G~~ig~~~~~~~~~~~~~ 274 (398)
T PRK03244 231 RTGAWFAHQHDGVTPDVVTLA--KGLGG-GLPIGACLAFGPAADLLT 274 (398)
T ss_pred ccchHHhhhhhCCCCCEEEEc--hhhhC-CcccEEEEEcHHHHhhcc
Confidence 10 01223345679987664 99884 345899999888665553
No 248
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.47 E-value=1.5e-06 Score=94.96 Aligned_cols=165 Identities=12% Similarity=0.092 Sum_probs=113.2
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT 278 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~ 278 (872)
..+.|++||+++|.+++ .|++|+|+++++.+++.. +.+| .+++. + ++...+...++..|+++..+|++..
T Consensus 42 ~~~lr~~ia~~~~~~~~--~I~it~Gs~~~l~~~~~~--~~~~-~vv~~-~---P~y~~y~~~~~~~G~~v~~vp~~~~- 111 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKI--KVLIGPGLTHFIYRLLSY--INVG-NIIIV-E---PNFNEYKGYAFTHGIRISALPFNLI- 111 (332)
T ss_pred HHHHHHHHHHHhCCCcc--eEEECCCHHHHHHHHHHH--hCCC-cEEEe-C---CChHHHHHHHHHcCCeEEEEeCCcc-
Confidence 35899999999999877 499999999999999863 3555 45544 2 3344556677889999999998642
Q ss_pred CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccc--cCCCCCcc-CCC-
Q 002866 279 LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGS--LGPKDMDS-LGL- 350 (872)
Q Consensus 279 g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ--~aG~~mip-LDL- 350 (872)
..+.+ .+.. .+++++.++.-+|.||+.+|.+. ++.|+++++++++|-+= +......+ ..+
T Consensus 112 -~~~~~----~l~~-------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~ 179 (332)
T PRK06425 112 -NNNPE----ILNN-------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLN 179 (332)
T ss_pred -cCcHH----HHhh-------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHh
Confidence 23332 2321 14788888899999999999753 45678899999999882 22110001 111
Q ss_pred CCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 351 SLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
...+-=.++.||=|.||- .| +|.++..+++++.+.
T Consensus 180 ~~~~~vi~~~SfSK~~~l--~GlRiGy~v~~~~li~~l~ 216 (332)
T PRK06425 180 RSYGNVIIGRSLTKILGI--PSLRIGYIATDDYNMKISR 216 (332)
T ss_pred ccCCCEEEEeecHHhcCC--chhhheeeecCHHHHHHHH
Confidence 111223677899999994 26 698887777665554
No 249
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=98.47 E-value=2.9e-06 Score=93.25 Aligned_cols=171 Identities=12% Similarity=0.097 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC-C-C----CCCeEEEecccCchhHHHHHHHHHHcCcEEE
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP-F-H----TNKKLLTMFDYESQSVNWMAQSAKEKGAKVY 270 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp-f-~----~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~ 270 (872)
....+..+++++++|.+ .++++.|+++|+.+++.... + . ++++|++....-|......... +....
T Consensus 69 ~~~~~l~~~la~~~g~~----~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~----~~~~~ 140 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD----RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSA----TGQPK 140 (379)
T ss_pred HHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHh----cCChh
Confidence 45678899999999874 49999999999988776431 1 1 2678776543224333222111 11110
Q ss_pred ----EEeccCCCCcc----CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchh-c---HH-HHHHHHHCCcEEEeec
Q 002866 271 ----SAWFKWPTLKL----CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKY-S---YQ-WMALAQQNHWHVLLDA 337 (872)
Q Consensus 271 ----~Vpvd~p~g~I----d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~-P---Le-~I~~Are~G~~VLVDA 337 (872)
..++.. +... +.+++++.+.. ++++|.+...+|.+|... + ++ ++..|+++|+.+++|.
T Consensus 141 ~~~~~~~~~~-~~~~~~~~d~~~l~~~~~~--------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De 211 (379)
T TIGR00707 141 YQKGFEPLVP-GFSYAPYNDIESLKKAIDD--------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDE 211 (379)
T ss_pred hhccCCCCCC-CceeeCCCCHHHHHHHhhh--------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 011110 0111 57788777753 478899998888888753 4 43 3466789999999999
Q ss_pred ccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 338 GSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 338 AQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++. .+.. ..+++.....+|+++ +.|.|++ ...+|+++.++++++.+.
T Consensus 212 ~~~~~~~~g~~~~~~~~~~~~d~~t--~sK~~~~-G~riG~~~~~~~~~~~~~ 261 (379)
T TIGR00707 212 VQTGIGRTGKFFAYEHYGIEPDIIT--LAKGLGG-GVPIGATLAKEEVAEAFT 261 (379)
T ss_pred cccCCCccchhhhHHhcCCCCCEEE--EcccccC-CcccEEEEEcHHHHhhhc
Confidence 975 3321 012223344678764 5799984 456999998887766554
No 250
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=98.46 E-value=3.3e-06 Score=97.18 Aligned_cols=171 Identities=16% Similarity=0.166 Sum_probs=123.9
Q ss_pred HHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec
Q 002866 201 DIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 201 eARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv 274 (872)
..|+.|++++ | |+++ .|++|+|+++|+.++...+- ++||.|++. .++....++..+..|+++..||+
T Consensus 136 ~LR~~ia~~l~~~~g~~~~~~--~IiiT~G~q~al~l~~~~l~-~pGd~v~vE----~PtY~~~~~~~~~~g~~~~~vp~ 208 (459)
T COG1167 136 ELREAIAAYLLARRGISCEPE--QIVITSGAQQALDLLLRLLL-DPGDTVLVE----DPTYPGALQALEALGARVIPVPV 208 (459)
T ss_pred HHHHHHHHHHHHhcCCccCcC--eEEEeCCHHHHHHHHHHHhC-CCCCEEEEc----CCCcHHHHHHHHHcCCcEEecCC
Confidence 4454444443 4 4554 69999999999999999874 589998864 34555667778889999999999
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecc-ccCCCCCc-cC
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAG-SLGPKDMD-SL 348 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAA-Q~aG~~mi-pL 348 (872)
|.. -++++.|++.+... ...-++++|..+|.||+.++++ +++.|++++++++=|-. ...-.+.- +.
T Consensus 209 d~~--G~~~e~le~~~~~~------~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~ 280 (459)
T COG1167 209 DED--GIDPEALEEALAQW------KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPP 280 (459)
T ss_pred CCC--CCCHHHHHHHHhhc------CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCC
Confidence 853 47999999988753 1356899999999999999995 46788999999999887 22111000 11
Q ss_pred CCCCC---CCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 349 GLSLF---RPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 349 DLs~l---~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.+..+ +==+++.||=|.+.+ =..+|.|++.+..++.+.
T Consensus 281 ~l~~ld~~~rViy~gSFSK~l~P-glRlG~vv~p~~~~~~~~ 321 (459)
T COG1167 281 PLKALDAPGRVIYLGSFSKTLAP-GLRLGYVVAPPELIEKLL 321 (459)
T ss_pred ChHhhCCCCCEEEEeeehhhccc-ccceeeeeCCHHHHHHHH
Confidence 22222 334899999999875 456888887777665543
No 251
>PLN02368 alanine transaminase
Probab=98.46 E-value=2.2e-06 Score=97.23 Aligned_cols=180 Identities=9% Similarity=0.046 Sum_probs=118.4
Q ss_pred HHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.||+++ | ++++ +|++|+|+++|+.+++..+-..+||.|++.. ++.......++..|++++.++
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~----P~Y~~y~~~~~~~g~~~v~v~ 183 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPE--LIFLTDGASKGVMQILNAVIRGEKDGVLVPV----PQYPLYSATISLLGGTLVPYY 183 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChh--hEEEcccHHHHHHHHHHHHcCCCCCEEEEeC----CCCccHHHHHHHcCCEEEEEe
Confidence 46888888877 6 4555 5999999999999999887446899987652 222233444566899999998
Q ss_pred ccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccc--cC--CC-
Q 002866 274 FKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGS--LG--PK- 343 (872)
Q Consensus 274 vd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ--~a--G~- 343 (872)
++.. +..++.++|++.+...+ ....+++++.++.-+|.||.+++.+. +..|++++++|+.|-+- +. +.
T Consensus 184 ~~~~~~~~~d~~~le~~i~~~~--~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~ 261 (407)
T PLN02368 184 LEESENWGLDVNNLRQSVAQAR--SKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDER 261 (407)
T ss_pred cccccCCCCCHHHHHHHHHHHh--hcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 8642 24588999999886421 11235888888888999999999863 35678999999999872 22 21
Q ss_pred CCccC-----CCC----CCCCcEEEEcccccC-CCCCCceEEEEE---eCCCccccc
Q 002866 344 DMDSL-----GLS----LFRPDFIITSFYRVF-GFDPTGFGCLLI---KKSVMGSLQ 387 (872)
Q Consensus 344 ~mipL-----DLs----~l~~DFlv~S~HK~f-G~~PtGvG~LyV---Rk~~i~~L~ 387 (872)
...++ ++. ...-=+++.|+-|.| |-+=--+|.+++ .++.++.+.
T Consensus 262 ~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~ 318 (407)
T PLN02368 262 PFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIY 318 (407)
T ss_pred CcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHH
Confidence 00110 110 011226678999987 531123787774 444544443
No 252
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=98.45 E-value=2.2e-06 Score=95.95 Aligned_cols=203 Identities=12% Similarity=0.085 Sum_probs=123.9
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhc---cCcCcCCCchHHHHHHHHHHHHHhc---CCCCCCCcEEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLS---NHALYGGAEKGTVEHDIKTRIMDHL---NIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~---~~~~ygNpsS~~~ieeARerIA~lL---gA~~dEY~VVF 221 (872)
+.+.|+.+-... +++.+.+++.+ ....+. ....|+ |. .-....|+.||+++ +++++ +|++
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~~~~~--------~~~~~~~~~~~~~Y~-p~--~g~~~lr~aia~~~~~~~~~~d--~I~i 100 (402)
T TIGR03542 34 DIIRLGIGDTTQPLPASVIEAFHN--------AVDELASEETFRGYG-PE--QGYPFLREAIAENDYRGRIDPE--EIFI 100 (402)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHH--------HHhcccccccccCCC-CC--CCCHHHHHHHHHHHHhcCCCHH--HEEE
Confidence 478888776553 45556665322 111110 001232 21 12347899999876 67776 5999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCc-----------EEEEEeccCCCCccCHHHHHHHH
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGA-----------KVYSAWFKWPTLKLCSTDLRKQI 290 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGa-----------eV~~Vpvd~p~g~Id~edLe~~I 290 (872)
|+|+++|+.++... +.+|+.|++.. ++...+...++..|+ ++..+|.+..+ .+..+ +.
T Consensus 101 t~Ga~~al~~l~~l--~~~gd~Vlv~~----P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~-~~~~~-~~--- 169 (402)
T TIGR03542 101 SDGAKCDVFRLQSL--FGSDNTVAVQD----PVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKEN-NFIPD-LP--- 169 (402)
T ss_pred CCCcHHHHHHHHHh--cCCCCEEEEeC----CCCcchHHHHHHcCCccccccccccceEEEeecchhh-CCCCC-cc---
Confidence 99999999987543 36889887652 122234455666788 88888875321 12111 11
Q ss_pred hhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecccc--CCCCCccCCCCCC----CCcEEEE
Q 002866 291 SSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL--GPKDMDSLGLSLF----RPDFIIT 360 (872)
Q Consensus 291 ~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~--aG~~mipLDLs~l----~~DFlv~ 360 (872)
. ..++++|.++.-+|.||+.++.+ ++..|+++++++++|-+.. ......+..+..+ ..-+++.
T Consensus 170 ~-------~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~ 242 (402)
T TIGR03542 170 E-------EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFR 242 (402)
T ss_pred c-------cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEe
Confidence 0 12578999889999999999964 3466789999999999843 2111012222222 1236688
Q ss_pred cccccCCCCCCceEEEEEeCCC
Q 002866 361 SFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 361 S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
|+=|.||.+=..+|++++.+..
T Consensus 243 SfSK~~g~pGlRiG~~i~~~~l 264 (402)
T TIGR03542 243 SFSKTAGFTGVRLGWTVVPKEL 264 (402)
T ss_pred cCccccCCCCcceEEEEecHHH
Confidence 9999998422337888876554
No 253
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=98.45 E-value=1.8e-06 Score=94.67 Aligned_cols=197 Identities=12% Similarity=0.211 Sum_probs=130.1
Q ss_pred ceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC---CCCCCCcEEEeCCH
Q 002866 150 KVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN---IPENEYGLVFTVSR 225 (872)
Q Consensus 150 ~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg---A~~dEY~VVFTsnA 225 (872)
.+.|+.+-... .|+.+++++.+ .+... ....|..+. ..+.|+.||++++ ++++ .|++|+|+
T Consensus 21 ~i~l~~~~~~~~~p~~~~~~~~~-------~~~~~--~~~~Y~~~~----~~~Lr~aia~~~~~~~~~~~--~i~it~Ga 85 (335)
T PRK14808 21 RTYLALNENPFPFPEDLVDEVFR-------RLNSD--TLRIYYDSP----DEELIEKILSYLDTDFLSKN--NVSVGNGA 85 (335)
T ss_pred eeEecCCCCCCCCCHHHHHHHHH-------Hhhhh--hhhcCCCCC----hHHHHHHHHHHhCCCCCCcc--eEEEcCCH
Confidence 67777655443 45666776432 11111 011233332 4579999999999 7776 49999999
Q ss_pred HHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEE
Q 002866 226 GSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLF 305 (872)
Q Consensus 226 TeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LV 305 (872)
++++.++...+ +.|++. + ++.......++..|+++..+|.+. ++.++... +. +++++
T Consensus 86 ~~~i~~~~~~~-----d~v~v~-~---P~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~----~~---------~~~~i 142 (335)
T PRK14808 86 DEIIYVMMLMF-----DRSVFF-P---PTYSCYRIFAKAVGAKFLEVPLTK-DLRIPEVN----VG---------EGDVV 142 (335)
T ss_pred HHHHHHHHHHh-----CcEEEC-C---CCHHHHHHHHHHcCCeEEEecCCC-cCCCChhH----cc---------CCCEE
Confidence 99999999887 456554 2 344456667788899999999864 34333221 11 36899
Q ss_pred EEeCccCcccchhcHHHHHHHHHCCcEEEeeccc--cCCCCCccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCC
Q 002866 306 VFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGS--LGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKS 381 (872)
Q Consensus 306 a~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ--~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~ 381 (872)
.++.-+|.||..++.+.+...-++++++++|-+- +.+..+.++ +....-=+++.|+=|.||. .| +|+++..++
T Consensus 143 ~i~nP~NPTG~~~s~~~l~~l~~~~~~ii~DE~Y~~f~~~~~~~~-~~~~~~vi~~~S~SK~~~l--~GlRvG~~v~~~~ 219 (335)
T PRK14808 143 FIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDL-LKKYENLAVIRTFSKAFSL--AAQRIGYVVSSEK 219 (335)
T ss_pred EEeCCCCCCCCCcCHHHHHHHHhcCCEEEEECchhhhcCCchHHH-HHhCCCEEEEEechhhccC--cccceEEEEeCHH
Confidence 9999999999999998665444689999999982 222211111 1222234788999999993 35 799998877
Q ss_pred Cccccc
Q 002866 382 VMGSLQ 387 (872)
Q Consensus 382 ~i~~L~ 387 (872)
+++.+.
T Consensus 220 ~~~~l~ 225 (335)
T PRK14808 220 FIDAYN 225 (335)
T ss_pred HHHHHH
Confidence 666553
No 254
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=98.41 E-value=1.9e-06 Score=99.21 Aligned_cols=130 Identities=14% Similarity=0.162 Sum_probs=95.6
Q ss_pred HHHHHHHHHhcC--------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHH-HcCcEEE
Q 002866 200 HDIKTRIMDHLN--------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAK-EKGAKVY 270 (872)
Q Consensus 200 eeARerIA~lLg--------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~Ak-rkGaeV~ 270 (872)
...|+.||++++ ++++ .|++|+|+++|+.+++..+. .+||.|++..-+ +.... ..+. ..|+++.
T Consensus 89 ~~LR~aiA~~l~~~~~~~~~v~~~--~Iiit~Ga~~al~~l~~~l~-~pGd~Vlv~~P~-Y~~~~---~~~~~~~g~~~v 161 (468)
T PLN02450 89 PAFKNALAEFMSEIRGNKVTFDPN--KLVLTAGATSANETLMFCLA-EPGDAFLLPTPY-YPGFD---RDLKWRTGVEIV 161 (468)
T ss_pred HHHHHHHHHHHHHhhCCCCCcChH--HeEEccChHHHHHHHHHHhC-CCCCEEEECCCC-CCchH---HHHhhcCCcEEE
Confidence 468888998885 4665 59999999999999999884 789998875321 12221 2233 4799999
Q ss_pred EEeccC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecc
Q 002866 271 SAWFKW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAG 338 (872)
Q Consensus 271 ~Vpvd~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAA 338 (872)
.+|.+. .+..++.+++++.+.... +...+++++.++.-+|.||..+|.+. +..|+++++++++|-+
T Consensus 162 ~v~~~~~~~~~~~~~~le~~~~~~~--~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~ 232 (468)
T PLN02450 162 PIHCSSSNGFQITESALEEAYQQAQ--KLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEI 232 (468)
T ss_pred EEecCCccCCcCCHHHHHHHHHHHH--hcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcc
Confidence 998753 344567788888775421 12346788888888999999999863 4567899999999988
No 255
>PRK08354 putative aminotransferase; Provisional
Probab=98.40 E-value=1.6e-05 Score=86.17 Aligned_cols=147 Identities=13% Similarity=0.139 Sum_probs=102.3
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCC
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTL 279 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g 279 (872)
...|+.+|++.|. .|++|+|+++|+.+++..+ .+|+.|++.. ++...+...++..|+++..++
T Consensus 43 ~~l~~~ia~~~~~-----~I~vt~G~~~al~~~~~~~--~~gd~vlv~~----P~y~~~~~~~~~~g~~~~~~~------ 105 (311)
T PRK08354 43 EWLEEEFSKLFGE-----PIVITAGITEALYLIGILA--LRDRKVIIPR----HTYGEYERVARFFAARIIKGP------ 105 (311)
T ss_pred HHHHHHHHHHHCC-----CEEECCCHHHHHHHHHHhh--CCCCeEEEeC----CCcHHHHHHHHHcCCEEeecC------
Confidence 4689999999983 3999999999999888544 3789887652 233345566777899886543
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecccc-CCCCCccCCCCCCC
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSL-GPKDMDSLGLSLFR 354 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~-aG~~mipLDLs~l~ 354 (872)
++.+.|++.+. +++++.++.-+|.||..+|.+. ++.|+++|+++++|-+-. ...+...+ + ..
T Consensus 106 -~d~~~l~~~~~---------~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~--~-~~ 172 (311)
T PRK08354 106 -NDPEKLEELVE---------RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESP--E-GE 172 (311)
T ss_pred -CCHHHHHHhhc---------CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccccc--C-CC
Confidence 45677776653 2456777777899999999863 355688999999999831 11100111 1 23
Q ss_pred CcEEEEcccccCCCCCCc--eEEEEE
Q 002866 355 PDFIITSFYRVFGFDPTG--FGCLLI 378 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtG--vG~LyV 378 (872)
--+++.|+=|.||- .| +|.++.
T Consensus 173 ~vi~~~S~SK~~~l--~GlRiG~~v~ 196 (311)
T PRK08354 173 NIIKLRTFTKSYGL--PGIRVGYVKG 196 (311)
T ss_pred cEEEEeccHhhcCC--ccceeeeeee
Confidence 34788999999984 25 687765
No 256
>PLN02231 alanine transaminase
Probab=98.38 E-value=5.1e-06 Score=97.52 Aligned_cols=132 Identities=14% Similarity=0.163 Sum_probs=97.8
Q ss_pred HHHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
+...|+.||+++ | ++++ +|++|+|+++|+.++...+--.+||.|++.. +........++..|++++.+
T Consensus 170 ~~~lReaIA~~~~~r~g~~~~pe--~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~----P~Y~~y~~~~~~~g~~~v~~ 243 (534)
T PLN02231 170 IKGLRDAIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQLLIRSEKDGILCPI----PQYPLYSASIALHGGTLVPY 243 (534)
T ss_pred cHHHHHHHHHHHHhccCCCCCcc--cEEEeCCHHHHHHHHHHHhccCCCCEEEEeC----CCChhHHHHHHHcCCEEEEE
Confidence 457888888887 4 4454 6999999999999999987434689887653 12222234456679999999
Q ss_pred eccCCC-CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecc
Q 002866 273 WFKWPT-LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAG 338 (872)
Q Consensus 273 pvd~p~-g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAA 338 (872)
+++..+ ..++.++|++.+...+ ....+++++.+..-+|.||.+++.+. +..|++++++++.|-+
T Consensus 244 ~l~~~~~~~~d~~~Le~~l~~~~--~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEv 312 (534)
T PLN02231 244 YLDEATGWGLEISELKKQLEDAR--SKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEV 312 (534)
T ss_pred ecCcccCCCCCHHHHHHHHHHHh--hcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 987432 3689999999886432 12225788888888999999999863 4667899999999987
No 257
>PRK05839 hypothetical protein; Provisional
Probab=98.36 E-value=1.6e-05 Score=88.38 Aligned_cols=169 Identities=14% Similarity=0.098 Sum_probs=108.6
Q ss_pred HHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCC-CCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 201 DIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPF-HTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 201 eARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf-~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
+.|+.||+++ | ++++ .|++|+|+++|+.+++..+-+ .+|+.|++.. ++.......++..|+++..++
T Consensus 64 ~lr~aia~~l~~~~g~~~~~~--~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~----P~y~~~~~~~~~~g~~v~~v~ 137 (374)
T PRK05839 64 SLREAQRGFFKRRFKIELKEN--ELIPTFGTREVLFNFPQFVLFDKQNPTIAYPN----PFYQIYEGAAIASRAKVLLMP 137 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHHHHHHHHHHhcCCCCCEEEECC----CCchhhHHHHHhcCCEEEEee
Confidence 4666665554 6 5555 599999999999998887644 4678877642 233334455677899999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecccc-CCCC-Cc
Q 002866 274 FKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSL-GPKD-MD 346 (872)
Q Consensus 274 vd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~-aG~~-mi 346 (872)
.+.. +..++..+. .+ .+++++.++.-+|.||+.+|.+. +..|+++|+++++|-+-. .-.+ ..
T Consensus 138 ~~~~~~~~~d~~~~--~~---------~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~ 206 (374)
T PRK05839 138 LTKENDFTPSLNEK--EL---------QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPP 206 (374)
T ss_pred cccccCCcCCcchh--hh---------ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCC
Confidence 8632 223332221 12 14789999999999999999863 456789999999998821 1100 00
Q ss_pred c--CCC------CCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 347 S--LGL------SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 347 p--LDL------s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
+ +++ ...+-=+++.|+-|.||.+=.-+|+++..++.++.+
T Consensus 207 ~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~ 254 (374)
T PRK05839 207 PSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKY 254 (374)
T ss_pred CCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHHHH
Confidence 1 111 111222788999998875223488888766555443
No 258
>PRK06855 aminotransferase; Validated
Probab=98.36 E-value=1.1e-05 Score=91.69 Aligned_cols=163 Identities=13% Similarity=0.170 Sum_probs=108.2
Q ss_pred HHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-ccCchhHHHHHHHHHHcCcEEEEE
Q 002866 200 HDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMF-DYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 200 eeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~-DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
.+.|+.||+++ | ++++ +|++|+|+++|+.+++. + ..+||.|++.. .|. .... . .....|+++..+
T Consensus 76 ~~LReaia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~-l-~~~Gd~Vlv~~P~Y~--~~~~-~-~~~~~g~~~v~v 147 (433)
T PRK06855 76 LETREFLAELNNKRGGAQITPD--DIIFFNGLGDAIAKIYG-L-LRREARVIGPSPAYS--THSS-A-EAAHAGYPPVTY 147 (433)
T ss_pred HHHHHHHHHHHHhccCCCCCHh--HEEEcCcHHHHHHHHHH-h-cCCCCeEEEeCCCCc--hHHH-H-HHHhcCCeEEEE
Confidence 46888888886 3 5555 59999999999999874 4 57899987652 222 1111 1 122358888888
Q ss_pred eccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccc--cC--CC
Q 002866 273 WFKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGS--LG--PK 343 (872)
Q Consensus 273 pvd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ--~a--G~ 343 (872)
|++.. +..++.++|++.+.. .++++++.++.-+|.||..+|.+. +..|++++++++.|-+- +. +.
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~------~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~ 221 (433)
T PRK06855 148 RLDPENNWYPDLDDLENKVKY------NPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK 221 (433)
T ss_pred ecccccCCCCCHHHHHHHHhc------CCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Confidence 87632 235789999988853 124677887888999999999863 35678999999999983 21 21
Q ss_pred CCccCCCCCC---CCcEEEEcccccCCCCCCceEEEEE
Q 002866 344 DMDSLGLSLF---RPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 344 ~mipLDLs~l---~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
. ...+..+ ..-+++.|+=|.|+.+=--+|.+++
T Consensus 222 ~--~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~ 257 (433)
T PRK06855 222 K--TVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEV 257 (433)
T ss_pred C--CCCHHHHcCcCCeEEEecCccccCCCcceEEEEEE
Confidence 1 1122111 1237889999988741123666654
No 259
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.31 E-value=1.3e-05 Score=87.55 Aligned_cols=159 Identities=11% Similarity=0.133 Sum_probs=107.9
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCC
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTL 279 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g 279 (872)
...|+.||++++. + .|++|+|+++||.++.. ..+|++|++.. ++.......++..|+++..+|++
T Consensus 52 ~~Lr~~ia~~~~~--~--~I~it~Gs~~al~~~~~---~~~gd~v~v~~----P~y~~~~~~~~~~g~~~~~v~~~---- 116 (330)
T PRK05664 52 DGLEAAARAYYGA--P--QLLPVAGSQAAIQALPR---LRAPGRVGVLS----PCYAEHAHAWRRAGHQVRELDEA---- 116 (330)
T ss_pred HHHHHHHHHHhCC--C--CEEECcCHHHHHHHHHH---ccCCCEEEEcC----CChHHHHHHHHHcCCeEEEechh----
Confidence 4789999999986 3 49999999999999864 35789987652 34445566677889999887642
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccccCCCC-CccCCCCCCC
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSLGPKD-MDSLGLSLFR 354 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~aG~~-mipLDLs~l~ 354 (872)
++++.+. +++++.+..-+|.||+.+|.+. +..++++++++++|-+-.-... .....+...+
T Consensus 117 -----~~~~~~~---------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~ 182 (330)
T PRK05664 117 -----EVEAALD---------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRP 182 (330)
T ss_pred -----hHhhhhc---------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCC
Confidence 3444442 3566666666899999999863 3456789999999987421110 0012222111
Q ss_pred CcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 355 PDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
-=+++.|+-|.||.+=--+|.++..++.++.+.
T Consensus 183 ~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~ 215 (330)
T PRK05664 183 GLIVLRSFGKFFGLAGARLGFVLAEPALLRALA 215 (330)
T ss_pred CEEEEeeccccccCCCcceEEEEeCHHHHHHHH
Confidence 127899999999841123898887766655543
No 260
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=98.29 E-value=2.5e-05 Score=91.56 Aligned_cols=150 Identities=15% Similarity=0.107 Sum_probs=97.2
Q ss_pred CcEEEeCCHHHHHHHHHhhC----CCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC------CccCHHHH
Q 002866 217 YGLVFTVSRGSAFKLLAESY----PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT------LKLCSTDL 286 (872)
Q Consensus 217 Y~VVFTsnATeALnLVaesl----pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~------g~Id~edL 286 (872)
.+|+.|.|+|+|+.+++.++ -..+||+|++..-. ........+ ....|++++.++.+..+ ..++.++|
T Consensus 156 ~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~-y~~y~~~~~-l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l 233 (521)
T TIGR03801 156 FDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPI-FTPYLEIPE-LPRYDFEVVRIKADEMTEDGTHTWQYPDKEL 233 (521)
T ss_pred CeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCC-cHHHHHHHH-HhcCCcEEEEeecccccccccccCCCCHHHH
Confidence 36999999999999988763 25789998765321 122222211 22347888877765321 45788888
Q ss_pred HHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHC--CcEEEeeccc--cCCCCCccCCCCCCCC--c
Q 002866 287 RKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQN--HWHVLLDAGS--LGPKDMDSLGLSLFRP--D 356 (872)
Q Consensus 287 e~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~--G~~VLVDAAQ--~aG~~mipLDLs~l~~--D 356 (872)
++++. ++++++.+..-+|.||++++.+. +..|+++ +++|+.|=+= +... ...+-..-+ -
T Consensus 234 ~~~~~--------~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~sl~~~~~~~v 302 (521)
T TIGR03801 234 EKLRD--------PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FRSLFAELPYNT 302 (521)
T ss_pred HHhcC--------CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---ccchhhhCCCCE
Confidence 76553 35888888788999999999753 3556765 8999999872 2321 111211122 3
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeCC
Q 002866 357 FIITSFYRVFGFDPTG--FGCLLIKKS 381 (872)
Q Consensus 357 Flv~S~HK~fG~~PtG--vG~LyVRk~ 381 (872)
+++.|+-|.||. +| +|.++..+.
T Consensus 303 I~v~SfSK~fg~--~G~RlG~i~~~~~ 327 (521)
T TIGR03801 303 IGVYSFSKYFGA--TGWRLGTIALHKD 327 (521)
T ss_pred EEEEcchhhccC--chhhhhhhhcCch
Confidence 778899999984 35 777776543
No 261
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=98.28 E-value=1.7e-05 Score=88.99 Aligned_cols=205 Identities=13% Similarity=0.155 Sum_probs=142.4
Q ss_pred CceecccCCCCCC-cHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC-CCCCCCcEEEeCCHH
Q 002866 149 PKVCLDYCGFGLF-SYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN-IPENEYGLVFTVSRG 226 (872)
Q Consensus 149 ~~IYLDyAAtgp~-p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg-A~~dEY~VVFTsnAT 226 (872)
..+.|+.+=...- |+.+++++.+ .... ...|-.+ ...+.|+++|++.| .+++ .|+.+.|++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~--------~~~~---~~rYPd~----~~~~l~~a~a~~~~~~~~~--~V~~gnGsd 85 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRA--------ALDK---LNRYPDP----DYRELRAALAEYYGVVDPE--NVLVGNGSD 85 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHH--------HHHh---hccCCCC----cHHHHHHHHHHHhCCCCcc--eEEEcCChH
Confidence 5677776555432 3555554321 1111 1245444 34689999999999 6665 488899999
Q ss_pred HHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEE
Q 002866 227 SAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFV 306 (872)
Q Consensus 227 eALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa 306 (872)
+.|.++.+.+. .+||.+++.. ++.......|+..|+++..+|.+. ..++.+.+...+.. +++||.
T Consensus 86 e~i~~l~~~~~-~~gd~vl~~~----Ptf~~Y~~~a~~~g~~~~~v~~~~--~~~d~~~~~~~~~~--------~~~lv~ 150 (356)
T COG0079 86 ELIELLVRAFV-EPGDTVLIPE----PTFSMYEIAAQLAGAEVVKVPLKE--FRLDLDAILAAIRD--------KTKLVF 150 (356)
T ss_pred HHHHHHHHHhh-cCCCEEEEcC----CChHHHHHHHHhcCCeEEEecccc--cccCHHHHHHhhhc--------CCCEEE
Confidence 99999999985 6788888762 122222345677899999999864 56788888777753 488999
Q ss_pred EeCccCcccchhcHHHHHHHHH---CCcEEEeecc--ccCCCCCccCCCCCCCCc--EEEEcccccCCCCCCceEEEEEe
Q 002866 307 FPVQSRVTGAKYSYQWMALAQQ---NHWHVLLDAG--SLGPKDMDSLGLSLFRPD--FIITSFYRVFGFDPTGFGCLLIK 379 (872)
Q Consensus 307 ~p~vSNvTG~i~PLe~I~~Are---~G~~VLVDAA--Q~aG~~mipLDLs~l~~D--Flv~S~HK~fG~~PtGvG~LyVR 379 (872)
++.=+|.||..++.+.+....+ .++.|+||-| .+++. ..+.+-. ..+ ++.=||=|.||-+=--+|..+..
T Consensus 151 i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~--~~~~l~~-~~~nlivlRTfSKa~gLAGlRlGy~ia~ 227 (356)
T COG0079 151 LCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPE--SSLELLK-YPPNLIVLRTFSKAFGLAGLRVGYAIAN 227 (356)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCc--hhhhhcc-CCCCEEEEEecHHhhhcchhceeeccCC
Confidence 9999999999999986654432 2889999998 56663 2333333 344 67779999988421238888888
Q ss_pred CCCcccccC
Q 002866 380 KSVMGSLQN 388 (872)
Q Consensus 380 k~~i~~L~P 388 (872)
+++++.|+.
T Consensus 228 ~~~i~~l~~ 236 (356)
T COG0079 228 PELIAALNK 236 (356)
T ss_pred HHHHHHHHH
Confidence 888777754
No 262
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.27 E-value=1.7e-05 Score=88.74 Aligned_cols=168 Identities=10% Similarity=0.099 Sum_probs=103.8
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC-CC-------CCC-CeEEEecccCchhHHHHHHHHHH----c
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY-PF-------HTN-KKLLTMFDYESQSVNWMAQSAKE----K 265 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl-pf-------~~G-d~ILT~~DhEHnSVl~~~~~Akr----k 265 (872)
..+.-++++++++. + .++|+.++|+|+..++... .+ .+| ++|++....-|............ .
T Consensus 84 ~~~l~~~l~~~~~~--~--~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~ 159 (396)
T PRK04073 84 LGPWYEKVAKLTGK--D--MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKR 159 (396)
T ss_pred HHHHHHHHHhcCCC--C--eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccccc
Confidence 34556777887764 2 5999999999877654421 11 134 45665533235544332221110 1
Q ss_pred Cc-----EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEe
Q 002866 266 GA-----KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLL 335 (872)
Q Consensus 266 Ga-----eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLV 335 (872)
+. .+..++. + +.+++++++. +++++|.+..++|.+|.++| ++ +.+.|+++|+++++
T Consensus 160 ~~~~~~~~~~~~~~--~----d~~~l~~~i~--------~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~ 225 (396)
T PRK04073 160 GFGPMLPGIKKIPY--G----DLEALKAAIT--------PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIA 225 (396)
T ss_pred CCCCCCCCceEeCC--C----CHHHHHHhcc--------cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 10 1222222 1 4677777664 25899999999999999998 55 34568999999999
Q ss_pred ecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCC-CceEEEEEeCCCccccc
Q 002866 336 DAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 336 DAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~ 387 (872)
|-+|. .|.. +..++.....||++++| |.+|. + --+|++..++++++.+.
T Consensus 226 DEv~~g~g~~g~~~~~~~~~~~pdi~~~s--K~lg~-gg~~ig~~~~~~~i~~~~~ 278 (396)
T PRK04073 226 DEIQTGLGRTGKLFACDWDNVTPDMYILG--KALGG-GVFPISCVAANRDILGVFT 278 (396)
T ss_pred ecchhCCCcCcHHHHhhhcCCCCCEEEec--ccccC-CCCcceEEEEcHHHHhhhc
Confidence 99976 3321 11234455678988875 98875 2 22789988887765543
No 263
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=98.26 E-value=1.1e-05 Score=90.65 Aligned_cols=164 Identities=11% Similarity=0.108 Sum_probs=105.5
Q ss_pred HHHHHHHHHhc------CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE-----
Q 002866 200 HDIKTRIMDHL------NIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK----- 268 (872)
Q Consensus 200 eeARerIA~lL------gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae----- 268 (872)
.+.|+.||+++ +++++ .|++|+|+++|+.++... +.+||+|++.. ++.......++..|++
T Consensus 79 ~~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~l~~~--~~~gd~V~v~~----P~Y~~~~~~~~~~g~~~~~~~ 150 (409)
T PRK07590 79 DFLREKIAENDYQARGCDISAD--EIFISDGAKCDTGNILDI--FGPDNTIAVTD----PVYPVYVDTNVMAGRTGEANE 150 (409)
T ss_pred HHHHHHHHHHHHHhcCCcCChh--hEEECCCHHHHHHHHHHh--cCCCCEEEEeC----CCCcchHHHHHHcCCcccccc
Confidence 46888888875 67776 599999999999987643 46899987652 2222333455667776
Q ss_pred ------EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecc
Q 002866 269 ------VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAG 338 (872)
Q Consensus 269 ------V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAA 338 (872)
+..+|++..++ +..+ +. ..+++++.++.-+|.||+.++.+. ++.|++++++++.|-+
T Consensus 151 ~~~~~~~~~v~~~~~~~-~~~d-----~~-------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~ 217 (409)
T PRK07590 151 DGRYSGIVYLPCTAENN-FVPE-----LP-------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAA 217 (409)
T ss_pred cccccceeEeecccccC-Cccc-----Cc-------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEcc
Confidence 78888753211 2111 11 125788888888899999999863 4557899999999987
Q ss_pred cc--CCCCCccCCCCCCC----CcEEEEcccccCCCCCCceEEEEEeCCCcc
Q 002866 339 SL--GPKDMDSLGLSLFR----PDFIITSFYRVFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 339 Q~--aG~~mipLDLs~l~----~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~ 384 (872)
-. ......+..+..+. .-+++.|+=|.||.+=.-+|.++..++.+.
T Consensus 218 Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~ 269 (409)
T PRK07590 218 YEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKG 269 (409)
T ss_pred chhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHHHhh
Confidence 32 21100111222221 126678999999841123788887665543
No 264
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=98.21 E-value=2.2e-05 Score=88.62 Aligned_cols=176 Identities=13% Similarity=0.163 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHhcCC--CCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec
Q 002866 197 TVEHDIKTRIMDHLNI--PENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 197 ~~ieeARerIA~lLgA--~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv 274 (872)
++....+++++.|.|. .+++ +|.-|.||.+||-....++ ..+||+|++.--+ ..+..+.. +-.|.+.+.++.
T Consensus 73 ~L~~aL~k~~se~~~~~~~~~~-eVlVT~GA~~ai~~~~~~l-~~~GDeVii~eP~-fd~Y~~~~---~maG~tpv~v~~ 146 (420)
T KOG0257|consen 73 QLRKALAKAYSEFYGGLLDPDD-EVLVTAGANEAISSALLGL-LNPGDEVIVFEPF-FDCYIPQV---VMAGGTPVFVPL 146 (420)
T ss_pred HHHHHHHHHHHHHhccccCCcc-cEEEecCchHHHHHHHHHH-cCCCCEEEEecCc-chhhhhHH---hhcCCcceeecc
Confidence 5677788888887774 3332 5999999999998666665 4789998764211 12222322 225788888887
Q ss_pred c-------CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecc-cc--
Q 002866 275 K-------WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAG-SL-- 340 (872)
Q Consensus 275 d-------~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAA-Q~-- 340 (872)
. .++..+|.++|+.++.. +|+++.+..-+|.||.+++=+ ++..|++||.+|+.|-+ +.
T Consensus 147 ~~~~g~~~s~~~~~D~~~le~~~t~--------kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v 218 (420)
T KOG0257|consen 147 KPKEGNVSSSDWTLDPEELESKITE--------KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLV 218 (420)
T ss_pred ccccccccCccccCChHHHHhhccC--------CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHh
Confidence 6 44567899999988864 699999999999999999964 34578999999999987 32
Q ss_pred -CCCCCccCC--CCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccccC
Q 002866 341 -GPKDMDSLG--LSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQN 388 (872)
Q Consensus 341 -aG~~mipLD--Ls~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~P 388 (872)
-|..|+.+- -..+..-.-+.|+-|.|| -+| +|-++..+.++..+.+
T Consensus 219 ~d~~~h~r~aslPgm~ertitvgS~gKtf~--~TGWrlGW~igp~~L~~~~~~ 269 (420)
T KOG0257|consen 219 YDGNKHIRIASLPGMYERTITVGSFGKTFG--VTGWRLGWAIGPKHLYSALFP 269 (420)
T ss_pred hCCCcceeeecCCchhheEEEeccccceee--eeeeeeeeeechHHhhhhHHH
Confidence 222111110 011234456899999999 477 7888886655555543
No 265
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.21 E-value=6.4e-07 Score=100.01 Aligned_cols=171 Identities=17% Similarity=0.181 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEeccc--Cc-hhHHHHHHHHHHcCcEEEEEec
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDY--ES-QSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~Dh--EH-nSVl~~~~~AkrkGaeV~~Vpv 274 (872)
....+.+.++.+.||.. .+.+.|...|+-++...+. +|.+++++.-+ |- .+. .+-+..+..|++++.|-.
T Consensus 48 R~~~v~~ll~~ltgAea----A~VvNnnaAAv~L~l~~la--~~~EvIvsRGelVeiGgsF-Rip~vm~~sGa~lvEVGt 120 (367)
T PF03841_consen 48 RYAHVEELLCELTGAEA----ALVVNNNAAAVLLALNTLA--KGKEVIVSRGELVEIGGSF-RIPDVMRQSGARLVEVGT 120 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccc----ccccccccccccccccccc--ccccccccccccccccccc-cccccccccccccccccc
Confidence 34567778899999853 4556777788888887764 56676544321 10 111 122444557888775532
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCc--ccch--hcHH-HHHHHHHCCcEEEeeccc---------c
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRV--TGAK--YSYQ-WMALAQQNHWHVLLDAGS---------L 340 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNv--TG~i--~PLe-~I~~Are~G~~VLVDAAQ---------~ 340 (872)
+.+.+..+++++|.. +|.++-.-|-||. .|.. .|++ ++..||++++.+++|+++ .
T Consensus 121 ---tN~t~~~Dye~AI~e--------~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~g 189 (367)
T PF03841_consen 121 ---TNRTHLSDYEKAITE--------NTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYG 189 (367)
T ss_dssp ---------------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-
T ss_pred ---ccccccccccccccc--------cccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCccccc
Confidence 235667888888864 5888888888886 3433 3454 678899999999999998 1
Q ss_pred CCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 341 GPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 341 aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
.+....--+.-+.++|.++||+-|.+|+ |. .|+++-|+++++.++.
T Consensus 190 l~~Ep~v~~~~~~GaDlV~fSGdKlLGG-PQ-aGiI~Gkk~lI~~lk~ 235 (367)
T PF03841_consen 190 LPDEPTVQEYLAAGADLVTFSGDKLLGG-PQ-AGIIVGKKELIEKLKK 235 (367)
T ss_dssp ---------CCCCT-SEEEEETTSSSSS--S--EEEEEEHHHHHHHHH
T ss_pred CccccHHHHHhhcCCCEEEEECCCcCCC-CC-eEEEEeCHHHHHHHhh
Confidence 2221001122346899999999999999 88 6999999999988753
No 266
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=98.19 E-value=3.9e-05 Score=85.42 Aligned_cols=208 Identities=13% Similarity=0.125 Sum_probs=117.6
Q ss_pred CCceecccCC------CCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCG------FGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAA------tgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++..|+|..+ .+.-.+.+++++.+. +. .+. ..++........+.-++++++.+. + .|+|
T Consensus 29 dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~-------~~-~~~---~~~~~~~~~~~~~la~~l~~~~~~--~--~v~~ 93 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGHAHPHLVEALKEQ-------AE-KLW---HVSNLYRIPEQERLAERLVENSFA--D--KVFF 93 (389)
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHH-------HH-hcC---ccccccCChHHHHHHHHHHhhCCC--C--EEEE
Confidence 3467899765 244556777765431 11 110 111111112334555677777643 3 5999
Q ss_pred eCCHHHHHHHHHhh---CCCCCCC----eEEEecccCchhHHHHHHHHHHcCcEEEE---EeccCCCC----ccCHHHHH
Q 002866 222 TVSRGSAFKLLAES---YPFHTNK----KLLTMFDYESQSVNWMAQSAKEKGAKVYS---AWFKWPTL----KLCSTDLR 287 (872)
Q Consensus 222 TsnATeALnLVaes---lpf~~Gd----~ILT~~DhEHnSVl~~~~~AkrkGaeV~~---Vpvd~p~g----~Id~edLe 287 (872)
|+|+|+|+..+... +.+.+|+ +|++....-|......... .|..... .|.. ++. ..+.++++
T Consensus 94 ~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~ 169 (389)
T PRK01278 94 TNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAA---GGQEKYLEGFGPLV-PGFDQVPFGDIEALK 169 (389)
T ss_pred cCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhc---cCChhhcccCCCCC-CCceEeCCCCHHHHH
Confidence 99999998877543 3334454 6776543335544433221 1111110 0100 000 13678888
Q ss_pred HHHhhhhccCCCCCceEEEEeCccCccc-chhcHH----HHHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEE
Q 002866 288 KQISSKKRRKKDSAAGLFVFPVQSRVTG-AKYSYQ----WMALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFII 359 (872)
Q Consensus 288 ~~I~~~~rr~~~~~T~LVa~p~vSNvTG-~i~PLe----~I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv 359 (872)
++|.. ++++|.+..++|.+| ..+|-+ +.+.|+++|+++++|-++. .+.. +...+...+.+|.++
T Consensus 170 ~~l~~--------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t 241 (389)
T PRK01278 170 AAITP--------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMA 241 (389)
T ss_pred HhhCC--------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEE
Confidence 77742 588999988889899 444543 3456799999999999976 2221 112222345678654
Q ss_pred EcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 360 TSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 360 ~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
+-|.+++ | +|+++.+++.++.+.
T Consensus 242 --~sK~l~~---G~~ig~~~~~~~~~~~~~ 266 (389)
T PRK01278 242 --VAKGIGG---GFPLGACLATEEAAKGMT 266 (389)
T ss_pred --EehhccC---CcceEEEEEcHHHHhccC
Confidence 5688773 5 899988887766554
No 267
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=98.15 E-value=1.3e-05 Score=89.79 Aligned_cols=171 Identities=18% Similarity=0.156 Sum_probs=101.8
Q ss_pred HHHHHHHHHhc------CCCCCCCcEEEeCCHHHHHHHHHhhCCC----CCCCeEEEecccCchhHHHHHHHHHHcC---
Q 002866 200 HDIKTRIMDHL------NIPENEYGLVFTVSRGSAFKLLAESYPF----HTNKKLLTMFDYESQSVNWMAQSAKEKG--- 266 (872)
Q Consensus 200 eeARerIA~lL------gA~~dEY~VVFTsnATeALnLVaeslpf----~~Gd~ILT~~DhEHnSVl~~~~~AkrkG--- 266 (872)
.+.|+.||+++ +++++ +|++|+|+++|+.+++..+.- .+|+.|++..+-..... ...+...|
T Consensus 77 ~~LR~aia~~~~~~~g~~v~~~--~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y---~~~~~~~~~~~ 151 (416)
T PRK09440 77 DELIEALAALLNERYGWNISPQ--NIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGY---ADAGLEEDLFV 151 (416)
T ss_pred HHHHHHHHHHHHHHhCCCCChh--hEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhh---HHHhhccCcee
Confidence 46788888877 36665 599999999999999988742 35788876211111111 11121112
Q ss_pred -cEEEEEeccCC--CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccc
Q 002866 267 -AKVYSAWFKWP--TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGS 339 (872)
Q Consensus 267 -aeV~~Vpvd~p--~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ 339 (872)
.....++++.. ...++.++|+ +. .+++++.++.-+|.||++++.+ +++.|+++++++++|-+-
T Consensus 152 ~~~~~~~~~~~~~~~~~~d~~~l~--~~--------~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y 221 (416)
T PRK09440 152 SYRPNIELLPEGQFKYHVDFEHLH--ID--------EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAY 221 (416)
T ss_pred ecccccccccccccccCCCHHHcc--cC--------CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCc
Confidence 22223333221 1246777765 21 2478999998999999999975 345678999999999995
Q ss_pred cCCCCCcc-CCCCC--CCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 340 LGPKDMDS-LGLSL--FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 340 ~aG~~mip-LDLs~--l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
........ .++.. .+-=+++.|+-|+ +.+=.-+|.++..+++++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~~~~ 270 (416)
T PRK09440 222 GPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEIIEAL 270 (416)
T ss_pred cccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHHHHHHH
Confidence 42210000 11111 1112677899996 53223378777666554443
No 268
>PRK08637 hypothetical protein; Provisional
Probab=98.14 E-value=5.8e-05 Score=84.26 Aligned_cols=132 Identities=8% Similarity=0.061 Sum_probs=90.3
Q ss_pred HHHHHHHHHHhcC-----CCCCC-CcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHLN-----IPENE-YGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lLg-----A~~dE-Y~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
....|+.|++++. ..++. -+|++|+|+++|+.+++..+. .+||.|++..-. +..... .++...|++++.+
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~-y~~~~~--~~~~~~g~~vv~v 121 (388)
T PRK08637 46 IPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFV-DQGDTVLLPDHN-WGNYKL--TFNTRRGAEIVTY 121 (388)
T ss_pred CHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhc-CCCCEEEEcCCC-CccHHH--HHHHhcCCEEEEe
Confidence 4568888887662 33221 258999999999999999875 689998765211 111211 1123469999999
Q ss_pred eccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHH-----CCcEEEeecc
Q 002866 273 WFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQ-----NHWHVLLDAG 338 (872)
Q Consensus 273 pvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are-----~G~~VLVDAA 338 (872)
|...++..++.+++++.+... ..+.+.++.++.-+|.||+.++.+. +..|++ ++++++.|-+
T Consensus 122 ~~~~~~~~~d~~~l~~~~~~~----~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~ 192 (388)
T PRK08637 122 PIFDEDGGFDTDALKEALQAA----YNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDA 192 (388)
T ss_pred cccCCCCcCCHHHHHHHHHhh----ccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEeccc
Confidence 983223458999998887621 1124667888888999999999853 344443 8999999987
No 269
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.14 E-value=7.3e-05 Score=84.85 Aligned_cols=154 Identities=12% Similarity=0.052 Sum_probs=110.8
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.++||.. ...-+.|+.+-|+.. .++|.+|-+.+...+..-. ..|++|+...+--.....-+.+++.+.|++
T Consensus 73 r~~nPt~----~~le~~iaal~ga~~---~l~fsSGmaA~~~al~~L~--~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie 143 (409)
T KOG0053|consen 73 RSGNPTR----DVLESGIAALEGAAH---ALLFSSGMAAITVALLHLL--PAGDHIVATGDVYGGTLRILRKFLPKFGGE 143 (409)
T ss_pred cCCCCch----HHHHHHHHHHhCCce---EEEecccHHHHHHHHHHhc--CCCCcEEEeCCCcccHHHHHHHHHHHhCce
Confidence 4578864 345567888999853 4666666544444444333 468888866442234455567788889999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
+..+..+ +.+++++.+. ++|++|-+-..+|.+....||+. .+.||++|+.|+||.+=+.|. -
T Consensus 144 ~~~vd~~------~~~~~~~~i~--------~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~---~ 206 (409)
T KOG0053|consen 144 GDFVDVD------DLKKILKAIK--------ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPY---N 206 (409)
T ss_pred eeeechh------hHHHHHHhhc--------cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccc---c
Confidence 9876543 2355555554 36999999999999999999985 568899999999999965553 3
Q ss_pred CCCCCCCCcEEEEcccccCCC
Q 002866 348 LGLSLFRPDFIITSFYRVFGF 368 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~ 368 (872)
++.=.+++|.++-|.-||||+
T Consensus 207 ~~pL~lGADIV~hSaTKyi~G 227 (409)
T KOG0053|consen 207 QDPLPLGADIVVHSATKYIGG 227 (409)
T ss_pred cChhhcCCCEEEEeeeeeecC
Confidence 444456899999999999997
No 270
>PTZ00376 aspartate aminotransferase; Provisional
Probab=98.14 E-value=1.9e-05 Score=88.66 Aligned_cols=167 Identities=12% Similarity=0.090 Sum_probs=110.6
Q ss_pred HHHHHHHHHHhcC------CCCCCCcEEE--eCCHHHHHHHHHh---hCCCCCCCeEEEecccCchhHHHHHHHHHHcCc
Q 002866 199 EHDIKTRIMDHLN------IPENEYGLVF--TVSRGSAFKLLAE---SYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGA 267 (872)
Q Consensus 199 ieeARerIA~lLg------A~~dEY~VVF--TsnATeALnLVae---slpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGa 267 (872)
..+.|+.||+++. ++++ +|++ |.|+++|+.++.. .+ .++||.|++.. ++.......++..|+
T Consensus 74 ~~~lR~aia~~~~~~~~~~~~~~--~v~~~~t~G~~~al~~~~~~l~~~-~~~Gd~Vlv~~----P~y~~~~~~~~~~G~ 146 (404)
T PTZ00376 74 LQSFIEAAQKLLFGEASYALAEK--RIATVQALSGTGALRLGFEFLKRF-LPAGTTVYVSN----PTWPNHVNIFKSAGL 146 (404)
T ss_pred CHHHHHHHHHHhcCCCccccccC--eEEEeeccCcchHHHHHHHHHHHh-cCCCCEEEEcC----CCchhHHHHHHHcCC
Confidence 3478889988762 3444 4775 8999999988765 34 47899987652 233344556778899
Q ss_pred EEEEEeccC-CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccc--c
Q 002866 268 KVYSAWFKW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGS--L 340 (872)
Q Consensus 268 eV~~Vpvd~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ--~ 340 (872)
+++.+|... ++..++.+.+++.+... .++++++.++.-+|.||..++.+. +..|++++++++.|-+= +
T Consensus 147 ~~~~v~l~~~~~~~~d~~~l~~~~~~~-----~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~ 221 (404)
T PTZ00376 147 NVKEYRYYDPKTKGLDFDGMLEDLRTA-----PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGF 221 (404)
T ss_pred ceeeccccCcccCCcCHHHHHHHHHhC-----CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCc
Confidence 999999832 23568899998888531 234788999999999999999863 45678999999999882 2
Q ss_pred CCCC----Ccc-CCCCCCC-CcEEEEcccccCCCCCCceEEEE
Q 002866 341 GPKD----MDS-LGLSLFR-PDFIITSFYRVFGFDPTGFGCLL 377 (872)
Q Consensus 341 aG~~----mip-LDLs~l~-~DFlv~S~HK~fG~~PtGvG~Ly 377 (872)
.... ..+ ..+.... -=+++.|+=|.||.+=--+|.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~ 264 (404)
T PTZ00376 222 ASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALH 264 (404)
T ss_pred cCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEE
Confidence 1100 000 0011111 12778888998883112256553
No 271
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=98.13 E-value=1.9e-06 Score=93.58 Aligned_cols=197 Identities=12% Similarity=0.141 Sum_probs=128.5
Q ss_pred cCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHH--HHHHHc
Q 002866 188 ALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMA--QSAKEK 265 (872)
Q Consensus 188 ~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~--~~Akrk 265 (872)
.-||+-... .+.-+++|+++|=.. =.|.+++|.+..+.+..---++|.+|+.... .| +..|- -.+.-.
T Consensus 50 dVyGeD~tt---~rLE~~vA~l~GKEA----gLFv~SGTmgNllaIm~Hc~~rg~eii~gd~-~H--I~~~E~gg~s~l~ 119 (384)
T KOG1368|consen 50 DVYGEDPTT---NRLEQRVAELFGKEA----GLFVPSGTMGNLLAIMVHCHQRGSEIIVGDR-AH--IHRYEQGGISQLA 119 (384)
T ss_pred ccccCCccH---HHHHHHHHHHhCccc----eeeecccccccHHHHHHHhcCCCceEEeccc-hh--eeehhccChhhhc
Confidence 356653222 244568999999643 5799999999877766544467888876532 22 11111 112224
Q ss_pred CcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCccc-chhcHHHHH----HHHHCCcEEEeecccc
Q 002866 266 GAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTG-AKYSYQWMA----LAQQNHWHVLLDAGSL 340 (872)
Q Consensus 266 GaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG-~i~PLe~I~----~Are~G~~VLVDAAQ~ 340 (872)
|+.++.+.... ++-+++++++..|.........+.|+|+++---.|.+| ..+||+|+. .|+++|+.+++|+|-.
T Consensus 120 gv~~~tv~~e~-dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi 198 (384)
T KOG1368|consen 120 GVHVRTVKNEN-DGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI 198 (384)
T ss_pred cceeEeeeeCC-CCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh
Confidence 78888777654 68899999999997433234457899999998888877 999999764 4689999999999843
Q ss_pred CCCC-CccCCCCCC--CCcEEEEcccccCCCCCCceEEEEE-eCCCcccccCCCCCCCCCeE
Q 002866 341 GPKD-MDSLGLSLF--RPDFIITSFYRVFGFDPTGFGCLLI-KKSVMGSLQNQSGQTGSGMV 398 (872)
Q Consensus 341 aG~~-mipLDLs~l--~~DFlv~S~HK~fG~~PtGvG~LyV-Rk~~i~~L~P~~~~~GgGtV 398 (872)
.-.. ..-+.++++ ..|-+.+.+-|-+|+ | +|-.+| .++++..-+-..-.-||||-
T Consensus 199 ~NAavasgV~vk~i~~~fDSVsiCLSKglgA-P--VGSViVG~k~FI~kA~~~RKalGGGmR 257 (384)
T KOG1368|consen 199 FNAAVASGVPVKKICSAFDSVSICLSKGLGA-P--VGSVIVGSKDFIDKARHFRKALGGGMR 257 (384)
T ss_pred hhHHHHcCCCHHHHHHhhhhhhhhhhccCCC-C--cccEEEccHHHHHHHHHHHHHhcCchh
Confidence 2110 012333443 478899999999998 7 454444 55666443222223588875
No 272
>PRK09275 aspartate aminotransferase; Provisional
Probab=98.09 E-value=3.3e-05 Score=90.73 Aligned_cols=149 Identities=13% Similarity=0.161 Sum_probs=97.0
Q ss_pred CcEEEeCCHHHHHHHHHhhC----CCCCCCeEEEecccCchhHHHHHHHHHHc--CcEEEEEeccCC-CCccCHHHHHHH
Q 002866 217 YGLVFTVSRGSAFKLLAESY----PFHTNKKLLTMFDYESQSVNWMAQSAKEK--GAKVYSAWFKWP-TLKLCSTDLRKQ 289 (872)
Q Consensus 217 Y~VVFTsnATeALnLVaesl----pf~~Gd~ILT~~DhEHnSVl~~~~~Akrk--GaeV~~Vpvd~p-~g~Id~edLe~~ 289 (872)
.+|+.|.|+++|+..+..++ -..+||+|++..- ........++-. |++++.++.+.. +..++.++|+++
T Consensus 162 ~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P----~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~ 237 (527)
T PRK09275 162 FDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTP----IFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKL 237 (527)
T ss_pred CeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCC----ChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhh
Confidence 36999999999999888763 2578999887632 222223333333 455555554322 246788888776
Q ss_pred HhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHH--HCCcEEEeecc--ccCCCCCccCCCCCC-CCcEEEE
Q 002866 290 ISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQ--QNHWHVLLDAG--SLGPKDMDSLGLSLF-RPDFIIT 360 (872)
Q Consensus 290 I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Ar--e~G~~VLVDAA--Q~aG~~mipLDLs~l-~~DFlv~ 360 (872)
+. +++++|.+..-+|.||++++.+. +..|+ +++++|+.|-+ .+.+. ..++ ++.. .--+++.
T Consensus 238 ~~--------~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-~~s~-~~~~~~~~I~v~ 307 (527)
T PRK09275 238 RD--------PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD-FRSL-FAVLPYNTILVY 307 (527)
T ss_pred cC--------CCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc-ccCH-HHhCCCCEEEEe
Confidence 53 36888888888999999999753 34564 35999999988 23321 0111 1111 1247788
Q ss_pred cccccCCCCCCc--eEEEEEeCC
Q 002866 361 SFYRVFGFDPTG--FGCLLIKKS 381 (872)
Q Consensus 361 S~HK~fG~~PtG--vG~LyVRk~ 381 (872)
|+-|.||. +| +|.++..++
T Consensus 308 SfSK~f~m--tG~RlG~i~~~~~ 328 (527)
T PRK09275 308 SFSKYFGA--TGWRLGVIALHED 328 (527)
T ss_pred ehhhhccC--cHhHHhhhhcCch
Confidence 99999984 46 588876664
No 273
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.08 E-value=4.8e-05 Score=91.94 Aligned_cols=177 Identities=13% Similarity=0.092 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.+|.+.+|+++||+.. -..|.|+|.+++.++.+. ..+||.||+.- ..|-||..- .+.-.|++.++++-..
T Consensus 174 G~i~eAq~~AA~~fgAd~t---yFlvNGTS~gn~a~i~a~-~~~Gd~VLvdR-N~HKSv~hg--aLiLsGa~PVYl~P~~ 246 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKT---YFVLNGTSASNKVVTNAL-LTPGDLVLFDR-NNHKSNHHG--ALIQAGATPVYLETAR 246 (720)
T ss_pred hHHHHHHHHHHHHhCCCce---EEEeCChhHHHHHHHHHh-cCCCCEEEeec-ccHHHHHHH--HHHHcCCeEEEeeccc
Confidence 5678999999999999753 566789999999888876 47899988764 468888641 1123689999886544
Q ss_pred CC----CccCHHH-----HHHHHhhh-hccCCC-CCceEEEEeCccCcccchhcHHHH-HH-HHHCCcEEEeeccccCCC
Q 002866 277 PT----LKLCSTD-----LRKQISSK-KRRKKD-SAAGLFVFPVQSRVTGAKYSYQWM-AL-AQQNHWHVLLDAGSLGPK 343 (872)
Q Consensus 277 p~----g~Id~ed-----Le~~I~~~-~rr~~~-~~T~LVa~p~vSNvTG~i~PLe~I-~~-Are~G~~VLVDAAQ~aG~ 343 (872)
+. +.|+.++ |+++|... ..+... ...++++++.- +--|+.++++.| .. +|.++ .+|+|-|+.+-.
T Consensus 247 n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 247 NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC-cEEEeCcchhhh
Confidence 22 3356544 88888654 111111 12477777653 457999999855 55 47788 999999975432
Q ss_pred CCccC--CCC----CCCCc----EEEEcccccCCCCCCceEEEEEeCCCc
Q 002866 344 DMDSL--GLS----LFRPD----FIITSFYRVFGFDPTGFGCLLIKKSVM 383 (872)
Q Consensus 344 ~mipL--DLs----~l~~D----Flv~S~HK~fG~~PtGvG~LyVRk~~i 383 (872)
.-.++ ++. ..++| |++-|.||.+++ -+....|.+|.+.+
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~~i 373 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDNHI 373 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCccc
Confidence 10121 121 35899 999999999887 78888888876643
No 274
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.03 E-value=4e-05 Score=85.44 Aligned_cols=167 Identities=16% Similarity=0.190 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeC-CHHHHHHHHHhhCCCCCCC-eEEEecccCchhHHHHHHHHHHcCcEEEEEec
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTV-SRGSAFKLLAESYPFHTNK-KLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTs-nATeALnLVaeslpf~~Gd-~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv 274 (872)
.++.++++.+.++|+++ ++|.|.|.+ |+|..+.++.-++--..+- -+.+- -.+.-+..+ |++.+..+..+..
T Consensus 50 ~v~~~a~~~lreLl~iP-d~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g-~Ws~~a~~e----A~~~~~~~~~~~~ 123 (365)
T COG1932 50 NVLEEAEKDLRELLNIP-DDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTG-AWSEFAIKE----AKKVGKQPKLIDA 123 (365)
T ss_pred HHHHHHHHHHHHHhCCC-CCceEEEEcCccHHHHHHHHHhhhcccCceeEeee-ehhHhHHHH----HHHhccccccccc
Confidence 68899999999999997 469999994 5677788877766422222 23332 223333333 3433321211111
Q ss_pred ---cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH-HHHHHHHHCCcEEEeeccccCCCCCccCCC
Q 002866 275 ---KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY-QWMALAQQNHWHVLLDAGSLGPKDMDSLGL 350 (872)
Q Consensus 275 ---d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL-e~I~~Are~G~~VLVDAAQ~aG~~mipLDL 350 (872)
..+-+.|. ++.+.- ...+...|++++-...+|+.+|- ..+. .+..+++|+++.+.- .++|+
T Consensus 124 ~~~~~~~~~iP--~~~~~~-------~~~~~ayv~~~~NeTi~Gv~v~~~p~~~----~~~~~v~D~SS~ils--r~iDv 188 (365)
T COG1932 124 RIEEAGYGSIP--DLSKWD-------FSDNDAYVHFCWNETISGVEVPELPDIG----SDGLLVADASSAILS--RPIDV 188 (365)
T ss_pred ceeccCccCCC--Chhhcc-------cCCCccEEEEecCCcccceEccCCCCCC----CCceEEEecccHHhc--CCCCh
Confidence 11112221 111100 11125678888877788999883 1221 127899999987765 48999
Q ss_pred CCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 351 SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+++ |.+.++..|.+| |.|+++++||+++++++++
T Consensus 189 sk~--dviyagaQKnlG--paGltvvIvr~~~l~r~~~ 222 (365)
T COG1932 189 SKY--DVIYAGAQKNLG--PAGLTVVIVRPDLLERAES 222 (365)
T ss_pred hHc--ceEEEehhhccC--ccceEEEEEcHHHHhcccc
Confidence 865 999999999999 8999999999999887764
No 275
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=98.02 E-value=6.9e-05 Score=83.90 Aligned_cols=129 Identities=14% Similarity=0.027 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHhcCCCCC----CCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 197 TVEHDIKTRIMDHLNIPEN----EYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~d----EY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
.-+..||++||++++-+.+ ..+|+.|+|+++|+.+++.++. ++|.+||.+- +...+.-..|.-.|++|+..
T Consensus 103 ~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA-~p~aNILlPr----PGfp~Y~~~a~~~~lEVR~y 177 (447)
T KOG0259|consen 103 VGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA-NPGANILLPR----PGFPLYDTRAIYSGLEVRYY 177 (447)
T ss_pred cccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc-CCCCceecCC----CCCchHHHhhhhcCceeEee
Confidence 3456899999999874321 1259999999999999999987 7888988752 33333344567789999987
Q ss_pred ec-cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecc
Q 002866 273 WF-KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAG 338 (872)
Q Consensus 273 pv-d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAA 338 (872)
.+ ...+-+||++.++.++.. +|.-+.+---+|.+|.+|..+ ++..|++.|+.|+-|=+
T Consensus 178 dlLPe~~weIDL~~veal~DE--------NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEV 240 (447)
T KOG0259|consen 178 DLLPEKDWEIDLDGVEALADE--------NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEV 240 (447)
T ss_pred cccCcccceechHHHHHhhcc--------CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhh
Confidence 65 222457899999988864 577777778899999999985 34567999999998865
No 276
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.02 E-value=7.6e-05 Score=82.26 Aligned_cols=159 Identities=11% Similarity=0.101 Sum_probs=103.9
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCC
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTL 279 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g 279 (872)
.+.|+.||+++|+++.+ +|++|+|+++++.++... +.+|+ +++. .++.......++..|+++..++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~-~I~i~~Gs~e~i~~l~~~--~~~g~-v~v~----~P~y~~y~~~~~~~g~~~~~v~~~~--- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAA-HVLPVAGSQAAIRALPAL--LPRGR-VGIA----PLAYSEYAPAFARHGHRVVPLDEAA--- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcc-cEEECcCHHHHHHHHHHh--cCCCe-EEEc----CCCcHHHHHHHHHCCCEEEeecccc---
Confidence 58999999999997422 599999999999988654 45665 5543 1334444556677899988776542
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHH----HHHHCCcEEEeeccc--cCCCCCccC-CCCC
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMA----LAQQNHWHVLLDAGS--LGPKDMDSL-GLSL 352 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~----~Are~G~~VLVDAAQ--~aG~~mipL-DLs~ 352 (872)
+ .+.. .++++.++.-+|.||+.++.+.+. .+.+++.++++|-+- +... .++ .+..
T Consensus 125 ----~----~~~~--------~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~--~s~~~~~~ 186 (339)
T PRK06959 125 ----D----TLPA--------ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA--ASLAAHTD 186 (339)
T ss_pred ----h----hccc--------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc--ccchhccC
Confidence 1 1211 245666666789999999987443 345678888999872 2221 011 1111
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 353 FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.+-=+++.|+=|.||-+=--+|.++..++.++.+.
T Consensus 187 ~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~ 221 (339)
T PRK06959 187 RPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALR 221 (339)
T ss_pred CCCEEEEecChhhcCCcchheEEEecCHHHHHHHH
Confidence 11127888999999841123799988777766554
No 277
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=97.96 E-value=0.00013 Score=80.96 Aligned_cols=172 Identities=10% Similarity=0.074 Sum_probs=102.0
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHHHH----c--CcEEEEE
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSAKE----K--GAKVYSA 272 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~Akr----k--GaeV~~V 272 (872)
...++.+|+.|...++. -++|++++|+|+....... .+..+++|++.....|.+.......... . +..+..+
T Consensus 69 ~~~~~~la~~l~~~~~~-~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (375)
T PRK04260 69 NSLQEEVAQKLIGDKDY-LAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHF 147 (375)
T ss_pred CHHHHHHHHHHhcCcCC-EEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCe
Confidence 45777888866544332 3689999999988554432 2234556776544446655443221110 1 1111101
Q ss_pred eccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeecccc-CCCC--
Q 002866 273 WFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSL-GPKD-- 344 (872)
Q Consensus 273 pvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~-aG~~-- 344 (872)
+... ..+.+++++++. .++.+|.+..+.+.+|.+.| ++ ....|+++|+++++|.++. .|..
T Consensus 148 ~~~~---~~dl~~l~~~l~--------~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~ 216 (375)
T PRK04260 148 SYAI---FNDLNSVKALVN--------KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGK 216 (375)
T ss_pred EEeC---CCCHHHHHHhcC--------CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc
Confidence 1000 125677776653 24789999999999999887 55 4567899999999999974 2211
Q ss_pred CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 345 MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 345 mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
+.......+.||.+ ++-|.++. -.-+|+++.+++..+.+
T Consensus 217 ~~~~~~~~~~pdi~--t~sK~l~~-G~~ig~~~~~~~~~~~~ 255 (375)
T PRK04260 217 LYAFEHYGIEPDIF--TLAKGLAN-GVPVGAMLAKSSLGGAF 255 (375)
T ss_pred hhhhHhhCCCCCEE--EecccccC-CcceEEEEEcHHHHhhc
Confidence 01112234578954 68898872 01289999888765544
No 278
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=97.96 E-value=0.00041 Score=77.89 Aligned_cols=197 Identities=14% Similarity=0.081 Sum_probs=134.7
Q ss_pred CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch-HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCC
Q 002866 161 FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK-GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFH 239 (872)
Q Consensus 161 ~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS-~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~ 239 (872)
.|+.+++|+.+ .. .|..||-|.. .+.++.+..-..+--+-......|+|+++.--++.++++.+. +
T Consensus 39 ~pp~i~~Al~~--------rv----dhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T-~ 105 (388)
T COG1168 39 TPPEIIEALRE--------RV----DHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT-K 105 (388)
T ss_pred CCHHHHHHHHH--------HH----hcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC-c
Confidence 45677777432 11 1456776643 346666776666655544333369999999999999999986 7
Q ss_pred CCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCcc--CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccch
Q 002866 240 TNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKL--CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAK 317 (872)
Q Consensus 240 ~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~I--d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i 317 (872)
+||.|++.. +...+....-+..|-++...|+...+++. |.++|++.+.. ++++|+.++.-+|.||.+
T Consensus 106 ~gd~Vvi~t----PvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~-------~~vkl~iLCnPHNP~Grv 174 (388)
T COG1168 106 PGDGVVIQT----PVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD-------ERVKLFILCNPHNPTGRV 174 (388)
T ss_pred CCCeeEecC----CCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc-------CCccEEEEeCCCCCCCcc
Confidence 899987653 23345556667788899999987666665 99999998864 357999999999999999
Q ss_pred hcHHHH----HHHHHCCcEEEeecccc----CCCCCccCC-CCCCCCc--EEEEcccccCCCCCCceEEEEEeCC
Q 002866 318 YSYQWM----ALAQQNHWHVLLDAGSL----GPKDMDSLG-LSLFRPD--FIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 318 ~PLe~I----~~Are~G~~VLVDAAQ~----aG~~mipLD-Ls~l~~D--Flv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
..-+++ .+|++||+.|+.|=.++ .|+.++++. |+.-..| +.+.|.-|.|.-+-..++.+++.++
T Consensus 175 wt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~ 249 (388)
T COG1168 175 WTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNR 249 (388)
T ss_pred ccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCH
Confidence 997643 46799999999998863 443234443 4333233 5666778987731122344555444
No 279
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.95 E-value=0.00039 Score=79.24 Aligned_cols=154 Identities=14% Similarity=0.060 Sum_probs=111.0
Q ss_pred CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecc-cCchhHHHHHHHHHHcCc
Q 002866 189 LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFD-YESQSVNWMAQSAKEKGA 267 (872)
Q Consensus 189 ~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~D-hEHnSVl~~~~~AkrkGa 267 (872)
.++||.. ...-++++.+=|+.. .+-++++-.|+..+.-.+ +++||+||...+ |. ....-.....++.|+
T Consensus 59 R~~nPT~----~~lE~~~a~LEg~~~----~~afsSGmaAI~~~~l~l-l~~GD~vl~~~~~YG-~t~~~~~~~l~~~gi 128 (396)
T COG0626 59 RTGNPTR----DALEEALAELEGGED----AFAFSSGMAAISTALLAL-LKAGDHVLLPDDLYG-GTYRLFEKILQKFGV 128 (396)
T ss_pred cCCCccH----HHHHHHHHHhhCCCc----EEEecCcHHHHHHHHHHh-cCCCCEEEecCCccc-hHHHHHHHHHHhcCe
Confidence 4578864 234456777777632 455677778888877666 477999987765 43 333334456778899
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCc
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
++.++... +.+++.+++.+ ++|++|-+-.-+|.+-.++||.. .+.||++|+.++||-+=+.|.-.-
T Consensus 129 ~~~~~d~~------~~~~~~~~~~~-------~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~ 195 (396)
T COG0626 129 EVTFVDPG------DDEALEAAIKE-------PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQR 195 (396)
T ss_pred EEEEECCC------ChHHHHHHhcc-------cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccC
Confidence 99987532 23455555541 36999999999999999999985 567899999999999976664223
Q ss_pred cCCCCCCCCcEEEEcccccCCC
Q 002866 347 SLGLSLFRPDFIITSFYRVFGF 368 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~ 368 (872)
|++ +++|.++=|+-|.+|+
T Consensus 196 PL~---~GaDIVvhSaTKyl~G 214 (396)
T COG0626 196 PLE---LGADIVVHSATKYLGG 214 (396)
T ss_pred hhh---cCCCEEEEeccccccC
Confidence 443 5899999999999886
No 280
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=97.95 E-value=0.00025 Score=78.65 Aligned_cols=172 Identities=12% Similarity=0.103 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC-CC-----CCCeEEEecccCchhHHHHHHHHHHcCcEEE
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP-FH-----TNKKLLTMFDYESQSVNWMAQSAKEKGAKVY 270 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp-f~-----~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~ 270 (872)
....+..++++++.+. + .|+||+|+++|+.++..... +. ..++|++....-|......... .|....
T Consensus 81 ~~~~~la~~l~~~~~~--~--~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~---~~~~~~ 153 (396)
T PRK02627 81 EPQEELAEKLVELSGM--D--KVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSA---TGQPKY 153 (396)
T ss_pred HHHHHHHHHHHhhcCC--C--EEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHh---cCCccc
Confidence 3445666777877665 3 59999999999998877431 11 1145665432223322221111 111111
Q ss_pred ---EEeccCCCC----ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccc-hhcH---H-HHHHHHHCCcEEEeecc
Q 002866 271 ---SAWFKWPTL----KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGA-KYSY---Q-WMALAQQNHWHVLLDAG 338 (872)
Q Consensus 271 ---~Vpvd~p~g----~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~-i~PL---e-~I~~Are~G~~VLVDAA 338 (872)
..++.. +. ..+.+++++++. +++++|.+..+.|.+|. .+|. + +.+.|+++|+++++|-+
T Consensus 154 ~~~~~~~~~-~~~~~~~~d~~~l~~~i~--------~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~ 224 (396)
T PRK02627 154 QEGFEPLVE-GFIYVPFNDIEALKAAIT--------DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEV 224 (396)
T ss_pred cccCCCCCC-CceEeCCCCHHHHHHhcC--------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 111110 00 016777877773 25888888888889984 5554 3 34567999999999999
Q ss_pred cc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 339 SL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 339 Q~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
+. .+.. +..++.....+|.+++| |.+|+ .--+|+++.+++.++.+.
T Consensus 225 ~~g~g~~g~~~~~~~~~~~pdi~t~s--K~~~~-G~rig~~~~~~~~~~~~~ 273 (396)
T PRK02627 225 QTGMGRTGKLFAYQHYGIEPDIMTLA--KGLGG-GVPIGAVLAKEKVADVFT 273 (396)
T ss_pred hcCCCccCceeeehhcCCCCCEEEEc--chhhC-CcccEEEEEcHHHHhccC
Confidence 75 3321 11233334568877655 98874 234899988877665543
No 281
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=97.90 E-value=0.00026 Score=80.51 Aligned_cols=161 Identities=13% Similarity=0.141 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....+.=++||+|+|... .|+|++|-+.-+-+ +.++. +++|-|+.. +..|.|+. .-++-.+++++..+ .
T Consensus 84 ~~h~~LE~~lA~f~g~e~---al~f~SGy~AN~~~-i~~l~-~~~dli~~D-~lnHASii---dG~rls~a~~~~f~--H 152 (388)
T COG0156 84 DLHVELEEELADFLGAEA---ALLFSSGFVANLGL-LSALL-KKGDLIFSD-ELNHASII---DGIRLSRAEVRRFK--H 152 (388)
T ss_pred HHHHHHHHHHHHHhCCCc---EEEEcccchhHHHH-HHHhc-CCCcEEEEe-chhhhhHH---HHHHhCCCcEEEec--C
Confidence 456677889999999964 59999987665444 33443 456656654 56677754 33444567776543 2
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCc--------c
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMD--------S 347 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mi--------p 347 (872)
.|.++|+++|.+.+. ... +.++|++..+-++.|.+-||. ++.++++++++++||=|+++|. +. .
T Consensus 153 ----nD~~~Le~~l~~~~~-~~~-~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv-~G~~GrG~~e~ 225 (388)
T COG0156 153 ----NDLDHLEALLEEARE-NGA-RRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGV-LGPNGRGLAEH 225 (388)
T ss_pred ----CCHHHHHHHHHhhhc-cCC-CceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccc-cCCCCccHHHH
Confidence 467999999976321 111 578999999999999999997 5678899999999999998774 11 2
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIK 379 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVR 379 (872)
+.+....+|+++.++-|-||. .|+.+.-
T Consensus 226 ~g~~~~~vdi~~gTlsKAlGs----~Gg~v~g 253 (388)
T COG0156 226 FGLEPEEVDIIVGTLGKALGS----SGGYIAG 253 (388)
T ss_pred hCCCCccceEEEEEchhhhcc----cCceeeC
Confidence 334445569999999999983 5655543
No 282
>PLN02672 methionine S-methyltransferase
Probab=97.89 E-value=0.00038 Score=87.54 Aligned_cols=165 Identities=15% Similarity=0.058 Sum_probs=111.4
Q ss_pred ceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCC-CCcEEEeCCHHH
Q 002866 150 KVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPEN-EYGLVFTVSRGS 227 (872)
Q Consensus 150 ~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~d-EY~VVFTsnATe 227 (872)
.+.||.+-... +|+.+++++.+ .+... + ..++.| +....+++.+++..|.+.+ +..|++|+|+++
T Consensus 699 vI~LsinE~d~ppPp~V~eAi~e-------al~~~--~-~s~g~p---dlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~e 765 (1082)
T PLN02672 699 LIHMDVDESFLPVPSAVKASIFE-------SFVRQ--N-ISESET---DPRPSILQFIKSNYGFPTDSCTEFVYGDTSLA 765 (1082)
T ss_pred EEEEeCCCCCCCCCHHHHHHHHH-------HHhhc--C-CCCCCh---HHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHH
Confidence 68888776553 55666666432 11110 0 112222 3457788888888888654 126999999999
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-CCCccCHHHHHHHHhhhhccCCCCCceEEE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW-PTLKLCSTDLRKQISSKKRRKKDSAAGLFV 306 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~-p~g~Id~edLe~~I~~~~rr~~~~~T~LVa 306 (872)
++.++...+- ++||.|++.. ++.......++..|++++.+|.+. .+..++.++|++++... +++++.
T Consensus 766 lL~lll~aLl-~pGD~VLVp~----PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~-------~~~~I~ 833 (1082)
T PLN02672 766 LFNKLVLCCV-QEGGTLCFPA----GSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV-------KKPWVY 833 (1082)
T ss_pred HHHHHHHHHc-CCCCEEEEeC----CChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC-------CCCEEE
Confidence 9999988874 6899988652 233344455677899999999863 24567888998888531 122344
Q ss_pred EeCc-cCcccchhcHHH----HHHHHHCCcEEEeeccc
Q 002866 307 FPVQ-SRVTGAKYSYQW----MALAQQNHWHVLLDAGS 339 (872)
Q Consensus 307 ~p~v-SNvTG~i~PLe~----I~~Are~G~~VLVDAAQ 339 (872)
+..- +|.||.+++.+. +..|++++++|++|-+-
T Consensus 834 L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaY 871 (1082)
T PLN02672 834 ISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSF 871 (1082)
T ss_pred EECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCC
Confidence 4333 399999999864 35568999999999984
No 283
>PLN02955 8-amino-7-oxononanoate synthase
Probab=97.86 E-value=0.00025 Score=82.51 Aligned_cols=170 Identities=12% Similarity=0.064 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC------------CC-CCCCeEEEecccCchhHHHHHHHHH
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY------------PF-HTNKKLLTMFDYESQSVNWMAQSAK 263 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl------------pf-~~Gd~ILT~~DhEHnSVl~~~~~Ak 263 (872)
...++.=++||+|+|.+. .|+|.+|-.. ...++..+ |. .+++.|++. ...|.|+..-.+.++
T Consensus 147 ~~h~~LE~~LA~f~g~e~---all~sSGy~A-N~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D-~~~HaSI~dG~~ls~ 221 (476)
T PLN02955 147 TYHRLLESSLADLKKKED---CLVCPTGFAA-NMAAMVAIGSVASLLAASGKPLKNEKVAIFSD-ALNHASIIDGVRLAE 221 (476)
T ss_pred HHHHHHHHHHHHHHCCCc---EEEECChHHH-HHHHHHHHhhccccccccccccCCCCcEEEEe-ccchHHHHHHHHhcc
Confidence 455678889999999853 3666655544 33333222 11 123334443 356888865455555
Q ss_pred Hc-CcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccC
Q 002866 264 EK-GAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLG 341 (872)
Q Consensus 264 rk-GaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~a 341 (872)
++ |+++...+ . .|.++|+++|.... .+..+|++..+-++.|.+.|+++ +..++++|+.++||=|+..
T Consensus 222 ~~~~a~~~~f~--H----ND~~~Le~~L~~~~-----~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~ 290 (476)
T PLN02955 222 RQGNVEVFVYR--H----CDMYHLNSLLSSCK-----MKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGT 290 (476)
T ss_pred ccCCceEEEeC--C----CCHHHHHHHHHhCC-----CCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccC
Confidence 44 47776544 2 26899999886531 24579999999999999999975 5677899999999999875
Q ss_pred CCCCc--------cCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 342 PKDMD--------SLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 342 G~~mi--------pLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
|. .- .+++. -.+|+++.++=|.||. . -|++..+++.++.|+
T Consensus 291 Gv-~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~-~--GGfi~gs~~~~~~l~ 339 (476)
T PLN02955 291 FV-CGENGGGVAEEFNCE-ADVDLCVGTLSKAAGC-H--GGFIACSKKWKQLIQ 339 (476)
T ss_pred ce-ecCCCCcHHHHhCCC-CCCcEEEEeCccchhc-c--CceeecHHHHHHHHH
Confidence 52 01 13332 3689999999999984 2 345566666666665
No 284
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=97.72 E-value=0.0013 Score=73.84 Aligned_cols=173 Identities=8% Similarity=0.066 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC-CC-------CCCC-eEEEecccCchhHHHHHHHHH----
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY-PF-------HTNK-KLLTMFDYESQSVNWMAQSAK---- 263 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl-pf-------~~Gd-~ILT~~DhEHnSVl~~~~~Ak---- 263 (872)
....++-++++++++. + .+.|+.++++|+..+.... .+ .+|+ .|++...-.|.+...-.....
T Consensus 79 ~~~~~l~~~l~~~~~~--~--~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~ 154 (401)
T TIGR01885 79 DVFGEFAEYVTKLFGY--D--KVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDS 154 (401)
T ss_pred HHHHHHHHHHHhhcCC--C--EEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccc
Confidence 4456777889999874 2 4999999999877665542 11 1334 455543322544332111111
Q ss_pred --HcC---cEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEE
Q 002866 264 --EKG---AKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHV 333 (872)
Q Consensus 264 --rkG---aeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~V 333 (872)
..| ..+..+ .++ +.++|+++|... ..++..|.+-.+.+.+|.+.| ++. .+.|+++|+++
T Consensus 155 ~~~~~~~~~~~~~~--~~~----d~~~le~~l~~~-----~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~ll 223 (401)
T TIGR01885 155 RTNFGPYVPGFKKI--PYN----NLEALEEALEDH-----GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLL 223 (401)
T ss_pred ccccCCCCCCceEe--CCC----CHHHHHHHHHhc-----CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 012 112222 222 578888888532 235778888888899999998 764 56789999999
Q ss_pred Eeecccc-CCC--CCccCCCCCCCCcEEEEcccccCCCCC-CceEEEEEeCCCccccc
Q 002866 334 LLDAGSL-GPK--DMDSLGLSLFRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 334 LVDAAQ~-aG~--~mipLDLs~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~ 387 (872)
++|-++. .|. .+..++.....+|.+++| |-+++ . .-+|++..++++++.+.
T Consensus 224 i~DEv~~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~-g~~~ig~v~~~~~i~~~~~ 278 (401)
T TIGR01885 224 IADEIQTGLGRTGKLLCVDHENVKPDIVLLG--KALSG-GVYPVSAVLADDDVMLTIK 278 (401)
T ss_pred EEechhhCCCccchhhHHhhcCCCCCEEEee--ccccC-CCCCcEEEEEcHHHHhhcc
Confidence 9999964 221 011233334678988876 97763 1 12677777776665443
No 285
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.70 E-value=0.00023 Score=80.26 Aligned_cols=214 Identities=12% Similarity=0.078 Sum_probs=127.3
Q ss_pred CCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch-HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHh
Q 002866 156 CGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK-GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAE 234 (872)
Q Consensus 156 AAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS-~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVae 234 (872)
|+=...++.|++++-. .|. ..+..-....-+||.-.. ..+..-+.++..++||++-.+ |=--+++.|...|..
T Consensus 33 ASEN~~S~aV~~A~gS--~lt-nKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~an---VQPhSGs~AN~av~~ 106 (413)
T COG0112 33 ASENFTSPAVMEAQGS--DLT-NKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYAN---VQPHSGSQANQAVYL 106 (413)
T ss_pred eccccCCHHHHHHHhh--hhh-hccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccc---cCCCCchHHHHHHHH
Confidence 3444578888887421 111 001111111123333322 345566999999999996432 334566778777777
Q ss_pred hCCCCCCCeEEEec-cc-CchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccC
Q 002866 235 SYPFHTNKKLLTMF-DY-ESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSR 312 (872)
Q Consensus 235 slpf~~Gd~ILT~~-Dh-EHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSN 312 (872)
++ .++||.|+... .| -|-+--.-..+.-.. .++..-+++..++.||.+++++++... +.+|+++-. |
T Consensus 107 Al-l~pGDtimgm~l~~GGHltHg~~v~~sG~~-~~~v~Y~vd~et~~IDyD~~~k~a~e~-------kPK~ii~G~-S- 175 (413)
T COG0112 107 AL-LQPGDTIMGLDLSHGGHLTHGSPVNFSGKL-FNVVSYGVDPETGLIDYDEVEKLAKEV-------KPKLIIAGG-S- 175 (413)
T ss_pred HH-cCCCCeEecccCCCCCcccCCCCCCcccee-EEeEecccccccCccCHHHHHHHHHHh-------CCCEEEECc-c-
Confidence 76 47899987442 11 111100001111111 556666788778999999999988764 356666532 2
Q ss_pred cccchhcHHHHH-HHHHCCcEEEeeccccCCC---CCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeC-CCccccc
Q 002866 313 VTGAKYSYQWMA-LAQQNHWHVLLDAGSLGPK---DMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKK-SVMGSLQ 387 (872)
Q Consensus 313 vTG~i~PLe~I~-~Are~G~~VLVDAAQ~aG~---~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk-~~i~~L~ 387 (872)
.--..+|++.++ +|.+.|+++++|+|+.+|. ...|=.|. .+|+++.+.||.|.+ |.| |+++.++ ++...+.
T Consensus 176 aY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKTlrG-PrG-G~Il~~~eel~kkin 251 (413)
T COG0112 176 AYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKTLRG-PRG-GIILTNDEELAKKIN 251 (413)
T ss_pred ccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccCCCC-CCc-eEEEeccHHHHHHhh
Confidence 223466776665 5689999999999986542 00232333 299999999999888 886 4444554 6667776
Q ss_pred CCC
Q 002866 388 NQS 390 (872)
Q Consensus 388 P~~ 390 (872)
...
T Consensus 252 ~aV 254 (413)
T COG0112 252 SAV 254 (413)
T ss_pred hhc
Confidence 543
No 286
>PLN02624 ornithine-delta-aminotransferase
Probab=97.69 E-value=0.00074 Score=78.34 Aligned_cols=173 Identities=12% Similarity=0.120 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHh---hCCC-C----CCCe-EEEecccCchhHHHHHHHH----HH
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAE---SYPF-H----TNKK-LLTMFDYESQSVNWMAQSA----KE 264 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVae---slpf-~----~Gd~-ILT~~DhEHnSVl~~~~~A----kr 264 (872)
...+.-++++++++. + .+.|+.++++|+..... .+.. . +++. |+.....-|.......... .+
T Consensus 118 ~~~~la~~L~~~~~~--~--~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~ 193 (474)
T PLN02624 118 KFPEFAEYLTSMFGY--D--MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEAT 193 (474)
T ss_pred HHHHHHHHHHhhcCC--C--eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCcccc
Confidence 334566778888764 2 59999999997665443 2210 1 1333 4444321233322211110 01
Q ss_pred cC-----cEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEE
Q 002866 265 KG-----AKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVL 334 (872)
Q Consensus 265 kG-----aeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VL 334 (872)
.+ ..+..+|.. +.+.|++++... ..++..|.+..+.|.+|.++| ++. .+.|+++|++++
T Consensus 194 ~~~~~~~~~~~~~~~~------d~~~l~~~l~~~-----~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI 262 (474)
T PLN02624 194 RGFGPLLPGHLKVDFG------DLDALEKIFEED-----GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMI 262 (474)
T ss_pred ccCCCCCCCceEeCCC------CHHHHHHHHHhC-----CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 11 112233321 467888877531 246889999999999999999 764 467899999999
Q ss_pred eecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 335 LDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 335 VDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
+|-+|. .|.. +...+.....||++++| |-+|+.-.-+|+++++++++..+.
T Consensus 263 ~DEv~tG~GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~~~~i~~~~~ 316 (474)
T PLN02624 263 ADEIQTGLARTGKMLACDWEEVRPDVVILG--KALGGGVIPVSAVLADKDVMLCIK 316 (474)
T ss_pred EeccccCcCcCcchhhHHhcCCCCCEEEec--ccccCCCCcceeeeecHHHHhHhc
Confidence 999986 3210 12334455689999987 877751134788888776655443
No 287
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.68 E-value=0.00037 Score=79.77 Aligned_cols=174 Identities=13% Similarity=0.037 Sum_probs=123.2
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC---CCC-CC---CeEEEecccCchhHHHHHHHHHHc
Q 002866 193 AEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY---PFH-TN---KKLLTMFDYESQSVNWMAQSAKEK 265 (872)
Q Consensus 193 psS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl---pf~-~G---d~ILT~~DhEHnSVl~~~~~Akrk 265 (872)
|....+..++=+-++.+||+++++.... |.|.|+|+-+.-..+ ..+ +| -++++.. +....|-.+|+.-
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~~~~~g~~-t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~----~v~~a~eK~a~yf 190 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAPSDSCGCG-TVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQ----NVHAAFEKAARYF 190 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCCccccCcc-ccccchHHHHHHHHHHHHHHhccCCCCccccchH----HHHHHHHHHHhhE
Confidence 3334566777788999999997653333 567777732222222 111 12 1244442 2233566777778
Q ss_pred CcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHH-CCcEEEeeccccCCC
Q 002866 266 GAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQ-NHWHVLLDAGSLGPK 343 (872)
Q Consensus 266 GaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are-~G~~VLVDAAQ~aG~ 343 (872)
+++++.+|++..+.++|+.++.+.+.. +|.+++...-+-.+|.+=|++. ..++.+ .++.+++||+-. |.
T Consensus 191 ~v~l~~V~~~~~~~~~D~~k~~~~i~e--------Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~G-gF 261 (491)
T KOG1383|consen 191 EVELREVPLDEGDYRVDPGKVVRMIDE--------NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLG-GF 261 (491)
T ss_pred EEEEEeeeccccceEecHHHHHHHhcc--------ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCc-cc
Confidence 999999999977788999999888864 6999999999999999999985 456666 999999999942 21
Q ss_pred -------CCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 344 -------DMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 344 -------~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
.+.++|+..-++--+.+++||.... |.|+|..+-|..
T Consensus 262 i~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~-~~G~~~vl~r~k 305 (491)
T KOG1383|consen 262 INPAGYLNEEEFDFRVPGVTSISADGHKYGLA-PAGSSWVLYRNK 305 (491)
T ss_pred cccccccCccccccCCCCceeEeeccceeeee-ecCcEEEEEccc
Confidence 1125777777888899999995334 999998665554
No 288
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=97.65 E-value=0.0013 Score=79.76 Aligned_cols=169 Identities=11% Similarity=0.045 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.+|.+.+|+++||+.. -..|.|+|.+++.++.+. ..+||.||+.- ..|-||..- +.-.|++.++++..+
T Consensus 195 G~i~eAe~~aA~~fgAd~t---yfvvNGTS~~n~av~~a~-~~~Gd~VLvdR-N~HKSv~~a---Lilsga~PVYl~P~~ 266 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQS---YIVTNGTSTSNKIVGMYA-APAGSTLLIDR-NCHKSLAHL---LMMSDVVPIWLKPTR 266 (713)
T ss_pred hHHHHHHHHHHHHhCCCcE---EEEeCChHHHHHHHHHHh-cCCCCEEEeec-ccHHHHHHH---HHHcCCeeEEecccc
Confidence 5778899999999999753 566788899999888876 57899988764 468888653 334689999986544
Q ss_pred CC----CccCH-----HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHH-HHHHCCcEE-EeeccccCCCCC
Q 002866 277 PT----LKLCS-----TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMA-LAQQNHWHV-LLDAGSLGPKDM 345 (872)
Q Consensus 277 p~----g~Id~-----edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~-~Are~G~~V-LVDAAQ~aG~~m 345 (872)
+. +.|+. +.++++|..... . .+.+.++++. ++--|+.++++.|. .+ |+.+ |+|.|+.+-..-
T Consensus 267 n~~Gi~g~I~~~~~~~e~I~~~i~~~p~-~--~~p~~vvit~-pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F 339 (713)
T PRK15399 267 NALGILGGIPRREFTRDSIEEKVAATTQ-A--QWPVHAVITN-STYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHF 339 (713)
T ss_pred cccCCcCCCChhhccHHHHHHHHHhCCC-c--CCceEEEEEC-CCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhc
Confidence 22 23455 888888875321 1 1224555554 35689999998654 44 6666 799997542100
Q ss_pred cc--CCCCCC----CCcEE---EEcccccCCCCCCceEEEEEeCC
Q 002866 346 DS--LGLSLF----RPDFI---ITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 346 ip--LDLs~l----~~DFl---v~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
.| .+.+.+ ++|.+ +-|.||.+++ -+....|-||..
T Consensus 340 ~p~~~~~sam~~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~ 383 (713)
T PRK15399 340 HPIYQGKSGMSGERVPGKVIFETQSTHKMLAA-FSQASLIHIKGE 383 (713)
T ss_pred CcccCCcChhhCCCCCCeeeeeeeehhccccc-cchheeeeecCC
Confidence 12 112222 35666 9999999887 888889988764
No 289
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=97.65 E-value=0.00073 Score=74.85 Aligned_cols=166 Identities=12% Similarity=0.091 Sum_probs=95.1
Q ss_pred HHHHHHHHhcCCCC-CCCcEEEeCCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHHHHcCc---------EE
Q 002866 201 DIKTRIMDHLNIPE-NEYGLVFTVSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSAKEKGA---------KV 269 (872)
Q Consensus 201 eARerIA~lLgA~~-dEY~VVFTsnATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGa---------eV 269 (872)
+.+.+++++++... .+ .++|++++++|+..+.... .+...++|++.....|.+............. .+
T Consensus 71 ~~~~~la~~l~~~~~~~-~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (377)
T PRK02936 71 SLQEEVASLLAENSAGD-LVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGF 149 (377)
T ss_pred HHHHHHHHHHHhcCCCC-EEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCc
Confidence 34555555555321 12 5999999999988776632 1222345666543345544433221110000 11
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeecccc-CCC
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSL-GPK 343 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~-aG~ 343 (872)
..+|.+ +.+++++.+. +++++|.+..+.+.+|...+ ++ ....|+++|+++++|-++. .|.
T Consensus 150 ~~~~~~------d~~~l~~~~~--------~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~ 215 (377)
T PRK02936 150 THVPFN------DIKALKEVMN--------EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGR 215 (377)
T ss_pred eEeCCC------CHHHHHHhcc--------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 222211 4677777664 24789999888888887643 54 3467899999999999974 221
Q ss_pred C--CccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccc
Q 002866 344 D--MDSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSL 386 (872)
Q Consensus 344 ~--mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L 386 (872)
. +..+......+|.+ ++-|.++. | +|++..+++..+.+
T Consensus 216 ~g~~~~~~~~~~~~di~--t~sK~l~~---G~~ig~v~~~~~~~~~~ 257 (377)
T PRK02936 216 TGTLFAYEQFGLDPDIV--TVAKGLGN---GIPVGAMIGKKELGTAF 257 (377)
T ss_pred CchhhHHHhhCCCCcEE--EEcccccC---CCccEEEEEcHHHHhhc
Confidence 1 11111223457854 57898873 5 78887777665544
No 290
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=97.62 E-value=0.00052 Score=83.20 Aligned_cols=170 Identities=9% Similarity=0.028 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.+|.+.+|+++||+.. -..|.|+|.|++.++.+. ..+||.||+.- ..|-||..- +.-.|++.++++..+
T Consensus 195 G~i~eAe~~AA~~fgAd~t---yfvvNGTS~~n~av~~a~-~~~Gd~VLvdR-N~HKSv~ha---Lilsga~PVYl~P~r 266 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRS---YMVTNGTSTANKIVGMYS-APAGSTVLIDR-NCHKSLTHL---MMMSDVTPIYFRPTR 266 (714)
T ss_pred hHHHHHHHHHHHHhCCCcE---EEEeCchHHHHHHHHHHh-cCCCCEEEeec-ccHHHHHHH---HHHcCCeEEEecccc
Confidence 5778999999999999753 566788888988888876 47899988764 468888653 334699999986554
Q ss_pred CC----CccC-----HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCc
Q 002866 277 PT----LKLC-----STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 277 p~----g~Id-----~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
+. +.|+ .+.++++|..... . .+...++++. ++--|+.++++.| ..++.++ +|+|-|+.+-..-.
T Consensus 267 n~~Gi~g~I~~~~~~~e~i~~~i~~~p~-a--k~p~~~vit~-pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~ 340 (714)
T PRK15400 267 NAYGILGGIPQSEFQHATIAKRVKETPN-A--TWPVHAVITN-STYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFS 340 (714)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCcc-c--cCccEEEEEC-CCCccEecCHHHHHHHhCCCC--EEEEccchhhhccC
Confidence 32 2345 7888888875321 1 1122455543 4668999999854 6778777 79999975421001
Q ss_pred c-C-CCCC--CCC---c--EEEEcccccCCCCCCceEEEEEeCC
Q 002866 347 S-L-GLSL--FRP---D--FIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 347 p-L-DLs~--l~~---D--Flv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
+ + +.+. .+. | |++-|.||.+++ -+....|.||..
T Consensus 341 p~~~~~sam~~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~ 383 (714)
T PRK15400 341 PIYEGKCGMSGGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGD 383 (714)
T ss_pred cccCCcChhhcCCCCCCceEEEEchhhcccc-hhHHhHHHHcCC
Confidence 1 1 1222 234 5 999999999887 777777777654
No 291
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=97.57 E-value=0.0013 Score=74.48 Aligned_cols=155 Identities=16% Similarity=0.086 Sum_probs=89.5
Q ss_pred cEEEeCCHHHHHHHHHhhCC-C----CCC-CeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC--CC-CccCHHHHHH
Q 002866 218 GLVFTVSRGSAFKLLAESYP-F----HTN-KKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW--PT-LKLCSTDLRK 288 (872)
Q Consensus 218 ~VVFTsnATeALnLVaeslp-f----~~G-d~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~--p~-g~Id~edLe~ 288 (872)
.++|+.++++|+..++.... + ++| .+||+.....|.+...........+....+.|... +. ..-+.+++++
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 174 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEK 174 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHH
Confidence 59999999998776554321 1 123 34665543346655433322211111111111100 00 0124567776
Q ss_pred HHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeeccccC-CCC--CccCCCCCCCCcEEEE
Q 002866 289 QISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSLG-PKD--MDSLGLSLFRPDFIIT 360 (872)
Q Consensus 289 ~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~a-G~~--mipLDLs~l~~DFlv~ 360 (872)
++. .++.+|.+..+.+..|.+.| ++.+ +.|+++|+++++|-+|.+ |.. +...+.-...||++++
T Consensus 175 ~l~--------~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~ 246 (395)
T PRK03715 175 LIT--------DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTL 246 (395)
T ss_pred HcC--------CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeee
Confidence 663 24788999999999999988 7644 567999999999999862 110 1111222346999888
Q ss_pred cccccCCCCCCceEEEEEeCCCc
Q 002866 361 SFYRVFGFDPTGFGCLLIKKSVM 383 (872)
Q Consensus 361 S~HK~fG~~PtGvG~LyVRk~~i 383 (872)
+ |-+|+ -.-+|+++++++..
T Consensus 247 g--K~lg~-G~p~~av~~~~~i~ 266 (395)
T PRK03715 247 G--KGIGG-GVPLAALLAKAEVA 266 (395)
T ss_pred h--hhhhC-CcceEEEEEccccc
Confidence 6 87664 12278888877753
No 292
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=97.55 E-value=0.0027 Score=71.53 Aligned_cols=206 Identities=13% Similarity=0.136 Sum_probs=112.8
Q ss_pred CCceecccCC------CCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCG------FGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAA------tgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++..|+|.++ .+.-.+.+.+++.+ .+. .. ..+++-.......+.-++++++++. + .+.|
T Consensus 38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~-------~~~-~~---~~~~~~~~~~~~~~l~~~l~~~~~~--~--~~~~ 102 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGHCHPALVKALKE-------QGE-KL---WHISNVFTNEPALRLAKKLIDATFA--E--RVFF 102 (403)
T ss_pred CCCEEEEcCcCHHhccCCCCCHHHHHHHHH-------HHH-hc---CcccCccCCHHHHHHHHHHHhhCCC--C--EEEE
Confidence 4577899765 34456677776533 111 11 1111111112234666777777654 2 5999
Q ss_pred eCCHHHHHHHHHhhC-CCC-----CCC-eEEEecccCchhHHHHHHHH----HHcC-----cEEEEEeccCCCCccCHHH
Q 002866 222 TVSRGSAFKLLAESY-PFH-----TNK-KLLTMFDYESQSVNWMAQSA----KEKG-----AKVYSAWFKWPTLKLCSTD 285 (872)
Q Consensus 222 TsnATeALnLVaesl-pf~-----~Gd-~ILT~~DhEHnSVl~~~~~A----krkG-----aeV~~Vpvd~p~g~Id~ed 285 (872)
+.++++|+.....-. .+. .++ .|++....-|.+........ ...| ..+..+|.+ |.++
T Consensus 103 ~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~ 176 (403)
T PRK05093 103 ANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN------DLAA 176 (403)
T ss_pred eCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC------CHHH
Confidence 999999766544321 111 233 35544332355443322210 0011 123333321 5677
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDF 357 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DF 357 (872)
+++.+.. ++++|.+.-+++..|.+.| ++ ++..|+++|+++++|=++. .+.. +.........||.
T Consensus 177 l~~~l~~--------~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi 248 (403)
T PRK05093 177 VKAVIDD--------HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDI 248 (403)
T ss_pred HHHHhcC--------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCE
Confidence 7776642 4778888876666666544 44 3567899999999999965 2211 1122223456887
Q ss_pred EEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 358 IITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 358 lv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
+++ =|.+|+ | +|+++.++++++.+.
T Consensus 249 ~s~--sK~l~~---G~rig~vv~~~~i~~~l~ 275 (403)
T PRK05093 249 LTS--AKALGG---GFPIGAMLTTAEIASHFK 275 (403)
T ss_pred EEe--cccccC---CcceEEEEEcHHHHhhcC
Confidence 655 498873 6 899988887766554
No 293
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=97.52 E-value=0.0014 Score=77.29 Aligned_cols=167 Identities=13% Similarity=0.048 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.+|.+.+|+.+|++.. -..+.|+|.|++.|+.+. ..+||.||..-+ .|-|+..-+- -.|+.-+++.-..
T Consensus 70 G~i~eAqe~aA~~fgAd~t---yFvvNGTS~ank~vi~a~-~~~GD~VLvdRN-~HKSi~~gli---laGa~Pvyl~p~~ 141 (557)
T COG1982 70 GPIKEAQELAARVFGADHT---YFVVNGTSTANKAVINAV-LTPGDKVLVDRN-CHKSIHHGLI---LAGATPVYLEPSR 141 (557)
T ss_pred ccHHHHHHHHHHHhCCCce---EEEECCccHHHHHHHHhh-cCCCCEEEecCC-ccHHHHHHHH---HcCCceEEecCCC
Confidence 4567899999999999753 455688889999999887 478999888744 5777764322 2477776664322
Q ss_pred CC-----CccCHHHHHHHHhhhhccCCCCCc-eEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCC---CCc
Q 002866 277 PT-----LKLCSTDLRKQISSKKRRKKDSAA-GLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPK---DMD 346 (872)
Q Consensus 277 p~-----g~Id~edLe~~I~~~~rr~~~~~T-~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~---~mi 346 (872)
+. +.|+.+.+.+.+.+.+ .. ++.+++. ++--|+.++++ ++..++..+++|++|-++-+.. .|.
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~------~~~k~~vitn-pTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l 214 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHP------DAEKLAVITN-PTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPML 214 (557)
T ss_pred CccccccCCCCHHHHHHHHHhCh------hhheeEEEec-CccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccC
Confidence 21 4578999988876532 23 5666653 34579999998 5678899999999999964432 212
Q ss_pred cCCCC-CCCCcEEEEcccccCCCCCCceEEEEEeC
Q 002866 347 SLGLS-LFRPDFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 347 pLDLs-~l~~DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
+ +.. +.+.||++=|.||.+++ -+=.-.|.++.
T Consensus 215 ~-~~~~~~~~~~~tqS~HK~l~a-lSQaS~iHv~~ 247 (557)
T COG1982 215 P-ESALNGGADFVTQSTHKLLAA-LSQASMIHVKD 247 (557)
T ss_pred c-chhhhcCceEEEechhhhhhh-hhhhHHHhhCC
Confidence 2 222 26899999999999886 45556666665
No 294
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=97.48 E-value=0.0018 Score=73.27 Aligned_cols=206 Identities=14% Similarity=0.094 Sum_probs=117.6
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++..|||..+. +..++.+++++.+ .+ ... ..|.-++ ....+.+++|++++... + .|+|
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~-------q~-~~~---~~~~~~~--~~~~~lae~l~~~~~~~-~--~v~~ 109 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKE-------AL-ERG---TSYGAPT--EAEILLAKEIISRVPSV-E--MVRF 109 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHH-------HH-HhC---CcCCCCC--HHHHHHHHHHHHhCCcc-c--EEEE
Confidence 45789997543 3456778777543 11 111 1233233 34567899999988643 2 5999
Q ss_pred eCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHHHHcCc-----------------EEEEEeccCCCCccCH
Q 002866 222 TVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSAKEKGA-----------------KVYSAWFKWPTLKLCS 283 (872)
Q Consensus 222 TsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGa-----------------eV~~Vpvd~p~g~Id~ 283 (872)
|.++|+|+..++.. ..+...++||+....-|......... ...|. .+..+| . -+.
T Consensus 110 ~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~d~ 182 (423)
T TIGR00713 110 VNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVK-AGSGAATLGLPTSPGVPEDFAKLTLVLP--Y----NDL 182 (423)
T ss_pred eCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhcc-ccCcccccCCCCCCCCCcccccceEEeC--C----CCH
Confidence 99999988765542 12233466776433223322211110 00010 111111 1 157
Q ss_pred HHHHHHHhhhhccCCCCCceEEEE-eCccCcccchhcH----HH-HHHHHHCCcEEEeeccccCCC-C-CccCCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVF-PVQSRVTGAKYSY----QW-MALAQQNHWHVLLDAGSLGPK-D-MDSLGLSLFRP 355 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~-p~vSNvTG~i~PL----e~-I~~Are~G~~VLVDAAQ~aG~-~-mipLDLs~l~~ 355 (872)
++|++++... ..+++.|.+ |.++| +|.+.|- +. .+.|+++|+++++|=++..-. . +.........|
T Consensus 183 ~~l~~~i~~~-----~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~p 256 (423)
T TIGR00713 183 EALEEVFEEY-----GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEP 256 (423)
T ss_pred HHHHHHHHHc-----CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCc
Confidence 8888888632 134666666 56666 8999883 33 456789999999999974211 0 01111123457
Q ss_pred cEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 356 DFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
|.+ ++=|.+|. | +|+++.++++++.+.
T Consensus 257 Di~--t~sK~l~~---G~pig~v~~~~~i~~~~~ 285 (423)
T TIGR00713 257 DLT--TLGKIIGG---GLPVGAFGGRREIMERLA 285 (423)
T ss_pred chh--hhhhhhcC---CCceeeeeEHHHHHHhhC
Confidence 854 57888773 5 788888887776664
No 295
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.44 E-value=0.0031 Score=71.82 Aligned_cols=219 Identities=10% Similarity=0.050 Sum_probs=116.6
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCc-CCCchHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALY-GGAEKGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~y-gNpsS~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++.-|||..+. +--.+.+.+++.+. + ..+. +..+ +.++ ....+.-++|++++.... ..|.
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q-------~-~~~~-~~~~~~~~~--~~~~~la~~l~~~~p~~~--~~v~ 106 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQ-------L-DRLD-HVIFAGFTH--EPAERLAQRLVALTPGGL--DHVF 106 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHH-------H-hhCC-CccccccCC--HHHHHHHHHHHHhCCCCC--CEEE
Confidence 45789997544 33456777765331 1 1111 1111 1222 233455667777764222 2699
Q ss_pred EeCCHHHHHHHHHh---hC---CCCCCC-eEEEecccCchhHHHHHHHHHHc-------C--cEEEEEeccCCC-CccCH
Q 002866 221 FTVSRGSAFKLLAE---SY---PFHTNK-KLLTMFDYESQSVNWMAQSAKEK-------G--AKVYSAWFKWPT-LKLCS 283 (872)
Q Consensus 221 FTsnATeALnLVae---sl---pf~~Gd-~ILT~~DhEHnSVl~~~~~Akrk-------G--aeV~~Vpvd~p~-g~Id~ 283 (872)
|+.++|||+..... .+ .-.+|+ +||+....-|....++....... + ..+..+++..++ ...+.
T Consensus 107 f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 186 (423)
T PRK05964 107 FSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATL 186 (423)
T ss_pred EeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHH
Confidence 99999997665433 22 111333 46654332244343333211110 0 123344443211 01125
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeC-ccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPV-QSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFR 354 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~-vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~ 354 (872)
+.+++.|... ..+...|.+.- +....|.+.| ++. ...|+++|+++++|-+|. .|.. +...+.....
T Consensus 187 ~~l~~~l~~~-----~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~ 261 (423)
T PRK05964 187 DALEALLEKH-----AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVS 261 (423)
T ss_pred HHHHHHHHhC-----CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCC
Confidence 6677767532 12454555544 6777888885 443 356799999999999984 3210 1112333457
Q ss_pred CcEEEEcccccCCCCC-CceEEEEEeCCCccccc
Q 002866 355 PDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~ 387 (872)
||+++++ |++++ . ..+|+++.++++.+.+.
T Consensus 262 pDi~~~~--K~l~g-G~~p~~av~~~~~i~~~~~ 292 (423)
T PRK05964 262 PDIMCLS--KGLTG-GYLPLAATLCTAEIFEAFY 292 (423)
T ss_pred CCeeeee--hhhhc-CcccceEEEEcHHHHHhhh
Confidence 9998887 98865 3 34788888888776553
No 296
>PLN02397 aspartate transaminase
Probab=97.42 E-value=0.0016 Score=74.13 Aligned_cols=168 Identities=14% Similarity=0.100 Sum_probs=100.4
Q ss_pred HHHHHHHHHHhcCCC-CC---CCcE--EEeCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEE
Q 002866 199 EHDIKTRIMDHLNIP-EN---EYGL--VFTVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYS 271 (872)
Q Consensus 199 ieeARerIA~lLgA~-~d---EY~V--VFTsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~ 271 (872)
..+.|+.|++++.-. .. +..| +-|.+++.|..++...+. +.+||+|++.. ++.......++..|+++..
T Consensus 93 ~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~----P~y~~y~~~~~~~g~~~~~ 168 (423)
T PLN02397 93 LAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPN----PTWGNHHNIFRDAGVPVRT 168 (423)
T ss_pred CHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeC----CCchhHHHHHHHcCCeEEE
Confidence 346888888876321 10 1123 224454445443332211 24899987652 2222334456678999999
Q ss_pred Eec-cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecc-c-cCCCC
Q 002866 272 AWF-KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAG-S-LGPKD 344 (872)
Q Consensus 272 Vpv-d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAA-Q-~aG~~ 344 (872)
+|. +..+..++.+.+++.+... .+++++++++.-+|.||..++.+. +..|++++++++.|-+ . +...+
T Consensus 169 v~l~~~~~~~~d~~~l~~~l~~~-----~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~ 243 (423)
T PLN02397 169 YRYYDPKTRGLDFDGLLEDLKAA-----PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGD 243 (423)
T ss_pred eecccCcCCccCHHHHHHHHHhC-----CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCc
Confidence 987 2223467888888777531 246899999999999999999863 3567889999999987 2 22100
Q ss_pred ----CccC-CCCCCCC-cEEEEcccccCCCCCCc--eEEEE
Q 002866 345 ----MDSL-GLSLFRP-DFIITSFYRVFGFDPTG--FGCLL 377 (872)
Q Consensus 345 ----mipL-DLs~l~~-DFlv~S~HK~fG~~PtG--vG~Ly 377 (872)
..++ .+...+. =+++.|+=|.|+ +.| +|.++
T Consensus 244 ~~~~~~~~~~~~~~~~~vI~~~SfSK~~~--~~G~RvG~~v 282 (423)
T PLN02397 244 LDADAQSVRMFVEDGHEILVAQSYAKNMG--LYGERVGALS 282 (423)
T ss_pred hhhhhHHHHHHHhcCCcEEEEEECcccCC--CccccceEEE
Confidence 0010 1111111 156779999888 345 57665
No 297
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=97.35 E-value=0.0047 Score=69.73 Aligned_cols=206 Identities=12% Similarity=0.115 Sum_probs=114.1
Q ss_pred CCceecccCC------CCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCG------FGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAA------tgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|+|..+ .+.-.+.+++++.+. + ..+. ..+...+.....+.-++++++++. + .+.|
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~-------~-~~~~---~~~~~~~~~~~~~la~~L~~~~~~--~--~~~f 97 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQ-------A-DKLW---HIGNGYTNEPVLRLAKKLVDATFA--D--KVFF 97 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHH-------H-Hhcc---cccCccCCHHHHHHHHHHHhhCCC--C--EEEE
Confidence 3467888766 334556777765331 1 1110 111101123445677888888764 2 5999
Q ss_pred eCCHHHHHHHHHhhC-CC-----CCCC-eEEEecccCchhHHHHHHHHHH----c-----CcEEEEEeccCCCCccCHHH
Q 002866 222 TVSRGSAFKLLAESY-PF-----HTNK-KLLTMFDYESQSVNWMAQSAKE----K-----GAKVYSAWFKWPTLKLCSTD 285 (872)
Q Consensus 222 TsnATeALnLVaesl-pf-----~~Gd-~ILT~~DhEHnSVl~~~~~Akr----k-----GaeV~~Vpvd~p~g~Id~ed 285 (872)
++++++|+..+.... .+ .+|. +||+....-|.+.......... . ...+..+|. + +.++
T Consensus 98 ~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----d~~~ 171 (397)
T TIGR03246 98 CNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY--N----DLAA 171 (397)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC--C----CHHH
Confidence 999999876655432 11 1233 4665433335554433221110 0 012222322 1 5678
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccchh-c---HHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKY-S---YQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDF 357 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~-P---Le~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DF 357 (872)
++++|.. ++.+|.+..+.+..|.+. | ++. .+.|+++|+++++|=+|. .|.. +.....-...||.
T Consensus 172 l~~~l~~--------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi 243 (397)
T TIGR03246 172 AKALISD--------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDI 243 (397)
T ss_pred HHHHhcc--------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCE
Confidence 8877742 478888888888888765 3 443 356799999999999973 1110 0111111246887
Q ss_pred EEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 358 IITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 358 lv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
++ +=|-+|+ | +|++..++++++.+.
T Consensus 244 ~t--~~K~lgg---G~pigav~~~~~i~~~~~ 270 (397)
T TIGR03246 244 LT--SAKALGG---GFPIGAMLTTTEIAAHLK 270 (397)
T ss_pred EE--eehhhhC---CcceeEEEEcHHHHHhcc
Confidence 74 4676652 3 688887777665543
No 298
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=97.30 E-value=0.002 Score=74.47 Aligned_cols=202 Identities=12% Similarity=0.089 Sum_probs=120.7
Q ss_pred ceeccc---CCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcC-CCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCH
Q 002866 150 KVCLDY---CGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYG-GAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSR 225 (872)
Q Consensus 150 ~IYLDy---AAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg-NpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnA 225 (872)
.||.|- .+|..++..+..+++. . ...|+ .|+ +.+..++++++||-. .+++|...
T Consensus 41 dV~IDLrSDTgT~apS~~m~aAM~~-------------G-DD~Y~gdpS----v~~Lee~vael~G~E----~alpthqG 98 (467)
T TIGR02617 41 DVFIDLLTDSGTGAVTQSMQAAMMR-------------G-DEAYSGSRS----YYALAESVKNIFGYQ----YTIPTHQG 98 (467)
T ss_pred CeEEECccCCCCCCCCHHHHHHHHc-------------C-CcccccCch----HHHHHHHHHHHhCCc----eEEECCCC
Confidence 566664 3444466666665431 1 12354 343 457788899999974 28999988
Q ss_pred HHHHHHHHhhCCCCCCCeEEEecc---cCchhHHH-HHHHHHHcCcEEEEEecc--------CC-CCccCHHHHHHHHhh
Q 002866 226 GSAFKLLAESYPFHTNKKLLTMFD---YESQSVNW-MAQSAKEKGAKVYSAWFK--------WP-TLKLCSTDLRKQISS 292 (872)
Q Consensus 226 TeALnLVaeslpf~~Gd~ILT~~D---hEHnSVl~-~~~~AkrkGaeV~~Vpvd--------~p-~g~Id~edLe~~I~~ 292 (872)
+.+-+++...+.-.+|+++++... ..||.... ..-.+.-.|+.+..++.+ .+ .|.++.++|+++|..
T Consensus 99 RgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~ 178 (467)
T TIGR02617 99 RGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEE 178 (467)
T ss_pred chHHHHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhh
Confidence 999888877664335665542211 01222111 122344468887765321 22 478999999999974
Q ss_pred hhccCCCCCceEEEEeCccC-cccchhcHHHHH----HHHHCCcEEEeeccccC-----------CCCCccCCCCC----
Q 002866 293 KKRRKKDSAAGLFVFPVQSR-VTGAKYSYQWMA----LAQQNHWHVLLDAGSLG-----------PKDMDSLGLSL---- 352 (872)
Q Consensus 293 ~~rr~~~~~T~LVa~p~vSN-vTG~i~PLe~I~----~Are~G~~VLVDAAQ~a-----------G~~mipLDLs~---- 352 (872)
.. ..+...+..+..+| .-|+..|++.++ .|+++|+.+++|||=++ +. ....+.+
T Consensus 179 ~g----~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a--~~~si~eI~rE 252 (467)
T TIGR02617 179 VG----PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEY--KNWSIEQITRE 252 (467)
T ss_pred cC----CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhh--cCCCHHHHHHH
Confidence 21 01122333333334 358899998553 46899999999997322 21 1233332
Q ss_pred --CCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 353 --FRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 353 --l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
-.+|.+++|+-|-+|. |-| |+|..+++
T Consensus 253 ~~~~aDsvt~slsKglgA-pvG-g~Lag~d~ 281 (467)
T TIGR02617 253 TYKYADMLAMSAKKDAMV-PMG-GLLCFKDD 281 (467)
T ss_pred hhccCCEEEEEcCCCCCC-ccc-ceEEecch
Confidence 3689999999999998 654 34455555
No 299
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.26 E-value=0.0014 Score=74.48 Aligned_cols=173 Identities=15% Similarity=0.116 Sum_probs=117.0
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCCHHHHH----HHHHhh-CCC--CCCC-----eEEEecccCchhHHHHHHHHHHcC--
Q 002866 201 DIKTRIMDHLNIPENEYGLVFTVSRGSAF----KLLAES-YPF--HTNK-----KLLTMFDYESQSVNWMAQSAKEKG-- 266 (872)
Q Consensus 201 eARerIA~lLgA~~dEY~VVFTsnATeAL----nLVaes-lpf--~~Gd-----~ILT~~DhEHnSVl~~~~~AkrkG-- 266 (872)
++=.++-+..|-+.. -+=||++|++-+. +..-+. +|- ..|- -|+...+..|=|+.- .|.-.|
T Consensus 145 ~vl~km~~ivGw~~~-~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k---aAa~lg~g 220 (510)
T KOG0629|consen 145 EVLAKMREIVGWEEG-GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKK---AAAFLGLG 220 (510)
T ss_pred HHHHHHHHHhCCCCC-CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHH---HHHHhccC
Confidence 344444555676653 2358998887653 332222 231 1232 144444556666653 333345
Q ss_pred -cEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCC
Q 002866 267 -AKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKD 344 (872)
Q Consensus 267 -aeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~ 344 (872)
-.+..|+.+. .|.+.+++|++.|...+. ++-..-+|..++-+.+.|+.=||+ ++..|++++.++|||||-.+|.
T Consensus 221 td~c~~v~t~e-~Gkm~~~dLe~kile~k~--kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGgl- 296 (510)
T KOG0629|consen 221 TDHCIKVKTDE-RGKMIPDDLEKKILEAKA--KGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGL- 296 (510)
T ss_pred CceeEEecccc-cCccchHHHHHHHHHHHh--cCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeeccccccc-
Confidence 5677888877 689999999998876432 233357899999999999999998 5567899999999999976654
Q ss_pred CccCC----CC-CCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 345 MDSLG----LS-LFRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 345 mipLD----Ls-~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
+++.. |. --++|-++-+.||+.|+ |.-+++++.|.+-
T Consensus 297 LmS~k~R~kl~Giera~SvtwnpHK~~ga-plqCsa~l~r~~g 338 (510)
T KOG0629|consen 297 LMSRKHRHKLTGIERANSVTWNPHKLMGA-PLQCSAFLTREEG 338 (510)
T ss_pred ccChhhHhhccCccccCceeecHHHhhcC-cchhhHHHHHHHH
Confidence 12211 11 12689999999999999 8999999888864
No 300
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=97.12 E-value=0.0098 Score=67.38 Aligned_cols=206 Identities=10% Similarity=0.095 Sum_probs=110.5
Q ss_pred CCceecccCC------CCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCG------FGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAA------tgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++..|||..+ .+.-.+.+++++.+ .+. .+. ..+.........+.-++++++++. + .|.|
T Consensus 37 dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~-------~~~-~~~---~~~~~~~~~~~~~la~~l~~~~~~--~--~v~~ 101 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHAHPALREALNE-------QAS-KFW---HTGNGYTNEPVLRLAKKLIDATFA--D--RVFF 101 (406)
T ss_pred CCCEEEEcCcCHhhccCCCCCHHHHHHHHH-------HHh-hcc---cccCccCCHHHHHHHHHHHhhCCC--C--eEEE
Confidence 3467888755 33445667776533 111 110 111111123345677788888754 2 5999
Q ss_pred eCCHHHHHHHHHhhC-CC-----CC-CCeEEEecccCchhHHHHHHHHHHc----C-----cEEEEEeccCCCCccCHHH
Q 002866 222 TVSRGSAFKLLAESY-PF-----HT-NKKLLTMFDYESQSVNWMAQSAKEK----G-----AKVYSAWFKWPTLKLCSTD 285 (872)
Q Consensus 222 TsnATeALnLVaesl-pf-----~~-Gd~ILT~~DhEHnSVl~~~~~Akrk----G-----aeV~~Vpvd~p~g~Id~ed 285 (872)
+.++++|+..+.... .+ .+ ...|++....-|............. + ..+..+| . -+.++
T Consensus 102 ~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~d~~~ 175 (406)
T PRK12381 102 CNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAA--Y----NDLNS 175 (406)
T ss_pred cCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeC--C----CCHHH
Confidence 999999866654421 11 12 3456654332344433222111100 0 0122222 1 14677
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccchh-cHH----HHHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKY-SYQ----WMALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDF 357 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~-PLe----~I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DF 357 (872)
+++.|.. ++..|.+.-+...-|.+. |.+ ..+.|+++|+++++|=++. .|.. +.........||.
T Consensus 176 l~~~l~~--------~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi 247 (406)
T PRK12381 176 ASALIDD--------QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDV 247 (406)
T ss_pred HHHhccC--------CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCE
Confidence 7776742 477777777665566543 333 3456799999999999973 2221 1111222346887
Q ss_pred EEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 358 IITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 358 lv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
+ ++=|.+|+ | +|++..++++++.+.
T Consensus 248 ~--t~sK~l~g---G~~ig~~~~~~~~~~~~~ 274 (406)
T PRK12381 248 L--TTAKALGG---GFPIGAMLTTEKCASVMT 274 (406)
T ss_pred E--EehhhhhC---CCceEEEEEcHHHHhhcC
Confidence 5 45588763 4 788888877665553
No 301
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=97.05 E-value=0.011 Score=66.65 Aligned_cols=201 Identities=12% Similarity=0.047 Sum_probs=110.8
Q ss_pred CCceecccCC------CCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCG------FGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAA------tgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||..+ .+-..+.+++++.+ -..++. ..+.....+...+.-++++++++.+ .++|
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~--------ql~~~~---~~~~~~~~~~~~~la~~l~~~~~~~----~v~~ 86 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSE--------QLEKLV---VAGPMFEHEEKEEMLEELSKWVNYE----YVYM 86 (364)
T ss_pred CCCEEEEcccChhhccCCCCCHHHHHHHHH--------HHHhcC---CccCCcCCHHHHHHHHHHHhhcCCC----EEEE
Confidence 4578999754 23344667776533 111111 1111111233445566788887642 4999
Q ss_pred eCCHHHHHHHHHhhCCCCCC-CeEEEecccCchhHHHHHHH----HHHcCc-----EEEEEeccCCCCccCHHHHHHHHh
Q 002866 222 TVSRGSAFKLLAESYPFHTN-KKLLTMFDYESQSVNWMAQS----AKEKGA-----KVYSAWFKWPTLKLCSTDLRKQIS 291 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~G-d~ILT~~DhEHnSVl~~~~~----AkrkGa-----eV~~Vpvd~p~g~Id~edLe~~I~ 291 (872)
+.++|+|+...........| ++|++...--|......... ..+.+. .+..+|.. +.+.+++.+.
T Consensus 87 ~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~------d~~~l~~~i~ 160 (364)
T PRK04013 87 GNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN------DVEAAKEAIT 160 (364)
T ss_pred eCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC------CHHHHHHHhc
Confidence 99999987776553222234 56776543224433222210 011121 12222221 4566766664
Q ss_pred hhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc---CCCCCccCCCCCCCCcEEEEccc
Q 002866 292 SKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL---GPKDMDSLGLSLFRPDFIITSFY 363 (872)
Q Consensus 292 ~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~---aG~~mipLDLs~l~~DFlv~S~H 363 (872)
. ++..|.+..+....|.+.| ++.+ +.|+++|+.+++|-+|. .|+ +.....-.+.||.+++ =
T Consensus 161 ~--------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~-~~a~~~~gv~PDiv~~--g 229 (364)
T PRK04013 161 K--------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGK-FLAIEHYKVEPDIVTM--G 229 (364)
T ss_pred C--------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCc-hhHHHhcCCCCCEEEe--c
Confidence 2 4677777777777777664 4544 45799999999999987 332 1222333467998888 4
Q ss_pred ccCCCC-CCceEEEEEeCCC
Q 002866 364 RVFGFD-PTGFGCLLIKKSV 382 (872)
Q Consensus 364 K~fG~~-PtGvG~LyVRk~~ 382 (872)
|-+|+. | +|+++.+.+.
T Consensus 230 K~lggG~P--~~a~~~~~~~ 247 (364)
T PRK04013 230 KGIGNGVP--VSLTLTNFDV 247 (364)
T ss_pred ccccCCce--eEEEEecccc
Confidence 765530 2 6777777664
No 302
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=97.04 E-value=0.0066 Score=69.54 Aligned_cols=167 Identities=14% Similarity=0.091 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH----HHHHHhhCCCCCCC----eEEEecccCchhHHHHHHHHHHcCcE
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA----FKLLAESYPFHTNK----KLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeA----LnLVaeslpf~~Gd----~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
+++.+..+-+.+.-|.+. |-+.+++... =-++++.|.-..|+ .+|+. +.-|..-.. .|.--|.+
T Consensus 109 ~li~~Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP-~SAHGTNPA---SAam~G~~ 180 (496)
T COG1003 109 ELIYELQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIP-DSAHGTNPA---SAAMAGFK 180 (496)
T ss_pred HHHHHHHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEee-ccccCCChh---hHhhcCce
Confidence 677888888888888752 7788776552 22455666433333 23443 323332221 23446999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccch-hcHH-HHHHHHHCCcEEEeecc---ccCCC
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAK-YSYQ-WMALAQQNHWHVLLDAG---SLGPK 343 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i-~PLe-~I~~Are~G~~VLVDAA---Q~aG~ 343 (872)
|+.|+.+. +|.||.++|++++.. ++.-+-++.- |..|.- ..|. ++++.|++|..|-.|+| +.+|.
T Consensus 181 VV~V~~~~-~G~VDlddLk~k~~~--------~~AalMiTnP-sT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~ 250 (496)
T COG1003 181 VVVVKCDE-NGNVDLDDLRAKAED--------NLAALMITNP-STLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGL 250 (496)
T ss_pred EEEEecCC-CCCccHHHHHHHhcc--------ceeEEEeccC-cccccchhhHHHHHHHHHHcCCEEEecCcchhhhhcc
Confidence 99999987 689999999988863 2443434332 345643 3455 45567999999999999 44664
Q ss_pred CCccCCCCCCCCcEEEEcccccCCCCCC-----ceEEEEEeCCCcccc
Q 002866 344 DMDSLGLSLFRPDFIITSFYRVFGFDPT-----GFGCLLIKKSVMGSL 386 (872)
Q Consensus 344 ~mipLDLs~l~~DFlv~S~HK~fG~~Pt-----GvG~LyVRk~~i~~L 386 (872)
.---+++.|.+=++.||.|+. |- |.|=.-||..+.+.|
T Consensus 251 ----~rPGd~G~DV~HlNLHKTF~i-PHGGGGPG~GPvgVk~~L~pfL 293 (496)
T COG1003 251 ----ARPGDMGFDVVHLNLHKTFCI-PHGGGGPGAGPVGVKAHLAPFL 293 (496)
T ss_pred ----ccccccccceEEeeccccccc-CCCCCCCCCCceehHhhccccC
Confidence 223457999999999998765 43 444555555444433
No 303
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=97.04 E-value=0.0038 Score=70.88 Aligned_cols=131 Identities=13% Similarity=0.128 Sum_probs=94.5
Q ss_pred HHHHHHHHhcC--------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 201 DIKTRIMDHLN--------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 201 eARerIA~lLg--------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
.-|+++|+|+. .+|+ .||.|.|+|.|+++++-.+. .+|+.+|+++-|- +.. -+...=+.|++++.+
T Consensus 125 ~frqa~A~Fm~~~r~~~v~fdP~--~~Vv~~G~T~ane~l~fcLa-dpgdafLvPtPyY-~gf--drdl~~rTgveivpv 198 (471)
T KOG0256|consen 125 SFRQAVAEFMERARGNRVKFDPE--RVVVTNGATSANETLMFCLA-DPGDAFLVPTPYY-PGF--DRDLRWRTGVEIVPV 198 (471)
T ss_pred HHHHHHHHHHHHHhCCCCccCcc--ceEEecccchhhHHHHHHhc-CCCceeeecCCCC-Ccc--cccceeccCceEEEE
Confidence 46666776654 2454 69999999999999998875 5899887665432 222 122233469999888
Q ss_pred eccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-H---HHHHHCCcEEEeeccc
Q 002866 273 WFKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-M---ALAQQNHWHVLLDAGS 339 (872)
Q Consensus 273 pvd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I---~~Are~G~~VLVDAAQ 339 (872)
..+.. +.+|+.+.|+.++.+.+ +.+.+.+=+.++--+|..|+.++=+. + .-|.++++||++|=.=
T Consensus 199 ~c~Ss~~f~itv~alE~A~~~A~--~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIy 268 (471)
T KOG0256|consen 199 HCSSSNGFQITVEALEAALNQAR--KLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIY 268 (471)
T ss_pred EeecCCCccccHHHHHHHHHHHH--HhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhh
Confidence 76543 45889999999887543 23446777778888999999999863 2 4467899999999873
No 304
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=97.01 E-value=0.032 Score=63.71 Aligned_cols=219 Identities=11% Similarity=0.081 Sum_probs=112.2
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCC-CCcEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPEN-EYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~d-EY~VV 220 (872)
++.-|||..+. +--.+.+++++.+. +.. +. ..+......+...+.=+++++++..+.. .+.++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q-------l~~-~~--~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~ 102 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDY-------LAD-DG--IIHSLDMATEAKREFLETFNEIILKPRGLDYKVQ 102 (412)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHH-------Hhh-cc--ceeccccCcHHHHHHHHHHHHhccCccCCCceEE
Confidence 45789997544 44567777775431 111 10 0011010112223344455555422211 12477
Q ss_pred Ee-CCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHH----HHcC-----cEEEEEeccCCCC--ccCHHHHH
Q 002866 221 FT-VSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSA----KEKG-----AKVYSAWFKWPTL--KLCSTDLR 287 (872)
Q Consensus 221 FT-snATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~A----krkG-----aeV~~Vpvd~p~g--~Id~edLe 287 (872)
|+ .+++||+.....- ..+....+||+....-|....+..... .+.+ ..+..+|...... .-+.+.++
T Consensus 103 f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 182 (412)
T TIGR02407 103 FPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFE 182 (412)
T ss_pred EeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHH
Confidence 85 7899976654432 222223456654432344443322211 1111 1233444321000 01245566
Q ss_pred HHHhhhhccCCCCCceEEEEeCccCcccchh-cHHH----HHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEE
Q 002866 288 KQISSKKRRKKDSAAGLFVFPVQSRVTGAKY-SYQW----MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFII 359 (872)
Q Consensus 288 ~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~-PLe~----I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv 359 (872)
+++.... ....++..|.+.-+.+..|.+. |-.. .+.|+++|+++++|-+|. .|.. +...+...+.||+++
T Consensus 183 ~~~~~~~--~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~ 260 (412)
T TIGR02407 183 KLLEDSS--SGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVC 260 (412)
T ss_pred HHHHhcc--CCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEE
Confidence 6665321 0112456777777778889854 4332 346789999999999985 2210 123344556899998
Q ss_pred EcccccCCCCCCc--eEEEEEeCCC
Q 002866 360 TSFYRVFGFDPTG--FGCLLIKKSV 382 (872)
Q Consensus 360 ~S~HK~fG~~PtG--vG~LyVRk~~ 382 (872)
++ |++| +.| +|+++++++.
T Consensus 261 ~~--K~lg--~~G~pigav~~~~~~ 281 (412)
T TIGR02407 261 LS--KSIS--GYGLPLALTLIKPEL 281 (412)
T ss_pred ec--hhcc--CCccceeEEEEchhh
Confidence 87 9987 445 8999998764
No 305
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=96.93 E-value=0.0052 Score=69.26 Aligned_cols=167 Identities=15% Similarity=0.140 Sum_probs=95.2
Q ss_pred HHHHHHHhcCCCCCCCcEEEe--CCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHH-------HHHHHcCcEEEEE
Q 002866 202 IKTRIMDHLNIPENEYGLVFT--VSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMA-------QSAKEKGAKVYSA 272 (872)
Q Consensus 202 ARerIA~lLgA~~dEY~VVFT--snATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~-------~~AkrkGaeV~~V 272 (872)
.-+-.|+.||+.. .+|=. -++|+|+.+...++ +++||+++...--+...+...+ -.++..|++...+
T Consensus 59 le~iyA~vfgaE~---ALVRpq~vSGTHAi~~~Lfg~-LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v 134 (403)
T PF06838_consen 59 LERIYADVFGAED---ALVRPQFVSGTHAIALALFGV-LRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREV 134 (403)
T ss_dssp HHHHHHHHCT-SE---EEEETTS-SHHHHHHHHHHHH---TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE-
T ss_pred HHHHHHHHhCchh---hhhcccccchHHHHHHHHHhc-CCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEE
Confidence 3344688899843 34422 47899999999887 4799998854322222333322 1235679999999
Q ss_pred eccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCcc----CcccchhcHH-HHHHHH--HCCcEEEeecc--ccCCC
Q 002866 273 WFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQS----RVTGAKYSYQ-WMALAQ--QNHWHVLLDAG--SLGPK 343 (872)
Q Consensus 273 pvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vS----NvTG~i~PLe-~I~~Ar--e~G~~VLVDAA--Q~aG~ 343 (872)
++.. ++.+|.+.++++|+. +|++|.+.--. +.+=++-.|+ .|+.+| .-++.++||=| -++-+
T Consensus 135 ~L~~-dg~~D~~~i~~~~~~--------~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~ 205 (403)
T PF06838_consen 135 PLTE-DGTIDWEAIKKALKP--------NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET 205 (403)
T ss_dssp -B-T-TSSB-HHHHHHHHHT--------TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS
T ss_pred eecC-CCCcCHHHHHHhhcc--------CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc
Confidence 9976 689999999999973 58999986432 1111222232 234444 46899999998 34432
Q ss_pred CCccCCCCCCCCcEEEEcccccCCCC--CCceEEEEEeCCCcccc
Q 002866 344 DMDSLGLSLFRPDFIITSFYRVFGFD--PTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 344 ~mipLDLs~l~~DFlv~S~HK~fG~~--PtGvG~LyVRk~~i~~L 386 (872)
..-.+.++|.++.|.-|-.|+. |+| |.+.-|+++.+..
T Consensus 206 ----~EP~~vGADl~aGSLIKNpGGgiAptG-GYIaGr~~lVe~~ 245 (403)
T PF06838_consen 206 ----QEPTEVGADLMAGSLIKNPGGGIAPTG-GYIAGRKDLVERA 245 (403)
T ss_dssp ----S-GGGGT-SEEEEETTSGGGTTT-SS--EEEEESHHHHHHH
T ss_pred ----cCccccchhheeccceeCCCCCccCcC-CEEechHHHHHHH
Confidence 2233469999999999975531 443 6666677776443
No 306
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=96.93 E-value=0.013 Score=67.05 Aligned_cols=210 Identities=11% Similarity=0.091 Sum_probs=117.1
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||..+. +..++.+++++.+ .+ ... ..++.++ ....+.++++++++. ..+ .|.|
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~-------~~-~~~---~~~~~~~--~~~~~la~~L~~~~~-~~~--~v~~ 111 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIE-------AA-EKG---LSFGAPT--ELEVELAELVIELVP-SIE--MVRM 111 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHH-------HH-HhC---CcCCCCC--HHHHHHHHHHHHhCC-CCC--EEEE
Confidence 45678887653 2455677776533 11 111 1122222 334567778877763 123 5999
Q ss_pred eCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHHH------H----cCcEE----EEEeccCCCCccCHHHH
Q 002866 222 TVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSAK------E----KGAKV----YSAWFKWPTLKLCSTDL 286 (872)
Q Consensus 222 TsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~Ak------r----kGaeV----~~Vpvd~p~g~Id~edL 286 (872)
|.++++|+..++.. ..+..+++||+...--|........... . .+... ....+.. -+.+++
T Consensus 112 ~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~l 187 (426)
T PRK00062 112 VNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPY----NDLEAV 187 (426)
T ss_pred ecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCC----CCHHHH
Confidence 99999998876664 2233345666543323443322211100 0 01100 0112211 256788
Q ss_pred HHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeeccccCCC-C-CccCCCCCCCCcEEE
Q 002866 287 RKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSLGPK-D-MDSLGLSLFRPDFII 359 (872)
Q Consensus 287 e~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~aG~-~-mipLDLs~l~~DFlv 359 (872)
++.+... ..++..|.+..+...+|.+.| ++. .+.|+++|+++++|=++.+-. . +...+.-...||++
T Consensus 188 ~~~i~~~-----~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi~- 261 (426)
T PRK00062 188 EELFEEY-----GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDLT- 261 (426)
T ss_pred HHHHHhC-----CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcchH-
Confidence 8777532 135778888777777999998 653 467899999999999976221 0 01111122357865
Q ss_pred EcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 360 TSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 360 ~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
++-|.+|. | +|++..++++++.+.
T Consensus 262 -~~gK~l~~---G~p~ga~~~~~~i~~~~~ 287 (426)
T PRK00062 262 -TLGKIIGG---GLPVGAFGGRREIMEQLA 287 (426)
T ss_pred -hhhhHhhC---CCcceeeeEHHHHHHhhc
Confidence 45687763 3 678877777766654
No 307
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=96.72 E-value=0.048 Score=62.47 Aligned_cols=173 Identities=13% Similarity=0.102 Sum_probs=92.3
Q ss_pred HHHHHHHHhcCCCC-CCCcEEEe-CCHHHHHHHHHh---hCCCCCCCeEEEecccCchhHHHHHHHH----HHc--Cc--
Q 002866 201 DIKTRIMDHLNIPE-NEYGLVFT-VSRGSAFKLLAE---SYPFHTNKKLLTMFDYESQSVNWMAQSA----KEK--GA-- 267 (872)
Q Consensus 201 eARerIA~lLgA~~-dEY~VVFT-snATeALnLVae---slpf~~Gd~ILT~~DhEHnSVl~~~~~A----krk--Ga-- 267 (872)
+.=+++++.+..+. -++.+.|+ .++|||+..... .+ ....+||+...--|....+..... .+. |.
T Consensus 86 ~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~ 163 (425)
T PRK09264 86 EFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKV--TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPL 163 (425)
T ss_pred HHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHh--cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCC
Confidence 33345555543321 11247785 799997665433 33 223456654332244332222110 111 11
Q ss_pred -EEEEEeccCCC-Cc-cCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeeccc
Q 002866 268 -KVYSAWFKWPT-LK-LCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGS 339 (872)
Q Consensus 268 -eV~~Vpvd~p~-g~-Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ 339 (872)
.+..+|..... .. -+.++++++|.... ....++..|.+--+....|.+.| ++ +.+.|+++|+++++|-+|
T Consensus 164 ~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 241 (425)
T PRK09264 164 NNVTRMPYDGYFGGDVDTLAYLEKLLEDSS--SGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQ 241 (425)
T ss_pred CCeEEeCCCCccccchhHHHHHHHHHHhcc--CCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechh
Confidence 24455543110 00 14566777775321 01124567777767777887664 34 345789999999999998
Q ss_pred c-CC---CCCccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCC
Q 002866 340 L-GP---KDMDSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSV 382 (872)
Q Consensus 340 ~-aG---~~mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~ 382 (872)
. .| + +...+...+.||+++++ |.+| +.| +|+++++++.
T Consensus 242 tG~GrtG~-~~~~~~~~v~PDi~t~~--K~l~--~~G~pigav~~~~~i 285 (425)
T PRK09264 242 AGCGRTGT-FFSFERAGITPDIVTLS--KSIS--GYGLPMALVLIKPEL 285 (425)
T ss_pred hCCccccH-HHHHhhcCCCCCEEEec--cccC--CCccceEEEEEchhh
Confidence 4 22 1 12233344689998887 9877 345 4888887664
No 308
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=96.58 E-value=0.019 Score=66.43 Aligned_cols=162 Identities=11% Similarity=0.103 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH---HHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEE
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS---AFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYS 271 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATe---ALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~ 271 (872)
.+.+.+-..-|+++.|.+-.. .-.-.++|. |+.+..+... +++++++++.. -|+... -+..+++-.|++|..
T Consensus 109 Lq~lfe~Qs~i~eLTGmdvaN--aSlyd~atA~aEa~~ma~r~~~-~~~~~vlv~~~-~hP~~~~v~~t~a~~~g~~iv~ 184 (429)
T PF02347_consen 109 LQALFEYQSMICELTGMDVAN--ASLYDGATAAAEAMLMAVRATK-RKRNKVLVPES-LHPQTRAVLRTYAAPLGIEIVE 184 (429)
T ss_dssp HHHHHHHHHHHHHHHTSSEE---SEBSSCCHHHHHHHHHHHHHHT-T---EEEEETT-S-CHHHHHHHHHCCHCCEEEEE
T ss_pred HHHHHHHHHHHHHhhCCCccC--CCCCChhHHHHHHHHHHHHhcc-cCCcEEEEcCC-cChhhHHHHHHhhhhCCeEEEE
Confidence 367888999999999986321 123356665 4444333322 22346766543 233333 345567778999999
Q ss_pred EeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeecc---ccCCCCCcc
Q 002866 272 AWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAG---SLGPKDMDS 347 (872)
Q Consensus 272 Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAA---Q~aG~~mip 347 (872)
++.+.. +..+ . .++.-|.++.- |..|.+-+++. .+.+|++|.++++ ++ ++++.
T Consensus 185 ~~~~~~-~~~d--------~--------~~~a~v~vq~P-n~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l---- 241 (429)
T PF02347_consen 185 VPLDED-GTTD--------D--------DDTAAVMVQNP-NTFGVFEDIKEIADIAHAAGALVIV-GADPNALGGL---- 241 (429)
T ss_dssp E-BBTT-CSB---------S--------TTEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC----
T ss_pred eccccc-CCcc--------c--------cCeEEEEeecC-CCCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCc----
Confidence 998753 3333 1 24666666544 68999999974 5678999999877 55 33332
Q ss_pred CCCCCCCCcEEEEccccc------CCCCCCceEEEEEeCCCccccc
Q 002866 348 LGLSLFRPDFIITSFYRV------FGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~------fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
-.-.++++|.++.+ ||- ||+ | |.|++-+|+.....|.
T Consensus 242 ~~Pge~GADI~vg~-~Q~fg~p~~~GG-P-~~G~~a~~~~l~r~lP 284 (429)
T PF02347_consen 242 KSPGEYGADIVVGE-HQTFGIPMGFGG-P-GAGFFAVREDLVRQLP 284 (429)
T ss_dssp --GGGGT-SEEEEC-CTTTT---CCC--S---EEEEE-GGGGGGS-
T ss_pred CChhhcCccEEeeC-CCCCcccCCCCC-C-CeeeEEEhhhhhhhCC
Confidence 22356899999666 775 445 3 7889999999776664
No 309
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=96.57 E-value=0.017 Score=65.71 Aligned_cols=146 Identities=15% Similarity=0.193 Sum_probs=95.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCCHHH---HHHHHHhhCCCCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccC
Q 002866 201 DIKTRIMDHLNIPENEYGLVFTVSRGS---AFKLLAESYPFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 201 eARerIA~lLgA~~dEY~VVFTsnATe---ALnLVaeslpf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~ 276 (872)
+.-+.+|++-.-+. .++|++.--. -+-+++.-+| |=+|++. +-.|.|+ .+++ ..|+.=.+ |..
T Consensus 220 ~LE~eLA~LHqK~a---ALlFsSCfVANDstLftLak~lp---gcei~SD-~gNHASMI~GIr----ns~v~K~I--FrH 286 (570)
T KOG1360|consen 220 RLEAELADLHQKEA---ALLFSSCFVANDSTLFTLAKKLP---GCEIFSD-EGNHASMIQGIR----NSRVPKHI--FRH 286 (570)
T ss_pred hHHHHHHHHhcCcc---eeeeeeeeeccchHHHHHHHHCC---CcEEecc-ccchHHHHHHhh----hcCCccee--ecc
Confidence 45556777755433 4888865432 2556676665 4455544 4456544 3443 33433222 333
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc--CCCC--
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS--LGLS-- 351 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip--LDLs-- 351 (872)
+ |+++|+++|.... ....++|+|-.+..++|.+-||+ ++..||++|+..+||-++++|.= -+ -.+.
T Consensus 287 N----D~~hL~~lL~~~~----~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlY-G~rGaGvger 357 (570)
T KOG1360|consen 287 N----DLDHLEQLLQSSP----KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLY-GPRGAGVGER 357 (570)
T ss_pred C----CHHHHHHHHHhCC----CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccc-cCCCCCcccc
Confidence 2 6789999887542 23579999999999999999998 56788999999999999887630 00 1111
Q ss_pred ---CCCCcEEEEcccccCCC
Q 002866 352 ---LFRPDFIITSFYRVFGF 368 (872)
Q Consensus 352 ---~l~~DFlv~S~HK~fG~ 368 (872)
...+|.++...-|-||-
T Consensus 358 dGvm~kvDiIsGTLgKafGc 377 (570)
T KOG1360|consen 358 DGVMHKVDIISGTLGKAFGC 377 (570)
T ss_pred CCcchhhhhcccchhhhccc
Confidence 13578888888888873
No 310
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=96.48 E-value=0.018 Score=65.93 Aligned_cols=135 Identities=16% Similarity=0.207 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHhcCCCC-CCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPE-NEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~-dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
+++..++.-.--.+++++ .+++|+.|.|.|.|+..+.+-+- ..|+.|++. +| +....++..+..|+++..|+.+
T Consensus 104 eLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~-N~gd~vlie-~~---ty~~AL~s~~a~gv~~ipv~md 178 (472)
T KOG0634|consen 104 ELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI-NRGDHVLIE-EY---TYPSALQSMEALGVKIIPVKMD 178 (472)
T ss_pred HHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh-cCCCceEEe-cc---cchHHHHhccccCceEEecccc
Confidence 444555553333445543 45689999999999999888763 678888875 22 2334455667789777777766
Q ss_pred CCCCccCHHHHHHHHhhhhcc-CCCC-CceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecc
Q 002866 276 WPTLKLCSTDLRKQISSKKRR-KKDS-AAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAG 338 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr-~~~~-~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAA 338 (872)
.+ -++++.|++.+...+-. .+.+ ..-|.++|.-.|.||.-++++ ++.+||+++++++-|-.
T Consensus 179 ~~--Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp 245 (472)
T KOG0634|consen 179 QD--GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP 245 (472)
T ss_pred CC--CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence 53 47899999988753211 1112 456999999999999999996 46789999999988754
No 311
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=96.37 E-value=0.0018 Score=73.43 Aligned_cols=152 Identities=7% Similarity=-0.014 Sum_probs=98.3
Q ss_pred HHHHHHhcCCCCCCCcEEEeCCHHH-HHHHHHhhCCCCC-CCeEE-EecccCchhHHHHHHHHHHcCcEEEEEec--cCC
Q 002866 203 KTRIMDHLNIPENEYGLVFTVSRGS-AFKLLAESYPFHT-NKKLL-TMFDYESQSVNWMAQSAKEKGAKVYSAWF--KWP 277 (872)
Q Consensus 203 RerIA~lLgA~~dEY~VVFTsnATe-ALnLVaeslpf~~-Gd~IL-T~~DhEHnSVl~~~~~AkrkGaeV~~Vpv--d~p 277 (872)
=.-+.+.+|+..- ...+.++-||. ++.+...++.-++ ++.|+ ...||. .+.. .+...|.++..||. ..+
T Consensus 62 ~~d~~~~~G~~~~-~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqk-Sc~k----ai~~AGl~~~vV~~~~~~d 135 (389)
T PF05889_consen 62 VLDALRLAGLRSV-KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQK-SCFK----AIERAGLEPVVVENVLEGD 135 (389)
T ss_dssp HHHHHHHTTHTTH-CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETH-HHHH----HHHHTT-EEEEE-EEEETT
T ss_pred HHHHHHHcCCccc-cceEEEecccccHHHHHHHHHhcccCCceEEEeecccc-chHH----HHHhcCCeEEEeeccCCCC
Confidence 3345667888643 24666788876 4555555543123 44444 344543 3333 34556999988874 222
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc-HHHH-HHHHHCCcEEEeeccccC--------------
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS-YQWM-ALAQQNHWHVLLDAGSLG-------------- 341 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P-Le~I-~~Are~G~~VLVDAAQ~a-------------- 341 (872)
....+.+.+++.|... +....|.++++.+-+.|...| ++.| ++|+++|+..+|-.|=.+
T Consensus 136 ~l~td~~~ie~~i~~~-----G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~ 210 (389)
T PF05889_consen 136 ELITDLEAIEAKIEEL-----GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWR 210 (389)
T ss_dssp EEEEHHHHHHHHHHHH-----CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHH
T ss_pred eeeccHHHHHHHHHHh-----CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHh
Confidence 3445677788888543 235689999999999999999 8754 678999999999999777
Q ss_pred -CCCCccCCCCCCCCcEEEEcccccCC
Q 002866 342 -PKDMDSLGLSLFRPDFIITSFYRVFG 367 (872)
Q Consensus 342 -G~~mipLDLs~l~~DFlv~S~HK~fG 367 (872)
|. ++++++.++.||++-++||+..
T Consensus 211 ~GR--vda~vqS~dkNF~VPvGgai~A 235 (389)
T PF05889_consen 211 VGR--VDAFVQSTDKNFMVPVGGAIMA 235 (389)
T ss_dssp HST--CSEEEEEHHHHHCEESSHEEEE
T ss_pred cCC--cceeeeecCCCEEecCCCcEEE
Confidence 86 7889999999999999999643
No 312
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=96.33 E-value=0.12 Score=60.07 Aligned_cols=213 Identities=12% Similarity=0.038 Sum_probs=114.5
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||..+. +-..+.+++++.+. + ..+.....+ .+ .....+.-+++++++.... ..|.|
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~q-------l-~~l~~~~~~-~~--~~~~~~lAe~L~~~~p~~~--~~v~f 139 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQ-------L-AKQPLHSQE-LL--DPLRALLAKTLAALTPGKL--KYSFF 139 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHH-------H-HhCCCcccc-cC--CHHHHHHHHHHHHhCCCCc--CEEEE
Confidence 45789996544 33557777775431 1 111100111 11 1233455566666664322 25899
Q ss_pred eCCHHHHHHHHHh---hCCCCCCC-eEEEecccCchhHHHHHHHHH----HcC-----cEEEEEeccCCCCccCHHHHHH
Q 002866 222 TVSRGSAFKLLAE---SYPFHTNK-KLLTMFDYESQSVNWMAQSAK----EKG-----AKVYSAWFKWPTLKLCSTDLRK 288 (872)
Q Consensus 222 TsnATeALnLVae---slpf~~Gd-~ILT~~DhEHnSVl~~~~~Ak----rkG-----aeV~~Vpvd~p~g~Id~edLe~ 288 (872)
+.++|||+..... .+.-..|. .|++...--|....+...... +.+ ..+..+|+. +.+.+++
T Consensus 140 ~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~------d~~~~~~ 213 (442)
T TIGR03372 140 CNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG------DIEAMLK 213 (442)
T ss_pred eCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC------CHHHHHH
Confidence 9999998665433 33111343 465543322443332221100 011 112333332 3466666
Q ss_pred HHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEE
Q 002866 289 QISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIIT 360 (872)
Q Consensus 289 ~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~ 360 (872)
.|....+ ...+...|.+.-+...-|.+.| ++. .+.|+++|+.+++|=+|. .|.. +.-.......||+++
T Consensus 214 ~l~~~~~--~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt- 290 (442)
T TIGR03372 214 ALNECKK--TGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILC- 290 (442)
T ss_pred HHHHHhc--CCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeee-
Confidence 6643111 1234677777777777899998 664 456799999999999985 3320 001112234699877
Q ss_pred cccccCCCCCCc---eEEEEEeCCCcccc
Q 002866 361 SFYRVFGFDPTG---FGCLLIKKSVMGSL 386 (872)
Q Consensus 361 S~HK~fG~~PtG---vG~LyVRk~~i~~L 386 (872)
+=|-+|. | +|+++.++++.+.+
T Consensus 291 -~gK~lg~---G~~Pigavv~~~~i~~~~ 315 (442)
T TIGR03372 291 -LAKALGG---GVMPIGATIATEAVFSVL 315 (442)
T ss_pred -ehhhhcC---CcccceEEEecHHHHHhh
Confidence 5687663 4 78888888876655
No 313
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=96.26 E-value=0.25 Score=57.22 Aligned_cols=177 Identities=11% Similarity=0.070 Sum_probs=94.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHH-----HHc--C--cEEE
Q 002866 201 DIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSA-----KEK--G--AKVY 270 (872)
Q Consensus 201 eARerIA~lLgA~~dEY~VVFTsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~A-----krk--G--aeV~ 270 (872)
+.=+++++++...-+ .|.|+.++|||+.....- ..+.....|++...--|.......... .+. | ..+.
T Consensus 88 ~la~~L~~~~p~~~~--~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~ 165 (443)
T PRK08360 88 LLAEKLIEIAPGDNP--KVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVH 165 (443)
T ss_pred HHHHHHHHhCCCCCC--EEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcE
Confidence 333456666654322 599999999986654331 112223346654332244322211110 000 1 1234
Q ss_pred EEeccCCC-Cc----------cCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEE
Q 002866 271 SAWFKWPT-LK----------LCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVL 334 (872)
Q Consensus 271 ~Vpvd~p~-g~----------Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VL 334 (872)
++|..... .. -+.+.+++.|... ....++..|.+.-+.|.+|.+.| ++. .+.|+++|++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 242 (443)
T PRK08360 166 YIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGE---VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLV 242 (443)
T ss_pred EEeCCccccccccCchhhhHHHHHHHHHHHHHhc---cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 44432110 00 0123344445321 01235777777778889999988 333 456789999999
Q ss_pred eecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 335 LDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 335 VDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
+|=++. .|.. +.....-.+.+|++++ =|-+|. | +|++..++++++.+.
T Consensus 243 ~DEv~~g~gr~G~~~a~~~~~~~pDiitl--sK~l~~---G~pigav~~~~~i~~~~~ 295 (443)
T PRK08360 243 VDEVQSGLGRTGKWFAIEHFGVEPDIITL--GKPLGG---GLPISATIGRAEIMDSLP 295 (443)
T ss_pred EeccccCCCcCccchhhhhcCCCCCEEEe--cccccC---CceeEEEEEcHHHHhhhc
Confidence 999975 3321 1111222356897755 788773 4 899998888776664
No 314
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=96.21 E-value=0.13 Score=60.06 Aligned_cols=213 Identities=12% Similarity=0.056 Sum_probs=113.7
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||..+. +-..+.+++++.+. + ..+. .+..........+.-+++++++....+ .|.|
T Consensus 80 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q-------l-~~l~---~~~~~~~~~~~~~lae~L~~~~p~~~~--~v~f 146 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQ-------L-AKQP---LHSQELLDPLRAMLAKTLAALTPGKLK--YSFF 146 (459)
T ss_pred CCCEEEECCcCHHhhhcCCCCHHHHHHHHHH-------H-hhCc---ccccccCCHHHHHHHHHHHHhCCCCCC--EEEE
Confidence 34789997544 33456777775431 1 1111 111111112334555666776543222 5999
Q ss_pred eCCHHHHHHHHHh---hCCCCCCC-eEEEecccCchhHHHHHHHHHHcCc---------EEEEEeccCCCCccCHHHHHH
Q 002866 222 TVSRGSAFKLLAE---SYPFHTNK-KLLTMFDYESQSVNWMAQSAKEKGA---------KVYSAWFKWPTLKLCSTDLRK 288 (872)
Q Consensus 222 TsnATeALnLVae---slpf~~Gd-~ILT~~DhEHnSVl~~~~~AkrkGa---------eV~~Vpvd~p~g~Id~edLe~ 288 (872)
+.++|||+..... .+.-++|+ .||+...--|....+.......... .+..+|. + +.+++++
T Consensus 147 ~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~--~----d~~~l~~ 220 (459)
T PRK11522 147 CNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF--G----NIEAMRT 220 (459)
T ss_pred eCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC--C----CHHHHHH
Confidence 9999998665433 33222333 4555432223332222111000000 0112221 1 4577777
Q ss_pred HHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEE
Q 002866 289 QISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIIT 360 (872)
Q Consensus 289 ~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~ 360 (872)
+|....+ ...+...|.+-.+....|.+.| ++.+ +.|+++|+++++|=+|. .|.. +.-.......||.+++
T Consensus 221 ~l~~~~~--~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~ 298 (459)
T PRK11522 221 ALSECKK--TGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCL 298 (459)
T ss_pred HHHHhhc--cCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEe
Confidence 7753211 1234667777777778899998 6644 56799999999999985 2210 0011222346898754
Q ss_pred cccccCCCCCCc---eEEEEEeCCCcccc
Q 002866 361 SFYRVFGFDPTG---FGCLLIKKSVMGSL 386 (872)
Q Consensus 361 S~HK~fG~~PtG---vG~LyVRk~~i~~L 386 (872)
=|-+|+ | +|+++++++..+.+
T Consensus 299 --gK~lgg---G~~Pigav~~~~~i~~~~ 322 (459)
T PRK11522 299 --AKALGG---GVMPIGATIATEEVFSVL 322 (459)
T ss_pred --chhhhC---CCccceeEEEcHHHHHHh
Confidence 687774 4 79999988766544
No 315
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=96.17 E-value=0.22 Score=57.69 Aligned_cols=81 Identities=12% Similarity=0.089 Sum_probs=56.1
Q ss_pred CceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCc
Q 002866 301 AAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTG 372 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtG 372 (872)
+...|.+-.+....|.+.| ++.+ +.|+++|+.+++|=+|. .|.. +.....-.+.||.++++ |.+|+ -..
T Consensus 221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~--K~l~~-G~p 297 (441)
T PRK05769 221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLA--KAIAG-GLP 297 (441)
T ss_pred ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEc--ccccC-Ccc
Confidence 5778888888888999999 7644 56799999999999976 3321 00111112468999876 87664 123
Q ss_pred eEEEEEeCCCcc
Q 002866 373 FGCLLIKKSVMG 384 (872)
Q Consensus 373 vG~LyVRk~~i~ 384 (872)
+|+++.++++..
T Consensus 298 ~gav~~~~~i~~ 309 (441)
T PRK05769 298 LGAVIGRAELMF 309 (441)
T ss_pred cEEEEEehhhhh
Confidence 888888888764
No 316
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=96.16 E-value=0.11 Score=59.74 Aligned_cols=166 Identities=15% Similarity=0.130 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCC--CCeEEEecccCchh-HHHHHHHHHHcCcEEEEEe
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHT--NKKLLTMFDYESQS-VNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~--Gd~ILT~~DhEHnS-Vl~~~~~AkrkGaeV~~Vp 273 (872)
+.+-+=..-|+++.|.+-.. --.--.+|.+-.-+.-++...+ .+++++.-+ -|+. +.-++.+|+-.|++|...+
T Consensus 120 qaLfefQtlv~dLTGm~VAN--ASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~-vhpqt~~Vl~Tra~~~g~~i~~~~ 196 (450)
T COG0403 120 EALFEFQTLVADLTGLDVAN--ASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKD-VHPQTLDVLRTRAEGLGIEIEVVD 196 (450)
T ss_pred HHHHHHHHHHHHHhCCCccc--chhhhhHHHHHHHHHHHHHhhcCcCceEEecCC-CCHHHHHHHHhhcccCceEEEEec
Confidence 56667788999999986432 1222455655444333333333 355666643 3444 3445677777788888766
Q ss_pred ccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCccc-chhcHH-HHHHHHHCCcEEEe--eccccCCCCCccCC
Q 002866 274 FKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTG-AKYSYQ-WMALAQQNHWHVLL--DAGSLGPKDMDSLG 349 (872)
Q Consensus 274 vd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG-~i~PLe-~I~~Are~G~~VLV--DAAQ~aG~~mipLD 349 (872)
.+ +.++|++. .. ..+--+.+.+- |..| ...++. ++..+|++|++|+| |-.++.=. -.
T Consensus 197 ~~------d~~~l~~~-~~-------~~~~gv~vQyP-~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL----~p 257 (450)
T COG0403 197 AD------DLDDLESA-DD-------GDVFGVLVQYP-NTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLL----KP 257 (450)
T ss_pred cc------hhhhhhhc-cc-------cCeEEEEEecC-CCCCccchhHHHHHHHHhhcCCEEEEEechhHhhcc----CC
Confidence 43 34555544 21 23444444433 5788 666697 56788999998776 33333211 11
Q ss_pred CCCCCCcEEEEccccc-----CCCCCCceEEEEEeCCCcccc
Q 002866 350 LSLFRPDFIITSFYRV-----FGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 350 Ls~l~~DFlv~S~HK~-----fG~~PtGvG~LyVRk~~i~~L 386 (872)
--++++|.++.+.+-+ ||+ | .+|++-+|++....+
T Consensus 258 PGe~GADIvvG~~QrfGvPmgfGG-P-hag~fA~~~~~~R~m 297 (450)
T COG0403 258 PGEFGADIVVGSAQRFGVPMGFGG-P-HAGYFAVKDEFKRQM 297 (450)
T ss_pred ccccCCceEEecCcccCCCcCCCC-c-ceeeeeEhHhHhhcC
Confidence 2468999999999995 665 3 577899998875444
No 317
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=96.12 E-value=0.096 Score=59.80 Aligned_cols=134 Identities=12% Similarity=0.155 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHH--HHHHhh---------CCCCCCCe--EEEecccCchhHHHHHHHHH
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAF--KLLAES---------YPFHTNKK--LLTMFDYESQSVNWMAQSAK 263 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeAL--nLVaes---------lpf~~Gd~--ILT~~DhEHnSVl~~~~~Ak 263 (872)
+-+-++|+-.|++||+++++ |+...|.+=.+ .+|..+ -||...+. +|.+. +-...=...++
T Consensus 69 ~Gipe~r~l~a~llgv~~~~--viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPv----PGYDRHFai~E 142 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPEN--VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPV----PGYDRHFAITE 142 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGG--EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEE----S--HHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHH--EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecC----CCchHHHHHHH
Confidence 35678999999999999875 66555543321 123222 36754433 45431 11111123467
Q ss_pred HcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHH-H----HHCCcEEEeecc
Q 002866 264 EKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMAL-A----QQNHWHVLLDAG 338 (872)
Q Consensus 264 rkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~-A----re~G~~VLVDAA 338 (872)
..|++...||.... | -|++.+++++... ..-.++.++|.-||.||+.|+=+.++. | ...+..++.|=|
T Consensus 143 ~~Giemi~VpM~~d-G-PDmD~Ve~LV~~D-----~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNA 215 (425)
T PF12897_consen 143 HFGIEMIPVPMTED-G-PDMDMVEELVAED-----PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNA 215 (425)
T ss_dssp HCT-EEEEEEEETT-E-E-HHHHHHHTHTS-----TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-T
T ss_pred hhCcEEEecCCCCC-C-CCHHHHHHHHhcC-----CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecC
Confidence 78999999999763 3 4889999988642 223689999999999999999887654 3 256888999988
Q ss_pred ccCCC
Q 002866 339 SLGPK 343 (872)
Q Consensus 339 Q~aG~ 343 (872)
=++.+
T Consensus 216 Y~vHh 220 (425)
T PF12897_consen 216 YAVHH 220 (425)
T ss_dssp TTT-B
T ss_pred ceEee
Confidence 65554
No 318
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=96.08 E-value=0.12 Score=59.67 Aligned_cols=211 Identities=13% Similarity=0.134 Sum_probs=113.6
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|+|..+. +--.+.+.+++.+ -...+ ..++-++ ....+.=+++.+++.... ..|.|
T Consensus 51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~--------q~~~~---~~~~~~~--~~~~~la~~L~~~~~~~~--~~v~f 115 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQ--------GAERG---TSYGLTS--EQEILFAEELFSYLGLED--HKIRF 115 (433)
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHH--------HHHhC---CCCCCCC--HHHHHHHHHHHHhCCCCc--CEEEE
Confidence 45789998554 3345677776533 11111 1222222 223344455666664322 26999
Q ss_pred eCCHHHHHHHHHhh-CCCCCCC-eEEEecccCchhHHHHHHHHHHcCc------EE--------EEEeccCCCCccCHHH
Q 002866 222 TVSRGSAFKLLAES-YPFHTNK-KLLTMFDYESQSVNWMAQSAKEKGA------KV--------YSAWFKWPTLKLCSTD 285 (872)
Q Consensus 222 TsnATeALnLVaes-lpf~~Gd-~ILT~~DhEHnSVl~~~~~AkrkGa------eV--------~~Vpvd~p~g~Id~ed 285 (872)
+.++|||+.....- ..+ .|+ +|++....-|....+......-.+- .+ ..+.+.. -+.++
T Consensus 116 ~~SGsEA~e~AiklAr~~-tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~ 190 (433)
T PRK00615 116 VSSGTEATMTAVRLARGI-TGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY----NDFQI 190 (433)
T ss_pred eCchHHHHHHHHHHHHHh-hCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC----CCHHH
Confidence 99999987654432 122 344 4665433224322110000000000 00 0011111 14677
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----H-HHHHHHCCcEEEeeccccC---CCCCccCCCCCCCCcE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----W-MALAQQNHWHVLLDAGSLG---PKDMDSLGLSLFRPDF 357 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~-I~~Are~G~~VLVDAAQ~a---G~~mipLDLs~l~~DF 357 (872)
+++.|... ..+...|.+..+-...|.+.|.. . ...|+++|+++++|=+|.+ |. +.-...-...||+
T Consensus 191 l~~~l~~~-----~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~-~ga~~~~gv~PDi 264 (433)
T PRK00615 191 FQTVMNSL-----GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQ-GGAAAIYHVKPDI 264 (433)
T ss_pred HHHHHHhc-----CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccH-hHHHHhcCCCCCe
Confidence 88877532 13467888888878889988853 3 3567899999999999842 21 1111122347998
Q ss_pred EEEcccccCCCC-CCceEEEEEeCCCcccccC
Q 002866 358 IITSFYRVFGFD-PTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 358 lv~S~HK~fG~~-PtGvG~LyVRk~~i~~L~P 388 (872)
++ +=|.+|+. | +|++..++++++.+.+
T Consensus 265 ~~--~gK~lggG~p--~~av~~~~~i~~~~~~ 292 (433)
T PRK00615 265 TV--YGKILGGGLP--AAAVVAHKSIMDHLAP 292 (433)
T ss_pred EE--EcccccCCcc--eeeeeecHHHHhhhcC
Confidence 76 46877630 2 7888889988877754
No 319
>PRK06062 hypothetical protein; Provisional
Probab=96.06 E-value=0.22 Score=57.91 Aligned_cols=218 Identities=12% Similarity=0.051 Sum_probs=114.2
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||..+. +--.+.+++++.+ -...+. +......+ ....+.=++|++++...-+ .|.|
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~--------q~~~~~-~~~~~~~~--~~~~~lae~L~~~~p~~~~--~v~f 117 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQE--------QAARLC-TVAPAHAN--DARSEAARLIAERAPGDLS--KVFF 117 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHH--------HHHhcC-CcCCccCC--HHHHHHHHHHHHhCCCCCC--EEEE
Confidence 45789998653 3345677777543 111111 11111111 2233444566666543222 6999
Q ss_pred eCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHHH---HcC-----cEEEEEeccCCC-Ccc----C-----
Q 002866 222 TVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSAK---EKG-----AKVYSAWFKWPT-LKL----C----- 282 (872)
Q Consensus 222 TsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~Ak---rkG-----aeV~~Vpvd~p~-g~I----d----- 282 (872)
+.++|||......- ..+....+||+....-|....+...... ... ..+..++...+. ... +
T Consensus 118 ~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 197 (451)
T PRK06062 118 TNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECE 197 (451)
T ss_pred cCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHH
Confidence 99999987764442 1222234566553322443332221100 000 012222221110 000 1
Q ss_pred --HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC--CccCCCCC
Q 002866 283 --STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSL 352 (872)
Q Consensus 283 --~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~ 352 (872)
.++|+++|... ...+...|.+--+...-|.+.| ++.+ +.|+++|+++++|=+|. .|.. +.-.+.-.
T Consensus 198 ~~~~~le~~l~~~----~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~g 273 (451)
T PRK06062 198 RALAHLERVIELE----GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFG 273 (451)
T ss_pred HHHHHHHHHHHhc----CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcC
Confidence 45566666421 1134566666667777899998 6654 56799999999999976 3320 10112223
Q ss_pred CCCcEEEEcccccCCCCCCc---eEEEEEeCCCccccc
Q 002866 353 FRPDFIITSFYRVFGFDPTG---FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtG---vG~LyVRk~~i~~L~ 387 (872)
+.||++++ =|-+|+ | +|+++.++++++.+.
T Consensus 274 v~PDi~t~--gK~lgg---G~~Pigav~~~~~i~~~~~ 306 (451)
T PRK06062 274 VVPDLITF--AKGVNS---GYVPLGGVAISEAIAATFA 306 (451)
T ss_pred CCCCeeee--chhhhc---CCcCcEEEEEcHHHHHHhc
Confidence 57997765 587664 4 789999988776664
No 320
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=96.00 E-value=0.21 Score=57.67 Aligned_cols=82 Identities=11% Similarity=0.058 Sum_probs=55.0
Q ss_pred CceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCc
Q 002866 301 AAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTG 372 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtG 372 (872)
++..|.+.-+....|.+.| ++.+ +.|+++|+.+++|=+|. .|.. +.-...-...||.++++ |-+|+ |
T Consensus 219 ~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~g--K~l~~---G 293 (443)
T PRK06058 219 NLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTA--KGIAG---G 293 (443)
T ss_pred ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEc--ccccC---C
Confidence 4666667667667788876 4433 46789999999999975 2210 11112223578999986 97663 4
Q ss_pred --eEEEEEeCCCccccc
Q 002866 373 --FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 --vG~LyVRk~~i~~L~ 387 (872)
+|+++.++++++.+.
T Consensus 294 ~Pi~av~~~~~i~~~~~ 310 (443)
T PRK06058 294 LPLSAVTGRAEIMDAPH 310 (443)
T ss_pred CccEEEEEcHHHHhhcc
Confidence 889998888766554
No 321
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=95.99 E-value=0.12 Score=58.80 Aligned_cols=202 Identities=13% Similarity=0.092 Sum_probs=118.0
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHH-hcCCCC---CCCcE--EEeC
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMD-HLNIPE---NEYGL--VFTV 223 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~-lLgA~~---dEY~V--VFTs 223 (872)
-+|-|-.+-+|.-+.|.+|.. .+.....+ ..|-+.. -+..-++.+++ +||.+. .+..| |=|.
T Consensus 34 GvY~de~Gk~pvl~aV~~Ae~--------~l~~~~~~-k~Yl~i~---G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~ 101 (396)
T COG1448 34 GVYKDEDGKTPVLRAVKKAEK--------RLLEQEKT-KNYLPIE---GLPEFLEAVQKLLFGADSPALAEDRVATVQTL 101 (396)
T ss_pred eeeeCCCCCcchhHHHHHHHH--------Hhhccccc-cccCCcC---CcHHHHHHHHHHhcCCCcHHHHhhhHhheecC
Confidence 489999999998888877632 11111111 1122221 12233444444 456441 11123 3468
Q ss_pred CHHHHHHHHHhhCC-CCCCCeEEEec-c-cCchhHHHHHHHHHHcCcEEEEEe-ccCCCCccCHHHHHHHHhhhhccCCC
Q 002866 224 SRGSAFKLLAESYP-FHTNKKLLTMF-D-YESQSVNWMAQSAKEKGAKVYSAW-FKWPTLKLCSTDLRKQISSKKRRKKD 299 (872)
Q Consensus 224 nATeALnLVaeslp-f~~Gd~ILT~~-D-hEHnSVl~~~~~AkrkGaeV~~Vp-vd~p~g~Id~edLe~~I~~~~rr~~~ 299 (872)
|+|.||++.++-+. +.+...|.++. . -.|..+ -+..|.+|..-| +|..+..++.+.+...|...
T Consensus 102 GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~I------f~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a------ 169 (396)
T COG1448 102 GGTGALRVAADFLARFFPDATVWISDPTWPNHKAI------FEAAGLEVETYPYYDAETKGLDFDGMLADLKTA------ 169 (396)
T ss_pred CcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHH------HHhcCCceeeeeccccccccccHHHHHHHHHhC------
Confidence 99999999988764 22333444331 1 123322 245799996544 45555668888887777642
Q ss_pred CCceEEEEeC-ccCcccchhcHH-HHHH---HHHCCcEEEeecc-ccCCCCCccCCCCC---------CCCcEEEEcccc
Q 002866 300 SAAGLFVFPV-QSRVTGAKYSYQ-WMAL---AQQNHWHVLLDAG-SLGPKDMDSLGLSL---------FRPDFIITSFYR 364 (872)
Q Consensus 300 ~~T~LVa~p~-vSNvTG~i~PLe-~I~~---Are~G~~VLVDAA-Q~aG~~mipLDLs~---------l~~DFlv~S~HK 364 (872)
+...+|.+-. ++|.||.-...+ |... .+++++..++|-| |..+.. ++-.. ...=|++.||-|
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G---leeDa~~lR~~a~~~~~~lva~S~SK 246 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG---LEEDAYALRLFAEVGPELLVASSFSK 246 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc---hHHHHHHHHHHHHhCCcEEEEehhhh
Confidence 2233444433 359999999985 7544 4899999999999 766642 33221 223578889999
Q ss_pred cCC-CCCCceEEEEEe
Q 002866 365 VFG-FDPTGFGCLLIK 379 (872)
Q Consensus 365 ~fG-~~PtGvG~LyVR 379 (872)
-|| | =.-+|++.+-
T Consensus 247 nfgLY-gERVGa~~vv 261 (396)
T COG1448 247 NFGLY-GERVGALSVV 261 (396)
T ss_pred hhhhh-hhccceeEEE
Confidence 877 3 2347776553
No 322
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=95.99 E-value=0.18 Score=57.85 Aligned_cols=219 Identities=11% Similarity=0.019 Sum_probs=114.3
Q ss_pred CCceecccCCCC------CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGFG------LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAtg------p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|+|..+.- --.+.+.+++.+. + ..+. +...+.. ......+.-+++++++.-. ...|.|
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q-------~-~~~~-~~~~~~~-~~~~~~~la~~L~~~~~~~--~~~v~f 108 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQ-------A-DKLM-HGPSGVI-YYESILKLAEELAEITPGG--LDCFFF 108 (433)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHH-------H-Hhcc-Ccccccc-CCHHHHHHHHHHHHhCCCC--CCEEEE
Confidence 457799976542 2456677765431 1 1111 0010001 1233456667788887322 226999
Q ss_pred eCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHH-----HHcC-----cEEEEEeccCCC----C----c--
Q 002866 222 TVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSA-----KEKG-----AKVYSAWFKWPT----L----K-- 280 (872)
Q Consensus 222 TsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~A-----krkG-----aeV~~Vpvd~p~----g----~-- 280 (872)
+.++++|+...+.. ..+....+|++....-|.......... .+.+ ..+..+|+.... . .
T Consensus 109 ~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (433)
T PRK08117 109 SNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCF 188 (433)
T ss_pred eCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHH
Confidence 99999986654442 112222456654432255443321110 0011 112334432110 0 0
Q ss_pred -cCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeeccccC-CCC--CccCCCC
Q 002866 281 -LCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSLG-PKD--MDSLGLS 351 (872)
Q Consensus 281 -Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~a-G~~--mipLDLs 351 (872)
-+.+++++++.... ...+...|.+--+....|.+.| ++. .+.|+++|+++++|=+|.. |.. +....--
T Consensus 189 ~~~~~~l~~~~~~~~---~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~ 265 (433)
T PRK08117 189 LECLRDLESLFKHQV---TPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTF 265 (433)
T ss_pred HHHHHHHHHHHHhcc---CCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhc
Confidence 13345555554210 1235778888778888899998 764 4678999999999999762 110 0011111
Q ss_pred CCCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccc
Q 002866 352 LFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSL 386 (872)
Q Consensus 352 ~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L 386 (872)
...||+ .++=|.+|. | +|++..+++.++.+
T Consensus 266 gv~pDi--~t~sK~lg~---G~pigav~~~~~i~~~~ 297 (433)
T PRK08117 266 GVVPDI--MTIAKGIAS---GLPLSAVVASKELMEQW 297 (433)
T ss_pred CCCCCE--eehhhhccC---CCcceeEEEcHHHHhhc
Confidence 235786 466788773 4 78888887766544
No 323
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=95.98 E-value=0.35 Score=55.66 Aligned_cols=208 Identities=15% Similarity=0.128 Sum_probs=113.7
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++..|||..+. +--.+.+.+++.+ .+.....++.++ ....+.-+++.+++.. .+ .|.|
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~-----------q~~~~~~~~~~~--~~~~~la~~l~~~~p~-~~--~v~f 114 (428)
T PRK12389 51 DGNKYIDYLAAYGPIITGHAHPHITKAITE-----------AAENGVLYGTPT--ELEIEFAKMLKEAIPS-LE--KVRF 114 (428)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHH-----------HHHhCCccCCCC--HHHHHHHHHHHHhCCC-Cc--EEEE
Confidence 45789997433 2234666666433 111111233333 2233455556665531 22 6999
Q ss_pred eCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHHHH----------cCc------EEEEEeccCCCCccCHH
Q 002866 222 TVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSAKE----------KGA------KVYSAWFKWPTLKLCST 284 (872)
Q Consensus 222 TsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~Akr----------kGa------eV~~Vpvd~p~g~Id~e 284 (872)
+.++|||+.....- ..+....+||+....-|....+....... .|+ .+..+| .+ +.+
T Consensus 115 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----d~~ 188 (428)
T PRK12389 115 VNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP--FN----DIE 188 (428)
T ss_pred eCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcC--CC----CHH
Confidence 99999987764442 22322345665433234433332211100 011 111111 11 467
Q ss_pred HHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeeccccCCCCCcc--CCCCCCCCcE
Q 002866 285 DLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSLGPKDMDS--LGLSLFRPDF 357 (872)
Q Consensus 285 dLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~aG~~mip--LDLs~l~~DF 357 (872)
.+++.|... ..+...|.+--+....|.+.| ++.+ +.|+++|+++++|=+|.+-....- ...-...||+
T Consensus 189 ~l~~~l~~~-----~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDi 263 (428)
T PRK12389 189 ALKEALDKW-----GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDL 263 (428)
T ss_pred HHHHHHHhc-----CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCe
Confidence 788777532 124667777777777899998 6644 567999999999999875320000 1112347998
Q ss_pred EEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 358 IITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 358 lv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
+++ =|.+|+ | +|++..++++++.+.
T Consensus 264 vt~--gK~lgg---G~Pi~av~~~~~i~~~~~ 290 (428)
T PRK12389 264 TAL--GKIIGG---GLPIGAYGGRKDIMEQVA 290 (428)
T ss_pred eee--chhhcC---CCceeEEeEHHHHHhhhc
Confidence 654 576553 3 788888988877664
No 324
>PRK12566 glycine dehydrogenase; Provisional
Probab=95.94 E-value=0.075 Score=66.60 Aligned_cols=215 Identities=13% Similarity=0.099 Sum_probs=120.2
Q ss_pred CCCchhHHHHHhhcccCCCCceecccCCCCCCc---HHHH-HHhhhcccccHHHHHHhhccCcCcC---CCchHHHHHHH
Q 002866 130 YQSSDKIDQLRANEYLHLSPKVCLDYCGFGLFS---YIQT-LHYWESSTFSLSEITANLSNHALYG---GAEKGTVEHDI 202 (872)
Q Consensus 130 y~~t~~ID~lR~~EFP~L~~~IYLDyAAtgp~p---~~Vi-eA~~e~~~F~ls~i~~nL~~~~~yg---NpsS~~~ieeA 202 (872)
..+.+.+..+++ ... ++.+|-.+-|.+-++ +.|+ +.+.+.|.| ++. +..|- .....+.+-+-
T Consensus 61 ~sE~e~~~~~~~--~a~-kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~----yTa----YTPYQpEisQG~Lqal~e~ 129 (954)
T PRK12566 61 LDEQAALARLRG--YAE-QNQVWTSLIGMGYHGTVTPTVILRNVLENPGW----YTA----YTPYQPEIAQGRLEALLNF 129 (954)
T ss_pred CCHHHHHHHHHH--HHh-cCCCccccccccccCCcCcHHHHHHHHhCchh----hhc----CCCCCchhhhHHHHHHHHH
Confidence 444445555554 111 233455555555433 3555 665554444 221 12232 11123677778
Q ss_pred HHHHHHhcCCCCCCCcEEEeCCHH---HHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccCCC
Q 002866 203 KTRIMDHLNIPENEYGLVFTVSRG---SAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKWPT 278 (872)
Q Consensus 203 RerIA~lLgA~~dEY~VVFTsnAT---eALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~p~ 278 (872)
..-|+++.|.+-..-++ -.++| ||+.+... +.-.+..+++++.. -|+... -++.+++..|++|+.
T Consensus 130 Qtmi~~LtGm~vaNASl--~D~atA~aEA~~ma~~-~~~~k~~~~~v~~~-~hP~~~~v~~t~~~~~g~~i~~------- 198 (954)
T PRK12566 130 QQMTIDLTGLDLANASL--LDEATAAAEAMALAKR-VAKSKSNRFFVDEH-CHPQTLSVLRTRAEGFGFELVV------- 198 (954)
T ss_pred HHHHHHHhCchhhhhhh--ccchhHHHHHHHHHHH-HhhcCCCEEEECCC-CCHHHHHHHHHhhhcCCcEEEE-------
Confidence 88999999876321111 23444 45555332 21112345666533 344433 345667778888874
Q ss_pred CccCHHHHHHHHhhhhccCCCCCceEEEEeCcc-CcccchhcHH-HHHHHHHCCcEEEeecc---ccCCCCCccCCCCCC
Q 002866 279 LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQS-RVTGAKYSYQ-WMALAQQNHWHVLLDAG---SLGPKDMDSLGLSLF 353 (872)
Q Consensus 279 g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vS-NvTG~i~PLe-~I~~Are~G~~VLVDAA---Q~aG~~mipLDLs~l 353 (872)
++++.++. ..++++..++ |..|.+.+++ +++.+|++|++++ +++ +++.. -.-.++
T Consensus 199 -----~~~~~~~~----------~~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll----~~Pge~ 258 (954)
T PRK12566 199 -----DAVDNLAA----------HAVFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVL----TPPGEL 258 (954)
T ss_pred -----cchhhcCC----------CCEEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCC----CChhhc
Confidence 22333221 1255555555 8999999997 4578899999855 444 33322 112568
Q ss_pred CCcEEEEccccc-----CCCCCCceEEEEEeCCCcccccC
Q 002866 354 RPDFIITSFYRV-----FGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 354 ~~DFlv~S~HK~-----fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
++|.++.++.-+ ||+ | +.|++-+|+.....+.-
T Consensus 259 GADI~vG~~Q~fGvp~~~GG-P-~ag~~a~~~~~~R~~PG 296 (954)
T PRK12566 259 GADVVLGSTQRFGVPMGYGG-P-HAAYFACRDDYKRAMPG 296 (954)
T ss_pred CCcEEeeCCCcCCCCCCCCC-C-CeeeeeehHHHHhhCCC
Confidence 999999888764 777 4 79999999987666653
No 325
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=95.91 E-value=0.29 Score=57.48 Aligned_cols=208 Identities=13% Similarity=0.100 Sum_probs=112.7
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|+|+.+. +--.+.+.+++.+ .+.....++.++. ...+.=++|.+.+.. .+ .|.|
T Consensus 97 dG~~yiD~~~g~g~~~lGh~~p~v~~av~~-----------ql~~~~~~~~~~~--~~~~lAe~l~~~~p~-~~--~v~f 160 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIGHADDEVLAALAE-----------TMKKGTSFGAPCL--LENVLAEMVIDAVPS-VE--MVRF 160 (474)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHH-----------HHhhCCCCCCCCH--HHHHHHHHHHHhCCC-CC--EEEE
Confidence 45789998543 2234667776543 1111123444442 222333445555532 12 6999
Q ss_pred eCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHHH----------HcCc------EEEEEeccCCCCccCHH
Q 002866 222 TVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSAK----------EKGA------KVYSAWFKWPTLKLCST 284 (872)
Q Consensus 222 TsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~Ak----------rkGa------eV~~Vpvd~p~g~Id~e 284 (872)
+.++|||......- ..+....+|+.....-|....++..... ..|+ .+..+| ++ +.+
T Consensus 161 ~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~n----d~~ 234 (474)
T PLN02482 161 VNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP--YN----DLE 234 (474)
T ss_pred eCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec--CC----ChH
Confidence 99999987654432 1122234566543322442211110000 0011 111122 21 467
Q ss_pred HHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-----HHHHHHHCCcEEEeeccccCCCCCcc-C---CCCCCCC
Q 002866 285 DLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-----WMALAQQNHWHVLLDAGSLGPKDMDS-L---GLSLFRP 355 (872)
Q Consensus 285 dLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-----~I~~Are~G~~VLVDAAQ~aG~~mip-L---DLs~l~~ 355 (872)
.+++.|..+ ......|.+-.+-...|.+.|.. ..+.|+++|+.+++|=+|. |.. .. . ..-...|
T Consensus 235 ~l~~~l~~~-----~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR-~g~~ga~~~~gv~P 307 (474)
T PLN02482 235 AVKKLFEAN-----KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFR-IAYGGAQEYFGITP 307 (474)
T ss_pred HHHHHHHhC-----CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cee-cCcchHhHHhCCCC
Confidence 788877532 13467777877878889988853 2356789999999999984 311 11 0 1112368
Q ss_pred cEEEEcccccCCCC-CCceEEEEEeCCCcccccC
Q 002866 356 DFIITSFYRVFGFD-PTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 356 DFlv~S~HK~fG~~-PtGvG~LyVRk~~i~~L~P 388 (872)
|.+++ =|.+|+. | +|++..++++++.+.+
T Consensus 308 Di~t~--gK~lggG~P--igav~g~~ei~~~~~~ 337 (474)
T PLN02482 308 DLTTL--GKVIGGGLP--VGAYGGRREIMEMVAP 337 (474)
T ss_pred CEEEe--cchhhCCCc--eEEEEEcHHHHHhhcc
Confidence 98655 6876630 2 7999999988877653
No 326
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=95.65 E-value=0.35 Score=56.03 Aligned_cols=218 Identities=11% Similarity=0.046 Sum_probs=114.3
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||..+. +--.+.+++++.+. + ..+.....++.++ ....++-+++++++....+ .|.|
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q-------l-~~l~~~~~~~~~~--~~~~~la~~l~~~~p~~~~--~v~f 111 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQ-------A-GELDYAPAFQMGH--PKAFELANRIAEIAPGGLN--HVFF 111 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHH-------H-HhCCCcccCCcCC--HHHHHHHHHHHHhCCCCCC--EEEE
Confidence 45789998544 45556777765331 1 1111001111222 2234555667777642222 5999
Q ss_pred eCCHHHHHHHHHh---hCC---CCCC-CeEEEecccCchhHHHHHHH----HHHc--C---cEEEEEeccCC--CCcc--
Q 002866 222 TVSRGSAFKLLAE---SYP---FHTN-KKLLTMFDYESQSVNWMAQS----AKEK--G---AKVYSAWFKWP--TLKL-- 281 (872)
Q Consensus 222 TsnATeALnLVae---slp---f~~G-d~ILT~~DhEHnSVl~~~~~----Akrk--G---aeV~~Vpvd~p--~g~I-- 281 (872)
+.++|||+..... .+. -+++ .+||+...--|......... ..+. + ..+..+|.... ...+
T Consensus 112 ~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 191 (442)
T PRK13360 112 TNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSK 191 (442)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCC
Confidence 9999997665433 221 0122 35665433223322111100 0111 1 12333443210 0000
Q ss_pred --------CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC--C
Q 002866 282 --------CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD--M 345 (872)
Q Consensus 282 --------d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~--m 345 (872)
..++|+++|... ...+...|.+--+....|.+.| ++.+ +.|+++|+++++|=+|. .|.. +
T Consensus 192 ~~~~~~~~~~~~le~~l~~~----~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~ 267 (442)
T PRK13360 192 GQPEHGAELADELERLVTLH----DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAP 267 (442)
T ss_pred ChHHHHHHHHHHHHHHHHhc----CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc
Confidence 134666666421 1235678888888888999999 7654 56799999999999983 3320 1
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCCCc---eEEEEEeCCCcccc
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDPTG---FGCLLIKKSVMGSL 386 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~PtG---vG~LyVRk~~i~~L 386 (872)
.-.......||++++ =|.+|+ | +|++.+++++.+.+
T Consensus 268 ~a~~~~gv~PDivt~--gK~l~g---G~~P~gav~~~~~i~~~~ 306 (442)
T PRK13360 268 FAAQYFGVTPDLLTC--AKGLTN---GAIPMGAVFVSSEIHDAF 306 (442)
T ss_pred hhhhhcCCCCceeee--eecccc---CccceEEEEEcHHHHHHh
Confidence 112223356898755 687653 3 78888887776544
No 327
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=95.64 E-value=0.31 Score=56.47 Aligned_cols=213 Identities=14% Similarity=0.088 Sum_probs=125.5
Q ss_pred CCceecccCCC-CC-----CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF-GL-----FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt-gp-----~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|.||+.. +| -++.|.+|+.+ .+.....||.|...+ ++-| +.|.+.+..-+ -|=|
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~-----------~l~~G~~fg~Pte~E-i~~A-ell~~~~p~~e---~vrf 114 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQE-----------QLERGLSFGAPTELE-VELA-ELLIERVPSIE---KVRF 114 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHH-----------HHHhcCCCCCCCHHH-HHHH-HHHHHhcCccc---EEEE
Confidence 45778898754 33 34667776533 222345789997432 2323 66777766532 4999
Q ss_pred eCCHHHHHHHH---HhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCc-----------------EEEEEeccCCCCcc
Q 002866 222 TVSRGSAFKLL---AESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGA-----------------KVYSAWFKWPTLKL 281 (872)
Q Consensus 222 TsnATeALnLV---aeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGa-----------------eV~~Vpvd~p~g~I 281 (872)
++++|||.... |++|. ..++|+-...+-|....+++..+. .|+ .+..+|++
T Consensus 115 vnSGTEAtmsAiRlARa~T--gR~kIikF~G~YHG~~D~~lv~ag-sg~~t~g~p~s~Gvp~~~a~~ti~~~yN------ 185 (432)
T COG0001 115 VNSGTEATMSAIRLARAYT--GRDKIIKFEGCYHGHSDSLLVKAG-SGAATLGSPSSPGVPADVAKHTLVLPYN------ 185 (432)
T ss_pred ecchhHHHHHHHHHHHHhh--CCCeEEEEcCCCCCCccHHHhhcC-cCcccCCCCCCCCCChhhhccEEEecCC------
Confidence 99999997764 44553 334555433334555555543221 121 22333332
Q ss_pred CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HH-HHHHHCCcEEEeecccc------CCCCCccCCC
Q 002866 282 CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WM-ALAQQNHWHVLLDAGSL------GPKDMDSLGL 350 (872)
Q Consensus 282 d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I-~~Are~G~~VLVDAAQ~------aG~~mipLDL 350 (872)
|.+.+++++..+ ..+..-|.+--+-.-.|.+.|-+ .+ ++++++|+.+++|=+-. .|. -+.
T Consensus 186 D~~al~~~~~~~-----g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGa----q~~ 256 (432)
T COG0001 186 DLEALEEAFEEY-----GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGA----QGY 256 (432)
T ss_pred CHHHHHHHHHHc-----CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccc----ccc
Confidence 578888888753 12344444444444478888864 23 45689999999998743 221 112
Q ss_pred CCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccCCCCCCCCCe
Q 002866 351 SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQSGQTGSGM 397 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~~~~~GgGt 397 (872)
-.+.||+.++ =|+.|+ =-=+|++-.|++.++.+.|.-..+..||
T Consensus 257 ~gi~PDlttl--GKiIGG-GlP~ga~gGr~eiM~~~~p~g~vyqaGT 300 (432)
T COG0001 257 YGVEPDLTTL--GKIIGG-GLPIGAFGGRAEIMEQLAPLGPVYQAGT 300 (432)
T ss_pred cCcCcchhhh--hhhhcC-CcceeeeccHHHHHhhhCCCCCccccCC
Confidence 2346888664 588664 1228999999999998877643334444
No 328
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=95.57 E-value=0.21 Score=57.96 Aligned_cols=95 Identities=12% Similarity=0.159 Sum_probs=61.0
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCC--CCccCCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPK--DMDSLGLSLFRP 355 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~--~mipLDLs~l~~ 355 (872)
+++++++... ...+...|.+--+....|.+.| ++.+ +.|+++|+++++|=+|. .|. .+.-.+.-...|
T Consensus 205 ~~l~~~i~~~----~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~P 280 (445)
T PRK09221 205 DDLERLVALH----DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTP 280 (445)
T ss_pred HHHHHHHHhc----CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCC
Confidence 4666666532 1135677778778888999999 7644 56799999999999974 331 011122223468
Q ss_pred cEEEEcccccCCC--CCCceEEEEEeCCCcccc
Q 002866 356 DFIITSFYRVFGF--DPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 356 DFlv~S~HK~fG~--~PtGvG~LyVRk~~i~~L 386 (872)
|+++++ |-+|+ -| +|++.+++++++.+
T Consensus 281 Di~~~g--K~l~gG~~P--i~av~~~~~i~~~~ 309 (445)
T PRK09221 281 DIITFA--KGLTNGAIP--MGAVIASDEIYDAF 309 (445)
T ss_pred CEEEec--cccccCccc--ceeeEEcHHHHHhh
Confidence 987664 65542 13 68888888776554
No 329
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=95.52 E-value=0.081 Score=59.89 Aligned_cols=168 Identities=13% Similarity=0.118 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEe-CCHHHHHHHHHhhCCCCCCCeEEEecccC---chhHHHHHHHHHHcCcEEEEE
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFT-VSRGSAFKLLAESYPFHTNKKLLTMFDYE---SQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFT-snATeALnLVaeslpf~~Gd~ILT~~DhE---HnSVl~~~~~AkrkGaeV~~V 272 (872)
++..-+++|.++.||++|+-+.|=-- -+++-|.--|-.++ .+++++|+-. |.+ |-+- +... ..+.+.-..+
T Consensus 86 ~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtal-l~Ph~RiMGL-DLP~GGHLsH-Gy~T--~~kkISa~Si 160 (477)
T KOG2467|consen 86 QIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTAL-LKPHERIMGL-DLPSGGHLSH-GYQT--PTKKISATSI 160 (477)
T ss_pred HHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhh-cCCCCeeeec-cCCCCCcccc-cccc--CCceeeeeee
Confidence 44455889999999999988776544 33444444444444 5778887632 222 2111 1111 0011222211
Q ss_pred -------eccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHH-HHHHCCcEEEeeccccCCC-
Q 002866 273 -------WFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMA-LAQQNHWHVLLDAGSLGPK- 343 (872)
Q Consensus 273 -------pvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~-~Are~G~~VLVDAAQ~aG~- 343 (872)
.++..+|-||.+.|++.-..+ +.+|++.-.-+ --..+++..++ .|.+.|++++.|.||.-|.
T Consensus 161 yFeSmPYkv~~~TG~IDYD~Le~~A~~f-------rPk~iiaG~Sa--Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLV 231 (477)
T KOG2467|consen 161 YFESMPYKVDPSTGYIDYDKLEKTATLF-------RPKLIIAGTSA--YSRLIDYARFRKIADKVGAYLMADMAHISGLV 231 (477)
T ss_pred ecccCceeeCCCCCceehHHHHHHHHhc-------CCcEEEecccc--chhhccHHHHHHHHHhcCceeehhhhhHHHHH
Confidence 356667899999999776554 35555543221 23456666554 5678999999999985432
Q ss_pred --CCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 344 --DMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 344 --~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
..+|=.+ -.||.++.+.||-+-+ |.| |+++.|+..
T Consensus 232 AA~vipsPF--ey~DiVTTTTHKsLRG-PRg-~mIFyRkGv 268 (477)
T KOG2467|consen 232 AAGVIPSPF--EYCDIVTTTTHKSLRG-PRG-AMIFYRKGV 268 (477)
T ss_pred hcccCCCcc--cccceeeccccccccC-Ccc-eeEEEeccC
Confidence 0011111 2589999999999888 875 666678864
No 330
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.40 E-value=0.043 Score=63.29 Aligned_cols=171 Identities=14% Similarity=0.195 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCH-HHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSR-GSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnA-TeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
+.-.++-+.+|+|+|+.. .+||.-|- |-+.+ +-++ ..+|.-|++. +..|.|+. .-|+-.|+.+++..-+
T Consensus 182 ~~hkelE~l~A~f~g~e~---a~vF~mGf~TNs~~--~p~l-~~~gsLIiSD-elNHaSi~---~GaRLSgAtiRVfkHN 251 (519)
T KOG1357|consen 182 EEHKELEELVARFLGVED---AIVFSMGFATNSMN--IPSL-LGKGSLIISD-ELNHASLI---TGARLSGATTRVFRHN 251 (519)
T ss_pred HHHHHHHHHHHHhcCCcc---eEEEeccccccccC--ccee-ecCCcceeec-cccchhee---ccccccCceEEEEecC
Confidence 344567778999999964 49998772 11111 1112 2345445544 56778764 2345568888887643
Q ss_pred CCCCccCHHHHHHHHhhhh-----ccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc--
Q 002866 276 WPTLKLCSTDLRKQISSKK-----RRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS-- 347 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~-----rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip-- 347 (872)
++.+|+++|+... +....-+..++++-....+-|.+-.+. .+...+++.+++++|.|+++|. |-+
T Consensus 252 ------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA-~g~tG 324 (519)
T KOG1357|consen 252 ------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGA-MGATG 324 (519)
T ss_pred ------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccc-cCCCC
Confidence 4677777665431 111122456888888888999999996 5667789999999999998775 212
Q ss_pred ------CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 348 ------LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 348 ------LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
+.+....+|.+-..|-|.||+ +=|.+--++..++.|+
T Consensus 325 rgvce~~g~d~~dvDImMGtftKSfga---~GGyiagsk~lid~lr 367 (519)
T KOG1357|consen 325 RGVCEYFGVDPEDVDIMMGTFTKSFGA---AGGYIAGSKELIDYLR 367 (519)
T ss_pred cceeeccCCCchhheeecceehhhccc---ccceecCcHHHHhhhc
Confidence 233445688999999998885 3454555555555543
No 331
>PRK06541 hypothetical protein; Provisional
Probab=95.36 E-value=0.29 Score=57.06 Aligned_cols=95 Identities=9% Similarity=0.093 Sum_probs=62.2
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeeccc-cCCCC--CccCCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGS-LGPKD--MDSLGLSLFRP 355 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ-~aG~~--mipLDLs~l~~ 355 (872)
+.+++++... .......|.+.-+.+..|.+.| ++. .+.|+++|+++++|=+| ..|.. +.-...-...|
T Consensus 208 ~~l~~~l~~~----~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~P 283 (460)
T PRK06541 208 DRIEEAIEFE----GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVP 283 (460)
T ss_pred HHHHHHHHhc----CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCC
Confidence 4566666421 1124677778778889999998 664 45679999999999997 34321 00111123468
Q ss_pred cEEEEcccccCCCCCCc---eEEEEEeCCCccccc
Q 002866 356 DFIITSFYRVFGFDPTG---FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtG---vG~LyVRk~~i~~L~ 387 (872)
|+++ +=|.+|+ | +|+++.+++.++.+.
T Consensus 284 Divt--~gK~l~~---G~~pigav~~~~~i~~~~~ 313 (460)
T PRK06541 284 DIIT--CAKGITS---GYSPLGAMIASDRLFEPFL 313 (460)
T ss_pred CEEE--ecccccC---CccceeEEEEcHHHHHHhh
Confidence 9876 5687663 3 799998888765553
No 332
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=95.29 E-value=0.24 Score=55.09 Aligned_cols=165 Identities=13% Similarity=0.048 Sum_probs=102.5
Q ss_pred HHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchh---HHHHH----HHHHHcCcEEEEEeccCC
Q 002866 205 RIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQS---VNWMA----QSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 205 rIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnS---Vl~~~----~~AkrkGaeV~~Vpvd~p 277 (872)
--|+.||+...-...-|. ++|+|+..+..++ +++||+++...-.+... |..++ ..++..|++.+.+|+..
T Consensus 73 vyA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~-LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~- 149 (416)
T COG4100 73 VYAQVFGAEAALVRPQII-SGTHAIACALFGI-LRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTA- 149 (416)
T ss_pred HHHHHhccccceeeeeee-cchhHHHHHHHhc-cCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeeccccc-
Confidence 347788886442223344 5689999998887 58999976432212222 33443 34566799999999875
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCcc----CcccchhcHH-HHHHHHH--CCcEEEeecc--ccCCCCCccC
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQS----RVTGAKYSYQ-WMALAQQ--NHWHVLLDAG--SLGPKDMDSL 348 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vS----NvTG~i~PLe-~I~~Are--~G~~VLVDAA--Q~aG~~mipL 348 (872)
++.||.+.+...|+. +|+|+.+.--. +.+=.+-.++ .|...++ -++.++||-| -++-. ..|.
T Consensus 150 ~gkiD~~~v~~~i~~--------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~-~EPt 220 (416)
T COG4100 150 DGKIDIQAVKTAISD--------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEE-KEPT 220 (416)
T ss_pred CCcccHHHHHHhcCc--------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhc-cCcc
Confidence 689999999888863 69999886432 1222233333 2344443 5788999998 34432 1343
Q ss_pred CCCCCCCcEEEEcccccCCCC-CCceEEEEEeCCCcc
Q 002866 349 GLSLFRPDFIITSFYRVFGFD-PTGFGCLLIKKSVMG 384 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~~-PtGvG~LyVRk~~i~ 384 (872)
..++|.++.|.-|--|+. .+--|.+.-|.++.+
T Consensus 221 ---~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve 254 (416)
T COG4100 221 ---HVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVE 254 (416)
T ss_pred ---ccchhhhccceeeCCCCceeeccceeechHHHHH
Confidence 458999999999975531 111244555555543
No 333
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=95.11 E-value=0.49 Score=55.93 Aligned_cols=95 Identities=12% Similarity=0.142 Sum_probs=61.4
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRP 355 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~ 355 (872)
++|+++|... ...+...|.+--+....|.+.| ++.+ +.|+++|+++++|=+|. .|.. +.-.+.-...|
T Consensus 247 ~~le~~l~~~----~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~P 322 (504)
T PLN02760 247 DNLENLILKE----GPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKP 322 (504)
T ss_pred HHHHHHHHhc----CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCC
Confidence 4566666421 1124667777667777899998 7754 56799999999999983 4320 11112223469
Q ss_pred cEEEEcccccCCCCCCc---eEEEEEeCCCccccc
Q 002866 356 DFIITSFYRVFGFDPTG---FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtG---vG~LyVRk~~i~~L~ 387 (872)
|.+++ =|.+|+ | +|++++++++.+.+.
T Consensus 323 Divtl--gK~lgg---G~~PigAv~~~~~i~d~~~ 352 (504)
T PLN02760 323 DLVSL--AKALSS---AYMPIGAVLVSPEISDVIH 352 (504)
T ss_pred cEEEe--cccccC---CccccceEeecHHHHhhhh
Confidence 97665 577663 3 788888888776654
No 334
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=95.10 E-value=1.4 Score=50.77 Aligned_cols=222 Identities=8% Similarity=0.028 Sum_probs=110.7
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCC-CchHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGG-AEKGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygN-psS~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++.-|||..+. +--.+.+.+++.+. + ..+. +..++. ++ ...++-+ +++++++... ....+.
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q-------l-~~~~-~~~~~~~~~-~~~~~la-~~l~~~~p~~-~~~~~~ 105 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQ-------L-QQFT-HTAYQIVPY-ESYVTLA-EKINALAPVS-GQAKTA 105 (421)
T ss_pred CCCEEEEccCchhhhcCCCCCHHHHHHHHHH-------H-Hhcc-CcccCccCC-HHHHHHH-HHHHHhCCCC-CCceEE
Confidence 45789998554 34456677765331 1 1111 111111 22 1223333 3456665421 123699
Q ss_pred EeCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHH-----HHcCc-----EEEEEeccCCCCcc----CHHH
Q 002866 221 FTVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSA-----KEKGA-----KVYSAWFKWPTLKL----CSTD 285 (872)
Q Consensus 221 FTsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~A-----krkGa-----eV~~Vpvd~p~g~I----d~ed 285 (872)
|+.++|||+.....- ..+....+|++....-|....+..... .+.|. .+..+|+......+ +.+.
T Consensus 106 f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~ 185 (421)
T PRK09792 106 FFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDA 185 (421)
T ss_pred EeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHH
Confidence 999999976653331 112222356654332244333222110 11121 13334442211011 2355
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccchh-cH---HH-HHHHHHCCcEEEeecccc-CCCCCccCCCC--CCCCcE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKY-SY---QW-MALAQQNHWHVLLDAGSL-GPKDMDSLGLS--LFRPDF 357 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~-PL---e~-I~~Are~G~~VLVDAAQ~-aG~~mipLDLs--~l~~DF 357 (872)
+++++... ....+...|.+.-+.+.+|... |- +. .+.|+++|+++++|=++. .|..-..+-+. ...||+
T Consensus 186 l~~~~~~~---~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi 262 (421)
T PRK09792 186 IERLFKSD---IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDL 262 (421)
T ss_pred HHHHHHhc---cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcE
Confidence 66666421 0112467777777788999876 63 33 356789999999999865 32210011122 246885
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 358 IITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 358 lv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.++=|.+|+ =.-+|+++.++++++.+.
T Consensus 263 --~t~gK~l~~-G~pigav~~~~~i~~~~~ 289 (421)
T PRK09792 263 --MTMAKSLAG-GMPLSGVVGNANIMDAPA 289 (421)
T ss_pred --EEeehhhcC-CCceEEEEEcHHHHhccC
Confidence 455787652 012788888877765553
No 335
>PRK12403 putative aminotransferase; Provisional
Probab=95.07 E-value=0.41 Score=55.76 Aligned_cols=181 Identities=14% Similarity=0.074 Sum_probs=94.1
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC-C-----CCCCe-EEEecccCchhHHHHHHHHH---Hc--C
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP-F-----HTNKK-LLTMFDYESQSVNWMAQSAK---EK--G 266 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp-f-----~~Gd~-ILT~~DhEHnSVl~~~~~Ak---rk--G 266 (872)
..+.=+++++++...-+ .+.|+.++|+|+........ + ++++. |++...--|.+...-..... .+ +
T Consensus 100 ~~~lae~L~~~~p~~~~--~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~ 177 (460)
T PRK12403 100 VIELSELLFSLLPGHYS--HAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMG 177 (460)
T ss_pred HHHHHHHHHHhCCCCcC--EEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccC
Confidence 34455667777764322 59999999998776544321 1 12333 44433322444332211100 00 0
Q ss_pred ---cEEEEEeccCC-C--Ccc--------CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHH
Q 002866 267 ---AKVYSAWFKWP-T--LKL--------CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQ 327 (872)
Q Consensus 267 ---aeV~~Vpvd~p-~--g~I--------d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Ar 327 (872)
-.+..+|.... . ..+ +.+++++.+... ...+...|.+--+...-|.+.| ++.+ +.|+
T Consensus 178 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~----~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~ 253 (460)
T PRK12403 178 GLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL----GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICR 253 (460)
T ss_pred CCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh----CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 01223331100 0 001 124455544321 1124666777777777899988 6644 5679
Q ss_pred HCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 328 QNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 328 e~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++|+++++|=+|. .|.. +.-.+.-.+.||+++ +=|.+|+.=.-+|++++++++.+.+.
T Consensus 254 ~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~~Piga~v~~~~i~~~~~ 314 (460)
T PRK12403 254 QYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGYVPMGGLVLSKRIAEALV 314 (460)
T ss_pred HcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--EcccccccccceEEEEECHHHHHHHh
Confidence 9999999999984 3220 111122234689987 56866630001678888877665553
No 336
>PRK07046 aminotransferase; Validated
Probab=95.02 E-value=0.55 Score=54.72 Aligned_cols=203 Identities=8% Similarity=-0.005 Sum_probs=109.9
Q ss_pred CCceecccCCC-CC-----CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF-GL-----FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt-gp-----~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|+|+.+. ++ -.+.+.+++.+ .+ ... ..++-++ ....+.-++|.+.+++ + .|.|
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~-------q~-~~~---~~~~~~~--~~~~~lAe~l~~~~~~--~--~v~F 135 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAE-------QA-RRG---LTTMLPS--EDAAWVGEELARRFGL--P--YWQV 135 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHH-------HH-HhC---CCCCCCC--HHHHHHHHHHHHHhCC--C--EEEE
Confidence 45789997533 22 33666666533 11 111 1233333 2333455566677653 2 5999
Q ss_pred eCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHH------HHc---Cc------EEEEEeccCCCCccCHHH
Q 002866 222 TVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSA------KEK---GA------KVYSAWFKWPTLKLCSTD 285 (872)
Q Consensus 222 TsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~A------krk---Ga------eV~~Vpvd~p~g~Id~ed 285 (872)
+.++|||......- ..+...++|+.....-|....+..-.. .+. |. .+..+ .++ +.+.
T Consensus 136 ~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~n----d~~~ 209 (453)
T PRK07046 136 ATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVV--EFN----DLAA 209 (453)
T ss_pred ECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEee--CCC----CHHH
Confidence 99999987654332 223223446554332344321111100 000 11 11222 221 5677
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccchhcH----HHH-HHHHHCCcEEEeecccc----CCCCCccCCCCCCCCc
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY----QWM-ALAQQNHWHVLLDAGSL----GPKDMDSLGLSLFRPD 356 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL----e~I-~~Are~G~~VLVDAAQ~----aG~~mipLDLs~l~~D 356 (872)
+++++.. .+...|.+--+....|.+.|- +.+ +.|+++|+++++|=+|. .|.. ...-.+.||
T Consensus 210 l~~~l~~-------~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~---~~~~gv~PD 279 (453)
T PRK07046 210 LEAALAD-------GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGY---TRAHGLEPD 279 (453)
T ss_pred HHHHhCC-------CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcch---hHHhCCCcc
Confidence 7777731 246666666666667888873 433 46789999999999984 2221 111234699
Q ss_pred EEEEcccccCCCC-CCceEEEEEeCCCccccc
Q 002866 357 FIITSFYRVFGFD-PTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 357 Flv~S~HK~fG~~-PtGvG~LyVRk~~i~~L~ 387 (872)
.+++ =|.+|+. | +|++..|+++++.+.
T Consensus 280 i~t~--gK~lggG~P--i~av~g~~~i~~~~~ 307 (453)
T PRK07046 280 FLVV--GKPIAGGVP--CAVYGFSAELAERAQ 307 (453)
T ss_pred ceee--hhhhcCCCc--ceeeeehHHHHHHHh
Confidence 9875 6765531 3 788888888776554
No 337
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=95.01 E-value=1 Score=51.90 Aligned_cols=222 Identities=8% Similarity=-0.039 Sum_probs=105.2
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCc-CCCchHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALY-GGAEKGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~y-gNpsS~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++.-|||..+. +--.+.+.+++.+. + ..+. +... ..++ +...+.=+++++++.-... ..|.
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q-------l-~~l~-~~~~~~~~~--~~~~~la~~l~~~~p~~~~-~~v~ 105 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQ-------L-DRFT-HTCHQVVPY--ENYVRLAERLNALVPGDFA-KKTI 105 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHH-------H-hhcc-CcccCccCC--HHHHHHHHHHHHhCCCCCC-CEEE
Confidence 34789997544 34456677765331 1 1111 1111 1111 2233344556666642211 1699
Q ss_pred EeCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHH-----HHHcCc-----EEEEEeccCCCCccC----HHH
Q 002866 221 FTVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQS-----AKEKGA-----KVYSAWFKWPTLKLC----STD 285 (872)
Q Consensus 221 FTsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~-----AkrkGa-----eV~~Vpvd~p~g~Id----~ed 285 (872)
|+.++|||+.....- ..+....+|++....-|......... ..+.+. .+..+|+....-.++ .++
T Consensus 106 f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 185 (425)
T PRK07495 106 FVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAA 185 (425)
T ss_pred ECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHH
Confidence 999999976654331 11222345665433224432221111 011111 244555532111112 334
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccchh-cHH---H-HHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKY-SYQ---W-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDF 357 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~-PLe---~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DF 357 (872)
+++.+.... ...+...|.+.-+...+|.+. |-+ . .+.|+++|+++++|=+|. .|.. +...+.....||+
T Consensus 186 l~~~~~~~~---~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi 262 (425)
T PRK07495 186 LDKLFKADV---DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADL 262 (425)
T ss_pred HHHHHHhcc---CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCE
Confidence 455553210 112344444444444488664 433 2 356789999999999975 2221 0012222345776
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 358 IITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 358 lv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
+++ =|.+|+ -.=+|++..++++.+.+.
T Consensus 263 ~tl--sK~l~~-G~pigav~~~~~i~~~~~ 289 (425)
T PRK07495 263 TTM--AKGLAG-GFPLAAVTGRAEIMDAPG 289 (425)
T ss_pred Eee--hhhhcC-CccceEEEEcHHHHhccC
Confidence 555 576552 011788888877765554
No 338
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=95.00 E-value=0.34 Score=55.73 Aligned_cols=211 Identities=12% Similarity=0.124 Sum_probs=119.5
Q ss_pred CceecccCC-CC-----CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCG-FG-----LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAA-tg-----p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+.-|||..+ .+ -..+.+++++.+. ...+. .+ ...|.|+. ..+.=++++++.+ ..+ .|.|+
T Consensus 41 G~~YlDf~~Giav~~lGH~hP~iv~al~~Q----~~kl~-h~--sn~~~~~~----~~~la~~L~~~s~-~~d--~vff~ 106 (404)
T COG4992 41 GREYLDFAAGIAVNNLGHCHPALVEALKEQ----AEKLW-HV--SNLFYNEP----QAELAEKLVELSP-FAD--RVFFC 106 (404)
T ss_pred CCEeeeeccceeeeccCCCCHHHHHHHHHH----HHHhh-hc--ccccCChH----HHHHHHHHHhhCc-ccc--EEEEc
Confidence 378999433 32 2456677765331 11111 11 12344443 3345556666665 223 59999
Q ss_pred CCHHHHHHHHHh---hCCCCC-CCeEEEecccCchhHHHHH----HHHHHcCc-----EEEEEeccCCCCccCHHHHHHH
Q 002866 223 VSRGSAFKLLAE---SYPFHT-NKKLLTMFDYESQSVNWMA----QSAKEKGA-----KVYSAWFKWPTLKLCSTDLRKQ 289 (872)
Q Consensus 223 snATeALnLVae---slpf~~-Gd~ILT~~DhEHnSVl~~~----~~AkrkGa-----eV~~Vpvd~p~g~Id~edLe~~ 289 (872)
.++|||+...+. -+...+ ..+||+....-|.-.+... +-.-+++. .+..+|++ |.+.++++
T Consensus 107 NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn------Di~al~~a 180 (404)
T COG4992 107 NSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN------DIEALEAA 180 (404)
T ss_pred CCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC------CHHHHHHH
Confidence 999998776443 232212 2356655332232111100 11111222 24455543 56888888
Q ss_pred HhhhhccCCCCCceEEEEeCccCcccchhcHH-HH---H-HHHHCCcEEEeeccccC-CCC--CccCCCCCCCCcEEEEc
Q 002866 290 ISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WM---A-LAQQNHWHVLLDAGSLG-PKD--MDSLGLSLFRPDFIITS 361 (872)
Q Consensus 290 I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I---~-~Are~G~~VLVDAAQ~a-G~~--mipLDLs~l~~DFlv~S 361 (872)
|.. .|.-|.+--+.-+-|++.|-. -+ + +|.++|+++++|=+|.+ |.. +.-..-....||.++.
T Consensus 181 i~~--------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tl- 251 (404)
T COG4992 181 IDE--------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTL- 251 (404)
T ss_pred hcc--------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEe-
Confidence 864 588999999999999999864 23 3 46789999999999964 210 1112223457898775
Q ss_pred ccccCCCCCCceEEEEEeCCCcccccCCC
Q 002866 362 FYRVFGFDPTGFGCLLIKKSVMGSLQNQS 390 (872)
Q Consensus 362 ~HK~fG~~PtGvG~LyVRk~~i~~L~P~~ 390 (872)
-|-+|+. .=+|+++.++.....+.|-.
T Consensus 252 -aK~LgGG-~PigA~la~~~~~~~~~~G~ 278 (404)
T COG4992 252 -AKALGGG-FPIGAMLATEEIASAFTPGD 278 (404)
T ss_pred -eccccCC-ccceeeEEchhhhhcCCCCc
Confidence 4765541 23899999866566666543
No 339
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=94.98 E-value=1.5 Score=51.35 Aligned_cols=220 Identities=10% Similarity=0.026 Sum_probs=117.2
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++..|||..+. +-..+.|++++.+. +..+. ..+..+.. .+...+.=+++.+++-.+ ....+.|
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q----~~~~~---h~~~~~~~---~e~~v~~ae~L~~~~p~~-~~~~~~f 122 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQ----LAKLN---HTHTRDLY---YEPYVELAEKLTALAPGS-GLKKVFF 122 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHH----HHHhh---cccCCccc---chhHHHHHHHHHHhCCcc-cCCeEEe
Confidence 35789998872 33567788875431 11111 01111211 122233334555555443 1225889
Q ss_pred eCCHHHHHHHHHhhCCCCCC-CeEEEecccCchhHHHHHHH-----HHHcC-----cEEEEEeccCCCC-----------
Q 002866 222 TVSRGSAFKLLAESYPFHTN-KKLLTMFDYESQSVNWMAQS-----AKEKG-----AKVYSAWFKWPTL----------- 279 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~G-d~ILT~~DhEHnSVl~~~~~-----AkrkG-----aeV~~Vpvd~p~g----------- 279 (872)
+.++|+|+...+.--.+..| ..||+-..--|.....-..+ ..+.| ..|..+|...+-.
T Consensus 123 ~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~ 202 (447)
T COG0160 123 GNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECG 202 (447)
T ss_pred cCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhh
Confidence 99999998876553222233 34554332124433222111 11111 2366676543211
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HH----HHHHHCCcEEEeeccccC----CCCCccCCC
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WM----ALAQQNHWHVLLDAGSLG----PKDMDSLGL 350 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I----~~Are~G~~VLVDAAQ~a----G~~mipLDL 350 (872)
.-..+.++.+|.... ....+...|.+--+..+-|.+.|=+ ++ ++|+++|+.+++|=+|.+ |+ |.-+.-
T Consensus 203 ~~~~~~~e~~i~~~~--~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~-~fa~E~ 279 (447)
T COG0160 203 DDALEYIERALFDLE--VGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGK-MFAFEH 279 (447)
T ss_pred HHHHHHHHHHHHhhc--CCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-chhhhh
Confidence 011222344343211 1223466777777888899988854 55 356899999999999964 33 333333
Q ss_pred CCCCCcEEEEcccccCCCCCCceEEEEEeCCCcc
Q 002866 351 SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~ 384 (872)
....||.++++ |-+|+ =.=+|+++.|+++..
T Consensus 280 ~gv~PDivt~a--K~ig~-G~Pl~avv~r~ei~~ 310 (447)
T COG0160 280 FGVEPDIVTLA--KSLGG-GLPLSAVVGRAEIMD 310 (447)
T ss_pred cCCCCCEEEec--ccccC-CCceeEEeccHHhcc
Confidence 34469999876 65442 122888999999876
No 340
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=94.96 E-value=0.31 Score=58.53 Aligned_cols=170 Identities=15% Similarity=0.159 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH----HHHHHhhCCCCCCCe-----EEEecccCchhHHHHHHHHHHcCc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA----FKLLAESYPFHTNKK-----LLTMFDYESQSVNWMAQSAKEKGA 267 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeA----LnLVaeslpf~~Gd~-----ILT~~DhEHnSVl~~~~~AkrkGa 267 (872)
+++.+.-+-+..+.|-+ .+-|-+|...+ =-.++++|.-++|.. ++-...|.-| + ..|.-.|.
T Consensus 582 ~lf~~Le~~Lc~iTG~D----~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTN---P--ASA~Magm 652 (1001)
T KOG2040|consen 582 QLFTELEKDLCEITGFD----SFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTN---P--ASAAMAGM 652 (1001)
T ss_pred HHHHHHHHHhheeeccc----ceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCC---h--hhHHhcCC
Confidence 46666677777777764 37788776542 224566765555542 3434444433 1 12344699
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc-HH-HHHHHHHCCcEEEeecccc---CC
Q 002866 268 KVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS-YQ-WMALAQQNHWHVLLDAGSL---GP 342 (872)
Q Consensus 268 eV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P-Le-~I~~Are~G~~VLVDAAQ~---aG 342 (872)
+|..|.++. +|.|+..+|+.+..+++. .-..-+|.+|. ..|+.-| |+ ++..+|++|-.|-+|+|-. +|
T Consensus 653 kvvpV~~~~-~G~id~~dLk~kaekh~~---~Laa~MvTYPS---T~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVG 725 (1001)
T KOG2040|consen 653 KVVPVGCDA-NGNIDMVDLKAKAEKHKD---NLAALMVTYPS---THGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVG 725 (1001)
T ss_pred EEEEeeccC-CCCccHHHHHHHHHHhhh---hhheeEEeccc---ccccccccHHHHHHHHHhcCCEEEecCCCccceec
Confidence 999999887 589999999988765421 11233444443 2455444 54 6778899999999999942 33
Q ss_pred CCCccCCCCCCCCcEEEEcccccCCCCC-----CceEEEEEeCCCccccc
Q 002866 343 KDMDSLGLSLFRPDFIITSFYRVFGFDP-----TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 343 ~~mipLDLs~l~~DFlv~S~HK~fG~~P-----tGvG~LyVRk~~i~~L~ 387 (872)
. -.--+++.|.--...||.|+. | .|+|=+-||+-+.+.|.
T Consensus 726 l----c~pGd~GaDV~HLNLHKTFcI-PHGGGGPg~gPIgVK~HLapfLP 770 (1001)
T KOG2040|consen 726 L----CRPGDIGADVCHLNLHKTFCI-PHGGGGPGMGPIGVKKHLAPFLP 770 (1001)
T ss_pred c----cCCccccccceeecccceeee-cCCCCCCCCCccchhhhccccCC
Confidence 2 122457899999999998654 3 26777888887777664
No 341
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=94.84 E-value=1.3 Score=51.45 Aligned_cols=179 Identities=9% Similarity=0.044 Sum_probs=93.7
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHHH-----HcC-----cE
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSAK-----EKG-----AK 268 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~Ak-----rkG-----ae 268 (872)
.+.-+++++++..... ..|.|+.++|||+.....- ..+....+||+....-|....+...... +.+ ..
T Consensus 88 ~~lae~L~~~~p~~~~-~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~ 166 (445)
T PRK08593 88 VRLAKKLCELAPGDFE-KRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPG 166 (445)
T ss_pred HHHHHHHHHhCCCCCC-CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCC
Confidence 4455567777643211 2699999999987764442 1122223466543322444332221110 110 11
Q ss_pred EEEEeccCCC----CccCH-------HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcE
Q 002866 269 VYSAWFKWPT----LKLCS-------TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWH 332 (872)
Q Consensus 269 V~~Vpvd~p~----g~Id~-------edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~ 332 (872)
+..+|..... ...+. +++++++..+ ....++..|.+--+....|.+.| ++.+ +.|+++|+.
T Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~l 243 (445)
T PRK08593 167 FVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKY---LPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGIL 243 (445)
T ss_pred cEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhh---cCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 3334432110 00111 2233333211 01135777777778788899877 5543 567999999
Q ss_pred EEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 333 VLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 333 VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
+++|=+|. .|.. +.-.+.-...||++++ =|-+|. | +|++..++++++.+.
T Consensus 244 lI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~--gK~l~~---G~p~gav~~~~~i~~~~~ 298 (445)
T PRK08593 244 FAVDDIQQGLGRTGKWSSISHFNITPDLMSF--GKSLAG---GMPMSAIVGRKEIMESLE 298 (445)
T ss_pred EEEechhhCCCcCchHHHHHhcCCCCCEeee--cccccC---CcccEEEEEcHHHHhhhc
Confidence 99999973 3321 0001222346897754 576553 3 788999988776664
No 342
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=94.68 E-value=1.5 Score=50.25 Aligned_cols=222 Identities=11% Similarity=0.013 Sum_probs=112.6
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcC-CCchHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYG-GAEKGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg-NpsS~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++.-|||..+. +--.+.+++++.+. + ..+. +..+. .++ ....+.-+++++++... ....|.
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q-------l-~~~~-~~~~~~~~~--~~~~~la~~l~~~~p~~-~~~~v~ 98 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQ-------V-AEFT-HTCFMVTPY--EGYVALAEKLNRIAPGS-GPKKSV 98 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHH-------H-Hhcc-CccccccCC--hHHHHHHHHHHHhCCCC-CCCEEE
Confidence 44779997544 34456777765431 1 1111 11111 122 22234444566666321 112699
Q ss_pred EeCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHH-----HHcCc-----EEEEEeccCCCC------cc--
Q 002866 221 FTVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSA-----KEKGA-----KVYSAWFKWPTL------KL-- 281 (872)
Q Consensus 221 FTsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~A-----krkGa-----eV~~Vpvd~p~g------~I-- 281 (872)
|+.++|||+.....- ..+....+|++....-|....+..... .+.|. .+..+|+..+.. ..
T Consensus 99 f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (420)
T TIGR00700 99 FFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLST 178 (420)
T ss_pred EeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhH
Confidence 999999986654331 122223446655432344443332211 11221 223333321000 01
Q ss_pred --CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCC
Q 002866 282 --CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLS 351 (872)
Q Consensus 282 --d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs 351 (872)
+.+.+++.+... ....+...|.+--+...+|.+.| ++. .+.|+++|+++++|=++. .+.. +..++-.
T Consensus 179 ~~~~~~~~~~~~~~---~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~ 255 (420)
T TIGR00700 179 DGELAAARAIFVID---VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHE 255 (420)
T ss_pred HHHHHHHHHHHHhh---cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhc
Confidence 133455554311 01235777777777788999888 443 456799999999999864 2221 1112222
Q ss_pred CCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 352 LFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 352 ~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
...||.++ +=|.+++ =-=+|++++++++++.+.
T Consensus 256 ~~~pDi~~--lsK~l~~-G~pig~v~~~~~i~~~~~ 288 (420)
T TIGR00700 256 GPEPDLIT--TAKSLAD-GLPLSGVTGRAEIMDAPA 288 (420)
T ss_pred CCCCCEEE--eeccccC-CcceEEEEecHHHHhhcC
Confidence 34688665 5686652 112788888877765543
No 343
>PRK07480 putative aminotransferase; Validated
Probab=94.48 E-value=1.1 Score=52.42 Aligned_cols=81 Identities=11% Similarity=0.080 Sum_probs=54.2
Q ss_pred CceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCc
Q 002866 301 AAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTG 372 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtG 372 (872)
+...|.+--+....|.+.| ++.+ ++|+++|+++++|=+|. .|.. +.-.+.-...||.+++ =|-+|+ |
T Consensus 219 ~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~g---G 293 (456)
T PRK07480 219 NVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTI--AKGLTS---G 293 (456)
T ss_pred cEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeee--ehhhcc---C
Confidence 4666666666666888887 4434 46789999999999974 3321 1122233457998776 576553 4
Q ss_pred ---eEEEEEeCCCcccc
Q 002866 373 ---FGCLLIKKSVMGSL 386 (872)
Q Consensus 373 ---vG~LyVRk~~i~~L 386 (872)
+|++++++++.+.+
T Consensus 294 ~~Pi~av~~~~~i~~~~ 310 (456)
T PRK07480 294 YIPMGAVGVGDRVAEVL 310 (456)
T ss_pred CccceEEEEcHHHHHHH
Confidence 79999998877665
No 344
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=94.28 E-value=1.4 Score=50.47 Aligned_cols=98 Identities=11% Similarity=0.118 Sum_probs=59.5
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeeccccC-CCC--CccCCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSLG-PKD--MDSLGLSLFRP 355 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~a-G~~--mipLDLs~l~~ 355 (872)
++|++++.... ...+...|.+.-+....|.+.| ++ +++.|+++|+++++|=++.. +.. +..++.....+
T Consensus 185 ~~l~~~l~~~~---~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~p 261 (425)
T PRK08088 185 ASIERIFKNDA---APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAA 261 (425)
T ss_pred HHHHHHHHhcc---CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCC
Confidence 45666664210 1124566666666666677776 44 45678999999999998652 221 11222333456
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 356 DFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
| +.|+=|.+++ =.-+|++..++++++.+.
T Consensus 262 d--i~s~sK~l~~-G~rig~v~~~~~~~~~~~ 290 (425)
T PRK08088 262 D--LTTFAKSIAG-GFPLAGVTGRAEVMDAIA 290 (425)
T ss_pred C--EEEEeccccC-CCcceeeEecHHHHhhcC
Confidence 7 4677898873 122788988877766554
No 345
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=94.28 E-value=0.15 Score=59.25 Aligned_cols=128 Identities=13% Similarity=0.007 Sum_probs=82.2
Q ss_pred EEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH
Q 002866 244 LLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM 323 (872)
Q Consensus 244 ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I 323 (872)
|+++.|--|.+|.. .+--.|++++.++.+. +..+..+.|+++|.++..+... .=+++.+....-+-..=+|+.+
T Consensus 184 V~Y~SDqahssvek---a~~i~~VklR~l~td~-n~~mr~~~L~~AIe~D~arGlI--Pf~v~at~GTT~~ca~D~l~el 257 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEK---ACLIAGVKLRALPTDE-NFGMRGDTLRKAIEEDIARGLI--PFFVCATLGTTSSCAFDELEEL 257 (511)
T ss_pred eEEecCcccchHHH---hHhhcceeEEEeeccc-CcCCCHHHHHHHHHHHHhCCCc--cEEEEEeecCccccccccHHHh
Confidence 44555666777753 3334589999999987 5778999999999876432211 1222333222223334446544
Q ss_pred -HHHHHCCcEEEeeccccCCCCCccCCCCC--------CCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 324 -ALAQQNHWHVLLDAGSLGPKDMDSLGLSL--------FRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 324 -~~Are~G~~VLVDAAQ~aG~~mipLDLs~--------l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
..|+++|+++|||||=++.. +-..+ -.+|-+-+..|||+-. -.-+-.||+|...
T Consensus 258 g~Vc~~~glWLHVDAAYAGsa----~iCpE~r~l~rGie~aDSfn~n~hK~~~v-nfDCs~lWvkd~~ 320 (511)
T KOG0628|consen 258 GPVCREEGLWLHVDAAYAGSA----FICPEFRYLMRGIEYADSFNFNPHKWLLV-NFDCSPLWVKDGT 320 (511)
T ss_pred cchhhhcCEEEEeehhhcccc----ccCHHHHHHhhcchhhccccCChhheeEE-eeeeecceeecCc
Confidence 57799999999999943221 11111 2479999999999765 3567889998863
No 346
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=94.22 E-value=0.27 Score=54.71 Aligned_cols=98 Identities=17% Similarity=0.301 Sum_probs=73.3
Q ss_pred CCCceEEEEeCccCcccchhcHHHH----HHHHHCCcEEEeeccccCCCCCccCCCCCC----CCc-EEEEcccccCCCC
Q 002866 299 DSAAGLFVFPVQSRVTGAKYSYQWM----ALAQQNHWHVLLDAGSLGPKDMDSLGLSLF----RPD-FIITSFYRVFGFD 369 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~PLe~I----~~Are~G~~VLVDAAQ~aG~~mipLDLs~l----~~D-Flv~S~HK~fG~~ 369 (872)
...+++++|+--.|.||.++-=+++ +.|+++|+.+++|-|=.+|.. -+.+++. +.. .+++|.-|. |-|
T Consensus 177 ~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP--~iifsd~~~~w~~NiilC~SLSK~-GLP 253 (417)
T COG3977 177 GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFP--GIIFSDATPLWNENIILCMSLSKL-GLP 253 (417)
T ss_pred ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCC--ceecccccccCCCCEEEEeehhhc-CCC
Confidence 3579999999999999999877654 346899999999999777752 3445543 333 578899996 432
Q ss_pred CCceEEEEEeCCCcccccCCCCCCCCCeEEEeeCC
Q 002866 370 PTGFGCLLIKKSVMGSLQNQSGQTGSGMVKITPEY 404 (872)
Q Consensus 370 PtGvG~LyVRk~~i~~L~P~~~~~GgGtV~~vP~~ 404 (872)
-.-+|+.+....++..+..-. |++++.|+.
T Consensus 254 G~R~GIiIane~viqaitnmn-----~iisLap~~ 283 (417)
T COG3977 254 GSRCGIIIANEKVIQAITNMN-----GIISLAPGR 283 (417)
T ss_pred CcceeEEEccHHHHHHHHhcc-----ceeeecCCC
Confidence 345899999998888877543 778887764
No 347
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=94.04 E-value=0.95 Score=51.97 Aligned_cols=94 Identities=14% Similarity=0.152 Sum_probs=52.1
Q ss_pred CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeecccc-CCCCCcc-CC--CCC
Q 002866 282 CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSL-GPKDMDS-LG--LSL 352 (872)
Q Consensus 282 d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~-aG~~mip-LD--Ls~ 352 (872)
+.+.+++++.. .+...|.+.-+....|.+.| ++ +.+.|+++|+++++|=++. .|.. -. +- ...
T Consensus 175 d~~~l~~~~~~-------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~-G~~~a~~~~~ 246 (408)
T PRK04612 175 DVEALEAAMAG-------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRT-GTLFAHWQEQ 246 (408)
T ss_pred CHHHHHHhhCC-------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-CchhhhhhcC
Confidence 46777776642 13455555444444455553 23 3356789999999999975 3221 11 11 112
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 353 FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
..||++++ =|.+|+. -=+|+++.+++..+.+
T Consensus 247 ~~pdi~t~--~K~l~~G-~piga~~~~~~~~~~~ 277 (408)
T PRK04612 247 VTPDIVTL--AKALGGG-FPIGAMLAGPKVAETM 277 (408)
T ss_pred CCCCEEEE--cchhcCC-CceEEEEECHHHHhhh
Confidence 34565554 6876630 1178887777655444
No 348
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=94.02 E-value=0.72 Score=52.93 Aligned_cols=133 Identities=13% Similarity=0.137 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHhcC------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEec-ccCchhHHHHHHHHHHcCcE
Q 002866 196 GTVEHDIKTRIMDHLN------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMF-DYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 196 ~~~ieeARerIA~lLg------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~-DhEHnSVl~~~~~AkrkGae 268 (872)
++-+.-+|+.||+|+- |+|+ +|.+|.||+.|++.+..-+--.+.+-|+++- -|+ + .-+..+.-.|..
T Consensus 112 SqGv~~vR~~VA~~I~rRDG~p~~p~--dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYP---L-YsAti~l~~~~~ 185 (475)
T KOG0258|consen 112 SQGVPGVRKHVAEFIERRDGIPADPE--DIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYP---L-YSATISLLGGTQ 185 (475)
T ss_pred ccCChhHHHHHHHHHHhccCCCCCHH--HeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCc---h-hHHHHHHhCCcc
Confidence 4567789999999985 4454 5999999999999888766444555566542 232 1 111222222333
Q ss_pred EE-EEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeecc
Q 002866 269 VY-SAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAG 338 (872)
Q Consensus 269 V~-~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAA 338 (872)
|- ++.... +..++.++|++.+...+ +.-+.++.++----|.||+.+.-+ ++.-|++.|+.+|-|-+
T Consensus 186 v~YyLdEe~-~W~ld~~el~~~~~eA~---k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEV 256 (475)
T KOG0258|consen 186 VPYYLDEES-NWSLDVAELERSVDEAR---KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEV 256 (475)
T ss_pred cceeecccc-CCCCCHHHHHHHHHHHh---ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHH
Confidence 32 332221 23578999998887643 233455666656779999999865 45667899999999987
No 349
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=94.00 E-value=1.5 Score=51.18 Aligned_cols=209 Identities=14% Similarity=0.148 Sum_probs=103.3
Q ss_pred CCceecccCCC-----CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCC-chHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF-----GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGA-EKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt-----gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNp-sS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||.++. +.-.+.+++++.+. + ..+ .+... ...+...+.-+++++++....+ .|.|
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~q-------l-~~~----~~~~~~~~~~~~~~lae~L~~~~p~~~~--~v~f 135 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQ-------M-AKL----PFSPRRFTNETAIECAEKLTEIAGGELN--RVLF 135 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHH-------H-HhC----CCccCccCCHHHHHHHHHHHHhCCCCCC--EEEE
Confidence 45779997643 33456777765431 1 111 11111 0123344555667777753222 6999
Q ss_pred eCCHHHHHHHHHhh-CCCCCCCeEEEecc-cCchhHHHHHHHH----HHcC-----cEEEEEeccC----CCCcc-----
Q 002866 222 TVSRGSAFKLLAES-YPFHTNKKLLTMFD-YESQSVNWMAQSA----KEKG-----AKVYSAWFKW----PTLKL----- 281 (872)
Q Consensus 222 TsnATeALnLVaes-lpf~~Gd~ILT~~D-hEHnSVl~~~~~A----krkG-----aeV~~Vpvd~----p~g~I----- 281 (872)
+.++++|+..+..- ..+....+||+... |++.+...+. .. .+.+ ..+..+|... +....
T Consensus 136 ~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (459)
T PRK06082 136 APGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAIS-VGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDV 214 (459)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHh-hcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHH
Confidence 99999986654331 11222345666544 4333322221 11 0011 0122233110 00000
Q ss_pred -CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc---HHHH-HHHHHCCcEEEeeccccC-CCC--CccCCCCCC
Q 002866 282 -CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQWM-ALAQQNHWHVLLDAGSLG-PKD--MDSLGLSLF 353 (872)
Q Consensus 282 -d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le~I-~~Are~G~~VLVDAAQ~a-G~~--mipLDLs~l 353 (872)
+.+.+++.|.. ..+...|.+--+.+..+...| ++.+ +.|+++|+++++|=+|.+ |.. +.-...-..
T Consensus 215 ~~~~~l~~~i~~------~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv 288 (459)
T PRK06082 215 HYADYLEYVIEK------EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI 288 (459)
T ss_pred HHHHHHHHHHhc------CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC
Confidence 12345555542 124566666556555344555 3434 467899999999999763 221 001112234
Q ss_pred CCcEEEEcccccCCCCCCc---eEEEEEeCCC
Q 002866 354 RPDFIITSFYRVFGFDPTG---FGCLLIKKSV 382 (872)
Q Consensus 354 ~~DFlv~S~HK~fG~~PtG---vG~LyVRk~~ 382 (872)
.||+++ +=|.+|+ | +|++++++++
T Consensus 289 ~PDiv~--~gKgl~g---G~~P~~av~~~~~i 315 (459)
T PRK06082 289 EPDILC--IGKGLGG---GLVPIAAMITKDKY 315 (459)
T ss_pred CCCEEE--ecccccC---CCCcceEEEEcHHH
Confidence 699887 4676653 3 5777777654
No 350
>PLN00144 acetylornithine transaminase
Probab=93.87 E-value=0.87 Score=51.60 Aligned_cols=96 Identities=15% Similarity=0.107 Sum_probs=58.2
Q ss_pred CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeecccc-CCCC--CccCCCCCC
Q 002866 282 CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLF 353 (872)
Q Consensus 282 d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l 353 (872)
+++.|++.+.. .+...|.+.-+.|..|...| ++ ..+.|+++|+++++|=++. .|.. +.+.++..+
T Consensus 155 d~~~l~~~~~~-------~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~ 227 (382)
T PLN00144 155 NLEAARKLIQK-------GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV 227 (382)
T ss_pred CHHHHHHhcCC-------CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCC
Confidence 46777777632 13445555545666555443 23 2356799999999999965 3221 112234556
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 354 RPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 354 ~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.|| +.++=|.+++ =.-+|+++++++.++.+.
T Consensus 228 ~PD--i~t~sK~l~~-G~pig~v~~~~~~~~~~~ 258 (382)
T PLN00144 228 EPD--IMTLAKPLAG-GLPIGAVLVTEKVASAIN 258 (382)
T ss_pred CCC--EEEecccccC-CcceEEEEEcHHHHhccC
Confidence 799 5555687652 112888988888776654
No 351
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=93.49 E-value=0.23 Score=55.33 Aligned_cols=182 Identities=13% Similarity=0.105 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC------CCCC-CeEEEecccCchhHHHHHHH----HHHcC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP------FHTN-KKLLTMFDYESQSVNWMAQS----AKEKG 266 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp------f~~G-d~ILT~~DhEHnSVl~~~~~----AkrkG 266 (872)
...+.-+++.+.++-. -..|.|+.++|+|+...+.-.. -.++ .+|++....-|....+.... ..+.+
T Consensus 60 ~~~~la~~L~~~~p~~--~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~ 137 (339)
T PF00202_consen 60 EAAELAEKLAELFPGG--LDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKG 137 (339)
T ss_dssp HHHHHHHHHHHHSSTT--EEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTT
T ss_pred chhhhhhhhhhccccc--cceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcccccc
Confidence 3445666777777332 2369999999998765443211 1223 34665433224333222211 11111
Q ss_pred -----cEEEEEeccCCCC----ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH-HHH----HHHHHCCcE
Q 002866 267 -----AKVYSAWFKWPTL----KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY-QWM----ALAQQNHWH 332 (872)
Q Consensus 267 -----aeV~~Vpvd~p~g----~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL-e~I----~~Are~G~~ 332 (872)
..+..+|...+.. .-...++++.+.... ..+...|.+--+....|.+.|= +++ +.|+++|++
T Consensus 138 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gil 213 (339)
T PF00202_consen 138 FGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALN----ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGIL 213 (339)
T ss_dssp TCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-E
T ss_pred ccccccccccccCCccchhhhHHHHHHHHHHHHHhhc----CCcEEEEEEeccccccCccccccchhhehcccccccccc
Confidence 2346666543210 001112333333211 1245566666666667877763 233 467899999
Q ss_pred EEeeccccC-CCC--CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 333 VLLDAGSLG-PKD--MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 333 VLVDAAQ~a-G~~--mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+++|=+|.+ |.. +.-.+...+.||+++++ |.+++- .-+|++++++++.+.+.+
T Consensus 214 lI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG-~p~sav~~~~~i~~~~~~ 269 (339)
T PF00202_consen 214 LIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGG-LPISAVLGSEEIMEAFQP 269 (339)
T ss_dssp EEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTT-SSEEEEEEEHHHHTTSCT
T ss_pred eecccccccccccCCccceecccccCcccccc--cchhhh-hhcccccccchhhccccc
Confidence 999999864 221 11122334679999998 876541 338999999988776654
No 352
>PRK07678 aminotransferase; Validated
Probab=93.44 E-value=1.2 Score=51.85 Aligned_cols=83 Identities=11% Similarity=0.061 Sum_probs=53.0
Q ss_pred CceEEEEeCccCcccchhcH----HHH-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCC--C
Q 002866 301 AAGLFVFPVQSRVTGAKYSY----QWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFD--P 370 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PL----e~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~--P 370 (872)
+..-|.+--+....|.+.|- +.+ +.|+++|+++++|=+|. .|.. +.-..--...||++++ =|-+|+. |
T Consensus 213 ~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~--gK~lggG~~P 290 (451)
T PRK07678 213 TIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITM--AKGITSAYLP 290 (451)
T ss_pred ceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEe--ecccccCCcc
Confidence 45566665555667888773 333 45789999999999984 3321 1011112346999877 5765530 2
Q ss_pred CceEEEEEeCCCccccc
Q 002866 371 TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 371 tGvG~LyVRk~~i~~L~ 387 (872)
+|++.+++++.+.+.
T Consensus 291 --i~av~~~~~i~~~~~ 305 (451)
T PRK07678 291 --LSATAVKKEIYEAFK 305 (451)
T ss_pred --eeEEEEcHHHHHHHh
Confidence 789999988776554
No 353
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=93.37 E-value=3.4 Score=47.56 Aligned_cols=222 Identities=9% Similarity=0.046 Sum_probs=108.9
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcC-CCchHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYG-GAEKGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg-NpsS~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++.-|||..+. +--.+.+.+++.+. ...+. +..+. .++ ...++-+ +++++++.... ...+.
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q--------l~~~~-~~~~~~~~~-~~~~~la-~~l~~~~p~~~-~~~~~ 105 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQ--------LDQFT-HTAYQIVPY-ASYVTLA-ERINALAPIDG-PAKTA 105 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHH--------Hhhcc-cccccccCC-hHHHHHH-HHHHHhCCCCC-CceEE
Confidence 45789997544 34456677765331 11111 11111 122 1233334 55667764321 12699
Q ss_pred EeCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHHH-----HcCc-----EEEEEeccCCC-C---ccCHHH
Q 002866 221 FTVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSAK-----EKGA-----KVYSAWFKWPT-L---KLCSTD 285 (872)
Q Consensus 221 FTsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~Ak-----rkGa-----eV~~Vpvd~p~-g---~Id~ed 285 (872)
|+.++|||+.....- ..+....+|++....-|....+...... +.+. .+..++..... + .-+.+.
T Consensus 106 f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 185 (421)
T PRK06777 106 FFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSS 185 (421)
T ss_pred EeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHH
Confidence 999999986654331 1222233466543322444333221110 0110 11222221100 0 012445
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccch-hcHH---H-HHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAK-YSYQ---W-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDF 357 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i-~PLe---~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DF 357 (872)
+++.+... ....+...|.+.-+.+..|.. .|-+ . .+.|+++|+++++|=++. .|.. +.....-...||.
T Consensus 186 l~~~~~~~---~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDi 262 (421)
T PRK06777 186 VERLFKAD---IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDL 262 (421)
T ss_pred HHHHHHhc---cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCE
Confidence 66666421 011246677777677778864 5533 2 356789999999999975 2221 1111222345896
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 358 IITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 358 lv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++ +=|.+|+ =.-+|+++.++++++.+.
T Consensus 263 v~--~sK~l~~-G~pigav~~~~~i~~~~~ 289 (421)
T PRK06777 263 IT--MAKSLGG-GMPISAVVGRAEVMDAPA 289 (421)
T ss_pred Ee--eehhhcC-CCceEEEEEcHHHHhccC
Confidence 64 6787663 012788888877765554
No 354
>PRK07036 hypothetical protein; Provisional
Probab=93.31 E-value=1.8 Score=50.63 Aligned_cols=83 Identities=12% Similarity=0.114 Sum_probs=56.3
Q ss_pred CCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC--CccCC-CCCCCCcEEEEcccccCCCCC
Q 002866 300 SAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLG-LSLFRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~--mipLD-Ls~l~~DFlv~S~HK~fG~~P 370 (872)
.+...|.+--+....|.+.| ++.+ +.|+++|+++++|=+|. .|.. +.-.. .-...||++++ =|.+|+
T Consensus 219 ~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~--gK~l~g-- 294 (466)
T PRK07036 219 DNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITF--AKGLTS-- 294 (466)
T ss_pred CceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEE--cccccc--
Confidence 35677777777777899888 5544 56799999999999974 3321 11111 12346998877 476664
Q ss_pred Cc---eEEEEEeCCCccccc
Q 002866 371 TG---FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 371 tG---vG~LyVRk~~i~~L~ 387 (872)
| +|++.+++++.+.+.
T Consensus 295 -G~~Pi~av~~~~~i~~~~~ 313 (466)
T PRK07036 295 -GYQPLGAVIISERLLDVIS 313 (466)
T ss_pred -CccccEEEEEcHHHHHHHh
Confidence 4 789999888776554
No 355
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=92.88 E-value=6.5 Score=46.37 Aligned_cols=53 Identities=6% Similarity=0.137 Sum_probs=37.2
Q ss_pred HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc
Q 002866 283 STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL 340 (872)
Q Consensus 283 ~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~ 340 (872)
.+.++++|... ..+..-|.+--+....|.+.| ++.+ +.|+++|+++++|=+|.
T Consensus 238 l~~l~~~l~~~-----~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t 295 (464)
T TIGR00699 238 LEEVEDLIKKW-----HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQT 295 (464)
T ss_pred HHHHHHHHHhc-----CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeee
Confidence 34456666431 124666667667777899998 6544 56799999999999985
No 356
>PRK07481 hypothetical protein; Provisional
Probab=92.81 E-value=2 Score=49.96 Aligned_cols=82 Identities=9% Similarity=0.113 Sum_probs=55.3
Q ss_pred CceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCc
Q 002866 301 AAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTG 372 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtG 372 (872)
+...|.+--+....|.+.| ++.+ +.|+++|+++++|=+|. .|.. +.-...-...||++++ =|.+|+ |
T Consensus 213 ~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~g---G 287 (449)
T PRK07481 213 TIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCL--AKGITS---G 287 (449)
T ss_pred cEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEE--eecccC---C
Confidence 5677777777777898877 3333 45789999999999975 3220 1112233457999887 476653 3
Q ss_pred ---eEEEEEeCCCccccc
Q 002866 373 ---FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 ---vG~LyVRk~~i~~L~ 387 (872)
+|++.+++++++.+.
T Consensus 288 ~~Pi~av~~~~~i~~~~~ 305 (449)
T PRK07481 288 YVPLGATMVNARIADAFE 305 (449)
T ss_pred CcCceEEEEcHHHHHHHh
Confidence 788999888766554
No 357
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=92.79 E-value=0.41 Score=53.17 Aligned_cols=144 Identities=14% Similarity=0.037 Sum_probs=91.3
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCC
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTL 279 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g 279 (872)
...-.+||+|=+- |..|+ -+++-.|..-+.+++ ..+.+-|++. +..|.|+.-=.+++++++
T Consensus 115 k~LE~kiAqfh~r---ED~il-ypscfdANag~feai-l~pedAvfSD-eLNhASIIdGirLckry~------------- 175 (417)
T KOG1359|consen 115 KLLESKIAQFHGR---EDTIL-YPSCFDANAGAFEAI-LTPEDAVFSD-ELNHASIIDGIRLCKRYR------------- 175 (417)
T ss_pred HHHHHHHHHHhCC---CceEE-eccccccchHHHHHh-cChhhhhhcc-ccccchhhhhhHHHhhhc-------------
Confidence 3455678887664 22344 444445555555554 3445556654 456788865556777653
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCC--------CCccCCC
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPK--------DMDSLGL 350 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~--------~mipLDL 350 (872)
.++.-+++..+.... .-+.+||+-..+-.+-|-+-|++. ..+++++|+++++|-+++-|. + ..+++
T Consensus 176 h~dv~~l~~~l~~a~----k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~-E~~~v 250 (417)
T KOG1359|consen 176 HVDVFDLEHCLISAC----KMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTA-EEFGV 250 (417)
T ss_pred cchhHHHHHHHHHhh----hheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChH-HHhCC
Confidence 245556665443221 235789999999999999999985 567899999999999986442 0 11222
Q ss_pred CCCCCcEEEEcccccCCC
Q 002866 351 SLFRPDFIITSFYRVFGF 368 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~ 368 (872)
. -++|.+....-|-+|+
T Consensus 251 m-~~vdiinsTLgKAlGg 267 (417)
T KOG1359|consen 251 M-GDVDIINSTLGKALGG 267 (417)
T ss_pred C-CcceehhhhhhhhhcC
Confidence 1 3577777777776664
No 358
>PRK05965 hypothetical protein; Provisional
Probab=92.42 E-value=2.3 Score=49.72 Aligned_cols=98 Identities=11% Similarity=0.133 Sum_probs=58.1
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH-HHH----HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY-QWM----ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRP 355 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL-e~I----~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~ 355 (872)
+.+++.|... ...+..-|.+--+....|.+.|- +.+ +.|+++|+++++|=+|. .|.. +.-.+.-...|
T Consensus 202 ~~l~~~i~~~----~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~P 277 (459)
T PRK05965 202 AALRAKVAEL----GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVP 277 (459)
T ss_pred HHHHHHHHhc----CCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCC
Confidence 4566666431 11245555555566677887764 333 35689999999999976 3320 11122233579
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 356 DFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
|.++++ |-+|+.=.=+|++.+++++.+.+.
T Consensus 278 Div~~g--Kgl~gG~~Pi~av~~~~~i~~~~~ 307 (459)
T PRK05965 278 DLMTVA--KGLTSGYVPMGAVLMSDHVYQGIA 307 (459)
T ss_pred CeEEec--hhhccCCcceeEEEEcHHHHHHHh
Confidence 999884 655530001788888888765543
No 359
>PRK06105 aminotransferase; Provisional
Probab=92.12 E-value=1.2 Score=51.90 Aligned_cols=95 Identities=12% Similarity=0.150 Sum_probs=60.1
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRP 355 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~ 355 (872)
++++++|... ...+...|.+--+...-|.+.| ++.+ +.|+++|+++++|=+|. .|.. +.-.+...+.|
T Consensus 205 ~~le~~~~~~----~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~P 280 (460)
T PRK06105 205 NELEALILAE----GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKP 280 (460)
T ss_pred HHHHHHHHHc----CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCC
Confidence 5566666421 1124567777667777898887 5544 46789999999999984 4320 11122334579
Q ss_pred cEEEEcccccCCCCCCc---eEEEEEeCCCccccc
Q 002866 356 DFIITSFYRVFGFDPTG---FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtG---vG~LyVRk~~i~~L~ 387 (872)
|++++ =|-+|+ | +|+++.++++.+.+.
T Consensus 281 Di~~~--gK~lgg---G~~P~~av~~~~~i~~~~~ 310 (460)
T PRK06105 281 DILVM--SKQLSS---SYQPLSAVLMNEKVYDPIA 310 (460)
T ss_pred Ceeee--eccccc---CcccceEEEEcHHHHHHHh
Confidence 98866 476553 3 788888877665544
No 360
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=91.97 E-value=3.5 Score=48.14 Aligned_cols=220 Identities=10% Similarity=0.054 Sum_probs=108.7
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||..+. +--.+.+.+++.+ .+ ..+.....++.++ ....+.-++++++++..-+ .|.|
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~-------ql-~~~~~~~~~~~~~--~~~~~lAe~L~~~~p~~~~--~v~f 119 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKD-------QL-DTLEHAMLAGCTH--EPAIELAERLAALTGGTLG--HAFF 119 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHH-------HH-HhcCCccccccCC--HHHHHHHHHHHHhCCCCCC--EEEE
Confidence 45789998644 4455677776433 11 1111000112222 2333455566676654322 5999
Q ss_pred eCCHHHHHHHHHhh---C---CCCCC-CeEEEecccCchhHHHHHHH----HHHcC-----cEEEEEeccCCCCc-----
Q 002866 222 TVSRGSAFKLLAES---Y---PFHTN-KKLLTMFDYESQSVNWMAQS----AKEKG-----AKVYSAWFKWPTLK----- 280 (872)
Q Consensus 222 TsnATeALnLVaes---l---pf~~G-d~ILT~~DhEHnSVl~~~~~----AkrkG-----aeV~~Vpvd~p~g~----- 280 (872)
+.++|+|+.....- + .=.+| .+||+....-|......... ..+.+ ..+..+|.......
T Consensus 120 ~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 199 (453)
T PRK06943 120 ASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGET 199 (453)
T ss_pred eCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCC
Confidence 99999975543331 1 00123 35665543224432211110 00111 01233433211000
Q ss_pred ------cCHHHHHHHHhhhhccCCCCCceEEEEeC-ccCcccchhcH-HH---H-HHHHHCCcEEEeecccc-CCCC--C
Q 002866 281 ------LCSTDLRKQISSKKRRKKDSAAGLFVFPV-QSRVTGAKYSY-QW---M-ALAQQNHWHVLLDAGSL-GPKD--M 345 (872)
Q Consensus 281 ------Id~edLe~~I~~~~rr~~~~~T~LVa~p~-vSNvTG~i~PL-e~---I-~~Are~G~~VLVDAAQ~-aG~~--m 345 (872)
-+.++++++|... ..+..-|.+-- +....|.+.|= +. + +.|+++|+++++|=+|. .|.. +
T Consensus 200 ~~~~~~~~~~~l~~~l~~~-----~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~ 274 (453)
T PRK06943 200 AADVAARALADVRRLFAER-----AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTF 274 (453)
T ss_pred HHHHHHHHHHHHHHHHHhC-----CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcch
Confidence 0235566666431 12455555555 35667887663 32 3 45789999999999975 3321 1
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
.-.+.-...||++++ =|.+|+.=.=+|++.+++++.+.+
T Consensus 275 fa~~~~gv~PDivt~--gKgl~gG~~Pi~av~~~~ei~~~~ 313 (453)
T PRK06943 275 FACEQAGVWPDFLCL--SKGISGGYLPLSLVLSRDAIFAAF 313 (453)
T ss_pred hHHHhCCCCCCeEee--ehhhccCcccceEEEEcHHHHHhh
Confidence 111222457999998 465443000178888888876544
No 361
>PRK07482 hypothetical protein; Provisional
Probab=91.90 E-value=3.4 Score=48.30 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=57.1
Q ss_pred HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH-HH---H-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCC
Q 002866 283 STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY-QW---M-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFR 354 (872)
Q Consensus 283 ~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL-e~---I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~ 354 (872)
.+.+++.+... ...+..-|.+--+....|.+.|- +. + ++|+++|+++++|=+|. .|.. +.-.+.-...
T Consensus 206 ~~~l~~~~~~~----~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~ 281 (461)
T PRK07482 206 ADELEELILAE----GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIE 281 (461)
T ss_pred HHHHHHHHHhc----CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCC
Confidence 45566666421 11245556665566667888663 22 3 45789999999999975 3320 1112223457
Q ss_pred CcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 355 PDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
||++++ =|.+|+.=.-+|++++++++.+.+
T Consensus 282 PDiv~~--gKgl~gG~~Pi~av~~~~~i~~~~ 311 (461)
T PRK07482 282 PDLITV--AKGLTSAYAPLSGSIVGEKVWDVL 311 (461)
T ss_pred CCEEEE--ccccccCccccceeeecHHHHHHH
Confidence 999997 476653000157777777765444
No 362
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=91.43 E-value=3.9 Score=47.26 Aligned_cols=166 Identities=10% Similarity=0.016 Sum_probs=80.7
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|+|..+. +--.+.+.+++.+ -...+ ..+.++.. ...+.-++|++++... + .|.|
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~--------q~~~~---~~~~~~~~--~~~~la~~l~~~~p~~-~--~v~f 109 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVRE--------ALQDG---CNFTRPSA--IELDAAESFLELIDGA-D--MVKF 109 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHH--------HHHhC---cCCCCCCH--HHHHHHHHHHHhCCcc-c--eEEE
Confidence 44779998543 2334667776533 11121 12444432 2224455677776421 2 5999
Q ss_pred eCCHHHHHHHHHhh-CCCCCCC-eEEEecccC-chhHHHHHHH--HHHcCc----EEEEEeccCCCCccCHHHHHHHHhh
Q 002866 222 TVSRGSAFKLLAES-YPFHTNK-KLLTMFDYE-SQSVNWMAQS--AKEKGA----KVYSAWFKWPTLKLCSTDLRKQISS 292 (872)
Q Consensus 222 TsnATeALnLVaes-lpf~~Gd-~ILT~~DhE-HnSVl~~~~~--AkrkGa----eV~~Vpvd~p~g~Id~edLe~~I~~ 292 (872)
+.++|||+.....- ..+ .|+ .|++...|. |. ...|..- ....|. ......+..+ +.++|+++|..
T Consensus 110 ~~sGseA~e~AlklAr~~-tgr~~i~~~~~~~~h~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----d~~~l~~~l~~ 183 (431)
T PRK06209 110 CKNGSDATSAAVRLARAY-TGRDLVARCADHPFFS-TDDWFIGTTPMSAGIPASVSALTVTFRYN----DIASLEALFED 183 (431)
T ss_pred ecCHHHHHHHHHHHHHHH-hCCCeEEEeccCcccc-ccccccccCCCCCCCChhHhccccccCCC----CHHHHHHHHHh
Confidence 99999986654431 112 244 354431111 11 0000000 000010 0001122221 57888888853
Q ss_pred hhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeecccc
Q 002866 293 KKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSL 340 (872)
Q Consensus 293 ~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~ 340 (872)
. ..+...|.+-.+..+.+..-+++. .+.|+++|+++++|-+|.
T Consensus 184 ~-----~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t 227 (431)
T PRK06209 184 H-----PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT 227 (431)
T ss_pred C-----CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 2 123556666554333333333554 456799999999999983
No 363
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=91.37 E-value=3.4 Score=47.89 Aligned_cols=220 Identities=9% Similarity=0.054 Sum_probs=103.9
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcC-CCchHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYG-GAEKGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg-NpsS~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++..|||..+. +--.+.+.+++.+ -...+. +..++ ..+ +...+.-+++++++..+-+ .|.
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~--------q~~~~~-~~~~~~~~~--~~~~~la~~L~~~~p~~~~--~v~ 107 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKS--------QIDAMS-HVMFGGITH--PPAIELCRKLVAMTPQPLE--CVF 107 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHH--------HHhhcC-CccccccCC--HHHHHHHHHHHhhCCCCcC--EEE
Confidence 45789997653 3344667776533 111111 11111 122 2233445566666643222 699
Q ss_pred EeCCHHHHHHHHHh---hCC--C-CCCCeEEEecccCchhHHHHHHHH-----HHcC-----cEEEEEeccCCCC-----
Q 002866 221 FTVSRGSAFKLLAE---SYP--F-HTNKKLLTMFDYESQSVNWMAQSA-----KEKG-----AKVYSAWFKWPTL----- 279 (872)
Q Consensus 221 FTsnATeALnLVae---slp--f-~~Gd~ILT~~DhEHnSVl~~~~~A-----krkG-----aeV~~Vpvd~p~g----- 279 (872)
|+.++|||+..... .+. - ....+||+...--|.......... .+.. ..+..+|......
T Consensus 108 f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 187 (428)
T PRK07986 108 LADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWD 187 (428)
T ss_pred EeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhH
Confidence 99999997665333 220 0 112456655432243322211110 0000 1122233211000
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCc-cCcccchhc----HHH-HHHHHHCCcEEEeeccccC-CCC--CccCCC
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQ-SRVTGAKYS----YQW-MALAQQNHWHVLLDAGSLG-PKD--MDSLGL 350 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~v-SNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~a-G~~--mipLDL 350 (872)
.-+.+++++.|... ..+...|.+--+ +...|.+.| ++. .+.|+++|+++++|=+|.+ |.. +.-.+.
T Consensus 188 ~~d~~~l~~~l~~~-----~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~ 262 (428)
T PRK07986 188 ERDIAPFARLMAAH-----RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEH 262 (428)
T ss_pred HHHHHHHHHHHHhC-----CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecc
Confidence 01335566666421 234666666553 666676554 333 3567899999999999742 220 001123
Q ss_pred CCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 351 SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
....||+++ +=|-+|+.=.=+|++.+++++.+.+.
T Consensus 263 ~gv~PDi~t--~gK~l~gG~~p~~av~~~~~i~~~~~ 297 (428)
T PRK07986 263 AGIAPDILC--LGKALTGGTMTLSATLTTREVAETIS 297 (428)
T ss_pred cCCCCCEEE--echhhhCCcccCcchhchHHHHHHhh
Confidence 345688886 45655430001355566666655443
No 364
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=91.04 E-value=3.1 Score=48.66 Aligned_cols=220 Identities=10% Similarity=0.069 Sum_probs=106.7
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||..+. +--.+.+.+++.+. + ..+.....++.++ ....+.-++|++++....+ .|.|
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q-------l-~~l~~~~~~~~~~--~~~~~lae~L~~~~p~~~~--~v~f 121 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQ-------L-NKIAHSTLLGLAN--VPSILLAEKLIEVVPEGLK--KVFY 121 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHH-------H-HhCCCccccccCC--HHHHHHHHHHHHhCCCCCC--EEEE
Confidence 45789997543 44566777765331 1 1111000111122 2334555677777643222 6999
Q ss_pred eCCHHHHHHHHHh---hCCC---CCCC-eEEEecccCchhHHHHHHHHH----HcC-----cEEEEEeccC----CCC-c
Q 002866 222 TVSRGSAFKLLAE---SYPF---HTNK-KLLTMFDYESQSVNWMAQSAK----EKG-----AKVYSAWFKW----PTL-K 280 (872)
Q Consensus 222 TsnATeALnLVae---slpf---~~Gd-~ILT~~DhEHnSVl~~~~~Ak----rkG-----aeV~~Vpvd~----p~g-~ 280 (872)
+.++|||+..... .+.- .+|+ +||+....-|........... +.+ ..+..+|... +.+ .
T Consensus 122 ~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~ 201 (460)
T PRK06916 122 SDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGND 201 (460)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCC
Confidence 9999997665433 2210 2333 466554323443322221100 000 1123333210 000 0
Q ss_pred ------cCHHHHHHHHhhhhccCCCCCceEEEEeC-ccCcccchhc-HHHH----HHHHHCCcEEEeeccccC-CCC--C
Q 002866 281 ------LCSTDLRKQISSKKRRKKDSAAGLFVFPV-QSRVTGAKYS-YQWM----ALAQQNHWHVLLDAGSLG-PKD--M 345 (872)
Q Consensus 281 ------Id~edLe~~I~~~~rr~~~~~T~LVa~p~-vSNvTG~i~P-Le~I----~~Are~G~~VLVDAAQ~a-G~~--m 345 (872)
-+.+.+++.|... ..+...|.+-- +....|.+.| -+.+ +.|+++|+++++|=+|.+ |.. +
T Consensus 202 ~~~~~~~~~~~l~~~l~~~-----~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~ 276 (460)
T PRK06916 202 KAEIVKKHLEELEELLKEK-----HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKM 276 (460)
T ss_pred hHHHHHHHHHHHHHHHHhC-----CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchh
Confidence 1234455555421 12455555544 4566687764 3333 356899999999999752 320 0
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
.-.+.-...||++++ =|-+|+.=.-+|++.+++++.+.+
T Consensus 277 ~a~~~~gv~PDiv~~--gK~l~gG~~Pi~av~~~~ei~~~~ 315 (460)
T PRK06916 277 FACEHENVTPDIMTA--GKGLTGGYLPIAITVTTDEIYNAF 315 (460)
T ss_pred hHHHhcCCCCCeeee--ehhhhcCccccceeeecHHHHHHh
Confidence 111222357998876 565443000178888887765543
No 365
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=90.95 E-value=4.1 Score=47.78 Aligned_cols=94 Identities=12% Similarity=0.201 Sum_probs=56.3
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeC-ccCcccchhcHH----HH-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPV-QSRVTGAKYSYQ----WM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFR 354 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~-vSNvTG~i~PLe----~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~ 354 (872)
+.+++.|... ..+...|.+-- +....|.+.|-. .+ +.|+++|+++++|=+|. .|.. +.-.+.-...
T Consensus 202 ~~le~~~~~~-----~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~ 276 (466)
T PRK07030 202 AHMEQTLAEH-----HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIR 276 (466)
T ss_pred HHHHHHHHhC-----CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCC
Confidence 4456666421 22455555555 455668877632 23 45689999999999975 3320 1111223457
Q ss_pred CcEEEEcccccCCCC--CCceEEEEEeCCCcccc
Q 002866 355 PDFIITSFYRVFGFD--PTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~--PtGvG~LyVRk~~i~~L 386 (872)
||++++ =|.+|+. | +|++.+++++.+.+
T Consensus 277 PDiv~~--gKgl~gG~~P--i~av~~~~ei~~~~ 306 (466)
T PRK07030 277 PDFLCL--SKALTGGYLP--LAAVLTTDTVYQAF 306 (466)
T ss_pred CCEEee--ehhccCCccc--ceEEEecHHHHHHH
Confidence 999998 4655530 2 78888888776544
No 366
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=90.71 E-value=13 Score=43.62 Aligned_cols=178 Identities=12% Similarity=0.077 Sum_probs=92.7
Q ss_pred HHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHH-----HHcCc-----E
Q 002866 200 HDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSA-----KEKGA-----K 268 (872)
Q Consensus 200 eeARerIA~lLgA~~dEY~VVFTsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~A-----krkGa-----e 268 (872)
.+.-+++++++.... ..|.|+.++|||+.....- ..+....+||+....-|.......... .+.+. .
T Consensus 99 ~~lae~L~~~~p~~~--~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~ 176 (457)
T PRK05639 99 IRVAEKLAEISPIEN--PKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPN 176 (457)
T ss_pred HHHHHHHHhhCCCCc--CEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCC
Confidence 345566777665322 2699999999986654332 112223356654332244333222111 11121 2
Q ss_pred EEEEeccCCCC-c------cCHH--------HHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH-HH---H-HHHHH
Q 002866 269 VYSAWFKWPTL-K------LCST--------DLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY-QW---M-ALAQQ 328 (872)
Q Consensus 269 V~~Vpvd~p~g-~------Id~e--------dLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL-e~---I-~~Are 328 (872)
+.++|...+.. . -+.+ .++..|.... ....+..-|.+--+....|.+.|- .. + +.|++
T Consensus 177 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~ 254 (457)
T PRK05639 177 VVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHV--VPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDE 254 (457)
T ss_pred ceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhh--cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 44555432100 0 0122 2333332110 012346666666676777887773 32 3 45689
Q ss_pred CCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcc
Q 002866 329 NHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 329 ~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~ 384 (872)
+|+++++|=+|. .|.. +.-.+.-...||+++ +=|.+|+ =.++|+++.++++++
T Consensus 255 ~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~g-G~pi~av~~~~~i~~ 310 (457)
T PRK05639 255 HGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVAS-GMGLSGVIGRKELMD 310 (457)
T ss_pred cCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcC-CCcceeEEehHHHHh
Confidence 999999999976 2210 001122234799988 4687653 134789999988776
No 367
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=90.44 E-value=0.87 Score=50.75 Aligned_cols=100 Identities=12% Similarity=-0.003 Sum_probs=63.5
Q ss_pred hhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHH
Q 002866 694 LDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLA 773 (872)
Q Consensus 694 Ldh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLA 773 (872)
++.+...|+..+..|.+.|.++|...|.++... .+++ ..+.++|.|++....| +....+.+.+
T Consensus 298 l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~-----------~~~~----~~~~~~v~~~~~~~~~--~~~~~~~~~L 360 (398)
T cd00613 298 IVYLGPEGLKEIAERAHLNANYLAKRLKEVGGV-----------LPFN----GPFFHEFVLRLPPLYG--IRAEDLAKAL 360 (398)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----------ccCC----CCeeEEEEEEcCCcch--HHHHHHHHhh
Confidence 445556688889999999999999999988641 1121 2455677888753112 2233333333
Q ss_pred HHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHH
Q 002866 774 EKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAF 848 (872)
Q Consensus 774 dr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~F 848 (872)
.++||.+..-. . . +.++||+|..+++|.|||++|++.
T Consensus 361 ~~~gi~~~~~~---------~---------------------~--------~~~~lRis~~~~~t~edid~~~~~ 397 (398)
T cd00613 361 IDGGFHAPTMY---------L---------------------P--------VDGTLMIEPTETETKEELDALLEA 397 (398)
T ss_pred hhcCccccccc---------c---------------------C--------CCCeEEEEcCCCCCHHHHHHHHHh
Confidence 34555321100 0 0 124899999999999999999875
No 368
>PRK07483 hypothetical protein; Provisional
Probab=90.09 E-value=5.1 Score=46.68 Aligned_cols=82 Identities=15% Similarity=0.228 Sum_probs=50.2
Q ss_pred CceEEEEeCcc-Ccccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCC
Q 002866 301 AAGLFVFPVQS-RVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPT 371 (872)
Q Consensus 301 ~T~LVa~p~vS-NvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~Pt 371 (872)
+...|.+--+. ..-|.+.| ++.+ +.|+++|+++++|=+|. .|.. +.-...-...||.+++ =|-+|+
T Consensus 199 ~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~g--- 273 (443)
T PRK07483 199 TVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTI--AKGLGA--- 273 (443)
T ss_pred ceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeee--hhhhcc---
Confidence 35444444444 34577776 3333 45789999999999976 3220 0011112346998887 465553
Q ss_pred c---eEEEEEeCCCccccc
Q 002866 372 G---FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 372 G---vG~LyVRk~~i~~L~ 387 (872)
| +|++++++++.+.+.
T Consensus 274 G~~Pi~av~~~~~i~~~~~ 292 (443)
T PRK07483 274 GYQPIGAVLASDRIYDAIA 292 (443)
T ss_pred CccccEEEEEcHHHHHHHh
Confidence 3 788988888766554
No 369
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=89.97 E-value=12 Score=43.39 Aligned_cols=84 Identities=12% Similarity=0.119 Sum_probs=50.6
Q ss_pred CceEEEEeCccCcccchhcH-H----HHHHHHHCCcEEEeecccc-CCCCCccCCCCCC--CCcEEEEcccccCCCCCCc
Q 002866 301 AAGLFVFPVQSRVTGAKYSY-Q----WMALAQQNHWHVLLDAGSL-GPKDMDSLGLSLF--RPDFIITSFYRVFGFDPTG 372 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PL-e----~I~~Are~G~~VLVDAAQ~-aG~~mipLDLs~l--~~DFlv~S~HK~fG~~PtG 372 (872)
+...|.+--+....|.+.|- + ..+.|+++|++++.|=++. .+..-..+-+..+ .||.+ ++=|.+++ =.=
T Consensus 219 ~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~~-G~p 295 (451)
T PRK06918 219 TIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLGA-GVP 295 (451)
T ss_pred ceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhcC-CCc
Confidence 45555555566667877763 2 2356789999999999964 2221012222223 38854 56787663 122
Q ss_pred eEEEEEeCCCccccc
Q 002866 373 FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 vG~LyVRk~~i~~L~ 387 (872)
+|+++.++++++.+.
T Consensus 296 ig~v~~~~~i~~~~~ 310 (451)
T PRK06918 296 ISGVIGRKEIMDESA 310 (451)
T ss_pred cEEEEEcHHHHhccC
Confidence 788888877665553
No 370
>PRK09064 5-aminolevulinate synthase; Validated
Probab=89.92 E-value=1.5 Score=49.35 Aligned_cols=107 Identities=13% Similarity=-0.010 Sum_probs=70.6
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQK 771 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vqk 771 (872)
..|++++..+ ....|++.+.++|.+.|.++.+ .++++ .++++.|.+-+. .-.-.+.++
T Consensus 290 ~al~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~------------~~~~~-----~~~iv~i~~~~~---~~~~~l~~~ 347 (407)
T PRK09064 290 ASIRHLKESN--EERERHQERAAKLKAALDAAGI------------PVMPN-----ESHIVPVMVGDP---EKCKKASDM 347 (407)
T ss_pred HHHHHHhcCH--HHHHHHHHHHHHHHHHHHHcCC------------CCCCC-----CCCEEEEEeCCH---HHHHHHHHH
Confidence 3567766654 3357788899999999988643 23332 477888877431 112234555
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
|.+++||-++.... |. .+ .+...+|+|+++..|.||+++|++.+.+
T Consensus 348 L~~~~gi~v~~~~~--p~--------------------------~~------~~~~~lRis~~~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 348 LLEEHGIYVQPINY--PT--------------------------VP------RGTERLRITPTPFHTDEMIDHLVEALVE 393 (407)
T ss_pred HHHhCCEEEeeECC--CC--------------------------CC------CCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 66777998876211 10 00 0124799999999999999999999998
Q ss_pred hcC
Q 002866 852 FLN 854 (872)
Q Consensus 852 Fld 854 (872)
.+.
T Consensus 394 ~~~ 396 (407)
T PRK09064 394 VWA 396 (407)
T ss_pred HHH
Confidence 653
No 371
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=89.76 E-value=2.3 Score=47.26 Aligned_cols=164 Identities=18% Similarity=0.291 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH------HHHHHHhhCCCCCCC---eEEEecccCchhHHHHHHHHHHcC
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS------AFKLLAESYPFHTNK---KLLTMFDYESQSVNWMAQSAKEKG 266 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATe------ALnLVaeslpf~~Gd---~ILT~~DhEHnSVl~~~~~AkrkG 266 (872)
..+++++-..+-+++|++ +.|.|+|.+|+.. ++|+++ .+.|+ -|+|-.- |-.. .+-|++.|
T Consensus 51 ~kii~~tes~lreLlniP-dn~~vlf~QGGGt~qFaAv~lNL~g----lK~g~~AdYiVTGsW----S~KA-~~EAkk~~ 120 (370)
T KOG2790|consen 51 AKIINDTESLLRELLNIP-DNYKVLFLQGGGTGQFAAVPLNLIG----LKHGRCADYVVTGSW----SAKA-AEEAKKYG 120 (370)
T ss_pred HHHHHHHHHHHHHHHcCC-CceeEEEEeCCCcccccccchhhhc----cccCCccceEEeccc----cHHH-HHHHHhhC
Confidence 368889999999999997 5689999965433 356655 34443 3565421 1112 24466667
Q ss_pred cEEEEEec-cCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccc-cCCC
Q 002866 267 AKVYSAWF-KWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGS-LGPK 343 (872)
Q Consensus 267 aeV~~Vpv-d~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ-~aG~ 343 (872)
.--.++|- ... -+.+...+. +. .+++.+.|-++.---+.|+-++-- ..---+|...+.|.+. ++.+
T Consensus 121 ~~~~V~~~~k~y~ygkvPd~~~---w~------~~~da~yvyyCaNETVHGVEf~~~--P~~~~~~~vlVaDmSSnflSr 189 (370)
T KOG2790|consen 121 TPNIVIPKLKSYTYGKVPDPST---WE------LNPDASYVYYCANETVHGVEFDFI--PVNDPKGAVLVADMSSNFLSR 189 (370)
T ss_pred CceEEeccccccccCcCCChhh---cc------cCCCccEEEEecCceeeceecCCC--CCCCCCCceEEEecccchhcC
Confidence 54333332 111 122322211 11 234566777766555567655421 1112357777889985 5665
Q ss_pred CCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 344 DMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 344 ~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
|+|++++ +.+.....|-.| |.|+-+.+||++++....
T Consensus 190 ---pvDvsk~--gvi~aGAQKN~G--~aG~Tvvivr~dllg~~~ 226 (370)
T KOG2790|consen 190 ---PVDVSKF--GVIFAGAQKNVG--PAGVTVVIVRKDLLGNAL 226 (370)
T ss_pred ---Cccchhc--ceEEeccccccC--ccccEEEEEehhhhcccc
Confidence 8999977 556677899888 899999999999875443
No 372
>PRK07179 hypothetical protein; Provisional
Probab=89.36 E-value=1.9 Score=48.82 Aligned_cols=104 Identities=15% Similarity=0.196 Sum_probs=69.5
Q ss_pred hhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHH
Q 002866 694 LDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLA 773 (872)
Q Consensus 694 Ldh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLA 773 (872)
+++++.. .....|++.+.++|.+.|.++.. +|+| .|+++.+.+-+. .....+.+.+
T Consensus 295 l~~~~~~--~~~~~~l~~~~~~l~~~L~~~g~------------~v~~------~~~i~~l~~~~~----~~~~~~~~~L 350 (407)
T PRK07179 295 LEVIESA--DDRRARLHANARFLREGLSELGY------------NIRS------ESQIIALETGSE----RNTEVLRDAL 350 (407)
T ss_pred HHHHhcC--HHHHHHHHHHHHHHHHHHHHcCC------------CCCC------CCCEEEEEeCCH----HHHHHHHHHH
Confidence 4544332 45668899999999999988743 4454 368888886331 2335566666
Q ss_pred HHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 774 EKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 774 dr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.++||..+ .+|.+.. . . +-.+||+|++...|.|||+++++.+.+.+
T Consensus 351 ~~~GI~~~--~~~~p~~----------------------~--~--------~~~~lRis~~~~~t~edi~~~~~~l~~~~ 396 (407)
T PRK07179 351 EERNVFGA--VFCAPAT----------------------P--K--------NRNLIRLSLNADLTASDLDRVLEVCREAR 396 (407)
T ss_pred HHCCceEe--eecCCCC----------------------C--C--------CCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 77898732 2332210 0 0 02489999999999999999999999866
Q ss_pred Cc
Q 002866 854 NP 855 (872)
Q Consensus 854 d~ 855 (872)
+.
T Consensus 397 ~~ 398 (407)
T PRK07179 397 DE 398 (407)
T ss_pred Hh
Confidence 53
No 373
>PRK06917 hypothetical protein; Provisional
Probab=89.04 E-value=14 Score=43.05 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=49.0
Q ss_pred CceEEEEeC-ccCcccchhcH-HHH----HHHHHCCcEEEeeccccC-CCC--CccCCCCCCCCcEEEEcccccCCCCCC
Q 002866 301 AAGLFVFPV-QSRVTGAKYSY-QWM----ALAQQNHWHVLLDAGSLG-PKD--MDSLGLSLFRPDFIITSFYRVFGFDPT 371 (872)
Q Consensus 301 ~T~LVa~p~-vSNvTG~i~PL-e~I----~~Are~G~~VLVDAAQ~a-G~~--mipLDLs~l~~DFlv~S~HK~fG~~Pt 371 (872)
+..-|.+-- +.+.-|.+.|= +.+ +.|+++|+++++|=+|.+ |.. +.-...-...||++++ =|.+|+
T Consensus 199 ~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~--gK~l~~--- 273 (447)
T PRK06917 199 HIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTL--GKGLGA--- 273 (447)
T ss_pred ceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEEe--eehhcc---
Confidence 344444444 44455676663 333 456899999999999752 210 0001122346998766 587663
Q ss_pred c---eEEEEEeCCCccccc
Q 002866 372 G---FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 372 G---vG~LyVRk~~i~~L~ 387 (872)
| +|++.+++++.+.+.
T Consensus 274 G~~Pi~a~~~~~~i~~~~~ 292 (447)
T PRK06917 274 GYTPIAATVVSDRVMEPIL 292 (447)
T ss_pred CCcceEEEEEcHHHHHHHh
Confidence 3 788888887766553
No 374
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=88.96 E-value=7.3 Score=45.88 Aligned_cols=81 Identities=9% Similarity=0.107 Sum_probs=51.5
Q ss_pred CceEEEEeC-ccCcccchhcHH-H---H-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCC
Q 002866 301 AAGLFVFPV-QSRVTGAKYSYQ-W---M-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPT 371 (872)
Q Consensus 301 ~T~LVa~p~-vSNvTG~i~PLe-~---I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~Pt 371 (872)
+..-|.+-- +....|.+.|-. . + +.|+++|+++++|=+|. .|.. |.-.+.-...||++++ =|.+|+
T Consensus 236 ~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~--gKgl~g--- 310 (472)
T PRK08742 236 EICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCL--SKGLTG--- 310 (472)
T ss_pred ceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEE--cccccC---
Confidence 456666655 466678877643 3 3 45689999999999976 3320 1112223457999998 476553
Q ss_pred c---eEEEEEeCCCcccc
Q 002866 372 G---FGCLLIKKSVMGSL 386 (872)
Q Consensus 372 G---vG~LyVRk~~i~~L 386 (872)
| +|++++++++.+.+
T Consensus 311 G~~Plaav~~~~ei~~~~ 328 (472)
T PRK08742 311 GFLPLSAVLATQQLYDAF 328 (472)
T ss_pred CCCCcceeeccHHHHHHh
Confidence 3 78888887765543
No 375
>PLN02721 threonine aldolase
Probab=88.80 E-value=3.4 Score=45.07 Aligned_cols=90 Identities=16% Similarity=0.119 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeecccccc
Q 002866 709 LRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIGFLSHI 788 (872)
Q Consensus 709 ~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G~l~~i 788 (872)
.+.+.+|+++.|.++.. .. ++++.| +++.+.|.+.+..+ .-...+.++|. ++||.++.+.
T Consensus 263 ~~~~~~~l~~~L~~~~~--------~~-~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~L~-~~gi~v~~~~---- 322 (353)
T PLN02721 263 DHKKAKLLAEGLNQIKG--------LR-VNVAAV-----ETNIVYFDITDGSR-ITAEKLCKSLE-EHGVLLMPGN---- 322 (353)
T ss_pred HHHHHHHHHHHHHhCCC--------cE-EecCCc-----cceEEEEEccCCcc-ccHHHHHHHHH-hCCcEEecCC----
Confidence 34577899999987743 11 223332 46788888864211 11234455555 7888887440
Q ss_pred cccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 789 RILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 789 ~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
...||+++++..+.+|+.++++.+.+.++.
T Consensus 323 -------------------------------------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 323 -------------------------------------SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred -------------------------------------CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 127999999999999999999999987653
No 376
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=88.54 E-value=0.27 Score=55.69 Aligned_cols=133 Identities=16% Similarity=0.238 Sum_probs=73.1
Q ss_pred echhhhhhhhcchhhHHHHHHHHHHHHH--HHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHH
Q 002866 691 CRHLDHINMLGLNKTTCRLRFLINWLVT--SLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEV 768 (872)
Q Consensus 691 c~gLdh~d~lGl~~I~~R~r~L~~wLv~--~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~ 768 (872)
.++|..+..- |...+.-...|.+||-. ...+..||.- ...|=+++|++.. ..+|++|+||+ + |.--....
T Consensus 236 ~~~l~tl~~R-~e~~~~na~~la~~L~~~~~v~~v~~p~l---~~~p~~~l~~~~~-~g~~~~~sf~~-~--~~~~~~~~ 307 (378)
T TIGR01329 236 LRGIKTLAIR-IEKQQENARAIAMFLSTHPRVKKVRYAGL---PSHPGFHLHFSQA-KGAGSVLSFET-G--SVALSKRL 307 (378)
T ss_pred HccCCCHHHH-HHHHHHHHHHHHHHHHhCCCccEEECCCC---CCCccHHHHHHhC-CCcceEEEEEE-C--CHHHHHHH
Confidence 3444433322 67777778888998862 1233344432 2234456676654 36899999999 2 21112233
Q ss_pred HHHHHHHcCCeEeec----ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHH
Q 002866 769 VQKLAEKEGISLGIG----FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYK 844 (872)
Q Consensus 769 VqkLAdr~~IsLr~G----~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyr 844 (872)
+.+| ...+|..+.| ..+||.-..++.... + .....| +.-+.||.|.|+ ||+.-
T Consensus 308 ~~~L-~~~~i~~s~G~~~sl~~~p~~~~~~~~~~-----~-----~~~~~g--------i~~~liR~svGl----E~~~d 364 (378)
T TIGR01329 308 VEAT-KLFSITVSFGSVNSLISMPCFMSHASIPA-----E-----VREERG--------LPEDLVRLSVGI----EDVDD 364 (378)
T ss_pred HHhC-cCcccccCCCCCCceeeCCCccccccCCH-----H-----HHHhcC--------CCCCeEEEEecc----CCHHH
Confidence 3333 4567777887 333443222221100 0 000112 236799999998 89998
Q ss_pred HHHHHHHhcC
Q 002866 845 LWAFVAKFLN 854 (872)
Q Consensus 845 l~~Fva~Fld 854 (872)
||+=+.+-|+
T Consensus 365 l~~dl~~al~ 374 (378)
T TIGR01329 365 LISDLDIAFV 374 (378)
T ss_pred HHHHHHHHHH
Confidence 9887776443
No 377
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=88.43 E-value=21 Score=41.52 Aligned_cols=75 Identities=19% Similarity=0.340 Sum_probs=43.3
Q ss_pred ceEEEEeCccCcccchh-cHHH---H-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCC-CCc
Q 002866 302 AGLFVFPVQSRVTGAKY-SYQW---M-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFD-PTG 372 (872)
Q Consensus 302 T~LVa~p~vSNvTG~i~-PLe~---I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~-PtG 372 (872)
..+++-| +.+..|.+. |-+. + +.|+++|+++++|=+|. .|.. +...+--...||.+++ =|-+|.. |
T Consensus 208 aavi~Ep-i~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~~G~P-- 282 (442)
T TIGR00709 208 AAVILEA-IQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVM--SKAVGGGLP-- 282 (442)
T ss_pred EEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEE--cccccCCcc--
Confidence 3455555 444556664 5443 3 45789999999999975 3321 1111122356898884 5755420 2
Q ss_pred eEEEEEeCC
Q 002866 373 FGCLLIKKS 381 (872)
Q Consensus 373 vG~LyVRk~ 381 (872)
+|++.++++
T Consensus 283 igav~~~~~ 291 (442)
T TIGR00709 283 LAVLLIAPE 291 (442)
T ss_pred cEEEEEchH
Confidence 677776665
No 378
>PRK06149 hypothetical protein; Provisional
Probab=88.33 E-value=19 Score=46.27 Aligned_cols=180 Identities=11% Similarity=0.064 Sum_probs=94.7
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHh---hCCCCCCCeEEEecccCchhHHHHHHH--H--HHcCc----
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAE---SYPFHTNKKLLTMFDYESQSVNWMAQS--A--KEKGA---- 267 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVae---slpf~~Gd~ILT~~DhEHnSVl~~~~~--A--krkGa---- 267 (872)
..+.-+++++++-... ..|.|+.++|||+...+. .+ ....+||+....-|.....-... . ...+.
T Consensus 626 ~~elae~L~~~~p~~~--~~v~f~~SGsEA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~ 701 (972)
T PRK06149 626 VAEFSERLAALAPDGL--DTVFLVNSGSEANDLAIRLAWAA--SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETR 701 (972)
T ss_pred HHHHHHHHHHhCCCCc--CEEEEeCCchHHHHHHHHHHHHh--cCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCC
Confidence 3455566777763221 269999999998776554 44 22345665533224222111000 0 00000
Q ss_pred --EEEEEeccCC-CCcc---C-----HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCc
Q 002866 268 --KVYSAWFKWP-TLKL---C-----STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHW 331 (872)
Q Consensus 268 --eV~~Vpvd~p-~g~I---d-----~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~ 331 (872)
-+..++.... .+.. + .++++..+.... ....+...|.+--+....|.+.| ++.+ +.|+++|+
T Consensus 702 ~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~ 779 (972)
T PRK06149 702 PDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELD--ASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGG 779 (972)
T ss_pred CCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHh--hcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCC
Confidence 1222222110 0111 1 234444443211 11234666666666667798888 6654 56799999
Q ss_pred EEEeecccc-CCCCCcc-C-CC--CCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 332 HVLLDAGSL-GPKDMDS-L-GL--SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 332 ~VLVDAAQ~-aG~~mip-L-DL--s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
.+++|=+|. .|. +-. + -. ....||.+++ =|-+|.. .-+|++.+++++.+.+.+
T Consensus 780 llI~DEV~tGfGR-tG~~~~a~e~~gv~PDivt~--gK~lg~G-~Pl~av~~~~~i~~~~~~ 837 (972)
T PRK06149 780 VCIADEVQVGYGR-LGHYFWGFEQQGVVPDIITM--AKGMGNG-HPLGAVITRREIAEALEA 837 (972)
T ss_pred EEEEEeehhcCCc-cCccchhhhhcCCCCCEEEe--cccccCC-eeeEEEEEcHHHHhhhcc
Confidence 999999983 332 111 1 11 2346998865 5766530 117999999988776653
No 379
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=87.83 E-value=12 Score=43.42 Aligned_cols=94 Identities=12% Similarity=0.211 Sum_probs=55.4
Q ss_pred HHHHHHHHhhhhccCCCCCceEEEEeCc-cCcccchhc-HHHH----HHHHHCCcEEEeeccccC-CCC--CccCCCCCC
Q 002866 283 STDLRKQISSKKRRKKDSAAGLFVFPVQ-SRVTGAKYS-YQWM----ALAQQNHWHVLLDAGSLG-PKD--MDSLGLSLF 353 (872)
Q Consensus 283 ~edLe~~I~~~~rr~~~~~T~LVa~p~v-SNvTG~i~P-Le~I----~~Are~G~~VLVDAAQ~a-G~~--mipLDLs~l 353 (872)
.+.|++.|... ..+..-|.+--+ ....|.+.| -+.+ +.|+++|+++++|=+|.+ |.. +.-.+.-..
T Consensus 193 l~~l~~~i~~~-----~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv 267 (429)
T PRK06173 193 IEPLQDLLEQK-----GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV 267 (429)
T ss_pred HHHHHHHHHhC-----CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCC
Confidence 44456666421 234666666654 666787754 3333 457899999999999842 210 111122234
Q ss_pred CCcEEEEcccccCCCCCCc---eEEEEEeCCCcccc
Q 002866 354 RPDFIITSFYRVFGFDPTG---FGCLLIKKSVMGSL 386 (872)
Q Consensus 354 ~~DFlv~S~HK~fG~~PtG---vG~LyVRk~~i~~L 386 (872)
.||+++ +=|-+|+ | ++++++++++.+.+
T Consensus 268 ~PDiv~--~gK~l~g---G~~p~~a~~~~~~i~~~~ 298 (429)
T PRK06173 268 VPDIMC--IGKALTG---GYLTLSATITTEAIAQTI 298 (429)
T ss_pred CCCEEE--eehhhhC---CccccceEEecHHHHHHH
Confidence 689887 5676553 3 47777777766544
No 380
>PRK07908 hypothetical protein; Provisional
Probab=87.25 E-value=3 Score=46.02 Aligned_cols=91 Identities=20% Similarity=0.186 Sum_probs=65.4
Q ss_pred hhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeec
Q 002866 704 KTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIG 783 (872)
Q Consensus 704 ~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G 783 (872)
.+..+.+...+++++.|.++ . +++|.|. .|..|-+.+-+ ...+.+++.++||.++.|
T Consensus 257 ~~~~~~~~~r~~l~~~L~~~-~-----------~~~~~p~----~g~~~~~~~~~-------~~~~~~~l~~~gI~v~~g 313 (349)
T PRK07908 257 ADAARLAADRAEMVAGLRAV-G-----------ARVVDPA----AAPFVLVRVPD-------AELLRKRLRERGIAVRRG 313 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhC-C-----------cEeccCC----CceEEEEECCc-------HHHHHHHHHhCCEEEEEC
Confidence 35677777788888888765 2 5677653 48888887653 467888888999999877
Q ss_pred ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 784 FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 784 ~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
.... + . +...||+|++ +.+|+.+|++.+.+++.+
T Consensus 314 ~~f~-----------~----------------~--------~~~~vRis~~---~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 314 DTFP-----------G----------------L--------DPDYLRLAVR---PRAEVPVLVQALAEILKA 347 (349)
T ss_pred CCCC-----------C----------------C--------CCCeEEEEeC---CCccHHHHHHHHHHHHhc
Confidence 4220 0 0 0237899985 889999999999997665
No 381
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=85.79 E-value=6.2 Score=43.79 Aligned_cols=98 Identities=16% Similarity=0.122 Sum_probs=60.5
Q ss_pred hhhhhhhhcchhhHHHHHHHH---HHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHH
Q 002866 693 HLDHINMLGLNKTTCRLRFLI---NWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVV 769 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~---~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~V 769 (872)
++..++.-|...+..+.+.+. ++|+..|.++.. +++|.| .|..+-+.+. +...+
T Consensus 253 a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-----------~~~~~~-----~g~f~~~~~~-------~~~~~ 309 (354)
T PRK04635 253 ATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGG-----------AKVLEG-----NGNYVLAKFD-------DVDAV 309 (354)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------ceECCC-----CCcEEEEECC-------CHHHH
Confidence 344444445555555555554 677888876532 566655 2444433332 34566
Q ss_pred HHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 770 QKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 770 qkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
.+++.++||.++.+ .+ . + . .+.||+|+| +.||+.+|++.+
T Consensus 310 ~~~l~~~gv~v~~~--~~------~----~----------------~---------~~~lRis~~---~~e~~~~l~~al 349 (354)
T PRK04635 310 FKALWDAGIVARAY--KD------P----R----------------L---------ANCIRFSFS---NRAETDKLIGLI 349 (354)
T ss_pred HHHHHHCCEEEEEC--CC------C----C----------------C---------CCeEEEEeC---CHHHHHHHHHHH
Confidence 77778899999742 10 0 0 0 137899965 899999999999
Q ss_pred HHhc
Q 002866 850 AKFL 853 (872)
Q Consensus 850 a~Fl 853 (872)
.++.
T Consensus 350 ~~~~ 353 (354)
T PRK04635 350 RNQY 353 (354)
T ss_pred HHhc
Confidence 8853
No 382
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=85.78 E-value=11 Score=43.55 Aligned_cols=85 Identities=11% Similarity=0.138 Sum_probs=50.3
Q ss_pred CceEEEEeC-ccCcccchhcH-HH---H-HHHHHCCcEEEeeccccC-CCC--CccCCCCCCCCcEEEEcccccCCCCCC
Q 002866 301 AAGLFVFPV-QSRVTGAKYSY-QW---M-ALAQQNHWHVLLDAGSLG-PKD--MDSLGLSLFRPDFIITSFYRVFGFDPT 371 (872)
Q Consensus 301 ~T~LVa~p~-vSNvTG~i~PL-e~---I-~~Are~G~~VLVDAAQ~a-G~~--mipLDLs~l~~DFlv~S~HK~fG~~Pt 371 (872)
++.-|.+-- +....|.+.|- +. + +.|+++|+++++|=+|.+ |.. +.-.......||++++ =|.+|+.=.
T Consensus 200 ~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~--gK~l~gG~~ 277 (422)
T PRK05630 200 TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCV--GKALTGGFM 277 (422)
T ss_pred ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeee--echhhcCcc
Confidence 355555554 35567877653 33 3 457899999999999752 220 1112223457999955 687642000
Q ss_pred ceEEEEEeCCCccccc
Q 002866 372 GFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 372 GvG~LyVRk~~i~~L~ 387 (872)
=+|++.+++++.+.+.
T Consensus 278 p~~av~~~~~i~~~~~ 293 (422)
T PRK05630 278 SFAATLCTDKVAQLIS 293 (422)
T ss_pred ccceeeccHHHHHHHh
Confidence 1577778888776554
No 383
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=85.60 E-value=3.8 Score=46.24 Aligned_cols=107 Identities=12% Similarity=0.016 Sum_probs=70.0
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQK 771 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vqk 771 (872)
..|+++... ..+..+.+.+..+|...|.++.. .++++ .|+++.+.+.+. .....+.++
T Consensus 289 aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~------------~~~~~-----~~~i~~i~~~~~---~~a~~~~~~ 346 (402)
T TIGR01821 289 ASIRHLKES--QDLRRAHQENVKRLKNLLEALGI------------PVIPN-----PSHIVPVIIGDA---ALCKKVSDL 346 (402)
T ss_pred HHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCC------------CcCCC-----CCCEEEEEeCCH---HHHHHHHHH
Confidence 356666554 45566777888899988887654 22332 477888865321 112345566
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
|.+++||.++.... |.+ +. +...||+|+-+..|.||+++|++.+.+
T Consensus 347 L~~~~Gi~v~~~~~--p~~--------------------------~~------g~~~lRis~~~~~t~edi~~~~~~l~~ 392 (402)
T TIGR01821 347 LLNKHGIYVQPINY--PTV--------------------------PR------GTERLRITPTPAHTDKMIDDLVEALLL 392 (402)
T ss_pred HHhcCCEEEEeECC--CCC--------------------------CC------CCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 66778998876321 100 00 023799999999999999999999988
Q ss_pred hcC
Q 002866 852 FLN 854 (872)
Q Consensus 852 Fld 854 (872)
.++
T Consensus 393 ~~~ 395 (402)
T TIGR01821 393 VWD 395 (402)
T ss_pred HHH
Confidence 653
No 384
>PRK06148 hypothetical protein; Provisional
Probab=85.58 E-value=24 Score=45.60 Aligned_cols=84 Identities=12% Similarity=0.164 Sum_probs=55.2
Q ss_pred CceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeecccc-CCCC---CccCCCCCCCCcEEEEcccccCCCCCC
Q 002866 301 AAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSL-GPKD---MDSLGLSLFRPDFIITSFYRVFGFDPT 371 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~-aG~~---mipLDLs~l~~DFlv~S~HK~fG~~Pt 371 (872)
....|.+--+...-|.+.| ++.+ ++|+++|+.+++|=+|. .|.. +.-.......||.+++ =|.+|+. .
T Consensus 784 ~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~--gK~lggG-~ 860 (1013)
T PRK06148 784 GPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTM--GKPIGNG-H 860 (1013)
T ss_pred ceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeee--cccccCC-c
Confidence 4566666666667788887 4444 56799999999999985 3320 1112223457999887 5765530 1
Q ss_pred ceEEEEEeCCCccccc
Q 002866 372 GFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 372 GvG~LyVRk~~i~~L~ 387 (872)
=+|++..++++++.+.
T Consensus 861 Plgav~~~~ei~~~~~ 876 (1013)
T PRK06148 861 PMGAVVTTREIADSFD 876 (1013)
T ss_pred ceEEEEEcHHHHhhcc
Confidence 2899999988877664
No 385
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=85.01 E-value=6.7 Score=42.62 Aligned_cols=103 Identities=16% Similarity=0.094 Sum_probs=66.5
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKL 772 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkL 772 (872)
.|+++.. +..+..|.+.+.++|.+.|.++.. .+|++. .+.+..|.+.+ + .++..|.+.
T Consensus 245 ~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~------------~~~~~~----~~~~~~~~~~~--~--~~~~~~~~~ 302 (349)
T cd06454 245 ALEVLQG--GPERRERLQENVRYLRRGLKELGF------------PVGGSP----SHIIPPLIGDD--P--AKAVAFSDA 302 (349)
T ss_pred HHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCC------------cccCCC----CCcEEEEeCCC--h--HHHHHHHHH
Confidence 4566555 466788999999999999987632 455542 34455554432 1 234545444
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
+.++||.++.+.... . .. +..+||++++.+.|-+||.++++.|.+
T Consensus 303 L~~~gI~~~~~~~~~----------------~-----------~~-------~~~~iRi~~~~~~~~~~i~~~~~~l~~ 347 (349)
T cd06454 303 LLERGIYVQAIRYPT----------------V-----------PR-------GTARLRISLSAAHTKEDIDRLLEALKE 347 (349)
T ss_pred HHhCCceEEEecCCc----------------c-----------CC-------CCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 455599988642110 0 00 024899999999999999999998875
No 386
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=84.63 E-value=5.5 Score=43.88 Aligned_cols=96 Identities=20% Similarity=0.174 Sum_probs=63.7
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEee
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI 782 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~ 782 (872)
..+..+++.+..+|++.|..+. ++++. ..|+++.|.+-+ ..-...++++| .++||.++.
T Consensus 290 ~~~~~~~~~~~~~l~~~L~~~~------------~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~l-~~~gI~v~~ 348 (385)
T PRK05958 290 PERRERLAALIARLRAGLRALG------------FQLMD-----SQSAIQPLIVGD---NERALALAAAL-QEQGFWVGA 348 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC------------CCcCC-----CCCCEEEEEeCC---HHHHHHHHHHH-HHCCceEec
Confidence 4567788888899998888763 23333 367889998743 11223455555 557999975
Q ss_pred cccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 783 GFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 783 G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
+.... . ..| -.+||+|++++.|.+|++++++-+.+.|
T Consensus 349 ~~~~~------~------------------~~~----------~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 349 IRPPT------V------------------PAG----------TSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred ccCCC------C------------------CCC----------CceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 31100 0 000 1389999999999999999999887643
No 387
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=84.50 E-value=4.1 Score=46.17 Aligned_cols=106 Identities=13% Similarity=0.079 Sum_probs=67.9
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKL 772 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkL 772 (872)
.|++++..+.. ..|++.+.++|.+.|.++.. +++ ..+|++|.+.+-+. .-...+.++|
T Consensus 290 aL~~~~~~~~~--~~~~~~~~~~l~~~L~~~g~---------~~~--------~~~~~i~~v~~~~~---~~~~~l~~~L 347 (406)
T PRK13393 290 SVRHLKASSAE--RERHQDRVARLRARLDKAGI---------PHL--------PNPSHIVPVMVGDP---VLCKQISDEL 347 (406)
T ss_pred HHHHHhhCHHH--HHHHHHHHHHHHHHHHHcCC---------CcC--------CCCCCeEEEEeCCH---HHHHHHHHHH
Confidence 56666655433 24566778888888877643 122 13677888765321 1123345556
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
.+++||.++.+..-. .+. +...||+|+.+..|.||+++|++-+.++
T Consensus 348 ~~~~Gi~v~~~~~p~----------------------------~p~------g~~~iRis~~~~~t~edid~l~~~l~~~ 393 (406)
T PRK13393 348 LDRYGIYVQPINYPT----------------------------VPR------GTERLRITPSPLHTDADIEHLVQALSEI 393 (406)
T ss_pred HHhCCEEEEeECCCC----------------------------CCC------CCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 667899988752110 000 1237999999999999999999999987
Q ss_pred cC
Q 002866 853 LN 854 (872)
Q Consensus 853 ld 854 (872)
++
T Consensus 394 ~~ 395 (406)
T PRK13393 394 WA 395 (406)
T ss_pred HH
Confidence 54
No 388
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=84.30 E-value=22 Score=41.15 Aligned_cols=98 Identities=12% Similarity=0.119 Sum_probs=55.5
Q ss_pred HHHHHHHHhhhhccCCCCCceEEEEeCc-cCcccchhc-H---HH-HHHHHHCCcEEEeeccccC-CCC--CccCCCCCC
Q 002866 283 STDLRKQISSKKRRKKDSAAGLFVFPVQ-SRVTGAKYS-Y---QW-MALAQQNHWHVLLDAGSLG-PKD--MDSLGLSLF 353 (872)
Q Consensus 283 ~edLe~~I~~~~rr~~~~~T~LVa~p~v-SNvTG~i~P-L---e~-I~~Are~G~~VLVDAAQ~a-G~~--mipLDLs~l 353 (872)
.+++++++..+ ..+...|.+-.+ +..-|.+.| . +. .+.|+++|+.+++|=+|.+ |.. +.-.+.-.+
T Consensus 194 ~~~l~~~l~~~-----~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v 268 (427)
T TIGR00508 194 ITPLAKLMELH-----SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGV 268 (427)
T ss_pred HHHHHHHHHhc-----CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCC
Confidence 34556666432 124566666664 666676554 2 32 3567899999999999742 220 001222234
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 354 RPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 354 ~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.||++++ =|.+++.-.=++++.+++++.+.++
T Consensus 269 ~pDi~~~--gK~l~gG~~p~~a~~~~~~~~~~~~ 300 (427)
T TIGR00508 269 VPDILCV--GKALTGGYMTLSATVTTDKVAQTIS 300 (427)
T ss_pred CCCEEEe--chhhhcCcccceEEEEcHHHHHHHh
Confidence 7898874 6766530001466777777665554
No 389
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=83.89 E-value=1.7 Score=43.77 Aligned_cols=44 Identities=9% Similarity=0.217 Sum_probs=33.9
Q ss_pred HHHHHHHHhc----C----CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEe
Q 002866 201 DIKTRIMDHL----N----IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTM 247 (872)
Q Consensus 201 eARerIA~lL----g----A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~ 247 (872)
+.|+.||+++ | ++++ .|++|+|+|+|+.+++..+- .+||.|++.
T Consensus 96 ~lR~AiA~~l~~~~g~~v~~~pd--~Ivvt~Ga~~al~~l~~~l~-dpGD~VlVp 147 (153)
T PLN02994 96 NFRKAIANFMAEARGGRVKFDAD--MIVLSAGATAANEIIMFCIA-DPGDAFLVP 147 (153)
T ss_pred HHHHHHHHHHHHHhCCCCccchh--heEEcCCHHHHHHHHHHHHc-CCCCEEEEe
Confidence 4666666655 4 3454 59999999999999999884 789998765
No 390
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=83.51 E-value=7.6 Score=42.22 Aligned_cols=92 Identities=18% Similarity=0.163 Sum_probs=61.1
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEee
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI 782 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~ 782 (872)
..+..+++.+.++|++.|.++.. +++. ..|+++.|.+-+ ..+...+++.+.++||.++.
T Consensus 268 ~~~~~~~~~~~~~l~~~L~~~~~------------~~~~-----~~~~~~~~~~~~----~~~~~~~~~~l~~~gI~v~~ 326 (360)
T TIGR00858 268 PWRREKLLALIARLRAGLEALGF------------TLMP-----SCTPIVPVIIGD----NASALALAEELQQQGIFVGA 326 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC------------ccCC-----CCCCEEEEEeCC----HHHHHHHHHHHHHCCeeEee
Confidence 45678899999999999987643 2332 357788887632 12333444445567999986
Q ss_pred cccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 783 GFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 783 G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
+..... . .| -..||+|++++.|-+|+.++++.+
T Consensus 327 ~~~~~~-----~-------------------~~----------~~~iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 327 IRPPTV-----P-------------------AG----------TSRLRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred eCCCCC-----C-------------------CC----------CceEEEEEcCCCCHHHHHHHHHhh
Confidence 421100 0 00 137999999999999999998865
No 391
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=82.35 E-value=22 Score=41.17 Aligned_cols=62 Identities=13% Similarity=0.040 Sum_probs=41.8
Q ss_pred CCceEEEEeCccCcccchhcH----HHH-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEc
Q 002866 300 SAAGLFVFPVQSRVTGAKYSY----QWM-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITS 361 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~PL----e~I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S 361 (872)
.++..|.+..+....|.+.|- +.+ +.|+++|+++++|-+|. .|.. +...+...+.||+++++
T Consensus 217 ~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~g 286 (431)
T TIGR03251 217 HDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFG 286 (431)
T ss_pred CcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEec
Confidence 457788888888888988642 333 46799999999999987 4431 00122234579998764
No 392
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=82.26 E-value=6.8 Score=43.70 Aligned_cols=97 Identities=14% Similarity=0.206 Sum_probs=62.6
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
++..+..|++.+.+++...|.++. +.++++ .++++.+-+.+. .-...++++|. ++||.+
T Consensus 290 ~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~-----~~~~~~i~~~~~---~~~~~l~~~L~-~~gI~v 348 (393)
T TIGR01822 290 ASNELRDRLWANTRYFRERMEAAG------------FDIKPA-----DHPIIPVMLYDA---VLAQRFARRLL-EEGIYV 348 (393)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcC------------CCCCCC-----CCCEEEEEeCCH---HHHHHHHHHHH-HCCeeE
Confidence 356778899999999999997752 233433 356666654431 11234455555 459988
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
+ |... +.. . .+ ...||+|+++.+|.||++++++-+.+-
T Consensus 349 ~-~~~~-~~~---~-------------------~~----------~~~iRis~~~~~t~edi~~~~~~l~~~ 386 (393)
T TIGR01822 349 T-GFFY-PVV---P-------------------KG----------QARIRVQISAAHTEEQLDRAVEAFTRI 386 (393)
T ss_pred e-eeCC-CCC---C-------------------CC----------CceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 7 5332 100 0 00 136999999999999999999999873
No 393
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=81.71 E-value=15 Score=42.76 Aligned_cols=168 Identities=14% Similarity=0.196 Sum_probs=96.9
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCc
Q 002866 201 DIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLK 280 (872)
Q Consensus 201 eARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~ 280 (872)
+.-++||+|+|+.. .|++..+-+.. ..++-+|. +.||-++..... +-++..=+++.+. ++.+ |..
T Consensus 143 dlE~~iakF~G~E~---aivYs~gF~ti-~S~ipafs-KrGDIi~~de~~-nfaIq~GlqlSRS---~i~~--Fkh---- 207 (467)
T KOG1358|consen 143 DLEKRIAKFMGTED---AIVYSYGFSTI-ESAIPAFS-KRGDIIFVDEAV-NFAIQKGLQLSRS---TISY--FKH---- 207 (467)
T ss_pred ccHHHHHHhhCCcc---eeeeccccchh-hhcchhhh-ccCcEEEEehhh-hHHHHHHHhhhhh---eeEE--ecC----
Confidence 45678999999954 48887765543 33444443 457666554221 1222211222222 2332 222
Q ss_pred cCHHHHHHHHhhhh-ccCCCC---C-ceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCC------C-Ccc
Q 002866 281 LCSTDLRKQISSKK-RRKKDS---A-AGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPK------D-MDS 347 (872)
Q Consensus 281 Id~edLe~~I~~~~-rr~~~~---~-T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~------~-mip 347 (872)
.++++|+.++.... +..+.+ . .+.+++-...-.+|.+.|+. +++...++...++||=+-+.|. . ...
T Consensus 208 ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH 287 (467)
T KOG1358|consen 208 NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEH 287 (467)
T ss_pred CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCcccccc
Confidence 36778876654332 111222 2 46778888888999999997 5677789999999997733221 0 013
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++++...+|.+++|.---++ +.|++.+-+..+...+
T Consensus 288 ~~v~~~~iDiv~~sm~~ala----s~GgFc~G~~~i~~hQ 323 (467)
T KOG1358|consen 288 FGVPITDIDIVTASMETALA----SGGGFCAGKSFIADHQ 323 (467)
T ss_pred CCCCccceeeeeeccccccc----ccCceeecceeeEeee
Confidence 45555678999999877655 3444444555543333
No 394
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=81.64 E-value=10 Score=41.55 Aligned_cols=87 Identities=15% Similarity=0.150 Sum_probs=60.0
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+++.+...|++.|.++ | | ++++.+ .|..|.|.+-+ +...+.+.+.++||.++
T Consensus 259 ~~~~~~~~~~~~~~l~~~L~~~--~------g---~~~~~~-----~g~~~~~~~~~------~~~~~~~~L~~~gI~v~ 316 (346)
T TIGR01141 259 IEKTVEEINAERERLYDGLKKL--P------G---LEVYPS-----DANFVLIRFPR------DADALFEALLEKGIIVR 316 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc--C------C---CEECCC-----cCCEEEEecCC------CHHHHHHHHHHCCeEEE
Confidence 6677788888888898888865 2 1 345543 57888888753 34556666667899998
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
.|.... + . -+.+|+|++ +.+|+.+|++-+
T Consensus 317 ~g~~f~-----------~----------------~---------~~~iRls~~---~~~~i~~~~~~l 345 (346)
T TIGR01141 317 DLNSYP-----------G----------------L---------PNCLRITVG---TREENDRFLAAL 345 (346)
T ss_pred eCCCcC-----------C----------------C---------CCeEEEecC---CHHHHHHHHHHh
Confidence 774210 0 0 137899976 899999998654
No 395
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=80.36 E-value=70 Score=37.74 Aligned_cols=93 Identities=12% Similarity=0.187 Sum_probs=53.7
Q ss_pred HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc-HHH---H-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCC
Q 002866 283 STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS-YQW---M-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFR 354 (872)
Q Consensus 283 ~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P-Le~---I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~ 354 (872)
.+.+++++.... ....+...|.+--+...-|.+.| -.. + +.|+++|+++++|=+|. .|.. +.-.+.-...
T Consensus 215 ~~~l~~~i~~~~--~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~ 292 (464)
T PRK06938 215 LHYLENLLDDPE--SGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGII 292 (464)
T ss_pred HHHHHHHHHhhc--cCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCC
Confidence 455666664311 01123555555556566688766 333 3 45689999999999975 3210 1112222357
Q ss_pred CcEEEEcccccCCC-CCCceEEEEEeCC
Q 002866 355 PDFIITSFYRVFGF-DPTGFGCLLIKKS 381 (872)
Q Consensus 355 ~DFlv~S~HK~fG~-~PtGvG~LyVRk~ 381 (872)
||.++++ |.+|+ =| +|+++.+++
T Consensus 293 PDiv~~g--KglggG~P--lsAv~~~~~ 316 (464)
T PRK06938 293 PDVVVLS--KAIGGSLP--LAVVVYREW 316 (464)
T ss_pred CCEEEee--ccccCCCc--eEEEeehhH
Confidence 9999984 65442 03 788888766
No 396
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=79.78 E-value=13 Score=41.86 Aligned_cols=107 Identities=10% Similarity=-0.005 Sum_probs=69.2
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCcccc---ceEEEEeccCCCCccChHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERG---AAVAFNVRDKERGLINPEV 768 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG---~~VAFNv~d~~G~~v~p~~ 768 (872)
.+++++...|...+..+.+-+. +|.+.|.+++. +++|.+.....+. ..|.|+... .| +++..
T Consensus 252 aAl~~~~~~~~~~~~~~~~~~~-~l~~~L~~i~g-----------~~~~~~~~~~~~~~~~~~v~~~~~~-~g--~~~~~ 316 (363)
T TIGR01437 252 AALEQYLSTGKESGAEMVAKLT-PFIEALNTLKG-----------VSASIVQDEAGRDIARAEIRFDESE-LG--MTAAD 316 (363)
T ss_pred HHHHHHHccCcccHHHHHHHHH-HHHHHHhcCCC-----------eEEEEecCCCCCcCceEEEEEeccC-CC--CCHHH
Confidence 4788888888888888887644 68889998864 5666432211121 458888742 11 78888
Q ss_pred HHHHHHHcC--CeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHH
Q 002866 769 VQKLAEKEG--ISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLW 846 (872)
Q Consensus 769 VqkLAdr~~--IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~ 846 (872)
+.+...+.+ |-.|. + . .+-+.|+.++.. .|.+|+++|.
T Consensus 317 l~~~L~~~~~~I~~r~----~------~-----------------------------~~~~~~~l~~~~-~~~~e~~~~~ 356 (363)
T TIGR01437 317 VVQALRQGEPAIYTRG----Y------K-----------------------------ANEGIIEIDPRS-VTGGQLDIIV 356 (363)
T ss_pred HHHHHhcCCCCEEEee----e------e-----------------------------ecCCeEEEEeec-CCHHHHHHHH
Confidence 877777666 44443 1 0 002355555554 4599999999
Q ss_pred HHHHHhc
Q 002866 847 AFVAKFL 853 (872)
Q Consensus 847 ~Fva~Fl 853 (872)
+.|.+++
T Consensus 357 ~~l~~~~ 363 (363)
T TIGR01437 357 ERIREIV 363 (363)
T ss_pred HHHHHhC
Confidence 9998753
No 397
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=79.08 E-value=59 Score=38.25 Aligned_cols=77 Identities=18% Similarity=0.275 Sum_probs=44.0
Q ss_pred CceEEEEeCccCcccchhcH-HH---H-HHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCC-CCC
Q 002866 301 AAGLFVFPVQSRVTGAKYSY-QW---M-ALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGF-DPT 371 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PL-e~---I-~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~-~Pt 371 (872)
+...|.+--+....|.+.|- +. + +.|+++|+++++|=+|. .|.. +.-...-...||.+++ =|-+|+ =|
T Consensus 225 ~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~--gK~l~gG~P- 301 (459)
T PRK06931 225 KPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVM--SKAVGGGLP- 301 (459)
T ss_pred ceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEe--cccccCCcc-
Confidence 35555554455556877663 33 3 45689999999999976 3210 1112222357999887 365432 03
Q ss_pred ceEEEEEeCC
Q 002866 372 GFGCLLIKKS 381 (872)
Q Consensus 372 GvG~LyVRk~ 381 (872)
+|++..++.
T Consensus 302 -i~av~~~~~ 310 (459)
T PRK06931 302 -LAVLGIKKE 310 (459)
T ss_pred -eeeeeeHHH
Confidence 455555543
No 398
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=78.79 E-value=6.9 Score=46.15 Aligned_cols=75 Identities=9% Similarity=-0.008 Sum_probs=59.9
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQK 771 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vqk 771 (872)
.+|+++...|+..+..|+..++++|...|.++. ++||++.. ..+-.+|.|+..+ |+...+++
T Consensus 302 aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G------------~~l~~~~t-~~hi~lv~~~~~g-----i~~~~~~~ 363 (475)
T PLN03226 302 VALKQAMTPEFKAYQKQVKANAAALANRLMSKG------------YKLVTGGT-DNHLVLWDLRPLG-----LTGSRVEK 363 (475)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCC------------CEEEcCCC-CCCEEEEEccCCC-----CCHHHHHH
Confidence 478999999999999999999999999998854 47777653 2455556665555 88999999
Q ss_pred HHHHcCCeEeecc
Q 002866 772 LAEKEGISLGIGF 784 (872)
Q Consensus 772 LAdr~~IsLr~G~ 784 (872)
.+++.||.+--++
T Consensus 364 ~L~~~~I~~nk~~ 376 (475)
T PLN03226 364 VLDLAHITLNKNA 376 (475)
T ss_pred HHHHCCCEECCCC
Confidence 9999999876665
No 399
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=77.78 E-value=14 Score=41.03 Aligned_cols=93 Identities=17% Similarity=0.204 Sum_probs=61.4
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+.+.+..+|...|..+. ++++ | ..|+.+.|.+-+ .++...+.+.+.++||.++
T Consensus 274 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~-~----~~g~~~~i~~~~----~~~~~~~~~~L~~~gI~v~ 332 (367)
T PRK02731 274 VEKSRALNAEGMAWLTEFLAELG------------LEYI-P----SVGNFILVDFDD----GKDAAEAYQALLKRGVIVR 332 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC------------CccC-C----CCceEEEEECCC----CCCHHHHHHHHHHCCEEEE
Confidence 44566677777778887777652 2333 2 248888888722 1344555555556899998
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
.|... + . .+.||+|+| +-+|+.+|++.+.+++++
T Consensus 333 ~~~~~------------~----------------~---------~~~iRis~~---~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 333 PVAGY------------G----------------L---------PNALRITIG---TEEENRRFLAALKEFLAA 366 (367)
T ss_pred eCCCC------------C----------------C---------CCeEEEecC---CHHHHHHHHHHHHHHHhc
Confidence 75211 0 0 137899986 789999999999998765
No 400
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=70.69 E-value=18 Score=41.11 Aligned_cols=106 Identities=14% Similarity=0.069 Sum_probs=66.2
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQK 771 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vqk 771 (872)
..|++++..+. ...+++...++|.+.|.++.. .++. .+++++.+-+-+ + .-...++++
T Consensus 290 aaL~~~~~~~~--~~~~~~~~~~~l~~~L~~~g~------------~~~~-----~~~~~~~i~~~~--~-~~~~~~~~~ 347 (410)
T PRK13392 290 AAIRHLKTSQT--ERDAHQDRVAALKAKLNANGI------------PVMP-----SPSHIVPVMVGD--P-TLCKAISDR 347 (410)
T ss_pred HHHHHHhcCHH--HHHHHHHHHHHHHHHHHHcCC------------CCCC-----CCCCEEEEEeCC--H-HHHHHHHHH
Confidence 35776666552 335566777888888887643 2222 245555444322 1 011345666
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
|.+++||.++.+..-. + +. +-..+|+|+.+..|.||+++|++.+.+
T Consensus 348 L~~~~GI~v~~~~~p~--~--------------------------~~------~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 348 LMSEHGIYIQPINYPT--V--------------------------PR------GTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred HHHhCCEEEeeeCCCC--C--------------------------CC------CCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 7778899888642111 0 00 124899999999999999999999988
Q ss_pred hc
Q 002866 852 FL 853 (872)
Q Consensus 852 Fl 853 (872)
++
T Consensus 394 ~~ 395 (410)
T PRK13392 394 IW 395 (410)
T ss_pred HH
Confidence 64
No 401
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=70.21 E-value=6.7 Score=44.14 Aligned_cols=79 Identities=22% Similarity=0.301 Sum_probs=45.9
Q ss_pred cccceEEEEeccCCCCccChHHHHHHHHHcCCe-Eeec------ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCC
Q 002866 747 ERGAAVAFNVRDKERGLINPEVVQKLAEKEGIS-LGIG------FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDG 819 (872)
Q Consensus 747 ~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~Is-Lr~G------~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~ 819 (872)
..|++|+|-|.+ ++..++++.++-.+- +++. ..+++....+... . + +.....|
T Consensus 283 g~g~i~s~~l~~------~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~----~--~----~~~~~~g---- 342 (369)
T cd00614 283 GYGGVFSFELKG------GLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQL----P--P----EERAAAG---- 342 (369)
T ss_pred CCceEEEEEeCC------CHHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccC----C--H----HHHHhcC----
Confidence 359999999863 467788898876653 3332 2222221111100 0 0 0000112
Q ss_pred CCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 820 KGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 820 ~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
+..+.||.|+|+ ||++.||+=+.+-|
T Consensus 343 ----~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 343 ----ITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred ----CCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 225799999999 99999998777643
No 402
>PRK07582 cystathionine gamma-lyase; Validated
Probab=69.64 E-value=25 Score=39.76 Aligned_cols=118 Identities=14% Similarity=0.138 Sum_probs=69.3
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEEEe
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAFNV 756 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAFNv 756 (872)
+..|||..++ +.|..++...+.|.+||-. ||. +-++|=|... ...|++|+|.+
T Consensus 235 l~~r~l~tl~-~R~~~~~~na~~la~~L~~------~p~--------v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~ 299 (366)
T PRK07582 235 LAHRSLGTLG-LRFARQCANALAVAELLAG------HPA--------VRGVRYPGLPGDPAHEVAARQMRRFGGLVSFEL 299 (366)
T ss_pred HHHhccccHH-HHHHHHHHHHHHHHHHHHh------CCC--------ccEEECCCCCCCccHHHHHhhCCCCcceEEEEe
Confidence 6677888654 6788899999999999873 432 1234422211 13699999999
Q ss_pred ccCCCCccChHHHHHHHHHcCCeE-eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccc
Q 002866 757 RDKERGLINPEVVQKLAEKEGISL-GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGF 835 (872)
Q Consensus 757 ~d~~G~~v~p~~VqkLAdr~~IsL-r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~ 835 (872)
. ++..+.++.++.+|-. ++.+-..-.....+ ... + ..++-+.||+|+|+
T Consensus 300 ~-------~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~----------------~~~-~------~~~~~~liR~svGl 349 (366)
T PRK07582 300 A-------DAAAAERFVAASRLVVAATSFGGVHTSADRR----------------ARW-G------DAVPEGFVRLSCGI 349 (366)
T ss_pred C-------CHHHHHHHHHhCCcceecccCCCccchhhhH----------------HHc-C------CCCCCCeEEEEecc
Confidence 4 3678889999777633 22211100000000 000 1 00224699999999
Q ss_pred cCCHHHHHHHHHHHHH
Q 002866 836 LTNFEDVYKLWAFVAK 851 (872)
Q Consensus 836 lSnFEDVyrl~~Fva~ 851 (872)
-+.-+.+..|.+.+.+
T Consensus 350 E~~~dli~dl~~al~~ 365 (366)
T PRK07582 350 EDTDDLVADLERALDA 365 (366)
T ss_pred CCHHHHHHHHHHHHhh
Confidence 7766666666666543
No 403
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=69.31 E-value=28 Score=37.29 Aligned_cols=95 Identities=19% Similarity=0.126 Sum_probs=68.6
Q ss_pred hcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCe
Q 002866 700 LGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGIS 779 (872)
Q Consensus 700 lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~Is 779 (872)
-++..+..+.+.+.++|...|.++... .+ + ...+|..+.|.+-+. .....+++++.+.||-
T Consensus 255 ~~~~~~~~~~~~~~~~l~~~L~~~~~~---------~~--~----~~~~g~~~~~~~~~~----~~~~~~~~~l~~~gi~ 315 (350)
T cd00609 255 EHLEELRERYRRRRDALLEALKELGPL---------VV--V----KPSGGFFLWLDLPEG----DDEEFLERLLLEAGVV 315 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCc---------cc--c----CCCccEEEEEecCCC----ChHHHHHHHHHhCCEE
Confidence 357788888899999999888876541 11 1 235677777776552 4677889999999999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHH
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVA 850 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva 850 (872)
++.+..... .+ -..||++++.. .||++++++.|.
T Consensus 316 i~~~~~~~~-------------------------~~----------~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 316 VRPGSAFGE-------------------------GG----------EGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred Eeccccccc-------------------------CC----------CCeEEEEeeCC--HHHHHHHHHHhh
Confidence 887644321 00 23899999999 999999998774
No 404
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=67.88 E-value=46 Score=38.68 Aligned_cols=202 Identities=15% Similarity=0.125 Sum_probs=112.4
Q ss_pred ceecc---cCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHH
Q 002866 150 KVCLD---YCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRG 226 (872)
Q Consensus 150 ~IYLD---yAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnAT 226 (872)
.||.| -.||+-++..|..+++.. ...|+...+ ....+..+-+.||.. | ++=|.-+.
T Consensus 46 dv~IDLLTDSGTgams~~qwaamm~G--------------DEAYagsrs---~~~L~~avkdifGfq---~-~iPthQGR 104 (471)
T COG3033 46 DVFIDLLTDSGTGAMTDKQWAAMMRG--------------DEAYAGSRS---YYALADAVKDIFGFQ---Y-TIPTHQGR 104 (471)
T ss_pred ceEEEeeccCCcccccHHHHHHHhcc--------------chhhccccc---HHHHHHHHHHhcCce---e-eeeccCCc
Confidence 55554 578888988887765421 123433322 345556666777862 2 55676666
Q ss_pred HHHHHHHhhC----CCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC---------CCccCHHHHHHHHhhh
Q 002866 227 SAFKLLAESY----PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP---------TLKLCSTDLRKQISSK 293 (872)
Q Consensus 227 eALnLVaesl----pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p---------~g~Id~edLe~~I~~~ 293 (872)
.|=|++..-+ ...+|+..+....++-... +.-.+..|+.++-++++.. -|.+|.+.|+++|..-
T Consensus 105 gAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTT---r~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidev 181 (471)
T COG3033 105 GAENILIPILIKKGEQEPGSKMVAFSNYHFDTT---RGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEV 181 (471)
T ss_pred cHHHHHHHHHhhhccccCCccccccccceecch---hHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHh
Confidence 6666554432 1234555443323221211 1223456777776665432 1568999999999753
Q ss_pred hccCCCCCceEEEEeCccCc-ccchhcHHHH----HHHHHCCcEEEeeccccCCCCCccCCC-----CC-----------
Q 002866 294 KRRKKDSAAGLFVFPVQSRV-TGAKYSYQWM----ALAQQNHWHVLLDAGSLGPKDMDSLGL-----SL----------- 352 (872)
Q Consensus 294 ~rr~~~~~T~LVa~p~vSNv-TG~i~PLe~I----~~Are~G~~VLVDAAQ~aG~~mipLDL-----s~----------- 352 (872)
...+.-.++++--+|. -|+-.+++-+ +.|+++++.|++|+|-++-.. .-+.- .+
T Consensus 182 ----G~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENa-YFIk~rE~gYrd~sI~~IarEm~ 256 (471)
T COG3033 182 ----GADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENA-YFIKQREPGYRDWSIEEIAREMY 256 (471)
T ss_pred ----CcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhh-hhhhhcCcccccccHHHHHHHHH
Confidence 1123445555555553 4444444433 357899999999999654320 01111 11
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 353 FRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
.-+|-++.|+-|=.-. +. -|+|..|.+.
T Consensus 257 sYaD~~~mS~KKD~lv-nm-GGfl~~~D~~ 284 (471)
T COG3033 257 SYADGCTMSAKKDGLV-NM-GGFLCFKDDS 284 (471)
T ss_pred hhhhhheeecccccee-cc-ccEEEecCcc
Confidence 2489999999994333 32 2566777763
No 405
>PRK06108 aspartate aminotransferase; Provisional
Probab=67.36 E-value=29 Score=38.51 Aligned_cols=96 Identities=17% Similarity=0.154 Sum_probs=61.4
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEee
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI 782 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~ 782 (872)
..+..|++.+..+|++.|.++.. ++++.|. -|..+-+.+-+. .-...++++|++++||.++.
T Consensus 285 ~~~~~~~~~~~~~l~~~L~~~~~-----------~~~~~p~----~g~~~~~~l~~~---~~~~~~~~~ll~~~gV~v~p 346 (382)
T PRK06108 285 AELVARLRRSRDHLVDALRALPG-----------VEVAKPD----GAMYAFFRIPGV---TDSLALAKRLVDEAGLGLAP 346 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC-----------CcccCCC----eeEEEEEeCCCC---CCHHHHHHHHHHhCCEEEeC
Confidence 45667788888888888877632 4556552 233344444321 11235667788889999987
Q ss_pred cccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 783 GFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 783 G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
|....+. +.+.||+|++. +-+++.+.++-+.+|+
T Consensus 347 g~~f~~~-----------------------------------~~~~~Ris~~~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 347 GTAFGPG-----------------------------------GEGFLRWCFAR--DPARLDEAVERLRRFL 380 (382)
T ss_pred chhhCCC-----------------------------------CCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 7432110 02389999998 7888888888777765
No 406
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=66.77 E-value=45 Score=36.93 Aligned_cols=91 Identities=18% Similarity=0.180 Sum_probs=60.7
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+.....+.+....+|+..|..+. | ++++ | ..|..+.+.+- +...+.+++.++||.++
T Consensus 266 ~~~~~~~~~~~~~~l~~~L~~~~--------~---~~~~-~----~~~~~~~~~~~-------~~~~~~~~l~~~gI~v~ 322 (356)
T PRK04870 266 LDAQAAQLRAERTRLAAALAALP--------G---VTVF-P----SAANFILVRVP-------DAAAVFDGLKTRGVLVK 322 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--------C---cEEC-C----CCCeEEEEECC-------CHHHHHHHHHHCCEEEE
Confidence 34555666777778888887652 1 3444 2 34667777653 34667777889999998
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.|..... . ..+.||+|+| +-+|+.+|++.+.++|
T Consensus 323 ~~~~f~~---------------------------~--------~~~~iRis~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 323 NLSGMHP---------------------------L--------LANCLRVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred ECCCCCC---------------------------C--------CCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence 7632210 0 0237999998 7899999999998753
No 407
>PLN02483 serine palmitoyltransferase
Probab=66.37 E-value=27 Score=41.34 Aligned_cols=94 Identities=12% Similarity=0.193 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEee-ccc
Q 002866 707 CRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI-GFL 785 (872)
Q Consensus 707 ~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~-G~l 785 (872)
.+++...++|++.|.++. +.+||+ ..+|++.+=+++.. . .+...++|+ ++||.+.. ||.
T Consensus 372 ~~l~~~~~~l~~~L~~~G------------~~v~~~----~~sp~~~l~l~~~~--~-~~~~~~~Ll-~~GI~v~~~~fp 431 (489)
T PLN02483 372 AQIRENSNFFRSELQKMG------------FEVLGD----NDSPVMPIMLYNPA--K-IPAFSRECL-KQNVAVVVVGFP 431 (489)
T ss_pred HHHHHHHHHHHHHHHHCC------------CcccCC----CCCCEEEEEECCHH--H-HHHHHHHHH-HCCcEEeeeCCC
Confidence 467777788888888763 356765 34577776665421 1 234556655 46888873 232
Q ss_pred ccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 786 SHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 786 ~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
+.+. ..+.||+++.+..|.||++++++-+.++++.
T Consensus 432 ~~p~-----------------------------------~~~~vRi~isa~~t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 432 ATPL-----------------------------------LLARARICISASHSREDLIKALEVISEVGDL 466 (489)
T ss_pred CCCC-----------------------------------CCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 2110 0247999999999999999999999987653
No 408
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=65.68 E-value=1.9e+02 Score=36.91 Aligned_cols=83 Identities=13% Similarity=0.153 Sum_probs=50.2
Q ss_pred ceEEEE-eCccCcccchhcH----HHH-HHHHHCCcEEEeeccccC-CCC--CccCCCCCCCCcEEEEcccccCCCCCCc
Q 002866 302 AGLFVF-PVQSRVTGAKYSY----QWM-ALAQQNHWHVLLDAGSLG-PKD--MDSLGLSLFRPDFIITSFYRVFGFDPTG 372 (872)
Q Consensus 302 T~LVa~-p~vSNvTG~i~PL----e~I-~~Are~G~~VLVDAAQ~a-G~~--mipLDLs~l~~DFlv~S~HK~fG~~PtG 372 (872)
..-|.+ |.+...-|.+.|= +.+ +.|+++|+++++|=++.+ |.. |.-.+.-...||+++++ |.+++.=.=
T Consensus 585 iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~g--KgLtgG~~P 662 (817)
T PLN02974 585 IAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYA--KLLTGGLVP 662 (817)
T ss_pred EEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeec--ccccCCCCc
Confidence 444444 4345667888763 223 467899999999999752 210 12222334569998875 765530001
Q ss_pred eEEEEEeCCCcccc
Q 002866 373 FGCLLIKKSVMGSL 386 (872)
Q Consensus 373 vG~LyVRk~~i~~L 386 (872)
+|++++++++.+.+
T Consensus 663 laa~l~~~~I~~~f 676 (817)
T PLN02974 663 LAATLATEEVFEAF 676 (817)
T ss_pred cEEEEEcHHHHHhh
Confidence 78888888876544
No 409
>PRK06225 aspartate aminotransferase; Provisional
Probab=65.23 E-value=34 Score=38.32 Aligned_cols=97 Identities=11% Similarity=0.104 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeecc
Q 002866 705 TTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIGF 784 (872)
Q Consensus 705 I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G~ 784 (872)
+....+-...++...|..+.. . .+.+|.+ .|..+.+.+.+. .++...+++.+.++||.++.|.
T Consensus 279 ~~~~~~~~~~~l~~~L~~~~~--------~-~~~~~~~-----~g~~~~~~~~~~---~~~~~~l~~~l~~~gi~v~~g~ 341 (380)
T PRK06225 279 IRRTTFKNQKLIKEAVDEIEG--------V-FLPVYPS-----HGNMMVIDISEA---GIDPEDLVEYLLERKIFVRQGT 341 (380)
T ss_pred HHHHHHHHHHHHHHHHHhCcC--------C-ccccCCC-----CCeEEEEEcccc---cCCHHHHHHHHHHCCEEEcCCc
Confidence 333344445667777776532 0 0222322 356666655431 1566666666668999999885
Q ss_pred cccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 785 LSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 785 l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.+... . +.+.||+|++. +-||+.++++.+.+.++
T Consensus 342 ~~~~~----~------------------------------~~~~iR~s~~~--~~e~l~~~~~~l~~~~~ 375 (380)
T PRK06225 342 YTSKR----F------------------------------GDRYIRVSFSI--PREQVEVFCEEFPDVVE 375 (380)
T ss_pred ccCcC----C------------------------------CCceEEEEeCC--CHHHHHHHHHHHHHHHH
Confidence 33110 0 02478999875 68999999998887554
No 410
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=64.85 E-value=42 Score=40.32 Aligned_cols=52 Identities=8% Similarity=-0.046 Sum_probs=44.2
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEecc
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRD 758 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d 758 (872)
-.|+++...|+..+-.|...|.+|+...|.+... ++||+|. +-++|+|.+.-
T Consensus 388 ~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~-----------~el~~~p----~l~iv~Fr~~p 439 (522)
T TIGR03799 388 AGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPD-----------FELVTEP----ELCLLTYRYVP 439 (522)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCC-----------eEEecCC----CccEEEEEEeC
Confidence 3688889999999999999999999999987664 8999974 44699999754
No 411
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=63.61 E-value=35 Score=39.36 Aligned_cols=105 Identities=12% Similarity=0.129 Sum_probs=66.1
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
+......|+..++.+|.+.|.++.. +++ +|. ...+++-+-+-+. -+.+..+++...++||.+
T Consensus 283 ~~~~~~~~l~~~a~~l~~~L~~~G~---------~~~---~~~---~~t~i~~v~~~~~---~~~~~~~~~~L~~~GI~v 344 (416)
T PRK13034 283 EFKTYAKQVIANAQALAEVLKERGY---------DLV---SGG---TDNHLLLVDLRPK---GLSGKDAEQALERAGITV 344 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCC---------Eec---cCC---CCCcEEEEEcCCC---CCCHHHHHHHHHhCCcEE
Confidence 3345568999999999999987632 222 221 2355555444331 157788877778788877
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCC----HHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTN----FEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSn----FEDVyrl~~Fva~Fld 854 (872)
..=..-. +.. .+ . ....+|+|+-++|+ .+||.++++.|++-+.
T Consensus 345 ~~~~~p~----~~~---------------------~p-----~-~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 345 NKNTVPG----DTE---------------------SP-----F-VTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred eccCCCC----CCc---------------------CC-----C-CCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 5311110 000 00 0 03479999999888 9999999999998443
No 412
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=62.85 E-value=27 Score=38.87 Aligned_cols=113 Identities=14% Similarity=0.125 Sum_probs=80.2
Q ss_pred CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCC-CeEEEec-ccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHH
Q 002866 211 NIPENEYGLVFTVSRGSAFKLLAESYPFHTN-KKLLTMF-DYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRK 288 (872)
Q Consensus 211 gA~~dEY~VVFTsnATeALnLVaeslpf~~G-d~ILT~~-DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~ 288 (872)
+..++ .|-..-|+-|.+.++++..- -+| ++|+.+. .|.-=+| .|+-.+++|+.+|... +..++.+.+.+
T Consensus 83 pLt~d--nic~GvGsDE~ID~iiR~~c-~PGkeKIl~cPPtysMY~v-----~A~iNd~eVvkvpl~p-dF~lnvdai~e 153 (375)
T KOG0633|consen 83 PLTSD--NICVGVGSDELIDLIIRCVC-DPGKEKILDCPPTYSMYVV-----DAAINDAEVVKVPLNP-DFSLNVDAIAE 153 (375)
T ss_pred CCCcc--ceEEecCcHHHHHHHHhhee-cCCccceeecCCcceeEEE-----EeecCCceEEEecCCC-CccccHHHHHH
Confidence 44444 47778899999999998753 467 4565331 1110011 1344689999999864 67888899988
Q ss_pred HHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHHHHHC--CcEEEeecc
Q 002866 289 QISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQN--HWHVLLDAG 338 (872)
Q Consensus 289 ~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~--G~~VLVDAA 338 (872)
.+.. ++..+++-++.-.|.||.+.-.+.|...-++ +..|+||-|
T Consensus 154 vl~~------ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEA 199 (375)
T KOG0633|consen 154 VLEL------DSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEA 199 (375)
T ss_pred HHhc------cccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeee
Confidence 8863 4568999999999999999999877666443 578888877
No 413
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=62.79 E-value=36 Score=38.19 Aligned_cols=118 Identities=10% Similarity=0.026 Sum_probs=71.9
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC---ccccceEEEEeccCCCCccChHHHHHHHHHcCC
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK---YERGAAVAFNVRDKERGLINPEVVQKLAEKEGI 778 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~---~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~I 778 (872)
++.+..|-+-+..++...|..+.. +++|.+... .....+|.|+.- +| ++...|.+...++||
T Consensus 257 l~~~~~~r~~~~~~~~~~L~~~~~-----------~~~~~~~~~~~~~~~~~~i~~~~~--~~--~~r~~l~~~L~~~gI 321 (380)
T TIGR03588 257 LDRFVAKRREIAARYDRLLKDLPY-----------FTPLTIPLGSKSAWHLYPILLDQE--FG--CTRKEVFEALRAAGI 321 (380)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCC-----------ccCCCCCCCCEeEEEEEEEEECCc--CC--CCHHHHHHHHHHCCC
Confidence 588889999999999999988754 455554211 112223444321 22 566666666678899
Q ss_pred eEeeccccc---ccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 779 SLGIGFLSH---IRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 779 sLr~G~l~~---i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.++..+... +.+...+. . ...+... .+--.+|+..++..-|.+||+++++.|.+||
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~----------~-~~~p~a~--------~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 322 GVQVHYIPVHLQPYYRQGFG----------D-GDLPSAE--------NFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CcccCCcccccChhhhccCC----------c-CCCcHHH--------HHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 999775331 11111000 0 0001000 0112489999999999999999999999875
No 414
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=61.55 E-value=50 Score=36.68 Aligned_cols=96 Identities=11% Similarity=0.066 Sum_probs=61.0
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEee
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI 782 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~ 782 (872)
..+..+.+.+.+++++.|..+.. .++.| .|+++.+.+.+ + .-...++++|+++ ||.+..
T Consensus 296 ~~~~~~~~~~~~~l~~~L~~~~~------------~~~~~-----~~~~~~~~~~~--~-~~~~~~~~~L~~~-gI~v~~ 354 (397)
T PRK06939 296 DELRDRLWENARYFREGMTAAGF------------TLGPG-----EHPIIPVMLGD--A-KLAQEFADRLLEE-GVYVIG 354 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC------------CcCCC-----CCCEEEEEECC--H-HHHHHHHHHHHHC-CceEee
Confidence 45677888889999999987643 11222 34555544422 1 1123456666665 999874
Q ss_pred cccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 783 GFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 783 G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
+.... . . .+ ...||++++++.+.+|+.++++-|.+++
T Consensus 355 ~~~~~------~---------~---------~~----------~~~iRi~~~~~~~~~~i~~~l~~L~~~~ 391 (397)
T PRK06939 355 FSFPV------V---------P---------KG----------QARIRTQMSAAHTKEQLDRAIDAFEKVG 391 (397)
T ss_pred eCCCC------C---------C---------CC----------CceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 32110 0 0 00 2379999999999999999999998865
No 415
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=60.45 E-value=41 Score=38.11 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=68.6
Q ss_pred eechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHH
Q 002866 690 ICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVV 769 (872)
Q Consensus 690 ~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~V 769 (872)
.+..|+.++.- .+..|++.+.+++.+.|.+|.++ ++.-+ .-+|+++++-+-+.....-...++
T Consensus 296 a~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~~~---------~~~~~-----~g~g~~~~i~~~~~~~~~~~~~l~ 358 (401)
T TIGR01885 296 AVAALEVLEEE---KLAENAEKLGEIFRDQLKKLPKP---------IITEV-----RGRGLLNAIVIDESKTGRTAWDLC 358 (401)
T ss_pred HHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhccCC---------ceeEE-----eecCeeEEEEeccCcchhHHHHHH
Confidence 34556665543 45678999999999999999762 22111 136888887664432111223344
Q ss_pred HHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 770 QKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 770 qkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
++| .++||-+..+ . ..++|.+.-+..+.+||+++++-+
T Consensus 359 ~~l-~~~Gv~v~~~--------------------------------~---------~~~lRi~p~l~~t~~~i~~~l~~l 396 (401)
T TIGR01885 359 LKL-KEKGLLAKPT--------------------------------H---------GNIIRLAPPLVITEEQLDEGLEII 396 (401)
T ss_pred HHH-HhCCEEEEec--------------------------------C---------CCEEEEeCCccCCHHHHHHHHHHH
Confidence 444 3557665210 0 127899998999999999999999
Q ss_pred HHhcC
Q 002866 850 AKFLN 854 (872)
Q Consensus 850 a~Fld 854 (872)
.+++|
T Consensus 397 ~~~l~ 401 (401)
T TIGR01885 397 KKVID 401 (401)
T ss_pred HHHhC
Confidence 99886
No 416
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=59.16 E-value=50 Score=40.82 Aligned_cols=159 Identities=21% Similarity=0.183 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~ 276 (872)
.+-.-..-|+++.|.+-.. --+..-+|.|-..++-++.-.++.++++... .|+-.+ -++..++..|++|...+
T Consensus 164 sllNyQTmi~dlTGL~~aN--ASLLDEgTAaaEAm~l~~~~~krkk~vvd~~-~hpqtlsV~~TRa~~~~i~v~~~~--- 237 (1001)
T KOG2040|consen 164 SLLNYQTMITDLTGLPMAN--ASLLDEGTAAAEAMALCNRINKRKKFVVDSN-CHPQTLSVVKTRAKGFGIKVVVSD--- 237 (1001)
T ss_pred HHhhhHHhhhhccCCcccc--hhhhccchhHHHHHHHHHhhcccceEEecCC-CCcchhhhhhccccccceeEEecC---
Confidence 3344566788888886443 2233444555444444444445666666543 344333 33444555566654322
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
..+. -.. .+.-...||-+| +.-|.+.|+. .++.|+++|.+|++ |+-++... +-=.-.++++
T Consensus 238 ------~~~~---~~s----~~~v~gvlvQYP---~t~G~i~d~~el~~~a~~~~s~vv~-atDLLaLt-iLrpPgefGa 299 (1001)
T KOG2040|consen 238 ------IKEA---DYS----SKDVSGVLVQYP---DTEGSVLDFDELVELAHANGSLVVM-ATDLLALT-ILRPPGEFGA 299 (1001)
T ss_pred ------HHHh---hcc----ccceeEEEEEcC---CCCCcccCHHHHHHHhhccCceEEE-eehhhHHH-ccCChhhcCc
Confidence 1111 110 011123345454 4579999997 57788999988654 33333221 1112346899
Q ss_pred cEEEEcccccCCCCCCc-----eEEEEEeCCC
Q 002866 356 DFIITSFYRVFGFDPTG-----FGCLLIKKSV 382 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtG-----vG~LyVRk~~ 382 (872)
|..+.|...+ |- |.| .|++.++.++
T Consensus 300 DIavGSsQRF-GV-PlGYGGPHAaFfAv~~~l 329 (1001)
T KOG2040|consen 300 DIAVGSSQRF-GV-PLGYGGPHAAFFAVSESL 329 (1001)
T ss_pred eeeecccccc-Cc-cccCCCchHHHHHHHHHH
Confidence 9999999995 44 444 4556666543
No 417
>PLN02822 serine palmitoyltransferase
Probab=57.99 E-value=75 Score=37.59 Aligned_cols=113 Identities=10% Similarity=0.048 Sum_probs=72.9
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCc-----cChH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGL-----INPE 767 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~-----v~p~ 767 (872)
+|++++. ...+..+++.+++++...|.++.. +.+.+| ..++++-+.+-+..+.. ..-.
T Consensus 359 aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g-----------~~~~~~----~~spi~~l~l~~~~~~~~~~~~~~~~ 421 (481)
T PLN02822 359 AIDVLED--NPSVLAKLKENIALLHKGLSDIPG-----------LSIGSN----TLSPIVFLHLEKSTGSAKEDLSLLEH 421 (481)
T ss_pred HHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCC-----------cccCCC----CCCCEEEEEeCCCcccccchHHHHHH
Confidence 4555543 256778899999999999988642 233332 35777777775432221 2245
Q ss_pred HHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHH
Q 002866 768 VVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWA 847 (872)
Q Consensus 768 ~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~ 847 (872)
++++|++++||-+..+.... +.+ +.. ...+|+++.+..|.||+.++++
T Consensus 422 ~~~~Ll~e~GV~v~~~~~~~--~~~----------------------~~~--------~~~lRi~is~~~t~edI~~~~~ 469 (481)
T PLN02822 422 IADRMLKEDSVLVVVSKRST--LDK----------------------CRL--------PVGIRLFVSAGHTESDILKASE 469 (481)
T ss_pred HHHHHHhcCCEEEEeeCCCC--cCC----------------------CCC--------CCcEEEEECCCCCHHHHHHHHH
Confidence 77888877788877653321 100 000 1269999999999999999999
Q ss_pred HHHHhcC
Q 002866 848 FVAKFLN 854 (872)
Q Consensus 848 Fva~Fld 854 (872)
-+.+++.
T Consensus 470 ~l~~~~~ 476 (481)
T PLN02822 470 SLKRVAA 476 (481)
T ss_pred HHHHHHH
Confidence 9988653
No 418
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=57.71 E-value=92 Score=35.13 Aligned_cols=96 Identities=14% Similarity=0.074 Sum_probs=64.0
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcC
Q 002866 698 NMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEG 777 (872)
Q Consensus 698 d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~ 777 (872)
+.+.-..+..|++.+.++|.+.|.++.||. +.-. ..+|..+.+-+.+ + ....+.+.+-++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~---------~~~v-----~g~g~~~~i~~~~-~----~~~~~~~~l~~~G 357 (398)
T PRK03244 297 DTIASEGLLENAERLGEQLRAGIEALGHPL---------VDHV-----RGRGLLLGIVLTA-P----VAKAVEAAAREAG 357 (398)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHhcCCCc---------eeeE-----eeccEEEEEEEec-c----HHHHHHHHHHHCC
Confidence 333334567899999999999999987741 1100 1267777777632 1 2333444445567
Q ss_pred CeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 778 ISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 778 IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
|-++... ..++|++..+..|.+|++++++-+.+.+
T Consensus 358 v~~~~~~-----------------------------------------~~~iR~~p~~~~t~~~i~~~~~~l~~~l 392 (398)
T PRK03244 358 FLVNAVA-----------------------------------------PDVIRLAPPLIITDAQVDAFVAALPAIL 392 (398)
T ss_pred eEEeecC-----------------------------------------CCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 7665410 1289999999999999999999998855
No 419
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=56.76 E-value=54 Score=36.46 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=59.7
Q ss_pred hhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeec
Q 002866 704 KTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIG 783 (872)
Q Consensus 704 ~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G 783 (872)
.+..|++.+.++|.+.|.++.. ++|.| .++++.+.+... .-.-.+.++|+++ ||-++.+
T Consensus 285 ~~~~~~~~~~~~l~~~L~~~g~------------~~~~~-----~~~~~~~~~~~~---~~~~~~~~~L~~~-gi~v~~~ 343 (385)
T TIGR01825 285 ELMERLWDNTRFFKAGLGKLGY------------DTGGS-----ETPITPVVIGDE---KAAQEFSRRLFDE-GIFAQSI 343 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC------------CCCCC-----CCCEEEEEECCH---HHHHHHHHHHHHC-CcEEccc
Confidence 3556677778888888877632 33443 345677664321 1112345566655 9987643
Q ss_pred ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 784 FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 784 ~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
..... . . +...||+++.+..+-||++++++-+.+++
T Consensus 344 ~~~~~-----~---------------------~--------~~~~iRi~~~~~~~~e~i~~~~~~l~~~~ 379 (385)
T TIGR01825 344 VFPTV-----P---------------------R--------GTARIRNIPTAEHTKDDLDQALDAYEKVG 379 (385)
T ss_pred CCCCC-----C---------------------C--------CCceEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 22100 0 0 12489999999999999999999998865
No 420
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=56.76 E-value=75 Score=36.06 Aligned_cols=106 Identities=9% Similarity=0.040 Sum_probs=67.3
Q ss_pred hcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCe
Q 002866 700 LGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGIS 779 (872)
Q Consensus 700 lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~Is 779 (872)
-++.....|.+.+..++...|.++. ++++. .......+.+.+-+. -+....+.+++.+.||.
T Consensus 279 ~~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~---~~~~~~~~~i~~~~~---~~~~~~~~~~L~~~GI~ 340 (416)
T PRK00011 279 PEFKEYAQQVVKNAKALAEALAERG------------FRVVS---GGTDNHLVLVDLRSK---GLTGKEAEAALEEANIT 340 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCC------------Ceeee---cCCCCeEEEEeCccc---CCCHHHHHHHHHHcCcE
Confidence 3677888999999999999998753 34442 112457777877432 24556677777888999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccC----CHHHHHHHHHHHHHhcC
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLT----NFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lS----nFEDVyrl~~Fva~Fld 854 (872)
++.++.... ....+ . ...+|++...++ |.+||+++++.+.+++.
T Consensus 341 v~~~~~p~~-~~~~~---------------------~---------~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 341 VNKNAVPFD-PRSPF---------------------V---------TSGIRIGTPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred EccCcCCCC-CCCCC---------------------C---------CCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 987653210 00000 0 114565443333 58999999999999654
No 421
>PRK06460 hypothetical protein; Provisional
Probab=56.24 E-value=17 Score=41.31 Aligned_cols=25 Identities=28% Similarity=0.353 Sum_probs=20.7
Q ss_pred eeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 826 VEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 826 ~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
-+.||.|.|+ ||++-||+=+.+-|+
T Consensus 349 ~~liR~svGl----E~~~dl~~dl~~al~ 373 (376)
T PRK06460 349 DSLLRLSVGI----EDVNDLIEDLDRALS 373 (376)
T ss_pred CCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 5689999998 889889888777554
No 422
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=56.07 E-value=94 Score=35.85 Aligned_cols=83 Identities=19% Similarity=0.248 Sum_probs=54.3
Q ss_pred chhhhhhhh-cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccce-EEEEeccCCCCcc--C--
Q 002866 692 RHLDHINML-GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAA-VAFNVRDKERGLI--N-- 765 (872)
Q Consensus 692 ~gLdh~d~l-Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~-VAFNv~d~~G~~v--~-- 765 (872)
+.|+.+... ||+++-.|-+.+.+.|+..|.+|.- +.++... +..|.++ ++|.+.+..-.-+ +
T Consensus 250 ~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~-----------l~~~~~~-~~~rS~tvt~v~~~~~~~~~~~~~~~ 317 (374)
T TIGR01365 250 DALKWAESIGGLKPLIARADDNLAVLEAFVAKNNW-----------IHFLAET-PEIRSNTSVCLKVVDPAIDALDEDAQ 317 (374)
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCC-----------cccCCCC-hhhcCCCeEEEEeCCccccccccchh
Confidence 345555676 7999999999999999999999872 2334322 2346664 4476643210001 2
Q ss_pred ---hHHHHHHHHHcCCeEeecccc
Q 002866 766 ---PEVVQKLAEKEGISLGIGFLS 786 (872)
Q Consensus 766 ---p~~VqkLAdr~~IsLr~G~l~ 786 (872)
...+.+.+.++||.|..|...
T Consensus 318 ~~~~~~~~~~l~~~gi~i~~G~~~ 341 (374)
T TIGR01365 318 ADFAKELISTLEKEGVAYDIGSYR 341 (374)
T ss_pred hHHHHHHHHHHHHCCEEEeccccc
Confidence 456777777779999888654
No 423
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=55.60 E-value=54 Score=36.78 Aligned_cols=104 Identities=14% Similarity=0.063 Sum_probs=68.3
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEE-EEeCCCCCccccceEEEEeccCCCC----ccCh
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLV-HIYGPKIKYERGAAVAFNVRDKERG----LINP 766 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV-~IYGp~~~~~RG~~VAFNv~d~~G~----~v~p 766 (872)
..|+.++. ..+..|++.+.++|.+.|..+... .+++ .+ ..+|+++.|.+.+..+. ....
T Consensus 304 a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~-------~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~ 367 (413)
T cd00610 304 AVLEVLEE---EGLLENAAELGEYLRERLRELAEK-------HPLVGDV------RGRGLMIGIELVKDRATKPPDKELA 367 (413)
T ss_pred HHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh-------CCcEEEe------ecCceEEEEEEecCCCcCCcchHHH
Confidence 34666655 457789999999999999887541 0111 11 35789999998764221 0222
Q ss_pred HHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHH
Q 002866 767 EVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLW 846 (872)
Q Consensus 767 ~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~ 846 (872)
..+.+.+.++||.+..|. ..++|.++.+..|.+|+++++
T Consensus 368 ~~~~~~l~~~gv~v~~~~-----------------------------------------~~~lR~~~~~~~t~~~i~~~~ 406 (413)
T cd00610 368 AKIIKAALERGLLLRPSG-----------------------------------------GNVIRLLPPLIITEEEIDEGL 406 (413)
T ss_pred HHHHHHHHHCCeEEeecC-----------------------------------------CCEEEEECCCcCCHHHHHHHH
Confidence 334444445676664431 127899999999999999999
Q ss_pred HHHHHh
Q 002866 847 AFVAKF 852 (872)
Q Consensus 847 ~Fva~F 852 (872)
+-+.+.
T Consensus 407 ~~l~~~ 412 (413)
T cd00610 407 DALDEA 412 (413)
T ss_pred HHHHHh
Confidence 988764
No 424
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=55.07 E-value=81 Score=35.41 Aligned_cols=114 Identities=16% Similarity=0.106 Sum_probs=73.9
Q ss_pred hhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEe-CCCCCccccceEEEEeccCCCCccChHHHHHH
Q 002866 694 LDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIY-GPKIKYERGAAVAFNVRDKERGLINPEVVQKL 772 (872)
Q Consensus 694 Ldh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IY-Gp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkL 772 (872)
+.++..-++.....+.+.+.++|...|.++. +.++ .| ..+..|.+.+-+. | .....++++
T Consensus 269 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~----~~~~~v~v~~~~~-~--~~~~~~~~~ 329 (402)
T cd00378 269 LKEALEPEFKAYAKQVVENAKALAEALKERG------------FKVVSGG----TDNHLVLVDLRPK-G--ITGKAAEDA 329 (402)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC------------CeEeecC----CCCeEEEEeCCcc-C--CCHHHHHHH
Confidence 4433333556677778888889998888752 3444 23 3467777776532 2 345677788
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccC----CHHHHHHHHHH
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLT----NFEDVYKLWAF 848 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lS----nFEDVyrl~~F 848 (872)
+.++||.++.+.. |.. .. + ..+...+|+++..++ +.+||+.+.+.
T Consensus 330 l~~~gI~v~~~~~--p~~--~~----~-----------------------~~~~~~lRi~~~~~~~~~~~~~di~~~~~~ 378 (402)
T cd00378 330 LEEAGITVNKNTL--PWD--PS----S-----------------------PFVPSGIRIGTPAMTTRGMGEEEMEEIADF 378 (402)
T ss_pred HHHcCcEEcCCcC--CCC--CC----C-----------------------CCCCCeeEecCHHHHHhCCCHHHHHHHHHH
Confidence 8899999987533 210 00 0 001248999999988 69999999999
Q ss_pred HHHhcCccc
Q 002866 849 VAKFLNPAF 857 (872)
Q Consensus 849 va~Fld~~f 857 (872)
+.+.+..+.
T Consensus 379 l~~~~~~~~ 387 (402)
T cd00378 379 IARALKDAE 387 (402)
T ss_pred HHHHHhccc
Confidence 999665544
No 425
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=53.27 E-value=44 Score=38.90 Aligned_cols=121 Identities=13% Similarity=0.227 Sum_probs=65.8
Q ss_pred eeechhhhhhhhc--chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC-----------cc--ccceEE
Q 002866 689 IICRHLDHINMLG--LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK-----------YE--RGAAVA 753 (872)
Q Consensus 689 i~c~gLdh~d~lG--l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~-----------~~--RG~~VA 753 (872)
+..|||. .|. |...+.-...|.+||-. ||. +.++|=|... .. -|+.|+
T Consensus 279 l~lrgl~---tl~~R~~~~~~na~~la~~L~~------~p~--------v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s 341 (425)
T PRK06084 279 LILQGLE---TLALRMERHTENALKVARYLQQ------HPQ--------VAWVKYAGLPDHPEHELARRYMGGKPASILS 341 (425)
T ss_pred HHHcCcC---cHHHHHHHHHHHHHHHHHHHHh------CCC--------ccEEECCCCCCcccHHHHHHhCCCCcceEEE
Confidence 5556666 455 56666667777777763 431 2344544321 12 378999
Q ss_pred EEeccCCCCccChHHHHHHHHHcCC-eEee--c----ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccce
Q 002866 754 FNVRDKERGLINPEVVQKLAEKEGI-SLGI--G----FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRV 826 (872)
Q Consensus 754 FNv~d~~G~~v~p~~VqkLAdr~~I-sLr~--G----~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~ 826 (872)
|.|.+ +...+.++.++-.+ .+.+ | ..|+|....++.... + .....| +.-
T Consensus 342 ~~~~~------~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~-----~-----~~~~~g--------i~~ 397 (425)
T PRK06084 342 FGIKG------GQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLND-----E-----ELEKAG--------VSR 397 (425)
T ss_pred EEecC------CHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCH-----H-----HHHhcC--------CCC
Confidence 99974 24456777776552 2222 2 223332111111000 0 000122 235
Q ss_pred eEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 827 EVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 827 gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.||.|+|+ ||++-||+=+.+-|+
T Consensus 398 ~liR~svGl----Ed~~dLi~dl~~Al~ 421 (425)
T PRK06084 398 DMVRLSIGI----EHIDDIIADLAQALD 421 (425)
T ss_pred CeEEEEecc----CCHHHHHHHHHHHHH
Confidence 799999998 899999887777554
No 426
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=51.81 E-value=82 Score=36.45 Aligned_cols=105 Identities=24% Similarity=0.269 Sum_probs=71.3
Q ss_pred hhhhhhhhc-chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCC-Cccccc-eEEEEeccCCCCccChHHH
Q 002866 693 HLDHINMLG-LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKI-KYERGA-AVAFNVRDKERGLINPEVV 769 (872)
Q Consensus 693 gLdh~d~lG-l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~-~~~RG~-~VAFNv~d~~G~~v~p~~V 769 (872)
.++|+..+| +..+..|.+.=..-||.-+.+=.. |-+.+ +..|.- -|.|.+.| .-++...|
T Consensus 255 v~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~f--------------y~~~v~~~~RS~mnV~f~~~~---~~ld~~fv 317 (365)
T COG1932 255 VFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDF--------------YRNLVAKANRSRMNVTFTLVD---AELDKGFV 317 (365)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCc--------------cccccchhhccceeEEEEcCc---HHHHHHHH
Confidence 589999999 999999998877777766654322 22222 244443 47888875 33666666
Q ss_pred HHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 770 QKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 770 qkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
+++..+ |...=.| | +- +|-.|||++---..|||.+|.+|+
T Consensus 318 ~eae~~-gl~~lkG---h----------------------------r~--------vgGmRasiynA~~~e~veaL~~fm 357 (365)
T COG1932 318 AEAEAA-GLIYLKG---H----------------------------RS--------VGGLRASIYNAVPLEDVEALTDFM 357 (365)
T ss_pred HHHHHc-CCceecc---c----------------------------cC--------CCceeeeeecCCCHHHHHHHHHHH
Confidence 665543 3222222 1 00 446999999999999999999999
Q ss_pred HHhcC
Q 002866 850 AKFLN 854 (872)
Q Consensus 850 a~Fld 854 (872)
..|..
T Consensus 358 ~~f~~ 362 (365)
T COG1932 358 DWFEE 362 (365)
T ss_pred HHHHH
Confidence 99753
No 427
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=51.68 E-value=23 Score=40.50 Aligned_cols=132 Identities=15% Similarity=0.243 Sum_probs=64.5
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHH--HHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVT--SLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP 766 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~--~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p 766 (872)
+.+++|+.+... |.......+.|.+||-. ......||.-.+.-+..+.+=| ...-|+.++|-+.+ | .
T Consensus 248 l~l~~L~tl~~r-~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~----~~~~g~~~s~~~~~--~----~ 316 (391)
T TIGR01328 248 LILRGLKTLNIR-MKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQ----MRMGGGMITFELKG--G----F 316 (391)
T ss_pred HHHhCcCcHHHH-HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHh----CCCCCceEEEEeCC--C----H
Confidence 455666665544 56666667777777642 1112222221110000000000 01128999999863 2 4
Q ss_pred HHHHHHHHHcCCe-Eeec------ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCH
Q 002866 767 EVVQKLAEKEGIS-LGIG------FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNF 839 (872)
Q Consensus 767 ~~VqkLAdr~~Is-Lr~G------~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnF 839 (872)
..+.++.++-.+- +++. ..+||.-..++.. +.. ..+...+.-+.||.|.|+
T Consensus 317 ~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~--------------~~~----~~~~~gi~~~liR~svGl---- 374 (391)
T TIGR01328 317 AGAKKLLNNLKLIRLAVSLGDAETLIQHPASMTHAVV--------------PKE----EREAAGITDGMIRLSVGL---- 374 (391)
T ss_pred HHHHHHHHhCCcceEecCCCCCcccCcCCCccccccC--------------CHH----HHHhcCCCCCeEEEEeCc----
Confidence 5677888866542 3332 1222221111100 000 000112236789999998
Q ss_pred HHHHHHHHHHHHhc
Q 002866 840 EDVYKLWAFVAKFL 853 (872)
Q Consensus 840 EDVyrl~~Fva~Fl 853 (872)
||++-||+=+.+-|
T Consensus 375 E~~~dl~~dl~~al 388 (391)
T TIGR01328 375 EDADDLIADLKQAL 388 (391)
T ss_pred CCHHHHHHHHHHHH
Confidence 89999988777644
No 428
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=51.57 E-value=1.1e+02 Score=34.24 Aligned_cols=19 Identities=11% Similarity=0.273 Sum_probs=16.8
Q ss_pred EEEEeccccCCHHHHHHHHHHH
Q 002866 828 VVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 828 vVrASLG~lSnFEDVyrl~~Fv 849 (872)
.||+|+| +.||..+|++.+
T Consensus 332 ~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 332 CLRITIG---TREECQRVIDAL 350 (351)
T ss_pred eEEEeCC---CHHHHHHHHHhh
Confidence 7899999 679999999875
No 429
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=50.76 E-value=28 Score=39.80 Aligned_cols=123 Identities=18% Similarity=0.246 Sum_probs=70.5
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEEEe
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAFNV 756 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAFNv 756 (872)
+..|||+.+..- |..+..-...|.+||-. ||. +-+||=|.-. .--|+.|+|-|
T Consensus 239 l~lr~l~tl~~R-~~~~~~na~~~a~~L~~------~p~--------v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~ 303 (382)
T TIGR02080 239 LTLRGLRTLVAR-MRLQQRNAQAIVEYLQT------QPL--------VKKIYYPGLPDHPGHEIAARQQKGFGAMLSFEL 303 (382)
T ss_pred HHHcccchHHHH-HHHHHHHHHHHHHHHHh------CCC--------eeEEECCCCCCCccHHHHHhhCCCCCceEEEEe
Confidence 557778766665 88888888899999872 431 1244444321 12489999999
Q ss_pred ccCCCCccChHHHHHHHHHcCC-eEee--c----ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEE
Q 002866 757 RDKERGLINPEVVQKLAEKEGI-SLGI--G----FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVV 829 (872)
Q Consensus 757 ~d~~G~~v~p~~VqkLAdr~~I-sLr~--G----~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvV 829 (872)
.+ +...+.++.++-.+ .+++ | ..++|.-..++.. ... ..+...+..+.|
T Consensus 304 ~~------~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~--------------~~~----~~~~~gi~~~li 359 (382)
T TIGR02080 304 KG------GEQTVRRFLGGLSLFTLAESLGGVESLIAHPATMTHAAM--------------GPE----ARAEAGISDTLL 359 (382)
T ss_pred cC------cHHHHHHHHHcCCcceEeccCCCCcceeECCCccCcccC--------------CHH----HHHhcCCCcCeE
Confidence 63 24567777775554 3333 2 1112211111100 000 001122236799
Q ss_pred EEeccccCCHHHHHHHHHHHHHhcC
Q 002866 830 TASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 830 rASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
|.|.|+ ||+.-||+=+.+-|+
T Consensus 360 RlsvGl----E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 360 RLSVGL----EDADDLIADLEQGLR 380 (382)
T ss_pred EEEecc----CCHHHHHHHHHHHHh
Confidence 999998 888888887776443
No 430
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=50.20 E-value=96 Score=34.84 Aligned_cols=84 Identities=17% Similarity=0.222 Sum_probs=52.7
Q ss_pred HHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCC----CCcc-ChHHHHHHHHHcCCe-Eeecccc
Q 002866 713 INWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKE----RGLI-NPEVVQKLAEKEGIS-LGIGFLS 786 (872)
Q Consensus 713 ~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~----G~~v-~p~~VqkLAdr~~Is-Lr~G~l~ 786 (872)
.+||...|.++. +.+|++.. ...++|.|++-... |..- ...+.++|.+ +||. +|
T Consensus 277 ~~~l~~~L~~~g------------~~~~~~~~--s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e-~GI~~ir----- 336 (370)
T TIGR02539 277 TRWFVAELEDIG------------FIQLGQKP--KEHDLVKFETPGFHEIAQKHKRRGYFLYEELKK-RGIHGIR----- 336 (370)
T ss_pred HHHHHHHHHhCC------------cEEEccCC--CcCceEEEECCchhHHhhhhccccHHHHHHHHh-CCCcccc-----
Confidence 678999998875 46776543 36888888863210 1111 1234555554 5883 22
Q ss_pred cccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 787 HIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 787 ~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
+ + . -+.+|+|+ +.-+.||+.+|++.+.+++
T Consensus 337 -------~----~----------------~---------~~~iRis~-~~~t~e~i~~l~~~L~~~~ 366 (370)
T TIGR02539 337 -------S----G----------------Q---------TKYFKLSV-YGLTKEQVEYVVDSFEEIV 366 (370)
T ss_pred -------C----C----------------c---------ceEEEEEe-cCCCHHHHHHHHHHHHHHH
Confidence 0 0 0 13789997 3459999999999999865
No 431
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=49.72 E-value=1.3e+02 Score=34.18 Aligned_cols=98 Identities=13% Similarity=0.126 Sum_probs=63.6
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQK 771 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vqk 771 (872)
..|+.++. ..+..|++.+.++|...|.+|.+|. + ++ -.-+|..+.+.+.+ + .-.++++
T Consensus 298 aaL~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~---------i---~~--~~~~g~~~~~~~~~-~----~~~~~~~ 355 (396)
T PRK04073 298 AALEVLEE---EKLPERSLELGEYFKEQLKEIDNPM---------I---KE--VRGRGLFIGVELNE-P----ARPYCEA 355 (396)
T ss_pred HHHHHHHh---cCHHHHHHHHHHHHHHHHHhhcCCc---------c---cc--eecceEEEEEEecc-h----HHHHHHH
Confidence 34554443 3355788888999999999987631 2 11 12357778877643 1 1234445
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
|. ++||.++. + + -.+||++.-+..|.||++++++-+.+
T Consensus 356 l~-~~Gv~~~~---~----------------------------~----------~~~iRi~p~l~~t~e~i~~~~~~l~~ 393 (396)
T PRK04073 356 LK-EEGLLCKE---T----------------------------H----------ETVIRFAPPLVITKEELDWAFEKIKA 393 (396)
T ss_pred HH-HCCeEEec---C----------------------------C----------CCEEEEECCcccCHHHHHHHHHHHHH
Confidence 44 45666531 0 0 13899999999999999999999988
Q ss_pred hc
Q 002866 852 FL 853 (872)
Q Consensus 852 Fl 853 (872)
++
T Consensus 394 ~l 395 (396)
T PRK04073 394 VL 395 (396)
T ss_pred Hh
Confidence 65
No 432
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=49.51 E-value=56 Score=37.67 Aligned_cols=122 Identities=16% Similarity=0.239 Sum_probs=68.7
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEEEe
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAFNV 756 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAFNv 756 (872)
+..|||..+. +=|...+.-...|++||- .||. +-+||=|.-. ..-|+.|+|.|
T Consensus 241 l~~rgl~Tl~-lR~~~~~~~a~~~a~~L~------~~p~--------v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~ 305 (388)
T PRK08861 241 MTLRGIRTLG-ARMRVHEESAQQILAYLQ------TQSL--------VGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEF 305 (388)
T ss_pred HHHhcCCCHH-HHHHHHHHHHHHHHHHHH------hCCC--------eeEEECCCCCCCchHHHHHHhCCCCCceEEEEe
Confidence 6667777331 227788888889999987 4542 2345544311 23589999999
Q ss_pred ccCCCCccChHHHHHHHHHcCC-eEee--c----ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEE
Q 002866 757 RDKERGLINPEVVQKLAEKEGI-SLGI--G----FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVV 829 (872)
Q Consensus 757 ~d~~G~~v~p~~VqkLAdr~~I-sLr~--G----~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvV 829 (872)
.+ +...+.++.++-.+ .+++ | ..+||....+.... .......| +.-+.|
T Consensus 306 ~~------~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~----------~~~~~~~g--------i~~~li 361 (388)
T PRK08861 306 AG------SFEQLKVFVKALALFSLAESLGGVESLICHPASMTHRAMG----------EEALAEAG--------VSQQLL 361 (388)
T ss_pred CC------CHHHHHHHHhcCCcceEccCCCCCcceeeCCCcccccccC----------HHHHHhcC--------CCCCeE
Confidence 63 25667888886554 3333 2 11222211111100 00000112 235699
Q ss_pred EEeccccCCHHHHHHHHHHHHHhc
Q 002866 830 TASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 830 rASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
|.|.|+ ||++-||+=+.+-|
T Consensus 362 RlsvGl----E~~~dli~Dl~~al 381 (388)
T PRK08861 362 RLSVGL----EDAQDLIADLDQAF 381 (388)
T ss_pred EEEeCc----CCHHHHHHHHHHHH
Confidence 999998 77877777666633
No 433
>PLN02509 cystathionine beta-lyase
Probab=49.41 E-value=28 Score=41.19 Aligned_cols=27 Identities=26% Similarity=0.271 Sum_probs=22.3
Q ss_pred eeEEEEeccccCCHHHHHHHHHHHHHhcCcc
Q 002866 826 VEVVTASLGFLTNFEDVYKLWAFVAKFLNPA 856 (872)
Q Consensus 826 ~gvVrASLG~lSnFEDVyrl~~Fva~Fld~~ 856 (872)
-+.||.|+|+ ||++-||+=+.+-|+.+
T Consensus 436 ~~liRlSvGl----E~~~DLi~Dl~~Al~~~ 462 (464)
T PLN02509 436 EDLVRISAGI----EDVDDLISDLDIAFRTG 462 (464)
T ss_pred CCeEEEEecc----CCHHHHHHHHHHHHccc
Confidence 6799999998 89999998888766543
No 434
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=48.36 E-value=1.2e+02 Score=33.23 Aligned_cols=89 Identities=15% Similarity=0.144 Sum_probs=54.7
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEee
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI 782 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~ 782 (872)
..+..+++...++|++.|.++. ++++. ..|..+-+.+-+ ++...+.+.+.++||.++.
T Consensus 263 ~~~~~~~~~~~~~l~~~L~~~g------------~~~~~-----~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~ 320 (353)
T PRK05387 263 EETRAKVIATRERLVEELEALG------------FEVLP-----SKANFVFARHPS-----HDAAELAAKLRERGIIVRH 320 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC------------CeECC-----CcCcEEEEECCC-----CCHHHHHHHHHHCCEEEEE
Confidence 3455566666777887777642 23442 235666555432 3555555555778999862
Q ss_pred cccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 783 GFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 783 G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
++.+ . . -+.||+|+| +.+|+.++++.+.+.+
T Consensus 321 --~~~~------~--------------------~---------~~~iRis~~---~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 321 --FNKP------R--------------------I---------DQFLRITIG---TDEEMEALVDALKEIL 351 (353)
T ss_pred --CCCC------C--------------------C---------CCeEEEEeC---CHHHHHHHHHHHHHHh
Confidence 1110 0 0 137899987 6799999999998753
No 435
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=47.94 E-value=1.3e+02 Score=33.22 Aligned_cols=24 Identities=17% Similarity=0.419 Sum_probs=20.2
Q ss_pred eEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 827 EVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 827 gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
+.||+|++ +.+|+.+|++.+.+.+
T Consensus 337 ~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 337 YYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred CeEEEECC---CHHHHHHHHHHHHHHh
Confidence 37999988 7889999999998744
No 436
>PRK07671 cystathionine beta-lyase; Provisional
Probab=46.80 E-value=81 Score=35.99 Aligned_cols=118 Identities=22% Similarity=0.317 Sum_probs=66.9
Q ss_pred eeechhhhhhhhc--chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEE
Q 002866 689 IICRHLDHINMLG--LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAF 754 (872)
Q Consensus 689 i~c~gLdh~d~lG--l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAF 754 (872)
+..||+. .|+ |..++...+.|.+||-. ||. +.++|-|... .--|+.++|
T Consensus 237 l~~~~l~---tl~~R~~~~~~na~~la~~L~~------~~~--------v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~ 299 (377)
T PRK07671 237 LLLRGLK---TLGIRMEEHETNSRAIAEFLNN------HPA--------VNKVYYPGLPSHPNHELAKEQANGFGGMISF 299 (377)
T ss_pred HHHcCcC---hHHHHHHHHHHHHHHHHHHHHc------CCC--------eeEEECCCCCCCccHHHHHhhCCCCCceEEE
Confidence 4455655 455 77888888899998863 431 3355655422 123899999
Q ss_pred EeccCCCCccChHHHHHHHHHcCC-eEee--cc----cccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCcccee
Q 002866 755 NVRDKERGLINPEVVQKLAEKEGI-SLGI--GF----LSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVE 827 (872)
Q Consensus 755 Nv~d~~G~~v~p~~VqkLAdr~~I-sLr~--G~----l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~g 827 (872)
.+ + | ...+.++.++-.+ .+++ |. .|++....++.... + .....|. .-+
T Consensus 300 ~~-~--~----~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~-----~-----~~~~~gi--------~~~ 354 (377)
T PRK07671 300 DV-G--S----EETANKVLERLQYFTLAESLGAVESLISIPSQMTHASIPA-----D-----RRKELGI--------TDG 354 (377)
T ss_pred Ee-C--C----HHHHHHHHHhCCcceEccCCCCCCeEeECCCccccccCCH-----H-----HHHhcCC--------CCC
Confidence 88 3 2 4667788776654 2233 31 22332111111000 0 0001222 357
Q ss_pred EEEEeccccCCHHHHHHHHHHHHHh
Q 002866 828 VVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 828 vVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
.||.|+|+ ||+.-||+=+.+-
T Consensus 355 liR~svGl----E~~~dl~~dl~~a 375 (377)
T PRK07671 355 LIRISVGI----EDGEDLIEDLAQA 375 (377)
T ss_pred eEEEEecc----CCHHHHHHHHHHH
Confidence 99999998 8898888877653
No 437
>PRK05968 hypothetical protein; Provisional
Probab=46.48 E-value=65 Score=36.87 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=20.8
Q ss_pred cccceEEEEeccCCCCccChHHHHHHHH---HcCCeEeeccccc
Q 002866 747 ERGAAVAFNVRDKERGLINPEVVQKLAE---KEGISLGIGFLSH 787 (872)
Q Consensus 747 ~RG~~VAFNv~d~~G~~v~p~~VqkLAd---r~~IsLr~G~l~~ 787 (872)
..|++|+|++.+ |. . ..++++ ..+|..+.|..+.
T Consensus 300 g~g~~~sf~~~~--~~--~---~~~f~~~L~~~~~~~s~G~~~s 336 (389)
T PRK05968 300 GTSGLFSFIFRE--GI--D---VRAFADALKLFRLGVSWGGHES 336 (389)
T ss_pred CCceEEEEEECC--HH--H---HHHHHHhCCccEEecCCCCCCc
Confidence 468899999874 32 2 334444 4555677775554
No 438
>PRK05939 hypothetical protein; Provisional
Probab=46.16 E-value=91 Score=35.98 Aligned_cols=120 Identities=14% Similarity=0.138 Sum_probs=68.3
Q ss_pred eeechhhhhhhhc--chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEE
Q 002866 689 IICRHLDHINMLG--LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAF 754 (872)
Q Consensus 689 i~c~gLdh~d~lG--l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAF 754 (872)
+.+|||. .|. |..++.-...|.+||-. ||. +-+||=|.-. ..-|+.|+|
T Consensus 255 l~~rgl~---tl~~R~~~~~~na~~la~~L~~------~p~--------V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf 317 (397)
T PRK05939 255 RIAIGAE---TLALRVDRSCSNALALAQFLEA------HPK--------VARVYYPGLASHPQHARATELFRHYGGLLSF 317 (397)
T ss_pred HHHcCcC---cHHHHHHHHHHHHHHHHHHHHh------CCC--------ccEEECCCCCCCchHHHHHHhccCCceEEEE
Confidence 4556766 444 77788888889999874 442 1234434311 245999999
Q ss_pred EeccCCCCccChHHHHHHHHHcCC-eEeec------ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCcccee
Q 002866 755 NVRDKERGLINPEVVQKLAEKEGI-SLGIG------FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVE 827 (872)
Q Consensus 755 Nv~d~~G~~v~p~~VqkLAdr~~I-sLr~G------~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~g 827 (872)
.+.+ +..+.++.++-.+ .+++. ..+||.-..+... +. ...+...+..+
T Consensus 318 ~~~~-------~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~--------------~~----~~~~~~gi~~~ 372 (397)
T PRK05939 318 ELAD-------GIDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEM--------------GA----ERRASMGIADS 372 (397)
T ss_pred EeCC-------HHHHHHHHHhCCcceEccCCCCCCeeeecCcccccccC--------------CH----HHHHhcCCCCC
Confidence 9974 2356788886664 33332 1122211111100 00 00011222357
Q ss_pred EEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 828 VVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 828 vVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.||.|.|+ ||++-||+=+.+-|+
T Consensus 373 lvR~svGl----Ed~~dLi~dl~~Al~ 395 (397)
T PRK05939 373 LIRVSVGI----EDEADLIADFEQALD 395 (397)
T ss_pred eEEEEeCC----CCHHHHHHHHHHHHh
Confidence 89999998 888888887777554
No 439
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=45.79 E-value=1.1e+02 Score=35.47 Aligned_cols=106 Identities=19% Similarity=0.253 Sum_probs=76.7
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKL 772 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkL 772 (872)
+||-...++|..+.+|-=.|+++.+.-+-.... ..-++|-+|.....||+=|+|--- ..+..+|.|
T Consensus 295 aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~--------~~~l~l~tPr~~~~rGsqvS~~hp------~~~~V~qaL 360 (407)
T COG3844 295 ALDIFADVDITELRKKSLALTDYFIELVEARCE--------YYGLTLVTPRAHEERGSQVSLYHP------HGYQVMQAL 360 (407)
T ss_pred hhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccc--------cCCcEEeccchhhhccceeeEecC------cHHHHHHHH
Confidence 789888999999999999999887754444433 123788999999999999999643 467777777
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEecc-ccCCHHHHHHHHHHHHH
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLG-FLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG-~lSnFEDVyrl~~Fva~ 851 (872)
-++ || |.| + |+ ..|+|..+- +|++|+|||.-++-+..
T Consensus 361 i~r-GV-----------igD-~---------------------R~--------P~vlRfgftPlY~~~~DVw~AV~~L~e 398 (407)
T COG3844 361 IDR-GV-----------IGD-F---------------------RE--------PDVLRFGFTPLYVSFVDVWDAVDALEE 398 (407)
T ss_pred HHc-Cc-----------ccc-c---------------------cC--------CCeeeecCccceechhHHHHHHHHHHH
Confidence 661 11 000 0 11 456666554 58999999999999988
Q ss_pred hcC
Q 002866 852 FLN 854 (872)
Q Consensus 852 Fld 854 (872)
-||
T Consensus 399 vL~ 401 (407)
T COG3844 399 VLD 401 (407)
T ss_pred HHH
Confidence 655
No 440
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=42.94 E-value=46 Score=38.07 Aligned_cols=123 Identities=17% Similarity=0.294 Sum_probs=66.7
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEEEe
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAFNV 756 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAFNv 756 (872)
+.++|++.++.- |...+.+.+.|.+||-. ||. +-++|=|.-. ..-|+.|+|.+
T Consensus 248 ~~l~gl~tl~~R-~~~~~~~a~~la~~L~~------~p~--------v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l 312 (390)
T PRK08133 248 VFLKGLETLSLR-MEAHSANALALAEWLEA------HPG--------VERVFYPGLPSHPQHELAKRQQKGGGAIVSFEV 312 (390)
T ss_pred HHHcccchHHHH-HHHHHHHHHHHHHHHHh------CCC--------eeEEECCCCCCCccHHHHHHhCCCCceEEEEEE
Confidence 344666633322 56677777788887763 331 2234444311 23489999999
Q ss_pred ccCCCCccChHHHHHHHHHcCCe-Eeec------ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEE
Q 002866 757 RDKERGLINPEVVQKLAEKEGIS-LGIG------FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVV 829 (872)
Q Consensus 757 ~d~~G~~v~p~~VqkLAdr~~Is-Lr~G------~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvV 829 (872)
.+ +...+.++.++-.+- +++. ..++|....++.... + .... ..+.-+.|
T Consensus 313 ~~------~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~-----~-----~~~~--------~gi~~~li 368 (390)
T PRK08133 313 KG------GREAAWRVIDATRLISITANLGDTKTTITHPATTTHGRLSP-----E-----ARAA--------AGITEGLI 368 (390)
T ss_pred cC------CHHHHHHHHHhCCcceEeccCCCcceeeecCCCCCcccCCH-----H-----HHHh--------cCCCCCeE
Confidence 53 356677888765542 3332 222332211111000 0 0001 12235699
Q ss_pred EEeccccCCHHHHHHHHHHHHHhcC
Q 002866 830 TASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 830 rASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
|.|+|+ ||++-||+=+.+-|+
T Consensus 369 R~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 369 RVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred EEEeCc----CCHHHHHHHHHHHhh
Confidence 999998 899999887776554
No 441
>PRK07049 methionine gamma-lyase; Validated
Probab=42.63 E-value=45 Score=38.79 Aligned_cols=133 Identities=17% Similarity=0.256 Sum_probs=68.1
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHH--HHhcccCCCC--CCCCCceEEEEeCCCCCccccceEEEEeccCCCCcc
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVT--SLLQLRFSDS--DGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLI 764 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~--~L~~LrHp~~--~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v 764 (872)
+.+|+|+++. +=|...+.+...|.+||-. ...+..||.- .+..+..+. ... ..--|+.|+|-|.+
T Consensus 282 l~~r~L~tl~-~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~---~~~-~~g~g~~~s~~~~~------ 350 (427)
T PRK07049 282 MLGRSLETLV-LRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVY---KRQ-CTGAGSTFSFDIKG------ 350 (427)
T ss_pred HHHcCCChHH-HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHH---Hhh-CCCCccEEEEEEcC------
Confidence 5667777552 2277778888888888763 1223333310 100000000 000 01238999999964
Q ss_pred ChHHHHHHHHHcCC-eEee--c----ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccC
Q 002866 765 NPEVVQKLAEKEGI-SLGI--G----FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLT 837 (872)
Q Consensus 765 ~p~~VqkLAdr~~I-sLr~--G----~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lS 837 (872)
+...+.++.++-++ .+++ | ..+++....++.... + .....| +.-+.||.|+|+
T Consensus 351 ~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~-----~-----~~~~~g--------i~~~liR~svGl-- 410 (427)
T PRK07049 351 GQAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPA-----D-----VRERIG--------VLESTIRLSIGI-- 410 (427)
T ss_pred CHHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCH-----H-----HHHhcC--------CCcCeEEEEeCc--
Confidence 24557777775554 2222 2 122232111111000 0 000122 235689999998
Q ss_pred CHHHHHHHHHHHHHhcC
Q 002866 838 NFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 838 nFEDVyrl~~Fva~Fld 854 (872)
||++-||+=+.+-|+
T Consensus 411 --E~~~dl~~dl~~al~ 425 (427)
T PRK07049 411 --EHPDDLIADLAQALD 425 (427)
T ss_pred --CCHHHHHHHHHHHHh
Confidence 899999988877665
No 442
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=41.78 E-value=1.5e+02 Score=34.09 Aligned_cols=142 Identities=14% Similarity=0.240 Sum_probs=78.4
Q ss_pred eCCHHHHHHHHHhhCC-CCCCCeEEEec-cc-CchhHHHHHHHHHHcC-cEEEEEec-cCCCCccCHHHHHHHHhhhhcc
Q 002866 222 TVSRGSAFKLLAESYP-FHTNKKLLTMF-DY-ESQSVNWMAQSAKEKG-AKVYSAWF-KWPTLKLCSTDLRKQISSKKRR 296 (872)
Q Consensus 222 TsnATeALnLVaeslp-f~~Gd~ILT~~-Dh-EHnSVl~~~~~AkrkG-aeV~~Vpv-d~p~g~Id~edLe~~I~~~~rr 296 (872)
+-++|.|+.+.++-+. |-....++++. .. .|.. ..++.| .+|..-+. +...-.+|.+.+...|..
T Consensus 105 slsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~------if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~---- 174 (410)
T KOG1412|consen 105 SLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHA------IFEKAGFTTVATYPYWDAENKCVDLEGFLSDLES---- 174 (410)
T ss_pred eccccchhhhhHHHHHHhcccceeEecCCchhHHHH------HHHHcCCceeeeeeeecCCCceecHHHHHHHHhh----
Confidence 3577889888777653 22222333321 11 1222 235567 34443333 122235677777666653
Q ss_pred CCCCCceEEEEeCc-cCcccchhcHH-HHHHH---HHCCcEEEeecc-ccCCCCCccCCCCCC--------CC-cEEEEc
Q 002866 297 KKDSAAGLFVFPVQ-SRVTGAKYSYQ-WMALA---QQNHWHVLLDAG-SLGPKDMDSLGLSLF--------RP-DFIITS 361 (872)
Q Consensus 297 ~~~~~T~LVa~p~v-SNvTG~i~PLe-~I~~A---re~G~~VLVDAA-Q~aG~~mipLDLs~l--------~~-DFlv~S 361 (872)
.|...++.+.++ .|.||.-..=+ |..+| ++.+...+.|-| |.... -++|-..+ +. =|++=|
T Consensus 175 --APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfAS--GD~~~DawAiR~fV~~g~e~fv~QS 250 (410)
T KOG1412|consen 175 --APEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFAS--GDLDADAWAIRYFVEQGFELFVCQS 250 (410)
T ss_pred --CCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhccccc--CCccccHHHHHHHHhcCCeEEEEhh
Confidence 234556666555 79999766654 86654 567778888988 65443 24443322 33 356668
Q ss_pred ccccCC-CCCCceEEEEE
Q 002866 362 FYRVFG-FDPTGFGCLLI 378 (872)
Q Consensus 362 ~HK~fG-~~PtGvG~LyV 378 (872)
|-|-|| |+ .-+|+|-|
T Consensus 251 FaKNfGlYn-eRvGnltv 267 (410)
T KOG1412|consen 251 FAKNFGLYN-ERVGNLTV 267 (410)
T ss_pred hhhhccccc-ccccceEE
Confidence 999766 42 34666643
No 443
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=40.96 E-value=58 Score=37.22 Aligned_cols=24 Identities=38% Similarity=0.437 Sum_probs=18.8
Q ss_pred eeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 826 VEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 826 ~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
-+.||.|+|+ ||+.-||+=+.+-|
T Consensus 363 ~~liR~svGl----E~~~dl~~dl~~al 386 (388)
T PRK07811 363 DDLVRLSVGI----EDVADLLADLEQAL 386 (388)
T ss_pred CCEEEEEeCC----CCHHHHHHHHHHHh
Confidence 5699999998 78888877666644
No 444
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=40.93 E-value=2.4e+02 Score=31.39 Aligned_cols=85 Identities=18% Similarity=0.208 Sum_probs=52.3
Q ss_pred HHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEecc----CC-CCccChHHHHHHHHHcCCeEeecccc
Q 002866 712 LINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRD----KE-RGLINPEVVQKLAEKEGISLGIGFLS 786 (872)
Q Consensus 712 L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d----~~-G~~v~p~~VqkLAdr~~IsLr~G~l~ 786 (872)
..+||+..|.+|.. +++|++.. .+.+++.|++-+ .. +..-...+.++|.+ +||.+
T Consensus 269 ~~~~l~~~L~~l~g-----------~~v~~~~~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~------ 328 (361)
T cd06452 269 KARWFVAELEKIEG-----------IKQLGEKP--KNHDLMFFETPSFDEIAKKHKRRGYFLYSELKK-RGIHG------ 328 (361)
T ss_pred HHHHHHHHHhcCCC-----------eEEECCCC--CCCceEEEEcCCcchhhhhccccchhHHHHHHH-cCceE------
Confidence 45899999988864 78887542 366777777631 00 11112346666655 58862
Q ss_pred cccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEec-cccCCHHHHHHHHHHHHHh
Q 002866 787 HIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASL-GFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 787 ~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASL-G~lSnFEDVyrl~~Fva~F 852 (872)
. + . + . -.++|++. | -+.||+++|++.+...
T Consensus 329 ~--~---~----~----------------~---------~~~~ri~~~g--~~~e~~~~l~~al~~~ 359 (361)
T cd06452 329 I--K---P----G----------------L---------TRYFKLSTYG--LTWEQVEYVVDAFKEI 359 (361)
T ss_pred E--c---C----C----------------C---------ceEEEEEecC--CCHHHHHHHHHHHHHH
Confidence 0 0 0 0 0 12667766 5 5889999999998764
No 445
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=40.90 E-value=1.6e+02 Score=31.94 Aligned_cols=25 Identities=24% Similarity=0.069 Sum_probs=22.1
Q ss_pred eEEEEeccccCCHHHHHHHHHHHHH
Q 002866 827 EVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 827 gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
.+||+++++.++-||++++++.+.+
T Consensus 313 ~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 313 GGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CeEEEEeecCCCHHHHHHHHHHHhc
Confidence 3799999999999999999887753
No 446
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=40.89 E-value=1.1e+02 Score=35.01 Aligned_cols=24 Identities=33% Similarity=0.405 Sum_probs=19.2
Q ss_pred eeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 826 VEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 826 ~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
-+.||.|.|+ ||+.-||+=+.+-|
T Consensus 359 ~~liR~svGl----E~~~dli~dl~~al 382 (385)
T PRK08574 359 EDLVRLSVGL----EDVEDLIEDLDQAL 382 (385)
T ss_pred CCeEEEEecc----CCHHHHHHHHHHHH
Confidence 6799999998 88888887666644
No 447
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=40.64 E-value=75 Score=36.61 Aligned_cols=98 Identities=14% Similarity=0.155 Sum_probs=70.6
Q ss_pred CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HH-HHHHHCCcEEEeeccccC----CCCCccCCCCC
Q 002866 282 CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WM-ALAQQNHWHVLLDAGSLG----PKDMDSLGLSL 352 (872)
Q Consensus 282 d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I-~~Are~G~~VLVDAAQ~a----G~~mipLDLs~ 352 (872)
+.++|+.+|.. ++..-|.+--+.-+.|++.|-. .+ .+|.++++++++|-.|.+ |+ |.-.|-+.
T Consensus 195 d~eale~~l~~-------~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk-~la~d~en 266 (427)
T KOG1402|consen 195 DAEALEVALKS-------PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK-LLACDYEN 266 (427)
T ss_pred CHHHHHHHhcC-------CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc-EEEeehhh
Confidence 56888888853 4677888888889999999943 34 456899999999999864 44 45677788
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 353 FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
..||.+++ -|-|++.-.=+.+.+..++++..++|-
T Consensus 267 v~PDivil--gKalSGG~~Pvsavl~~~~im~~~~pg 301 (427)
T KOG1402|consen 267 VRPDIVIL--GKALSGGVYPVSAVLADDDIMLNIKPG 301 (427)
T ss_pred cCCCeEEE--eccccCCeeeeEEEEecHHHHhccCCC
Confidence 99999886 365443122266677777777666654
No 448
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=40.25 E-value=1e+02 Score=29.62 Aligned_cols=65 Identities=22% Similarity=0.250 Sum_probs=48.8
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 201 DIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 201 eARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
..=+.|++-+|++.- + -.-+|-.|+-+.+.+-.|| +||+... .++.+..++.+|+++|+.|...|
T Consensus 23 ~~v~~i~~~~gI~di--N-~IKPGIgEaTRvLLRRvP~----~vLVr~~-~~pd~~Hl~~LA~ekgVpVe~~~ 87 (100)
T PF15608_consen 23 AEVERIAERYGISDI--N-LIKPGIGEATRVLLRRVPW----KVLVRDP-DDPDLAHLLLLAEEKGVPVEVYP 87 (100)
T ss_pred HHHHHHHHHhCCCCc--c-cccCChhHHHHHHHhcCCC----EEEECCC-CCccHHHHHHHHHHcCCcEEEeC
Confidence 344577888998632 1 2259999999999999997 5665532 34678889999999999998765
No 449
>PRK05764 aspartate aminotransferase; Provisional
Probab=39.34 E-value=1.6e+02 Score=33.01 Aligned_cols=50 Identities=22% Similarity=0.256 Sum_probs=36.7
Q ss_pred hHHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHH
Q 002866 766 PEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKL 845 (872)
Q Consensus 766 p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl 845 (872)
..++++++++.||.++.|..... -+.||+|++. +.+|+.+.
T Consensus 341 ~~~~~~l~~~~gi~v~~g~~f~~-------------------------------------~~~vRis~~~--~~~~~~~~ 381 (393)
T PRK05764 341 LEFAEALLEEAGVAVVPGIAFGA-------------------------------------PGYVRLSYAT--SLEDLEEG 381 (393)
T ss_pred HHHHHHHHHhCCEEEccccccCC-------------------------------------CCEEEEEecC--CHHHHHHH
Confidence 45667788889999988743310 1278999874 79999999
Q ss_pred HHHHHHhcC
Q 002866 846 WAFVAKFLN 854 (872)
Q Consensus 846 ~~Fva~Fld 854 (872)
++-+.+++.
T Consensus 382 i~~l~~~~~ 390 (393)
T PRK05764 382 LERIERFLE 390 (393)
T ss_pred HHHHHHHHH
Confidence 888887654
No 450
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=37.77 E-value=1.5e+02 Score=34.77 Aligned_cols=119 Identities=21% Similarity=0.336 Sum_probs=73.0
Q ss_pred eechhhhhhhhc--chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEEE
Q 002866 690 ICRHLDHINMLG--LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAFN 755 (872)
Q Consensus 690 ~c~gLdh~d~lG--l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAFN 755 (872)
.-|||. .|+ |...+.-.+.+.+||.. || .+.+||=|.-. ..-|+.++|-
T Consensus 254 ~lRGlk---TL~~Rm~~~~~nA~~IA~~L~~------~p--------~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~ 316 (396)
T COG0626 254 LLRGLR---TLALRMERHNENALKIAEFLAD------HP--------KVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFE 316 (396)
T ss_pred HHhccc---hHHHHHHHHHHHHHHHHHHHhc------CC--------CeEEEECCCCCCCCcHHHHHHhcCCCceEEEEE
Confidence 345665 666 88888889999999984 65 35678877521 1389999999
Q ss_pred eccCCCCccChHHHHHHHHHcCC-eEee--c----ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeE
Q 002866 756 VRDKERGLINPEVVQKLAEKEGI-SLGI--G----FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEV 828 (872)
Q Consensus 756 v~d~~G~~v~p~~VqkLAdr~~I-sLr~--G----~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gv 828 (872)
+.+ . +.+.++.+.-.+ +++. | ..++|..+.+..... + .....| +.-+.
T Consensus 317 l~~------~-~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~-----~-----~r~~~G--------i~~~L 371 (396)
T COG0626 317 LKN------E-EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPL-----E-----ERAKAG--------ITDGL 371 (396)
T ss_pred eCC------h-HHHHHHHHhCCccEEeccCCCcccccccccccCcccCCH-----h-----HHHhcC--------CCCCe
Confidence 988 2 678888884332 2222 2 222222111110000 0 001112 23569
Q ss_pred EEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 829 VTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 829 VrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
||.|.|+ ||+.-||+=+.+-|+
T Consensus 372 vRlSVGl----Ed~eDLi~Dl~~Al~ 393 (396)
T COG0626 372 VRLSVGL----EDVEDLIADLEQALA 393 (396)
T ss_pred EEEEecC----CCHHHHHHHHHHHHH
Confidence 9999998 999999988777443
No 451
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=37.44 E-value=1.6e+02 Score=33.41 Aligned_cols=130 Identities=15% Similarity=0.166 Sum_probs=74.3
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCcccc-ceEEEEeccC-CCCccChHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERG-AAVAFNVRDK-ERGLINPEVV 769 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG-~~VAFNv~d~-~G~~v~p~~V 769 (872)
.+|..++.-+|+.+..|-+.+..++...|..+.. +.++.|.....+. .+.+|.+-.. .| ++...|
T Consensus 243 AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~r~~~ 309 (379)
T PRK11658 243 AAIALVQLAKLEALNARRREIAARYLQALADLPF-----------QPLSLPAWPHQHAWHLFIIRVDEERCG--ISRDAL 309 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----------ccCcCCCCCCceeEEEEEEEECCcccc--CCHHHH
Confidence 4677777778999999999999999999987642 2333343211122 3455555321 12 455555
Q ss_pred HHHHHHcCCeEeecccc-c--ccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHH
Q 002866 770 QKLAEKEGISLGIGFLS-H--IRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLW 846 (872)
Q Consensus 770 qkLAdr~~IsLr~G~l~-~--i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~ 846 (872)
.+....+||..+..+-. | +.+...+. . .+.+... .+--.+|..-+..--+.|||+++.
T Consensus 310 ~~~L~~~gI~~~~~~~~~~~~~~~~~~~~--~---------~~~p~~~--------~~~~~~l~lP~~~~l~~~~~~~i~ 370 (379)
T PRK11658 310 MEALKERGIGTGLHFRAAHTQKYYRERFP--T---------LSLPNTE--------WNSERICSLPLFPDMTDADVDRVI 370 (379)
T ss_pred HHHHHHCCCCCcccCcCcccChhhhccCC--C---------CCChHHH--------HHHhCeEEccCCCCCCHHHHHHHH
Confidence 55556789876654311 1 11111110 0 0011110 011236666677778899999999
Q ss_pred HHHHHhc
Q 002866 847 AFVAKFL 853 (872)
Q Consensus 847 ~Fva~Fl 853 (872)
+-|.+++
T Consensus 371 ~~i~~~~ 377 (379)
T PRK11658 371 TALQQIA 377 (379)
T ss_pred HHHHHHH
Confidence 9999864
No 452
>PLN02590 probable tyrosine decarboxylase
Probab=36.77 E-value=2.4e+02 Score=34.31 Aligned_cols=103 Identities=16% Similarity=0.108 Sum_probs=58.5
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCcc-ChHHHHHHHHHcCCe
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLI-NPEVVQKLAEKEGIS 779 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v-~p~~VqkLAdr~~Is 779 (872)
|+..+-.|.-.|++|+...|.+..+ ++|..|. .=++|.|-+........ ...+-++|.++-+
T Consensus 425 G~~~~i~~~~~lA~~~~~~l~~~~~-----------fel~~~~----~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~-- 487 (539)
T PLN02590 425 NLRNFIRDHVNLAKHFEDYVAQDPS-----------FEVVTTR----YFSLVCFRLAPVDGDEDQCNERNRELLAAVN-- 487 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC-----------eEEecCC----ceEEEEEEecCCCCCHHHHHHHHHHHHHHHH--
Confidence 3444445555678888888877654 7777763 35799999875321100 0122223332211
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEec-cccCCHHHHHHHHHHHHHh
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASL-GFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASL-G~lSnFEDVyrl~~Fva~F 852 (872)
..|... + - .....|+ .++|+++ .+.|+.+||+.+|+-|.++
T Consensus 488 -~~G~~~---v-------------s-----~t~~~g~----------~~lR~~i~n~~T~~~dv~~~~~~i~~~ 529 (539)
T PLN02590 488 -STGKIF---I-------------S-----HTALSGK----------FVLRFAVGAPLTEEKHVTEAWQIIQKH 529 (539)
T ss_pred -hCCCEE---E-------------E-----eeEECCE----------EEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 122111 0 0 0011222 3888776 7899999999999999885
No 453
>PRK06767 methionine gamma-lyase; Provisional
Probab=36.31 E-value=88 Score=35.69 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=19.8
Q ss_pred ceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 825 RVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 825 ~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
..+.||.|.|+ ||+.-||+=+.+-|
T Consensus 359 ~~~l~R~svGl----E~~~dl~~dl~~al 383 (386)
T PRK06767 359 YDNLIRLSVGL----ESWEDIVSDLEQAL 383 (386)
T ss_pred CCCeEEEEecc----CCHHHHHHHHHHHH
Confidence 36789999998 88888887776644
No 454
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=35.68 E-value=38 Score=39.70 Aligned_cols=132 Identities=12% Similarity=0.225 Sum_probs=68.0
Q ss_pred eeechhhhhhhhc--chhhHHHHHHHHHHHHH--HHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCcc
Q 002866 689 IICRHLDHINMLG--LNKTTCRLRFLINWLVT--SLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLI 764 (872)
Q Consensus 689 i~c~gLdh~d~lG--l~~I~~R~r~L~~wLv~--~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v 764 (872)
+.+|||. .|+ |...+.-...|.+||-. ......||.-...-...+.+=|-| .--|+.|+|.|.+
T Consensus 288 l~~rgl~---tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~---~g~gg~~sf~l~~------ 355 (436)
T PRK07812 288 LIAQGLE---TLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAP---KGTGAVLSFELAG------ 355 (436)
T ss_pred HHhcCcC---cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCc---CCCceEEEEEecC------
Confidence 5556666 555 77788888889999872 122233332111000000100000 1248999999964
Q ss_pred ChHHHHHHHHHcCCe-Eee--c----ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccC
Q 002866 765 NPEVVQKLAEKEGIS-LGI--G----FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLT 837 (872)
Q Consensus 765 ~p~~VqkLAdr~~Is-Lr~--G----~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lS 837 (872)
+...+.++.++-.+- +.+ | ..|+|....++.... + .....| +.-+.||.|.|+
T Consensus 356 ~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~-----~-----~~~~~g--------i~~~liRlSvGl-- 415 (436)
T PRK07812 356 GVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTP-----E-----EQLATG--------VTPGLVRLAVGI-- 415 (436)
T ss_pred CHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCH-----H-----HHHhcC--------CCCCeEEEEecc--
Confidence 234567777765542 222 3 223343222221100 0 000122 225689999998
Q ss_pred CHHHHHHHHHHHHHhcC
Q 002866 838 NFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 838 nFEDVyrl~~Fva~Fld 854 (872)
||++-||+=+.+-|+
T Consensus 416 --Ed~~dli~dl~~Al~ 430 (436)
T PRK07812 416 --EGIDDILADLEAGFA 430 (436)
T ss_pred --CCHHHHHHHHHHHHH
Confidence 888888887776544
No 455
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=35.60 E-value=98 Score=36.18 Aligned_cols=121 Identities=15% Similarity=0.264 Sum_probs=66.2
Q ss_pred eeechhhhhhhhc--chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC-----------c--cccceEE
Q 002866 689 IICRHLDHINMLG--LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK-----------Y--ERGAAVA 753 (872)
Q Consensus 689 i~c~gLdh~d~lG--l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~-----------~--~RG~~VA 753 (872)
+.+|||. .|. |...+.-...|.+||- .||. +.++|=|... . --|+.|+
T Consensus 284 l~~rgl~---tl~~R~~~~~~nA~~la~~L~------~~p~--------v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~s 346 (431)
T PRK08248 284 LLLQGLE---TLHLRMERHSENALAVAKFLE------EHEA--------VEWVSYPGLPSHPSYELAKKYLPKGQGAILT 346 (431)
T ss_pred HHhcCcC---cHHHHHHHHHHHHHHHHHHHH------hCCC--------cceEECCCCCCCccHHHHHHhCcCCCceEEE
Confidence 5667777 444 5667777778888876 3432 1233434211 1 1289999
Q ss_pred EEeccCCCCccChHHHHHHHHHcCC-eEe--ec----ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccce
Q 002866 754 FNVRDKERGLINPEVVQKLAEKEGI-SLG--IG----FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRV 826 (872)
Q Consensus 754 FNv~d~~G~~v~p~~VqkLAdr~~I-sLr--~G----~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~ 826 (872)
|.+.+ +...+.++.++-.+ .+. .| ..+||....+..... + .....| +.-
T Consensus 347 f~l~~------~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~-----~-----~~~~~g--------i~~ 402 (431)
T PRK08248 347 FGIKG------GVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSE-----E-----EQLAAG--------VTP 402 (431)
T ss_pred EEecC------CHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCH-----H-----HHHhcC--------CCC
Confidence 99964 24567778776554 222 23 223332111111000 0 000122 235
Q ss_pred eEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 827 EVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 827 gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.||.|.|+ ||+.-||+=+.+-|+
T Consensus 403 ~liRlsvGl----Ed~~dL~~Dl~~Al~ 426 (431)
T PRK08248 403 GLVRLSVGT----EAIDDILDDLRQAIR 426 (431)
T ss_pred CeEEEEecc----CCHHHHHHHHHHHHH
Confidence 689999998 888888887776543
No 456
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=34.33 E-value=1e+02 Score=36.21 Aligned_cols=121 Identities=15% Similarity=0.207 Sum_probs=66.8
Q ss_pred eeechhhhhhhhc--chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC----------c---cccceEE
Q 002866 689 IICRHLDHINMLG--LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK----------Y---ERGAAVA 753 (872)
Q Consensus 689 i~c~gLdh~d~lG--l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~----------~---~RG~~VA 753 (872)
+.+|||. .|. |...+.-...|.+||- .||. +.+||=|... . -=|+.|+
T Consensus 293 l~~rgl~---TL~lR~~~~~~nA~~lA~~L~------~hp~--------V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~s 355 (437)
T PRK05613 293 VTAQGLD---TLSLRLERHNENAIKVAEFLN------NHEK--------VAKVNFAGLKDSPWYATKEKLGLKYTGSVLS 355 (437)
T ss_pred HHHcccC---cHHHHHHHHHHHHHHHHHHHH------cCCC--------cceEECCCCCCCccHHHHHHhcCCCCceEEE
Confidence 4556766 455 6777777888899887 3431 1233433211 1 1388999
Q ss_pred EEeccCCCCccChHHHHHHHHHcCCe-Eee--c----ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccce
Q 002866 754 FNVRDKERGLINPEVVQKLAEKEGIS-LGI--G----FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRV 826 (872)
Q Consensus 754 FNv~d~~G~~v~p~~VqkLAdr~~Is-Lr~--G----~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~ 826 (872)
|.+.+ +...+.++.++-.+- +.+ | ..+||....+.... .......| +.-
T Consensus 356 f~l~~------~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~----------~~~~~~~G--------i~~ 411 (437)
T PRK05613 356 FDIKG------GKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSD----------EAGLARAG--------ITQ 411 (437)
T ss_pred EEecC------CHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCC----------HHHHHhcC--------CCC
Confidence 99853 256677888865542 222 2 22233211111000 00000122 235
Q ss_pred eEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 827 EVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 827 gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.||.|+|+ ||++-||+=+.+-|+
T Consensus 412 ~liRlsvGl----E~~~dLi~Dl~~Al~ 435 (437)
T PRK05613 412 ATVRLSVGI----EDIDDIIADLEGGFA 435 (437)
T ss_pred CeEEEEecc----CCHHHHHHHHHHHHh
Confidence 799999998 888888887776544
No 457
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=33.83 E-value=47 Score=38.24 Aligned_cols=123 Identities=19% Similarity=0.268 Sum_probs=65.3
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEEEe
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAFNV 756 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAFNv 756 (872)
+..++|+++. +-|..+..-.+.|..||- + ||. +-++|=|.-. ..-|+.|+|-+
T Consensus 251 l~l~~l~tL~-~R~~~~~~na~~la~~L~----~--~p~--------v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~ 315 (398)
T PRK08249 251 LILRGMKTLK-LRVRQQQESAMALAKYLQ----T--HPK--------VEAVYYPGLETHPNHEIAKAQMRGFGGILSFVL 315 (398)
T ss_pred HHHhCcchHH-HHHHHHHHHHHHHHHHHH----c--CCC--------eeEEECCCCCCCccHHHHHhhCCCCCceEEEEE
Confidence 3445666553 335555555666666664 2 431 2345544321 13499999999
Q ss_pred ccCCCCccChHHHHHHHHHcCC-eEeec------ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEE
Q 002866 757 RDKERGLINPEVVQKLAEKEGI-SLGIG------FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVV 829 (872)
Q Consensus 757 ~d~~G~~v~p~~VqkLAdr~~I-sLr~G------~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvV 829 (872)
.+ +...+.++.++-.+ .+++. ..+||.-..++.. . .+ .....| +.-+.|
T Consensus 316 ~~------~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~----~-~~-----~~~~~g--------i~~~li 371 (398)
T PRK08249 316 KG------GMDTVKRLLPKLRYAHRAANLGAVETIYGPARTTSHVEN----T-LE-----ERAALG--------IPEGLV 371 (398)
T ss_pred cC------CHHHHHHHHHhCCcceEccCCCCCCceeeCCcccccccC----C-HH-----HHHhcC--------CCCCeE
Confidence 64 25667788886664 23432 1222221111110 0 00 000112 235699
Q ss_pred EEeccccCCHHHHHHHHHHHHHhcC
Q 002866 830 TASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 830 rASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
|.|+|+ ||++-||+=+.+-|+
T Consensus 372 R~svGl----E~~~dl~~dl~~al~ 392 (398)
T PRK08249 372 RISVGI----EDTEDLIADLEQAFA 392 (398)
T ss_pred EEEecc----CCHHHHHHHHHHHHH
Confidence 999998 888888887776554
No 458
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=33.60 E-value=77 Score=36.03 Aligned_cols=129 Identities=18% Similarity=0.277 Sum_probs=63.6
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHH--HHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVT--SLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP 766 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~--~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p 766 (872)
+..+|++.+.. =|..+......|.+||-. .+.+..||.-....+..+++=| ...-|+.|+|.|.+ .
T Consensus 241 ~~l~~l~tl~~-r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~----~~g~g~~~s~~l~~-------~ 308 (380)
T TIGR01325 241 VLLKGLETLSL-RMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQ----QSGGGTVIGFDVAD-------R 308 (380)
T ss_pred HHHhccCcHHH-HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhh----CCCCceEEEEEECC-------H
Confidence 34456665554 366666666777777642 2222334432111111111100 01248999999962 5
Q ss_pred HHHHHHHHHcCC-eEeecc------cccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCH
Q 002866 767 EVVQKLAEKEGI-SLGIGF------LSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNF 839 (872)
Q Consensus 767 ~~VqkLAdr~~I-sLr~G~------l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnF 839 (872)
..+.++.++-.+ ++++.+ ..||....+... . .......| +.-+.||.|+|+
T Consensus 309 ~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~----~------~~~~~~~g--------i~~~liR~svGl---- 366 (380)
T TIGR01325 309 AAAWKVLDAVELVSITNNLGDAKSTITHPATTTHGRM----Q------PEERAAAG--------IGDGLVRLSVGL---- 366 (380)
T ss_pred HHHHHHHHcCCcceEcccCCCCCeeeeCCCccCcccC----C------HHHHHhcC--------CCCCeEEEEecc----
Confidence 667788886544 333321 122221111100 0 00000112 235799999998
Q ss_pred HHHHHHHHHHHH
Q 002866 840 EDVYKLWAFVAK 851 (872)
Q Consensus 840 EDVyrl~~Fva~ 851 (872)
||+.-||+=+.+
T Consensus 367 E~~~dl~~dl~~ 378 (380)
T TIGR01325 367 EDVDDLIADLKR 378 (380)
T ss_pred CCHHHHHHHHHh
Confidence 888888876554
No 459
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=33.18 E-value=65 Score=36.83 Aligned_cols=109 Identities=14% Similarity=0.206 Sum_probs=61.0
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEEEeccCCCCccChHHH
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAFNVRDKERGLINPEVV 769 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAFNv~d~~G~~v~p~~V 769 (872)
|..++...+.|.+||-. ||. +.++|=|.-. ..-|+.|+|-+.+ ...+
T Consensus 249 ~~~~~~~a~~la~~L~~------~p~--------v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~-------~~~~ 307 (380)
T PRK06176 249 MEAHQKNALCVAEFLEK------HPK--------VEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN-------DSEA 307 (380)
T ss_pred HHHHHHHHHHHHHHHHh------CCC--------eeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-------HHHH
Confidence 56667777788888763 321 2344544311 1248999999964 2567
Q ss_pred HHHHHHcCC-eEee--c----ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHH
Q 002866 770 QKLAEKEGI-SLGI--G----FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDV 842 (872)
Q Consensus 770 qkLAdr~~I-sLr~--G----~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDV 842 (872)
.++.++-.+ ++++ | ..++|....++.... + .....|. .-+.||.|+|+ ||+
T Consensus 308 ~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~-----~-----~~~~~gi--------~~~liR~svGl----E~~ 365 (380)
T PRK06176 308 VAFVESLKLFILGESLGGVESLVGIPAFMTHACIPK-----E-----QREAAGI--------RDGLVRLSVGI----EHE 365 (380)
T ss_pred HHHHHcCCcceEccCCCCCCceeeCCcccccccCCH-----H-----HHHhcCC--------CcCeEEEEecc----CCH
Confidence 788886665 3333 2 223332221111000 0 0001222 25699999998 888
Q ss_pred HHHHHHHHHhc
Q 002866 843 YKLWAFVAKFL 853 (872)
Q Consensus 843 yrl~~Fva~Fl 853 (872)
+-||+=+.+-|
T Consensus 366 ~dli~dl~~Al 376 (380)
T PRK06176 366 QDLLEDLEQAF 376 (380)
T ss_pred HHHHHHHHHHH
Confidence 88887776644
No 460
>PRK05967 cystathionine beta-lyase; Provisional
Probab=32.94 E-value=77 Score=36.80 Aligned_cols=84 Identities=10% Similarity=0.029 Sum_probs=47.2
Q ss_pred ceeechhhhhhhhcchhhHHHHHHHHHHHHHH--HhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccC
Q 002866 688 EIICRHLDHINMLGLNKTTCRLRFLINWLVTS--LLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLIN 765 (872)
Q Consensus 688 ~i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~--L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~ 765 (872)
.+.+|||..+. +=|...+.....|.+||-.. ..+..||.-.+.-+..+.+=+ ...=|+.|+|-+.+ |..++
T Consensus 250 ~l~~rgl~Tl~-lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~----~~g~gg~~sf~l~~--~~~~~ 322 (395)
T PRK05967 250 YQILRGLRTMG-IRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRD----FSGASGIFSFVLAA--GPEKG 322 (395)
T ss_pred HHHHcCcccHH-HHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHh----CCCCceEEEEEEcC--CCccc
Confidence 36778887332 23788888899999998842 233444431111011111000 01238999999963 21234
Q ss_pred hHHHHHHHHHcCC
Q 002866 766 PEVVQKLAEKEGI 778 (872)
Q Consensus 766 p~~VqkLAdr~~I 778 (872)
.+.+.++.++-.+
T Consensus 323 ~~~~~~f~~~l~l 335 (395)
T PRK05967 323 KAKAHAFLDALEI 335 (395)
T ss_pred HHHHHHHHHhCCc
Confidence 5778888886665
No 461
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=32.90 E-value=26 Score=40.46 Aligned_cols=116 Identities=16% Similarity=0.261 Sum_probs=64.8
Q ss_pred echhhhhhhhc--chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEEEe
Q 002866 691 CRHLDHINMLG--LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAFNV 756 (872)
Q Consensus 691 c~gLdh~d~lG--l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAFNv 756 (872)
-|||. .|. |...+.-.+.|+.||-+ ||. +-+||=|.-. ..-|+.|+|-+
T Consensus 247 ~rgl~---Tl~~R~~~~~~nA~~lA~~L~~------hp~--------V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l 309 (386)
T PF01053_consen 247 LRGLR---TLPLRMERQNENAEALAEFLEE------HPK--------VKRVYYPGLPSHPQHELAKRQMSGGGGLLSFEL 309 (386)
T ss_dssp HHHHT---THHHHHHHHHHHHHHHHHHHHT------STT--------EEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEE
T ss_pred hcCCC---cHHHHHHHHHHHHHHHHHHHHh------CCC--------CCeEEEcccccccceeeeeecccccCceeEEEe
Confidence 35555 555 77888888899999883 442 2346655321 34578999999
Q ss_pred ccCCCCccChHHHHHHHHHcCCe-Eeec------ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEE
Q 002866 757 RDKERGLINPEVVQKLAEKEGIS-LGIG------FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVV 829 (872)
Q Consensus 757 ~d~~G~~v~p~~VqkLAdr~~Is-Lr~G------~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvV 829 (872)
.+. ...+.++.++-++- +++. ..++|....+..... + .....|. .-+.|
T Consensus 310 ~~~------~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~-----e-----~~~~~Gi--------~~~li 365 (386)
T PF01053_consen 310 KGG------EEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSP-----E-----ERAEAGI--------SDGLI 365 (386)
T ss_dssp SSH------HHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCH-----H-----HHHHTTS---------TTEE
T ss_pred ccc------hhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCCh-----h-----hhhccCC--------CCCee
Confidence 982 26888999977753 4442 122333222211000 0 0001122 24699
Q ss_pred EEeccccCCHHHHHHHHHHHHH
Q 002866 830 TASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 830 rASLG~lSnFEDVyrl~~Fva~ 851 (872)
|.|+|+ ||++-||+=+.+
T Consensus 366 RlSvGl----Ed~~dLi~Dl~~ 383 (386)
T PF01053_consen 366 RLSVGL----EDPDDLIADLEQ 383 (386)
T ss_dssp EEE--S----S-HHHHHHHHHH
T ss_pred EEEecc----CCHHHHHHHHHH
Confidence 999996 888888876655
No 462
>PRK07503 methionine gamma-lyase; Provisional
Probab=32.80 E-value=67 Score=36.99 Aligned_cols=25 Identities=36% Similarity=0.445 Sum_probs=20.2
Q ss_pred eeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 826 VEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 826 ~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
-+.||.|.|+ ||++-||+=+.+-|+
T Consensus 371 ~~liR~svGl----E~~~dl~~dl~~Al~ 395 (403)
T PRK07503 371 EGLVRLSVGL----EDVADILADLAQALD 395 (403)
T ss_pred CCeEEEEEec----CCHHHHHHHHHHHHH
Confidence 5689999998 888888887776544
No 463
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=32.65 E-value=3.6e+02 Score=30.00 Aligned_cols=92 Identities=12% Similarity=0.055 Sum_probs=55.9
Q ss_pred hhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeec
Q 002866 704 KTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIG 783 (872)
Q Consensus 704 ~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G 783 (872)
.+..+.+.-.++++..|.++.. +.+|.| .|.-+-+.+.. + ...++++|+ ++||.++.|
T Consensus 264 ~~~~~~~~~r~~l~~~L~~~~~-----------~~~~~~-----~~~~~~~~~~~-~----~~~~~~~l~-~~gI~v~~~ 321 (356)
T PRK08056 264 ATWQWLAEEGARFYQALCALPL-----------LTVWPG-----RANYLFLRCER-P----DIDLQRALL-TQRILIRSC 321 (356)
T ss_pred HHHHHHHHHHHHHHHHHhcCCC-----------cEEcCC-----CCcEEEEEcCC-C----hHHHHHHHH-HCCeEEEEC
Confidence 3444555556677777766532 344532 35555555432 1 235556666 689999977
Q ss_pred ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 784 FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 784 ~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
.... + . ..+.||+|+| +-+|..+|.+.+.++++.
T Consensus 322 ~~f~-----------~----------------~--------~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 355 (356)
T PRK08056 322 ANYP-----------G----------------L--------DSRYYRVAIR---SAAENERLLAALRNVLTG 355 (356)
T ss_pred CCCC-----------C----------------C--------CCCEEEEEEc---CHHHHHHHHHHHHHHHcc
Confidence 3220 0 0 0237899987 679999999999987653
No 464
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=32.53 E-value=2.3e+02 Score=32.83 Aligned_cols=79 Identities=16% Similarity=0.230 Sum_probs=44.5
Q ss_pred ccceEEEEeccCCCCccChHHHHHHHHHcCC-eEeec------ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCC
Q 002866 748 RGAAVAFNVRDKERGLINPEVVQKLAEKEGI-SLGIG------FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGK 820 (872)
Q Consensus 748 RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~I-sLr~G------~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 820 (872)
-|+.|+|.|.+ +...+.++.++-.+ .+++. ..+|+....++.... + .....|
T Consensus 304 ~g~~~s~~~~~------~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~-----~-----~~~~~g----- 362 (405)
T PRK08776 304 FGAMLSFELEG------GEAAVRAFVDGLRYFTLAESLGGVESLIAHPASMTHAAMTA-----E-----ARAAAG----- 362 (405)
T ss_pred CceEEEEEEcC------CHHHHHHHHHhCCcceEccCCCCCceEEECCcccccccCCH-----H-----HHHhcC-----
Confidence 48999999964 25567788886665 33432 223332222211100 0 000112
Q ss_pred CCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 821 GGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 821 ~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.-+.||.|+|+ ||++-||+=+.+-|+
T Consensus 363 ---i~~~liR~svGl----E~~~dli~dl~~al~ 389 (405)
T PRK08776 363 ---ISDGLLRLSVGI----ESAEDLLIDLRAGLA 389 (405)
T ss_pred ---CCCCeEEEEeCc----CCHHHHHHHHHHHHH
Confidence 236799999998 788888877766444
No 465
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=32.17 E-value=3.4e+02 Score=30.69 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=19.8
Q ss_pred eEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 827 EVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 827 gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
+.||+|+| +-+|+.+|++.+.++
T Consensus 357 ~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 357 GYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred CEEEEecC---CHHHHHHHHHHHHHh
Confidence 37999998 778999999999874
No 466
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=32.09 E-value=4.2e+02 Score=30.60 Aligned_cols=104 Identities=14% Similarity=0.039 Sum_probs=65.2
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQK 771 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vqk 771 (872)
..|++++. ..+..|++.+.++|.+.|..+.. .|.|. . -.-+|.+++|.+.+.+.... ...+.+
T Consensus 318 a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~--------~~~i~---~--vrg~Gl~~~i~l~~~~~~~~-~~~l~~ 380 (423)
T PRK05964 318 ASLDLFED---EPVLERVAALSAGLAEGLEPFRD--------LPGVA---D--VRVLGAIGAVELDRPVLERD-GPALRA 380 (423)
T ss_pred HHHHHHHh---cCHHHHHHHHHHHHHHHHHhhcc--------CCCeE---E--eecccEEEEEEeccCcchhH-HHHHHH
Confidence 44565554 33567888888899888888732 12221 0 12467888888866331111 223333
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
.+-++||-++.. -.++|.+.-+..|.+||+++++.+.+
T Consensus 381 ~l~~~Gv~v~~~------------------------------------------~~~lR~~p~l~~t~edId~~v~~l~~ 418 (423)
T PRK05964 381 FALERGVLLRPL------------------------------------------GNTIYLMPPYIITAEELDRITDAIVE 418 (423)
T ss_pred HHHHCCeEEEec------------------------------------------CCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 334455544210 02799999999999999999999988
Q ss_pred hcC
Q 002866 852 FLN 854 (872)
Q Consensus 852 Fld 854 (872)
.++
T Consensus 419 al~ 421 (423)
T PRK05964 419 VAD 421 (423)
T ss_pred HHh
Confidence 764
No 467
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=32.02 E-value=2.8e+02 Score=30.72 Aligned_cols=96 Identities=10% Similarity=0.088 Sum_probs=62.5
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKL 772 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkL 772 (872)
.|++++. ..+..+++.+.+++.+.|.++-.. -+. . .. ...|..+.|.+.+ ++..+.+.
T Consensus 282 aL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~-----~~~--~-----~~-~~~g~~~~~~~~~------~~~~~~~~ 339 (379)
T TIGR00707 282 VLEVIEK---ERLLENVKEKGDYFKERLEELGKN-----YPN--K-----EV-RGKGLMLGIELEA------PCKDIVKK 339 (379)
T ss_pred HHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhh-----CCC--C-----cc-ccCceEEEEEecC------cHHHHHHH
Confidence 4455543 346678888888888888876331 011 1 11 1257778887643 13555555
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
+.++||.++.+. ...||+|+.+..|-|++.++++.+.+
T Consensus 340 l~~~Gv~v~~~~-----------------------------------------~~~lRi~~~~~~t~~~i~~~~~~l~~ 377 (379)
T TIGR00707 340 ALEKGLLVNCAG-----------------------------------------PKVLRFLPPLIITKEEIDEAVSALEE 377 (379)
T ss_pred HHHCCcEEeeCC-----------------------------------------CCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 667788876310 13799999999999999999998875
No 468
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=31.86 E-value=3e+02 Score=31.07 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=67.4
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHH
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEV 768 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~ 768 (872)
..+..|++++. ..+..+.+.+..+|.+.|.++.++ .+ +. ...+|.++.|-+.+... -...+
T Consensus 296 a~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~---------~~---~~--~~g~g~~~~i~~~~~~~--~~~~~ 356 (401)
T PRK00854 296 VARAALKVLTE---EGMIENAAEMGAYFLEGLRSIRSN---------IV---RE--VRGRGLMLAVELEPEAG--GARQY 356 (401)
T ss_pred HHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhccC---------ce---EE--EeccceEEEEEEecCch--hHHHH
Confidence 34456666554 335678888889999999988641 11 00 12467778776654221 12344
Q ss_pred HHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHH
Q 002866 769 VQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAF 848 (872)
Q Consensus 769 VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~F 848 (872)
+++|.+ +||.++.. +..+||.+.-+..+-|||+++++-
T Consensus 357 ~~~L~~-~GV~v~~~-----------------------------------------~~~~lR~~p~~~~t~e~i~~~i~~ 394 (401)
T PRK00854 357 CEALKE-RGLLAKDT-----------------------------------------HDHTIRLAPPLVITREQVDWALEQ 394 (401)
T ss_pred HHHHHH-CCeEEecC-----------------------------------------CCCEEEEeCCcccCHHHHHHHHHH
Confidence 455554 57765310 013899999999999999999999
Q ss_pred HHHhcC
Q 002866 849 VAKFLN 854 (872)
Q Consensus 849 va~Fld 854 (872)
+.+++.
T Consensus 395 l~~~l~ 400 (401)
T PRK00854 395 IAKVLA 400 (401)
T ss_pred HHHHhh
Confidence 988763
No 469
>PRK09028 cystathionine beta-lyase; Provisional
Probab=31.52 E-value=2.4e+02 Score=32.77 Aligned_cols=74 Identities=20% Similarity=0.360 Sum_probs=47.2
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEEEe
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAFNV 756 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAFNv 756 (872)
+..|||.++ .+=|...+.-...|.+||-. ||. +-+||=|.-. ..-|+.|+|.+
T Consensus 248 l~~rgl~TL-~lR~~~~~~na~~la~~L~~------~p~--------v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l 312 (394)
T PRK09028 248 LAMRGLRTL-GVRLAQHEKNALKVANWLAT------RPE--------VDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVL 312 (394)
T ss_pred HHHcccCcH-HHHHHHHHHHHHHHHHHHhc------CCC--------ccEEECCCCCCCccHHHHHHhccCCCceEEEEE
Confidence 567788742 12388888899999999873 442 2244434211 12389999999
Q ss_pred ccCCCCccChHHHHHHHHHcC-CeEee
Q 002866 757 RDKERGLINPEVVQKLAEKEG-ISLGI 782 (872)
Q Consensus 757 ~d~~G~~v~p~~VqkLAdr~~-IsLr~ 782 (872)
.+ | +...+.++.++-. |.+++
T Consensus 313 ~~--~---~~~~~~~f~~~l~l~~~~~ 334 (394)
T PRK09028 313 KQ--G---DPKAVTALVEGMQHFKMGF 334 (394)
T ss_pred CC--C---CHHHHHHHHHhCCcceEec
Confidence 64 2 3677888888666 44443
No 470
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=30.55 E-value=1.9e+02 Score=34.17 Aligned_cols=124 Identities=15% Similarity=0.228 Sum_probs=68.3
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC-----------c--cccceEEEE
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK-----------Y--ERGAAVAFN 755 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~-----------~--~RG~~VAFN 755 (872)
+.+|||.+++ +=|...+.....|.+||-. ||. +-.||=|... . --|++|+|.
T Consensus 281 l~~rgL~Tl~-lR~~r~~~Na~~la~~L~~------~p~--------V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~ 345 (432)
T PRK06702 281 ISNIGLETLH-LRMERHSENALAVAKWLAD------HER--------IEWVNYPGLDSNENYSLAQKYLKKGASGVLTFG 345 (432)
T ss_pred HHHhccCcHH-HHHHHHHHHHHHHHHHHHh------CCC--------cceEECCCCCCCccHHHHHHhCcCCCceEEEEE
Confidence 6677888665 3477778888888888872 431 1223434211 1 137999999
Q ss_pred eccCCCCccChHHHHHHHHHcCC-eEee--c-c---cccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeE
Q 002866 756 VRDKERGLINPEVVQKLAEKEGI-SLGI--G-F---LSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEV 828 (872)
Q Consensus 756 v~d~~G~~v~p~~VqkLAdr~~I-sLr~--G-~---l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gv 828 (872)
+.+ +...+.++.++-.+ .+.+ | . .+||.-..+.. .+.. ..+...++-+.
T Consensus 346 l~~------~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~--------------~~~~----~~~~~Gi~~~l 401 (432)
T PRK06702 346 IKG------GLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQ--------------LSAE----DQRLAGVTSDL 401 (432)
T ss_pred ecC------CHHHHHHHHHhCccceeccccCCCCcceECCCCCCccc--------------CCHH----HHHhcCCCCCe
Confidence 973 24556677775443 2222 2 1 11221101110 0000 00112233679
Q ss_pred EEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 829 VTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 829 VrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
||.|+|+ ||++-||+=+.+-|+.
T Consensus 402 iRlSvGl----Ed~eDLi~Dl~~Al~~ 424 (432)
T PRK06702 402 IRLSVGI----EDVSDIIADLEAALVG 424 (432)
T ss_pred EEEEecc----CCHHHHHHHHHHHHhc
Confidence 9999998 8898898887776554
No 471
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=30.55 E-value=4.2e+02 Score=29.25 Aligned_cols=24 Identities=21% Similarity=0.177 Sum_probs=20.6
Q ss_pred EEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 828 VVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 828 vVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.||+|+| +-++..+|++.+.++++
T Consensus 309 ~iRis~~---~~~~~~~l~~al~~~~~ 332 (332)
T PRK06425 309 YIRIAIR---RRSFNIKLVNALRNFLN 332 (332)
T ss_pred EEEEEeC---CHHHHHHHHHHHHHHhC
Confidence 7899988 46899999999998875
No 472
>PRK09105 putative aminotransferase; Provisional
Probab=30.43 E-value=2.6e+02 Score=31.59 Aligned_cols=86 Identities=14% Similarity=0.152 Sum_probs=52.8
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccC-hHHHHHHHHHcCCeEe
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLIN-PEVVQKLAEKEGISLG 781 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~-p~~VqkLAdr~~IsLr 781 (872)
.....+.+...++|+..|.++. ++++.| .|..+.+.+- .+ ..++++|++ +||.++
T Consensus 282 ~~~~~~~~~~r~~l~~~L~~~g------------~~~~~~-----~~~f~~~~~~------~~~~~l~~~L~~-~gI~v~ 337 (370)
T PRK09105 282 PQRRAENAAVREDTIAWLKKKG------------YKCTPS-----QANCFMVDVK------RPAKAVADAMAK-QGVFIG 337 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC------------CCcCCC-----CCcEEEEeCC------CCHHHHHHHHHH-CCcEEe
Confidence 3445566777788888887743 234433 3444444331 12 356666765 599985
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.+| .. . -+.||+|+| +-+++.+|++.+..++
T Consensus 338 ~~~--~~-----~-------------------------------~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 338 RSW--PI-----W-------------------------------PNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred cCC--CC-----C-------------------------------CCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 432 00 0 137899988 5789999999998754
No 473
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=29.99 E-value=74 Score=36.58 Aligned_cols=25 Identities=28% Similarity=0.234 Sum_probs=19.4
Q ss_pred eeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 826 VEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 826 ~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
-+.||.|+|+ ||++-||+=+.+-|+
T Consensus 370 ~~liR~svGl----E~~~dl~~dl~~al~ 394 (398)
T PRK07504 370 EGFLRLSAGL----EDTDDLIEDLAAALK 394 (398)
T ss_pred CCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 5699999998 888888776666443
No 474
>PRK06234 methionine gamma-lyase; Provisional
Probab=28.67 E-value=70 Score=36.73 Aligned_cols=25 Identities=32% Similarity=0.372 Sum_probs=20.1
Q ss_pred eeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 826 VEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 826 ~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
-+.||.|.|+ ||+.-||+=+.+-|+
T Consensus 372 ~~l~R~svGl----E~~~dl~~dl~~al~ 396 (400)
T PRK06234 372 DGLVRLSVGL----EDVDDIIADLKQALD 396 (400)
T ss_pred CCeEEEEeCC----CCHHHHHHHHHHHHH
Confidence 6799999998 888888877776554
No 475
>PRK08363 alanine aminotransferase; Validated
Probab=28.49 E-value=3.7e+02 Score=30.40 Aligned_cols=63 Identities=14% Similarity=0.149 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEE-EeccCCCCccChHHHHHHHHHcCCeEeec
Q 002866 705 TTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAF-NVRDKERGLINPEVVQKLAEKEGISLGIG 783 (872)
Q Consensus 705 I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAF-Nv~d~~G~~v~p~~VqkLAdr~~IsLr~G 783 (872)
+..+++...++|.+.|..+.+ +++|.| .|+.+.| .+-+ ....-+..++++++.++||.++-|
T Consensus 297 ~~~~~~~~~~~l~~~L~~~~~-----------~~~~~p-----~g~~~~~~~l~~-~~~~~~~~~~~~~l~~~gV~v~~g 359 (398)
T PRK08363 297 YMKKLKERRDYIYKRLNEIPG-----------ISTTKP-----QGAFYIFPRIEE-GPWKDDKEFVLDVLHEAHVLFVHG 359 (398)
T ss_pred HHHHHHHHHHHHHHHHhcCCC-----------CEecCC-----CeEEEEEEEecc-CCCCCHHHHHHHHHHhCCEEEeCc
Confidence 345566666777777766432 455554 4555555 3322 111124667889889999999877
Q ss_pred c
Q 002866 784 F 784 (872)
Q Consensus 784 ~ 784 (872)
.
T Consensus 360 ~ 360 (398)
T PRK08363 360 S 360 (398)
T ss_pred h
Confidence 4
No 476
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=27.21 E-value=1.4e+02 Score=34.87 Aligned_cols=77 Identities=19% Similarity=0.374 Sum_probs=47.6
Q ss_pred CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeeccccCCCCC------ccCCC
Q 002866 282 CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSLGPKDM------DSLGL 350 (872)
Q Consensus 282 d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~aG~~m------ipLDL 350 (872)
|+++++++|..++++. .+-..+++=|-|| +-|--+- .+-+ ..+++||+.++||-+|.+|... ...+|
T Consensus 254 Cl~~Ve~li~~~~~k~-~pVaaiIvEPIQs-EGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l 331 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKK-KPVAAIIVEPIQS-EGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNL 331 (484)
T ss_pred HHHHHHHHHHHHhhcC-CCeEEEEeechhc-cCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCC
Confidence 5677888888775432 2334566666554 3343221 2333 4568999999999999765310 13455
Q ss_pred CCCCCcEEEEc
Q 002866 351 SLFRPDFIITS 361 (872)
Q Consensus 351 s~l~~DFlv~S 361 (872)
+ .+||.++||
T Consensus 332 ~-~PpD~vTFS 341 (484)
T KOG1405|consen 332 D-SPPDVVTFS 341 (484)
T ss_pred C-CCccceehh
Confidence 4 478998886
No 477
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=26.86 E-value=4.8e+02 Score=28.86 Aligned_cols=23 Identities=22% Similarity=0.262 Sum_probs=20.1
Q ss_pred EEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 828 VVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 828 vVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.+|+|+| +.+|+.+|++.+.+++
T Consensus 337 ~iRi~~~---~~~~~~~l~~al~~~~ 359 (359)
T PRK03158 337 GVRITIG---LKEQNDKIIELLKELL 359 (359)
T ss_pred eEEEecC---CHHHHHHHHHHHHHhC
Confidence 7899977 8999999999998863
No 478
>PRK08361 aspartate aminotransferase; Provisional
Probab=25.23 E-value=4.5e+02 Score=29.67 Aligned_cols=65 Identities=17% Similarity=0.271 Sum_probs=39.1
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEE-EeccCCCCccC-hHHHHHHHHHcCCe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAF-NVRDKERGLIN-PEVVQKLAEKEGIS 779 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAF-Nv~d~~G~~v~-p~~VqkLAdr~~Is 779 (872)
+..+..+.+...+++++.|.++.. +.++.|. |+...| .+.+ ..++ ..++++|++++||.
T Consensus 291 ~~~~~~~~~~~~~~~~~~L~~~~~-----------~~~~~p~-----g~~~~~~~l~~---~~~~~~~l~~~l~~~~gv~ 351 (391)
T PRK08361 291 VEEMRKEYNERRKLVLKRLKEMPH-----------IKVFEPK-----GAFYVFANIDE---TGMSSEDFAEWLLEKARVV 351 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC-----------CeecCCC-----EEEEEEEECCC---CCCCHHHHHHHHHHhCCEE
Confidence 345667777777888888877532 5667663 333222 3321 1123 44556677789999
Q ss_pred Eeeccc
Q 002866 780 LGIGFL 785 (872)
Q Consensus 780 Lr~G~l 785 (872)
++.|..
T Consensus 352 v~pg~~ 357 (391)
T PRK08361 352 VIPGTA 357 (391)
T ss_pred EcCchh
Confidence 988744
No 479
>PRK08114 cystathionine beta-lyase; Provisional
Probab=24.43 E-value=3.5e+02 Score=31.58 Aligned_cols=124 Identities=19% Similarity=0.277 Sum_probs=69.3
Q ss_pred eeechhhhhhhhc--chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEE
Q 002866 689 IICRHLDHINMLG--LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAF 754 (872)
Q Consensus 689 i~c~gLdh~d~lG--l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAF 754 (872)
+.+|||. .|. |...+.-...|.+||- .||. +-+||=|.-. ..-|+.|+|
T Consensus 251 l~~rgl~---TL~lR~~~~~~na~~va~~L~------~hp~--------V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf 313 (395)
T PRK08114 251 MTSRGLR---TLGVRLRQHEESSLKVAEWLA------EHPE--------VARVNHPALPGCKGHEFWKRDFTGSSGLFSF 313 (395)
T ss_pred HHHcCCC---cHHHHHHHHHHHHHHHHHHHH------cCCC--------EeEEECCCCCCCccHHHHHhhCCCCceEEEE
Confidence 5667777 444 7788888899999987 3432 2345544311 234899999
Q ss_pred EeccCCCCccChHHHHHHHHHcCC-eEee--ccc-ccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEE
Q 002866 755 NVRDKERGLINPEVVQKLAEKEGI-SLGI--GFL-SHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVT 830 (872)
Q Consensus 755 Nv~d~~G~~v~p~~VqkLAdr~~I-sLr~--G~l-~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVr 830 (872)
.+.+. ++...+.++.+.-.+ .+.+ |.. +.+.. ..+.. ... ...+...|.. -+.||
T Consensus 314 ~l~~~----~~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~-~~~~~-~~~-------~~~~~~~~~~--------~~liR 372 (395)
T PRK08114 314 VLKKK----LTDEQLANYLDNFSLFSMAYSWGGFESLILA-NQPEE-IAA-------IRPAGEVDFT--------GTLIR 372 (395)
T ss_pred EecCc----ccHHHHHHHHHhCCcceeecccCCccceecc-CCchh-hhc-------cCChhHhcCC--------CCeEE
Confidence 98641 246778888886554 2222 311 11110 00100 000 0000011111 27999
Q ss_pred EeccccCCHHHHHHHHHHHHHhcC
Q 002866 831 ASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 831 ASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.|+|+ ||++-||+=+.+-|+
T Consensus 373 lSvGl----Ed~~DLi~Dl~~Al~ 392 (395)
T PRK08114 373 LHIGL----EDVDDLIADLAAGFA 392 (395)
T ss_pred EEecc----CCHHHHHHHHHHHHH
Confidence 99996 899999887776443
No 480
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=24.20 E-value=1.2e+03 Score=27.83 Aligned_cols=176 Identities=15% Similarity=0.095 Sum_probs=91.8
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhh-CCCC---C-C--CeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 201 DIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAES-YPFH---T-N--KKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 201 eARerIA~lLgA~~dEY~VVFTsnATeALnLVaes-lpf~---~-G--d~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
++-+.|.+.++-..-+ .|-|..++|+|+..++.- +.+. . - ..+|..-.--|.--+.....+ +..-.-.|
T Consensus 102 ~l~~~l~~~~~~~~~~-rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~---~~s~y~~~ 177 (433)
T KOG1401|consen 102 ELEEVLSAVLGKGSAE-RVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVT---GNSKYGLP 177 (433)
T ss_pred HHHHHHHhcccCCCcc-EEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhh---cccccCCC
Confidence 3445566666432222 589999999997765442 2211 1 1 136643221133223222211 21111222
Q ss_pred ccC--CC----CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH--HH---H-HHHHHCCcEEEeeccccC
Q 002866 274 FKW--PT----LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY--QW---M-ALAQQNHWHVLLDAGSLG 341 (872)
Q Consensus 274 vd~--p~----g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL--e~---I-~~Are~G~~VLVDAAQ~a 341 (872)
++. |+ .--+++++++.+...+ + ...-|.+-.+.-.-| ++|+ +- + .+|+++|+.++.|=+|.+
T Consensus 178 ~~p~~p~v~~~~ynd~t~l~k~~~~h~----~-~IaAVIvEPiqGaGG-~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG 251 (433)
T KOG1401|consen 178 FDPIAPDVVTAEYNDSTALEKLFESHK----G-EIAAVIVEPIQGAGG-IIPADPEFLIGLRKECDDNGVLLIFDEVQTG 251 (433)
T ss_pred CCCCCCceeecccCCHHHHHHHHHhCC----C-ceEEEEEecccCCCC-cccCCHHHHHHHHHHHhhcCceEEeehhhhC
Confidence 210 00 0015788888887531 1 233333433334445 4554 21 2 467899999999999875
Q ss_pred -CCCCccCCCC---CCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccCCC
Q 002866 342 -PKDMDSLGLS---LFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQS 390 (872)
Q Consensus 342 -G~~mipLDLs---~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~~ 390 (872)
+.. -.+-.. ...||.+++ -|.+|+ =-=+|+..++..+++.+.|..
T Consensus 252 ~gR~-g~~~a~e~~~~~PDI~t~--aK~L~g-GlPigA~~v~~kV~~~i~~~~ 300 (433)
T KOG1401|consen 252 LGRL-GYGWAQEYFGVTPDITTV--AKPLGG-GLPIGATGVRDKVAEMISPGD 300 (433)
T ss_pred cccc-chHHHHHHhCcCCcceee--hhhccC-CceeEEEeehHHHHhhcCCCC
Confidence 320 111001 145887665 576664 123899999999998887653
No 481
>COG1740 HyaA Ni,Fe-hydrogenase I small subunit [Energy production and conversion]
Probab=24.04 E-value=2.1e+02 Score=33.04 Aligned_cols=103 Identities=16% Similarity=0.122 Sum_probs=62.5
Q ss_pred HHHHHHHHHhhhhcccccCCCCCcc-hHHHHHHHHhhCCCCCCchhHHHHHhhcccCCCCceecccCCCCCCcHHHHHHh
Q 002866 91 AQREFLRATALAAERVFETEESIPD-LSEAFSKFLTMYPKYQSSDKIDQLRANEYLHLSPKVCLDYCGFGLFSYIQTLHY 169 (872)
Q Consensus 91 ~rr~f~~~~~~~~~~~f~~h~~lP~-l~~a~~~FL~~~p~y~~t~~ID~lR~~EFP~L~~~IYLDyAAtgp~p~~VieA~ 169 (872)
+||+|++..++.+.+.| |++ +. .+-+|+-|.+-....++|.-+..+-.+.+-+.+
T Consensus 14 ~Rr~f~k~~~~~~a~l~-----L~~~~~------------------~~~~~a~e~~~~~~viWLhg~eCTGcteSfLrs- 69 (355)
T COG1740 14 TRRDFLKLCGALAASLG-----LSASYA------------------PEIAKALENKPRTPVIWLHGLECTGCTESFLRS- 69 (355)
T ss_pred cHHHHHHHHHHHHHHhc-----cCccch------------------HHHHHHHhcCCCCceEEEecccccCchHHHhcc-
Confidence 79999999888777777 443 32 222233233333357888888887777554321
Q ss_pred hhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEe
Q 002866 170 WESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTM 247 (872)
Q Consensus 170 ~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~ 247 (872)
.+|. +-+.|.+|++....| .+-+++.+.|-.++.+.+.=.+|+.||+.
T Consensus 70 ---------------------~~P~-------~~~li~~~IsL~Yhe--tlmaa~G~~aee~l~~~i~~~kg~yILvV 117 (355)
T COG1740 70 ---------------------EHPT-------ANDLILELISLEYHE--TLMAASGTQAEELLEDAILKYKGKYILVV 117 (355)
T ss_pred ---------------------CCCC-------HHHHHHHHHhhhhhh--hhhhhcchhHHHHHHHHHHhcCCceEEEE
Confidence 3453 445677777776554 66677777777766666543345555544
No 482
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=23.10 E-value=3.6e+02 Score=30.34 Aligned_cols=108 Identities=12% Similarity=0.078 Sum_probs=63.7
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHH
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEV 768 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~ 768 (872)
+.+..|+.+..-+ +..|++.+..++.+.|.++..- .+.+.-. ...|.++++-+-+.++ .-...+
T Consensus 287 aa~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~l~~~-------~~~~~~~-----~~~g~~~~v~~~~~~~-~~~~~~ 350 (400)
T PTZ00125 287 VAVEALEVLKEEK---LAENAQRLGEVFRDGLKELLKK-------SPWVKEI-----RGKGLLNAIVFDHSDG-VNAWDL 350 (400)
T ss_pred HHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhc-------CCCeEEE-----ecccEEEEEEEccCcc-hHHHHH
Confidence 3345566665434 3456666777777777776210 0111111 1357777776543222 122344
Q ss_pred HHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHH
Q 002866 769 VQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAF 848 (872)
Q Consensus 769 VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~F 848 (872)
+++|. ++||.+..+. -.+||++..+..+-+||+++++-
T Consensus 351 ~~~l~-~~Gv~v~~~~-----------------------------------------~~~lRi~~~~~~~~~~i~~~l~~ 388 (400)
T PTZ00125 351 CLKLK-ENGLLAKPTH-----------------------------------------DNIIRFAPPLVITKEQLDQALEI 388 (400)
T ss_pred HHHHH-HCCeEEeecC-----------------------------------------CCEEEEECCccCCHHHHHHHHHH
Confidence 55555 5677764210 12899999988999999999999
Q ss_pred HHHhcC
Q 002866 849 VAKFLN 854 (872)
Q Consensus 849 va~Fld 854 (872)
+.+++.
T Consensus 389 l~~~l~ 394 (400)
T PTZ00125 389 IKKVLK 394 (400)
T ss_pred HHHHHH
Confidence 988664
No 483
>PRK05957 aspartate aminotransferase; Provisional
Probab=22.68 E-value=4e+02 Score=30.13 Aligned_cols=21 Identities=19% Similarity=0.134 Sum_probs=16.5
Q ss_pred hHHHHHHHHHcCCeEeecccc
Q 002866 766 PEVVQKLAEKEGISLGIGFLS 786 (872)
Q Consensus 766 p~~VqkLAdr~~IsLr~G~l~ 786 (872)
..++++++.+.||.++.|...
T Consensus 332 ~~~~~~l~~~~gv~v~pg~~f 352 (389)
T PRK05957 332 FELVKQLIREYRVAVIPGTTF 352 (389)
T ss_pred HHHHHHHHHHCCEEEccchhh
Confidence 467788888899999988644
No 484
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=22.43 E-value=8.1e+02 Score=24.69 Aligned_cols=109 Identities=14% Similarity=0.062 Sum_probs=59.9
Q ss_pred cEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCH-------HHHHHHH
Q 002866 218 GLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCS-------TDLRKQI 290 (872)
Q Consensus 218 ~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~-------edLe~~I 290 (872)
++||-.++|..+.++- .++-+++=.|+|. ++.-...+.+..+++|..+ +|.+.. ..-.+.|
T Consensus 21 ~~Ifld~GtT~~~la~-~L~~~~~ltVvTn------sl~ia~~l~~~~~~~vi~~-----GG~~~~~~~~~~G~~a~~~l 88 (161)
T PF00455_consen 21 DTIFLDSGTTTLELAK-YLPDKKNLTVVTN------SLPIANELSENPNIEVILL-----GGEVNPKSLSFVGPIALEAL 88 (161)
T ss_pred CEEEEECchHHHHHHH-HhhcCCceEEEEC------CHHHHHHHHhcCceEEEEe-----CCEEEcCCCcEECchHHHHH
Confidence 4777777777665543 3432222234443 3433334444446777654 232222 1112333
Q ss_pred hhhhccCCCCCceEEEEeCccCcccchhcHH---HHHHH---HHCCcEEEeeccccCCC
Q 002866 291 SSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ---WMALA---QQNHWHVLLDAGSLGPK 343 (872)
Q Consensus 291 ~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe---~I~~A---re~G~~VLVDAAQ~aG~ 343 (872)
..+ .....++.+.+++...|.-.+-. .+..+ +.....+++|.+.+.-.
T Consensus 89 ~~~-----~~d~afi~~~gi~~~~G~~~~~~~~a~vk~~~~~~s~~~ill~D~sKf~~~ 142 (161)
T PF00455_consen 89 RQF-----RFDKAFIGADGISEEGGLTTSDEEEAEVKRAMIENSKQVILLADSSKFGRN 142 (161)
T ss_pred Hhh-----ccceEEecccEecCCCccccchHHHHHHHHHHHHhcCeEEEEeChhhcCCe
Confidence 332 24578888888888788877653 23322 45678899999976654
No 485
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=22.38 E-value=5.8e+02 Score=28.53 Aligned_cols=92 Identities=13% Similarity=0.104 Sum_probs=56.9
Q ss_pred hhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeec
Q 002866 704 KTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIG 783 (872)
Q Consensus 704 ~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G 783 (872)
....|++.+.+++.+.|.++.... +.+.-. ..+|..+.+.+ +++ ...+++++. ++||.++.+
T Consensus 302 ~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~-----~~~g~~~~i~~-~~~----~~~~~~~l~-~~Gv~v~~~ 363 (396)
T PRK02627 302 GLLENAAEVGEYLRAKLRELLEKY-------PGIKEV-----RGLGLMIGIEL-DRP----AAEIVKKAL-EKGLLINVT 363 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhC-------CCeeee-----ccCcEEEEEEe-cCc----HHHHHHHHH-HCCeEEeec
Confidence 345677777777777777764211 112111 12577777776 321 233444444 458877542
Q ss_pred ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 784 FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 784 ~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
. ..+||.++.+..+.+|++++++-+.+++.
T Consensus 364 ~-----------------------------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~l~ 393 (396)
T PRK02627 364 G-----------------------------------------DNVLRLLPPLIISKEEIDEAVDRLEEVLK 393 (396)
T ss_pred C-----------------------------------------CCEEEEECCcccCHHHHHHHHHHHHHHHH
Confidence 1 12689999988999999999998888663
No 486
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=22.17 E-value=5.4e+02 Score=29.62 Aligned_cols=101 Identities=14% Similarity=0.083 Sum_probs=66.1
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQK 771 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vqk 771 (872)
..|+.++. ..+-.|++.+.++|...|.+|..+. +..-| .-+|.++++-+.+. ....+.+
T Consensus 289 a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~-----~i~~v--------rG~Glm~~i~l~~~-----~~~~~~~ 347 (395)
T PRK03715 289 AVISQLLA---PGFLEGVRARGEYLKEKLLELSEER-----GLEGE--------RGEGLLRALLLGKD-----IGPQIVE 347 (395)
T ss_pred HHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcC-----CcCeE--------EcceeEEEEEecCc-----hHHHHHH
Confidence 34555543 4567889999999999999885421 11112 24689999988652 1134445
Q ss_pred HHHHc---CCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHH
Q 002866 772 LAEKE---GISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAF 848 (872)
Q Consensus 772 LAdr~---~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~F 848 (872)
.|.+. ||-++. + . ..++|.+..+..|-|||+++++-
T Consensus 348 ~~~~~~~~Gi~~~~-----~---------------------------~---------~~~lR~~p~l~~t~~ei~~~~~~ 386 (395)
T PRK03715 348 KARDMQPDGLLLNA-----P---------------------------R---------PNLLRFMPALNVTTEEIDQMIAM 386 (395)
T ss_pred HHHhccCCCEEEee-----c---------------------------C---------CCEEEEeCCcccCHHHHHHHHHH
Confidence 55544 433210 0 0 12899999999999999999999
Q ss_pred HHHhcC
Q 002866 849 VAKFLN 854 (872)
Q Consensus 849 va~Fld 854 (872)
+.+.++
T Consensus 387 l~~~l~ 392 (395)
T PRK03715 387 LRSVLD 392 (395)
T ss_pred HHHHHH
Confidence 987653
No 487
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=22.12 E-value=7.2e+02 Score=28.48 Aligned_cols=115 Identities=14% Similarity=0.096 Sum_probs=68.7
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCc-cC----hHHHHHHHHHcC
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGL-IN----PEVVQKLAEKEG 777 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~-v~----p~~VqkLAdr~~ 777 (872)
...-.+++.+.++|...|.+..||.-.+-.| ...|++ ...|+++.+-+-|..-.. .. ...+.+.+-++|
T Consensus 261 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg--~~~~~~----~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G 334 (392)
T PLN03227 261 PQLLNRLHDSIANLYSTLTNSSHPYALKLRN--RLVITS----DPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEG 334 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccc--ccccCC----CCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCC
Confidence 3456678888889998988766653211111 111222 357999999985521100 01 124455555678
Q ss_pred CeEee-cccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 778 ISLGI-GFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 778 IsLr~-G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
|-++. |. ++.+ .+ ..++...+|+++-.--|.|||+++++-+.+.+.
T Consensus 335 i~~~~~~~--~~~~--~~---------------------------~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~ 381 (392)
T PLN03227 335 VAVVSTGG--HVKK--FL---------------------------QLVPPPCLRVVANASHTREDIDKLLTVLGEAVE 381 (392)
T ss_pred CEEEeccc--ccCC--cC---------------------------CCCCCceEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 87753 21 1100 00 011246899999999999999999999888553
No 488
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=22.03 E-value=6.3e+02 Score=23.27 Aligned_cols=91 Identities=9% Similarity=0.085 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHC--
Q 002866 253 QSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQN-- 329 (872)
Q Consensus 253 nSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~-- 329 (872)
-.+..+...+++.|.+|..+..+ ++.+++.+.+.+. +..+|+++.. .+....... .++.+|+.
T Consensus 15 lGl~~la~~l~~~G~~v~~~d~~-----~~~~~l~~~~~~~-------~pd~V~iS~~--~~~~~~~~~~l~~~~k~~~p 80 (121)
T PF02310_consen 15 LGLLYLAAYLRKAGHEVDILDAN-----VPPEELVEALRAE-------RPDVVGISVS--MTPNLPEAKRLARAIKERNP 80 (121)
T ss_dssp HHHHHHHHHHHHTTBEEEEEESS-----B-HHHHHHHHHHT-------TCSEEEEEES--SSTHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHCCCeEEEECCC-----CCHHHHHHHHhcC-------CCcEEEEEcc--CcCcHHHHHHHHHHHHhcCC
Confidence 34455667788889999988653 4568888877653 3567777542 233444443 55666665
Q ss_pred CcEEEeeccccCCCCCccCC-CCC-CCCcEEEE
Q 002866 330 HWHVLLDAGSLGPKDMDSLG-LSL-FRPDFIIT 360 (872)
Q Consensus 330 G~~VLVDAAQ~aG~~mipLD-Ls~-l~~DFlv~ 360 (872)
++.+++=+.+.-.. +=. +.. .++|+++.
T Consensus 81 ~~~iv~GG~~~t~~---~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 81 NIPIVVGGPHATAD---PEEILREYPGIDYVVR 110 (121)
T ss_dssp TSEEEEEESSSGHH---HHHHHHHHHTSEEEEE
T ss_pred CCEEEEECCchhcC---hHHHhccCcCcceecC
Confidence 78888877653211 111 112 46787765
No 489
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=21.94 E-value=4.8e+02 Score=24.40 Aligned_cols=90 Identities=11% Similarity=0.044 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHC---Cc
Q 002866 256 NWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQN---HW 331 (872)
Q Consensus 256 l~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~---G~ 331 (872)
.-+..+++..|.+|..+. ..+..+++.+.+.+. +..+|+++.. .+-....+. +++.+|+. ++
T Consensus 17 ~~~~~~l~~~G~~V~~lg-----~~~~~~~l~~~~~~~-------~pdvV~iS~~--~~~~~~~~~~~i~~l~~~~~~~~ 82 (119)
T cd02067 17 NIVARALRDAGFEVIDLG-----VDVPPEEIVEAAKEE-------DADAIGLSGL--LTTHMTLMKEVIEELKEAGLDDI 82 (119)
T ss_pred HHHHHHHHHCCCEEEECC-----CCCCHHHHHHHHHHc-------CCCEEEEecc--ccccHHHHHHHHHHHHHcCCCCC
Confidence 334566788999997653 346778888777642 3567777543 122334443 56666655 46
Q ss_pred EEEeeccccCCCCCccCCCCCCCCcEEEEcc
Q 002866 332 HVLLDAGSLGPKDMDSLGLSLFRPDFIITSF 362 (872)
Q Consensus 332 ~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~ 362 (872)
.+++=+.+.... +=-+...++|.++...
T Consensus 83 ~i~vGG~~~~~~---~~~~~~~G~D~~~~~~ 110 (119)
T cd02067 83 PVLVGGAIVTRD---FKFLKEIGVDAYFGPA 110 (119)
T ss_pred eEEEECCCCChh---HHHHHHcCCeEEECCH
Confidence 666655543321 1124456788776543
No 490
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=21.73 E-value=4.2e+02 Score=30.48 Aligned_cols=123 Identities=16% Similarity=0.250 Sum_probs=66.3
Q ss_pred eeechhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC------------ccccceEEEEe
Q 002866 689 IICRHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK------------YERGAAVAFNV 756 (872)
Q Consensus 689 i~c~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~------------~~RG~~VAFNv 756 (872)
+..|||.++ .+=|..++.-...|.+||- .||. +-+||=|.-. ..-|+.|+|.+
T Consensus 240 l~~rgl~tl-~~R~~~~~~na~~la~~L~------~~p~--------v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~ 304 (386)
T PRK08045 240 LLLRGLRTL-VPRMELAQRNAQAIVKYLQ------TQPL--------VKKLYHPSLPENQGHEIAARQQKGFGAMLSFEL 304 (386)
T ss_pred HHHhhhccH-HHHHHHHHHHHHHHHHHHH------cCCC--------EeEEECCCCCCCcCHHHHHHhCCCCCceEEEEe
Confidence 445566542 1225666666777778776 3542 2355544321 12489999999
Q ss_pred ccCCCCccChHHHHHHHHHcCCe-Eee--c----ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEE
Q 002866 757 RDKERGLINPEVVQKLAEKEGIS-LGI--G----FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVV 829 (872)
Q Consensus 757 ~d~~G~~v~p~~VqkLAdr~~Is-Lr~--G----~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvV 829 (872)
.+ +...+.++.++-.+- +.+ | ..+|+....++... .......| +..+.|
T Consensus 305 ~~------~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~----------~~~~~~~g--------i~~~li 360 (386)
T PRK08045 305 DG------DEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMA----------PEARAAAG--------ISETLL 360 (386)
T ss_pred cC------cHHHHHHHHHhccceeEeccCCCCceeEeCCCCcccccCC----------HHHHHhcC--------CCCCeE
Confidence 53 356678888865542 333 2 11222111111000 00000122 236799
Q ss_pred EEeccccCCHHHHHHHHHHHHHhcC
Q 002866 830 TASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 830 rASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
|.|.|+ ||++-||+=+.+-|+
T Consensus 361 R~svGl----E~~~dl~~dl~~al~ 381 (386)
T PRK08045 361 RISTGI----EDGEDLIADLENGFR 381 (386)
T ss_pred EEEeCc----CCHHHHHHHHHHHHH
Confidence 999998 888888887776543
No 491
>PF10518 TAT_signal: TAT (twin-arginine translocation) pathway signal sequence; InterPro: IPR019546 The twin-arginine translocation (Tat) pathway serves the role of transporting folded proteins across energy-transducing membranes []. Homologues of the genes that encode the transport apparatus occur in archaea, bacteria, chloroplasts, and plant mitochondria []. In bacteria, the Tat pathway catalyses the export of proteins from the cytoplasm across the inner/cytoplasmic membrane. In chloroplasts, the Tat components are found in the thylakoid membrane and direct the import of proteins from the stroma. The Tat pathway acts separately from the general secretory (Sec) pathway, which transports proteins in an unfolded state []. It is generally accepted that the primary role of the Tat system is to translocate fully folded proteins across membranes. An example of proteins that need to be exported in their 3D conformation are redox proteins that have acquired complex multi-atom cofactors in the bacterial cytoplasm (or the chloroplast stroma or mitochondrial matrix). They include hydrogenases, formate dehydrogenases, nitrate reductases, trimethylamine N-oxide (TMAO) reductases and dimethyl sulphoxide (DMSO) reductases [, ]. The Tat system can also export whole heteroligomeric complexes in which some proteins have no Tat signal. This is the case of the DMSO reductase or formate dehydrogenase complexes. But there are also other cases where the physiological rationale for targeting a protein to the Tat signal is less obvious. Indeed, there are examples of homologous proteins that are in some cases targeted to the Tat pathway and in other cases to the Sec apparatus. Some examples are: copper nitrite reductases, flavin domains of flavocytochrome c and N-acetylmuramoyl-L-alanine amidases []. In halophilic archaea such as Halobacterium almost all secreted proteins appear to be Tat targeted. It has been proposed to be a response to the difficulties these organisms would otherwise face in successfully folding proteins extracellularly at high ionic strength []. The Tat signal peptide consists of three motifs: the positively charged N-terminal motif, the hydrophobic region and the C-terminal region that generally ends with a consensus short motif (A-x-A) specifying cleavage by signal peptidase. Sequence analysis revealed that signal peptides capable of targeting the Tat protein contain the consensus sequence [ST]-R-R-x-F-L-K. The nearly invariant twin-arginine gave rise to the pathway's name. In addition the h-region of Tat signal peptides is typically less hydrophobic than that of Sec-specific signal peptides [, ].
Probab=21.39 E-value=59 Score=23.75 Aligned_cols=13 Identities=46% Similarity=0.721 Sum_probs=10.8
Q ss_pred HHHHHHHHHhhhh
Q 002866 91 AQREFLRATALAA 103 (872)
Q Consensus 91 ~rr~f~~~~~~~~ 103 (872)
+||+||+..+..+
T Consensus 3 sRR~fLk~~~a~~ 15 (26)
T PF10518_consen 3 SRRQFLKGGAAAA 15 (26)
T ss_pred cHHHHHHHHHHHH
Confidence 7999999977754
Done!