Query 002866
Match_columns 872
No_of_seqs 275 out of 1675
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 04:39:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002866.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002866hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qm2_A Phosphoserine aminotran 100.0 8.4E-35 2.9E-39 321.2 15.3 202 150-388 27-244 (386)
2 3e77_A Phosphoserine aminotran 100.0 5.2E-34 1.8E-38 314.5 16.4 204 150-388 13-229 (377)
3 3m5u_A Phosphoserine aminotran 100.0 6.9E-32 2.4E-36 295.5 18.1 197 150-388 5-216 (361)
4 1kmj_A Selenocysteine lyase; p 100.0 8E-29 2.7E-33 263.5 34.6 225 135-389 4-249 (406)
5 3e9k_A Kynureninase; kynurenin 100.0 1.1E-29 3.6E-34 280.7 26.3 237 135-389 38-301 (465)
6 3cai_A Possible aminotransfera 100.0 1.2E-28 4.1E-33 264.3 28.5 224 135-388 12-249 (406)
7 4hvk_A Probable cysteine desul 100.0 2E-27 6.7E-32 249.6 30.1 203 150-382 1-215 (382)
8 1t3i_A Probable cysteine desul 100.0 1.4E-26 4.9E-31 247.8 35.4 225 135-389 9-254 (420)
9 1elu_A L-cysteine/L-cystine C- 100.0 1E-26 3.5E-31 246.6 33.6 232 135-389 3-244 (390)
10 2z9v_A Aspartate aminotransfer 100.0 2.2E-26 7.5E-31 245.2 31.4 217 143-388 2-219 (392)
11 4eb5_A Probable cysteine desul 100.0 4.7E-26 1.6E-30 240.8 31.4 202 150-381 1-214 (382)
12 3a9z_A Selenocysteine lyase; P 99.9 1E-25 3.6E-30 244.4 28.0 215 139-382 8-262 (432)
13 1qz9_A Kynureninase; kynurenin 99.9 1.6E-25 5.5E-30 240.9 27.8 229 119-388 5-251 (416)
14 2dr1_A PH1308 protein, 386AA l 99.9 1E-24 3.6E-29 230.8 31.4 223 137-388 8-231 (386)
15 3lvm_A Cysteine desulfurase; s 99.9 3.1E-24 1E-28 231.4 34.6 215 147-388 20-247 (423)
16 3vax_A Putative uncharacterize 99.9 2.3E-25 7.9E-30 237.9 23.6 204 148-381 19-236 (400)
17 1eg5_A Aminotransferase; PLP-d 99.9 1.2E-23 4.1E-28 222.0 34.4 203 151-382 3-219 (384)
18 3zrp_A Serine-pyruvate aminotr 99.9 1.2E-23 4.1E-28 222.0 31.6 206 152-386 4-210 (384)
19 2huf_A Alanine glyoxylate amin 99.9 1.1E-23 3.6E-28 224.6 29.9 217 143-388 11-229 (393)
20 2z67_A O-phosphoseryl-tRNA(SEC 99.9 6.4E-26 2.2E-30 252.1 12.7 243 127-386 58-320 (456)
21 1vjo_A Alanine--glyoxylate ami 99.9 1.6E-23 5.5E-28 223.6 28.7 223 135-387 19-243 (393)
22 3nnk_A Ureidoglycine-glyoxylat 99.9 6.6E-23 2.3E-27 219.3 31.8 216 144-388 6-223 (411)
23 2c0r_A PSAT, phosphoserine ami 99.9 4.2E-24 1.4E-28 226.6 22.3 209 149-387 3-218 (362)
24 3ffr_A Phosphoserine aminotran 99.9 1.7E-23 5.8E-28 219.2 25.6 209 151-389 5-215 (362)
25 2bkw_A Alanine-glyoxylate amin 99.9 2.4E-23 8.1E-28 220.3 27.0 210 150-387 5-224 (385)
26 1iug_A Putative aspartate amin 99.9 3.2E-23 1.1E-27 216.7 27.6 202 152-387 3-207 (352)
27 2ch1_A 3-hydroxykynurenine tra 99.9 2.8E-23 9.6E-28 221.5 27.6 216 143-387 10-227 (396)
28 2yrr_A Aminotransferase, class 99.9 9.7E-23 3.3E-27 212.2 28.6 206 152-387 2-208 (353)
29 1m32_A 2-aminoethylphosphonate 99.9 9.9E-22 3.4E-26 205.6 31.8 208 152-387 6-215 (366)
30 3isl_A Purine catabolism prote 99.9 5.7E-22 2E-26 212.3 29.6 178 196-388 43-221 (416)
31 3kgw_A Alanine-glyoxylate amin 99.9 7.7E-22 2.6E-26 208.9 27.8 210 150-388 23-233 (393)
32 3f0h_A Aminotransferase; RER07 99.9 1.4E-21 4.7E-26 207.1 26.9 209 150-388 19-229 (376)
33 2qma_A Diaminobutyrate-pyruvat 99.9 4.2E-20 1.4E-24 207.0 33.2 228 135-382 83-342 (497)
34 3ke3_A Putative serine-pyruvat 99.9 6.4E-21 2.2E-25 205.6 24.0 176 195-388 33-222 (379)
35 2jis_A Cysteine sulfinic acid 99.9 2.8E-20 9.4E-25 209.9 29.9 211 150-381 109-343 (515)
36 2okj_A Glutamate decarboxylase 99.9 1.4E-19 4.9E-24 203.0 30.4 215 150-381 93-329 (504)
37 3f9t_A TDC, L-tyrosine decarbo 99.9 3E-19 1E-23 188.4 30.7 203 150-382 32-263 (397)
38 1w23_A Phosphoserine aminotran 99.8 1.1E-20 3.6E-25 199.1 16.5 207 150-387 3-217 (360)
39 2dgk_A GAD-beta, GADB, glutama 99.8 1E-18 3.4E-23 193.0 30.9 175 193-381 77-278 (452)
40 2e7j_A SEP-tRNA:Cys-tRNA synth 99.8 2.6E-20 9E-25 196.5 16.9 215 149-388 8-233 (371)
41 1wyu_A Glycine dehydrogenase ( 99.8 1.4E-19 4.7E-24 199.2 21.8 167 196-388 107-284 (438)
42 2fyf_A PSAT, phosphoserine ami 99.8 2.1E-19 7.3E-24 193.9 22.9 204 148-387 38-244 (398)
43 3hbx_A GAD 1, glutamate decarb 99.8 3.6E-18 1.2E-22 193.0 32.5 208 150-381 57-293 (502)
44 2cb1_A O-acetyl homoserine sul 99.8 9.6E-19 3.3E-23 191.3 24.7 162 197-382 56-220 (412)
45 1rv3_A Serine hydroxymethyltra 99.8 1.7E-19 5.8E-24 202.6 14.2 206 149-384 45-274 (483)
46 3ffh_A Histidinol-phosphate am 99.8 3.9E-17 1.3E-21 172.9 28.0 228 124-386 10-247 (363)
47 3k40_A Aromatic-L-amino-acid d 99.8 4.6E-17 1.6E-21 182.8 29.1 230 135-382 56-319 (475)
48 1js3_A DDC;, DOPA decarboxylas 99.8 5.4E-17 1.8E-21 180.8 29.2 229 135-381 56-319 (486)
49 1gc0_A Methionine gamma-lyase; 99.8 7.4E-18 2.5E-22 183.2 19.8 200 150-383 28-231 (398)
50 1svv_A Threonine aldolase; str 99.8 5.3E-18 1.8E-22 177.3 17.6 212 149-387 14-237 (359)
51 3frk_A QDTB; aminotransferase, 99.8 1.9E-17 6.5E-22 176.6 19.1 160 197-380 36-201 (373)
52 3euc_A Histidinol-phosphate am 99.7 1.6E-16 5.4E-21 168.5 25.1 207 149-385 31-247 (367)
53 3mc6_A Sphingosine-1-phosphate 99.7 6.4E-17 2.2E-21 180.2 22.5 175 196-383 106-298 (497)
54 2vi8_A Serine hydroxymethyltra 99.7 4.4E-17 1.5E-21 174.2 18.6 212 150-386 24-246 (405)
55 3mad_A Sphingosine-1-phosphate 99.7 3.1E-16 1E-20 176.2 24.7 174 195-383 137-330 (514)
56 4e1o_A HDC, histidine decarbox 99.7 7.8E-16 2.7E-20 172.7 27.3 182 193-382 114-326 (481)
57 2bwn_A 5-aminolevulinate synth 99.7 6.7E-17 2.3E-21 173.7 16.6 218 130-380 20-261 (401)
58 3get_A Histidinol-phosphate am 99.7 2.7E-16 9.4E-21 166.5 16.8 228 125-387 9-250 (365)
59 1pff_A Methionine gamma-lyase; 99.7 5.2E-17 1.8E-21 170.1 10.6 166 201-390 2-173 (331)
60 3vp6_A Glutamate decarboxylase 99.7 6.1E-16 2.1E-20 175.4 18.0 214 150-382 96-333 (511)
61 3p1t_A Putative histidinol-pho 99.7 8.8E-16 3E-20 160.2 17.3 204 148-389 16-223 (337)
62 2fnu_A Aminotransferase; prote 99.7 1.4E-15 4.9E-20 160.6 18.0 194 151-387 4-205 (375)
63 1v2d_A Glutamine aminotransfer 99.7 1E-15 3.5E-20 163.4 16.1 208 149-387 26-245 (381)
64 3ftb_A Histidinol-phosphate am 99.7 2.2E-14 7.7E-19 151.0 26.0 193 149-377 27-228 (361)
65 2c81_A Glutamine-2-deoxy-scyll 99.7 1.6E-14 5.4E-19 157.0 25.5 167 197-387 42-214 (418)
66 2dkj_A Serine hydroxymethyltra 99.6 2.2E-15 7.6E-20 161.2 18.3 171 198-386 70-247 (407)
67 3dr4_A Putative perosamine syn 99.6 8E-15 2.7E-19 157.3 22.4 160 197-380 56-220 (391)
68 2fq6_A Cystathionine beta-lyas 99.6 7.8E-16 2.7E-20 170.7 15.0 166 198-387 83-254 (415)
69 1qgn_A Protein (cystathionine 99.6 8.6E-16 2.9E-20 172.4 15.5 165 197-386 114-284 (445)
70 2ctz_A O-acetyl-L-homoserine s 99.6 8.3E-16 2.8E-20 169.2 14.4 159 197-379 58-221 (421)
71 1cs1_A CGS, protein (cystathio 99.6 1.2E-15 4.1E-20 164.3 15.0 167 197-387 52-223 (386)
72 2rfv_A Methionine gamma-lyase; 99.6 1.9E-15 6.6E-20 163.6 15.9 205 150-388 27-236 (398)
73 3ly1_A Putative histidinol-pho 99.6 5.3E-15 1.8E-19 155.6 18.2 211 149-388 17-237 (354)
74 2z61_A Probable aspartate amin 99.6 4.1E-15 1.4E-19 158.1 17.2 202 149-387 30-245 (370)
75 1n8p_A Cystathionine gamma-lya 99.6 5.4E-16 1.8E-20 169.5 10.5 164 197-387 55-228 (393)
76 1gd9_A Aspartate aminotransfer 99.6 6.7E-15 2.3E-19 157.2 18.7 212 148-387 26-256 (389)
77 1o4s_A Aspartate aminotransfer 99.6 1.9E-15 6.4E-20 162.7 14.4 209 149-387 42-269 (389)
78 1wyu_B Glycine dehydrogenase s 99.6 2.6E-15 8.8E-20 167.7 15.7 208 149-387 67-293 (474)
79 3g0t_A Putative aminotransfera 99.6 5.1E-15 1.7E-19 160.5 16.2 211 149-384 45-280 (437)
80 3dzz_A Putative pyridoxal 5'-p 99.6 1.1E-14 3.8E-19 154.6 18.2 212 149-387 28-258 (391)
81 3acz_A Methionine gamma-lyase; 99.6 7.8E-15 2.7E-19 159.5 17.3 167 197-387 59-230 (389)
82 1e5e_A MGL, methionine gamma-l 99.6 5.9E-15 2E-19 161.6 15.7 169 197-389 62-236 (404)
83 3cq5_A Histidinol-phosphate am 99.6 7.7E-14 2.6E-18 148.8 23.0 211 150-388 32-255 (369)
84 3nra_A Aspartate aminotransfer 99.6 3E-14 1E-18 152.4 19.8 214 150-387 41-276 (407)
85 1u08_A Hypothetical aminotrans 99.6 2.7E-14 9.2E-19 152.7 19.2 210 149-387 31-259 (386)
86 3qhx_A Cystathionine gamma-syn 99.6 1.3E-14 4.6E-19 158.2 17.1 159 197-380 66-229 (392)
87 3nyt_A Aminotransferase WBPE; 99.6 4.8E-15 1.6E-19 158.3 12.9 190 151-379 3-198 (367)
88 1bs0_A Protein (8-amino-7-oxon 99.6 3.7E-14 1.3E-18 151.2 19.4 208 149-387 38-256 (384)
89 1xi9_A Putative transaminase; 99.6 6.5E-15 2.2E-19 159.1 13.3 202 149-380 39-263 (406)
90 1jg8_A L-ALLO-threonine aldola 99.6 4.3E-15 1.5E-19 156.0 11.5 211 150-386 5-223 (347)
91 3a2b_A Serine palmitoyltransfe 99.6 3.9E-14 1.3E-18 152.0 19.1 169 197-387 88-263 (398)
92 1fc4_A 2-amino-3-ketobutyrate 99.6 5.6E-14 1.9E-18 150.6 19.9 209 148-387 43-268 (401)
93 1v72_A Aldolase; PLP-dependent 99.6 1.8E-14 6.1E-19 150.8 15.5 210 149-387 8-233 (356)
94 3cog_A Cystathionine gamma-lya 99.6 2.1E-14 7.3E-19 157.6 16.4 168 190-386 64-237 (403)
95 1b9h_A AHBA synthase, protein 99.6 1.8E-14 6.1E-19 154.1 15.0 162 197-381 38-203 (388)
96 4dq6_A Putative pyridoxal phos 99.6 3.3E-14 1.1E-18 151.0 16.8 222 136-387 21-262 (391)
97 2o0r_A RV0858C (N-succinyldiam 99.6 2.8E-14 9.7E-19 154.3 16.6 210 149-387 26-256 (411)
98 1j32_A Aspartate aminotransfer 99.6 7.5E-14 2.6E-18 149.0 19.5 211 149-387 31-260 (388)
99 1lc5_A COBD, L-threonine-O-3-p 99.6 2.6E-14 8.9E-19 151.9 15.4 203 150-387 26-240 (364)
100 3hvy_A Cystathionine beta-lyas 99.6 7.9E-15 2.7E-19 164.1 11.7 221 137-388 29-269 (427)
101 1yiz_A Kynurenine aminotransfe 99.6 3.7E-14 1.3E-18 154.0 16.2 212 149-387 38-278 (429)
102 3uwc_A Nucleotide-sugar aminot 99.6 4.7E-14 1.6E-18 149.6 16.6 160 197-380 38-202 (374)
103 1bw0_A TAT, protein (tyrosine 99.6 6.7E-14 2.3E-18 151.1 17.9 203 148-381 33-270 (416)
104 3dyd_A Tyrosine aminotransfera 99.5 4.2E-14 1.5E-18 154.8 16.4 201 150-381 56-280 (427)
105 2zyj_A Alpha-aminodipate amino 99.5 7E-15 2.4E-19 158.1 10.0 212 149-387 33-260 (397)
106 3ele_A Amino transferase; RER0 99.5 2E-13 6.7E-18 146.3 21.0 210 149-384 36-268 (398)
107 2gb3_A Aspartate aminotransfer 99.5 1.8E-14 6.3E-19 156.0 12.9 205 149-387 44-268 (409)
108 1ibj_A CBL, cystathionine beta 99.5 1.7E-14 5.9E-19 162.3 13.1 165 198-387 134-303 (464)
109 2w8t_A SPT, serine palmitoyltr 99.5 4.8E-13 1.6E-17 146.4 24.2 167 197-388 109-285 (427)
110 3kax_A Aminotransferase, class 99.5 4.4E-14 1.5E-18 149.6 15.4 211 149-387 25-254 (383)
111 1d2f_A MALY protein; aminotran 99.5 4E-13 1.4E-17 143.8 22.4 205 148-384 28-254 (390)
112 2dou_A Probable N-succinyldiam 99.5 1.3E-13 4.5E-18 146.8 18.4 210 150-387 27-253 (376)
113 1o69_A Aminotransferase; struc 99.5 8E-14 2.7E-18 150.8 16.7 170 197-387 32-206 (394)
114 3n0l_A Serine hydroxymethyltra 99.5 2.2E-14 7.6E-19 153.9 11.5 172 197-387 71-249 (417)
115 3hdo_A Histidinol-phosphate am 99.5 2.6E-14 8.9E-19 151.7 11.8 206 149-387 27-237 (360)
116 1b5p_A Protein (aspartate amin 99.5 5.3E-14 1.8E-18 151.2 14.4 209 149-387 32-257 (385)
117 3tqx_A 2-amino-3-ketobutyrate 99.5 9.5E-14 3.3E-18 147.9 15.9 170 197-387 88-266 (399)
118 1c7n_A Cystalysin; transferase 99.5 3.8E-13 1.3E-17 144.1 20.4 223 131-386 13-261 (399)
119 2x3l_A ORN/Lys/Arg decarboxyla 99.5 2.7E-14 9.2E-19 158.9 11.2 165 197-384 57-230 (446)
120 2eh6_A Acoat, acetylornithine 99.5 4.3E-14 1.5E-18 149.9 12.1 210 148-388 26-264 (375)
121 3ruy_A Ornithine aminotransfer 99.5 1.4E-12 4.9E-17 139.6 23.6 205 149-386 35-273 (392)
122 3fdb_A Beta C-S lyase, putativ 99.5 8.7E-14 3E-18 147.4 13.8 202 150-386 25-246 (377)
123 2aeu_A Hypothetical protein MJ 99.5 4.7E-14 1.6E-18 152.7 12.0 192 150-387 29-229 (374)
124 2oga_A Transaminase; PLP-depen 99.5 1.2E-13 4.2E-18 149.3 15.2 200 150-387 30-236 (399)
125 1uu1_A Histidinol-phosphate am 99.5 6.2E-14 2.1E-18 147.6 12.5 198 148-387 19-225 (335)
126 2zc0_A Alanine glyoxylate tran 99.5 2E-13 7E-18 146.6 16.5 179 199-387 77-269 (407)
127 3jzl_A Putative cystathionine 99.5 4.8E-14 1.6E-18 156.7 11.8 175 198-388 60-252 (409)
128 2x5d_A Probable aminotransfera 99.5 8E-14 2.7E-18 150.8 13.3 211 149-387 38-268 (412)
129 1vef_A Acetylornithine/acetyl- 99.5 3.6E-14 1.2E-18 152.2 10.4 206 149-387 44-276 (395)
130 1mdo_A ARNB aminotransferase; 99.5 1.1E-13 3.9E-18 147.6 14.1 168 197-388 39-211 (393)
131 2a7v_A Serine hydroxymethyltra 99.5 8.4E-14 2.9E-18 158.5 13.7 201 156-382 61-282 (490)
132 3i16_A Aluminum resistance pro 99.5 6.8E-14 2.3E-18 156.6 12.8 176 199-388 75-269 (427)
133 3h14_A Aminotransferase, class 99.5 2.5E-13 8.6E-18 145.4 16.5 207 149-386 32-252 (391)
134 1fg7_A Histidinol phosphate am 99.5 5.8E-14 2E-18 149.8 10.9 169 199-387 60-237 (356)
135 2o1b_A Aminotransferase, class 99.5 1.1E-13 3.9E-18 150.1 12.4 211 150-387 49-276 (404)
136 3e2y_A Kynurenine-oxoglutarate 99.5 1.4E-13 4.7E-18 147.8 12.0 211 149-387 24-263 (410)
137 2ez2_A Beta-tyrosinase, tyrosi 99.5 6.1E-13 2.1E-17 145.8 17.2 206 148-386 40-278 (456)
138 1ax4_A Tryptophanase; tryptoph 99.5 1.1E-13 3.8E-18 151.9 11.2 207 149-386 42-288 (467)
139 3b8x_A WBDK, pyridoxamine 5-ph 99.5 1.1E-12 3.7E-17 141.0 18.3 166 197-387 34-212 (390)
140 3jtx_A Aminotransferase; NP_28 99.5 1.5E-12 5.1E-17 139.1 19.0 210 150-387 32-268 (396)
141 3ndn_A O-succinylhomoserine su 99.5 4.8E-13 1.6E-17 148.1 15.4 161 198-383 82-247 (414)
142 1s0a_A Adenosylmethionine-8-am 99.4 4.7E-13 1.6E-17 145.9 14.5 218 149-387 42-297 (429)
143 3if2_A Aminotransferase; YP_26 99.4 8E-14 2.8E-18 152.0 8.4 179 199-386 85-297 (444)
144 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.4 9.4E-13 3.2E-17 144.6 16.7 163 197-382 62-236 (437)
145 3l8a_A METC, putative aminotra 99.4 9.5E-13 3.2E-17 143.4 16.6 176 196-387 99-292 (421)
146 7aat_A Aspartate aminotransfer 99.4 1.3E-12 4.6E-17 140.3 17.2 205 150-379 36-265 (401)
147 3ju7_A Putative PLP-dependent 99.4 1.1E-12 3.7E-17 142.8 16.3 159 198-378 37-202 (377)
148 2x5f_A Aspartate_tyrosine_phen 99.4 2.4E-13 8.2E-18 147.9 10.7 175 199-387 90-297 (430)
149 3op7_A Aminotransferase class 99.4 2.7E-13 9.3E-18 144.1 10.7 172 200-388 66-246 (375)
150 3fvs_A Kynurenine--oxoglutarat 99.4 7.6E-13 2.6E-17 142.8 14.2 211 149-386 29-269 (422)
151 3fsl_A Aromatic-amino-acid ami 99.4 1.2E-12 4E-17 140.0 15.5 208 150-379 34-262 (397)
152 3gbx_A Serine hydroxymethyltra 99.4 3.1E-13 1E-17 144.9 11.0 172 197-387 76-256 (420)
153 3ri6_A O-acetylhomoserine sulf 99.4 1.2E-12 4E-17 146.2 15.7 158 198-379 83-243 (430)
154 2ay1_A Aroat, aromatic amino a 99.4 2.4E-13 8.4E-18 145.4 9.5 204 150-378 34-257 (394)
155 1vp4_A Aminotransferase, putat 99.4 5.1E-13 1.7E-17 145.7 12.1 179 199-387 87-282 (425)
156 2q7w_A Aspartate aminotransfer 99.4 7.7E-13 2.6E-17 141.3 13.0 204 150-378 34-260 (396)
157 2vyc_A Biodegradative arginine 99.4 1.8E-12 6.1E-17 154.5 17.2 175 197-381 205-402 (755)
158 3fkd_A L-threonine-O-3-phospha 99.4 2.8E-12 9.7E-17 135.2 16.7 200 149-389 16-222 (350)
159 3ht4_A Aluminum resistance pro 99.4 3.4E-13 1.2E-17 150.5 10.2 178 197-388 65-258 (431)
160 3asa_A LL-diaminopimelate amin 99.4 2.9E-12 1E-16 138.3 16.9 202 149-383 34-255 (400)
161 2po3_A 4-dehydrase; external a 99.4 1.9E-12 6.3E-17 141.2 15.0 165 197-387 52-222 (424)
162 3ezs_A Aminotransferase ASPB; 99.4 1.9E-12 6.6E-17 137.3 14.7 208 149-387 24-254 (376)
163 4f4e_A Aromatic-amino-acid ami 99.4 2.5E-12 8.6E-17 140.0 15.7 206 150-378 57-283 (420)
164 1yaa_A Aspartate aminotransfer 99.4 7E-13 2.4E-17 143.2 10.9 204 150-377 37-267 (412)
165 1c4k_A Protein (ornithine deca 99.4 9E-13 3.1E-17 156.7 12.6 178 197-383 173-373 (730)
166 1iay_A ACC synthase 2, 1-amino 99.4 9E-13 3.1E-17 143.3 11.6 178 199-386 85-291 (428)
167 3ecd_A Serine hydroxymethyltra 99.4 5.3E-12 1.8E-16 135.5 16.5 167 197-380 78-249 (425)
168 2oqx_A Tryptophanase; lyase, p 99.4 1.3E-12 4.6E-17 143.3 11.0 200 149-381 40-281 (467)
169 3aow_A Putative uncharacterize 99.4 4.3E-12 1.5E-16 140.8 15.1 176 199-387 120-311 (448)
170 3b46_A Aminotransferase BNA3; 99.3 3.1E-12 1.1E-16 141.1 12.9 170 200-386 98-297 (447)
171 1ajs_A Aspartate aminotransfer 99.3 1.8E-12 6.1E-17 139.8 10.5 205 150-378 38-272 (412)
172 3meb_A Aspartate aminotransfer 99.3 7.4E-12 2.5E-16 138.5 14.9 201 150-376 57-289 (448)
173 3ppl_A Aspartate aminotransfer 99.3 1.8E-12 6.1E-17 141.2 9.7 173 199-387 80-282 (427)
174 2r2n_A Kynurenine/alpha-aminoa 99.3 1E-11 3.6E-16 135.6 15.3 177 201-387 82-285 (425)
175 3piu_A 1-aminocyclopropane-1-c 99.3 4.8E-12 1.6E-16 138.2 12.4 170 200-380 89-289 (435)
176 3h7f_A Serine hydroxymethyltra 99.3 5.9E-12 2E-16 139.3 13.2 172 199-388 93-270 (447)
177 2eo5_A 419AA long hypothetical 99.3 2.6E-11 8.8E-16 132.5 17.9 217 149-386 41-302 (419)
178 3ez1_A Aminotransferase MOCR f 99.3 7.3E-12 2.5E-16 135.7 13.3 174 199-387 72-275 (423)
179 3qgu_A LL-diaminopimelate amin 99.3 1.5E-11 5.1E-16 134.6 15.7 202 149-384 70-302 (449)
180 2ord_A Acoat, acetylornithine 99.3 1.3E-11 4.5E-16 132.6 14.0 203 149-387 39-273 (397)
181 3nmy_A Xometc, cystathionine g 99.3 2.5E-11 8.6E-16 133.8 16.3 154 198-375 68-224 (400)
182 3t18_A Aminotransferase class 99.3 2.6E-11 8.8E-16 131.0 14.6 214 150-387 45-287 (413)
183 1sff_A 4-aminobutyrate aminotr 99.3 6.1E-11 2.1E-15 128.1 16.7 176 197-387 84-290 (426)
184 3rq1_A Aminotransferase class 99.3 3.4E-11 1.2E-15 130.2 14.4 216 150-387 46-288 (418)
185 3ei9_A LL-diaminopimelate amin 99.2 7E-11 2.4E-15 128.6 16.0 205 149-382 57-288 (432)
186 3g7q_A Valine-pyruvate aminotr 99.2 6.9E-12 2.4E-16 134.9 7.7 175 199-387 77-272 (417)
187 3kki_A CAI-1 autoinducer synth 99.2 1.2E-10 4.1E-15 125.9 17.2 163 198-387 105-276 (409)
188 3d6k_A Putative aminotransfera 99.2 2.2E-11 7.4E-16 132.9 10.3 172 199-387 78-280 (422)
189 3tcm_A Alanine aminotransferas 99.2 1.5E-10 5E-15 130.6 15.8 177 200-386 137-343 (500)
190 3pj0_A LMO0305 protein; struct 99.2 1.5E-11 5.2E-16 129.6 6.4 172 197-387 48-229 (359)
191 3f6t_A Aspartate aminotransfer 99.2 8.3E-11 2.8E-15 134.1 12.2 167 200-381 141-330 (533)
192 3a8u_X Omega-amino acid--pyruv 99.1 1.1E-10 3.9E-15 128.0 11.3 216 149-388 49-312 (449)
193 3nx3_A Acoat, acetylornithine 99.1 1.7E-10 5.8E-15 123.9 12.2 207 149-388 35-272 (395)
194 3lws_A Aromatic amino acid bet 99.1 1.9E-11 6.6E-16 129.0 4.5 167 198-387 48-227 (357)
195 3n75_A LDC, lysine decarboxyla 99.1 2.9E-10 1E-14 135.0 15.0 170 197-381 195-383 (715)
196 4adb_A Succinylornithine trans 99.1 1.5E-10 5E-15 124.1 11.3 207 149-388 38-275 (406)
197 1z7d_A Ornithine aminotransfer 99.1 7.7E-10 2.6E-14 122.0 17.3 207 148-387 63-304 (433)
198 2cjg_A L-lysine-epsilon aminot 99.1 2.1E-10 7E-15 127.2 12.6 219 148-388 52-319 (449)
199 2pb2_A Acetylornithine/succiny 99.1 5.7E-10 2E-14 122.2 13.3 207 149-387 56-292 (420)
200 3b1d_A Betac-S lyase; HET: PLP 98.6 1.6E-11 5.6E-16 131.9 0.0 177 199-389 68-264 (392)
201 3bwn_A AT1G70560, L-tryptophan 99.0 1.1E-10 3.8E-15 126.9 6.1 159 200-387 71-241 (391)
202 3l44_A Glutamate-1-semialdehyd 99.0 1E-09 3.5E-14 119.8 12.7 209 148-388 53-293 (434)
203 4e77_A Glutamate-1-semialdehyd 99.0 4.4E-09 1.5E-13 114.8 17.5 209 148-388 51-291 (429)
204 2oat_A Ornithine aminotransfer 99.0 2.2E-09 7.5E-14 118.8 14.9 208 149-387 75-315 (439)
205 1zod_A DGD, 2,2-dialkylglycine 99.0 4.9E-10 1.7E-14 122.0 9.0 219 149-387 42-294 (433)
206 3dxv_A Alpha-amino-epsilon-cap 99.0 5.1E-09 1.7E-13 114.4 16.7 221 149-388 42-293 (439)
207 3fq8_A Glutamate-1-semialdehyd 99.0 9.2E-10 3.2E-14 119.8 9.8 209 149-388 51-290 (427)
208 2cy8_A D-phgat, D-phenylglycin 99.0 3.4E-09 1.2E-13 116.7 14.3 207 149-388 56-292 (453)
209 3k28_A Glutamate-1-semialdehyd 98.9 3.1E-09 1.1E-13 116.2 11.6 210 148-388 51-291 (429)
210 2epj_A Glutamate-1-semialdehyd 98.9 2.7E-09 9.2E-14 116.6 10.1 210 148-388 54-294 (434)
211 2hox_A ALLIIN lyase 1; cystein 98.9 5E-10 1.7E-14 123.9 2.7 158 199-387 102-275 (427)
212 3bc8_A O-phosphoseryl-tRNA(SEC 98.9 3.9E-09 1.3E-13 119.5 9.6 173 197-380 98-281 (450)
213 3i4j_A Aminotransferase, class 98.8 1.4E-08 4.9E-13 110.6 13.1 219 149-387 28-284 (430)
214 4eu1_A Mitochondrial aspartate 98.8 6.4E-08 2.2E-12 104.6 18.0 164 200-376 82-270 (409)
215 3ihj_A Alanine aminotransferas 98.8 6.3E-08 2.2E-12 109.4 18.1 171 200-378 132-331 (498)
216 3n5m_A Adenosylmethionine-8-am 98.8 2.6E-08 8.8E-13 109.7 13.8 218 149-388 48-308 (452)
217 2zy4_A L-aspartate beta-decarb 98.8 8.8E-09 3E-13 118.2 10.4 156 218-386 167-338 (546)
218 4a6r_A Omega transaminase; tra 98.8 6.5E-08 2.2E-12 107.2 14.9 219 149-387 49-311 (459)
219 3tfu_A Adenosylmethionine-8-am 98.7 3.7E-08 1.3E-12 110.0 11.9 220 148-387 71-326 (457)
220 1ohv_A 4-aminobutyrate aminotr 98.7 3.2E-07 1.1E-11 102.8 18.9 208 148-367 61-333 (472)
221 3gju_A Putative aminotransfera 98.7 1E-07 3.4E-12 105.7 14.4 220 149-387 50-313 (460)
222 2e7u_A Glutamate-1-semialdehyd 98.7 2.5E-08 8.4E-13 108.7 9.4 208 149-388 51-289 (424)
223 3dod_A Adenosylmethionine-8-am 98.7 2.2E-07 7.4E-12 102.5 15.3 218 149-388 43-304 (448)
224 3oks_A 4-aminobutyrate transam 98.6 5.2E-07 1.8E-11 100.0 16.8 223 148-388 59-319 (451)
225 4ffc_A 4-aminobutyrate aminotr 98.6 2.9E-07 1E-11 102.2 14.7 222 149-388 63-317 (453)
226 3hmu_A Aminotransferase, class 98.6 2.8E-07 9.5E-12 103.5 13.5 220 148-387 53-315 (472)
227 3i5t_A Aminotransferase; pyrid 98.5 6.2E-07 2.1E-11 100.6 12.5 221 149-388 53-315 (476)
228 3hl2_A O-phosphoseryl-tRNA(SEC 98.2 3.4E-06 1.2E-10 96.1 10.0 166 204-381 123-300 (501)
229 2yky_A Beta-transaminase; tran 97.5 2.4E-07 8.3E-12 104.9 0.0 176 197-388 140-323 (465)
230 3ou5_A Serine hydroxymethyltra 98.1 2.2E-05 7.4E-10 89.3 14.6 172 197-382 100-282 (490)
231 3k7y_A Aspartate aminotransfer 98.1 5.2E-05 1.8E-09 83.8 17.4 166 200-378 75-263 (405)
232 4h51_A Aspartate aminotransfer 97.8 0.00022 7.6E-09 79.6 15.3 224 138-384 38-285 (420)
233 4ao9_A Beta-phenylalanine amin 97.5 0.00014 4.7E-09 82.4 7.8 210 148-389 85-311 (454)
234 4atq_A 4-aminobutyrate transam 96.2 0.073 2.5E-06 60.1 16.2 226 148-388 62-318 (456)
235 4e3q_A Pyruvate transaminase; 94.5 0.31 1.1E-05 55.3 13.8 221 149-387 66-328 (473)
236 3b8x_A WBDK, pyridoxamine 5-ph 93.5 0.28 9.5E-06 52.3 10.2 117 702-849 268-389 (390)
237 3bb8_A CDP-4-keto-6-deoxy-D-gl 93.3 0.4 1.4E-05 52.3 11.3 120 705-857 309-437 (437)
238 1pff_A Methionine gamma-lyase; 93.1 0.041 1.4E-06 57.1 2.9 88 737-852 234-330 (331)
239 2ctz_A O-acetyl-L-homoserine s 92.9 0.39 1.3E-05 52.6 10.5 105 710-853 295-420 (421)
240 2fnu_A Aminotransferase; prote 91.9 0.67 2.3E-05 48.4 10.4 125 699-854 243-370 (375)
241 1mdo_A ARNB aminotransferase; 91.7 0.71 2.4E-05 48.8 10.3 122 701-854 258-384 (393)
242 2w8t_A SPT, serine palmitoyltr 91.6 0.62 2.1E-05 50.7 10.1 107 692-854 306-413 (427)
243 1n8p_A Cystathionine gamma-lya 90.6 0.2 7E-06 54.4 5.0 84 749-852 305-391 (393)
244 3uwc_A Nucleotide-sugar aminot 90.1 0.69 2.4E-05 48.6 8.4 127 694-854 239-369 (374)
245 1fc4_A 2-amino-3-ketobutyrate 89.8 0.91 3.1E-05 48.2 9.1 106 692-854 290-395 (401)
246 1v72_A Aldolase; PLP-dependent 89.8 2 6.7E-05 44.4 11.4 88 704-854 264-351 (356)
247 1qgn_A Protein (cystathionine 89.7 0.57 2E-05 52.5 7.8 80 747-854 357-443 (445)
248 1b9h_A AHBA synthase, protein 89.4 1.1 3.8E-05 47.4 9.4 130 704-854 254-386 (388)
249 3hdo_A Histidinol-phosphate am 89.1 1.1 3.9E-05 46.9 9.1 92 702-855 263-354 (360)
250 1v2d_A Glutamine aminotransfer 88.9 2.2 7.6E-05 44.9 11.3 96 701-855 275-370 (381)
251 3get_A Histidinol-phosphate am 88.5 1.8 6.1E-05 45.3 10.1 90 701-853 275-364 (365)
252 3vp6_A Glutamate decarboxylase 88.5 2.2 7.4E-05 48.2 11.4 110 693-852 378-501 (511)
253 3p1t_A Putative histidinol-pho 88.5 1.6 5.3E-05 45.0 9.5 88 703-854 248-335 (337)
254 3dyd_A Tyrosine aminotransfera 88.4 1.9 6.5E-05 46.8 10.6 102 699-854 319-422 (427)
255 3fdb_A Beta C-S lyase, putativ 88.3 1.9 6.5E-05 45.1 10.1 98 702-854 276-374 (377)
256 1o69_A Aminotransferase; struc 88.3 1.6 5.4E-05 46.8 9.7 120 702-855 245-386 (394)
257 3ly1_A Putative histidinol-pho 88.0 1 3.5E-05 46.9 7.8 90 702-855 262-351 (354)
258 3kki_A CAI-1 autoinducer synth 87.7 1.7 5.8E-05 46.5 9.5 109 693-865 299-408 (409)
259 1vef_A Acetylornithine/acetyl- 87.4 2.4 8.1E-05 45.0 10.3 99 692-853 296-394 (395)
260 1svv_A Threonine aldolase; str 87.3 1 3.6E-05 46.5 7.3 92 701-854 265-356 (359)
261 3tqx_A 2-amino-3-ketobutyrate 87.1 1.9 6.4E-05 45.4 9.3 106 692-854 288-394 (399)
262 1fg7_A Histidinol phosphate am 87.1 3.1 0.0001 43.9 10.9 89 702-852 265-354 (356)
263 4a0g_A Adenosylmethionine-8-am 87.0 1.7 5.9E-05 52.7 10.0 82 301-388 594-688 (831)
264 1bw0_A TAT, protein (tyrosine 86.8 2.3 7.9E-05 45.4 9.9 102 699-854 308-411 (416)
265 3g0t_A Putative aminotransfera 86.5 2.7 9.2E-05 45.1 10.3 99 702-853 333-434 (437)
266 3kax_A Aminotransferase, class 86.2 2.3 7.8E-05 44.5 9.2 96 702-853 284-382 (383)
267 1cs1_A CGS, protein (cystathio 85.7 7.1 0.00024 41.5 13.0 83 747-853 295-384 (386)
268 4dq6_A Putative pyridoxal phos 85.1 3.5 0.00012 43.2 10.1 96 702-853 292-390 (391)
269 3fkd_A L-threonine-O-3-phospha 85.0 5.4 0.00019 41.4 11.4 86 711-855 255-341 (350)
270 1lc5_A COBD, L-threonine-O-3-p 85.0 3.4 0.00012 43.3 10.0 94 701-854 265-358 (364)
271 2oga_A Transaminase; PLP-depen 84.9 1.4 4.7E-05 47.3 7.0 119 704-854 275-394 (399)
272 3cog_A Cystathionine gamma-lya 84.8 1 3.5E-05 49.1 6.0 94 737-855 301-401 (403)
273 3a2b_A Serine palmitoyltransfe 84.7 2.5 8.5E-05 44.9 8.8 104 692-853 285-389 (398)
274 3dzz_A Putative pyridoxal 5'-p 84.6 4.3 0.00015 42.5 10.5 98 702-854 288-387 (391)
275 2vyc_A Biodegradative arginine 84.3 1.9 6.4E-05 51.7 8.4 118 693-853 434-602 (755)
276 2zc0_A Alanine glyoxylate tran 84.2 3.3 0.00011 43.9 9.5 102 701-854 300-402 (407)
277 2o0r_A RV0858C (N-succinyldiam 83.8 2.8 9.7E-05 44.8 8.8 119 701-864 284-403 (411)
278 1u08_A Hypothetical aminotrans 82.4 4.2 0.00014 42.9 9.3 99 701-852 287-386 (386)
279 3l8a_A METC, putative aminotra 82.1 5 0.00017 43.2 10.0 98 702-854 322-420 (421)
280 2e7j_A SEP-tRNA:Cys-tRNA synth 82.0 1.3 4.6E-05 46.1 5.3 105 692-853 259-367 (371)
281 3bwn_A AT1G70560, L-tryptophan 81.9 3.5 0.00012 44.4 8.7 97 702-854 280-385 (391)
282 2po3_A 4-dehydrase; external a 81.8 7.6 0.00026 41.8 11.3 124 701-854 258-384 (424)
283 2fq6_A Cystathionine beta-lyas 81.5 0.61 2.1E-05 51.5 2.6 85 747-851 326-413 (415)
284 3ez1_A Aminotransferase MOCR f 81.4 8.7 0.0003 41.1 11.5 99 704-854 314-413 (423)
285 1s0a_A Adenosylmethionine-8-am 81.3 6.6 0.00023 42.3 10.6 100 692-854 322-422 (429)
286 3qgu_A LL-diaminopimelate amin 80.9 5 0.00017 43.5 9.4 96 702-854 343-438 (449)
287 3ecd_A Serine hydroxymethyltra 80.5 5.8 0.0002 42.1 9.7 107 700-855 286-396 (425)
288 3e2y_A Kynurenine-oxoglutarate 80.3 5.7 0.0002 42.1 9.5 102 702-852 299-409 (410)
289 2x3l_A ORN/Lys/Arg decarboxyla 80.2 3.2 0.00011 45.9 7.8 94 693-854 257-351 (446)
290 3if2_A Aminotransferase; YP_26 80.0 11 0.00039 40.5 11.9 82 737-854 357-438 (444)
291 3piu_A 1-aminocyclopropane-1-c 79.2 6.4 0.00022 42.5 9.6 100 703-854 328-430 (435)
292 3nra_A Aspartate aminotransfer 78.1 5.2 0.00018 42.3 8.3 96 703-853 306-402 (407)
293 2rfv_A Methionine gamma-lyase; 78.0 0.64 2.2E-05 49.9 1.3 90 737-851 299-395 (398)
294 1bs0_A Protein (8-amino-7-oxon 78.0 4.3 0.00015 42.7 7.6 106 692-852 278-383 (384)
295 2ord_A Acoat, acetylornithine 77.8 5.8 0.0002 42.1 8.6 100 692-853 293-394 (397)
296 3asa_A LL-diaminopimelate amin 77.4 8.5 0.00029 41.0 9.8 97 701-854 293-391 (400)
297 1yiz_A Kynurenine aminotransfe 76.9 9.6 0.00033 40.9 10.1 106 702-855 314-428 (429)
298 1sff_A 4-aminobutyrate aminotr 76.7 5.5 0.00019 42.6 8.0 105 693-853 311-421 (426)
299 2zyj_A Alpha-aminodipate amino 75.9 13 0.00046 39.3 10.8 101 702-854 290-391 (397)
300 3ele_A Amino transferase; RER0 75.7 8 0.00027 40.8 9.0 88 707-854 307-394 (398)
301 3g7q_A Valine-pyruvate aminotr 75.4 17 0.00057 38.5 11.4 81 737-854 331-411 (417)
302 1wyu_B Glycine dehydrogenase s 74.9 6.2 0.00021 43.7 8.2 108 692-855 329-440 (474)
303 1xi9_A Putative transaminase; 74.6 8.5 0.00029 41.0 8.9 98 702-854 302-401 (406)
304 1iay_A ACC synthase 2, 1-amino 74.4 7.1 0.00024 42.0 8.3 101 702-854 322-425 (428)
305 2eh6_A Acoat, acetylornithine 73.7 12 0.0004 39.1 9.5 86 704-853 290-375 (375)
306 1ibj_A CBL, cystathionine beta 72.8 2.3 8E-05 47.6 4.1 88 737-854 366-460 (464)
307 3ppl_A Aspartate aminotransfer 72.6 18 0.0006 38.9 10.9 99 704-854 320-418 (427)
308 2z61_A Probable aspartate amin 72.5 6.8 0.00023 41.0 7.4 95 701-854 274-369 (370)
309 3a8u_X Omega-amino acid--pyruv 72.4 13 0.00046 40.2 9.9 102 693-854 341-445 (449)
310 1j32_A Aspartate aminotransfer 72.0 5.5 0.00019 42.0 6.5 95 702-854 289-385 (388)
311 3cq5_A Histidinol-phosphate am 71.8 18 0.00061 38.0 10.4 88 702-855 280-367 (369)
312 2pb2_A Acetylornithine/succiny 71.2 12 0.00042 40.5 9.2 102 693-854 313-416 (420)
313 1c4k_A Protein (ornithine deca 70.6 15 0.00051 43.9 10.5 108 693-853 408-563 (730)
314 3jtx_A Aminotransferase; NP_28 70.5 24 0.00082 37.0 11.1 100 702-853 296-395 (396)
315 2oat_A Ornithine aminotransfer 70.4 17 0.00059 39.7 10.3 101 693-853 336-436 (439)
316 4adb_A Succinylornithine trans 69.3 9 0.00031 40.5 7.5 98 702-854 301-398 (406)
317 3fvs_A Kynurenine--oxoglutarat 69.2 11 0.00036 40.3 8.1 104 702-853 306-419 (422)
318 1z7d_A Ornithine aminotransfer 69.1 21 0.00074 38.8 10.7 102 692-854 324-427 (433)
319 3h14_A Aminotransferase, class 69.0 13 0.00044 39.2 8.6 98 702-853 281-379 (391)
320 1ohv_A 4-aminobutyrate aminotr 68.8 14 0.00047 41.2 9.1 100 693-854 367-469 (472)
321 3d6k_A Putative aminotransfera 68.8 26 0.00089 37.7 11.1 97 705-854 319-416 (422)
322 3ei9_A LL-diaminopimelate amin 68.5 16 0.00055 39.2 9.3 93 702-851 331-423 (432)
323 1vp4_A Aminotransferase, putat 67.8 22 0.00074 38.3 10.2 104 702-855 313-417 (425)
324 3nx3_A Acoat, acetylornithine 67.0 25 0.00084 37.2 10.3 93 703-854 299-393 (395)
325 2hox_A ALLIIN lyase 1; cystein 66.9 16 0.00054 40.0 9.0 97 705-855 318-424 (427)
326 3i4j_A Aminotransferase, class 65.7 20 0.00068 38.5 9.4 111 693-854 309-426 (430)
327 2cjg_A L-lysine-epsilon aminot 65.3 17 0.0006 39.7 9.0 101 693-854 344-446 (449)
328 2x5d_A Probable aminotransfera 64.9 15 0.00052 39.1 8.3 101 702-855 297-397 (412)
329 2dou_A Probable N-succinyldiam 63.6 44 0.0015 34.9 11.4 94 702-854 282-376 (376)
330 1o4s_A Aspartate aminotransfer 63.3 23 0.00078 37.5 9.2 92 702-854 295-387 (389)
331 2o1b_A Aminotransferase, class 62.9 21 0.00072 38.1 8.9 96 702-854 305-401 (404)
332 2ez2_A Beta-tyrosinase, tyrosi 62.8 43 0.0015 36.1 11.5 112 703-855 312-430 (456)
333 2x5f_A Aspartate_tyrosine_phen 60.7 37 0.0013 36.4 10.4 94 702-854 333-427 (430)
334 3n5m_A Adenosylmethionine-8-am 60.0 35 0.0012 37.0 10.1 103 703-854 341-450 (452)
335 1c7n_A Cystalysin; transferase 59.8 21 0.00073 37.6 8.2 97 702-854 292-391 (399)
336 1jg8_A L-ALLO-threonine aldola 59.6 24 0.00083 36.3 8.4 26 828-853 318-343 (347)
337 3ezs_A Aminotransferase ASPB; 58.9 37 0.0013 35.3 9.7 92 702-854 282-373 (376)
338 3tcm_A Alanine aminotransferas 58.5 20 0.00068 40.1 8.0 100 703-854 383-492 (500)
339 3aow_A Putative uncharacterize 57.8 35 0.0012 37.4 9.7 102 702-855 342-444 (448)
340 3ihj_A Alanine aminotransferas 57.7 34 0.0012 38.2 9.8 100 703-854 382-491 (498)
341 1b5p_A Protein (aspartate amin 57.2 25 0.00085 37.2 8.2 93 702-853 289-382 (385)
342 1gd9_A Aspartate aminotransfer 56.5 19 0.00066 37.8 7.1 98 701-854 286-384 (389)
343 1d2f_A MALY protein; aminotran 56.5 30 0.001 36.4 8.6 96 702-853 288-386 (390)
344 3dxv_A Alpha-amino-epsilon-cap 56.0 32 0.0011 37.0 8.9 99 703-854 319-423 (439)
345 3op7_A Aminotransferase class 55.4 48 0.0016 34.5 9.9 95 702-854 274-369 (375)
346 3gbx_A Serine hydroxymethyltra 54.7 31 0.001 36.4 8.3 106 701-855 286-395 (420)
347 3gju_A Putative aminotransfera 53.2 81 0.0028 34.4 11.7 27 828-854 428-454 (460)
348 3nyt_A Aminotransferase WBPE; 51.2 20 0.0007 37.6 6.3 116 702-852 245-360 (367)
349 3i5t_A Aminotransferase; pyrid 51.2 83 0.0028 34.9 11.5 104 693-855 342-453 (476)
350 3qhx_A Cystathionine gamma-syn 50.2 50 0.0017 35.4 9.3 24 826-849 368-391 (392)
351 1zod_A DGD, 2,2-dialkylglycine 50.2 52 0.0018 35.2 9.4 107 692-853 316-429 (433)
352 2gb3_A Aspartate aminotransfer 50.1 51 0.0017 35.1 9.2 99 701-854 295-400 (409)
353 2r2n_A Kynurenine/alpha-aminoa 49.2 82 0.0028 33.8 10.8 103 702-854 319-422 (425)
354 2oqx_A Tryptophanase; lyase, p 46.4 47 0.0016 35.9 8.3 105 709-854 330-440 (467)
355 3tfu_A Adenosylmethionine-8-am 46.0 1E+02 0.0034 34.0 11.0 92 703-854 359-451 (457)
356 2eo5_A 419AA long hypothetical 45.9 47 0.0016 35.7 8.2 94 692-853 322-415 (419)
357 3acz_A Methionine gamma-lyase; 45.0 76 0.0026 33.8 9.6 29 747-782 302-330 (389)
358 4a6r_A Omega transaminase; tra 44.9 88 0.003 34.1 10.3 27 828-854 421-447 (459)
359 3hmu_A Aminotransferase, class 41.8 1E+02 0.0035 34.1 10.3 96 703-854 345-450 (472)
360 3n0l_A Serine hydroxymethyltra 40.3 66 0.0023 33.8 8.1 106 700-854 278-387 (417)
361 3dod_A Adenosylmethionine-8-am 39.7 1.3E+02 0.0046 32.5 10.7 103 693-854 331-441 (448)
362 1uu1_A Histidinol-phosphate am 37.7 55 0.0019 33.7 6.9 84 702-852 251-334 (335)
363 3ri6_A O-acetylhomoserine sulf 37.4 1.2E+02 0.004 33.6 9.8 24 826-853 406-429 (430)
364 3ju7_A Putative PLP-dependent 36.9 25 0.00084 37.8 4.2 120 702-854 250-373 (377)
365 3oks_A 4-aminobutyrate transam 35.4 1.6E+02 0.0053 32.2 10.4 99 703-854 346-449 (451)
366 4ffc_A 4-aminobutyrate aminotr 35.1 1.5E+02 0.0052 32.3 10.3 99 703-854 344-447 (453)
367 1e5e_A MGL, methionine gamma-l 34.0 1.9E+02 0.0065 31.0 10.7 24 827-854 370-393 (404)
368 1yaa_A Aspartate aminotransfer 32.7 25 0.00084 37.4 3.3 88 701-854 322-409 (412)
369 2ay1_A Aroat, aromatic amino a 29.7 34 0.0011 36.0 3.7 85 701-851 307-391 (394)
370 3h7f_A Serine hydroxymethyltra 28.7 1.1E+02 0.0039 33.2 7.8 110 701-854 299-412 (447)
371 3b46_A Aminotransferase BNA3; 28.2 1.2E+02 0.0042 32.7 8.0 104 702-853 329-444 (447)
372 3fsl_A Aromatic-amino-acid ami 27.9 57 0.0019 34.1 5.1 85 702-852 312-396 (397)
373 7aat_A Aspartate aminotransfer 24.8 77 0.0026 33.3 5.4 85 702-852 315-399 (401)
374 2q7w_A Aspartate aminotransfer 24.7 43 0.0015 35.1 3.4 85 702-852 311-395 (396)
375 3l44_A Glutamate-1-semialdehyd 21.9 77 0.0026 34.0 4.8 95 703-854 323-428 (434)
376 1ax4_A Tryptophanase; tryptoph 21.6 3.8E+02 0.013 28.6 10.3 28 827-854 411-439 (467)
377 3f6t_A Aspartate aminotransfer 20.9 1.3E+02 0.0045 33.9 6.6 52 766-854 472-523 (533)
378 2a7v_A Serine hydroxymethyltra 20.7 4E+02 0.014 30.1 10.5 104 701-854 332-439 (490)
No 1
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=100.00 E-value=8.4e-35 Score=321.15 Aligned_cols=202 Identities=14% Similarity=0.087 Sum_probs=154.1
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc-----------hHHHHHHHHHHHHHhcCCCCCCCc
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE-----------KGTVEHDIKTRIMDHLNIPENEYG 218 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps-----------S~~~ieeARerIA~lLgA~~dEY~ 218 (872)
.+|||++|++++|+.|++++.+. + .. .++||. ..+.++++|+.||++||++ ++++
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~--~--~~---------~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~-~~~e 92 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQE--L--CD---------WHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIP-SNYK 92 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC------------------------------------CCHHHHHHHHHHHTCC-TTEE
T ss_pred cCccccCCCCCCCHHHHHHHHHH--H--Hh---------ccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCce
Confidence 58999999999999999987541 1 11 123332 2467899999999999995 3457
Q ss_pred EEE-eCCHHHHHHHHHhhCCCCCCCeEE-EecccCchhHHHHHHHHHHcCcEEEEEecc-CCCCc-cCHHHHHHHHhhhh
Q 002866 219 LVF-TVSRGSAFKLLAESYPFHTNKKLL-TMFDYESQSVNWMAQSAKEKGAKVYSAWFK-WPTLK-LCSTDLRKQISSKK 294 (872)
Q Consensus 219 VVF-TsnATeALnLVaeslpf~~Gd~IL-T~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd-~p~g~-Id~edLe~~I~~~~ 294 (872)
|+| |+|+|+|+|+++.++ +++|++++ +... |-+- .|...+++.| +|.+++++ ...+. +++++++.+|
T Consensus 93 vif~t~~~T~a~n~ai~~l-~~~gd~v~~~~~~--~~~~-~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l---- 163 (386)
T 3qm2_A 93 VLFCHGGGRGQFAGVPLNL-LGDKTTADYVDAG--YWAA-SAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQL---- 163 (386)
T ss_dssp EEEEESCTTHHHHHHHHHH-CTTCCEEEEEESS--HHHH-HHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCC----
T ss_pred EEEEcCCchHHHHHHHHhc-cCCCCeEEEEeCC--HHHH-HHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhc----
Confidence 999 699999999999998 57888864 3322 2222 4666788889 99999997 11243 5666664433
Q ss_pred ccCCCCCceEEEEeCccCcccch-hcHHHHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCce
Q 002866 295 RRKKDSAAGLFVFPVQSRVTGAK-YSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGF 373 (872)
Q Consensus 295 rr~~~~~T~LVa~p~vSNvTG~i-~PLe~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGv 373 (872)
+++|+||+++|.+|.||++ +|++.|. +|++++|||+|++|+ +|+|+++++ ++++|+|||+| |.|+
T Consensus 164 ----~~~t~lV~~~h~et~tG~~i~pi~~i~----~g~~~~vDa~qs~g~--~pidv~~~~--~~~~s~hK~lG--P~G~ 229 (386)
T 3qm2_A 164 ----SDNAAYLHYCPNETIDGIAIDETPDFG----PEVVVTADFSSTILS--APLDVSRYG--VIYAGAQKNIG--PAGL 229 (386)
T ss_dssp ----CTTCSCEEECSEETTTTEECCCCCCCC----TTCCEEEECTTTTTS--SCCCGGGCS--EEEEETTTTTC--CTTE
T ss_pred ----CCCCcEEEEECCcCCcCEecCchhhhc----CCCEEEEEcccccCC--CCCCccccC--EEEEecccccC--CCcc
Confidence 3469999999999999996 9997654 799999999999998 799999885 57799999997 8999
Q ss_pred EEEEEeCCCcccccC
Q 002866 374 GCLLIKKSVMGSLQN 388 (872)
Q Consensus 374 G~LyVRk~~i~~L~P 388 (872)
|+||+|++.++.++|
T Consensus 230 g~l~v~~~~~~~~~~ 244 (386)
T 3qm2_A 230 TLVIVREDLLGKAHE 244 (386)
T ss_dssp EEEEEEGGGCSCCCT
T ss_pred EEEEECHHHHhhhcc
Confidence 999999998766654
No 2
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=314.49 Aligned_cols=204 Identities=12% Similarity=0.098 Sum_probs=157.8
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc-----------hHHHHHHHHHHHHHhcCCCCCCCc
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE-----------KGTVEHDIKTRIMDHLNIPENEYG 218 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps-----------S~~~ieeARerIA~lLgA~~dEY~ 218 (872)
.--||.|+++|+|+.|++++.+. +. ..++|+. ..+.++++|++|+++||+++ +|+
T Consensus 13 ~~~~n~at~~~~p~~Vl~a~~~~-----------~~--~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~-~~e 78 (377)
T 3e77_A 13 LGTENLYFQSMLPHSVLLEIQKE-----------LL--DYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPD-NYK 78 (377)
T ss_dssp --CCCEECSCCCCHHHHHHHHHT-----------SS--SGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCT-TEE
T ss_pred cccccccccCCCCHHHHHHHHHH-----------HH--hcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-CCe
Confidence 34799999999999999986541 11 1233332 34789999999999999964 467
Q ss_pred EEE-eCCHHHHHHHHHhhCCC-CCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhcc
Q 002866 219 LVF-TVSRGSAFKLLAESYPF-HTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRR 296 (872)
Q Consensus 219 VVF-TsnATeALnLVaeslpf-~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr 296 (872)
|+| |+|+|+|+|+++.++.. ++||++++.. .+|-+ ..|.+.+++.|+.+.++++++. ..+++++++..
T Consensus 79 vif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~-~g~~~-~~~~~~a~~~G~~~~~~~~~~~-~~~~~~~~~~~------- 148 (377)
T 3e77_A 79 VIFLQGGGCGQFSAVPLNLIGLKAGRCADYVV-TGAWS-AKAAEEAKKFGTINIVHPKLGS-YTKIPDPSTWN------- 148 (377)
T ss_dssp EEEESSHHHHHHHHHHHHHGGGSTTCEEEECC-CSHHH-HHHHHHHTTTSEEEECSCCCSS-SCSCCCGGGCC-------
T ss_pred EEEEcCchHHHHHHHHHhccCCCCCCeEEEEE-CCHHH-HHHHHHHHHhCCceEEeccCCC-cCCCCChHHhc-------
Confidence 999 58999999999999753 3588875432 12333 3567788889999988888764 33455544322
Q ss_pred CCCCCceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 002866 297 KKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCL 376 (872)
Q Consensus 297 ~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~L 376 (872)
.+++|+||+++|.+|.||+++|+ .++++|++++|||+|++|+ +|+|+++++ ++++|+|||+| |.|+|+|
T Consensus 149 -i~~~t~lV~~~h~et~tG~~~pi----i~~~~~~~~~vD~~q~~g~--~~id~~~~~--~~~~s~~K~~g--p~G~g~l 217 (377)
T 3e77_A 149 -LNPDASYVYYCANETVHGVEFDF----IPDVKGAVLVCDMSSNFLS--KPVDVSKFG--VIFAGAQKNVG--SAGVTVV 217 (377)
T ss_dssp -CCTTCSCEEEESEETTTTEECSS----CCCCTTCCEEEECTTTTTS--SCCCGGGCS--EEEEEGGGTTS--CTTCEEE
T ss_pred -cCCCccEEEEeCccCchheEchh----hhccCCCEEEEEcccccCC--CCCchhhcC--EEEEecccccC--CCccEEE
Confidence 23579999999999999999999 3678999999999999998 799999876 58999999997 8999999
Q ss_pred EEeCCCcccccC
Q 002866 377 LIKKSVMGSLQN 388 (872)
Q Consensus 377 yVRk~~i~~L~P 388 (872)
|+|++.++.++|
T Consensus 218 ~~~~~~l~~~~~ 229 (377)
T 3e77_A 218 IVRDDLLGFALR 229 (377)
T ss_dssp EEETTSCSCCCT
T ss_pred EEcHHHHhhccC
Confidence 999998765543
No 3
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=6.9e-32 Score=295.53 Aligned_cols=197 Identities=13% Similarity=0.111 Sum_probs=153.7
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc-----------hHHHHHHHHHHHHHhcCCCCCCCc
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE-----------KGTVEHDIKTRIMDHLNIPENEYG 218 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps-----------S~~~ieeARerIA~lLgA~~dEY~ 218 (872)
.+|+=++|++++|+.|++++.+. +. ..++||. ..+.++++|+.|+++||+++ +++
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~-----------~~--~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~-~~~ 70 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKE-----------LC--DYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELND-DYE 70 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHT-----------SS--SGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCT-TEE
T ss_pred ceEeecCCCCCCcHHHHHHHHHH-----------HH--hcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCC-Cce
Confidence 57888899999999999986431 11 1223332 34789999999999999964 357
Q ss_pred EEE-eCCHHHHHHHHHhhCCCCCCCeE--EEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCc-cCHHHHHHHHhhhh
Q 002866 219 LVF-TVSRGSAFKLLAESYPFHTNKKL--LTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLK-LCSTDLRKQISSKK 294 (872)
Q Consensus 219 VVF-TsnATeALnLVaeslpf~~Gd~I--LT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~-Id~edLe~~I~~~~ 294 (872)
|+| |+|+|+|+|+++.++. +|+++ ++...++| .|.+.+++.|++|+++++++.... +++++ + |.
T Consensus 71 v~f~t~~~T~a~n~~~~~~~--~~~~~~~i~~~~~~~----~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~--- 138 (361)
T 3m5u_A 71 VLFLQGGASLQFAMIPMNLA--LNGVCEYANTGVWTK----KAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FS--- 138 (361)
T ss_dssp EEEESSHHHHHHHHHHHHHC--CSSCEEEEECSHHHH----HHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CC---
T ss_pred EEEEcCcHHHHHHHHHHhcC--CCCeEEEEeCCHHHH----HHHHHHHHcCCceEEEecccCcCCCcCChh--h-cC---
Confidence 999 9999999999999975 56753 33334444 455667888999999999985321 34444 2 43
Q ss_pred ccCCCCCceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceE
Q 002866 295 RRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFG 374 (872)
Q Consensus 295 rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG 374 (872)
++|+||+++|.+|.||+++|. | ++ +|++++|||+|++|+ +|+|+++ +||+++|+|||+| |.|+|
T Consensus 139 -----~~t~lv~~~~~e~~tG~~~~~--i--~~-~~~~~~vD~~q~~g~--~~id~~~--~d~~~~s~~K~~g--p~G~g 202 (361)
T 3m5u_A 139 -----DNADYAYICSNNTIYGTQYQN--Y--PK-TKTPLIVDASSDFFS--RKVDFSN--IALFYGGVQKNAG--ISGLS 202 (361)
T ss_dssp -----TTSSEEEEESEETTTTEECSS--C--CC-CSSCEEEECGGGTTS--SCCCCTT--EEEEEEETTTTSS--CTTCE
T ss_pred -----CCCCEEEEeCCCCCcceeCCc--c--cc-cCCEEEEEcccccCC--CCCCccc--CCEEEEechhccC--CCccE
Confidence 368999999999999999883 2 23 499999999999998 7999985 7999999999997 89999
Q ss_pred EEEEeCCCcccccC
Q 002866 375 CLLIKKSVMGSLQN 388 (872)
Q Consensus 375 ~LyVRk~~i~~L~P 388 (872)
+||+|++.++.++|
T Consensus 203 ~l~~~~~~~~~~~~ 216 (361)
T 3m5u_A 203 CIFIRKDMLERSKN 216 (361)
T ss_dssp EEEEEHHHHHHHHT
T ss_pred EEEEcHHHHhhhcC
Confidence 99999998877765
No 4
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.97 E-value=8e-29 Score=263.49 Aligned_cols=225 Identities=19% Similarity=0.210 Sum_probs=181.9
Q ss_pred hHHHHHhhcccCCCC------ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc---------hHHHH
Q 002866 135 KIDQLRANEYLHLSP------KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE---------KGTVE 199 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~------~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps---------S~~~i 199 (872)
++..+|+ +||.++. ++|||+++.++.|+.+++++.+ .... .++|++ ....+
T Consensus 4 ~~~~~r~-~f~~~~~~~~g~~~i~l~~~~~~~~~~~v~~a~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~~ 69 (406)
T 1kmj_A 4 SVDKVRA-DFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAE--------FYRH-----GYAAVHRGIHTLSAQATEKM 69 (406)
T ss_dssp CHHHHHH-TCGGGGCEETTEECEECCTTTCCCCCHHHHHHHHH--------HHHH-----TCCCCSSCSSHHHHHHHHHH
T ss_pred CHHHHHH-hCcccccccCCCceEEecCCccCCCCHHHHHHHHH--------HHHh-----hcCCCCCCcchHHHHHHHHH
Confidence 4778896 6999864 8999999999999998887532 1111 122322 23567
Q ss_pred HHHHHHHHHhcCC-CCCCCcEEEeCCHHHHHHHHHhhCC---CCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEec
Q 002866 200 HDIKTRIMDHLNI-PENEYGLVFTVSRGSAFKLLAESYP---FHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 200 eeARerIA~lLgA-~~dEY~VVFTsnATeALnLVaeslp---f~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpv 274 (872)
.++|++||+++|+ +++ .|+||+|+|+|+++++.++. +++|++|++... .|.++ ..+...++..|+++..+|+
T Consensus 70 ~~l~~~la~~~~~~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~ 146 (406)
T 1kmj_A 70 ENVRKRASLFINARSAE--ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQM-EHHANIVPWQMLCARVGAELRVIPL 146 (406)
T ss_dssp HHHHHHHHHHTTCSCGG--GEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETT-CCGGGTHHHHHHHHHHTCEEEEECB
T ss_pred HHHHHHHHHHcCCCCCC--eEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecc-cchHHHHHHHHHHHhCCCEEEEEec
Confidence 8999999999999 444 69999999999999999984 688999887643 34444 4566667778999999998
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCC
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLF 353 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l 353 (872)
+. ++.++.++|+++|.. ++++|++++.+|.||.++|++ +++.|+++|+++++|+++..|. .++++...
T Consensus 147 ~~-~~~~d~~~l~~~l~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~--~~~~~~~~ 215 (406)
T 1kmj_A 147 NP-DGTLQLETLPTLFDE--------KTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMH--HPVDVQAL 215 (406)
T ss_dssp CT-TSCBCGGGHHHHCCT--------TEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTT--SCCCHHHH
T ss_pred CC-CCCcCHHHHHHHhcc--------CCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCC--CCCccccc
Confidence 75 577899999888752 589999999999999999997 4577899999999999999886 57777777
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 354 RPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 354 ~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
++|++++|+||+|| |.|+|+++++++.++.+.+.
T Consensus 216 ~~d~~~~s~~K~~g--~~G~G~~~~~~~~~~~~~~~ 249 (406)
T 1kmj_A 216 DCDFYVFSGHKLYG--PTGIGILYVKEALLQEMPPW 249 (406)
T ss_dssp TCSEEEEEGGGTTS--CTTCEEEEECHHHHHHCCCS
T ss_pred CCCEEEEEchhccC--CCCcEEEEEeHHHHhhcCCc
Confidence 89999999999997 77999999998888777654
No 5
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.97 E-value=1.1e-29 Score=280.71 Aligned_cols=237 Identities=15% Similarity=0.088 Sum_probs=178.5
Q ss_pred hHHHHHhhcccCCC----------------CceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCc-CCCchHH
Q 002866 135 KIDQLRANEYLHLS----------------PKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALY-GGAEKGT 197 (872)
Q Consensus 135 ~ID~lR~~EFP~L~----------------~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~y-gNpsS~~ 197 (872)
.+..+|+ +|+... +.+|||+++.++.|+.+.+++.+. +..+...... ..+ +.+....
T Consensus 38 ~l~~~r~-~f~~~~~~~~~~~~~~~~~~~~~~iyld~~~~g~~p~~v~~~i~~~----l~~~~~~~~~-~~~~~~~~~~~ 111 (465)
T 3e9k_A 38 KLRHFRE-CFYIPKIQDLPPVDLSLVNKDENAIYFLGNSLGLQPKMVKTYLEEE----LDKWAKIAAY-GHEVGKRPWIT 111 (465)
T ss_dssp TTGGGGG-GEECCBGGGSTTCCGGGSCTTCBCEECBTTTSCCEETTHHHHHHHH----HHHHHHHGGG-GGTSSSSCGGG
T ss_pred cHHHHHH-hcCCCCcccccccccccccCCCCeEEecCCccCCChHHHHHHHHHH----HHHHHhhCCc-ccccCCccHHH
Confidence 3556775 687764 479999999999998886664331 1122211110 111 1122234
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC--CCCCCCeEEEecccCchhHH-HHHHHHHHcCcEE-----
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY--PFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKV----- 269 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl--pf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV----- 269 (872)
..+++|+++|+++|++++ .|+||+|+|+++++++.++ |..++++||+.. ..|.+.. .+...++..|+++
T Consensus 112 ~~~~l~~~la~~~g~~~~--~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~-~~~~s~~~~~~~~~~~~G~~~~~~~v 188 (465)
T 3e9k_A 112 GDESIVGLMKDIVGANEK--EIALMNALTVNLHLLMLSFFKPTPKRYKILLEA-KAFPSDHYAIESQLQLHGLNIEESMR 188 (465)
T ss_dssp TTHHHHGGGHHHHTCCGG--GEEECSCHHHHHHHHHHHHCCCCSSSCEEEEET-TCCHHHHHHHHHHHHHTTCCHHHHEE
T ss_pred hHHHHHHHHHHHcCCCcC--CEEEECCHHHHHHHHHHHhccccCCCCEEEEcC-CcCCchHHHHHHHHHHcCCcceeeeE
Confidence 556789999999999876 4999999999999999987 445566687764 3455554 3555677789874
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccC
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSL 348 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipL 348 (872)
..+|.+. ++.++.++|+++|... ++++++|++++++|.||+++|++. .+.|+++|++|++|++|++|. +++
T Consensus 189 ~~~~~~~-~~~~d~~~l~~~i~~~-----~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~--~~~ 260 (465)
T 3e9k_A 189 MIKPREG-EETLRIEDILEVIEKE-----GDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGN--VEL 260 (465)
T ss_dssp EECCCTT-CSSCCHHHHHHHHHHH-----GGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTT--SCC
T ss_pred EEecCCC-CCccCHHHHHHHHHhc-----CCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCC--cCC
Confidence 4445543 5778999999999742 125899999999999999999984 567899999999999999997 789
Q ss_pred CCCCCCCcEEEEcccccC-CCCCCceEEEEEeCCCcccccCC
Q 002866 349 GLSLFRPDFIITSFYRVF-GFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~f-G~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
++..+++||+++|+||++ |+ |.|+|++|++++.++.+.+.
T Consensus 261 ~~~~~~~D~~~~s~~K~l~~g-p~~~g~l~~~~~~~~~~~~~ 301 (465)
T 3e9k_A 261 YLHDWGVDFACWCSYKYLNAG-AGGIAGAFIHEKHAHTIKPA 301 (465)
T ss_dssp CHHHHTCCEEEECSSSTTCCC-TTCCCEEEECGGGTTTSCCS
T ss_pred chhhcCCCEEEECcccccccC-CCceEEEEEcHHHHhhcCCc
Confidence 998899999999999998 45 88999999999988777654
No 6
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.2e-28 Score=264.30 Aligned_cols=224 Identities=18% Similarity=0.129 Sum_probs=179.5
Q ss_pred hHHHHHhhcccCCCC-ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc--------hHHHHHHHHHH
Q 002866 135 KIDQLRANEYLHLSP-KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE--------KGTVEHDIKTR 205 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~-~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps--------S~~~ieeARer 205 (872)
+++.+|+ +||.+++ ++|||+++.++.|+.+++++.+ .+. . .++||+ ....++++|+.
T Consensus 12 ~~~~~r~-~fp~~~~~~~~ld~~~~~~~~~~v~~a~~~-------~~~-~-----~~~~~~~~~~~~~~~~~~~~~l~~~ 77 (406)
T 3cai_A 12 DVARVRG-LHPSLGDGWVHFDAPAGMLIPDSVATTVST-------AFR-R-----SGASTVGAHPSARRSAAVLDAAREA 77 (406)
T ss_dssp CHHHHHH-TCTTTTSSCEECBGGGCCCCCHHHHHHHHH-------HHH-H-----CCSSSCSSSHHHHHHHHHHHHHHHH
T ss_pred cHHHHHH-hhhhcCCCeEEEeCCCcCCCCHHHHHHHHH-------HHH-h-----cCCCCCCccHHHHHHHHHHHHHHHH
Confidence 6888996 6999986 9999999999999999887543 121 1 122221 23578899999
Q ss_pred HHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC--CCCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccCCCCccC
Q 002866 206 IMDHLNIPENEYGLVFTVSRGSAFKLLAESY--PFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKWPTLKLC 282 (872)
Q Consensus 206 IA~lLgA~~dEY~VVFTsnATeALnLVaesl--pf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~p~g~Id 282 (872)
+++++|++++ .|+||+|+|+|+.+++.++ .+++|++|++.. .+|.++ ..+...+++.|++++.++++..++.++
T Consensus 78 la~~~g~~~~--~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~-~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d 154 (406)
T 3cai_A 78 VADLVNADPG--GVVLGADRAVLLSLLAEASSSRAGLGYEVIVSR-LDDEANIAPWLRAAHRYGAKVKWAEVDIETGELP 154 (406)
T ss_dssp HHHHHTCCGG--GEEEESCHHHHHHHHHHHTGGGGBTTCEEEEET-TSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCC
T ss_pred HHHHhCCCCC--eEEEeCChHHHHHHHHHHHhhccCCCCEEEEcC-CccHHHHHHHHHHHHhcCCeEEEEecCcccCCcC
Confidence 9999999765 5999999999999999887 467899988764 345554 445555666799999999874467889
Q ss_pred HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEc
Q 002866 283 STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITS 361 (872)
Q Consensus 283 ~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S 361 (872)
.++|+++|.. ++++|++++.+|.||.++|++. ++.|+++|+++++|++|..|. .++++..+++|++++|
T Consensus 155 ~~~l~~~l~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~--~~~~~~~~~~d~~~~s 224 (406)
T 3cai_A 155 TWQWESLISK--------STRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPY--RLLDIRETDADVVTVN 224 (406)
T ss_dssp GGGHHHHCCT--------TEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTT--CCCCHHHHCCSEEEEE
T ss_pred HHHHHHHhCC--------CceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCC--CCCCchhcCCCEEEee
Confidence 9999888742 5899999999999999999974 567899999999999999886 5778777889999999
Q ss_pred ccccCCCCCCceE-EEEEeCCCcccccC
Q 002866 362 FYRVFGFDPTGFG-CLLIKKSVMGSLQN 388 (872)
Q Consensus 362 ~HK~fG~~PtGvG-~LyVRk~~i~~L~P 388 (872)
+||+|| |. +| +++++++.++.+++
T Consensus 225 ~~K~~g--~~-~G~~~~~~~~~~~~l~~ 249 (406)
T 3cai_A 225 AHAWGG--PP-IGAMVFRDPSVMNSFGS 249 (406)
T ss_dssp GGGGTS--CS-CEEEEESCHHHHHTSCC
T ss_pred hhhhcC--CC-cCeEEEEehHHHhhcCC
Confidence 999988 64 88 99988876655543
No 7
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.96 E-value=2e-27 Score=249.62 Aligned_cols=203 Identities=15% Similarity=0.144 Sum_probs=167.1
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch--------HHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK--------GTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS--------~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+|||||+++++.|+.+++++.+ .... .++||+. ...++++|+.+++++|++++ .|+|
T Consensus 1 ~iyld~~~~~~~~~~v~~a~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--~i~~ 65 (382)
T 4hvk_A 1 MAYFDYTSAKPVDERILEAMLP--------YMTE-----SFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG--TVVF 65 (382)
T ss_dssp -CBCBTTTCCCCCHHHHHHHHH--------HHHT-----SCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTE--EEEE
T ss_pred CEeecCCCcCCCCHHHHHHHHH--------HHHh-----hcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcC--eEEE
Confidence 5899999999999999887543 1111 3444432 35778999999999999865 5999
Q ss_pred eCCHHHHHHHHHhhCCC---CCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCC
Q 002866 222 TVSRGSAFKLLAESYPF---HTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 222 TsnATeALnLVaeslpf---~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~ 298 (872)
|+|+|+|+.+++.++.+ ++|++|++. +.+|.+.......+++.|+++..+|++. ++.++.++|+++|..
T Consensus 66 ~~g~~~a~~~~~~~~~~~~~~~gd~vi~~-~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~------ 137 (382)
T 4hvk_A 66 TSGATEANNLAIIGYAMRNARKGKHILVS-AVEHMSVINPAKFLQKQGFEVEYIPVGK-YGEVDVSFIDQKLRD------ 137 (382)
T ss_dssp ESSHHHHHHHHHHHHHHHHGGGCCEEEEE-TTCCHHHHHHHHHHHHTTCEEEEECBCT-TSCBCHHHHHHHCCT------
T ss_pred ECCchHHHHHHHHHhhhhhcCCCCEEEEC-CCCcHHHHHHHHHHHhcCCEEEEeccCC-CCCcCHHHHHHHhcc------
Confidence 99999999999988754 789998876 3456777665556677899999999985 578999999988753
Q ss_pred CCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEE
Q 002866 299 DSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLL 377 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~Ly 377 (872)
++++|++++.+|.||.+.|++ +++.|+++|+ +++|++|+.|. .++++...++|++++|+||++| |.|+|+++
T Consensus 138 --~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~g--~~g~g~~~ 210 (382)
T 4hvk_A 138 --DTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQ--IEVDVEKIGADMLTISSNDIYG--PKGVGALW 210 (382)
T ss_dssp --TEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTT--BCCCHHHHTCSEEEEESGGGTS--CTTCEEEE
T ss_pred --CceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCC--CCCCchhcCCCEEEEeHHHhcC--CCceEEEE
Confidence 589999999999999999998 4567899999 99999999886 5788877889999999999987 77999999
Q ss_pred EeCCC
Q 002866 378 IKKSV 382 (872)
Q Consensus 378 VRk~~ 382 (872)
++++.
T Consensus 211 ~~~~~ 215 (382)
T 4hvk_A 211 IRKEA 215 (382)
T ss_dssp EETTC
T ss_pred EcCcc
Confidence 98864
No 8
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.96 E-value=1.4e-26 Score=247.80 Aligned_cols=225 Identities=18% Similarity=0.189 Sum_probs=179.2
Q ss_pred hHHHHHhhcccCCCC------ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc---------hHHHH
Q 002866 135 KIDQLRANEYLHLSP------KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE---------KGTVE 199 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~------~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps---------S~~~i 199 (872)
.+..+|+ +||.++. ++|||++..++.|+.+++++.+ .+ .. ..+|++ ....+
T Consensus 9 ~~~~~r~-~f~~~~~~~~g~~~i~l~~~~~~~~~~~v~~a~~~-------~~-~~-----~~~~~~~~~~~y~~~~~~~~ 74 (420)
T 1t3i_A 9 LAATVRQ-DFPILNQEINGHPLVYLDNAATSQKPRAVLEKLMH-------YY-EN-----DNANVHRGAHQLSVRATDAY 74 (420)
T ss_dssp HHHHHGG-GCGGGSCEETTEECEECBTTTCCCCCHHHHHHHHH-------HH-HH-----TCCCC--CCSHHHHHHHHHH
T ss_pred HHHHHHH-hCCccccccCCCceEEecCCccCCCCHHHHHHHHH-------HH-Hh-----ccCCCCcccchHHHHHHHHH
Confidence 4567775 7999977 8999999999999998887533 12 11 112222 12567
Q ss_pred HHHHHHHHHhcCC-CCCCCcEEEeCCHHHHHHHHHhhCC---CCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEec
Q 002866 200 HDIKTRIMDHLNI-PENEYGLVFTVSRGSAFKLLAESYP---FHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 200 eeARerIA~lLgA-~~dEY~VVFTsnATeALnLVaeslp---f~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpv 274 (872)
.++|+.||+++|+ +++ .|+||+|+|+|+.+++.++. +++|++|++... .|.++ ..+...++..|++++.+|+
T Consensus 75 ~~l~~~la~~~~~~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~-~~~~~~~~~~~~~~~~g~~~~~v~~ 151 (420)
T 1t3i_A 75 EAVRNKVAKFINARSPR--EIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVM-EHHSNLVPWQMVAAKTGAVLKFVQL 151 (420)
T ss_dssp HHHHHHHHHHTTCSCGG--GEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETT-CCGGGTHHHHHHHHHHCCEEEEECB
T ss_pred HHHHHHHHHHcCCCCCC--eEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcc-hhHHHHHHHHHHHHhcCcEEEEecc
Confidence 8999999999999 554 59999999999999999983 678999887643 34443 3455667778999999999
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCC
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLF 353 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l 353 (872)
+. ++.++.++|+++|.. ++++|.+++.+|.||.++|++. ++.|+++|+++++|+++..|. .++++..+
T Consensus 152 ~~-~~~~d~~~l~~~l~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~ 220 (420)
T 1t3i_A 152 DE-QESFDLEHFKTLLSE--------KTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPH--YPLDVQLI 220 (420)
T ss_dssp CT-TSSBCHHHHHHHCCT--------TEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTT--SCCCHHHH
T ss_pred CC-CCCcCHHHHHHhhCC--------CceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCC--ccCchhhc
Confidence 74 577899999888752 5899999999999999999974 567899999999999999886 46777778
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCCCcccccCC
Q 002866 354 RPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 354 ~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
++|++++|+||++| |.|+|+++++++.++.+.+.
T Consensus 221 ~~di~~~s~sK~~~--~~g~G~~~~~~~~~~~~~~~ 254 (420)
T 1t3i_A 221 DCDWLVASGHKMCA--PTGIGFLYGKEEILEAMPPF 254 (420)
T ss_dssp TCSEEEEEGGGTTS--CTTCEEEEECHHHHHHSCCC
T ss_pred CCCEEEEehhhhcC--CCceEEEEEchHHHhhcCce
Confidence 89999999999887 77899999998887777653
No 9
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.96 E-value=1e-26 Score=246.55 Aligned_cols=232 Identities=14% Similarity=0.149 Sum_probs=176.3
Q ss_pred hHHHHHhhcccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCc---CCCchHHHHHHHHHHHHHhcC
Q 002866 135 KIDQLRANEYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALY---GGAEKGTVEHDIKTRIMDHLN 211 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~y---gNpsS~~~ieeARerIA~lLg 211 (872)
.++.+|+ +||.+++.+|||+++.++.|+.+++++.+ .+... .....+ .-+.......++|++|++++|
T Consensus 3 ~~~~~r~-~f~~~~~~i~l~~~~~~~~~~~v~~a~~~-------~~~~~-~~~~~~~~~~y~~~~~~~~~l~~~la~~~g 73 (390)
T 1elu_A 3 MITPSLH-QFPGLANKTYFNFGGQGILPTVALEAITA-------MYGYL-QENGPFSIAANQHIQQLIAQLRQALAETFN 73 (390)
T ss_dssp --------CCGGGTTSEECCTTTCCCCCHHHHHHHHH-------HHHHH-HHHCSSSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHH-hcCCCCCeEEecCCccCCCCHHHHHHHHH-------HHHHH-hccCCcchhhHHHHHHHHHHHHHHHHHHcC
Confidence 4677885 79999889999999999999888887543 11111 000000 001112567899999999999
Q ss_pred CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccC-CCCccCHHHHHHH
Q 002866 212 IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKW-PTLKLCSTDLRKQ 289 (872)
Q Consensus 212 A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~-p~g~Id~edLe~~ 289 (872)
++++ .|+||+|+|+|+.+++.++.+++|++|++... .|.+.. .+...++..|++++.+|++. .+..++.++|+++
T Consensus 74 ~~~~--~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~-~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 150 (390)
T 1elu_A 74 VDPN--TITITDNVTTGCDIVLWGLDWHQGDEILLTDC-EHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANH 150 (390)
T ss_dssp SCGG--GEEEESSHHHHHHHHHHHSCCCTTCEEEEETT-CCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTT
T ss_pred CCHH--HEEEeCChHHHHHHHHhCCCCCCCCEEEEecC-cccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHh
Confidence 9775 59999999999999999987789999887643 445543 35555677899999999862 2456788888766
Q ss_pred HhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHH----HCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccc
Q 002866 290 ISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQ----QNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYR 364 (872)
Q Consensus 290 I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Ar----e~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK 364 (872)
|. +++++|.+++.+|.||.++|++. .+.|+ ++|+++++|+++..|. .++++...++|++++|+||
T Consensus 151 i~--------~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~--~~~~~~~~~~d~~~~s~~K 220 (390)
T 1elu_A 151 LG--------PKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGS--LPLDFSRLEVDYYAFTGHK 220 (390)
T ss_dssp CC--------TTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTT--BCCCTTTSCCSEEEEESSS
T ss_pred cC--------CCceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCC--cCCChhhcCCCEEEccccc
Confidence 64 25899999999999999999975 56788 9999999999999886 5788888899999999999
Q ss_pred cCCCCCCceEEEEEeCCCcccccCC
Q 002866 365 VFGFDPTGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 365 ~fG~~PtGvG~LyVRk~~i~~L~P~ 389 (872)
|+++ |.|+|+++++++.++.+.+.
T Consensus 221 ~~~~-~~g~G~~~~~~~~~~~~~~~ 244 (390)
T 1elu_A 221 WFAG-PAGVGGLYIHGDCLGEINPT 244 (390)
T ss_dssp TTCC-CTTCEEEEECTTTGGGCCCC
T ss_pred cccC-CCceEEEEECHHhHhhcCCc
Confidence 6555 78999999999988888764
No 10
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.95 E-value=2.2e-26 Score=245.16 Aligned_cols=217 Identities=9% Similarity=0.011 Sum_probs=177.0
Q ss_pred cccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 143 EYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 143 EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+||.+...+|||+++.++.|+.+++++.+ .+.. +..+.....+.++|+.+|+++|++++ .|+||
T Consensus 2 ~fp~~~~~~yl~~~~~~~~~~~v~~a~~~-----------~~~~---~~~~~~~~~~~~l~~~la~~~g~~~~--~v~~t 65 (392)
T 2z9v_A 2 RYPEHADPVITLTAGPVNAYPEVLRGLGR-----------TVLY---DYDPAFQLLYEKVVDKAQKAMRLSNK--PVILH 65 (392)
T ss_dssp CCCTTSCCSEECSSSCCCCCHHHHHHTTS-----------CCCC---TTSHHHHHHHHHHHHHHHHHTTCSSC--CEEES
T ss_pred CcccCCCcceeecCCCcCCCHHHHHHHhc-----------cccc---cccHHHHHHHHHHHHHHHHHhCCCCC--EEEEe
Confidence 59999999999999999999999987543 1111 11123346788999999999999765 59999
Q ss_pred CCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCc
Q 002866 223 VSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 223 snATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
+|+|+|+.+++.++ +++|++|++.. ..|.+.. +...++..|++++.+|++. ++.++.++|+++|.. ++++
T Consensus 66 ~g~t~a~~~~~~~~-~~~gd~Vl~~~-~~~~~~~-~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~------~~~~ 135 (392)
T 2z9v_A 66 GEPVLGLEAAAASL-ISPDDVVLNLA-SGVYGKG-FGYWAKRYSPHLLEIEVPY-NEAIDPQAVADMLKA------HPEI 135 (392)
T ss_dssp SCTHHHHHHHHHHH-CCTTCCEEEEE-SSHHHHH-HHHHHHHHCSCEEEEECCT-TSCCCHHHHHHHHHH------CTTC
T ss_pred CCchHHHHHHHHHh-cCCCCEEEEec-CCcccHH-HHHHHHHcCCceEEeeCCC-CCCCCHHHHHHHHhc------CCCC
Confidence 99999999999987 67899987763 3455553 5566677899999999976 467899999998853 1257
Q ss_pred eEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 303 GLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
++|++++.+|.||.++|++ +++.|+++|+++++|+++..|. .++++..+++|++++|+||++++ |.|+|+++++++
T Consensus 136 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~--~~~~~~~~~~d~~~~s~sK~~~~-~~g~G~l~~~~~ 212 (392)
T 2z9v_A 136 TVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGG--MKTHPEDCKADIYVTGPNKCLGA-PPGLTMMGVSER 212 (392)
T ss_dssp CEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTT--BSCCGGGGTCSEEEECSSSTTCC-CSCCEEEEECHH
T ss_pred cEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCC--cccccccccceEEEecCcccccC-CCceeEEEECHH
Confidence 8999999999999999997 4577899999999999998886 57888888899999999998766 789999999988
Q ss_pred CcccccC
Q 002866 382 VMGSLQN 388 (872)
Q Consensus 382 ~i~~L~P 388 (872)
.++.+++
T Consensus 213 ~~~~l~~ 219 (392)
T 2z9v_A 213 AWAKMKA 219 (392)
T ss_dssp HHHHHHT
T ss_pred HHHHhhh
Confidence 7766654
No 11
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.95 E-value=4.7e-26 Score=240.75 Aligned_cols=202 Identities=15% Similarity=0.131 Sum_probs=163.2
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc--------hHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE--------KGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps--------S~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++|||++++++.|+.+++++.+ .... .++|++ ....+.++|+.+++++|++++ .|+|
T Consensus 1 ~~yld~~~~~~~~~~v~~a~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~--~v~~ 65 (382)
T 4eb5_A 1 MAYFDYTSAKPVDERILEAMLP--------YMTE-----SFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG--TVVF 65 (382)
T ss_dssp -CBCBTTTCCCCCHHHHHHHHH--------HHHT-----SCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTE--EEEE
T ss_pred CeeeccCCCCCCCHHHHHHHHH--------HHHh-----ccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEE
Confidence 5899999999999999988533 1111 234443 135788999999999999765 5999
Q ss_pred eCCHHHHHHHHHhhCC---CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCC
Q 002866 222 TVSRGSAFKLLAESYP---FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 222 TsnATeALnLVaeslp---f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~ 298 (872)
|+|+|+|+.+++.++. .++|++|++. +..|.++......++..|++++.+|+++ ++.++.++|+++|..
T Consensus 66 ~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~-~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~------ 137 (382)
T 4eb5_A 66 TSGATEANNLAIIGYAMRNARKGKHILVS-AVEHMSVINPAKFLQKQGFEVEYIPVGK-YGEVDVSFIDQKLRD------ 137 (382)
T ss_dssp ESSHHHHHHHHHHHHHHHHGGGCCEEEEE-TTCCHHHHHHHHHHTTTTCEEEEECBCT-TSCBCHHHHHHHCCT------
T ss_pred cCchHHHHHHHHHHHHhhccCCCCEEEEC-CCcchHHHHHHHHHHhCCcEEEEeccCC-CCccCHHHHHHHhcC------
Confidence 9999999999998874 2678998876 3456666555555556799999999985 577899999888752
Q ss_pred CCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEE
Q 002866 299 DSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLL 377 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~Ly 377 (872)
++++|++++.+|.||.++|++ +++.|+++|++ ++|+++..|. .++++..+++|++++|+||++| |.|+|+++
T Consensus 138 --~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~--~~~~~~~~~~di~~~s~sK~~g--~~g~G~~~ 210 (382)
T 4eb5_A 138 --DTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQ--IEVDVEKIGADMLTISSNDIYG--PKGVGALW 210 (382)
T ss_dssp --TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTT--BCCCHHHHTCSEEEEETGGGTC--CSSCEEEE
T ss_pred --CCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCC--cccCccccCCCEEEeehHHhcC--CCceEEEE
Confidence 489999999999999999997 45778999999 9999999886 5777776789999999999987 77999999
Q ss_pred EeCC
Q 002866 378 IKKS 381 (872)
Q Consensus 378 VRk~ 381 (872)
++++
T Consensus 211 ~~~~ 214 (382)
T 4eb5_A 211 IRKE 214 (382)
T ss_dssp EETT
T ss_pred Eccc
Confidence 9876
No 12
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.94 E-value=1e-25 Score=244.44 Aligned_cols=215 Identities=14% Similarity=0.137 Sum_probs=161.2
Q ss_pred HHhhcccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc--------hHHHHHHHHHHHHHhc
Q 002866 139 LRANEYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE--------KGTVEHDIKTRIMDHL 210 (872)
Q Consensus 139 lR~~EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps--------S~~~ieeARerIA~lL 210 (872)
.|..+||.+.+.+|||+++.++.|+.+++++.+ .+ .. .+++|+ ..+.++++|+.||+++
T Consensus 8 ~~~~~~~~~~~~~~Ld~~~~~~~~~~v~~a~~~-------~~-~~-----~~~~~~~~~~~~~~~~~~~~~l~~~la~~~ 74 (432)
T 3a9z_A 8 ARGSVESPPNRKVYMDYNATTPLEPEVIQAVTE-------AM-KE-----AWGNPSSSYVAGRKAKDIINTARASLAKMI 74 (432)
T ss_dssp ----------CCEECBTTTCCCCCHHHHHHHHH-------HH-HH-----CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCcEEeeCCccCCCCHHHHHHHHH-------HH-HH-----hcCCCccCcHHHHHHHHHHHHHHHHHHHHc
Confidence 355689999889999999999999999887543 12 11 234443 1246789999999999
Q ss_pred CCCCCCCcEEEeCCHHHHHHHHHhhCC--C-----CCCC-------------eEEEecccCchhHH-HHHHHHHHcCcEE
Q 002866 211 NIPENEYGLVFTVSRGSAFKLLAESYP--F-----HTNK-------------KLLTMFDYESQSVN-WMAQSAKEKGAKV 269 (872)
Q Consensus 211 gA~~dEY~VVFTsnATeALnLVaeslp--f-----~~Gd-------------~ILT~~DhEHnSVl-~~~~~AkrkGaeV 269 (872)
|++++ .|+||+|+|+|+.+++.++. | ++|+ .|++. ..+|.++. .|...++..|+++
T Consensus 75 g~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~-~~~h~s~~~~~~~~~~~~g~~v 151 (432)
T 3a9z_A 75 GGKPQ--DIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITC-TVEHDSIRLPLEHLVEDQVAEV 151 (432)
T ss_dssp TCCGG--GEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEE-TTCCHHHHHHHHHHHHTTSCEE
T ss_pred CCCcC--eEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEe-cCcchhHHHHHHHHHHhcCcEE
Confidence 99765 59999999999999888763 1 3564 45544 34677774 4555566679999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCC----------cEEEeecc
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNH----------WHVLLDAG 338 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G----------~~VLVDAA 338 (872)
+.+|++..++.++.++|+++|.. ++++|++++.+|.||.++|++. .+.|+++| +++++|++
T Consensus 152 ~~v~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea 223 (432)
T 3a9z_A 152 TFVPVSKVNGQVEVEDILAAVRP--------TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAA 223 (432)
T ss_dssp EEECCCTTTSSCCHHHHHHTCCT--------TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECT
T ss_pred EEEecCcccCCcCHHHHHHhccC--------CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEch
Confidence 99998764577899999877742 5899999999999999999974 56788888 99999999
Q ss_pred ccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 339 SLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 339 Q~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
+..+. .++++...++|++++|+||||| |. +|+++++++.
T Consensus 224 ~~~~~--~~~~~~~~~~d~~~~s~~K~~g--~~-~G~~~~~~~~ 262 (432)
T 3a9z_A 224 QALGK--RRVDVEDLGVDFLTIVGHKFYG--PR-IGALYVRGVG 262 (432)
T ss_dssp TTTTT--SCCCHHHHCCSEEEEEGGGTTC--CS-CEEEEETTBT
T ss_pred hhhCC--cccChhhcCCCEEEEehhHhcC--Cc-ceEEEEcccc
Confidence 98886 5778777789999999999987 76 9999998765
No 13
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.94 E-value=1.6e-25 Score=240.86 Aligned_cols=229 Identities=12% Similarity=0.092 Sum_probs=173.6
Q ss_pred HHHHHHhhCCCCCCchhHHHHHhhcccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch---
Q 002866 119 AFSKFLTMYPKYQSSDKIDQLRANEYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK--- 195 (872)
Q Consensus 119 a~~~FL~~~p~y~~t~~ID~lR~~EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS--- 195 (872)
.++..|+.. .++..+|+ +||.+++.+|||+++.++.|+.+++++.+ .+ .. .++++..
T Consensus 5 ~~~~~~~~~------~~~~~~r~-~f~~~~~~~yld~~~~~~~~~~v~~a~~~-------~l-~~-----~~~~~~~~~~ 64 (416)
T 1qz9_A 5 NDCLALDAQ------DSLAPLRQ-QFALPEGVIYLDGNSLGARPVAALARAQA-------VI-AE-----EWGNGLIRSW 64 (416)
T ss_dssp HHHHHHHHT------CTTGGGGG-GBCCCTTCEECCTTTSCCCBTTHHHHHHH-------HH-HT-----CCCCCGGGHH
T ss_pred hHHHhcccc------chhHHHHH-hCCCCCCeEeecCCCcCCCcHHHHHHHHH-------HH-HH-----HHhccCcccc
Confidence 455566544 24667886 79999889999999999999888887532 11 11 2344321
Q ss_pred -----HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC-CC----CCCCeEEEecccCchhHHH-HHHHHHH
Q 002866 196 -----GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY-PF----HTNKKLLTMFDYESQSVNW-MAQSAKE 264 (872)
Q Consensus 196 -----~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl-pf----~~Gd~ILT~~DhEHnSVl~-~~~~Akr 264 (872)
...+.++|+.|++++|++++ .|+||+|+|+|+.+++.++ .+ ++|+++|+.....|.++.. +...++.
T Consensus 65 ~~~~~~~~~~~l~~~la~~~g~~~~--~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~ 142 (416)
T 1qz9_A 65 NSAGWRDLSERLGNRLATLIGARDG--EVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADM 142 (416)
T ss_dssp HHTSGGGHHHHHHHHHHTTTTCCTT--SEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHcCCCcc--cEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHH
Confidence 25678999999999999765 4999999999998777765 45 7888754443445666543 4444444
Q ss_pred c--CcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccC
Q 002866 265 K--GAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLG 341 (872)
Q Consensus 265 k--GaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~a 341 (872)
. |++++.+|+ .++|+++|.. ++++|++++.+|.||.++|++. ++.|+++|+++++|++|..
T Consensus 143 ~~~g~~~~~v~~--------~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~ 206 (416)
T 1qz9_A 143 LQQGYTLRLVDS--------PEELPQAIDQ--------DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSA 206 (416)
T ss_dssp HCSSCEEEEESS--------GGGHHHHCST--------TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred hcCCceEEEeCc--------HHHHHHHhCC--------CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccc
Confidence 4 999988875 5677776642 5899999999999999999974 5678999999999999998
Q ss_pred CCCCccCCCCCCCCcEEEEcccccCCCCCCce-EEEEEeCCCcccccC
Q 002866 342 PKDMDSLGLSLFRPDFIITSFYRVFGFDPTGF-GCLLIKKSVMGSLQN 388 (872)
Q Consensus 342 G~~mipLDLs~l~~DFlv~S~HK~fG~~PtGv-G~LyVRk~~i~~L~P 388 (872)
|. .++++..+++|++++|+||++++ +.|+ |+++++++.++.+.+
T Consensus 207 g~--~~~~~~~~~~d~~~~s~~K~l~~-g~~~~g~l~~~~~~~~~l~~ 251 (416)
T 1qz9_A 207 GA--VPVDLHQAGADYAIGCTYKYLNG-GPGSQAFVWVSPQLCDLVPQ 251 (416)
T ss_dssp TT--SCCCHHHHTCSEEEECSSSTTCC-CTTCCCEEEECTTTTTTSCC
T ss_pred cC--cCCChhhcCCCEEEecCcccCCC-CCCCeEEEEECHHHHhccCC
Confidence 86 57777777899999999999754 4566 999999998777765
No 14
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.94 E-value=1e-24 Score=230.82 Aligned_cols=223 Identities=14% Similarity=0.115 Sum_probs=178.4
Q ss_pred HHHHhhcccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCC
Q 002866 137 DQLRANEYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENE 216 (872)
Q Consensus 137 D~lR~~EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dE 216 (872)
..+|+ +||.++..+|||+++.+++++.+++++.+ .+. ..|+ +......+++++.+++++|++ +.
T Consensus 8 ~~~r~-~f~~~~~~~~l~~~~~~~~~~~v~~a~~~-----------~~~--~~~~-~~~~~~~~~~~~~la~~~g~~-~~ 71 (386)
T 2dr1_A 8 EAFKE-VYEMVKPKYKLFTAGPVACFPEVLEIMKV-----------QMF--SHRS-KEYRKVHMDTVERLREFLEVE-KG 71 (386)
T ss_dssp HHHHH-HHHHHSCCSEECCSSSCCCCHHHHHHTTS-----------CCC--CTTS-HHHHHHHHHHHHHHHHHHTCS-SS
T ss_pred HHHHH-HHhhcCccceeecCCCcCCcHHHHHHHhc-----------ccc--cccC-HHHHHHHHHHHHHHHHHhCCC-CC
Confidence 45675 69989889999999999999999887543 111 1222 223567889999999999997 23
Q ss_pred CcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhcc
Q 002866 217 YGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRR 296 (872)
Q Consensus 217 Y~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr 296 (872)
..|+||+|+|+|+.+++.++ +++|++|++.. ..|.+. .+...++..|++++.++++. ++.++.++|+++|..
T Consensus 72 ~~v~~~~g~t~a~~~~~~~l-~~~gd~vl~~~-~~~~~~-~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~---- 143 (386)
T 2dr1_A 72 EVLLVPSSGTGIMEASIRNG-VSKGGKVLVTI-IGAFGK-RYKEVVESNGRKAVVLEYEP-GKAVKPEDLDDALRK---- 143 (386)
T ss_dssp EEEEESSCHHHHHHHHHHHH-SCTTCEEEEEE-SSHHHH-HHHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHH----
T ss_pred cEEEEeCChHHHHHHHHHHh-hcCCCeEEEEc-CCchhH-HHHHHHHHhCCceEEEecCC-CCCCCHHHHHHHHhc----
Confidence 36999999999999999987 57899987663 234432 24556777899999999976 567899999999853
Q ss_pred CCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEE
Q 002866 297 KKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGC 375 (872)
Q Consensus 297 ~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~ 375 (872)
++++++|.+++.+|.||.+.|++ +++.|+++|+++++|+++..+. .++++..+++|++++|+||+|+. |.|+|+
T Consensus 144 --~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~di~~~s~sK~~~~-~~g~G~ 218 (386)
T 2dr1_A 144 --NPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGG--ADIKFDKWGLDVVFSSSQKAFGV-PPGLAI 218 (386)
T ss_dssp --CTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTT--BCCCTTTTTCSEEEEETTSTTCC-CSSCEE
T ss_pred --CCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccC--ccccccccCCcEEEEeccccccC-CCceEE
Confidence 12588999999999999999997 4578899999999999998886 56788888999999999999997 778999
Q ss_pred EEEeCCCcccccC
Q 002866 376 LLIKKSVMGSLQN 388 (872)
Q Consensus 376 LyVRk~~i~~L~P 388 (872)
++++++.++.+.+
T Consensus 219 ~~~~~~~~~~~~~ 231 (386)
T 2dr1_A 219 GAFSERFLEIAEK 231 (386)
T ss_dssp EEECHHHHHHHTT
T ss_pred EEECHHHHHHHhc
Confidence 9999877666653
No 15
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.94 E-value=3.1e-24 Score=231.39 Aligned_cols=215 Identities=14% Similarity=0.137 Sum_probs=172.2
Q ss_pred CCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch---------HHHHHHHHHHHHHhcCCCCCCC
Q 002866 147 LSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK---------GTVEHDIKTRIMDHLNIPENEY 217 (872)
Q Consensus 147 L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS---------~~~ieeARerIA~lLgA~~dEY 217 (872)
-+..||||+++.++.|+.+++++.+. +.....|++|++ ...++++|+.+++++|++++
T Consensus 20 ~~~~iyld~~~~~~~~~~v~~a~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-- 86 (423)
T 3lvm_A 20 MKLPIYLDYSATTPVDPRVAEKMMQF-----------MTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-- 86 (423)
T ss_dssp CCSSEECBTTTCCCCCHHHHHHHTTS-----------SSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG--
T ss_pred cCCCEeecCCCcCCCCHHHHHHHHHH-----------HhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC--
Confidence 35699999999999999999886431 110024555543 35778999999999999865
Q ss_pred cEEEeCCHHHHHHHHHhhCC---CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhh
Q 002866 218 GLVFTVSRGSAFKLLAESYP---FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKK 294 (872)
Q Consensus 218 ~VVFTsnATeALnLVaeslp---f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~ 294 (872)
.|+||+|+|+|+.+++.++. -.+|+.|++.. ..|.++......++..|+++..+|++. ++.++.++|+++|..
T Consensus 87 ~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~-~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~-- 162 (423)
T 3lvm_A 87 EIVFTSGATESDNLAIKGAANFYQKKGKHIITSK-TEHKAVLDTCRQLEREGFEVTYLAPQR-NGIIDLKELEAAMRD-- 162 (423)
T ss_dssp GEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEET-TSCHHHHHHHHHHHHTTCEEEEECCCT-TSCCCHHHHHHHCCT--
T ss_pred eEEEeCChHHHHHHHHHHHHHhhccCCCEEEECC-ccchHHHHHHHHHHHcCCEEEEeccCC-CCccCHHHHHHhcCC--
Confidence 59999999999999888764 13689988763 345666544444577899999999986 678899999988853
Q ss_pred ccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCce
Q 002866 295 RRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGF 373 (872)
Q Consensus 295 rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGv 373 (872)
++++|++++.+|.||.++|++ +++.|+++|+++++|+++..+. .++++...++|++++|+||+|| |.|+
T Consensus 163 ------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~--~~~~~~~~~~di~~~s~sK~~g--~~g~ 232 (423)
T 3lvm_A 163 ------DTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGK--LPIDLSQLKVDLMSFSGHKIYG--PKGI 232 (423)
T ss_dssp ------TEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTT--SCCCTTTSCCSEEEEESTTTTS--CSSC
T ss_pred ------CcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCC--CCcChhhcCCCEEEechHHhcC--CCCe
Confidence 589999999999999999997 4567899999999999999886 5788888999999999999887 6789
Q ss_pred EEEEEeCCCcccccC
Q 002866 374 GCLLIKKSVMGSLQN 388 (872)
Q Consensus 374 G~LyVRk~~i~~L~P 388 (872)
|+++++++....+.+
T Consensus 233 G~~~~~~~~~~~~~~ 247 (423)
T 3lvm_A 233 GALYVRRKPRVRIEA 247 (423)
T ss_dssp EEEEECBTTBCCCCC
T ss_pred EEEEEeccccCCCCc
Confidence 999999887665543
No 16
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.94 E-value=2.3e-25 Score=237.95 Aligned_cols=204 Identities=15% Similarity=0.075 Sum_probs=163.5
Q ss_pred CCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch--------HHHHHHHHHHHHHhcCCCCCCCcE
Q 002866 148 SPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK--------GTVEHDIKTRIMDHLNIPENEYGL 219 (872)
Q Consensus 148 ~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS--------~~~ieeARerIA~lLgA~~dEY~V 219 (872)
+.+||||+++.+++|+.+++++.+ .+.. .++||++ ...++++|+.+|+++|++++ .|
T Consensus 19 ~~~iyld~~~~~~~~~~v~~a~~~-------~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~--~v 83 (400)
T 3vax_A 19 SHMTYLDAAATTRVDQRVADIVLH-------WMTA------EFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD--EL 83 (400)
T ss_dssp ---CCCCCCCCSSSCHHHHHHHHH-------HHHH------HHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG--GE
T ss_pred CCcEEecCCCCCCCCHHHHHHHHH-------HHHh------ccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC--cE
Confidence 458999999999999999987543 1111 1344432 25678999999999999865 59
Q ss_pred EEeCCHHHHHHHHHhhCC-C--CCCC-eEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhc
Q 002866 220 VFTVSRGSAFKLLAESYP-F--HTNK-KLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKR 295 (872)
Q Consensus 220 VFTsnATeALnLVaeslp-f--~~Gd-~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~r 295 (872)
+||+|+|+|+++++.++. + ++|| +|++. +.+|.++......+++.|+++..+|++. ++.++.++|+++|..
T Consensus 84 ~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~-~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~--- 158 (400)
T 3vax_A 84 IFTSGATESNNIALLGLAPYGERTGRRHIITS-AIEHKAVLEPLEHLAGRGFEVDFLTPGP-SGRISVEGVMERLRP--- 158 (400)
T ss_dssp EEESCHHHHHHHHHHTTHHHHHHHTCCEEEEE-TTSCHHHHHHHHHHHTTTCEEEEECCCT-TCCCCHHHHHTTCCT---
T ss_pred EEeCCHHHHHHHHHHHHHHhhccCCCCEEEEC-ccccHhHHHHHHHHHhcCCeEEEEccCC-CCCcCHHHHHHhcCC---
Confidence 999999999999999873 2 5789 88876 3456676554455566899999999986 678899999877742
Q ss_pred cCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceE
Q 002866 296 RKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFG 374 (872)
Q Consensus 296 r~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG 374 (872)
++++|++++.+|.||.++|++ +++.|+++|+++++|++++.|. .++++..+ +|++++|+||++| |.|+|
T Consensus 159 -----~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~--~~~~~~~~-~d~~~~s~~K~~g--~~g~g 228 (400)
T 3vax_A 159 -----DTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGK--VPGDLTTP-IDMISISGHKIGA--PKGVG 228 (400)
T ss_dssp -----TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTT--SGGGGGSC-CSEEEEETGGGTS--CSSCE
T ss_pred -----CceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCC--CCcChhhc-CcEEEEeHHHhCC--CCceE
Confidence 589999999999999999997 4567899999999999999886 57888877 9999999999877 78999
Q ss_pred EEE-EeCC
Q 002866 375 CLL-IKKS 381 (872)
Q Consensus 375 ~Ly-VRk~ 381 (872)
++| ++++
T Consensus 229 ~~~~~~~~ 236 (400)
T 3vax_A 229 ALVTRRRE 236 (400)
T ss_dssp EEEECBCS
T ss_pred EEEEecch
Confidence 999 8874
No 17
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.93 E-value=1.2e-23 Score=222.03 Aligned_cols=203 Identities=16% Similarity=0.137 Sum_probs=164.7
Q ss_pred eecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch--------HHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 151 VCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK--------GTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 151 IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS--------~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+|||+++.++.|+.+++++.+ ... ..|++|+. ...+.++|+.+++++|++++ .|+||
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~--------~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~--~v~~~ 67 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIV--------FYR-----EKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS--EIFFT 67 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHH--------HHH-----TCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG--GEEEE
T ss_pred EEEecCccCCCCHHHHHHHHH--------HHH-----hcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC--eEEEE
Confidence 899999999999999987533 111 13445431 35678999999999999865 59999
Q ss_pred CCHHHHHHHHHhhCC---CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCC
Q 002866 223 VSRGSAFKLLAESYP---FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKD 299 (872)
Q Consensus 223 snATeALnLVaeslp---f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~ 299 (872)
+|+|+|+.+++.++. +++|++|++. +..|.++......++..|+++..+|++. ++.++.++|+++|..
T Consensus 68 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~-~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~------- 138 (384)
T 1eg5_A 68 SCATESINWILKTVAETFEKRKRTIITT-PIEHKAVLETMKYLSMKGFKVKYVPVDS-RGVVKLEELEKLVDE------- 138 (384)
T ss_dssp SCHHHHHHHHHHHHHHHTTTTCCEEEEC-TTSCHHHHHHHHHHHHTTCEEEECCBCT-TSCBCHHHHHHHCCT-------
T ss_pred CCHHHHHHHHHHhhhhhccCCCCEEEEC-CCCchHHHHHHHHHHhcCCEEEEEccCC-CCccCHHHHHHHhCC-------
Confidence 999999999999876 3789998876 3355666554445567899999999875 577899999888752
Q ss_pred CCceEEEEeCccCcccchhcHH-HHHHHHHCC--cEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 002866 300 SAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNH--WHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCL 376 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G--~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~L 376 (872)
++++|.+++.+|.||.++|++ +++.|+++| +++++|+++..+. .++++..+++|++++|+||+|| |.|+|++
T Consensus 139 -~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~--~~~~~~~~~~di~~~s~sK~~g--~~G~G~~ 213 (384)
T 1eg5_A 139 -DTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGK--IPFSLEKLEVDYASFSAHKFHG--PKGVGIT 213 (384)
T ss_dssp -TEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTT--SCCCCTTTCCSEEEEEGGGGTS--CTTCEEE
T ss_pred -CCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCC--cccCchhcCCCEEEecHHHhcC--CCceEEE
Confidence 589999999999999999997 456789999 9999999998775 4778877889999999999988 6789999
Q ss_pred EEeCCC
Q 002866 377 LIKKSV 382 (872)
Q Consensus 377 yVRk~~ 382 (872)
+++++.
T Consensus 214 ~~~~~~ 219 (384)
T 1eg5_A 214 YIRKGV 219 (384)
T ss_dssp EECTTS
T ss_pred EEcCCC
Confidence 998764
No 18
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.93 E-value=1.2e-23 Score=222.03 Aligned_cols=206 Identities=14% Similarity=0.036 Sum_probs=164.6
Q ss_pred ecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHH
Q 002866 152 CLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKL 231 (872)
Q Consensus 152 YLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnL 231 (872)
++.+.+..++++.+++++.+. +. .+..+...+.++++|+.+++++|++++...|+||+|+|+|+.
T Consensus 4 ~~~~~gp~~~~~~v~~a~~~~-----------~~---~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~- 68 (384)
T 3zrp_A 4 LLLHVGPTTIKEDVLVAGLEN-----------NV---GFTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME- 68 (384)
T ss_dssp --CCSSCSCCCHHHHHHTTCC-----------SC---CTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-
T ss_pred eeccCCCCCCCHHHHHHhhcc-----------cc---ccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-
Confidence 566677788888888875331 11 112233357889999999999999873236999999999999
Q ss_pred HHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCcc
Q 002866 232 LAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQS 311 (872)
Q Consensus 232 Vaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vS 311 (872)
++.++ +++||+|++.. ..|.+. .+...++..|++++.+|++. ++.++.++|+++|... ++++|++++.+
T Consensus 69 ~~~~~-~~~gd~vi~~~-~~~~~~-~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~-------~~~~v~~~~~~ 137 (384)
T 3zrp_A 69 SVTSL-LKPNDKILVVS-NGVFGD-RWEQIFKRYPVNVKVLRPSP-GDYVKPGEVEEEVRKS-------EYKLVALTHVE 137 (384)
T ss_dssp HGGGG-CCTTCEEEEEC-SSHHHH-HHHHHHTTSSCEEEEECCST-TCCCCHHHHHHHHHHS-------CEEEEEEESEE
T ss_pred HHHhh-cCCCCEEEEec-CCcchH-HHHHHHHHcCCcEEEecCCC-CCCCCHHHHHHHHHhC-------CCcEEEEeCCC
Confidence 88777 68899988763 234332 35556677899999999987 5778999999999742 48999999999
Q ss_pred CcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 312 RVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 312 NvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
|.||.++|++. ++.|+++|+++++|++|..+. .++++...++|++++|+||+|++ |.|+|+++++++.++.+
T Consensus 138 nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~~-~~g~g~~~~~~~~~~~~ 210 (384)
T 3zrp_A 138 TSTGVREPVKDVINKIRKYVELIVVDGVSSVGA--EEVKAEEWNVDVYLTASQKALGS-AAGLGLLLLSPKALSIL 210 (384)
T ss_dssp TTTTEECCHHHHHHHHGGGEEEEEEECTTTTTT--SCCCTTTTTCSEEEEETTSTTCC-CSSEEEEEECHHHHHHH
T ss_pred CCCceECcHHHHHHHHHhcCCEEEEECcccccC--ccccccccCCCEEEecCcccccC-CCceEEEEECHHHHHHh
Confidence 99999999984 567899999999999999886 58888888999999999999876 78999999999887766
No 19
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.93 E-value=1.1e-23 Score=224.60 Aligned_cols=217 Identities=13% Similarity=0.047 Sum_probs=174.7
Q ss_pred cccCCCC-ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 143 EYLHLSP-KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 143 EFP~L~~-~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
.||.|.. .+|+|+.+..++|+.+++++.+ .+.. .| ++.....+.++|+.+++++|++++ +.|+|
T Consensus 11 ~~~~~~~~~~~~~~~g~~~~~~~v~~a~~~-----------~~~~--~~-~~~~~~~~~~l~~~la~~~g~~~~-~~i~~ 75 (393)
T 2huf_A 11 LREPLVTPNKLLMGPGPSNAPQRVLDAMSR-----------PILG--HL-HPETLKIMDDIKEGVRYLFQTNNI-ATFCL 75 (393)
T ss_dssp GGSCCCCCCCEECSSSCCCCCHHHHHHTTS-----------CCCC--TT-SHHHHHHHHHHHHHHHHHHTCCCS-EEEEE
T ss_pred hhcccCCCCeEEecCCCCCCCHHHHHHHHh-----------hhcc--CC-CHHHHHHHHHHHHHHHHHhCCCCC-cEEEE
Confidence 5887765 8999999999999999887543 1111 12 343456789999999999999764 36999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSA 301 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~ 301 (872)
|+|+|+|+.+++.++ +++|++|++.. ..|.+. .+...++..|++++.+|+++ ++.++.++|+++|... +
T Consensus 76 ~~g~t~a~~~~~~~~-~~~gd~vl~~~-~~~~~~-~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~-------~ 144 (393)
T 2huf_A 76 SASGHGGMEATLCNL-LEDGDVILIGH-TGHWGD-RSADMATRYGADVRVVKSKV-GQSLSLDEIRDALLIH-------K 144 (393)
T ss_dssp SSCHHHHHHHHHHHH-CCTTCEEEEEE-SSHHHH-HHHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHH-------C
T ss_pred cCcHHHHHHHHHHHH-hCCCCEEEEEC-CCcchH-HHHHHHHHcCCeeEEEeCCC-CCCCCHHHHHHHHhcc-------C
Confidence 999999999999987 67899987653 234443 34555677899999999976 4678999999998641 3
Q ss_pred ceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeC
Q 002866 302 AGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 302 T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
+++|++++.+|.||.++|++ +++.|+++|+++++|++|..+. .++++..+++|++++|+||++++ |.|+|++++++
T Consensus 145 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~sK~l~g-~~G~G~~~~~~ 221 (393)
T 2huf_A 145 PSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGG--APMFMDRWEIDAMYTGSQKVLGA-PPGITPVSFSH 221 (393)
T ss_dssp CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTT--BCCCTTTTTCSEEECCSSSTTCC-CSSCEEEEECH
T ss_pred CcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCC--CCcchhhcCccEEEECCCccccc-CCCeEEEEECH
Confidence 78999999999999999997 5678899999999999999886 57888888999999999998666 78999999998
Q ss_pred CCcccccC
Q 002866 381 SVMGSLQN 388 (872)
Q Consensus 381 ~~i~~L~P 388 (872)
+.++.+.+
T Consensus 222 ~~~~~~~~ 229 (393)
T 2huf_A 222 RAVERYKR 229 (393)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 77766653
No 20
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.93 E-value=6.4e-26 Score=252.09 Aligned_cols=243 Identities=8% Similarity=-0.044 Sum_probs=166.4
Q ss_pred CCCCCCc-hhHHHHHhhcccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhh-ccCcCcCCCc------hHHH
Q 002866 127 YPKYQSS-DKIDQLRANEYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANL-SNHALYGGAE------KGTV 198 (872)
Q Consensus 127 ~p~y~~t-~~ID~lR~~EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL-~~~~~ygNps------S~~~ 198 (872)
.|+.+.+ +++.++|+ +||.++..+||||+|+||.|+.|++++....++. .+.... .......||. ..+.
T Consensus 58 lp~~g~~~~~i~~~~~-~~~~~~~~~yld~aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (456)
T 2z67_A 58 IPENGIDDEKIKLFLK-FLSMMDTDKDPKSVRIGEREARTYSKIHEELSSG--FCHGIGRSGNLVDPQPKASGASIMYAL 134 (456)
T ss_dssp CCSSCCCHHHHHHHHH-HHHTTBGGGCTTCEECSSCCCCCSCHHHHHHTTT--CTTCBSBTTBTTSCCTTBHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHH-HHHhccccccccccccccccccccccccCccccc--cCCCccHHHHHHhhCcccccCcHHHHH
Confidence 3443333 46888886 6999988999999999999988877643210000 000000 0000112321 2467
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHH-HHhhC-CCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc-
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKL-LAESY-PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK- 275 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnL-Vaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd- 275 (872)
++++|+.+|+++|++++ ++||+|+|++.++ ++.++ .+.+++.||++.. +|.++. +.++..|++++.+++.
T Consensus 135 ~~~~~~~la~~~g~~~~---~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~-~h~s~~---~~~~~~G~~~~~v~~~~ 207 (456)
T 2z67_A 135 TNKILESFFKQLGLNVH---AIATPISTGMSISLCLSAARKKYGSNVVIYPYA-SHKSPI---KAVSFVGMNMRLVETVL 207 (456)
T ss_dssp HHHHHHHHHHHTTCCCE---EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECC-CCHHHH---HHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHcCCCCC---EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECC-CcHHHH---HHHHHcCCCceEEEEec
Confidence 78999999999999753 9999999964443 33222 1224566665533 677643 4456689999998862
Q ss_pred -CCCCccCHHHHHHHH-hhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeecc---ccCCCCCccCC
Q 002866 276 -WPTLKLCSTDLRKQI-SSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAG---SLGPKDMDSLG 349 (872)
Q Consensus 276 -~p~g~Id~edLe~~I-~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAA---Q~aG~~mipLD 349 (872)
..++.++.++|+++| .... ..++.+|+++..+|.||++.|++. .+.|+++|++++||+| |++|. .+++
T Consensus 208 ~~~~~~~d~~~l~~~i~~~~~----~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~--~~~~ 281 (456)
T 2z67_A 208 DGDRVYVPVEDIENAIKKEIE----LGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYY--LEKL 281 (456)
T ss_dssp ETTEEECCHHHHHHHHHHHHH----TTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHH--HHHH
T ss_pred cCCCCCcCHHHHHHHHHHHhh----CCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHh--hHHH
Confidence 235789999999999 4210 125778888888999999999985 5678999999999954 55554 4555
Q ss_pred CCCC--CCcEEEEcccccCCCCCCceEEEEEeC-CCcccc
Q 002866 350 LSLF--RPDFIITSFYRVFGFDPTGFGCLLIKK-SVMGSL 386 (872)
Q Consensus 350 Ls~l--~~DFlv~S~HK~fG~~PtGvG~LyVRk-~~i~~L 386 (872)
+..+ ++||+++|+|||+++ |.|+|+||+|+ +.+..+
T Consensus 282 ~~~~~~~~D~~~~s~hK~~~~-p~g~G~l~~~~~~~~~~l 320 (456)
T 2z67_A 282 KKAFKYRVDAVVSSSDKNLLT-PIGGGLVYSTDAEFIKEI 320 (456)
T ss_dssp HHHHTSCCSEEEEEHHHHHCC-CSSCEEEEESCHHHHHHH
T ss_pred HHhhCCCCCEEEEcCCCCcCC-CCCeEEEEEcCHHHHhhc
Confidence 5444 899999999999777 89999999964 444444
No 21
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.92 E-value=1.6e-23 Score=223.63 Aligned_cols=223 Identities=12% Similarity=0.039 Sum_probs=178.5
Q ss_pred hHHHHHhhcccCCCC-ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCC
Q 002866 135 KIDQLRANEYLHLSP-KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIP 213 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~-~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~ 213 (872)
..+++|. +||.+.. .+|||+++.+++++.+++++.+ .+. ..|+ +......+++++.+++++|++
T Consensus 19 ~~~~~r~-~~~~~~~~~~~l~~~~~~~~~~~v~~a~~~-----------~~~--~~~~-~~~~~~~~~~~~~la~~~g~~ 83 (393)
T 1vjo_A 19 INDNQRL-QLEPLEVPSRLLLGPGPSNAHPSVLQAMNV-----------SPV--GHLD-PAFLALMDEIQSLLRYVWQTE 83 (393)
T ss_dssp CCCTTCC-CCCSCCCCCCEECSSSCCCCCHHHHHHHSS-----------CCC--CTTS-HHHHHHHHHHHHHHHHHHTCC
T ss_pred ecchhhh-cCCccCCccceeccCCCCCCCHHHHHHHhc-----------ccc--cccC-HHHHHHHHHHHHHHHHHhCCC
Confidence 4566775 7998765 7899999999999999887543 111 1222 223467889999999999997
Q ss_pred CCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhh
Q 002866 214 ENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSK 293 (872)
Q Consensus 214 ~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~ 293 (872)
++ +.|+||+|+|+|+++++.++ +++|++|++... .|.+. .+...++..|+++..+|++. ++.++.++|+++|...
T Consensus 84 ~~-~~v~~t~g~t~al~~~~~~~-~~~gd~Vl~~~~-~~~~~-~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~ 158 (393)
T 1vjo_A 84 NP-LTIAVSGTGTAAMEATIANA-VEPGDVVLIGVA-GYFGN-RLVDMAGRYGADVRTISKPW-GEVFSLEELRTALETH 158 (393)
T ss_dssp CS-CEEEESSCHHHHHHHHHHHH-CCTTCEEEEEES-SHHHH-HHHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHH
T ss_pred CC-cEEEEeCchHHHHHHHHHhc-cCCCCEEEEEcC-ChhHH-HHHHHHHHcCCceEEEecCC-CCCCCHHHHHHHHhhC
Confidence 54 35999999999999999987 578999876532 33331 24556677899999999976 5678999999998641
Q ss_pred hccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCc
Q 002866 294 KRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTG 372 (872)
Q Consensus 294 ~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtG 372 (872)
++++|++++.+|.||.++|++ +++.|+++|+++++|+++..|. .++++...++|++++|+||+|++ |.|
T Consensus 159 -------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~--~~~~~~~~~~di~~~s~sK~l~~-~~~ 228 (393)
T 1vjo_A 159 -------RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGG--VPIFLDAWGVDLAYSCSQKGLGC-SPG 228 (393)
T ss_dssp -------CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTT--SCCCTTTTTCSEEECCSSSTTCS-CSS
T ss_pred -------CceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccC--cCCcccccCccEEEEcCcccccC-CCc
Confidence 378999999999999999997 5678899999999999998886 58888888999999999999887 779
Q ss_pred eEEEEEeCCCccccc
Q 002866 373 FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 vG~LyVRk~~i~~L~ 387 (872)
+|+++++++.++.+.
T Consensus 229 ~G~l~~~~~~~~~~~ 243 (393)
T 1vjo_A 229 ASPFTMSSRAIEKLQ 243 (393)
T ss_dssp CEEEEECHHHHHHHH
T ss_pred eEEEEECHHHHHHHh
Confidence 999999987765553
No 22
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.92 E-value=6.6e-23 Score=219.28 Aligned_cols=216 Identities=10% Similarity=0.041 Sum_probs=172.2
Q ss_pred ccCCCC-ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 144 YLHLSP-KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 144 FP~L~~-~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
|+.+.. ..||...+-.++++.+++++.+ .+. .+..+.....++++|+.+++++|++++ ..|+||
T Consensus 6 ~~~~~~~~~~~~~pgp~~~~~~v~~a~~~-----------~~~---~~~~~~~~~~~~~~~~~la~~~~~~~~-~~v~~~ 70 (411)
T 3nnk_A 6 FSQLNPPSRLLMGPGPINADPRVLRAMSS-----------QLI---GQYDPAMTHYMNEVMALYRGVFRTENR-WTMLVD 70 (411)
T ss_dssp SCSCCCCCCEEESSSCCCCCHHHHHHHTS-----------CCC---CTTCHHHHHHHHHHHHHHHHHHTCCCS-EEEEEE
T ss_pred ccccCCccceeecCCCCCCCHHHHHHhhc-----------ccc---ccccHHHHHHHHHHHHHHHHHhCCCCC-cEEEEC
Confidence 555533 6788888888888888887532 110 122333346788999999999999854 358999
Q ss_pred CCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCc
Q 002866 223 VSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 223 snATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
.|+|+|+.+++.++ +++|++|++... .|.+.. +...++..|++++.+|++. ++.++.++|+++|... ++
T Consensus 71 ~sgt~al~~~~~~~-~~~gd~Vl~~~~-~~~~~~-~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~-------~~ 139 (411)
T 3nnk_A 71 GTSRAGIEAILVSA-IRPGDKVLVPVF-GRFGHL-LCEIARRCRAEVHTIEVPW-GEVFTPDQVEDAVKRI-------RP 139 (411)
T ss_dssp SCHHHHHHHHHHHH-CCTTCEEEEEEC-SHHHHH-HHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHH-------CC
T ss_pred CCcHHHHHHHHHHh-cCCCCEEEEecC-CchHHH-HHHHHHHcCCeEEEEecCC-CCCCCHHHHHHHHhhC-------CC
Confidence 99999999999988 789999887632 343322 4566778899999999975 5778999999999742 48
Q ss_pred eEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 303 GLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
++|++++.+|.||.++|++ +.+.|+++|+++++|++|..+. .++++...++|++++|+||++++ |.|+|+++++++
T Consensus 140 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~--~~~~~~~~~~d~~~~s~~K~l~~-~~g~g~~~~~~~ 216 (411)
T 3nnk_A 140 RLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGG--NPLETDVWGLDAVSAGMQKCLGG-PSGTSPITLSAR 216 (411)
T ss_dssp SEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTT--BCCCTTTTTCSEEECCSTTTTCC-CSSEEEEEECHH
T ss_pred eEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCC--cccchhccCCcEEEecCccccCC-CCceEEEEECHH
Confidence 8999999999999999997 5678899999999999998886 68899889999999999998665 789999999998
Q ss_pred CcccccC
Q 002866 382 VMGSLQN 388 (872)
Q Consensus 382 ~i~~L~P 388 (872)
.++.+.+
T Consensus 217 ~~~~~~~ 223 (411)
T 3nnk_A 217 MEEAIRR 223 (411)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 8766654
No 23
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.92 E-value=4.2e-24 Score=226.57 Aligned_cols=209 Identities=12% Similarity=0.154 Sum_probs=148.4
Q ss_pred CceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhcc--CcCcCCCchHHHHHHHHHHHHHhcCCCCCCCc-EEEeCCH
Q 002866 149 PKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSN--HALYGGAEKGTVEHDIKTRIMDHLNIPENEYG-LVFTVSR 225 (872)
Q Consensus 149 ~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~--~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~-VVFTsnA 225 (872)
..+|||++|.+++|+.+++++.+. + ......... ...+..+...+..+++|+++++++|++++ ++ |+||+|+
T Consensus 3 ~~~~l~~~~~~~~~~~v~~a~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~~~i~~t~g~ 77 (362)
T 2c0r_A 3 ERAYNFNAGPAALPLEVLERAQAE--F--VDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTG-YKVLFIQGGA 77 (362)
T ss_dssp CCCEECCSSSCCCCHHHHHHHHHT--S--SSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSS-EEEEEESSHH
T ss_pred cceeeccCCCCCCCHHHHHHHHHH--H--hhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCC-cEEEEECCCc
Confidence 468999999999999999885431 1 000000000 00001122345788999999999999653 24 5788999
Q ss_pred HHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC--C-CCccCHHHHHHHHhhhhccCCCCCc
Q 002866 226 GSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW--P-TLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 226 TeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~--p-~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
|+|+++++.++ +++||+|++... .|.+ ..+...++..| +++.++++. . ...++.++++ | +++|
T Consensus 78 t~a~~~~~~~l-~~~gd~vl~~~~-~~~~-~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i--------~~~t 143 (362)
T 2c0r_A 78 STQFAMIPMNF-LKEGQTANYVMT-GSWA-SKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--L--------QDNA 143 (362)
T ss_dssp HHHHHHHHHHH-CCTTCEEEEEEC-SHHH-HHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--C--------CTTE
T ss_pred hHHHHHHHHhc-CCCCCeEEEEec-CcHh-HHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--c--------CCCc
Confidence 99999999987 478999865421 2222 12345566679 999999862 1 1224554432 2 2369
Q ss_pred eEEEEeCccCcccch-hcHHHHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 303 GLFVFPVQSRVTGAK-YSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i-~PLe~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
++|++++.+|.||++ .|++.| +|+++++|++|..+. .++++.+. |++++|+||||| |.|+|+|+++++
T Consensus 144 ~~v~~~~~~n~tG~~~~~l~~i-----~~~~vivD~a~~~~~--~~~~~~~~--d~~~~s~~K~~g--~~G~G~l~~~~~ 212 (362)
T 2c0r_A 144 AYLHLTSNETIEGAQFKAFPDT-----GSVPLIGDMSSDILS--RPFDLNQF--GLVYAGAQKNLG--PSGVTVVIVRED 212 (362)
T ss_dssp EEEEEESEETTTTEECSSCCCC-----TTSCEEEECTTTTTS--SCCCGGGC--SEEEEETTTTTC--CSSCEEEEEEGG
T ss_pred CEEEEeCCcCccceeccccccc-----CCCEEEEEChhhccC--CccchhHC--cEEEEecccccc--CcCcEEEEEcHH
Confidence 999999999999996 677655 899999999999987 57887765 999999999998 789999999988
Q ss_pred Cccccc
Q 002866 382 VMGSLQ 387 (872)
Q Consensus 382 ~i~~L~ 387 (872)
.++.+.
T Consensus 213 ~~~~l~ 218 (362)
T 2c0r_A 213 LVAESP 218 (362)
T ss_dssp GSSSCC
T ss_pred HHhhcc
Confidence 766554
No 24
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.92 E-value=1.7e-23 Score=219.15 Aligned_cols=209 Identities=14% Similarity=0.190 Sum_probs=157.6
Q ss_pred eecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHH
Q 002866 151 VCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFK 230 (872)
Q Consensus 151 IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALn 230 (872)
.|+++.+-.++|+.+++++.+ .+...... ..+..+...+.++++|+.+++++|++. .+.|+||+|+|+|++
T Consensus 5 ~~~~~p~p~~~~~~v~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~-~~~v~~~~g~t~al~ 75 (362)
T 3ffr_A 5 KIYFTPGPSELYPTVRQHMIT-------ALDEKIGV-ISHRSKKFEEVYKTASDNLKTLLELPS-NYEVLFLASATEIWE 75 (362)
T ss_dssp CEEECSSSCCCCTTHHHHHHH-------HHHTTTTT-SCTTSHHHHHHHHHHHHHHHHHTTCCT-TEEEEEESCHHHHHH
T ss_pred ceeccCCCcCCCHHHHHHHHH-------HhcCCccC-cCCCCHHHHHHHHHHHHHHHHHhCCCC-CcEEEEeCCchHHHH
Confidence 577888888888888876432 12211100 011223334778999999999999963 236999999999999
Q ss_pred HHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCc
Q 002866 231 LLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQ 310 (872)
Q Consensus 231 LVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~v 310 (872)
+++.++. ++ +.+++...+ .+ ..+...++..|++++.++.+. +..++.++|+ + +++|++|.+++.
T Consensus 76 ~~~~~l~-~~-~~i~~~~~~--~~-~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~--~--------~~~~~~v~~~~~ 139 (362)
T 3ffr_A 76 RIIQNCV-EK-KSFHCVNGS--FS-KRFYEFAGELGREAYKEEAAF-GKGFYPADIT--V--------PADAEIICLTHN 139 (362)
T ss_dssp HHHHHHC-SS-EEEEEECSH--HH-HHHHHHHHHTTCEEEEEECCT-TCCCCGGGCC--C--------CTTCCEEEEESE
T ss_pred HHHHhcc-CC-cEEEEcCcH--HH-HHHHHHHHHhCCCeEEEecCC-CCCCCHHHHh--c--------cCCccEEEEEcC
Confidence 9999875 34 334444332 22 244556778899999999875 4678888886 2 236899999999
Q ss_pred cCcccchhcHHHH-HHHHHC-CcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 311 SRVTGAKYSYQWM-ALAQQN-HWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 311 SNvTG~i~PLe~I-~~Are~-G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+|.||.++|++.| +.|+++ |+++++|+++..+. .++++.. +|++++|+||+||+ |.|+|+++++++.++.+.+
T Consensus 140 ~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~--~~~~~~~--~d~~~~s~~K~~~~-~~G~g~~~~~~~~~~~~~~ 214 (362)
T 3ffr_A 140 ETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPY--PKFDWTK--IDSVFFSVQKCFGL-PAGLGVWILNDRVIEKSKA 214 (362)
T ss_dssp ETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTS--SCCCTTS--CSEEEEETTSTTCC-CSCCEEEEEEHHHHHHHHH
T ss_pred CCCcceeCCHHHHHHHHHhCCCCEEEEecccccCC--cccChhH--CcEEEEecccccCC-CCceEEEEECHHHHHHhhh
Confidence 9999999999854 578999 99999999999886 5777765 89999999999998 7899999999988777765
Q ss_pred C
Q 002866 389 Q 389 (872)
Q Consensus 389 ~ 389 (872)
.
T Consensus 215 ~ 215 (362)
T 3ffr_A 215 L 215 (362)
T ss_dssp H
T ss_pred c
Confidence 3
No 25
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=2.4e-23 Score=220.34 Aligned_cols=210 Identities=15% Similarity=0.069 Sum_probs=163.9
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCC--CCCcEEEeCCHHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPE--NEYGLVFTVSRGS 227 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~--dEY~VVFTsnATe 227 (872)
..|+.+.+..++++.+++++.+ .+ ..+++|.+...+.++|+.++++++... +...|+||+|+|+
T Consensus 5 ~~~~~~p~p~~~~~~v~~a~~~-----------~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~ 70 (385)
T 2bkw_A 5 VDTLLIPGPIILSGAVQKALDV-----------PS---LGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTL 70 (385)
T ss_dssp CCEECSSSSCCCCHHHHHTTSC-----------CC---CCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTH
T ss_pred cceeecCCCcCchHHHHHHHhc-----------cc---cccCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHH
Confidence 4567777777788888887532 11 123566655667789999999998741 1126999999999
Q ss_pred HHHHHHhhCC--CCCCCeEEEe-cccCchhHHHHHHHHHHcCcEEEEEec-cCCCCccCHHHHHHHHhhhhccCCCCCce
Q 002866 228 AFKLLAESYP--FHTNKKLLTM-FDYESQSVNWMAQSAKEKGAKVYSAWF-KWPTLKLCSTDLRKQISSKKRRKKDSAAG 303 (872)
Q Consensus 228 ALnLVaeslp--f~~Gd~ILT~-~DhEHnSVl~~~~~AkrkGaeV~~Vpv-d~p~g~Id~edLe~~I~~~~rr~~~~~T~ 303 (872)
|+.+++.++. |++|++|++. ..+.|.++ ...++..|++++.+++ +. ++.++.++|+++|... +++
T Consensus 71 al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~---~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~-------~~~ 139 (385)
T 2bkw_A 71 GWDIFASNFILSKAPNKNVLVVSTGTFSDRF---ADCLRSYGAQVDVVRPLKI-GESVPLELITEKLSQN-------SYG 139 (385)
T ss_dssp HHHHHHHHHSCTTCSCCEEEEECSSHHHHHH---HHHHHHTTCEEEEECCSST-TSCCCHHHHHHHHHHS-------CCS
T ss_pred HHHHHHHHHhccCCCCCeEEEEcCCcchHHH---HHHHHHcCCceEEEecCCC-CCCCCHHHHHHHHhcC-------CCC
Confidence 9999998864 4789998665 34445543 2445678999999998 65 5778999999998641 478
Q ss_pred EEEEeCccCcccchhcHHH-HHHHHHC--CcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeC
Q 002866 304 LFVFPVQSRVTGAKYSYQW-MALAQQN--HWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 304 LVa~p~vSNvTG~i~PLe~-I~~Are~--G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
+|++++.+|.||.++|++. ++.|+++ |+++++|++|..+. .++++..+++|++++|+||++++ |.|+|++++++
T Consensus 140 ~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~~-~~G~G~~~~~~ 216 (385)
T 2bkw_A 140 AVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGC--EEFEFDEWGVDFALTASQKAIGA-PAGLSISLCSS 216 (385)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTT--SCCCTTTTTCSEEEEESSSTTCC-CSCEEEEEECH
T ss_pred EEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCC--ccccccccCceEEEecCcccccc-CCcceEEEEcH
Confidence 9999999999999999984 5678999 99999999999886 57888888999999999998776 88999999988
Q ss_pred CCcc-ccc
Q 002866 381 SVMG-SLQ 387 (872)
Q Consensus 381 ~~i~-~L~ 387 (872)
+.++ .++
T Consensus 217 ~~~~~~l~ 224 (385)
T 2bkw_A 217 RFMDYALN 224 (385)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 7665 553
No 26
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.92 E-value=3.2e-23 Score=216.74 Aligned_cols=202 Identities=14% Similarity=0.043 Sum_probs=161.5
Q ss_pred ecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHH
Q 002866 152 CLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKL 231 (872)
Q Consensus 152 YLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnL 231 (872)
||.+++.+++|+.+++++.+ .+. .+..+.....+.++|+.+|+++|++++ .|+||+|+|+|+.+
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~-----------~~~---~~~~~~~~~~~~~l~~~la~~~g~~~~--~i~~~~g~t~a~~~ 66 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALAR-----------PQL---HHRTEAAREVFLKARGLLREAFRTEGE--VLILTGSGTLAMEA 66 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHS-----------CCC---CTTSHHHHHHHHHHHHHHHHHHTCSSE--EEEEESCHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhcc-----------CCC---CccCHHHHHHHHHHHHHHHHHhCCCCc--eEEEcCchHHHHHH
Confidence 89999999999999887543 111 111233345778999999999999764 59999999999999
Q ss_pred HHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCcc
Q 002866 232 LAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQS 311 (872)
Q Consensus 232 Vaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vS 311 (872)
++.++ +++|++|++.. .+|.+.. +...++..|++++.++++. ++.++.++|++ +++++|++++.+
T Consensus 67 ~~~~~-~~~gd~vl~~~-~~~~~~~-~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~-----------~~~~~v~~~~~~ 131 (352)
T 1iug_A 67 LVKNL-FAPGERVLVPV-YGKFSER-FYEIALEAGLVVERLDYPY-GDTPRPEDVAK-----------EGYAGLLLVHSE 131 (352)
T ss_dssp HHHHH-CCTTCEEEEEE-CSHHHHH-HHHHHHHTTCEEEEEECCT-TCCCCTTTSCC-----------SSCSEEEEESEE
T ss_pred HHHhc-cCCCCeEEEEe-CCchhHH-HHHHHHHcCCceEEEeCCC-CCCCCHHHHhc-----------cCCcEEEEEEec
Confidence 99987 67899988763 3456665 5566777899999999975 46677776643 257899999999
Q ss_pred CcccchhcHHH-HHHHHHC--CcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 312 RVTGAKYSYQW-MALAQQN--HWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 312 NvTG~i~PLe~-I~~Are~--G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
|.||.++|++. ++.|+++ |+++++|+++..|. .++++..+++|++++|+|||+++ |.|+|+++++++.++.++
T Consensus 132 nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~~-~~g~G~~~~~~~~~~~~~ 207 (352)
T 1iug_A 132 TSTGALADLPALARAFKEKNPEGLVGADMVTSLLV--GEVALEAMGVDAAASGSQKGLMC-PPGLGFVALSPRALERLK 207 (352)
T ss_dssp TTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTT--BCCCSGGGTCSEEEEESSSTTCC-CSCEEEEEECHHHHHTCC
T ss_pred CCcceecCHHHHHHHHHhhCCCCEEEEECCccccC--cceeccccCeeEEEecCcccccC-CCceeEEEECHHHHHHhh
Confidence 99999999984 5678999 99999999998876 57888778899999999997666 889999999887665553
No 27
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.92 E-value=2.8e-23 Score=221.52 Aligned_cols=216 Identities=11% Similarity=0.040 Sum_probs=171.9
Q ss_pred cccCCCC-ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 143 EYLHLSP-KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 143 EFP~L~~-~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
.||.|.. .+|+++.+..++++.+++++.+ .+. ..| ++.....+.++|+.||+++|++++ +.|+|
T Consensus 10 ~~~~~~~~~~~~~~~~p~~~~~~v~~a~~~-----------~~~--~~~-~~~~~~~~~~l~~~la~~~~~~~~-~~v~~ 74 (396)
T 2ch1_A 10 LRNPLIIPEKIMMGPGPSNCSKRVLTAMTN-----------TVL--SNF-HAELFRTMDEVKDGLRYIFQTENR-ATMCV 74 (396)
T ss_dssp GSSCCCCCCCBCCSSSSCCCCHHHHHHTTS-----------CCC--CTT-CHHHHHHHHHHHHHHHHHHTCCCS-CEEEE
T ss_pred cCCCCCCCcceeecCCCCCCCHHHHHHhcc-----------ccc--cCC-ChhHHHHHHHHHHHHHHHhCCCCC-cEEEE
Confidence 4877765 7889988888899988887533 111 112 333335688999999999999765 25999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSA 301 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~ 301 (872)
|+|+|+|+.+++.++ +++|++|++.. ..|.+. .+...++..|++++.++++. ++.++.++|+++|... +
T Consensus 75 ~~g~t~al~~~~~~~-~~~gd~vl~~~-~~~~~~-~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~-------~ 143 (396)
T 2ch1_A 75 SGSAHAGMEAMLSNL-LEEGDRVLIAV-NGIWAE-RAVEMSERYGADVRTIEGPP-DRPFSLETLARAIELH-------Q 143 (396)
T ss_dssp SSCHHHHHHHHHHHH-CCTTCEEEEEE-SSHHHH-HHHHHHHHTTCEEEEEECCT-TSCCCHHHHHHHHHHH-------C
T ss_pred CCcHHHHHHHHHHHh-cCCCCeEEEEc-CCcccH-HHHHHHHHcCCceEEecCCC-CCCCCHHHHHHHHHhC-------C
Confidence 999999999999987 57899987663 234444 23456777899999999976 5678999999998642 3
Q ss_pred ceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeC
Q 002866 302 AGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 302 T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
+++|++++.+|.||.++|++ +++.|+++|+++++|+++..|. .++++..+++|++++|+||++++ |.|+|++++++
T Consensus 144 ~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~--~~~~~~~~~~d~~~~s~~K~~~~-~~g~g~~~~~~ 220 (396)
T 2ch1_A 144 PKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCG--VPFYMDKWEIDAVYTGAQKVLGA-PPGITPISISP 220 (396)
T ss_dssp CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTT--BCCCTTTTTCCEEECCCC-CCCC-CSSCEEEEECH
T ss_pred CCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccC--CccchhhcCcCEEEEcCCccccC-CCCeEEEEECH
Confidence 78999999999999999997 5678899999999999998886 58888888999999999998777 78999999998
Q ss_pred CCccccc
Q 002866 381 SVMGSLQ 387 (872)
Q Consensus 381 ~~i~~L~ 387 (872)
+.++.+.
T Consensus 221 ~~~~~~~ 227 (396)
T 2ch1_A 221 KALDVIR 227 (396)
T ss_dssp HHHHHHH
T ss_pred HHHHhhh
Confidence 7766554
No 28
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.91 E-value=9.7e-23 Score=212.21 Aligned_cols=206 Identities=13% Similarity=0.026 Sum_probs=162.0
Q ss_pred ecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHH
Q 002866 152 CLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKL 231 (872)
Q Consensus 152 YLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnL 231 (872)
+|.+++.+++|+.+++++.+ .+.. +..+.....+.++|+.+++++|++.+.+.|+||+|+|+|+++
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~-----------~~~~---~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~ 67 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLR-----------PMRG---HLDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEA 67 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGS-----------CCCC---TTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhc-----------cccc---ccCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHH
Confidence 56678888899999887543 1111 122333467889999999999996323369999999999999
Q ss_pred HHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCcc
Q 002866 232 LAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQS 311 (872)
Q Consensus 232 Vaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vS 311 (872)
++.++. + ++|++. +.+|.+. .+...++..|++++.+|++. ++.++.++|+++|... ++++|++++.+
T Consensus 68 ~~~~~~-~--d~vl~~-~~~~~~~-~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~-------~~~~v~~~~~~ 134 (353)
T 2yrr_A 68 GLANLD-R--GPVLVL-VNGAFSQ-RVAEMAALHGLDPEVLDFPP-GEPVDPEAVARALKRR-------RYRMVALVHGE 134 (353)
T ss_dssp HHHTCS-C--CCEEEE-ECSHHHH-HHHHHHHHTTCCEEEEECCT-TSCCCHHHHHHHHHHS-------CCSEEEEESEE
T ss_pred HHHHhc-C--CcEEEE-cCCCchH-HHHHHHHHcCCceEEEeCCC-CCCCCHHHHHHHHHhC-------CCCEEEEEccC
Confidence 998874 3 677665 3345555 56666788899999999976 5678999999988641 47899999999
Q ss_pred CcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 312 RVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 312 NvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
|.||.++|++. ++.|+++|+++++|+++..+. .++++..+++|++++|+|||+++ |.|+|+++++++.++.++
T Consensus 135 nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~~-~~g~G~~~~~~~~~~~l~ 208 (353)
T 2yrr_A 135 TSTGVLNPAEAIGALAKEAGALFFLDAVTTLGM--LPFSMRAMGVDYAFTGSQKCLSA-PPGLAPIAASLEARKAFT 208 (353)
T ss_dssp TTTTEECCHHHHHHHHHHHTCEEEEECTTTTTT--SCCCHHHHTCSEEECCTTSTTCC-CSSCEEEEECHHHHHHCC
T ss_pred CCcceecCHHHHHHHHHHcCCeEEEEcCccccc--ccccccccCceEEEecCcccccC-CCceEEEEECHHHHHHhc
Confidence 99999999984 567899999999999998776 46777777899999999998766 789999999987765553
No 29
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.90 E-value=9.9e-22 Score=205.61 Aligned_cols=208 Identities=13% Similarity=0.030 Sum_probs=156.7
Q ss_pred ecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchH-HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHH
Q 002866 152 CLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKG-TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFK 230 (872)
Q Consensus 152 YLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~-~~ieeARerIA~lLgA~~dEY~VVFTsnATeALn 230 (872)
|+.+.+..+.|+.+++++.+. + .+..+... ..+.++|++||+++|.+.+...|+||+|+|+|+.
T Consensus 6 ~~~~~gp~~~~~~v~~a~~~~-----------~----~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~ 70 (366)
T 1m32_A 6 LLLTPGPLTTSRTVKEAMLFD-----------S----CTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVE 70 (366)
T ss_dssp EECSSSSCCCCHHHHHTTCCC-----------C----CTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHH
T ss_pred ccccCCCcCCCHHHHHHHhhh-----------h----cCCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHH
Confidence 444445555778888875331 0 01111112 4578899999999994221125999999999999
Q ss_pred HHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCc
Q 002866 231 LLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQ 310 (872)
Q Consensus 231 LVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~v 310 (872)
+++.++ .++|+++++.....|.+. +...++..|+++..+|++. .+.++.++|+++|... +++++|.+++.
T Consensus 71 ~~~~~~-~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~------~~~~~v~~~~~ 140 (366)
T 1m32_A 71 AVLGSA-LGPQDKVLIVSNGAYGAR--MVEMAGLMGIAHHAYDCGE-VARPDVQAIDAILNAD------PTISHIAMVHS 140 (366)
T ss_dssp HHHHHS-CCTTCCEEEEESSHHHHH--HHHHHHHHTCCEEEEECCT-TSCCCHHHHHHHHHHC------TTCCEEEEESE
T ss_pred HHHHHh-cCCCCeEEEEeCCCccHH--HHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhcC------CCeEEEEEecc
Confidence 999998 467888765533334432 2345566799999999875 5778999999999742 24789999999
Q ss_pred cCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 311 SRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 311 SNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
+|.||.++|++ +++.|+++|+++++|+++..+. .++++...++|++++|+||++++ |.|+|+++++++.++.+.
T Consensus 141 ~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~--~~~~~~~~~~di~~~s~~K~~~~-~~g~G~~~~~~~~~~~~~ 215 (366)
T 1m32_A 141 ETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGG--IPMDIAALHIDYLISSANKCIQG-VPGFAFVIAREQKLAACK 215 (366)
T ss_dssp ETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTT--SCCCTTTTTCSEEEEESSSTTCC-CSSEEEEEEEHHHHTTCT
T ss_pred cCCcceecCHHHHHHHHHHcCCEEEEECCccccC--cCccccccCccEEEecCcccccC-CCceEEEEECHHHHHhhc
Confidence 99999999997 4577899999999999999886 57888878899999999998866 889999999987665543
No 30
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.90 E-value=5.7e-22 Score=212.34 Aligned_cols=178 Identities=11% Similarity=0.121 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
.+.++++|+.+++++|++++. .++||.|+|+|+.+++.++ +++||+|++.. ..|.+.. +...++..|++++.+|++
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~-~~~~~~s~t~al~~~~~~l-~~~gd~Vl~~~-~~~~~~~-~~~~~~~~g~~~~~v~~~ 118 (416)
T 3isl_A 43 TGIMNETMEMLRELFQTKNRW-AYPIDGTSRAGIEAVLASV-IEPEDDVLIPI-YGRFGYL-LTEIAERYGANVHMLECE 118 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCCSE-EEEEESCHHHHHHHHHHHH-CCTTCEEEEEE-SSHHHHH-HHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCCc-EEEecCcHHHHHHHHHHHh-cCCCCEEEEec-CCcccHH-HHHHHHhcCCeeEEEecC
Confidence 467889999999999998653 3459999999999999988 78999988763 3344322 556677889999999998
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR 354 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~ 354 (872)
. ++.++.++|+++|... ++++|++++.+|.||.+.|++ +.+.|+++|+++++|++|+.|. .++++...+
T Consensus 119 ~-~~~~d~~~l~~~i~~~-------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~ 188 (416)
T 3isl_A 119 W-GTVFDPEDIIREIKKV-------KPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGG--CEVKVDEWK 188 (416)
T ss_dssp T-TCCCCHHHHHHHHHHH-------CCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTT--SCCCTTTTT
T ss_pred C-CCCCCHHHHHHHHhhC-------CCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccC--CCcchhhcC
Confidence 6 5688999999999732 479999999999999999997 4567899999999999999886 688998899
Q ss_pred CcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 355 PDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+|++++|+||++++ |.|+|+++++++.++.+.+
T Consensus 189 ~d~~~~s~~K~l~g-~~g~g~~~~~~~~~~~~~~ 221 (416)
T 3isl_A 189 IDAAIGGTQKCLSV-PSGMAPITYNERVADVIAA 221 (416)
T ss_dssp CSEEECCSSSTTCC-CSSEEEEEECHHHHHHHHT
T ss_pred CCEEEecCccccCC-CCCeEEEEECHHHHHHhhc
Confidence 99999999998655 8899999999998877765
No 31
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.90 E-value=7.7e-22 Score=208.89 Aligned_cols=210 Identities=14% Similarity=0.025 Sum_probs=167.2
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAF 229 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeAL 229 (872)
..||++.+-.++++.+++++.+. +. .+..+.......++|+.+++++|++.. +.|+||+|+|+|+
T Consensus 23 ~~~~~~p~p~~~~~~v~~a~~~~-----------~~---~~~~~~~~~~~~~l~~~la~~~~~~~~-~~v~~~~gg~~al 87 (393)
T 3kgw_A 23 TRLLLGPGPSNLAPRVLAAGSLR-----------MI---GHMQKEMLQIMEEIKQGIQYVFQTRNP-LTLVVSGSGHCAM 87 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTCC-----------CC---CTTSHHHHHHHHHHHHHHHHHHTCCCS-EEEEESCCTTTHH
T ss_pred cceeccCCCCCCCHHHHHHhccc-----------cc---CcccHHHHHHHHHHHHHHHHHhCCCCC-cEEEEeCCcHHHH
Confidence 45888888888999998875321 00 112233346778999999999999753 3699999999999
Q ss_pred HHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeC
Q 002866 230 KLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPV 309 (872)
Q Consensus 230 nLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~ 309 (872)
.+++.++ +++|++|++.. +.|-+. .+...++..|+++..+|++. ++.++.++|+++|... ++++|++++
T Consensus 88 ~~~~~~~-~~~gd~vl~~~-~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~-------~~~~v~~~~ 156 (393)
T 3kgw_A 88 ETALFNL-LEPGDSFLTGT-NGIWGM-RAAEIADRIGARVHQMIKKP-GEHYTLQEVEEGLAQH-------KPVLLFLVH 156 (393)
T ss_dssp HHHHHHH-CCTTCEEEEEE-SSHHHH-HHHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHH-------CCSEEEEES
T ss_pred HHHHHhc-CCCCCEEEEEe-CCchhH-HHHHHHHHcCCceEEEeCCC-CCCCCHHHHHHHHhhC-------CCcEEEEec
Confidence 9999988 78999987762 222111 24556777899999999976 4678999999999752 488999999
Q ss_pred ccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 310 QSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 310 vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
.+|.||.++|++ +.+.|+++|+++++|++|..|. .++++...++|++++|+||+|++ |.|+|+++++++.++.+.+
T Consensus 157 ~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~--~~~~~~~~~~d~~~~s~sK~~~~-~~g~g~~~~~~~~~~~~~~ 233 (393)
T 3kgw_A 157 GESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGG--VPIYMDQQGIDIMYSSSQKVLNA-PPGISLISFNDKAKYKVYS 233 (393)
T ss_dssp EETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTT--SCCCTTTTTCCEEEEESSSTTCC-CSSCEEEEECHHHHHHHHT
T ss_pred cCCcchhhccHHHHHHHHHHcCCEEEEECCccccC--cccchhhcCCCEEEecCcccccC-CCceeEEEECHHHHHHHhc
Confidence 999999999997 5678899999999999998775 58888888999999999998866 7899999999988776654
No 32
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.89 E-value=1.4e-21 Score=207.09 Aligned_cols=209 Identities=14% Similarity=0.110 Sum_probs=161.6
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE-eCCHHHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF-TVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF-TsnATeA 228 (872)
.+|+-+.+-.++|+.+++++.+. +. .+..+.....++++|+.+++++|++++ ++++| |+|+|+|
T Consensus 19 ~~~~~~pgp~~~~~~v~~a~~~~-----------~~---~~~~~~~~~~~~~~~~~la~~~g~~~~-~~~i~~~~ggt~a 83 (376)
T 3f0h_A 19 GMLNFTVGPVMSSEEVRAIGAEQ-----------VP---YFRTTEFSSTMLENEKFMLEYAKAPEG-SKAVFMTCSSTGS 83 (376)
T ss_dssp SCEECSSSSCCCCHHHHHHHTSC-----------CC---CCSSHHHHHHHHHHHHHHHHHHTCCTT-CEEEEESSCHHHH
T ss_pred CceeecCCCCCCcHHHHHHhcCC-----------CC---CCCCHHHHHHHHHHHHHHHHHhCCCCC-ceEEEEcCChhHH
Confidence 45666677788888888875431 11 112233346788999999999999754 34555 8999999
Q ss_pred HHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEe
Q 002866 229 FKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFP 308 (872)
Q Consensus 229 LnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p 308 (872)
+++++.++ .++||+|++.....+. ..+...+...|+++..++++. +..++.++|++++. +++++|+++
T Consensus 84 l~~~~~~~-~~~gd~vi~~~~~~~~--~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~~--------~~~~~v~~~ 151 (376)
T 3f0h_A 84 MEAVVMNC-FTKKDKVLVIDGGSFG--HRFVQLCEIHEIPYVALKLEH-GKKLTKEKLYEYDN--------QNFTGLLVN 151 (376)
T ss_dssp HHHHHHHH-CCTTCCEEEEESSHHH--HHHHHHHHHTTCCEEEEECCT-TCCCCHHHHHTTTT--------SCCCEEEEE
T ss_pred HHHHHHhc-cCCCCeEEEEeCChhh--HHHHHHHHHcCCceEEEeCCC-CCCCCHHHHHHhhc--------cCceEEEEe
Confidence 99999887 4789998766321122 123455677899999999875 46789998877543 368999999
Q ss_pred CccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 309 VQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 309 ~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
+.+|.||.++|++. .+.|+++|+++++|++|..+. .++++...++|++++|+||+||+ |.|+|+++++++.++.+.
T Consensus 152 ~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~--~~~~~~~~~~d~~~~s~~K~l~~-~~G~g~~~~~~~~~~~~~ 228 (376)
T 3f0h_A 152 VDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLA--DPFNMNECGADVMITGSQKVLAC-PPGISVIVLAPRGVERVE 228 (376)
T ss_dssp SEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTT--SCCCHHHHTCSEEEEETTTTTCC-CSSCEEEEECHHHHHHHH
T ss_pred cccCCcceecCHHHHHHHHHHcCCEEEEEcCccccC--ccccccccCccEEEecCcccccC-CCceEEEEECHHHHHHhh
Confidence 99999999999985 567899999999999999886 57888778899999999999997 789999999998776665
Q ss_pred C
Q 002866 388 N 388 (872)
Q Consensus 388 P 388 (872)
+
T Consensus 229 ~ 229 (376)
T 3f0h_A 229 K 229 (376)
T ss_dssp T
T ss_pred c
Confidence 4
No 33
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.87 E-value=4.2e-20 Score=206.99 Aligned_cols=228 Identities=14% Similarity=0.072 Sum_probs=162.1
Q ss_pred hHHHHHhhcccCC---CCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCC-CchHHHHHHHHHHHHHhc
Q 002866 135 KIDQLRANEYLHL---SPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGG-AEKGTVEHDIKTRIMDHL 210 (872)
Q Consensus 135 ~ID~lR~~EFP~L---~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygN-psS~~~ieeARerIA~lL 210 (872)
.++.+++.-.|.. ....||||.++++.++.+++++.. ... +. +...|+. |....+.+.+|+.+++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~~~~~-------~~~-n~-~~~~~~~~~~~~~le~~~~~~la~~~ 153 (497)
T 2qma_A 83 VIDDVAELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMI-------AAL-NQ-SMDSWDQASSATYVEQKVVNWLCDKY 153 (497)
T ss_dssp HHHHHHHHTTTTSCCTTSTTBCSSSCCCCBHHHHHHHHHH-------HHH-CC-CTTCGGGCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCeeEeCCCCCcHHHHHHHHHH-------Hhh-cc-cccchhhChHHHHHHHHHHHHHHHHh
Confidence 4566665444543 336899999999999999887532 111 21 1112332 333456667799999999
Q ss_pred CCCCCCCcEEEeCCHHHHHHHHHhhCC---------C---CC------CC-eEEEecccCchhHHHHHHHHHHcCc---E
Q 002866 211 NIPENEYGLVFTVSRGSAFKLLAESYP---------F---HT------NK-KLLTMFDYESQSVNWMAQSAKEKGA---K 268 (872)
Q Consensus 211 gA~~dEY~VVFTsnATeALnLVaeslp---------f---~~------Gd-~ILT~~DhEHnSVl~~~~~AkrkGa---e 268 (872)
|+++. ..++||+|+|+|+.+++.+.. | .+ |+ .|+++ +..|.++... ++..|. +
T Consensus 154 g~~~~-~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s-~~~h~s~~~~---~~~~g~g~~~ 228 (497)
T 2qma_A 154 DLSEK-ADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCS-KKSHFTVQKS---ASWMGLGEKA 228 (497)
T ss_dssp TCCTT-CEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEE-TTSCTHHHHH---HHHTTSCGGG
T ss_pred CCCCC-CCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEEC-CCchHHHHHH---HHHcCCCccc
Confidence 99752 369999999999988766521 1 12 35 45555 4466766533 333444 7
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
++.+|++. ++.++.++|+++|..... ...++.+|++++.+|.||.+.|++. .+.|+++|+++|||+|+.++. .+
T Consensus 229 v~~v~~~~-~~~~d~~~L~~~i~~~~~--~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~--~~ 303 (497)
T 2qma_A 229 VMTVDANA-DGTMDITKLDEVIAQAKA--EGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGAL--IL 303 (497)
T ss_dssp EEEECBCT-TSSBCGGGHHHHHHHHHH--TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGG--GG
T ss_pred EEEEecCC-CCcCCHHHHHHHHHHHHH--CCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHH--Hh
Confidence 99999975 688999999999975321 1112348999999999999999985 567899999999999998876 44
Q ss_pred CC----CCCC-CCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 348 LG----LSLF-RPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 348 LD----Ls~l-~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
.+ +..+ ++|++++|+|||++. |.|+|+|++++..
T Consensus 304 ~~~~~~~~gi~~~D~i~~s~hK~l~~-p~~~G~l~~~~~~ 342 (497)
T 2qma_A 304 SSHKSRLKGVERAHSISVDFHKLFYQ-TISCGALLVNDKS 342 (497)
T ss_dssp STTGGGGTTGGGCSEEEEETTTTTCC-CSSCEEEEESCGG
T ss_pred CcchHhhcCcccCCEEEEcchhccCC-CcceEEEEEeCHH
Confidence 44 3344 789999999999988 8999999998764
No 34
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.87 E-value=6.4e-21 Score=205.60 Aligned_cols=176 Identities=10% Similarity=0.041 Sum_probs=141.9
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcC--cEEEEE
Q 002866 195 KGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKG--AKVYSA 272 (872)
Q Consensus 195 S~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkG--aeV~~V 272 (872)
..+.++++|+.+++++|++ + .|+||+|+|+|+++++..+ .+|++||+... .|.+. .+...++..| +++..+
T Consensus 33 ~~~~~~~~~~~l~~~~~~~-~--~v~~~~sgt~a~~~~~~~~--~~gd~vi~~~~-~~~~~-~~~~~~~~~g~~~~~~~~ 105 (379)
T 3ke3_A 33 FQEVMNDLLSNLKTVYNAE-A--AVIIPGSGTYGMEAVARQL--TIDEDCLIIRN-GWFSY-RWTQILEKGKFAKSSTVL 105 (379)
T ss_dssp HHHHHHHHHHHHHHHHTCS-E--EEEEESCHHHHHHHHHHHH--CTTCEEEEEEC-SHHHH-HHHHHHHHHCCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCC-C--EEEEcCChhHHHHHHHHhC--CCCCeEEEEeC-CchhH-HHHHHHHHhCCCCceEEE
Confidence 3478899999999999997 3 6999999999999988765 58999876532 33333 3445556666 488888
Q ss_pred eccCCC--------CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc---HHH-HHHHHHCCcEEEeecccc
Q 002866 273 WFKWPT--------LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQW-MALAQQNHWHVLLDAGSL 340 (872)
Q Consensus 273 pvd~p~--------g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le~-I~~Are~G~~VLVDAAQ~ 340 (872)
++++.. ..++.++++++|... ++++|++++++|.||.++| ++. .+.|+++|+++++|++|+
T Consensus 106 ~~~~~g~~~~~~~~~~~d~~~l~~~i~~~-------~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~ 178 (379)
T 3ke3_A 106 TAERTEDTEAPKPFAPVDIETAVAKIKED-------KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS 178 (379)
T ss_dssp ECEESSCCSSCCCEECCCHHHHHHHHHHH-------TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred eccccccccccCCCCCCCHHHHHHHHhhc-------CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 875311 257999999998632 4789999999999999999 864 467899999999999998
Q ss_pred CCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 341 GPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 341 aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
|. .++++..+++|++++|+||++|+ |.|+|+|+++++.++.+.+
T Consensus 179 -g~--~~~~~~~~~~d~~~~s~~K~l~~-~~g~g~~~~~~~~~~~l~~ 222 (379)
T 3ke3_A 179 -GC--VWLDMKELGIDVLISAPQKGWSS-TPCAGLVMLSAAAIKKVES 222 (379)
T ss_dssp -TT--CCCCHHHHTCSEEEECTTTTTCS-CCCEEEEEECHHHHHHHHT
T ss_pred -CC--ccccccccCCCEEEecchhhcCC-CCceEEEEECHHHHHhhhc
Confidence 75 68898888999999999999988 8999999999988776654
No 35
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.87 E-value=2.8e-20 Score=209.91 Aligned_cols=211 Identities=15% Similarity=0.036 Sum_probs=155.0
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcC-CCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYG-GAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg-NpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
..||||..+++.|..++..+. ... .+.. ...|. .|...+++.++|+.+++++|++++ .++||+|+|+|
T Consensus 109 p~~~~~~~~~~~~~~~~~~~l-------~~~-~n~~-~~~~~~s~~~~~le~~~~~~la~l~g~~~~--~~~~t~ggtea 177 (515)
T 2jis_A 109 PRFFNQLFSGLDPHALAGRII-------TES-LNTS-QYTYEIAPVFVLMEEEVLRKLRALVGWSSG--DGIFCPGGSIS 177 (515)
T ss_dssp TTEESSSCCCCCHHHHHHHHH-------HHH-HCCC-TTCTTTCHHHHHHHHHHHHHHHHHHTCSSC--EEEEESSHHHH
T ss_pred CCeEEEeeCCCCHHHHHHHHH-------HHH-hccC-CCchhhchHHHHHHHHHHHHHHHHhCCCCC--CeEEcCCcHHH
Confidence 579999999988877765421 111 1110 00121 233346788899999999999854 69999999999
Q ss_pred HHHHHhhCC------CC-CCC------eEEEecccCchhHHHHHHHHHHcCc---EEEEEeccCCCCccCHHHHHHHHhh
Q 002866 229 FKLLAESYP------FH-TNK------KLLTMFDYESQSVNWMAQSAKEKGA---KVYSAWFKWPTLKLCSTDLRKQISS 292 (872)
Q Consensus 229 LnLVaeslp------f~-~Gd------~ILT~~DhEHnSVl~~~~~AkrkGa---eV~~Vpvd~p~g~Id~edLe~~I~~ 292 (872)
+.++..... ++ +|+ .|+++ +..|.++... ++..|+ +++.+|++. ++.++.++|+++|..
T Consensus 178 ~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s-~~~h~s~~~~---~~~~g~g~~~v~~v~~~~-~~~~d~~~L~~~i~~ 252 (515)
T 2jis_A 178 NMYAVNLARYQRYPDCKQRGLRTLPPLALFTS-KECHYSIQKG---AAFLGLGTDSVRVVKADE-RGKMVPEDLERQIGM 252 (515)
T ss_dssp HHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEE-TTSCTHHHHH---HHHTTSCGGGEEEECBCT-TSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHhhcCccccCCeEEEEC-CCccHHHHHH---HHHcCCCCCcEEEEecCC-CCcCCHHHHHHHHHH
Confidence 776655431 12 354 55555 4457776543 334465 899999975 688999999999975
Q ss_pred hhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCC-----CCCC-CCcEEEEccccc
Q 002866 293 KKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLG-----LSLF-RPDFIITSFYRV 365 (872)
Q Consensus 293 ~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLD-----Ls~l-~~DFlv~S~HK~ 365 (872)
... .+.++++|++++.+|.||.+.|++. .+.|+++|+++|||+++.++. .+.+ +..+ ++|++++|+|||
T Consensus 253 ~~~--~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~--~~~~~~~~~~~g~~~aD~v~~s~hK~ 328 (515)
T 2jis_A 253 AEA--EGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSV--LLSQTHRHLLDGIQRADSVAWNPHKL 328 (515)
T ss_dssp HHH--TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGG--GGCTTTGGGGTTGGGCSEEEECTTST
T ss_pred HHh--CCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHH--HhChhhHhhcCCCccCCEEEECcccc
Confidence 321 1224899999999999999999985 567899999999999998876 4444 4444 899999999999
Q ss_pred CCCCCCceEEEEEeCC
Q 002866 366 FGFDPTGFGCLLIKKS 381 (872)
Q Consensus 366 fG~~PtGvG~LyVRk~ 381 (872)
||+ |.|+|+|++|+.
T Consensus 329 l~~-p~g~G~l~~~~~ 343 (515)
T 2jis_A 329 LAA-GLQCSALLLQDT 343 (515)
T ss_dssp TCC-CSCCEEEEESCC
T ss_pred cCC-CCCeeEEEEeCh
Confidence 988 899999999987
No 36
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.86 E-value=1.4e-19 Score=203.00 Aligned_cols=215 Identities=14% Similarity=0.062 Sum_probs=151.4
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcC-CCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYG-GAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg-NpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
..||+|..+++.|..++..+.. .++..+. ..|. .|....+.+++++.+++++|++.+...++||+|+|+|
T Consensus 93 p~~~~~~~~~~~~~~~~~~~l~------~~~n~~~---~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea 163 (504)
T 2okj_A 93 PRFFNQLSTGLDIIGLAGEWLT------STANTNM---FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAIS 163 (504)
T ss_dssp TTEESSSSCCCCHHHHHHHHHH------HHHCCBS---SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHH
T ss_pred CCEEEEccCCCCHHHHHHHHHH------HhhccCC---CchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHH
Confidence 5699999888777665432210 0111110 1122 2323455677789999999997323369999999999
Q ss_pred HHHHHhhCCC-------CCC-----C-eEEEecccCchhHHHHHHHHHHcCc-EEEEEeccCCCCccCHHHHHHHHhhhh
Q 002866 229 FKLLAESYPF-------HTN-----K-KLLTMFDYESQSVNWMAQSAKEKGA-KVYSAWFKWPTLKLCSTDLRKQISSKK 294 (872)
Q Consensus 229 LnLVaeslpf-------~~G-----d-~ILT~~DhEHnSVl~~~~~AkrkGa-eV~~Vpvd~p~g~Id~edLe~~I~~~~ 294 (872)
+.+++.++.. ++| + .|+++ +..|.++......+. .|. +++.+|++. ++.++.++|+++|....
T Consensus 164 ~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s-~~~h~s~~~~~~~~g-~g~~~v~~v~~~~-~~~~d~~~L~~~i~~~~ 240 (504)
T 2okj_A 164 NMYSIMAARYKYFPEVKTKGMAAVPKLVLFTS-EQSHYSIKKAGAALG-FGTDNVILIKCNE-RGKIIPADFEAKILEAK 240 (504)
T ss_dssp HHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEE-TTSCTHHHHHHHHTT-SCGGGEEEECBCT-TSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHhhcCccccCCeEEEEC-CcchHHHHHHHHHcC-CCcccEEEEecCC-CCCCCHHHHHHHHHHHH
Confidence 9887766421 135 5 45554 456777654333221 243 899999975 68999999999997532
Q ss_pred ccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCcc-----CCCCCC-CCcEEEEcccccCC
Q 002866 295 RRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDS-----LGLSLF-RPDFIITSFYRVFG 367 (872)
Q Consensus 295 rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mip-----LDLs~l-~~DFlv~S~HK~fG 367 (872)
. ...++++|++++.+|.||.+.|++. .+.|+++|+++|||+|+.++. .. .++..+ ++|++++++|||||
T Consensus 241 ~--~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~--~~~~~~~~~~~g~~~~D~i~~~~hK~~~ 316 (504)
T 2okj_A 241 Q--KGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGL--LMSRKHRHKLNGIERANSVTWNPHKMMG 316 (504)
T ss_dssp H--TTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGG--GGCTTTGGGGTTGGGCSEEEECTTSTTC
T ss_pred H--CCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHH--HhCHhhHhhcCCcccCCEEEECchhhcC
Confidence 1 1224899999999999999999974 567899999999999988765 22 234433 79999999999999
Q ss_pred CCCCceEEEEEeCC
Q 002866 368 FDPTGFGCLLIKKS 381 (872)
Q Consensus 368 ~~PtGvG~LyVRk~ 381 (872)
. |.|+|+|++|+.
T Consensus 317 ~-p~~~g~l~~~~~ 329 (504)
T 2okj_A 317 V-LLQCSAILVKEK 329 (504)
T ss_dssp C-CSCCEEEEESST
T ss_pred C-CcceEEEEEECH
Confidence 8 899999999985
No 37
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.85 E-value=3e-19 Score=188.39 Aligned_cols=203 Identities=12% Similarity=-0.008 Sum_probs=153.0
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCc----hHHHHHHHHHHHHHhcCCCCCCCcEEEeCCH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAE----KGTVEHDIKTRIMDHLNIPENEYGLVFTVSR 225 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps----S~~~ieeARerIA~lLgA~~dEY~VVFTsnA 225 (872)
..||.++.+.+.| .+++++.+ .+. ..++++. ..+..+++|+.+++++|++++ .|+||+|+
T Consensus 32 ~~~~~~~~~~~~~-~v~~a~~~-----------~~~--~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~--~i~~~~gg 95 (397)
T 3f9t_A 32 GNIFGSMCSNVLP-ITRKIVDI-----------FLE--TNLGDPGLFKGTKLLEEKAVALLGSLLNNKDA--YGHIVSGG 95 (397)
T ss_dssp TCBCSCSCCCCCT-HHHHHHHH-----------HTT--CCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTC--EEEEESCH
T ss_pred CCeEEEecCCCcH-HHHHHHHH-----------HHh--hcCCCcccChhHHHHHHHHHHHHHHHhCCCCC--CEEEecCc
Confidence 3799988665544 56666432 111 1223332 246778999999999999876 59999999
Q ss_pred HHHHHHHHhhCCC------------CCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhh
Q 002866 226 GSAFKLLAESYPF------------HTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSK 293 (872)
Q Consensus 226 TeALnLVaeslpf------------~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~ 293 (872)
|+|+.+++..+.. .+|++|++.. ..|.++. ..++..|++++.+|++. ++.++.++|+++|...
T Consensus 96 t~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~-~~~~~~~---~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~ 170 (397)
T 3f9t_A 96 TEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPI-TAHFSFE---KGREMMDLEYIYAPIKE-DYTIDEKFVKDAVEDY 170 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEET-TCCTHHH---HHHHHHTCEEEEECBCT-TSSBCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECC-cchhHHH---HHHHHcCceeEEEeeCC-CCcCCHHHHHHHHhhc
Confidence 9999998877632 2478888764 3455443 44555799999999986 5788999999999741
Q ss_pred hccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCC---C---------CccCCCCCCCCcEEEE
Q 002866 294 KRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPK---D---------MDSLGLSLFRPDFIIT 360 (872)
Q Consensus 294 ~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~---~---------mipLDLs~l~~DFlv~ 360 (872)
++++|++.+.+|.||.+.|++ +++.|+++|+++++|.++..+. . ..++++.. ++|++++
T Consensus 171 -------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 242 (397)
T 3f9t_A 171 -------DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITI 242 (397)
T ss_dssp -------CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEEC
T ss_pred -------CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEE
Confidence 478999999999999999998 4567899999999999987432 0 01566666 8999999
Q ss_pred cccccCCCCCCceEEEEEeCCC
Q 002866 361 SFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 361 S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
|+||++++ |.++|++++++..
T Consensus 243 s~~K~~~~-~~~~g~~~~~~~~ 263 (397)
T 3f9t_A 243 DPHKMGHC-PIPSGGILFKDIG 263 (397)
T ss_dssp CTTTTTCC-CSSCEEEEESSGG
T ss_pred ccccccCC-CCCceEEEEeCHH
Confidence 99999876 7899999997764
No 38
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.85 E-value=1.1e-20 Score=199.15 Aligned_cols=207 Identities=15% Similarity=0.220 Sum_probs=148.1
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcC----CCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYG----GAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSR 225 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg----NpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnA 225 (872)
.+|+++++..++|+.+++++.+. . ... .+.. ...|+ .+.....++++|+.+++++|++. .+.|+||+|+
T Consensus 3 ~~~~~~~g~~~~p~~v~~a~~~~--~--~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-~~~v~~~~g~ 75 (360)
T 1w23_A 3 QVFNFNAGPSALPKPALERAQKE--L--LNF-NDTQ-MSVMELSHRSQSYEEVHEQAQNLLRELLQIPN-DYQILFLQGG 75 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHT--S--SSS-TTSS-SCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCT-TEEEEEESSH
T ss_pred ceEeecCCCcCCCHHHHHHHHHH--h--hhh-cccc-ccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-CceEEEECCc
Confidence 47999999999999999885431 0 000 0000 01111 22234578899999999999962 2369999999
Q ss_pred -HHHHHHHHhhCCC--CCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHH-HHhhhhccCCCCC
Q 002866 226 -GSAFKLLAESYPF--HTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRK-QISSKKRRKKDSA 301 (872)
Q Consensus 226 -TeALnLVaeslpf--~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~-~I~~~~rr~~~~~ 301 (872)
|+|+.+++.++.. ++|+.|++. .+.|.++ ..++..| +++.++++..++.++.++|++ +|. ++
T Consensus 76 gt~al~~~~~~l~~~~~~g~~vi~~-~~~~~~~----~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~--------~~ 141 (360)
T 1w23_A 76 ASLQFTMLPMNLLTKGTIGNYVLTG-SWSEKAL----KEAKLLG-ETHIAASTKANSYQSIPDFSEFQLN--------EN 141 (360)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEECS-HHHHHHH----HHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC--------TT
T ss_pred chHHHHHHHHHhcCCCCcccEEEec-chhHHHH----HHHHHhC-CeEEeecccccCcCCccchHhhccC--------CC
Confidence 9999998887643 234445543 3344432 2356679 999999864345567777765 442 36
Q ss_pred ceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 302 AGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 302 T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
|++|++++.+|.||.++| + | ++++|+++++|++|..+. .++++..+ |++++|+||+|| |.|+|+++++++
T Consensus 142 ~k~v~~~~~~nptG~~~~-~-i--~~~~~~~li~D~a~~~~~--~~~~~~~~--di~~~s~sK~~~--~~G~G~~~~~~~ 211 (360)
T 1w23_A 142 DAYLHITSNNTIYGTQYQ-N-F--PEINHAPLIADMSSDILS--RPLKVNQF--GMIYAGAQKNLG--PSGVTVVIVKKD 211 (360)
T ss_dssp EEEEEEESEETTTTEECS-S-C--CCCCSSCEEEECTTTTTS--SCCCGGGC--SEEEEETTTTTS--CTTCEEEEEEHH
T ss_pred CCEEEEeCCCCCcceecc-c-c--cccCCceEEEechhhcCC--CCcCcccC--CEEEEEcccccC--CCCcEEEEEcHH
Confidence 899999999999999998 2 2 237999999999999886 57777665 999999999998 679999999987
Q ss_pred Cccccc
Q 002866 382 VMGSLQ 387 (872)
Q Consensus 382 ~i~~L~ 387 (872)
.++.+.
T Consensus 212 ~~~~~~ 217 (360)
T 1w23_A 212 LLNTKV 217 (360)
T ss_dssp HHCSCC
T ss_pred HHhhcc
Confidence 765554
No 39
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.84 E-value=1e-18 Score=193.02 Aligned_cols=175 Identities=13% Similarity=-0.003 Sum_probs=135.7
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCC---CcEEEeCCHHHHHHHHHhhCCC-------CCC-----CeEEEecccCchhHHH
Q 002866 193 AEKGTVEHDIKTRIMDHLNIPENE---YGLVFTVSRGSAFKLLAESYPF-------HTN-----KKLLTMFDYESQSVNW 257 (872)
Q Consensus 193 psS~~~ieeARerIA~lLgA~~dE---Y~VVFTsnATeALnLVaeslpf-------~~G-----d~ILT~~DhEHnSVl~ 257 (872)
|...++.+++++.+++++|+++++ ..++||+|+|+|+.+++.++.. .+| ++||++ + .|.++.
T Consensus 77 ~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~-~-~h~~~~- 153 (452)
T 2dgk_A 77 PQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCG-P-VQICWH- 153 (452)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEES-S-CCHHHH-
T ss_pred hhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEC-C-CcHHHH-
Confidence 333467889999999999998642 2599999999999987665421 033 467766 4 676554
Q ss_pred HHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHC------C
Q 002866 258 MAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQN------H 330 (872)
Q Consensus 258 ~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~------G 330 (872)
..++..|++++.+|++..++.++.++|+++|.. +|++|++++.+|.||++.|++.| +.|+++ |
T Consensus 154 --~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~--------~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~ 223 (452)
T 2dgk_A 154 --KFARYWDVELREIPMRPGQLFMDPKRMIEACDE--------NTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGID 223 (452)
T ss_dssp --HHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCT--------TEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCC
T ss_pred --HHHHHcCceEEEEecCCCCCeECHHHHHHHHhh--------CCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCC
Confidence 445668999999999754578999999988853 48999999999999999999854 567874 9
Q ss_pred cEEEeeccccCCC-----CCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 331 WHVLLDAGSLGPK-----DMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 331 ~~VLVDAAQ~aG~-----~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
++++||+|+..+. ...++++...++|++++|+|||+++ |.|+|++++|+.
T Consensus 224 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~-~~~~G~~~~~~~ 278 (452)
T 2dgk_A 224 IDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLA-PLGCGWVIWRDE 278 (452)
T ss_dssp CCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCC-CSSCEEEEESSG
T ss_pred CcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCC-CCCeEEEEEcCH
Confidence 9999999987642 0124566556899999999998766 899999999864
No 40
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.84 E-value=2.6e-20 Score=196.50 Aligned_cols=215 Identities=13% Similarity=0.008 Sum_probs=163.9
Q ss_pred Cceeccc-CCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCC-----CchHHHHHHHHHH-HHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDY-CGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGG-----AEKGTVEHDIKTR-IMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDy-AAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygN-----psS~~~ieeARer-IA~lLgA~~dEY~VVF 221 (872)
.++|||+ ++.+++++.+++++.+. +.. ... ..+++ ......+.++|+. +++++|++ .|+|
T Consensus 8 ~~i~ld~~~~~~~~~~~v~~a~~~~-------~~~-~~~-~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~----~v~~ 74 (371)
T 2e7j_A 8 DFINIDPLQTGGKLTEEARQALLEW-------GDG-YSV-CDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD----VARV 74 (371)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC-----------------------------CCHHHHHHTHHHHHTTSS----EEEE
T ss_pred CcEEecccccCCCCCHHHHHHHHHH-------Hhh-ccc-CCccccccchhhHHHHHHHHHHHHHHHHcCCC----EEEE
Confidence 4899999 55888899998876431 111 000 00111 1112456789999 99999986 5999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe--ccCCCCccCHHHHHHHHhhhhccCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW--FKWPTLKLCSTDLRKQISSKKRRKKD 299 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp--vd~p~g~Id~edLe~~I~~~~rr~~~ 299 (872)
|+|+|+|+.+++.++ +++|++|++.. ..|.++... ++..|++++.+| ++. ++.++.++|+++|..... .
T Consensus 75 ~~g~t~a~~~~~~~~-~~~gd~vl~~~-~~~~~~~~~---~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~---~ 145 (371)
T 2e7j_A 75 TNGAREAKFAVMHSL-AKKDAWVVMDE-NCHYSSYVA---AERAGLNIALVPKTDYP-DYAITPENFAQTIEETKK---R 145 (371)
T ss_dssp ESSHHHHHHHHHHHH-CCTTCEEEEET-TCCHHHHHH---HHHTTCEEEEECCCCTT-TCCCCHHHHHHHHHHHTT---T
T ss_pred eCChHHHHHHHHHHH-hCCCCEEEEcc-CcchHHHHH---HHHcCCeEEEeecccCC-CCCcCHHHHHHHHHhhcc---c
Confidence 999999999999988 67899988763 345544433 566899999999 765 467899999999874310 1
Q ss_pred CCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 002866 300 SAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
+++++|++++.+|.||.++|++ +++.|+++|+++++|+++..+. .++++..+++|++++|+||++++ |.|+|++++
T Consensus 146 ~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~di~~~s~sK~~~~-~~~~G~~~~ 222 (371)
T 2e7j_A 146 GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGR--MPVSLKEIGADFIVGSGHKSMAA-SGPIGVMGM 222 (371)
T ss_dssp SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTT--BCCCHHHHTCSEEEEEHHHHSSC-CSSCEEEEE
T ss_pred CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCC--CCCChhhcCCCEEEecCCcCCCC-CCCcEEEEE
Confidence 3689999999999999999997 5577899999999999999886 46777777899999999998887 779999999
Q ss_pred eCCCccc-ccC
Q 002866 379 KKSVMGS-LQN 388 (872)
Q Consensus 379 Rk~~i~~-L~P 388 (872)
+++.++. +.+
T Consensus 223 ~~~~~~~~~~~ 233 (371)
T 2e7j_A 223 KEEWAEIVLRR 233 (371)
T ss_dssp CTTTTTTTTCB
T ss_pred echhhhhhccc
Confidence 9987776 654
No 41
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.83 E-value=1.4e-19 Score=199.16 Aligned_cols=167 Identities=14% Similarity=0.039 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHH---HHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEE
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRG---SAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYS 271 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnAT---eALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~ 271 (872)
.+.++++|+.+++++|++++ +|+||.|+| +++.+++ .+++|++|++.. ..|.++. .|+..++..|++++.
T Consensus 107 ~~~~~~~~~~la~~~g~~~~--~i~~~~g~taa~ea~~~a~---~~~~gd~Viv~~-~~h~s~~~~~~~~a~~~G~~v~~ 180 (438)
T 1wyu_A 107 LQATFEYQTMIAELAGLEIA--NASMYDGATALAEGVLLAL---RETGRMGVLVSQ-GVHPEYRAVLRAYLEAVGAKLLT 180 (438)
T ss_dssp HHHHHHHHHHHHHHHTSSEE--CSCBSSHHHHHHHHHHHHH---HHHTCCEEEEET-TSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhCCCcc--ceEEeCcHHHHHHHHHHHH---hcCCCCEEEEcC-ccCHhHHHHHHHHHHHCCCEEEE
Confidence 46789999999999999765 489999999 6665544 346789988763 4566664 556667778999999
Q ss_pred EeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeecc-ccCCCCCccCC
Q 002866 272 AWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAG-SLGPKDMDSLG 349 (872)
Q Consensus 272 Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAA-Q~aG~~mipLD 349 (872)
++.+ ++.++.++ |. ++|++|++++. |.||.+.|++ +++.||++|+++++|+. ++.|. ...+
T Consensus 181 v~~~--~~~~d~~~----i~--------~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~--~~~~ 243 (438)
T 1wyu_A 181 LPLE--GGRTPLPE----VG--------EEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGV--LKPP 243 (438)
T ss_dssp ECCB--TTBCCCCC----CC--------TTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGT--BCCH
T ss_pred EcCc--CCccCHHH----hC--------CCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccC--cCCC
Confidence 9873 35666554 32 35899999997 9999999997 55778999999997765 54553 2333
Q ss_pred CCCCCCcEEEEcccc-----cCCCCCCceEEEEEeCCCcccccC
Q 002866 350 LSLFRPDFIITSFYR-----VFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 350 Ls~l~~DFlv~S~HK-----~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
..+++|++++|+|| |+|+ | |+|+|+++++.+..+.+
T Consensus 244 -~~~g~D~~~~s~kk~~~~~~~~G-p-~~G~l~~~~~~~~~l~~ 284 (438)
T 1wyu_A 244 -GAYGADIAVGDGQSLGLPMGFGG-P-HFGFLATKKAFVRQLPG 284 (438)
T ss_dssp -HHHTCSEEEEECTTTTCCCGGGC-S-CCEEEEECGGGGGGCCS
T ss_pred -ccCCCCEEEECCcccCCCccCCC-C-CeeEEEEcHHHHHhCCC
Confidence 45789999999888 6677 8 99999999987776643
No 42
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.83 E-value=2.1e-19 Score=193.95 Aligned_cols=204 Identities=11% Similarity=0.061 Sum_probs=143.8
Q ss_pred CCceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE-eCCHH
Q 002866 148 SPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF-TVSRG 226 (872)
Q Consensus 148 ~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF-TsnAT 226 (872)
.+.+|+++++.+++|+.+++++.+ + ...+. ......|...+.++++|+.+++++|+++ .+.|+| |+|+|
T Consensus 38 ~~~~~~~~~~~~~~~~~v~~a~~~---~-----~~~~~-~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~~i~~~t~g~t 107 (398)
T 2fyf_A 38 KPRDGRFGSGPSKVRLEQLQTLTT---T-----AAALF-GTSHRQAPVKNLVGRVRSGLAELFSLPD-GYEVILGNGGAT 107 (398)
T ss_dssp SCSSCBCCSSSCCCCHHHHHGGGT---T-----TTTTT-TSCTTSHHHHHHHHHHHHHHHHHTTCCT-TCEEEEEETCHH
T ss_pred ccCCccccCCCCCCCHHHHHHHhh---c-----CCCcc-CcCcCCHHHHHHHHHHHHHHHHHhCCCC-CceEEEeCCchh
Confidence 446899999999999999987543 0 00000 0001123334578899999999999973 236999 99999
Q ss_pred HHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHc--CcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceE
Q 002866 227 SAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEK--GAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGL 304 (872)
Q Consensus 227 eALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~Akrk--GaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~L 304 (872)
+|+++++.++ +++| .+++.. .+|... +...+... |++++.+++++ +.+...+ + +++|++
T Consensus 108 ~al~~~~~~l-~~~g-v~~v~~-~~~~~~--~~~~~~~~~~g~~~~~v~~~~--g~~~~~~----i--------~~~~~~ 168 (398)
T 2fyf_A 108 AFWDAAAFGL-IDKR-SLHLTY-GEFSAK--FASAVSKNPFVGEPIIITSDP--GSAPEPQ----T--------DPSVDV 168 (398)
T ss_dssp HHHHHHHHHT-CSSC-EEEEEC-SHHHHH--HHHHHHHCTTSCCCEEEECCT--TCCCCCC----C--------CTTCSE
T ss_pred HHHHHHHHHh-cCCC-eEEEeC-CHHHHH--HHHHHHHhCCCCceEEEecCC--CCCCCcc----c--------cCCCCE
Confidence 9999999998 5565 222222 223222 12234555 88999999873 2222111 2 236899
Q ss_pred EEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcc
Q 002866 305 FVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 305 Va~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~ 384 (872)
|++++.+|.||+++|++.+... +|+++++|++|..+. .++++. ++|++++|+||+||. |.|+|+++++++.++
T Consensus 169 v~~~~~~nptG~~~~~~~i~~~--~~~~vivD~a~~~~~--~~~~~~--~~di~~~s~sK~~~~-~gg~g~l~~~~~~~~ 241 (398)
T 2fyf_A 169 IAWAHNETSTGVAVAVRRPEGS--DDALVVIDATSGAGG--LPVDIA--ETDAYYFAPQKNFAS-DGGLWLAIMSPAALS 241 (398)
T ss_dssp EEEESEETTTTEECCCCCCTTC--C-CEEEEECTTTTTT--SCCCGG--GCSEEEECTTSTTCS-CSSEEEEEECHHHHH
T ss_pred EEEeCcCCCcceecchHHhhhh--cCCeEEEEeccccCC--cccCcc--cCcEEEEecCcccCC-CCceEEEEECHHHHH
Confidence 9999999999999999865444 899999999999886 577775 489999999999996 557999999988766
Q ss_pred ccc
Q 002866 385 SLQ 387 (872)
Q Consensus 385 ~L~ 387 (872)
.++
T Consensus 242 ~l~ 244 (398)
T 2fyf_A 242 RIE 244 (398)
T ss_dssp HHH
T ss_pred Hhh
Confidence 553
No 43
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.83 E-value=3.6e-18 Score=193.02 Aligned_cols=208 Identities=13% Similarity=0.018 Sum_probs=151.3
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCC--CCC-CcEEEeCCHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIP--ENE-YGLVFTVSRG 226 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~--~dE-Y~VVFTsnAT 226 (872)
.++|....++++++.+.+++.+ .+..+.. .....|...++.+++++.+++++|++ +++ ..-+||+|+|
T Consensus 57 ~~~l~s~~t~~~~~~v~~~l~~-------~~~~~~~--~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggt 127 (502)
T 3hbx_A 57 RLNLASFVTTWMEPECDKLIMS-------SINKNYV--DMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSS 127 (502)
T ss_dssp GGBTTCCSCCCCCHHHHHHHHH-------TTTCBTT--CTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHH
T ss_pred CceeccccCCCCCHHHHHHHHH-------HhccCCC--ChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHH
Confidence 4455555567777777776432 1111110 01122334567788999999999998 433 2234799999
Q ss_pred HHHHHHHhhCC--CC-----CCC-----eEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhh
Q 002866 227 SAFKLLAESYP--FH-----TNK-----KLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKK 294 (872)
Q Consensus 227 eALnLVaeslp--f~-----~Gd-----~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~ 294 (872)
+|+.+++.++. |. +|+ +||++ +..|.++ .+.++..|++++.+|++..++.+++++|+++|..
T Consensus 128 ea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~-~~~h~s~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-- 201 (502)
T 3hbx_A 128 EAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTG-ANVQVCW---EKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDE-- 201 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEE-TTCCHHH---HHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCT--
T ss_pred HHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEc-CCchHHH---HHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhh--
Confidence 99998776542 21 254 67765 4456654 4556678999999999875588999999988853
Q ss_pred ccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHC------CcEEEeecccc-------CCCCCccCCCCCCCCcEEEE
Q 002866 295 RRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQN------HWHVLLDAGSL-------GPKDMDSLGLSLFRPDFIIT 360 (872)
Q Consensus 295 rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~------G~~VLVDAAQ~-------aG~~mipLDLs~l~~DFlv~ 360 (872)
+|++|++++.+|.||.+.|++.| +.|+++ |++++||+|++ .+. .+.++...++|++++
T Consensus 202 ------~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~--~~~~~~~~~~D~v~~ 273 (502)
T 3hbx_A 202 ------NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPE--LEWDFRLPLVKSINV 273 (502)
T ss_dssp ------TEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTT--CCCSTTSTTEEEEEE
T ss_pred ------CCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcc--cccccCCCCceEEEE
Confidence 58999999999999999999854 567888 99999999987 333 466676678999999
Q ss_pred cccccCCCCCCceEEEEEeCC
Q 002866 361 SFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 361 S~HK~fG~~PtGvG~LyVRk~ 381 (872)
++|||+++ |.|+|++++++.
T Consensus 274 s~hK~l~~-p~g~G~~~~~~~ 293 (502)
T 3hbx_A 274 SGHKYGLV-YAGIGWVIWRNK 293 (502)
T ss_dssp ETTTTTCC-CSSCEEEEESSG
T ss_pred CcccccCC-CCCeEEEEEeCH
Confidence 99999877 899999999864
No 44
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.82 E-value=9.6e-19 Score=191.27 Aligned_cols=162 Identities=9% Similarity=-0.010 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd 275 (872)
...+++|++|++++|++ .++||+|+|+|+++++.++ +++|++|++.. .+|.++. .+...++..|++++.++++
T Consensus 56 ~~~~~l~~~la~~~g~~----~~~~~~~gt~a~~~al~~l-~~~gd~vi~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~ 129 (412)
T 2cb1_A 56 PTAKALEERLKALEGAL----EAVVLASGQAATFAALLAL-LRPGDEVVAAK-GLFGQTIGLFGQVLSLMGVTVRYVDPE 129 (412)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHTT-CCTTCEEEEET-TCCHHHHHHHHHTTTTTTCEEEEECSS
T ss_pred hHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEeC-CCchhHHHHHHHHHHHcCCEEEEECCC
Confidence 56789999999999985 4999999999999999988 67899988764 3555543 4444456679999988753
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR 354 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~ 354 (872)
.++|+++|.. +|++|++++.+|+||.++|++. .+.|+++|+++++|++|..+. ...+.-..+
T Consensus 130 -------~~~l~~~i~~--------~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~--~~~~~~~~~ 192 (412)
T 2cb1_A 130 -------PEAVREALSA--------KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAG--ALCRPLAWG 192 (412)
T ss_dssp -------HHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTT--TSCCGGGGT
T ss_pred -------HHHHHHHhcc--------CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccc--ccCCccccC
Confidence 6778777742 5899999999999999999984 567899999999999998872 122223468
Q ss_pred CcEEEEcccccCCCCCCc-eEEEEEeCCC
Q 002866 355 PDFIITSFYRVFGFDPTG-FGCLLIKKSV 382 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtG-vG~LyVRk~~ 382 (872)
+|++++|+||+||+ |.+ +|++++.++.
T Consensus 193 ~di~~~S~~K~~~~-~~~~~G~~~~~~~~ 220 (412)
T 2cb1_A 193 AHVVVESLTKWASG-HGSVLGGAVLSRET 220 (412)
T ss_dssp CSEEEEETTTTTTC-SSCCCCEEEEECCC
T ss_pred CeEEEECCcccccC-CCCcEEEEEEeccc
Confidence 99999999999987 776 8999987743
No 45
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.80 E-value=1.7e-19 Score=202.64 Aligned_cols=206 Identities=10% Similarity=-0.008 Sum_probs=145.3
Q ss_pred CceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCc--CCCc---------hHHHHHHHHHHHHHhcCCCCCC-
Q 002866 149 PKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALY--GGAE---------KGTVEHDIKTRIMDHLNIPENE- 216 (872)
Q Consensus 149 ~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~y--gNps---------S~~~ieeARerIA~lLgA~~dE- 216 (872)
..+.|. ++.+++|+.|++++.+. +.+ .| |+|. ..+.++.+|+++++++|+++++
T Consensus 45 ~~i~L~-a~e~~~~~~V~eA~~~~-----------l~~--~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~ 110 (483)
T 1rv3_A 45 VGLELI-ASENFASRAVLEALGSC-----------LNN--KYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCW 110 (483)
T ss_dssp SSEECC-TTCCCCCHHHHHHHTSG-----------GGT--CCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTE
T ss_pred cCeEEE-cCCCCCCHHHHHHHHHH-----------Hhc--cCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccC
Confidence 356663 56678899999986431 111 12 3332 2356778999999999998654
Q ss_pred -CcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-HHH----HHHHcC--cEEEEEeccCCCCccCHHHHHH
Q 002866 217 -YGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-MAQ----SAKEKG--AKVYSAWFKWPTLKLCSTDLRK 288 (872)
Q Consensus 217 -Y~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~~~----~AkrkG--aeV~~Vpvd~p~g~Id~edLe~ 288 (872)
..|+||+|+ +|+..+..++ +++||+||+.. .+|.++.. +.. .++..| +++..++++..++.++.++|++
T Consensus 111 ~~~V~~~sGs-~an~~~~~al-l~pGD~Vl~~~-~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~ 187 (483)
T 1rv3_A 111 GVNVQPYSGS-PANFAVYTAL-VEPHGRIMGLD-LPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEE 187 (483)
T ss_dssp EEECCCSSHH-HHHHHHHHHH-TCTTCEEEEEC-GGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHH
T ss_pred ceEEEECCcH-HHHHHHHHHh-cCCCCEEEEec-CccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHH
Confidence 248888887 7777767777 68999988663 33444431 100 001113 4444444464467899999999
Q ss_pred HHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCC---CCcEEEEcccc
Q 002866 289 QISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLF---RPDFIITSFYR 364 (872)
Q Consensus 289 ~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l---~~DFlv~S~HK 364 (872)
++... +|++|++ +.+|.+ .++|++. .+.|+++|+++++|++|+.|. +..++... ++|++++|+||
T Consensus 188 ~i~~~-------~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~--~~~~~~~~p~~~~div~~s~~K 256 (483)
T 1rv3_A 188 NARLF-------HPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGL--VVAGVVPSPFEHCHVVTTTTHK 256 (483)
T ss_dssp HHHHH-------CCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHH--HHHTSSCCGGGTCSEEEEESSG
T ss_pred HHhhc-------CCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcc--cccCCCCCCCCCCcEEEecCcc
Confidence 99732 4889999 889988 9999985 567899999999999998764 34454444 78999999999
Q ss_pred cCCCCCCceEEEEEeCCCcc
Q 002866 365 VFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 365 ~fG~~PtGvG~LyVRk~~i~ 384 (872)
+|++ |.| |+++++++...
T Consensus 257 ~l~G-prg-G~i~~~~~~~~ 274 (483)
T 1rv3_A 257 TLRG-CRA-GMIFYRRGVRS 274 (483)
T ss_dssp GGCC-CSC-EEEEEECSBCC
T ss_pred cCCC-CCc-eEEEEcchhhh
Confidence 9877 999 99999987543
No 46
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.78 E-value=3.9e-17 Score=172.88 Aligned_cols=228 Identities=15% Similarity=0.122 Sum_probs=157.4
Q ss_pred HhhCCCCCCchhHHHHHhhcccCCCCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHH
Q 002866 124 LTMYPKYQSSDKIDQLRANEYLHLSPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDI 202 (872)
Q Consensus 124 L~~~p~y~~t~~ID~lR~~EFP~L~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeA 202 (872)
++..+.|.-+..+..+++ +|.. +..++|+.+.... .|+.+++++.+ .+. ..++.|. ....+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~-----------~~~--~~~~y~~--~~~~~l 72 (363)
T 3ffh_A 10 LAGLSSYKPGKREEEVMA-ELGL-TKITKLSSNENPLGTSKKVAAIQAN-----------SSV--ETEIYPD--GWASSL 72 (363)
T ss_dssp GTTCCC----CHHHHHHH-TTTC-SCCEECSSCSCTTCCCHHHHHHHHT-----------CBS--CCCBC------CHHH
T ss_pred HHhCCCCCCCCCHHHHHH-hcCC-CceEEccCCCCCCCCCHHHHHHHHH-----------HHH--HhhcCCC--cchHHH
Confidence 344455655556777765 4544 4689999875543 56777776432 111 1223333 245789
Q ss_pred HHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccC
Q 002866 203 KTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLC 282 (872)
Q Consensus 203 RerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id 282 (872)
|++||+++|++++ .|+||+|+|+|+++++.++ +++|++|++..- .|. .+...++..|++++.+|+++ ++.++
T Consensus 73 r~~la~~~~~~~~--~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~-~~~---~~~~~~~~~g~~~~~v~~~~-~~~~d 144 (363)
T 3ffh_A 73 RKEVADFYQLEEE--ELIFTAGVDELIELLTRVL-LDTTTNTVMATP-TFV---QYRQNALIEGAEVREIPLLQ-DGEHD 144 (363)
T ss_dssp HHHHHHHHTCCGG--GEEEESSHHHHHHHHHHHH-CSTTCEEEEEES-SCH---HHHHHHHHHTCEEEEEECCT-TSCCC
T ss_pred HHHHHHHhCCChh--hEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCC-ChH---HHHHHHHHcCCEEEEecCCC-CCCcC
Confidence 9999999999876 5999999999999999987 578999886632 233 34455677899999999986 57889
Q ss_pred HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHH-HHHHC--CcEEEeeccccC---CCCCccCCC-CCCCC
Q 002866 283 STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMA-LAQQN--HWHVLLDAGSLG---PKDMDSLGL-SLFRP 355 (872)
Q Consensus 283 ~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~-~Are~--G~~VLVDAAQ~a---G~~mipLDL-s~l~~ 355 (872)
.++|++++.. ++++|.+++.+|.||.++|++.+. .++.. |+++++|.+|.. ++....+.. ...+.
T Consensus 145 ~~~l~~~i~~--------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 216 (363)
T 3ffh_A 145 LEGMLNAIDE--------KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKN 216 (363)
T ss_dssp HHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTT
T ss_pred HHHHHHhccc--------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCC
Confidence 9999988752 589999999999999999998554 45555 999999999872 110001111 12345
Q ss_pred cEEEEcccccCCCCCCce--EEEEEeCCCcccc
Q 002866 356 DFIITSFYRVFGFDPTGF--GCLLIKKSVMGSL 386 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGv--G~LyVRk~~i~~L 386 (872)
++++.|++|+|| +.|+ |+++++++.++.+
T Consensus 217 ~i~~~s~sK~~g--~~G~r~G~~~~~~~~~~~l 247 (363)
T 3ffh_A 217 LIITRTFSKIYG--LASARVGYGIADKEIIRQL 247 (363)
T ss_dssp EEEEEESSSTTC--CSSCCCEEEEECHHHHHHH
T ss_pred EEEEeechhhhc--CchhceeeeecCHHHHHHH
Confidence 588899999998 4466 9999877665544
No 47
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.78 E-value=4.6e-17 Score=182.79 Aligned_cols=230 Identities=10% Similarity=-0.047 Sum_probs=151.6
Q ss_pred hHHHHHhhcccCCCC---ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCc-CCCchHHHHHHHHHHHHHhc
Q 002866 135 KIDQLRANEYLHLSP---KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALY-GGAEKGTVEHDIKTRIMDHL 210 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~---~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~y-gNpsS~~~ieeARerIA~lL 210 (872)
.++.+++.-.|.... .-|+.|-.+++.++..+..+.. ..+..+ ...| ..|....+.+++.+.+++++
T Consensus 56 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~------~~~n~~---~~~~~~~p~~~~lE~~v~~~l~~~~ 126 (475)
T 3k40_A 56 VMQDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLS------GAIACI---GFTWIASPACTELEVVMMDWLGKML 126 (475)
T ss_dssp HHHHHHHHTGGGCCCTTCTTBCCSSCCCCCHHHHHHHHHH------HHHCCC---SSSCCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCCCCcCceeeCCCCCcHHHHHHHHHH------HHhCcc---ccCccCCcHHHHHHHHHHHHHHHHh
Confidence 344455433344332 3477776555555554433211 111111 1122 23444577788999999999
Q ss_pred CCCCCC-------CcEEEeCCHHHHHHHHHhhCCC------------------CCCCeEEEecccCchhHHHHHHHHHHc
Q 002866 211 NIPENE-------YGLVFTVSRGSAFKLLAESYPF------------------HTNKKLLTMFDYESQSVNWMAQSAKEK 265 (872)
Q Consensus 211 gA~~dE-------Y~VVFTsnATeALnLVaeslpf------------------~~Gd~ILT~~DhEHnSVl~~~~~Akrk 265 (872)
|.+.+. ...+||+|+|+|+.+....... .++..|+++ +..|.++.. .++..
T Consensus 127 g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s-~~~H~s~~~---~~~~~ 202 (475)
T 3k40_A 127 ELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCS-DQAHSSVER---AGLLG 202 (475)
T ss_dssp TCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEE-TTSCHHHHH---HHHHH
T ss_pred CCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEEC-CCchHHHHH---HHHHc
Confidence 997531 2589999999996554333210 012345555 556777654 34456
Q ss_pred CcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCC
Q 002866 266 GAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKD 344 (872)
Q Consensus 266 GaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~ 344 (872)
|++++.+|++. ++ +++++|+++|...++ ....+.+|++++.++.||.+.|++. .+.|+++|+++|+|+|+.++.-
T Consensus 203 g~~~~~v~~d~-~~-~d~~~L~~~i~~~~~--~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~ 278 (475)
T 3k40_A 203 GVKLRSVQSEN-HR-MRGAALEKAIEQDVA--EGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAF 278 (475)
T ss_dssp TCEEEEECCBT-TB-CCHHHHHHHHHHHHH--TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGG
T ss_pred CCceEEEECCC-CC-cCHHHHHHHHHHHHH--CCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHH
Confidence 99999999986 57 999999999976432 1223678999999999999999985 5678999999999999877530
Q ss_pred C---ccCCCCC-CCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 345 M---DSLGLSL-FRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 345 m---ipLDLs~-l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
. ..-.+.. -.+|++++++|||++. |.|+|+|++|+..
T Consensus 279 ~~~~~~~~~~gi~~~Ds~~~~~hK~l~~-p~g~g~l~~~~~~ 319 (475)
T 3k40_A 279 ICPEYRHLMKGIESADSFNFNPHKWMLV-NFDCSAMWLKDPS 319 (475)
T ss_dssp GSGGGGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESSGG
T ss_pred hCHhhHHHhcCcccCCEEEECchhccCC-CCceEEEEEeCHH
Confidence 0 0001111 1469999999999988 9999999999863
No 48
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.78 E-value=5.4e-17 Score=180.84 Aligned_cols=229 Identities=11% Similarity=-0.007 Sum_probs=152.5
Q ss_pred hHHHHHhhcccCCCC---ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCc-CCCchHHHHHHHHHHHHHhc
Q 002866 135 KIDQLRANEYLHLSP---KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALY-GGAEKGTVEHDIKTRIMDHL 210 (872)
Q Consensus 135 ~ID~lR~~EFP~L~~---~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~y-gNpsS~~~ieeARerIA~lL 210 (872)
.++.+++.-.|.... ..||+|-.+++.+..++..+.. .++..+ ...| ..|....+.+++++.+++++
T Consensus 56 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------~~~n~~---~~~~~~~~~~~~le~~~~~~la~l~ 126 (486)
T 1js3_A 56 ILQDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLC------GAIGCI---GFSWAASPACTELETVMMDWLGKML 126 (486)
T ss_dssp HHHHHHHTTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHH------HHHCCC---CSSGGGCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCceEeCCCCCCHHHHHHHHHH------HHhCcC---ccccccChhHHHHHHHHHHHHHHHh
Confidence 345555533344432 3577777666655544332111 111111 1112 12333467778999999999
Q ss_pred CCCCC-------CCcEEEeCCHHHHHHHHHhhCC--CCC------CC--------e-EEEecccCchhHHHHHHHHHHcC
Q 002866 211 NIPEN-------EYGLVFTVSRGSAFKLLAESYP--FHT------NK--------K-LLTMFDYESQSVNWMAQSAKEKG 266 (872)
Q Consensus 211 gA~~d-------EY~VVFTsnATeALnLVaeslp--f~~------Gd--------~-ILT~~DhEHnSVl~~~~~AkrkG 266 (872)
|++.+ ...++||+|+|+|+.+...+.. +.+ |+ + ++...+..|.++. +.++..|
T Consensus 127 g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~---~~~~~~G 203 (486)
T 1js3_A 127 QLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVE---RAGLIGG 203 (486)
T ss_dssp TCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHH---HHHHHHT
T ss_pred CCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHH---HHHHhCC
Confidence 99752 1258999999999887664431 101 32 4 2333345666654 4456679
Q ss_pred cEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCC
Q 002866 267 AKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDM 345 (872)
Q Consensus 267 aeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~m 345 (872)
++++.+|++. ++.++.++|+++|...++ ......+|++++.+|.||++.|++. .+.|+++|+++|+|+|+.++.
T Consensus 204 ~~v~~v~~d~-~~~~d~~~L~~~i~~~~~--~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~-- 278 (486)
T 1js3_A 204 VKLKAIPSDG-KFAMRASALQEALERDKA--AGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSA-- 278 (486)
T ss_dssp CEEEEECCCT-TSCCCHHHHHHHHHHHHH--TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGG--
T ss_pred CceEEeecCC-CCCCCHHHHHHHHHHHHh--CCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHH--
Confidence 9999999975 689999999999976421 1111249999999999999999984 567899999999999987654
Q ss_pred ccC-CCCC-----CCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 346 DSL-GLSL-----FRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 346 ipL-DLs~-----l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
+.. ++.. .++|++++++|||++. |.|+|+|++|+.
T Consensus 279 ~~~~~~~~~~~g~~~adsi~~~~hK~~~~-p~~~G~l~~~~~ 319 (486)
T 1js3_A 279 FICPEFRHLLNGVEFADSFNFNPHKWLLV-NFDCSAMWVKRR 319 (486)
T ss_dssp GGSTTTGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESCH
T ss_pred HHCHHHHHHhcCccccCeeEEchhhhcCC-CcceEEEEEeCH
Confidence 222 2221 2689999999999998 899999999875
No 49
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.77 E-value=7.4e-18 Score=183.15 Aligned_cols=200 Identities=11% Similarity=-0.006 Sum_probs=137.6
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAF 229 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeAL 229 (872)
..-.||.++++..+.+.+++. +..+......|+. ......+++|++|++++|++ ..+++.++|+|+
T Consensus 28 ~~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~r-~~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~ 93 (398)
T 1gc0_A 28 LVPPVYQTATFTFPTVEYGAA---------CFAGEQAGHFYSR-ISNPTLNLLEARMASLEGGE----AGLALASGMGAI 93 (398)
T ss_dssp SSCCBCCCSCBCCC-------------------------------CCHHHHHHHHHHHHHHTCS----EEEEESSHHHHH
T ss_pred cCCCccCCCccccCCHHHHHH---------hhcCCcCCCcccC-CCChHHHHHHHHHHHHhCCC----cEEEECCHHHHH
Confidence 567899999987665554321 0011000001111 01246789999999999985 255566668999
Q ss_pred HHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEe
Q 002866 230 KLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFP 308 (872)
Q Consensus 230 nLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p 308 (872)
++++.++ +++|++|++... .|.++. .+...++..|+++..++.+ +.++|+++|.. ++++|.++
T Consensus 94 ~~~l~~~-~~~gd~vl~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~i~~--------~~~~v~~~ 157 (398)
T 1gc0_A 94 TSTLWTL-LRPGDEVLLGNT-LYGCTFAFLHHGIGEFGVKLRHVDMA------DLQALEAAMTP--------ATRVIYFE 157 (398)
T ss_dssp HHHHHHH-CCTTCEEEEESS-CCSHHHHHHHHTGGGGTCEEEEECTT------CHHHHHHHCCT--------TEEEEEEE
T ss_pred HHHHHHH-hcCCCEEEEeCC-CchhHHHHHHHHHHHcCCEEEEECCC------CHHHHHHhcCC--------CCeEEEEE
Confidence 9999887 578999887643 444454 3434446789999988753 57888877742 58999999
Q ss_pred CccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCc
Q 002866 309 VQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVM 383 (872)
Q Consensus 309 ~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i 383 (872)
..+|.||.++|++. .+.|+++|+++++|.++..+. ....+ .+++|+++.|+||+||+ |.+ .|+++++++.+
T Consensus 158 ~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~--~~~~~-~~~~d~~~~S~sK~~~~-~~~~~~G~l~~~~~~~ 231 (398)
T 1gc0_A 158 SPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPY--LQRPL-ELGADLVVHSATKYLSG-HGDITAGIVVGSQALV 231 (398)
T ss_dssp SSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHH--HCCGG-GGTCSEEEEETTTTTTC-SSSCCCEEEEECHHHH
T ss_pred CCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccc--cCCch-hhCceEEEECCccccCC-CCCCeEEEEEEChHHH
Confidence 99999999999985 567899999999999998765 22233 36899999999999997 665 58888876543
No 50
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.77 E-value=5.3e-18 Score=177.35 Aligned_cols=212 Identities=11% Similarity=0.025 Sum_probs=157.4
Q ss_pred CceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCC-CchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGG-AEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygN-psS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
.++|||+++.++.++.+++++.+ .+. .|.. .......+++++.+++++|++++ .|+||+|+|+
T Consensus 14 ~~i~l~~~~~~~~~~~v~~a~~~-----------~~~---~~~~~~g~~~~~~~~~~~l~~~~g~~~~--~v~~~~g~t~ 77 (359)
T 1svv_A 14 KPYSFVNDYSVGMHPKILDLMAR-----------DNM---TQHAGYGQDSHCAKAARLIGELLERPDA--DVHFISGGTQ 77 (359)
T ss_dssp -CEECSCSCSSCCCHHHHHHHHH-----------HTT---CCCCSTTCSHHHHHHHHHHHHHHTCTTS--EEEEESCHHH
T ss_pred eeEEecCCCcCCCCHHHHHHHHH-----------HHh---hccccccccHHHHHHHHHHHHHhCCCCc--cEEEeCCchH
Confidence 38999999999989988887532 111 1211 12236788999999999998765 5999999999
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVF 307 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~ 307 (872)
|+.+++..+ .++|++|++.. ..|.++... ..++..|+++..+|.+ ++.++.++|+++|..... ....++++|.+
T Consensus 78 a~~~~~~~~-~~~gd~vl~~~-~~~~~~~~~-~~~~~~g~~~~~v~~~--~~~~d~~~l~~~l~~~~~-~~~~~~~~v~~ 151 (359)
T 1svv_A 78 TNLIACSLA-LRPWEAVIATQ-LGHISTHET-GAIEATGHKVVTAPCP--DGKLRVADIESALHENRS-EHMVIPKLVYI 151 (359)
T ss_dssp HHHHHHHHH-CCTTEEEEEET-TSHHHHSST-THHHHTTCCEEEECCT--TSCCCHHHHHHHHHHSCS-TTSCEEEEEEE
T ss_pred HHHHHHHHH-hCCCCEEEEcc-cchHHHHHH-HHHhcCCCeeEEEeCC--CCeecHHHHHHHHHHHHh-ccCCCceEEEE
Confidence 999999987 46888887763 344444321 1246679999999986 567899999999875210 11234889999
Q ss_pred eCccCcccchhc---HH-HHHHHHHCCcEEEeeccc---cCCCCCccCCCCC----CCCcEEEEcccccCCCCCCceEEE
Q 002866 308 PVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGS---LGPKDMDSLGLSL----FRPDFIITSFYRVFGFDPTGFGCL 376 (872)
Q Consensus 308 p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ---~aG~~mipLDLs~----l~~DFlv~S~HK~fG~~PtGvG~L 376 (872)
++. |.||.++| ++ +++.|+++|+++++|.++ ..|. .+++... ..+|++++|+||+ |+ |.|+|+|
T Consensus 152 ~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~d~~~~s~~K~-g~-~~~~g~l 226 (359)
T 1svv_A 152 SNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSS--PVNDLTLADIARLTDMFYIGATKA-GG-MFGEALI 226 (359)
T ss_dssp ESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTS--TTCCCCHHHHHHHCSEEEEECTTT-TC-SSCEEEE
T ss_pred EcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcC--CCcchhhhhhhhcCCEEEEecccC-CC-CCceEEE
Confidence 998 67999999 55 456789999999999998 5554 3455443 3689999999998 55 8899999
Q ss_pred EEeCCCccccc
Q 002866 377 LIKKSVMGSLQ 387 (872)
Q Consensus 377 yVRk~~i~~L~ 387 (872)
+++++.++.+.
T Consensus 227 ~~~~~~~~~~~ 237 (359)
T 1svv_A 227 ILNDALKPNAR 237 (359)
T ss_dssp ECSGGGCTTHH
T ss_pred EEcccHHHHHH
Confidence 99888766554
No 51
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.75 E-value=1.9e-17 Score=176.56 Aligned_cols=160 Identities=13% Similarity=0.100 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..++++|+++|+++|++ .++||+|+|+|+++++.++.+++|++|++.. ..|.++.. .++..|++++.++++.
T Consensus 36 ~~~~~l~~~la~~~~~~----~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~-~~~~~~~~---~~~~~g~~~~~~~~~~ 107 (373)
T 3frk_A 36 DEDKKFEQEFADYCNVN----YCIGCGNGLDALHLILKGYDIGFGDEVIVPS-NTFIATAL---AVSYTGAKPIFVEPDI 107 (373)
T ss_dssp HHHHHHHHHHHHHHTSS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEET-TSCTHHHH---HHHHHSCEEEEECEET
T ss_pred chHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcCCCCcCEEEECC-CCcHHHHH---HHHHcCCEEEEEeccc
Confidence 46789999999999985 4999999999999999998778999988763 34555543 3456799999999985
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCC-
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR- 354 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~- 354 (872)
.++.++.++|+++|.. ++++|. .+|+||.+.|++. .+.|+++|+++++|++|+.|. .++....+
T Consensus 108 ~~~~~d~~~l~~~l~~--------~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~---~~~~~~~~~ 173 (373)
T 3frk_A 108 RTYNIDPSLIESAITE--------KTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGS---LYKGMKVGS 173 (373)
T ss_dssp TTTEECGGGTGGGCCT--------TEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTC---EETTEETTS
T ss_pred cccCcCHHHHHHhcCC--------CCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCC---EECCEeccc
Confidence 5678899988877642 577777 5789999999985 567899999999999999885 35666666
Q ss_pred -CcEEEEccc--ccCCCCCCce-EEEEEeC
Q 002866 355 -PDFIITSFY--RVFGFDPTGF-GCLLIKK 380 (872)
Q Consensus 355 -~DFlv~S~H--K~fG~~PtGv-G~LyVRk 380 (872)
+|++++|++ |++| |.|. |+++.++
T Consensus 174 ~~d~~~~S~~~~K~l~--~~g~gg~~~~~~ 201 (373)
T 3frk_A 174 LGDAAGFSFYPAKNLG--SLGDGGAVVTND 201 (373)
T ss_dssp SSSEEEEECCTTSSSC--CSSSCEEEEESC
T ss_pred cccEEEEeCcCCCccC--ccceeEEEEeCC
Confidence 899999955 9998 4344 4444443
No 52
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.75 E-value=1.6e-16 Score=168.47 Aligned_cols=207 Identities=11% Similarity=0.078 Sum_probs=146.8
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCC-CCCCCcEEEeCCHH
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNI-PENEYGLVFTVSRG 226 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA-~~dEY~VVFTsnAT 226 (872)
.+++|+.+.... .|+.+++++.+ .+... ....|+++. ..+.|++||+++|+ +++ .|+||+|+|
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~~~~--~~~~y~~~~----~~~l~~~la~~~g~~~~~--~i~~~~g~t 95 (367)
T 3euc_A 31 GLVKLDAMENPYRLPPALRSELAA-------RLGEV--ALNRYPVPS----SEALRAKLKEVMQVPAGM--EVLLGNGSD 95 (367)
T ss_dssp TCEECCSSCCCCCCCHHHHHHHHH-------HHHHH--HTTCSCCCC----HHHHHHHHHHHHTCCTTC--EEEEEEHHH
T ss_pred CeeEccCCCCCCCCCHHHHHHHHH-------Hhhhh--hhhcCCCCc----HHHHHHHHHHHhCCCCcc--eEEEcCCHH
Confidence 478998877543 56778777533 12211 112344432 46899999999999 444 699999999
Q ss_pred HHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEE
Q 002866 227 SAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFV 306 (872)
Q Consensus 227 eALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa 306 (872)
+|+++++.++ +++|++|++... .|... ...++..|+++..+|++. ++.++.++|+++|... ++++|.
T Consensus 96 ~a~~~~~~~~-~~~gd~Vl~~~~-~~~~~---~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~-------~~~~v~ 162 (367)
T 3euc_A 96 EIISMLALAA-ARPGAKVMAPVP-GFVMY---AMSAQFAGLEFVGVPLRA-DFTLDRGAMLAAMAEH-------QPAIVY 162 (367)
T ss_dssp HHHHHHHHHT-CCTTCEEEEEES-CSCCS---CHHHHTTTCEEEEEECCT-TSCCCHHHHHHHHHHH-------CCSEEE
T ss_pred HHHHHHHHHH-cCCCCEEEEcCC-CHHHH---HHHHHHcCCeEEEecCCC-CCCCCHHHHHHHhhcc-------CCCEEE
Confidence 9999999988 678999876532 22222 234566899999999986 5678999999999752 478999
Q ss_pred EeCccCcccchhcHHH----HHHHHHC--CcEEEeeccccC--CCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 002866 307 FPVQSRVTGAKYSYQW----MALAQQN--HWHVLLDAGSLG--PKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 307 ~p~vSNvTG~i~PLe~----I~~Are~--G~~VLVDAAQ~a--G~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
+++.+|.||+++|.+. ++.|+++ |+++++|.++.. +.. ..-.+...+.++++.|++|+ +.+..++|++++
T Consensus 163 ~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~ 240 (367)
T 3euc_A 163 LAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES-WMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAG 240 (367)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC-SGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEE
T ss_pred EcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc-hHHHHhhCCCEEEEecchhh-cccccCceeeee
Confidence 9999999999998753 3456889 999999999652 111 11133445677999999999 632334788887
Q ss_pred eCCCccc
Q 002866 379 KKSVMGS 385 (872)
Q Consensus 379 Rk~~i~~ 385 (872)
+++.++.
T Consensus 241 ~~~~~~~ 247 (367)
T 3euc_A 241 DPQWLEQ 247 (367)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 6554433
No 53
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.74 E-value=6.4e-17 Score=180.20 Aligned_cols=175 Identities=14% Similarity=0.056 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCC----CCC---CeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 196 GTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPF----HTN---KKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 196 ~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf----~~G---d~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.++..++++.+++++|++.+...++||+|+|+|+.+++.++.. ++| ++|++.. ..|.++ ...++..|++
T Consensus 106 ~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~-~~h~~~---~~~~~~~G~~ 181 (497)
T 3mc6_A 106 RKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPV-TAHAGF---DKAAYYFGMK 181 (497)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEET-TSCHHH---HHHHHHSCCE
T ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeC-CccHHH---HHHHHHcCCe
Confidence 4677789999999999983233699999999999998877521 023 6777663 345654 3445667999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCC----
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPK---- 343 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~---- 343 (872)
++.+|++..++.++.++|+++|.. ++++|++++.+|.||.+.|++. .+.|+++|+++++|+++.++.
T Consensus 182 ~~~v~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~ 253 (497)
T 3mc6_A 182 LRHVELDPTTYQVDLGKVKKFINK--------NTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFM 253 (497)
T ss_dssp EEEECBCTTTCSBCTTTTGGGCCS--------SEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGG
T ss_pred EEEEecCcccCcCCHHHHHHHHhh--------CCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhh
Confidence 999999864678899999877742 5899999999999999999984 567899999999999986321
Q ss_pred -----CCc-cCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCc
Q 002866 344 -----DMD-SLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVM 383 (872)
Q Consensus 344 -----~mi-pLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i 383 (872)
..+ +++....++|++++|+||++++ |.|+|++++++..+
T Consensus 254 ~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~-~~~~g~~~~~~~~~ 298 (497)
T 3mc6_A 254 EKAGYKNLPLLDFRVPGVTSISCDTHKYGFA-PKGSSVIMYRNSDL 298 (497)
T ss_dssp TTTTCCSCCCCSTTSTTCCEEEEETTTTTCC-CSSCEEEECSSHHH
T ss_pred hhhcccCCccccccCCCCcEEEECchhhcCC-CCCceeEEecCHHH
Confidence 112 4677778899999999999766 88999999887643
No 54
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.73 E-value=4.4e-17 Score=174.23 Aligned_cols=212 Identities=13% Similarity=0.038 Sum_probs=139.4
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhcc----CcCc-CCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCC
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSN----HALY-GGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVS 224 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~----~~~y-gNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsn 224 (872)
..++|+++.+++|+.+++++.+. +...... ...| +++....+.+.+|+.+++++|++++ ++|+.+
T Consensus 24 ~~~~~~~~~~~~~~~v~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~---~i~~~s 93 (405)
T 2vi8_A 24 AKIELIASENFVSRAVMEAQGSV-------LTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHA---NVQPHS 93 (405)
T ss_dssp HSEECCTTCCCCCHHHHHHHTSG-------GGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE---ECCCSS
T ss_pred cceeeccCcccCCHHHHHHHHHH-------hhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce---EEEecC
Confidence 35788888899999999886431 1100000 0001 2233334555699999999999743 555445
Q ss_pred HHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-HHH-HHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCc
Q 002866 225 RGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-MAQ-SAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 225 ATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~~~-~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
+|+|+.+++.++ +++|++|++.. ..|.+... +.. .....++++..++++..++.++.++|+++|... ++
T Consensus 94 Gt~a~~~a~~~~-~~~gd~Vl~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~-------~~ 164 (405)
T 2vi8_A 94 GAQANMAVYFTV-LEHGDTVLGMN-LSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLH-------RP 164 (405)
T ss_dssp HHHHHHHHHHHH-CCTTCEEEEEC-GGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHH-------CC
T ss_pred cHHHHHHHHHHh-cCCCCEEEEec-ccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhc-------CC
Confidence 599999999988 67899987663 23444421 110 011123477777765335678999999988642 36
Q ss_pred eEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCC---CCcEEEEcccccCCCCCCceEEEEE
Q 002866 303 GLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLF---RPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l---~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
++|.++. +..|...|++. .+.|+++|+++++|++|..|. ...+.... .+|++++|+||+||+ |.| |++++
T Consensus 165 ~~v~~~~--~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~--~~~~~~~~~~~~~di~~~s~sK~~~g-~~g-G~~~~ 238 (405)
T 2vi8_A 165 KLIVAAA--AAYPRIIDFAKFREIADEVGAYLMVDMAHIAGL--VAAGLHPNPVPYAHFVTTTTHKTLRG-PRG-GMILC 238 (405)
T ss_dssp SEEEECC--SSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHH--HHTTSSCCSTTTCSEEEEESSSTTCC-CSC-EEEEE
T ss_pred eEEEEeC--CCCCccCCHHHHHHHHHHcCCEEEEEccccccc--cccCcCCCccccCCEEEEeccccCCC-CCC-eEEEE
Confidence 7777732 33578888974 567899999999999987542 12222222 689999999999987 789 99998
Q ss_pred eCCCcccc
Q 002866 379 KKSVMGSL 386 (872)
Q Consensus 379 Rk~~i~~L 386 (872)
++++++.+
T Consensus 239 ~~~~~~~l 246 (405)
T 2vi8_A 239 QEQFAKQI 246 (405)
T ss_dssp CHHHHHHH
T ss_pred cHHHHHHH
Confidence 86654433
No 55
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.73 E-value=3.1e-16 Score=176.23 Aligned_cols=174 Identities=11% Similarity=0.030 Sum_probs=136.4
Q ss_pred hHHHHHHHHHHHHHhcCCCC--CCCcEEEeCCHHHHHHHHHhhCCCCCC--------CeEEEecccCchhHHHHHHHHHH
Q 002866 195 KGTVEHDIKTRIMDHLNIPE--NEYGLVFTVSRGSAFKLLAESYPFHTN--------KKLLTMFDYESQSVNWMAQSAKE 264 (872)
Q Consensus 195 S~~~ieeARerIA~lLgA~~--dEY~VVFTsnATeALnLVaeslpf~~G--------d~ILT~~DhEHnSVl~~~~~Akr 264 (872)
......++++.+++++|+++ +....+||+|+|+|+.+++..+. .+| ++|++.. ..|.++ ...++.
T Consensus 137 ~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~-~~g~~~~g~~~d~Vi~~~-~~~~~~---~~~~~~ 211 (514)
T 3mad_A 137 TAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYR-DWARATKGITAPEAVVPV-SAHAAF---DKAAQY 211 (514)
T ss_dssp HHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHH-HHHHHHHCCSSCEEEEET-TSCTHH---HHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHH-HHhhhhcCCCCCeEEEeC-ccchHH---HHHHHH
Confidence 34666788899999999974 33223999999999999888763 222 7777663 345544 344566
Q ss_pred cCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCC-
Q 002866 265 KGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGP- 342 (872)
Q Consensus 265 kGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG- 342 (872)
.|++++.+|++. ++.++.++|+++|.. ++++|++++.+|.||.+.|++. .+.|+++|+++++|+++..+
T Consensus 212 ~G~~v~~v~~~~-~~~~d~~~Le~~i~~--------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~ 282 (514)
T 3mad_A 212 FGIKLVRTPLDA-DYRADVAAMREAITP--------NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFI 282 (514)
T ss_dssp HTCEEEEECBCT-TSCBCHHHHHHHCCT--------TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred cCCeeEEeeeCC-CCCCCHHHHHHHhcc--------CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEeccccccc
Confidence 799999999987 688999999988853 5899999999999999999984 56789999999999996532
Q ss_pred --------CCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCc
Q 002866 343 --------KDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVM 383 (872)
Q Consensus 343 --------~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i 383 (872)
....+++....++|++++|+||++++ |.|+|++++++..+
T Consensus 283 ~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~-~~~~g~~~~~~~~~ 330 (514)
T 3mad_A 283 LPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYG-AKGTSVILYRRPDL 330 (514)
T ss_dssp HHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCC-CSSCEEEEESSHHH
T ss_pred chhHHhcCCCCCcccccCCCCcEEEECchhccCC-CCCeEEEEEeCHHH
Confidence 21125677778999999999999666 88999999988654
No 56
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.72 E-value=7.8e-16 Score=172.68 Aligned_cols=182 Identities=12% Similarity=0.002 Sum_probs=132.3
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCC--------CcEEEeCCHHHHHHHHHhhCC-----------C-------CCCCeEEE
Q 002866 193 AEKGTVEHDIKTRIMDHLNIPENE--------YGLVFTVSRGSAFKLLAESYP-----------F-------HTNKKLLT 246 (872)
Q Consensus 193 psS~~~ieeARerIA~lLgA~~dE--------Y~VVFTsnATeALnLVaeslp-----------f-------~~Gd~ILT 246 (872)
|...++..++.+.+++++|.+... -..+||+|+|+|+.+...... + .++..|++
T Consensus 114 p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~ 193 (481)
T 4e1o_A 114 PACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYA 193 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEE
Confidence 444567778888899999997532 157999999999765443321 0 12345555
Q ss_pred ecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHH
Q 002866 247 MFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MAL 325 (872)
Q Consensus 247 ~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~ 325 (872)
+ +..|.++... ++-.|++++.+|+++ ++.+++++|+++|...+. ....+.+|++++.++.||.+.|++. .+.
T Consensus 194 s-~~~H~s~~~~---~~~~g~~~~~v~~~~-~~~~d~~~Le~~i~~~~~--~g~~~~~vv~~~~~t~~G~id~l~~I~~l 266 (481)
T 4e1o_A 194 S-DQAHSSVEKA---GLISLVKMKFLPVDD-NFSLRGEALQKAIEEDKQ--RGLVPVFVCATLGTTGVCAFDCLSELGPI 266 (481)
T ss_dssp E-TTSCHHHHHH---HHHHTCEEEEECCCT-TSCCCHHHHHHHHHHHHH--TTCEEEEEEEEBSCTTTCCBCCHHHHHHH
T ss_pred c-CcchHHHHHH---HHhCCCceEEEEcCC-CCcCCHHHHHHHHHHHHh--CCCCcEEEEEecCCCCCcCcCCHHHHHHH
Confidence 5 5567776543 344699999999975 689999999999975422 1223678999999999999999985 567
Q ss_pred HHHCCcEEEeeccccCCCCCc-cCC--CCC-CCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 326 AQQNHWHVLLDAGSLGPKDMD-SLG--LSL-FRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 326 Are~G~~VLVDAAQ~aG~~mi-pLD--Ls~-l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
|+++|+++|||||+.++.-.. ... +.. -.+|++++++|||++. |.|+|+|++++..
T Consensus 267 a~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p~g~g~l~~~~~~ 326 (481)
T 4e1o_A 267 CAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMV-HFDCTGFWVKDKY 326 (481)
T ss_dssp HHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESBHH
T ss_pred HHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCC-CCceEEEEEeCHH
Confidence 899999999999987652000 010 111 1359999999999998 9999999998863
No 57
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.71 E-value=6.7e-17 Score=173.67 Aligned_cols=218 Identities=13% Similarity=0.108 Sum_probs=140.1
Q ss_pred CCCchhHHHHHhhcccCCC-------C---ceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhcc-C---cCcCCCc
Q 002866 130 YQSSDKIDQLRANEYLHLS-------P---KVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSN-H---ALYGGAE 194 (872)
Q Consensus 130 y~~t~~ID~lR~~EFP~L~-------~---~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~-~---~~ygNps 194 (872)
|..-.++..+|+ +||.+. + ..|++++..+. .++.+++++.+ .+.....+ + ..|+
T Consensus 20 ~~~~~~~~~~~~-~fp~~~~~~~~~~g~~~i~~~~~~~~~~~~~p~v~~a~~~-------~~~~~~~~~~~~~~~~~--- 88 (401)
T 2bwn_A 20 YRTFIDIEREKG-AFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHE-------ALEAVGAGSGGTRNISG--- 88 (401)
T ss_dssp CCCCCEEEECTT-STTEEEEECTTSCEEEEEECSCSCTTSGGGCHHHHHHHHH-------HHHHHCSCCCSBTTTBC---
T ss_pred ceehhhhhcccc-cccceecccccCCCCcEEEeeCCCcccCCCCHHHHHHHHH-------HHHHcCCCCCCcCcccC---
Confidence 443334556675 699874 1 34776655442 34567777543 12111000 0 0111
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 195 KGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 195 S~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
......++|++||+++|++ + .|+||+|++ ++..+...+ .+.+|+.|++.. ..|.++.. .++..|++++.+|
T Consensus 89 ~~~~~~~l~~~la~~~~~~-~--~i~~~sG~~-a~~~~~~~l~~~~~gd~Vl~~~-~~~~~~~~---~~~~~g~~~~~v~ 160 (401)
T 2bwn_A 89 TTAYHRRLEAEIAGLHQKE-A--ALVFSSAYN-ANDATLSTLRVLFPGLIIYSDS-LNHASMIE---GIKRNAGPKRIFR 160 (401)
T ss_dssp CBHHHHHHHHHHHHHTTCS-E--EEEESCHHH-HHHHHHHHHHHHSTTCEEEEET-TCCHHHHH---HHHHSCCCEEEEC
T ss_pred ChHHHHHHHHHHHHHhCCC-c--EEEECCcHH-HHHHHHHHHhcCCCCCEEEECc-hhhHHHHH---HHHHcCCeEEEEc
Confidence 1256789999999999973 2 589988877 544443333 235788887663 35665543 2355799999888
Q ss_pred ccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccC--CC
Q 002866 274 FKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSL--GL 350 (872)
Q Consensus 274 vd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipL--DL 350 (872)
.+ +.++|++++... ..+++++|++++.+|.||.++|++ +++.|+++|+++++|++|..|.- -+- .+
T Consensus 161 ~~------d~~~le~~l~~~----~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~-~~~g~~~ 229 (401)
T 2bwn_A 161 HN------DVAHLRELIAAD----DPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMY-GPRGAGV 229 (401)
T ss_dssp TT------CHHHHHHHHHHS----CTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTS-STTSCCH
T ss_pred CC------CHHHHHHHHHhh----ccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEecccccccc-CCCCcee
Confidence 64 578898888642 113689999999999999999997 55788999999999999985420 010 00
Q ss_pred ---CC--CCCcEEEEcccccCCCCCCceEEEEEeC
Q 002866 351 ---SL--FRPDFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 351 ---s~--l~~DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
.. -++|.++.|+.|.||. .| |+++.++
T Consensus 230 ~~~~~~~~~~~i~~~s~sK~~~~--~G-G~~~~~~ 261 (401)
T 2bwn_A 230 AERDGLMHRIDIFNGTLAKAYGV--FG-GYIAASA 261 (401)
T ss_dssp HHHHTCGGGCSEEEEESSSTTCS--CC-EEEEECH
T ss_pred eeccCccccCcEEEeechhhccC--CC-CEEecCH
Confidence 11 1468999999999994 35 6665543
No 58
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.69 E-value=2.7e-16 Score=166.50 Aligned_cols=228 Identities=13% Similarity=0.155 Sum_probs=161.4
Q ss_pred hhCCCCCCchhHHHHHhhcccCCCCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHH
Q 002866 125 TMYPKYQSSDKIDQLRANEYLHLSPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIK 203 (872)
Q Consensus 125 ~~~p~y~~t~~ID~lR~~EFP~L~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeAR 203 (872)
...+.|.....+..+++ .|.. +.+++|+.+.... .|+.+++++.+ .+.....|.++.. .+.|
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~-----------~~~~~~~y~~~~~----~~lr 71 (365)
T 3get_A 9 NNLSNYEPGKDIEVIAK-EYGV-KEVIKLASNENPFGTPPKAIECLRQ-----------NANKAHLYPDDSM----IELK 71 (365)
T ss_dssp GGSCCCCCCCCHHHHHH-HTTC-SCCEECSSCCCTTCSCHHHHHHHHH-----------HGGGTTSCCCTTC----HHHH
T ss_pred hhcCCCCCCCCHHHHHH-hcCC-CceEEecCCCCCCCCCHHHHHHHHH-----------HHHhhccCCCCCh----HHHH
Confidence 34445555556777765 4655 5689999875553 66778776532 1111123433321 5899
Q ss_pred HHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCH
Q 002866 204 TRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCS 283 (872)
Q Consensus 204 erIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~ 283 (872)
++||+++|++++ .|+||+|+|+|+++++.++ +++|++|++.. ..|. .+...++..|+++..+|++..++ ++.
T Consensus 72 ~~la~~~~~~~~--~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~-~~~~---~~~~~~~~~g~~~~~v~~~~~~~-~d~ 143 (365)
T 3get_A 72 STLAQKYKVQNE--NIIIGAGSDQVIEFAIHSK-LNSKNAFLQAG-VTFA---MYEIYAKQCGAKCYKTQSITHNL-DEF 143 (365)
T ss_dssp HHHHHHHTCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEECS-SCCT---HHHHHHHHHTCEEEECSSSSCCH-HHH
T ss_pred HHHHHHhCCCcc--eEEECCCHHHHHHHHHHHH-hCCCCEEEEeC-CChH---HHHHHHHHcCCEEEEEecCCCCC-CCH
Confidence 999999999776 5999999999999999987 57899988763 2333 33445667899999998822356 888
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHH--HCCcEEEeecccc------CCCCCccCCC----
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQ--QNHWHVLLDAGSL------GPKDMDSLGL---- 350 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Ar--e~G~~VLVDAAQ~------aG~~mipLDL---- 350 (872)
++|++++. +++++|.+++.+|.||.++|++.+ +.++ ++|+++++|.++. .+. .+.+.
T Consensus 144 ~~l~~~l~--------~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~ 213 (365)
T 3get_A 144 KKLYETHK--------DEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSK--KHLEPCELI 213 (365)
T ss_dssp HHHHHHTT--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGG--GCCCHHHHH
T ss_pred HHHHHHhC--------CCCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCc--ccccHhHHh
Confidence 88888775 258999999999999999999854 3445 5799999999987 332 12222
Q ss_pred CCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 351 SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
...+.++++.|++|+||.+..++|+++++++.++.+.
T Consensus 214 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 250 (365)
T 3get_A 214 KEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFY 250 (365)
T ss_dssp HHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHH
T ss_pred ccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHH
Confidence 1246789999999999832345899998777666554
No 59
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.68 E-value=5.2e-17 Score=170.14 Aligned_cols=166 Identities=10% Similarity=0.054 Sum_probs=129.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccCCCC
Q 002866 201 DIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKWPTL 279 (872)
Q Consensus 201 eARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~p~g 279 (872)
+.|++||+++|++ + .|+|++| |+|+++++.++ +++|++|++.. ..|.+.. .+...++..|+++..++.
T Consensus 2 ~l~~~la~~~g~~-~--~i~~~sG-~~a~~~~~~~~-~~~g~~v~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~----- 70 (331)
T 1pff_A 2 ALEGKIAKLEHAE-A--CAATASG-MGAIAASVWTF-LKAGDHLISDD-CLYGCTHALFEHQLRKFGVEVDFIDM----- 70 (331)
T ss_dssp HHHHHHHHHHTCS-E--EEEESSH-HHHHHHHHHHH-CCTTCEEEEES-CCCHHHHHHHHTHHHHTTCEEEEECT-----
T ss_pred hHHHHHHHHhCCC-e--EEEeCCh-HHHHHHHHHHh-cCCCCEEEEcC-CCcchHHHHHHHHHHhcCCEEEEeCC-----
Confidence 5789999999986 2 4655555 89999999887 57899987763 3455554 344445678999998875
Q ss_pred ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHH-CCcEEEeeccccCCCCCccCCCCCCCCcE
Q 002866 280 KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQ-NHWHVLLDAGSLGPKDMDSLGLSLFRPDF 357 (872)
Q Consensus 280 ~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are-~G~~VLVDAAQ~aG~~mipLDLs~l~~DF 357 (872)
.+.++++++|. +++++|.+++.+|.||.++|++. .+.|++ +|+++++|++|..|. ...++ ..++|+
T Consensus 71 -~d~~~l~~~i~--------~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~--~~~~~-~~~~d~ 138 (331)
T 1pff_A 71 -AVPGNIEKHLK--------PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPI--LTNPL-DLGVDI 138 (331)
T ss_dssp -TSTTHHHHTCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHH--HCCGG-GGTCSE
T ss_pred -CCHHHHHHhhc--------CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccc--cCChh-hcCCcE
Confidence 25677776664 35899999999999999999985 567899 999999999998775 23334 468999
Q ss_pred EEEcccccCCCCCCc--eEEEEEeC-CCcccccCCC
Q 002866 358 IITSFYRVFGFDPTG--FGCLLIKK-SVMGSLQNQS 390 (872)
Q Consensus 358 lv~S~HK~fG~~PtG--vG~LyVRk-~~i~~L~P~~ 390 (872)
+++|+||+||+ |.| .|++++++ +.++.+.+..
T Consensus 139 ~~~s~~K~~~~-~~~r~~G~~~~~~~~~~~~l~~~~ 173 (331)
T 1pff_A 139 VVHSATKYING-HTDVVAGLVCSRADIIAKVKSQGI 173 (331)
T ss_dssp EEEETTTTTSS-SSSCCCEEEEECHHHHHHHHHTCC
T ss_pred EEEECccccCC-CCCceEEEEEeCcHHHHHHHHHHH
Confidence 99999999997 777 89999998 8777777643
No 60
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.67 E-value=6.1e-16 Score=175.38 Aligned_cols=214 Identities=14% Similarity=0.037 Sum_probs=150.3
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCc-CCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALY-GGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~y-gNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
.-||.|-.+++.+...+..+.. ..+..+. ..| .+|....+.+++++.+++++|.+.+...++||+|+|+|
T Consensus 96 p~f~~~~~~~~~~~~~~~e~l~------~~~~~~~---~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a 166 (511)
T 3vp6_A 96 PRFFNQLSTGLDIIGLAGEWLT------STANTNM---FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAIS 166 (511)
T ss_dssp TTEESSSSCCCCHHHHHHHHHH------HHHCCCS---SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHH
T ss_pred CCceEeecCCCcHHHHHHHHHH------HHhccCC---CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHH
Confidence 4588887666655544432110 1111111 112 23444567788999999999998543469999999999
Q ss_pred HHHHHhhCC-------------CCCCCeEEEecccCchhHHHHHHHHHHcCc---EEEEEeccCCCCccCHHHHHHHHhh
Q 002866 229 FKLLAESYP-------------FHTNKKLLTMFDYESQSVNWMAQSAKEKGA---KVYSAWFKWPTLKLCSTDLRKQISS 292 (872)
Q Consensus 229 LnLVaeslp-------------f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGa---eV~~Vpvd~p~g~Id~edLe~~I~~ 292 (872)
+.++..... ..+++.|+++ +..|.++.. .++..|+ +++.+|++. ++.++.++|+++|..
T Consensus 167 ~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s-~~~H~s~~~---~~~~~g~g~~~~~~v~~d~-~~~~d~~~Le~~i~~ 241 (511)
T 3vp6_A 167 NMYSIMAARYKYFPEVKTKGMAAVPKLVLFTS-EQSHYSIKK---AGAALGFGTDNVILIKCNE-RGKIIPADFEAKILE 241 (511)
T ss_dssp HHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEE-TTSCTHHHH---HHHHTTSCGGGEEEECBCT-TSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhhcCcccCCCeEEEEC-CCchHHHHH---HHHHcCCCCCcEEEeecCC-CCccCHHHHHHHHHH
Confidence 876544321 1134456655 446776643 3455676 899999986 689999999999975
Q ss_pred hhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCc-----cCCCC-CCCCcEEEEccccc
Q 002866 293 KKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMD-----SLGLS-LFRPDFIITSFYRV 365 (872)
Q Consensus 293 ~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mi-----pLDLs-~l~~DFlv~S~HK~ 365 (872)
.+. ....+++|++++.+|.+|.+.|++. ...|+++|+++|||+|+.++. + +..+. ..++|++++++|||
T Consensus 242 ~~~--~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~--~~~~~~~~~~~g~~~aDsv~~~~hK~ 317 (511)
T 3vp6_A 242 AKQ--KGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGL--LMSRKHRHKLNGIERANSVTWNPHKM 317 (511)
T ss_dssp HHH--TTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGG--GGCTTTGGGGTTGGGCSEEEECTTST
T ss_pred HHh--cCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhH--hhChhhhhhccCCccCCEEEECcccc
Confidence 421 2234889999999999999999985 567899999999999988764 2 11222 13679999999999
Q ss_pred CCCCCCceEEEEEeCCC
Q 002866 366 FGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 366 fG~~PtGvG~LyVRk~~ 382 (872)
|+. |.|+|++++++..
T Consensus 318 l~~-p~g~g~l~~~~~~ 333 (511)
T 3vp6_A 318 MGV-LLQCSAILVKEKG 333 (511)
T ss_dssp TCC-CSCCEEEEESSTT
T ss_pred cCC-CcCeEEEEEeCHH
Confidence 998 8999999998864
No 61
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.67 E-value=8.8e-16 Score=160.19 Aligned_cols=204 Identities=16% Similarity=0.221 Sum_probs=148.5
Q ss_pred CCceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHH
Q 002866 148 SPKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRG 226 (872)
Q Consensus 148 ~~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnAT 226 (872)
+..|+|+.+... ++|+.+++++.+ . +.....|.+ ....+.|++||+++|++++ .|+||+|+|
T Consensus 16 ~~~i~l~~n~~~~~~~~~v~~a~~~--------~---~~~~~~y~~----~~~~~lr~~la~~~~~~~~--~i~~t~G~~ 78 (337)
T 3p1t_A 16 AQAVCLAFNENPEAVEPRVQAAIAA--------A---AARINRYPF----DAEPRVMRKLAEHFSCPED--NLMLVRGID 78 (337)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHH--------H---GGGTTSCCT----THHHHHHHHHHHHHTSCGG--GEEEESHHH
T ss_pred CCceEeeCCCCCCCCCHHHHHHHHH--------h---hhhhccCCC----CchHHHHHHHHHHhCcCHH--HEEEeCCHH
Confidence 348999998654 356777776432 1 111123432 2467899999999999876 599999999
Q ss_pred HHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEE
Q 002866 227 SAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFV 306 (872)
Q Consensus 227 eALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa 306 (872)
+++++++..+ +|++|++.. ..|. .+...++..|+++..+|+++ ++.++.++|+++ .++++++
T Consensus 79 ~~l~~~~~~~---~gd~vl~~~-p~~~---~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~----------~~~~~v~ 140 (337)
T 3p1t_A 79 ECFDRISAEF---SSMRFVTAW-PGFD---GYRARIAVSGLRHFEIGLTD-DLLLDPNDLAQV----------SRDDCVV 140 (337)
T ss_dssp HHHHHHHHHS---TTSEEEEES-SSCS---HHHHHHTTSCCEEEEECBCT-TSSBCHHHHTTC----------CTTEEEE
T ss_pred HHHHHHHHhc---CCCeEEEeC-CCcH---HHHHHHHHcCCEEEEecCCC-CCCCCHHHHHhh----------cCCCEEE
Confidence 9999999997 789987653 2233 33455677899999999876 467888877542 2478999
Q ss_pred EeCccCcccchhcHHH-HHHHHHCCcEEEeecccc--CCCCCccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCc
Q 002866 307 FPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSL--GPKDMDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVM 383 (872)
Q Consensus 307 ~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~--aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i 383 (872)
+++.+|.||.++|++. .+.++++++ +++|.++. .+. .+..+...+.++++.|++|+||.+..++|+++++++.+
T Consensus 141 i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~--~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~ 217 (337)
T 3p1t_A 141 LANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSF--RARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELI 217 (337)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSC--SSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHH
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccc--cccccccCCCEEEEeeCchhccCcchheEEEEeCHHHH
Confidence 9999999999999985 456788887 56699865 332 23334445678999999999983234579999888887
Q ss_pred ccccCC
Q 002866 384 GSLQNQ 389 (872)
Q Consensus 384 ~~L~P~ 389 (872)
+.+...
T Consensus 218 ~~l~~~ 223 (337)
T 3p1t_A 218 AAMKRK 223 (337)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 777653
No 62
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.66 E-value=1.4e-15 Score=160.56 Aligned_cols=194 Identities=11% Similarity=0.016 Sum_probs=140.4
Q ss_pred eecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHH
Q 002866 151 VCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFK 230 (872)
Q Consensus 151 IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALn 230 (872)
|+|+ .+++|+.+++++.+ .+.. .+.+|. ....++|++||+++|++ .|+||+|+|+|+.
T Consensus 4 i~~~---~~~~~~~v~~a~~~-----------~~~~--~~~~~~--~~~~~l~~~la~~~~~~----~v~~~~ggt~al~ 61 (375)
T 2fnu_A 4 FAYS---EPCLDKEDKKAVLE-----------VLNS--KQLTQG--KRSLLFEEALCEFLGVK----HALVFNSATSALL 61 (375)
T ss_dssp EESC---CCCCCHHHHHHHHH-----------HHTS--SCCSSS--HHHHHHHHHHHHHHTCS----EEEEESCHHHHHH
T ss_pred cccC---CCCCCHHHHHHHHH-----------HHHc--CcccCC--hHHHHHHHHHHHHhCCC----eEEEeCCHHHHHH
Confidence 5553 56788888887532 1211 223443 46789999999999986 4999999999999
Q ss_pred HHHhhCC--CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEe
Q 002866 231 LLAESYP--FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFP 308 (872)
Q Consensus 231 LVaeslp--f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p 308 (872)
+++.++. +++|++|++.. ..|.++.. .++..|++++.++++.. +.++.++|+++|. +++++|++.
T Consensus 62 ~~~~~~~~~~~~gd~Vl~~~-~~~~~~~~---~~~~~g~~~~~~~~~~~-~~~d~~~l~~~i~--------~~~~~v~~~ 128 (375)
T 2fnu_A 62 TLYRNFSEFSADRNEIITTP-ISFVATAN---MLLESGYTPVFAGIKND-GNIDELALEKLIN--------ERTKAIVSV 128 (375)
T ss_dssp HHHHHSSCCCTTSCEEEECS-SSCTHHHH---HHHHTTCEEEECCBCTT-SSBCGGGSGGGCC--------TTEEEEEEE
T ss_pred HHHHHhcccCCCCCEEEECC-CccHhHHH---HHHHCCCEEEEeccCCC-CCCCHHHHHhhcC--------cCceEEEEe
Confidence 9999986 78899988763 34555543 34457999999998763 5788888877664 257887776
Q ss_pred CccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCC--CCCCC-CcEEEEcccccCCCCCCceEEEEEeC--CC
Q 002866 309 VQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLG--LSLFR-PDFIITSFYRVFGFDPTGFGCLLIKK--SV 382 (872)
Q Consensus 309 ~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLD--Ls~l~-~DFlv~S~HK~fG~~PtGvG~LyVRk--~~ 382 (872)
+. ||.+.|++ +++.|+++|+++++|++|..+. .+.+ +..++ ++++++|.||+|| | |+|++++++ ++
T Consensus 129 ~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~~~i~~~s~s~~K~~~--~-g~g~~~~~~~~~~ 200 (375)
T 2fnu_A 129 DY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGS--EYQNKKVGGFALASVFSFHAIKPIT--T-AEGGAVVTNDSEL 200 (375)
T ss_dssp CG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTC--EETTEETTSSSSEEEEECCTTSSSC--C-SSCEEEEESCHHH
T ss_pred CC---cCCccCHHHHHHHHHHcCCEEEEECccccCC--eECCeeccccCCeEEEeCCCCCCcc--c-cCceEEEeCCHHH
Confidence 65 99999997 4567899999999999998875 3333 33333 4555666669997 7 999999953 34
Q ss_pred ccccc
Q 002866 383 MGSLQ 387 (872)
Q Consensus 383 i~~L~ 387 (872)
++.+.
T Consensus 201 ~~~~~ 205 (375)
T 2fnu_A 201 HEKMK 205 (375)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 63
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.65 E-value=1e-15 Score=163.37 Aligned_cols=208 Identities=14% Similarity=0.080 Sum_probs=149.5
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
++++|+.+...+ .|+.+.+++.+ .+.....|+.+. ...+.|++|+++++++++ .|+||+|+|+
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~-----------~~~~~~~y~~~~---~~~~l~~~la~~~~~~~~--~v~~~~g~~~ 89 (381)
T 1v2d_A 26 GAVNLGQGFPSNPPPPFLLEAVRR-----------ALGRQDQYAPPA---GLPALREALAEEFAVEPE--SVVVTSGATE 89 (381)
T ss_dssp TCEECCCCSCSSCCCHHHHHHHHH-----------HTTTSCSCCCTT---CCHHHHHHHHHHHTSCGG--GEEEESSHHH
T ss_pred CeEEecCCCCCCCCCHHHHHHHHH-----------HHHHhcCCCCCC---CCHHHHHHHHHhcCCChh--hEEEcCChHH
Confidence 367777665542 45667666432 111112344431 245899999999999876 4999999999
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc--CCCCccCHHHHHHHHhhhhccCCCCCceEE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK--WPTLKLCSTDLRKQISSKKRRKKDSAAGLF 305 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd--~p~g~Id~edLe~~I~~~~rr~~~~~T~LV 305 (872)
|+.+++.++ +++|++|++... .|.+.. ..++..|+++..+|++ ..+..++.++|++++. +++++|
T Consensus 90 a~~~~~~~~-~~~gd~Vl~~~~-~~~~~~---~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~--------~~~~~v 156 (381)
T 1v2d_A 90 ALYVLLQSL-VGPGDEVVVLEP-FFDVYL---PDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT--------PRTRAL 156 (381)
T ss_dssp HHHHHHHHH-CCTTCEEEEEES-CCTTHH---HHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC--------TTEEEE
T ss_pred HHHHHHHHh-CCCCCEEEEcCC-CchhHH---HHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC--------cCCEEE
Confidence 999999887 578999876532 344443 3456789999999986 2345688898887663 258999
Q ss_pred EEeCccCcccchhcH---H-HHHHHHHCCcEEEeeccccCCC-CCccCCCC--CCCCcEEEEcccccCCCCCCc--eEEE
Q 002866 306 VFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSLGPK-DMDSLGLS--LFRPDFIITSFYRVFGFDPTG--FGCL 376 (872)
Q Consensus 306 a~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~aG~-~mipLDLs--~l~~DFlv~S~HK~fG~~PtG--vG~L 376 (872)
.+++.+|.||.++|. + +++.|+++|+++++|.++.... ...+.++. ..+.|+++.|+||+|| +.| +|++
T Consensus 157 ~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~--~~G~r~G~~ 234 (381)
T 1v2d_A 157 LLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLE--ATGYRVGWI 234 (381)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTT--CGGGCCEEE
T ss_pred EECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcC--CcccceEEE
Confidence 999999999999984 4 3467799999999999987431 00123333 3579999999999998 458 8999
Q ss_pred EEeCCCccccc
Q 002866 377 LIKKSVMGSLQ 387 (872)
Q Consensus 377 yVRk~~i~~L~ 387 (872)
+++++.++.+.
T Consensus 235 ~~~~~~~~~~~ 245 (381)
T 1v2d_A 235 VGPKEFMPRLA 245 (381)
T ss_dssp ECCTTTHHHHH
T ss_pred EeCHHHHHHHH
Confidence 99887766553
No 64
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.65 E-value=2.2e-14 Score=150.97 Aligned_cols=193 Identities=15% Similarity=0.161 Sum_probs=132.2
Q ss_pred CceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
.++.|+.+... +.|+.+++++.+ ..... ..|.++ ...+.|++||++++++++ .|+||+|+|+
T Consensus 27 ~~idl~~~~~~~~~~~~v~~a~~~--------~~~~~---~~y~~~----~~~~l~~~la~~~~~~~~--~i~~~~g~t~ 89 (361)
T 3ftb_A 27 ELLDYSSNINPLGIPKSFLNNIDE--------GIKNL---GVYPDV----NYRRLNKSIENYLKLKDI--GIVLGNGASE 89 (361)
T ss_dssp -CEETTCCCCTTCSCHHHHTTHHH--------HHHGG---GSCCCT----TCHHHHHHHHHHHTCCSC--EEEEESSHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHH--------HHHHh---cCCCCc----cHHHHHHHHHHHhCCCcc--eEEEcCCHHH
Confidence 36777776443 356777776432 11111 233332 246899999999999876 5999999999
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVF 307 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~ 307 (872)
|+++++..+ ++|++..- .|.. +...++..|++++.+|++. .+.++.++|++++. + ++++.+
T Consensus 90 al~~~~~~~-----d~vi~~~~-~~~~---~~~~~~~~g~~~~~~~~~~-~~~~~~~~l~~~l~--------~-~~~v~i 150 (361)
T 3ftb_A 90 IIELSISLF-----EKILIIVP-SYAE---YEINAKKHGVSVVFSYLDE-NMCIDYEDIISKID--------D-VDSVII 150 (361)
T ss_dssp HHHHHHTTC-----SEEEEEES-CCTH---HHHHHHHTTCEEEEEECCT-TSCCCHHHHHHHTT--------T-CSEEEE
T ss_pred HHHHHHHHc-----CcEEEecC-ChHH---HHHHHHHcCCeEEEeecCc-ccCCCHHHHHHhcc--------C-CCEEEE
Confidence 999999987 77776532 2332 3445667899999999986 34677888887774 2 789999
Q ss_pred eCccCcccchhcHHH----HHHHHHCCcEEEeeccccCCCC---CccCCC-CCCCCcEEEEcccccCCCCCCceEEEE
Q 002866 308 PVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSLGPKD---MDSLGL-SLFRPDFIITSFYRVFGFDPTGFGCLL 377 (872)
Q Consensus 308 p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~aG~~---mipLDL-s~l~~DFlv~S~HK~fG~~PtGvG~Ly 377 (872)
++.+|.||.++|.+. ++.|+++|+++++|.++..... ...+.+ ...+.++++.|++|.||.+..++|+++
T Consensus 151 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~ 228 (361)
T 3ftb_A 151 GNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGI 228 (361)
T ss_dssp ETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEE
T ss_pred eCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEE
Confidence 999999999999753 3456799999999999763210 011111 123455788899999983122357666
No 65
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.65 E-value=1.6e-14 Score=156.96 Aligned_cols=167 Identities=14% Similarity=0.054 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
+..+++|+.+++++|++ .++||+|+|+|+.+++.++.+++|++|++.. ..|.++.. .++..|++++.++++.
T Consensus 42 ~l~~~l~~~la~~~g~~----~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~-~~~~~~~~---~~~~~g~~~~~~~~~~ 113 (418)
T 2c81_A 42 SMERKFAKAFADFNGVP----YCVPTTSGSTALMLALEALGIGEGDEVIVPS-LTWIATAT---AVLNVNALPVFVDVEA 113 (418)
T ss_dssp CHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEES-SSCTHHHH---HHHHTTCEEEEECBCT
T ss_pred HHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCcCEEEECC-CccHhHHH---HHHHcCCEEEEEecCC
Confidence 45788999999999986 3788999999999999998678899988763 34555543 3456899999999976
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCC-
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR- 354 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~- 354 (872)
.++.++.++|+++|.. ++++|.+ +|.||...|++ +++.|+++|+++++|++|+.+. . ++...++
T Consensus 114 ~~~~~d~~~l~~~i~~--------~~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~--~-~~~~~~~~ 179 (418)
T 2c81_A 114 DTYCIDPQLIKSAITD--------KTKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGS--V-WNNQRAGT 179 (418)
T ss_dssp TTCSBCHHHHGGGCCT--------TEEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTC--E-ETTEETTS
T ss_pred CCCCcCHHHHHHhhCC--------CCeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcccccC--c-cCCEeccc
Confidence 4577899988877642 5788775 56899999997 5577899999999999998874 1 2211111
Q ss_pred -CcEEEEcc--cccCCCCCCceEEEEEe-CCCccccc
Q 002866 355 -PDFIITSF--YRVFGFDPTGFGCLLIK-KSVMGSLQ 387 (872)
Q Consensus 355 -~DFlv~S~--HK~fG~~PtGvG~LyVR-k~~i~~L~ 387 (872)
.|++++|+ ||+||. + ..|+++.+ +++++.+.
T Consensus 180 ~~~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~ 214 (418)
T 2c81_A 180 IGDIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQ 214 (418)
T ss_dssp SSSEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHH
T ss_pred ccceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHH
Confidence 35555555 999984 2 45666654 35544443
No 66
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.65 E-value=2.2e-15 Score=161.19 Aligned_cols=171 Identities=13% Similarity=0.070 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCc--EEEEEecc
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGA--KVYSAWFK 275 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGa--eV~~Vpvd 275 (872)
..+.+|+.+++++|++++ .+|+.++|+|+.+++..+ +++|++|++.. ..|.++......++..|+ .+..++++
T Consensus 70 ~e~~ar~~la~~~g~~~~---~i~~~sGt~a~~~~~~~~-~~~gd~Vl~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 144 (407)
T 2dkj_A 70 VESLAIERAKALFGAAWA---NVQPHSGSQANMAVYMAL-MEPGDTLMGMD-LAAGGHLTHGSRVNFSGKLYKVVSYGVR 144 (407)
T ss_dssp HHHHHHHHHHHHHTCSEE---ECCCSSHHHHHHHHHHHH-CCTTCEEEEEC-GGGTCCGGGTCTTSHHHHHSEEEEECCC
T ss_pred HHHHHHHHHHHHhCCCcc---eEEecchHHHHHHHHHHh-cCCCCEEEEec-ccccCccchHHHHHhcCceEEEEecCCC
Confidence 334588999999999743 455556677999999987 67899987663 234433210111122344 34434334
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCC--
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSL-- 352 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~-- 352 (872)
..+..++.++|+++|... ++++|.++..+| |...|++ +.+.|+++|+++++|.+|..|. ...+...
T Consensus 145 ~~~~~~d~~~l~~~l~~~-------~~~~v~~~~p~~--~~~~~l~~i~~l~~~~~~~li~Dea~~~g~--~~~~~~~~~ 213 (407)
T 2dkj_A 145 PDTELIDLEEVRRLALEH-------RPKVIVAGASAY--PRFWDFKAFREIADEVGAYLVVDMAHFAGL--VAAGLHPNP 213 (407)
T ss_dssp TTTSSCCHHHHHHHHHHH-------CCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHH--HHTTCSCCC
T ss_pred cccCccCHHHHHHHHhhc-------CCeEEEEecccc--CCCCCHHHHHHHHHHcCCEEEEEccccccc--cccCccCCc
Confidence 224678999999998642 377888855555 5889997 4567899999999999987643 1122111
Q ss_pred -CCCcEEEEcccccCCCCCCceEEEEEe-CCCcccc
Q 002866 353 -FRPDFIITSFYRVFGFDPTGFGCLLIK-KSVMGSL 386 (872)
Q Consensus 353 -l~~DFlv~S~HK~fG~~PtGvG~LyVR-k~~i~~L 386 (872)
-.+|++++|+||++++ |.| |+++++ +++++.+
T Consensus 214 ~~~~di~~~s~sK~l~g-~~~-G~~~~~~~~~~~~l 247 (407)
T 2dkj_A 214 LPYAHVVTSTTHKTLRG-PRG-GLILSNDPELGKRI 247 (407)
T ss_dssp TTTCSEEEEESSGGGCC-CSC-EEEEESCHHHHHHH
T ss_pred cccccEEEEeccccCCC-CCc-eEEEECCHHHHHHH
Confidence 1389999999999877 777 999988 4554433
No 67
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.65 E-value=8e-15 Score=157.31 Aligned_cols=160 Identities=12% Similarity=0.040 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....+.|++||+++|++ .++||+|+|+|+.+++.++.+++|++|++.. ..|.++. ..++..|++++.++++.
T Consensus 56 ~~~~~l~~~la~~~~~~----~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~-~~~~~~~---~~~~~~g~~~~~~~~~~ 127 (391)
T 3dr4_A 56 RFIVEFEKAFADYCGVK----HAIACNNGTTALHLALVAMGIGPGDEVIVPS-LTYIASA---NSVTYCGATPVLVDNDP 127 (391)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHTCCTTCEEEEES-SSCTHHH---HHHHHTTCEEEEECBCT
T ss_pred hHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCcCEEEECC-CchHHHH---HHHHHCCCEEEEEecCc
Confidence 46789999999999986 4899999999999999988778899988763 3455443 33456799999999985
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCC--CCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGL--SLF 353 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDL--s~l 353 (872)
.++.++.++|++++.. ++++|. .+|.||.+.|++ +++.|+++|+++++|++|+.|. ...+. ..+
T Consensus 128 ~~~~~d~~~l~~~~~~--------~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~--~~~~~~~~~~ 194 (391)
T 3dr4_A 128 RTFNLDAAKLEALITP--------RTKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGA--TYRGKKSGSL 194 (391)
T ss_dssp TTCSBCGGGSGGGCCT--------TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTC--EETTEETTSS
T ss_pred cccCcCHHHHHHhcCC--------CceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccc--eECCeeeccc
Confidence 5678899988776642 577776 468999999998 4567899999999999998765 22222 222
Q ss_pred CCcEEEEc--ccccCCCCCCceEEEEEeC
Q 002866 354 RPDFIITS--FYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 354 ~~DFlv~S--~HK~fG~~PtGvG~LyVRk 380 (872)
.|+.++| .||++++ + ..|+++.++
T Consensus 195 -~di~~~S~s~~K~l~~-g-~gg~~~~~~ 220 (391)
T 3dr4_A 195 -GDCATFSFFGNAIITT-G-EGGMITTND 220 (391)
T ss_dssp -SSEEEEECBTTSSSCC-B-SCEEEEESC
T ss_pred -CCEEEEECCCCCcCCc-C-CeEEEEECC
Confidence 3555555 7799984 2 244554443
No 68
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.65 E-value=7.8e-16 Score=170.72 Aligned_cols=166 Identities=10% Similarity=0.034 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-HHHHHHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-MAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+++|++||+++|++ .+++++|+|+|+++++.++ +++||+||+.. .+|.++.. +...+++.|+++.+++.+
T Consensus 83 ~~~~le~~lA~l~g~~----~~i~~ssGt~Ai~~al~~l-~~~Gd~Vi~~~-~~y~~~~~~~~~~l~~~G~~v~~v~~~- 155 (415)
T 2fq6_A 83 THFSLQQAMCELEGGA----GCVLFPCGAAAVANSILAF-IEQGDHVLMTN-TAYEPSQDFCSKILSKLGVTTSWFDPL- 155 (415)
T ss_dssp HHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHTT-CCTTCEEEEET-TSCHHHHHHHHHTGGGGTCEEEEECTT-
T ss_pred hHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHH-hCCCCEEEEeC-CCchHHHHHHHHHHHHcCcEEEEECCC-
Confidence 4678999999999984 2556688899999999987 57899988774 35555554 334456789999988753
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHH--CCcEEEeeccccCCCCCccCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQ--NHWHVLLDAGSLGPKDMDSLGLSLF 353 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are--~G~~VLVDAAQ~aG~~mipLDLs~l 353 (872)
++++|+++|. ++|+||.+++.+|+||.++|++. .+.|++ +|+++++|++|+.+....++ .+
T Consensus 156 -----d~~~le~ai~--------~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~---~~ 219 (415)
T 2fq6_A 156 -----IGADIVKHLQ--------PNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL---DF 219 (415)
T ss_dssp -----CGGGGGGGCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG---GG
T ss_pred -----CHHHHHHhhc--------cCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcc---cc
Confidence 5677776664 35899999999999999999985 567899 99999999999865321344 36
Q ss_pred CCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 354 RPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 354 ~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
++|++++|+||++|+ |.+ .|+++.+++.++.+.
T Consensus 220 g~Div~~S~sK~lg~-~g~~~~G~l~~~~~~~~~l~ 254 (415)
T 2fq6_A 220 GIDVSIQAATKYLVG-HSDAMIGTAVCNARCWEQLR 254 (415)
T ss_dssp TCSEEEEETTTTTTC-SSSCCCEEEEECTTTHHHHH
T ss_pred CCeEEEEeCccccCC-CCCceEEEEEeCHHHHHHHH
Confidence 899999999999995 333 699998887655543
No 69
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.65 E-value=8.6e-16 Score=172.40 Aligned_cols=165 Identities=11% Similarity=0.074 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHH-HHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMA-QSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~-~~AkrkGaeV~~Vpvd 275 (872)
..++++|++||+++|++ + .|+|++| ++|+++++.++ +++|++||+... .|.++..+. ..+++.|++++.++.+
T Consensus 114 ~~~~~l~~~lA~l~g~~-~--~v~~~sG-~~Ai~~al~~l-~~~Gd~Vi~~~~-~y~~~~~~~~~~~~~~G~~v~~v~~~ 187 (445)
T 1qgn_A 114 PTTVVLEEKISALEGAE-S--TLLMASG-MCASTVMLLAL-VPAGGHIVTTTD-CYRKTRIFIETILPKMGITATVIDPA 187 (445)
T ss_dssp HHHHHHHHHHHHHHTCS-E--EEEESCH-HHHHHHHHHHH-SCSSCEEEEETT-SCHHHHHHHHHTGGGGTCEEEEECSS
T ss_pred hHHHHHHHHHHHHhCCC-c--EEEeCCH-HHHHHHHHHHH-hCCCCEEEEcCC-CchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 45788999999999985 2 4666555 59999999876 478999887754 455555443 3466789999998753
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCc-eEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAA-GLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLF 353 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T-~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l 353 (872)
+.++|+++|.. +| ++|.+.+.+|+||.++|++. .+.|+++|+++++|.+|+.+.. .+.-.+
T Consensus 188 ------d~~~l~~ai~~--------~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~---~~~~~~ 250 (445)
T 1qgn_A 188 ------DVGALELALNQ--------KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLN---QKALAL 250 (445)
T ss_dssp ------CHHHHHHHHHH--------SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT---CCTTTT
T ss_pred ------CHHHHHHHhcc--------CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc---CCcccc
Confidence 67899998864 47 99999999999999999984 5678999999999999987752 223356
Q ss_pred CCcEEEEcccccCCCCCCc---eEEEEEeCCCcccc
Q 002866 354 RPDFIITSFYRVFGFDPTG---FGCLLIKKSVMGSL 386 (872)
Q Consensus 354 ~~DFlv~S~HK~fG~~PtG---vG~LyVRk~~i~~L 386 (872)
++|+++.|+||+|| |.| +|+++.++++++.|
T Consensus 251 g~Div~~S~sK~~g--g~gd~~~G~l~~~~~l~~~l 284 (445)
T 1qgn_A 251 GADLVLHSATKFLG--GHNDVLAGCISGPLKLVSEI 284 (445)
T ss_dssp TCSEEEECTTTTTT--CSSSCCCEEEEECHHHHHHH
T ss_pred CCEEEEECCccccc--ccccceEEEEEECHHHHHHH
Confidence 89999999999999 556 99999988765544
No 70
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.64 E-value=8.3e-16 Score=169.23 Aligned_cols=159 Identities=9% Similarity=0.027 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEE-ec
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSA-WF 274 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~V-pv 274 (872)
..++++|++||+++|++ +.|+| .++|+|+++++.++ +++|++|++.. ..|.++ ..+...++..|++++.+ +.
T Consensus 58 ~~~~~l~~~la~~~g~~---~~v~~-~sGt~A~~~~l~~~-~~~gd~vi~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~ 131 (421)
T 2ctz_A 58 PTVDVLEKRLAALEGGK---AALAT-ASGHAAQFLALTTL-AQAGDNIVSTP-NLYGGTFNQFKVTLKRLGIEVRFTSRE 131 (421)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHH-CCTTCEEEECS-CCCHHHHHHHHTHHHHTTCEEEECCTT
T ss_pred hHHHHHHHHHHHHhCCC---ceEEe-cCHHHHHHHHHHHH-hCCCCEEEEeC-CCchHHHHHHHHHHHHcCCEEEEECCC
Confidence 46788999999999985 23555 45599999999887 67899988764 344444 44544467789999887 54
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccc-cCCCCCccCCCCC
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGS-LGPKDMDSLGLSL 352 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ-~aG~~mipLDLs~ 352 (872)
+ +.++|+++|.. +|++|++++.+|.+|.++|++ +.+.|+++|+++++|++| ..|....++ .
T Consensus 132 ~------d~~~l~~~i~~--------~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~---~ 194 (421)
T 2ctz_A 132 E------RPEEFLALTDE--------KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPL---A 194 (421)
T ss_dssp C------CHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGG---G
T ss_pred C------CHHHHHHhhcc--------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccCCcc---c
Confidence 3 57888877742 589999999999999999997 456789999999999999 877521123 4
Q ss_pred CCCcEEEEcccccCCCCCCc-eEEEEEe
Q 002866 353 FRPDFIITSFYRVFGFDPTG-FGCLLIK 379 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtG-vG~LyVR 379 (872)
.++|++++|+||+||+ |.+ +|++++.
T Consensus 195 ~~~Di~~~s~~K~l~~-~g~~~G~~~~~ 221 (421)
T 2ctz_A 195 WGAALVTHSLTKWVGG-HGAVIAGAIVD 221 (421)
T ss_dssp GTCSEEEEETTTTTTC-SSCCCCEEEEE
T ss_pred cCCeEEEECCcccccC-CCCcEEEEEEe
Confidence 6899999999999997 553 7888886
No 71
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.64 E-value=1.2e-15 Score=164.34 Aligned_cols=167 Identities=14% Similarity=0.108 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd 275 (872)
....+.|++||+++|++ + .|+|++| |+|+++++.++ +++|++|++... .|.++. .+...++..|+++..++.+
T Consensus 52 ~~~~~l~~~la~~~~~~-~--~i~~~sG-t~a~~~~~~~~-~~~g~~vl~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~ 125 (386)
T 1cs1_A 52 PTRDVVQRALAELEGGA-G--AVLTNTG-MSAIHLVTTVF-LKPGDLLVAPHD-CYGGSYRLFDSLAKRGCYRVLFVDQG 125 (386)
T ss_dssp HHHHHHHHHHHHHHTCS-E--EEEESSH-HHHHHHHHHHH-CCTTCEEEEETT-CCHHHHHHHHHHHTTTSCEEEEECTT
T ss_pred ccHHHHHHHHHHHhCCC-c--EEEeCCH-HHHHHHHHHHH-hCCCCEEEEecC-CcHhHHHHHHHHHHhcCCEEEEeCCC
Confidence 34678999999999986 2 4666655 99999999887 578999887643 455443 4545567789999988753
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR 354 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~ 354 (872)
+.++|+++|.. ++++|.+++.+|.||.++|++. .+.|+++|+++++|.+|..+. ....+ .++
T Consensus 126 ------d~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~--~~~~~-~~~ 188 (386)
T 1cs1_A 126 ------DEQALRAALAE--------KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPA--LQNPL-ALG 188 (386)
T ss_dssp ------CHHHHHHHHHT--------CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTT--TCCGG-GGT
T ss_pred ------CHHHHHHhhcc--------CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccc--cCCcc-ccC
Confidence 67889888863 4789999999999999999985 567899999999999998875 23333 468
Q ss_pred CcEEEEcccccCCCCCCce--EEEEEeC-CCccccc
Q 002866 355 PDFIITSFYRVFGFDPTGF--GCLLIKK-SVMGSLQ 387 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtGv--G~LyVRk-~~i~~L~ 387 (872)
+|++++|+||+||+ |.+. |++++++ ++++.+.
T Consensus 189 ~di~~~s~sK~~~~-~~~~~~G~~~~~~~~l~~~l~ 223 (386)
T 1cs1_A 189 ADLVLHSCTKYLNG-HSDVVAGVVIAKDPDVVTELA 223 (386)
T ss_dssp CSEEEEETTTTTTC-SSCCCCEEEEESSHHHHHHHH
T ss_pred ceEEEEcCcccccC-CCCceeEEEEeCcHHHHHHHH
Confidence 99999999999987 7774 9999987 6666554
No 72
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.63 E-value=1.9e-15 Score=163.62 Aligned_cols=205 Identities=10% Similarity=0.012 Sum_probs=148.2
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAF 229 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeAL 229 (872)
..|.|+.+++..-+.+.+++.. | .+......|+. ......+++|+++++++|++ .++++.++|+|+
T Consensus 27 ~~~~d~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~-~~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~ 92 (398)
T 2rfv_A 27 LSTPIFQTSTFVFDSAEQGAAR---F------ALEESGYIYTR-LGNPTTDALEKKLAVLERGE----AGLATASGISAI 92 (398)
T ss_dssp SSCCCCCCSBCCCSSHHHHHHH---C-----------CCSBTT-TCCHHHHHHHHHHHHHHTCS----EEEEESSHHHHH
T ss_pred cCCCCcCCCccccCCHHHHHHh---h------cCCCCCCceeC-CCChHHHHHHHHHHHHhCCC----cEEEECCHHHHH
Confidence 6799999999877665554210 0 01000111221 11356789999999999985 266666778999
Q ss_pred HHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEe
Q 002866 230 KLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFP 308 (872)
Q Consensus 230 nLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p 308 (872)
++++.++ +++|++|++... .|.++. .+...++..|++++.++.+ +.++|+++|.. ++++|.++
T Consensus 93 ~~~l~~~-~~~gd~vi~~~~-~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~i~~--------~~~~v~~~ 156 (398)
T 2rfv_A 93 TTTLLTL-CQQGDHIVSASA-IYGCTHAFLSHSMPKFGINVRFVDAA------KPEEIRAAMRP--------ETKVVYIE 156 (398)
T ss_dssp HHHHHHH-CCTTCEEEEESS-SCHHHHHHHHTHHHHTTCEEEEECTT------SHHHHHHHCCT--------TEEEEEEE
T ss_pred HHHHHHH-hCCCCEEEEcCC-CcccHHHHHHHHHHHcCCEEEEeCCC------CHHHHHHhcCC--------CCeEEEEE
Confidence 9999887 578999887643 455554 3444457789999988763 57888777742 58999999
Q ss_pred CccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCcc-
Q 002866 309 VQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMG- 384 (872)
Q Consensus 309 ~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~- 384 (872)
+.+|.||.++|++. .+.|+++|+++++|.++..+.. ...+ .+++|+++.|+||+||+ |.+ .|+++++++.+.
T Consensus 157 ~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~--~~~~-~~~~di~~~s~sK~~~~-~g~~~~G~~~~~~~~~~~ 232 (398)
T 2rfv_A 157 TPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYC--QQPL-QLGADIVVHSVTKYING-HGDVIGGIIVGKQEFIDQ 232 (398)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTT--CCGG-GGTCSEEEEETTTTTTC-SSCCCCEEEEECHHHHHH
T ss_pred CCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc--CCch-hhCCcEEEEeCcccccC-CCCceEEEEEECHHHHHH
Confidence 99999999999975 5678999999999999987752 2112 35799999999999987 666 599999987765
Q ss_pred cccC
Q 002866 385 SLQN 388 (872)
Q Consensus 385 ~L~P 388 (872)
.+.+
T Consensus 233 ~~~~ 236 (398)
T 2rfv_A 233 ARFV 236 (398)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 4543
No 73
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.63 E-value=5.3e-15 Score=155.65 Aligned_cols=211 Identities=10% Similarity=0.070 Sum_probs=152.4
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
.+++|+.+.... .|+.+++++.+ .+.. .++.|. ....+.|++||+++|++++ .|+||+|+|+
T Consensus 17 ~~i~l~~~~~~~~~~~~v~~a~~~-----------~~~~--~~~y~~--~~~~~l~~~la~~~~~~~~--~i~~~~g~~~ 79 (354)
T 3ly1_A 17 NPIRINFNENPLGMSPKAQAAARD-----------AVVK--ANRYAK--NEILMLGNKLAAHHQVEAP--SILLTAGSSE 79 (354)
T ss_dssp SCEECSSCCCSSCCCHHHHHHHHH-----------TGGG--TTSCCH--HHHHHHHHHHHHHTTSCGG--GEEEESHHHH
T ss_pred ceEEccCCCCCCCCCHHHHHHHHH-----------HHhh--CcCCCC--CchHHHHHHHHHHhCCChH--HEEEeCChHH
Confidence 378888776543 56777776432 1111 223343 3567999999999999776 5999999999
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVF 307 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~ 307 (872)
|+++++.++ .++|++|++... .|.+ +...++..|++++.+|++. +..++.++|+++|.. .+++++|.+
T Consensus 80 a~~~~~~~l-~~~gd~vl~~~~-~~~~---~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~l~~------~~~~~~v~l 147 (354)
T 3ly1_A 80 GIRAAIEAY-ASLEAQLVIPEL-TYGD---GEHFAKIAGMKVTKVKMLD-NWAFDIEGLKAAVAA------YSGPSIVYL 147 (354)
T ss_dssp HHHHHHHHH-CCTTCEEEEESS-SCTH---HHHHHHHTTCEEEEECCCT-TSCCCHHHHHHHHHT------CSSCEEEEE
T ss_pred HHHHHHHHH-hCCCCeEEECCC-CchH---HHHHHHHcCCEEEEecCCC-CCCCCHHHHHHHhcc------CCCCCEEEE
Confidence 999999987 478999886632 3333 3455677899999999985 477899999999963 135899999
Q ss_pred eCccCcccchhcHHHH-HHHHH--CCcEEEeeccccCCCCC-ccCC----CCCC-CCcEEEEcccccCCCCCCceEEEEE
Q 002866 308 PVQSRVTGAKYSYQWM-ALAQQ--NHWHVLLDAGSLGPKDM-DSLG----LSLF-RPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 308 p~vSNvTG~i~PLe~I-~~Are--~G~~VLVDAAQ~aG~~m-ipLD----Ls~l-~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
++.+|.||.++|++.+ +.++. +|+++++|.++...... .... +... +.++++.|++|+||.+..++|++++
T Consensus 148 ~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 227 (354)
T 3ly1_A 148 VNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA 227 (354)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC
T ss_pred eCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec
Confidence 9999999999999754 44455 89999999997632100 0001 1223 6679999999999831345899999
Q ss_pred eCCCcccccC
Q 002866 379 KKSVMGSLQN 388 (872)
Q Consensus 379 Rk~~i~~L~P 388 (872)
+++.++.+..
T Consensus 228 ~~~~~~~~~~ 237 (354)
T 3ly1_A 228 HPTVIALMGR 237 (354)
T ss_dssp CHHHHHHHGG
T ss_pred CHHHHHHHHH
Confidence 8877766654
No 74
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.63 E-value=4.1e-15 Score=158.13 Aligned_cols=202 Identities=11% Similarity=0.104 Sum_probs=144.8
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC------CCCCCCcEEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN------IPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg------A~~dEY~VVF 221 (872)
.+++|+.+...+ .|+.+.+++.+ .+... ...|+.+. ...+.|+.||++++ ++++ .|+|
T Consensus 30 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~~~~---~~~y~~~~---~~~~l~~~la~~~~~~~g~~~~~~--~v~~ 94 (370)
T 2z61_A 30 KVIHLEIGEPDFNTPKPIVDEGIK-------SLKEG---KTHYTDSR---GILELREKISELYKDKYKADIIPD--NIII 94 (370)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHH-------HHHTT---CCSCCCTT---CCHHHHHHHHHHHHHHSSCCCCGG--GEEE
T ss_pred CEEEccCCCCCCCCCHHHHHHHHH-------HHHcC---ccCCCCCC---CCHHHHHHHHHHHHHHhCCCCChh--hEEE
Confidence 478999888764 46777776432 12111 12344321 23468888888875 5554 5999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSA 301 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~ 301 (872)
|+|+|+|+.+++.++ +++|++|++..- .|.+.. ..++..|+++..+| ++.++|++++.. +
T Consensus 95 ~~g~~~a~~~~~~~~-~~~gd~vl~~~p-~~~~~~---~~~~~~g~~~~~v~-------~d~~~l~~~l~~--------~ 154 (370)
T 2z61_A 95 TGGSSLGLFFALSSI-IDDGDEVLIQNP-CYPCYK---NFIRFLGAKPVFCD-------FTVESLEEALSD--------K 154 (370)
T ss_dssp ESSHHHHHHHHHHHH-CCTTCEEEEESS-CCTHHH---HHHHHTTCEEEEEC-------SSHHHHHHHCCS--------S
T ss_pred CCChHHHHHHHHHHh-cCCCCEEEEeCC-CchhHH---HHHHHcCCEEEEeC-------CCHHHHHHhccc--------C
Confidence 999999999999987 578999877632 344443 34566899998876 567888877742 5
Q ss_pred ceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCC-ccCCCCC----CCCcEEEEcccccCCCCCCc--eE
Q 002866 302 AGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDM-DSLGLSL----FRPDFIITSFYRVFGFDPTG--FG 374 (872)
Q Consensus 302 T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~m-ipLDLs~----l~~DFlv~S~HK~fG~~PtG--vG 374 (872)
+++|.+++.+|.||.++|+++++.|+++|+++++|.++..+... .+.++.. .+.|+++.|+||+|| +.| +|
T Consensus 155 ~~~v~~~~p~nptG~~~~~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~--~~G~r~G 232 (370)
T 2z61_A 155 TKAIIINSPSNPLGEVIDREIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYA--MTGWRIG 232 (370)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTT--CGGGCCE
T ss_pred ceEEEEcCCCCCcCcccCHHHHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccC--CccceEE
Confidence 88999999999999999999446789999999999998754300 0223332 367999999999998 458 89
Q ss_pred EEEEeCCCccccc
Q 002866 375 CLLIKKSVMGSLQ 387 (872)
Q Consensus 375 ~LyVRk~~i~~L~ 387 (872)
++++++++++.+.
T Consensus 233 ~~~~~~~~~~~~~ 245 (370)
T 2z61_A 233 YVISNDEIIEAIL 245 (370)
T ss_dssp EEECCHHHHHHHH
T ss_pred EEEECHHHHHHHH
Confidence 9999887666554
No 75
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.63 E-value=5.4e-16 Score=169.50 Aligned_cols=164 Identities=15% Similarity=0.143 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-HHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-MAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~~~~AkrkGaeV~~Vpvd 275 (872)
..++++|++||+++|++ + .|+||+ +|+|+++++. + +++|++|++... +|.++.. +...++..|++++.+|++
T Consensus 55 ~~~~~lr~~la~~~g~~-~--~i~~~s-Gt~a~~~al~-~-~~~gd~Vi~~~~-~y~~~~~~~~~~~~~~G~~v~~v~~~ 127 (393)
T 1n8p_A 55 PNRENLERAVAALENAQ-Y--GLAFSS-GSATTATILQ-S-LPQGSHAVSIGD-VYGGTHRYFTKVANAHGVETSFTNDL 127 (393)
T ss_dssp HHHHHHHHHHHHHTTCS-E--EEEESC-HHHHHHHHHH-T-SCSSCEEEEESS-CCHHHHHHHHHTSTTTCSCCEEESSH
T ss_pred hhHHHHHHHHHHHhCCC-c--EEEECC-hHHHHHHHHH-H-cCCCCEEEEeCC-CchHHHHHHHHHHHHcCcEEEEeCCC
Confidence 45789999999999986 2 355555 5999999998 5 578999887753 4554443 334566779999988764
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHC----CcEEEeeccccCCCCCccCCC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQN----HWHVLLDAGSLGPKDMDSLGL 350 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~----G~~VLVDAAQ~aG~~mipLDL 350 (872)
+ ++|+++|. ++|++|.+++.+|+||.++|++. .+.|+++ |+++++|++|+.+. . .++
T Consensus 128 ------d-~~l~~~i~--------~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~--~-~~~ 189 (393)
T 1n8p_A 128 ------L-NDLPQLIK--------ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPY--I-SNP 189 (393)
T ss_dssp ------H-HHHHHHSC--------SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHH--H-CCG
T ss_pred ------h-HHHHHhcc--------cCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccc--c-CCH
Confidence 4 66766664 25899999999999999999984 5678999 99999999998775 2 245
Q ss_pred CCCCCcEEEEcccccCCCCCCc--e-EEEEEe-CCCccccc
Q 002866 351 SLFRPDFIITSFYRVFGFDPTG--F-GCLLIK-KSVMGSLQ 387 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~~PtG--v-G~LyVR-k~~i~~L~ 387 (872)
..+++|++++|+||+|| |.| + |+++++ ++.++.+.
T Consensus 190 ~~~~~di~~~S~sK~~g--~~G~rigG~~~~~~~~~~~~l~ 228 (393)
T 1n8p_A 190 LNFGADIVVHSATKYIN--GHSDVVLGVLATNNKPLYERLQ 228 (393)
T ss_dssp GGGTCSEEEEETTTTTT--CSSCCCCEEEEESCHHHHHHHH
T ss_pred HHcCCeEEEEECccccc--CCCCceeEEEEeCCHHHHHHHH
Confidence 55689999999999999 568 7 888876 45555443
No 76
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.63 E-value=6.7e-15 Score=157.18 Aligned_cols=212 Identities=13% Similarity=0.128 Sum_probs=148.2
Q ss_pred CCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----CCCCCCCc-EEE
Q 002866 148 SPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----NIPENEYG-LVF 221 (872)
Q Consensus 148 ~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----gA~~dEY~-VVF 221 (872)
..+++|+.+...+ .++.+.+++.+ .+... ...|+.+. ...+.|++||+++ |.+.+... |+|
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~-------~~~~~---~~~y~~~~---g~~~l~~~la~~~~~~~g~~~~~~~~v~~ 92 (389)
T 1gd9_A 26 KDVISLGIGEPDFDTPQHIKEYAKE-------ALDKG---LTHYGPNI---GLLELREAIAEKLKKQNGIEADPKTEIMV 92 (389)
T ss_dssp SSCEECCCCSCSSCCCHHHHHHHHH-------HHHTT---CCSCCCTT---CCHHHHHHHHHHHHHHHCCCCCTTTSEEE
T ss_pred cCeEecCCCCCCCCCCHHHHHHHHH-------HHhCC---CCCCCCCC---CcHHHHHHHHHHHHHHhCCCCCCCCeEEE
Confidence 4689999887763 56677776432 12111 11343321 2347888888888 84322226 999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHHHhhhhccCCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~I~~~~rr~~~~ 300 (872)
|+|+|+|+.+++.++ +++|++|++... .|.++. ..++..|+++..+|++.. +..++.++|++++..
T Consensus 93 ~~g~~~a~~~~~~~~-~~~gd~vl~~~~-~~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------- 159 (389)
T 1gd9_A 93 LLGANQAFLMGLSAF-LKDGEEVLIPTP-AFVSYA---PAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTD-------- 159 (389)
T ss_dssp ESSTTHHHHHHHTTT-CCTTCEEEEEES-CCTTHH---HHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCT--------
T ss_pred cCChHHHHHHHHHHh-CCCCCEEEEcCC-CchhHH---HHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCc--------
Confidence 999999999999988 578999876632 344443 345567999999998742 345789999887742
Q ss_pred CceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccCCCCC-c-cCCCCC----CCCcEEEEcccccCCCCC
Q 002866 301 AAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLGPKDM-D-SLGLSL----FRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~aG~~m-i-pLDLs~----l~~DFlv~S~HK~fG~~P 370 (872)
++++|.+++.+|.||.++| ++ +++.|+++|+++++|.++..+... . ...+.. .++|+++.|+||+|| +
T Consensus 160 ~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~--~ 237 (389)
T 1gd9_A 160 KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFA--M 237 (389)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTT--C
T ss_pred CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcC--C
Confidence 4789999999999999997 44 356779999999999998764310 0 122322 457999999999998 4
Q ss_pred Cc--eEEEEEeCCCccccc
Q 002866 371 TG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 371 tG--vG~LyVRk~~i~~L~ 387 (872)
.| +|+++++++.++.+.
T Consensus 238 ~G~r~G~~~~~~~~~~~l~ 256 (389)
T 1gd9_A 238 TGWRLGFVAAPSWIIERMV 256 (389)
T ss_dssp GGGCCEEEECCHHHHHHHH
T ss_pred cccceEEEEECHHHHHHHH
Confidence 57 699999877665554
No 77
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.62 E-value=1.9e-15 Score=162.69 Aligned_cols=209 Identities=11% Similarity=0.048 Sum_probs=147.2
Q ss_pred CceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----CC--CCCCCcEEE
Q 002866 149 PKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----NI--PENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----gA--~~dEY~VVF 221 (872)
.+++|+.+... +.|+.+.+++.+ .+ ... ...|+.+ ....+.|+.||+++ |+ +++ .|+|
T Consensus 42 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~-~~~--~~~y~~~---~g~~~lr~~la~~~~~~~g~~~~~~--~v~~ 106 (389)
T 1o4s_A 42 DVINLTAGEPDFPTPEPVVEEAVR-------FL-QKG--EVKYTDP---RGIYELREGIAKRIGERYKKDISPD--QVVV 106 (389)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHH-------HH-TTC--CCCCCCT---TCCHHHHHHHHHHHHHHHTCCCCGG--GEEE
T ss_pred CEEEccCCCCCCCCCHHHHHHHHH-------HH-hcC--CCCCCCC---CCCHHHHHHHHHHHHHHhCCCCCHH--HEEE
Confidence 47899888765 346677776432 11 110 1124332 12357888888887 76 444 6999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHHHhhhhccCCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~I~~~~rr~~~~ 300 (872)
|+|+|+|+.+++.++ +++|++|++... .|.++. ..++..|+++..+|.+.. +..++.++|+++|..
T Consensus 107 ~~g~t~al~~~~~~l-~~~gd~Vl~~~~-~~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------- 173 (389)
T 1o4s_A 107 TNGAKQALFNAFMAL-LDPGDEVIVFSP-VWVSYI---PQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG-------- 173 (389)
T ss_dssp ESHHHHHHHHHHHHH-CCTTCEEEEEES-CCTTHH---HHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT--------
T ss_pred ecCHHHHHHHHHHHh-CCCCCEEEEcCC-CchhHH---HHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc--------
Confidence 999999999999987 578999876532 344443 345668999999998642 346788999887742
Q ss_pred CceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccCCCCC-ccCCCCC----CCCcEEEEcccccCCCCCC
Q 002866 301 AAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLGPKDM-DSLGLSL----FRPDFIITSFYRVFGFDPT 371 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~aG~~m-ipLDLs~----l~~DFlv~S~HK~fG~~Pt 371 (872)
++++|.+++.+|.||.++| ++ +++.|+++|+++++|.++..+... -..++.. .+.|+++.|+||+|| +.
T Consensus 174 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~--~~ 251 (389)
T 1o4s_A 174 KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHS--MT 251 (389)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTT--CG
T ss_pred CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcC--Cc
Confidence 5889999999999999999 54 456789999999999998754310 0122221 468999999999998 45
Q ss_pred c--eEEEEEeCCCccccc
Q 002866 372 G--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 372 G--vG~LyVRk~~i~~L~ 387 (872)
| +|+++++++.++.+.
T Consensus 252 G~r~G~l~~~~~~~~~l~ 269 (389)
T 1o4s_A 252 GWRVGYLISSEKVATAVS 269 (389)
T ss_dssp GGCCEEEECCHHHHHHHH
T ss_pred ccceEEEEeCHHHHHHHH
Confidence 7 899999877665554
No 78
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.62 E-value=2.6e-15 Score=167.75 Aligned_cols=208 Identities=10% Similarity=-0.017 Sum_probs=149.1
Q ss_pred CceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcC----CCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCC
Q 002866 149 PKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYG----GAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVS 224 (872)
Q Consensus 149 ~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg----NpsS~~~ieeARerIA~lLgA~~dEY~VVFTsn 224 (872)
..+||+ +.+....+.+++++.+ .......|. .+...+.++++++.+++++|++. .++||++
T Consensus 67 ~~~~lg-~~~~~~~p~v~~~~~~-----------~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~~~g 131 (474)
T 1wyu_B 67 TFYPLG-SCTMKYNPKLHEEAAR-----------LFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLEPAA 131 (474)
T ss_dssp SCCCBT-TTCCCCCCHHHHHHHH-----------TTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECCCSS
T ss_pred Cccccc-cccccCCHHHHHHHHH-----------HHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeecChH
Confidence 478999 5566555556665432 111111121 11124688899999999999964 4789999
Q ss_pred HHHHHHHH---HhhCCCCCCC-----eEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhcc
Q 002866 225 RGSAFKLL---AESYPFHTNK-----KLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRR 296 (872)
Q Consensus 225 ATeALnLV---aeslpf~~Gd-----~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr 296 (872)
+|+|+.+. +..+..++|+ +||+.. ..|.+... .++..|++++.+|++. ++.++.++|+++|..
T Consensus 132 gt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~-~~h~~~~~---~~~~~G~~vv~v~~~~-~~~~d~~~L~~~i~~---- 202 (474)
T 1wyu_B 132 GAHGELTGILIIRAYHEDRGEGRTRRVVLVPD-SAHGSNPA---TASMAGYQVREIPSGP-EGEVDLEALKRELGP---- 202 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTTCCEEEEET-TSCTHHHH---HHHHTTCEEEEECBCT-TSSBCHHHHHHHCST----
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCCCEEEEeC-CcChhhHH---HHHHCCCEEEEecCCC-CCCcCHHHHHHhhCC----
Confidence 99998863 3222223555 777663 45665553 3566899999999975 588999999988853
Q ss_pred CCCCCceEEEEeCccCcccch-hcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCCcEEEEcccccCCCCCC---
Q 002866 297 KKDSAAGLFVFPVQSRVTGAK-YSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGFDPT--- 371 (872)
Q Consensus 297 ~~~~~T~LVa~p~vSNvTG~i-~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~DFlv~S~HK~fG~~Pt--- 371 (872)
+|++|.+++. |.+|.+ .|++. .+.|+++|+++++|+++..+. .-.++...+++|++++|+||+|+. |.
T Consensus 203 ----~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~-~g~~~~~~~g~di~~~s~~K~~~~-p~g~g 275 (474)
T 1wyu_B 203 ----HVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAI-MGWARPGDMGFDVVHLNLHKTFTV-PHGGG 275 (474)
T ss_dssp ----TEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGT-TTTCCHHHHTCSEEECCTTTTTCC-CCTTS
T ss_pred ----CceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhh-ccCCCcccCCCcEEEEeCcccccc-CCCCC
Confidence 4889999985 679998 69974 567899999999999997654 113444556899999999999988 76
Q ss_pred --ceEEEEEeCCCccccc
Q 002866 372 --GFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 372 --GvG~LyVRk~~i~~L~ 387 (872)
|+|+++++++.++.+.
T Consensus 276 G~~~G~~~~~~~l~~~l~ 293 (474)
T 1wyu_B 276 GPGSGPVGVKAHLAPYLP 293 (474)
T ss_dssp CCCCCCEEECGGGGGGCC
T ss_pred CCCeEEEEEcHHHHHhCC
Confidence 6999999998777665
No 79
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.61 E-value=5.1e-15 Score=160.53 Aligned_cols=211 Identities=14% Similarity=0.041 Sum_probs=148.3
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC------CCCCCCcEEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN------IPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg------A~~dEY~VVF 221 (872)
.+++|+.+.... .++.+++++.+ .+.... ...|+.+. .+.+.|++||++++ ++++ .|+|
T Consensus 45 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~~~~~--~~~y~~~~---g~~~lr~~la~~~~~~~g~~~~~~--~i~~ 110 (437)
T 3g0t_A 45 KFCRMEMGVPGLPAPQIGIETEIQ-------KLREGV--ASIYPNLD---GLPELKQEASRFAKLFVNIDIPAR--ACVP 110 (437)
T ss_dssp CCEECCCCSCCSCCCHHHHHHHHH-------HHHHTG--GGSCCCTT---CCHHHHHHHHHHHHHHHCCCCCGG--GEEE
T ss_pred CEEeccCcCCCCCCCHHHHHHHHH-------HHhCCc--CcCCCCCC---ChHHHHHHHHHHHHHhhCCCCCcc--cEEE
Confidence 478888777654 45677776432 122111 02344432 13578899999888 5555 5999
Q ss_pred eCCHHHHHHHHHhhCCC-CCCC--eEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCC
Q 002866 222 TVSRGSAFKLLAESYPF-HTNK--KLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 222 TsnATeALnLVaeslpf-~~Gd--~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~ 298 (872)
|+|+|+|+++++.++.+ ++|+ +|++.. ..|. .+...++..|++++.+|++..+..++.++|+++|..
T Consensus 111 t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~-p~~~---~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~------ 180 (437)
T 3g0t_A 111 TVGSMQGCFVSFLVANRTHKNREYGTLFID-PGFN---LNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQT------ 180 (437)
T ss_dssp ESHHHHHHHHHHHHHTTSCTTCSCCEEEEE-SCCH---HHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTT------
T ss_pred eCCHHHHHHHHHHHHhcCCCCCccEEEEeC-CCcH---hHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhc------
Confidence 99999999999998743 7899 887652 2233 344456678999999999744456789999988842
Q ss_pred CCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCC--CCcc--------CCCCC-CCCcEEEEccc
Q 002866 299 DSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPK--DMDS--------LGLSL-FRPDFIITSFY 363 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~--~mip--------LDLs~-l~~DFlv~S~H 363 (872)
+++++|.+++.+|.||+++|.+ +++.|+++|+++++|.++.... ...+ .++.. .+.++++.|++
T Consensus 181 -~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 259 (437)
T 3g0t_A 181 -GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSS 259 (437)
T ss_dssp -TCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEEST
T ss_pred -CCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCc
Confidence 2588999999999999999964 3466799999999999986411 0012 24443 67789999999
Q ss_pred ccCCCCCCceEEEEEeCCCcc
Q 002866 364 RVFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 364 K~fG~~PtGvG~LyVRk~~i~ 384 (872)
|+||.+..++|+++++++.++
T Consensus 260 K~~~~~G~r~G~~~~~~~~~~ 280 (437)
T 3g0t_A 260 KAFSYAGQRIGVLMISGKLYE 280 (437)
T ss_dssp TTTSCGGGCCEEEEECHHHHH
T ss_pred cCCCCccceeEEEEECHHHhh
Confidence 999831223999999887665
No 80
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.61 E-value=1.1e-14 Score=154.63 Aligned_cols=212 Identities=11% Similarity=0.067 Sum_probs=148.0
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC--CCCCCCcEEEeCCH
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN--IPENEYGLVFTVSR 225 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg--A~~dEY~VVFTsnA 225 (872)
+++.|..+.... .|+.+++++.+ ..... ...|+.+ ..+..+++++.+++.+| ++++ .|+||+|+
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~--------~~~~~--~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~--~i~~~~g~ 94 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEE--------KLKVA--AFGYESV-PAEYYKAVADWEEIEHRARPKED--WCVFASGV 94 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHH--------HHTTC--CCCCBCC-CHHHHHHHHHHHHHHHSCCCCGG--GEEEESCH
T ss_pred CceeccccCCCCCCCHHHHHHHHH--------HHhcC--cCCCCCC-CHHHHHHHHHHHHHHhCCCCCHH--HEEECCCH
Confidence 367777665443 56777776432 11110 1123333 34667778888888888 5554 69999999
Q ss_pred HHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC--CccCHHHHHHHHhhhhccCCCCCce
Q 002866 226 GSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT--LKLCSTDLRKQISSKKRRKKDSAAG 303 (872)
Q Consensus 226 TeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~--g~Id~edLe~~I~~~~rr~~~~~T~ 303 (872)
|+|+++++.++ +++|++|++.. ..|.+ +...++..|+++..+|+++.. ..++.++|+++|.. ++++
T Consensus 95 ~~a~~~~~~~l-~~~gd~vl~~~-~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~ 162 (391)
T 3dzz_A 95 VPAISAMVRQF-TSPGDQILVQE-PVYNM---FYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT-------PSVR 162 (391)
T ss_dssp HHHHHHHHHHH-SCTTCEEEECS-SCCHH---HHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS-------TTEE
T ss_pred HHHHHHHHHHh-CCCCCeEEECC-CCcHH---HHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc-------cCce
Confidence 99999999987 57899988763 33443 344566789999999885322 23799999998862 2589
Q ss_pred EEEEeCccCcccchhcH---H-HHHHHHHCCcEEEeeccccC----CCCCccCCCCCCC---Cc--EEEEcccccCCCCC
Q 002866 304 LFVFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSLG----PKDMDSLGLSLFR---PD--FIITSFYRVFGFDP 370 (872)
Q Consensus 304 LVa~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~a----G~~mipLDLs~l~---~D--Flv~S~HK~fG~~P 370 (872)
+|++++.+|.||.++|. + +++.|+++|+++++|.++.. |+ ...++..+. +| +++.|+||+||.+.
T Consensus 163 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G 240 (391)
T 3dzz_A 163 MMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDE--DITPAFTVDWDAKNWVVSLISPSKTFNLAA 240 (391)
T ss_dssp EEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC--CCCCGGGSCTTTGGGEEEEECSHHHHTCTT
T ss_pred EEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCC--CceehhhcCccccCcEEEEEeChhhccccc
Confidence 99999999999999654 4 34567999999999999874 32 234454444 67 99999999987313
Q ss_pred CceEEEEEe-CCCccccc
Q 002866 371 TGFGCLLIK-KSVMGSLQ 387 (872)
Q Consensus 371 tGvG~LyVR-k~~i~~L~ 387 (872)
.++|+++++ +++++.+.
T Consensus 241 ~r~G~~~~~~~~~~~~~~ 258 (391)
T 3dzz_A 241 LHAACAIIPNPDLRARAE 258 (391)
T ss_dssp TCCEEEECCSHHHHHHHH
T ss_pred hhheEEEECCHHHHHHHH
Confidence 458999987 55555553
No 81
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.61 E-value=7.8e-15 Score=159.45 Aligned_cols=167 Identities=9% Similarity=0.012 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd 275 (872)
....+.|++||+++|++ .+++++|+|+|+.+++.++ +++|++|++... .|.++ ..+...++..|++++.++.
T Consensus 59 ~~~~~l~~~la~~~g~~----~~i~~~sG~~ai~~~~~~~-~~~gd~vl~~~~-~y~~~~~~~~~~~~~~g~~~~~v~~- 131 (389)
T 3acz_A 59 PTVEQFEEMVCSIEGAA----GSAAFGSGMGAISSSTLAF-LQKGDHLIAGDT-LYGCTVSLFTHWLPRFGIEVDLIDT- 131 (389)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHTTT-CCTTCEEEEESS-CCHHHHHHHHHHHHHTTCEEEEECT-
T ss_pred hHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHH-hCCCCEEEEeCC-CchHHHHHHHHHHHHcCCEEEEECC-
Confidence 35678999999999985 2667777889999999887 678999887643 44444 4455557788999998875
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR 354 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~ 354 (872)
.+.++|+++|. ++|++|.++..+|.||.++|++. .+.|+++|+++++|.++..+....+++ ++
T Consensus 132 -----~d~~~l~~~i~--------~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~---~~ 195 (389)
T 3acz_A 132 -----SDVEKVKAAWK--------PNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPLE---LG 195 (389)
T ss_dssp -----TCHHHHHHTCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGG---TT
T ss_pred -----CCHHHHHHhcC--------CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCccc---cC
Confidence 25777877664 25899999999999999999985 567899999999999998765212444 58
Q ss_pred CcEEEEcccccCCCCCCc--eEEEEEeC-CCccccc
Q 002866 355 PDFIITSFYRVFGFDPTG--FGCLLIKK-SVMGSLQ 387 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtG--vG~LyVRk-~~i~~L~ 387 (872)
+|+++.|+||+||+ |.+ .|++++++ ++++.+.
T Consensus 196 ~di~~~S~sK~~~~-~~~~~~G~v~~~~~~~~~~l~ 230 (389)
T 3acz_A 196 ADIALHSVSKYING-HGDVIGGVSSAKTAEDIATIK 230 (389)
T ss_dssp CSEEEEETTTTTTC-SSCCCCEEEEESSHHHHHHHH
T ss_pred CeEEEECChhhccC-CCCceeEEEEECcHHHHHHHH
Confidence 99999999999988 767 69999998 7666554
No 82
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.60 E-value=5.9e-15 Score=161.61 Aligned_cols=169 Identities=12% Similarity=0.040 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd 275 (872)
...+++|++||+++|++ .++++.++++|+.+++.++ +++|++|++... .|.+.. .|...++..|++++.++.+
T Consensus 62 ~~~~~l~~~ia~~~g~~----~~i~~~~g~~ai~~~~~~l-~~~gd~Vl~~~~-~y~~~~~~~~~~~~~~g~~~~~v~~~ 135 (404)
T 1e5e_A 62 PTVSNLEGKIAFLEKTE----ACVATSSGMGAIAATVLTI-LKAGDHLISDEC-LYGCTHALFEHALTKFGIQVDFINTA 135 (404)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEESC-CCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred hHHHHHHHHHHHHhCCC----cEEEeCChHHHHHHHHHHH-hCCCCEEEEeCC-CchhHHHHHHHHHHHcCCEEEEECCC
Confidence 45678999999999984 3677777789999999887 578999887643 344443 3444567789999998864
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHH-CCcEEEeeccccCCCCCccCCCCCC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQ-NHWHVLLDAGSLGPKDMDSLGLSLF 353 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are-~G~~VLVDAAQ~aG~~mipLDLs~l 353 (872)
+.++|+++|.. +|++|.++..+|.||.++|++ +++.|++ +|+++++|.++..+....++ .+
T Consensus 136 ------d~~~l~~~i~~--------~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~---~~ 198 (404)
T 1e5e_A 136 ------IPGEVKKHMKP--------NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPV---DF 198 (404)
T ss_dssp ------STTHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGG---GG
T ss_pred ------CHHHHHHhcCC--------CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcc---cc
Confidence 46778777742 589999999999999999998 4567899 99999999999877521233 35
Q ss_pred CCcEEEEcccccCCCCCCc--eEEEEEeCCCcc-cccCC
Q 002866 354 RPDFIITSFYRVFGFDPTG--FGCLLIKKSVMG-SLQNQ 389 (872)
Q Consensus 354 ~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~-~L~P~ 389 (872)
++|+++.|++|+||+ |.+ .|+++++++.+. .+.+.
T Consensus 199 ~~di~~~S~sK~~~~-~g~ri~G~~~~~~~~~~~~l~~~ 236 (404)
T 1e5e_A 199 GVDVVVHSATKYING-HTDVVAGLICGKADLLQQIRMVG 236 (404)
T ss_dssp TCSEEEEETTTTTTC-SSCCCCEEEEECHHHHHHHHHTC
T ss_pred CCEEEEEcCccccCC-CCCCeEEEEEECHHHHHHHHHHH
Confidence 899999999999997 666 699999998776 67654
No 83
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.59 E-value=7.7e-14 Score=148.82 Aligned_cols=211 Identities=9% Similarity=0.081 Sum_probs=149.5
Q ss_pred ceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHh------cCCCCCCCcEEEe
Q 002866 150 KVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDH------LNIPENEYGLVFT 222 (872)
Q Consensus 150 ~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~l------LgA~~dEY~VVFT 222 (872)
.++|+.+... +.++.+++++.+ .+.........|+.+. ..+.|++||++ ++++++ .|+||
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~-------~~~~~~~~~~~y~~~~----~~~l~~~la~~l~~~~g~~~~~~--~v~~~ 98 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVA-------TVDKIATELNRYPERD----AVELRDELAAYITKQTGVAVTRD--NLWAA 98 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHH-------HHHHHGGGTTSCCCTT----CHHHHHHHHHHHHHHHCCCCCGG--GEEEE
T ss_pred ceeccCCCCCCCCCHHHHHHHHH-------HHHhcccccccCCCcc----HHHHHHHHHHhhhhcccCCCChH--hEEEC
Confidence 4788877654 356777777543 1221100112344332 14788899998 566655 59999
Q ss_pred CCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCc
Q 002866 223 VSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 223 snATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
+|+|+|+++++.++ .++|++|++... .|.++ ...++..|+++..+|.+. +..++.++|++++... ++
T Consensus 99 ~G~~~al~~~~~~l-~~~gd~Vl~~~~-~y~~~---~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~-------~~ 165 (369)
T 3cq5_A 99 NGSNEILQQLLQAF-GGPGRTALGFQP-SYSMH---PILAKGTHTEFIAVSRGA-DFRIDMDVALEEIRAK-------QP 165 (369)
T ss_dssp SHHHHHHHHHHHHH-CSTTCEEEEEES-SCTHH---HHHHHHTTCEEEEEECCT-TSSCCHHHHHHHHHHH-------CC
T ss_pred CChHHHHHHHHHHh-cCCCCEEEEcCC-ChHHH---HHHHHHcCCEEEEecCCc-CCCCCHHHHHHHhhcc-------CC
Confidence 99999999999887 478899876632 34433 334566899999999864 4568999999988641 37
Q ss_pred eEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCC-ccCCC-CCCC-CcEEEEcccccCCCCCCc--eEEE
Q 002866 303 GLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDM-DSLGL-SLFR-PDFIITSFYRVFGFDPTG--FGCL 376 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~m-ipLDL-s~l~-~DFlv~S~HK~fG~~PtG--vG~L 376 (872)
++|.+++.+|.||.++|++.+ +.++..++++++|.++..+... ..+++ ...+ .++++.|++|+||. .| +|++
T Consensus 166 ~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~--~G~r~G~~ 243 (369)
T 3cq5_A 166 DIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDF--AGGRLGYF 243 (369)
T ss_dssp SEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSC--GGGCCEEE
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCC--cccceEEE
Confidence 888899999999999999855 5668888999999998755310 11222 2345 67999999999984 36 6999
Q ss_pred EEeCCCcccccC
Q 002866 377 LIKKSVMGSLQN 388 (872)
Q Consensus 377 yVRk~~i~~L~P 388 (872)
++++++++.+..
T Consensus 244 ~~~~~~~~~l~~ 255 (369)
T 3cq5_A 244 VANPAFIDAVML 255 (369)
T ss_dssp EECTHHHHHHHT
T ss_pred EeCHHHHHHHHH
Confidence 999887776654
No 84
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.59 E-value=3e-14 Score=152.44 Aligned_cols=214 Identities=13% Similarity=0.068 Sum_probs=148.7
Q ss_pred ceecccCCCC--CCcHHHHHHhhhcccccHHHHHHhhccCcCcCC-CchHHHHHHHHHHHHHhcCCCCCC-CcEEEeCCH
Q 002866 150 KVCLDYCGFG--LFSYIQTLHYWESSTFSLSEITANLSNHALYGG-AEKGTVEHDIKTRIMDHLNIPENE-YGLVFTVSR 225 (872)
Q Consensus 150 ~IYLDyAAtg--p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygN-psS~~~ieeARerIA~lLgA~~dE-Y~VVFTsnA 225 (872)
++.|..+... +.++.+++++.+ .+.... ...|+. +...+..+++++.+++++|++.+. ..|+||+|+
T Consensus 41 ~id~~~g~~~~~~~~~~v~~a~~~-------~~~~~~--~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~ 111 (407)
T 3nra_A 41 PVDFSHGDVDAHEPTPGAFDLFSA-------GVQSGG--VQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGT 111 (407)
T ss_dssp CEETTSCCTTTSCCCTTHHHHHHH-------HHHHTH--HHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHH
T ss_pred eeeecCcCCCCCCCcHHHHHHHHH-------HHhcCC--CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCc
Confidence 5677665544 355677776533 111110 012332 223467778888899999985311 259999999
Q ss_pred HHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-----CCCccCHHHHHHHHhhhhccCCCC
Q 002866 226 GSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW-----PTLKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 226 TeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~-----p~g~Id~edLe~~I~~~~rr~~~~ 300 (872)
|+|+.+++.++ +++|+.|++..- .|.+ +...++..|+++..+|++. .+..++.++|+++|..
T Consensus 112 ~~a~~~~~~~l-~~~gd~vl~~~~-~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------- 178 (407)
T 3nra_A 112 QGALFLAVAAT-VARGDKVAIVQP-DYFA---NRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-------- 178 (407)
T ss_dssp HHHHHHHHHTT-CCTTCEEEEEES-CCTH---HHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT--------
T ss_pred HHHHHHHHHHh-CCCCCEEEEcCC-cccc---hHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh--------
Confidence 99999999987 578999876532 3443 3345667899999999831 3567899999999863
Q ss_pred CceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccC----CCCCccCCCC-----CCCCcEEEEcccccCC
Q 002866 301 AAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLG----PKDMDSLGLS-----LFRPDFIITSFYRVFG 367 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~a----G~~mipLDLs-----~l~~DFlv~S~HK~fG 367 (872)
++++|++++.+|.||.++| ++ +++.|+++|+++++|.++.. |+. ...+. ..+.++++.|++|+||
T Consensus 179 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~--~~~~~~~~~~~~~~~i~~~s~sK~~g 256 (407)
T 3nra_A 179 GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGAS--YTHLRAEAAVDAENVVTIMGPSKTES 256 (407)
T ss_dssp TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCC--CCCGGGCTTSCGGGEEEEECSSSTTC
T ss_pred CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC--CCChhhcCcccCCcEEEEeCcccccC
Confidence 4789999999999999999 54 45678999999999999875 321 22222 2456799999999998
Q ss_pred CCCCceEEEEEeCCCccccc
Q 002866 368 FDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 368 ~~PtGvG~LyVRk~~i~~L~ 387 (872)
.+..++|+++.++++++.+.
T Consensus 257 ~~G~r~G~~~~~~~~~~~l~ 276 (407)
T 3nra_A 257 LSGYRLGVAFGSRAIIARME 276 (407)
T ss_dssp CGGGCCEEEEECHHHHHHHH
T ss_pred CCeeeEEEEEcCHHHHHHHH
Confidence 31234799888777665554
No 85
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.59 E-value=2.7e-14 Score=152.68 Aligned_cols=210 Identities=10% Similarity=0.080 Sum_probs=147.2
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----CC--CCCCCcEEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----NI--PENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----gA--~~dEY~VVF 221 (872)
++++|+.+...+ .++.+.+++.+ .+ ... ...|+.+. ...+.|++|++++ |+ +++ ..|+|
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~-~~~--~~~y~~~~---g~~~l~~~la~~l~~~~g~~~~~~-~~v~~ 96 (386)
T 1u08_A 31 QAINLSQGFPDFDGPRYLQERLAH-------HV-AQG--ANQYAPMT---GVQALREAIAQKTERLYGYQPDAD-SDITV 96 (386)
T ss_dssp TCEECCCSSCSSCCCHHHHHHHHH-------HH-HTT--CCSCCCTT---CCHHHHHHHHHHHHHHHSCCCCTT-TTEEE
T ss_pred CeEEecCCCCCCCCCHHHHHHHHH-------HH-Hhh--ccCCCCCC---CCHHHHHHHHHHHHHHhCCCCCCC-CCEEE
Confidence 578999887653 56777776432 11 110 12343321 1346777777774 74 443 15999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSA 301 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~ 301 (872)
|+|+|+|+.+++.++ .++|++|++..- .|.... ..++..|+++..+|++..+..++.++|+++|.. +
T Consensus 97 ~~g~~~a~~~~~~~~-~~~gd~vl~~~p-~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~--------~ 163 (386)
T 1u08_A 97 TAGATEALYAAITAL-VRNGDEVICFDP-SYDSYA---PAIALSGGIVKRMALQPPHFRVDWQEFAALLSE--------R 163 (386)
T ss_dssp ESSHHHHHHHHHHHH-CCTTCEEEEEES-CCTTHH---HHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCT--------T
T ss_pred cCChHHHHHHHHHHh-CCCCCEEEEeCC-CchhHH---HHHHHcCCEEEEeecCcccCcCCHHHHHHhhcc--------c
Confidence 999999999999987 578999876532 334333 345668999999998754456899999887742 5
Q ss_pred ceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC----CCCCccC-CCC-CCCCcEEEEcccccCCCCCC
Q 002866 302 AGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG----PKDMDSL-GLS-LFRPDFIITSFYRVFGFDPT 371 (872)
Q Consensus 302 T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a----G~~mipL-DLs-~l~~DFlv~S~HK~fG~~Pt 371 (872)
+++|.+++.+|.||.++|.+ +++.|+++|+++++|.++.. |....++ .+. ..+.|+++.|+||+|| +.
T Consensus 164 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~--~~ 241 (386)
T 1u08_A 164 TRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYH--MT 241 (386)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTT--CG
T ss_pred CEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcC--Cc
Confidence 88999999999999999863 34667899999999999865 3211122 221 2478999999999998 45
Q ss_pred c--eEEEEEeCCCccccc
Q 002866 372 G--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 372 G--vG~LyVRk~~i~~L~ 387 (872)
| +|+++++++.++.+.
T Consensus 242 G~r~G~~~~~~~~~~~l~ 259 (386)
T 1u08_A 242 GWKVGYCVAPAPISAEIR 259 (386)
T ss_dssp GGCCEEEECCHHHHHHHH
T ss_pred ccceEEEEcCHHHHHHHH
Confidence 8 899999887666554
No 86
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.59 E-value=1.3e-14 Score=158.18 Aligned_cols=159 Identities=10% Similarity=-0.004 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGaeV~~Vpvd 275 (872)
..++++|++||+++|++ .++||+|+|+|+++++.++ +++|++|++... .|.++. .+...+++.|+++..++++
T Consensus 66 ~~~~~l~~~la~~~g~~----~~~~~~sGt~A~~~al~~~-~~~gd~Vi~~~~-~y~~~~~~~~~~~~~~g~~~~~v~~~ 139 (392)
T 3qhx_A 66 PTRTALEAALAAVEDAA----FGRAFSSGMAAADCALRAM-LRPGDHVVIPDD-AYGGTFRLIDKVFTGWNVEYTPVALA 139 (392)
T ss_dssp HHHHHHHHHHHHHTTCS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEETT-CCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred hHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEeCC-CcchHHHHHHHHHHhcCcEEEEeCCC
Confidence 34678999999999985 3899999999999999877 678999887643 444443 3334457789999998764
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR 354 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~ 354 (872)
+.++|+++|.. +|++|.++..+|.||.++|++. .+.|+++|+++++|.+|+.+. ..+.-.++
T Consensus 140 ------d~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~---~~~~~~~~ 202 (392)
T 3qhx_A 140 ------DLDAVRAAIRP--------TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPA---LQQPLSLG 202 (392)
T ss_dssp ------CHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTT---TCCGGGGT
T ss_pred ------CHHHHHHhhCC--------CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccc---cCChHHhC
Confidence 57888887742 5899999999999999999985 567899999999999998764 23334568
Q ss_pred CcEEEEcccccCCCCCCc---eEEEEEeC
Q 002866 355 PDFIITSFYRVFGFDPTG---FGCLLIKK 380 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtG---vG~LyVRk 380 (872)
+|+++.|+||++|+ .| .|+++.++
T Consensus 203 ~di~~~S~sK~lg~--~g~~~~G~v~~~~ 229 (392)
T 3qhx_A 203 ADVVLHSTTKYIGG--HSDVVGGALVTND 229 (392)
T ss_dssp CSEEEEETTTTTTC--SSCCCCEEEEESC
T ss_pred CcEEEEcCccccCC--CCCceEEEEEECc
Confidence 99999999999995 45 78887764
No 87
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.59 E-value=4.8e-15 Score=158.30 Aligned_cols=190 Identities=14% Similarity=0.046 Sum_probs=137.3
Q ss_pred eecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHH
Q 002866 151 VCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAF 229 (872)
Q Consensus 151 IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeAL 229 (872)
.|+|++... ++++.+.+++.+ .+.. ..|+ +. ..+.+.|+++|+++|++ .++||+|+|+|+
T Consensus 3 ~~~~~~~~~~~~~~~v~~a~~~-----------~~~~-~~~~-~~--~~~~~l~~~la~~~~~~----~~~~~~sGt~al 63 (367)
T 3nyt_A 3 EFIDLKNQQARIKDKIDAGIQR-----------VLRH-GQYI-LG--PEVTELEDRLADFVGAK----YCISCANGTDAL 63 (367)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHH-----------HHHH-CCCS-SC--HHHHHHHHHHHHHHTCS----EEEEESCHHHHH
T ss_pred CcccccccccccCHHHHHHHHH-----------HHhc-CCcc-CC--hHHHHHHHHHHHHhCCC----cEEEeCCHHHHH
Confidence 377777666 345555555321 1111 1232 22 45778999999999985 399999999999
Q ss_pred HHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeC
Q 002866 230 KLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPV 309 (872)
Q Consensus 230 nLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~ 309 (872)
.+++.++.+++|++|++.. ..|.++.. .++..|++++.++++..++.+++++|+++|. +++++|.
T Consensus 64 ~~al~~~~~~~gd~Vi~~~-~~~~~~~~---~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~--------~~~~~v~--- 128 (367)
T 3nyt_A 64 QIVQMALGVGPGDEVITPG-FTYVATAE---TVALLGAKPVYVDIDPRTYNLDPQLLEAAIT--------PRTKAII--- 128 (367)
T ss_dssp HHHHHHTTCCTTCEEEEES-SSCTHHHH---HHHHTTCEEEEECBCTTTCSBCGGGTGGGCC--------TTEEEEC---
T ss_pred HHHHHHhCCCCcCEEEECC-CccHHHHH---HHHHcCCEEEEEecCCccCCcCHHHHHHhcC--------cCCcEEE---
Confidence 9999998778999988763 34555443 3456799999999987657889998887774 2577776
Q ss_pred ccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCCC--cEEEEcc--cccCCCCCCceEEEEEe
Q 002866 310 QSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP--DFIITSF--YRVFGFDPTGFGCLLIK 379 (872)
Q Consensus 310 vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~--DFlv~S~--HK~fG~~PtGvG~LyVR 379 (872)
.+|.+|...|++ +.+.|+++|+++++|++|+.|. .++....+. |++++|| ||++| +.|.|.+++.
T Consensus 129 ~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~---~~~~~~~~~~~di~~~Sf~~~K~l~--~~g~gg~~~~ 198 (367)
T 3nyt_A 129 PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGA---SYKGKRSCNLSTVACTSFFPSAPLG--CYGDGGAIFT 198 (367)
T ss_dssp CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTC---EETTEETTSSSSEEEEECCTTSSSC--CSSCCEEEEE
T ss_pred eeCCccChhhHHHHHHHHHHcCCEEEEECccccCC---eECCeeccCCCCEEEEECCCCCcCC--CcCceeEEEe
Confidence 678999999998 4567899999999999998775 233333344 9999996 89998 4454444443
No 88
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.58 E-value=3.7e-14 Score=151.20 Aligned_cols=208 Identities=12% Similarity=0.068 Sum_probs=143.2
Q ss_pred CceecccCCCC----CCcHHHHHHhhhcccccHHHHHHhhcc--CcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCGFG----LFSYIQTLHYWESSTFSLSEITANLSN--HALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAtg----p~p~~VieA~~e~~~F~ls~i~~nL~~--~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+..|+|.++.. +.++.+++++.+ .+...... ...|.. .......++|++|++++|++ .++|+
T Consensus 38 g~~~id~~~~~~~~~~~~~~v~~a~~~-------~~~~~~~~~~~~~~~~-g~~~~~~~l~~~la~~~g~~----~~i~~ 105 (384)
T 1bs0_A 38 DRQYLNFSSNDYLGLSHHPQIIRAWQQ-------GAEQFGIGSGGSGHVS-GYSVVHQALEEELAEWLGYS----RALLF 105 (384)
T ss_dssp TEEEEECSCCCTTSGGGCHHHHHHHHH-------HHHHHCSCCCSBTTTT-CCCHHHHHHHHHHHHHHTCS----EEEEE
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHH-------HHHHhCCCCCCcCccc-CChHHHHHHHHHHHHHhCCC----cEEEe
Confidence 45688988854 255777776533 12111000 001110 11256789999999999984 26667
Q ss_pred CCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCc
Q 002866 223 VSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 223 snATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
.++|+|+.+++..+ .++|+.|++.. ..|.++.. .++..|+++..+|. ++.++|+++|.+. .+++
T Consensus 106 ~sGt~a~~~~~~~~-~~~gd~v~~~~-~~~~~~~~---~~~~~g~~~~~~~~------~d~~~l~~~l~~~-----~~~~ 169 (384)
T 1bs0_A 106 ISGFAANQAVIAAM-MAKEDRIAADR-LSHASLLE---AASLSPSQLRRFAH------NDVTHLARLLASP-----CPGQ 169 (384)
T ss_dssp SCHHHHHHHHHHHH-CCTTCEEEEET-TCCHHHHH---HHHTSSSEEEEECT------TCHHHHHHHHHSC-----CSSC
T ss_pred CCcHHHHHHHHHHh-CCCCcEEEEcc-cccHHHHH---HHHHcCCCEEEeCC------CCHHHHHHHHHhc-----CCCC
Confidence 77799999988887 46888887663 34555443 34557999988773 3688999888642 1247
Q ss_pred eEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCC---Ccc-CCCCCCCCcEEEEcccccCCCCCCceEEEE
Q 002866 303 GLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKD---MDS-LGLSLFRPDFIITSFYRVFGFDPTGFGCLL 377 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~---mip-LDLs~l~~DFlv~S~HK~fG~~PtGvG~Ly 377 (872)
++|.++..+|.||.++|++ +++.|+++|+++++|.++..+.- ..+ .+.-..++|+++.|+||+|| |.| |+++
T Consensus 170 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--~~G-G~~~ 246 (384)
T 1bs0_A 170 QMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFG--VSG-AAVL 246 (384)
T ss_dssp EEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTS--SCC-EEEE
T ss_pred eEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhh--ccC-cEEE
Confidence 8999999999999999997 55778999999999999875530 001 11111368999999999998 678 9999
Q ss_pred EeCCCccccc
Q 002866 378 IKKSVMGSLQ 387 (872)
Q Consensus 378 VRk~~i~~L~ 387 (872)
++++.++.+.
T Consensus 247 ~~~~~~~~l~ 256 (384)
T 1bs0_A 247 CSSTVADYLL 256 (384)
T ss_dssp ECHHHHHHHH
T ss_pred eCHHHHHHHH
Confidence 9887665553
No 89
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.58 E-value=6.5e-15 Score=159.11 Aligned_cols=202 Identities=15% Similarity=0.128 Sum_probs=142.1
Q ss_pred CceecccCCCC----CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc------CCCCCCCc
Q 002866 149 PKVCLDYCGFG----LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL------NIPENEYG 218 (872)
Q Consensus 149 ~~IYLDyAAtg----p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL------gA~~dEY~ 218 (872)
.+++|+.+..+ +.++.+++++.+ .+... ...|+.+. ...+.|+.||+++ +++++ .
T Consensus 39 ~~i~l~~~~~~~~~~~~~~~v~~a~~~-------~~~~~---~~~y~~~~---g~~~l~~~la~~l~~~~g~~~~~~--~ 103 (406)
T 1xi9_A 39 KVIRLNIGDPVKFDFQPPEHMKEAYCK-------AIKEG---HNYYGDSE---GLPELRKAIVEREKRKNGVDITPD--D 103 (406)
T ss_dssp CCEECCCCCGGGTTCCCCHHHHHHHHH-------HHHTT---CCSCCCTT---CCHHHHHHHHHHHHHHHCCCCCGG--G
T ss_pred CEEEecCCCCCcCCCCCCHHHHHHHHH-------HHhcC---CCCCCCCC---CcHHHHHHHHHHHHHhcCCCCCHH--H
Confidence 47899988873 356677776432 12111 11344331 2346888888887 45554 6
Q ss_pred EEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-CCCccCHHHHHHHHhhhhccC
Q 002866 219 LVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW-PTLKLCSTDLRKQISSKKRRK 297 (872)
Q Consensus 219 VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~-p~g~Id~edLe~~I~~~~rr~ 297 (872)
|+||+|+|+|+.+++.++ +++|++|++..- .|.+ +...++..|+++..+|++. .+..++.++|+++|..
T Consensus 104 v~~t~g~~~al~~~~~~l-~~~gd~Vl~~~~-~~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----- 173 (406)
T 1xi9_A 104 VRVTAAVTEALQLIFGAL-LDPGDEILVPGP-SYPP---YTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD----- 173 (406)
T ss_dssp EEEESHHHHHHHHHHHHH-CCTTCEEEEEES-CCHH---HHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT-----
T ss_pred EEEcCChHHHHHHHHHHh-CCCCCEEEEcCC-CCcc---HHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc-----
Confidence 999999999999999987 578999876632 3443 3345567899999999864 2345789999888752
Q ss_pred CCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccCCCC-CccCCCCC--CCC-cEEEEcccccCCCC
Q 002866 298 KDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLGPKD-MDSLGLSL--FRP-DFIITSFYRVFGFD 369 (872)
Q Consensus 298 ~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~aG~~-mipLDLs~--l~~-DFlv~S~HK~fG~~ 369 (872)
++++|.+++.+|.||.++| ++ +++.|+++|+++++|.++..... .....+.. .+. |+++.|+||+||
T Consensus 174 ---~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-- 248 (406)
T 1xi9_A 174 ---RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYF-- 248 (406)
T ss_dssp ---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTC--
T ss_pred ---CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccC--
Confidence 4889999999999999998 54 45678999999999999865320 00122322 355 899999999998
Q ss_pred CCc--eEEEE--EeC
Q 002866 370 PTG--FGCLL--IKK 380 (872)
Q Consensus 370 PtG--vG~Ly--VRk 380 (872)
+.| +|+++ .++
T Consensus 249 ~~G~r~G~~~~~~~~ 263 (406)
T 1xi9_A 249 ATGWRLGYMYFVDPE 263 (406)
T ss_dssp CGGGCCEEEEEECTT
T ss_pred CCccEEEEEEEecCc
Confidence 457 89999 666
No 90
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.58 E-value=4.3e-15 Score=155.96 Aligned_cols=211 Identities=9% Similarity=0.021 Sum_probs=142.5
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAF 229 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeAL 229 (872)
+||||++..+++++.+++++.+ .......|+.. ....+.|++||+++|++ .++||.|+|+|+
T Consensus 5 ~i~~~~~~~~~p~~~~~~a~~~-----------~~~~~~~y~~~---~~~~~l~~~la~~~g~~----~~~~~~~gt~a~ 66 (347)
T 1jg8_A 5 MIDLRSDTVTKPTEEMRKAMAQ-----------AEVGDDVYGED---PTINELERLAAETFGKE----AALFVPSGTMGN 66 (347)
T ss_dssp CEECSCGGGCCCCHHHHHHHHT-----------CCCCCGGGTCC---HHHHHHHHHHHHHHTCS----EEEEESCHHHHH
T ss_pred EEEeccccCCCCCHHHHHHHhc-----------CCCCCcccCCC---hHHHHHHHHHHHHhCCc----eEEEecCcHHHH
Confidence 6899999999877777776422 11111124322 24568999999999984 378999999998
Q ss_pred HHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeC
Q 002866 230 KLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPV 309 (872)
Q Consensus 230 nLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~ 309 (872)
.+++.++ .++||+|++.. ..|.+.......++..|+++..+ .+. ++.++.++|+++|.... ...++|++|.++.
T Consensus 67 ~~~~~~~-~~~gd~Vl~~~-~~~~~~~~~~~~~~~~g~~~~~v-~~~-~~~~d~~~l~~~i~~~~--~~~~~~~~v~~~~ 140 (347)
T 1jg8_A 67 QVSIMAH-TQRGDEVILEA-DSHIFWYEVGAMAVLSGVMPHPV-PGK-NGAMDPDDVRKAIRPRN--IHFPRTSLIAIEN 140 (347)
T ss_dssp HHHHHHH-CCTTCEEEEET-TCHHHHSSTTHHHHHTCCEEEEE-CEE-TTEECHHHHHHHSCCSC--TTSCCEEEEEEES
T ss_pred HHHHHHh-cCCCCEEEEcC-cchhhhccccchhhccCeEEEEe-cCC-CCccCHHHHHHHhcccc--ccccCceEEEEec
Confidence 8887776 47899988763 34444322122345579999887 443 46689999988885310 0012589999999
Q ss_pred ccCcc-cchhcHH----HHHHHHHCCcEEEeeccccCCC-CCccCCCCC--CCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 310 QSRVT-GAKYSYQ----WMALAQQNHWHVLLDAGSLGPK-DMDSLGLSL--FRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 310 vSNvT-G~i~PLe----~I~~Are~G~~VLVDAAQ~aG~-~mipLDLs~--l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
.+|+| |+++|++ +++.|+++|+++++|++|..+. .....++.. ..+|.+++|+||++|. |.| |+++.+++
T Consensus 141 ~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~-~~G-~~~~~~~~ 218 (347)
T 1jg8_A 141 THNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCA-PVG-SVVVGDRD 218 (347)
T ss_dssp SBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCC-SSC-EEEEECHH
T ss_pred cccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCC-Cce-EEEEcCHH
Confidence 99999 9999974 3466799999999999874310 000122221 2689999999999997 654 34555555
Q ss_pred Ccccc
Q 002866 382 VMGSL 386 (872)
Q Consensus 382 ~i~~L 386 (872)
.++.+
T Consensus 219 ~~~~~ 223 (347)
T 1jg8_A 219 FIERA 223 (347)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54433
No 91
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.58 E-value=3.9e-14 Score=152.01 Aligned_cols=169 Identities=14% Similarity=0.112 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
...+++++.+++++|++ .|+||+|+|+|+.+++.++ .++|+.|++.. ..|.+... .++..|+++..+|.
T Consensus 88 ~~~~~l~~~la~~~g~~----~v~~~~ggt~a~~~~~~~~-~~~gd~V~~~~-p~~~~~~~---~~~~~g~~~~~v~~-- 156 (398)
T 3a2b_A 88 DIHVELEEKLSAYVGKE----AAILFSTGFQSNLGPLSCL-MGRNDYILLDE-RDHASIID---GSRLSFSKVIKYGH-- 156 (398)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHS-SCTTCEEEEET-TCCHHHHH---HHHHSSSEEEEECT--
T ss_pred HHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEECC-ccCHHHHH---HHHHcCCceEEeCC--
Confidence 67789999999999973 4999999999999999998 57899988763 34565543 35567999988875
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCC-CCccCCCCC-C
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPK-DMDSLGLSL-F 353 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~-~mipLDLs~-l 353 (872)
++.++|++++.... ..++++|.+++.+|.||.++|++ +++.|+++|+++++|.++..+. +.....+.. +
T Consensus 157 ----~d~~~l~~~l~~~~----~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 228 (398)
T 3a2b_A 157 ----NNMEDLRAKLSRLP----EDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHF 228 (398)
T ss_dssp ----TCHHHHHHHHHTSC----SSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHH
T ss_pred ----CCHHHHHHHHHhhc----cCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhc
Confidence 47889998886421 11588999999999999999997 4577899999999999986542 000122211 1
Q ss_pred ----CCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 354 ----RPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 354 ----~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++|+++.|+||+|| |.| |+++++++.++.+.
T Consensus 229 ~~~~~~di~~~s~sK~~~--~~G-G~~~~~~~~~~~l~ 263 (398)
T 3a2b_A 229 GLNDDVDLIMGTFSKSLA--SLG-GFVAGDADVIDFLK 263 (398)
T ss_dssp TCGGGCSEEEEESSSTTC--SSC-EEEEECHHHHHHHH
T ss_pred CCCcCCeEEEeccccccc--CCC-cEEEeCHHHHHHHH
Confidence 37999999999999 778 99999887665553
No 92
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.58 E-value=5.6e-14 Score=150.65 Aligned_cols=209 Identities=12% Similarity=0.078 Sum_probs=144.9
Q ss_pred CCceecccCCCCCC----cHHHHHHhhhcccccHHHHHHhhccCcCcCCCch----HHHHHHHHHHHHHhcCCCCCCCcE
Q 002866 148 SPKVCLDYCGFGLF----SYIQTLHYWESSTFSLSEITANLSNHALYGGAEK----GTVEHDIKTRIMDHLNIPENEYGL 219 (872)
Q Consensus 148 ~~~IYLDyAAtgp~----p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS----~~~ieeARerIA~lLgA~~dEY~V 219 (872)
++..|+|.++..++ ++.+++++.+ .+. ... ..++.... .....++|++||+++|++ + .
T Consensus 43 ~g~~~id~~~~~~~g~~~~~~v~~a~~~-------~~~-~~~--~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~---~ 108 (401)
T 1fc4_A 43 DGSHVINFCANNYLGLANHPDLIAAAKA-------GMD-SHG--FGMASVRFICGTQDSHKELEQKLAAFLGME-D---A 108 (401)
T ss_dssp TSCEEEECCCSCTTSCTTCHHHHHHHHH-------HHH-HHC--SCCCSCHHHHCCBHHHHHHHHHHHHHHTCS-E---E
T ss_pred CCccEEEeeccCcccccCCHHHHHHHHH-------HHH-HhC--CCCCCCCcccCCcHHHHHHHHHHHHHhCCC-c---E
Confidence 34678888777654 5777776532 111 110 01111111 256789999999999986 2 5
Q ss_pred EEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCC
Q 002866 220 VFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKD 299 (872)
Q Consensus 220 VFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~ 299 (872)
+|+.++|+|+.+++..+ .++|+.|++.. ..|.++.. .++..|+++..++. ++.++|+++|..... ..
T Consensus 109 i~~~sGs~a~~~~~~~~-~~~gd~v~~~~-~~~~~~~~---~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~--~~ 175 (401)
T 1fc4_A 109 ILYSSCFDANGGLFETL-LGAEDAIISDA-LNHASIID---GVRLCKAKRYRYAN------NDMQELEARLKEARE--AG 175 (401)
T ss_dssp EEESCHHHHHHTTHHHH-CCTTCEEEEET-TCCHHHHH---HHHTSCSEEEEECT------TCHHHHHHHHHHHHH--TT
T ss_pred EEeCChHHHHHHHHHHH-cCCCCEEEEcc-hhHHHHHH---HHHHcCCceEEECC------CCHHHHHHHHHHhhc--cC
Confidence 56667788999888776 57888887663 34554433 35667999887762 367899888864211 11
Q ss_pred CCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc--------CCCCCCCCcEEEEcccccCCCCC
Q 002866 300 SAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS--------LGLSLFRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip--------LDLs~l~~DFlv~S~HK~fG~~P 370 (872)
.++++|.+++.+|.||.++|++ +++.|+++|+++++|.+++.+.. .+ +++.. ++|+++.|+||+|++ |
T Consensus 176 ~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~-~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~-~ 252 (401)
T 1fc4_A 176 ARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV-GENGRGSHEYCDVMG-RVDIITGTLGKALGG-A 252 (401)
T ss_dssp CSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTS-STTSCCHHHHTTCTT-CCSEEEEESSSTTCS-S
T ss_pred CCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECccccccc-CCCCCccHHHcCCCc-CCcEEEecchhhccC-C
Confidence 1478999999999999999997 45778999999999999975531 11 55543 689999999999954 5
Q ss_pred CceEEEEEeCCCccccc
Q 002866 371 TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 371 tGvG~LyVRk~~i~~L~ 387 (872)
.| |+++++++.++.+.
T Consensus 253 ~g-G~~~~~~~~~~~l~ 268 (401)
T 1fc4_A 253 SG-GYTAARKEVVEWLR 268 (401)
T ss_dssp SC-EEEEECHHHHHHHH
T ss_pred CC-EEEEcCHHHHHHHH
Confidence 57 99999887766554
No 93
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.57 E-value=1.8e-14 Score=150.79 Aligned_cols=210 Identities=11% Similarity=0.048 Sum_probs=146.2
Q ss_pred CceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhcc-CcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSN-HALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~-~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
.++||+++..++.++.+++++.+ .+.. ...|+. ....+++|+.+++++| . +..|+||+|+|+
T Consensus 8 ~~id~~~~~~~~~~~~v~~a~~~-----------~~~~~~~~~~~---~~~~~~l~~~la~~~g-~--~~~v~~~~~gt~ 70 (356)
T 1v72_A 8 PALGFSSDNIAGASPEVAQALVK-----------HSSGQAGPYGT---DELTAQVKRKFCEIFE-R--DVEVFLVPTGTA 70 (356)
T ss_dssp CCCBCSCGGGCCCCHHHHHHHHH-----------TTSSCCCSTTC---SHHHHHHHHHHHHHHT-S--CCEEEEESCHHH
T ss_pred ceEeeccCCccCCCHHHHHHHHh-----------hccCccccccc---chHHHHHHHHHHHHhC-C--CCcEEEeCCccH
Confidence 47899999888888888887543 1111 012332 2567889999999999 3 235999999999
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHc--CcEEEEEeccCCCCccCHHHHHH-HHhhhhccCCCCCceE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEK--GAKVYSAWFKWPTLKLCSTDLRK-QISSKKRRKKDSAAGL 304 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~Akrk--GaeV~~Vpvd~p~g~Id~edLe~-~I~~~~rr~~~~~T~L 304 (872)
|+.+++..+ .++|+.|++.. ..|.+.... ..++.. |++++.+|.+ ++.++.++|++ +|..... ...+++++
T Consensus 71 a~~~al~~~-~~~gd~vi~~~-~~~~~~~~~-~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~~i~~~~~-~~~~~~~~ 144 (356)
T 1v72_A 71 ANALCLSAM-TPPWGNIYCHP-ASHINNDEC-GAPEFFSNGAKLMTVDGP--AAKLDIVRLRERTREKVGD-VHTTQPAC 144 (356)
T ss_dssp HHHHHHHTS-CCTTEEEEECT-TSHHHHSST-THHHHHTTSCEEEECCCG--GGCCCHHHHHHHTTSSTTC-TTSCEEEE
T ss_pred HHHHHHHHh-cCCCCEEEEcC-ccchhhhhc-hHHHHHhCCcEEEEecCC--CCeEcHHHHHHHhhhcchh-hccCCceE
Confidence 999998886 46888888763 334443211 013334 8999988875 35789999988 7753100 01125889
Q ss_pred EEEeCccCcccchhcH---H-HHHHHHHCCcEEEeeccccC------CCCCccCCCC--CCCCcEEEEcccccCCCCCCc
Q 002866 305 FVFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSLG------PKDMDSLGLS--LFRPDFIITSFYRVFGFDPTG 372 (872)
Q Consensus 305 Va~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~a------G~~mipLDLs--~l~~DFlv~S~HK~fG~~PtG 372 (872)
|.+++.+| ||.++|. + +++.|+++|+++++|+++.. +. +.+.- ..++|++++|+||+ |+ |.|
T Consensus 145 v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~~~~~d~~~~s~sK~-g~-~~G 218 (356)
T 1v72_A 145 VSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGC---SPAEMTWKAGVDALSFGATKN-GV-LAA 218 (356)
T ss_dssp EEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTC---CTTTTTGGGTCCEEEECCGGG-TC-SSC
T ss_pred EEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCC---CHHHhhhhhcCCEEEEecccC-CC-cCc
Confidence 99998776 9996654 4 34677999999999999752 22 22211 13689999999999 77 899
Q ss_pred eEEEEEeCCCccccc
Q 002866 373 FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 vG~LyVRk~~i~~L~ 387 (872)
.|+++.+++.++.+.
T Consensus 219 ~g~~~~~~~~~~~~~ 233 (356)
T 1v72_A 219 EAIVLFNTSLATEMS 233 (356)
T ss_dssp EEEEESSGGGHHHHH
T ss_pred cEEEEECHHHHhhHH
Confidence 999998887765543
No 94
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.57 E-value=2.1e-14 Score=157.57 Aligned_cols=168 Identities=15% Similarity=0.142 Sum_probs=127.8
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHHHHHcCcE
Q 002866 190 YGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQSAKEKGAK 268 (872)
Q Consensus 190 ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~AkrkGae 268 (872)
|+||. ..+.|++||+++|++ ..|+|++| ++|+.+++. + +++|++|++... .|.++. .+...++..|++
T Consensus 64 ~~~p~----~~~l~~~la~~~g~~---~~i~~~sG-~~ai~~~~~-l-~~~gd~Vl~~~~-~y~~~~~~~~~~~~~~G~~ 132 (403)
T 3cog_A 64 SGNPT----RNCLEKAVAALDGAK---YCLAFASG-LAATVTITH-L-LKAGDQIICMDD-VYGGTNRYFRQVASEFGLK 132 (403)
T ss_dssp --CHH----HHHHHHHHHHHHTCS---EEEEESCH-HHHHHHHHT-T-SCTTCEEEEESS-CCHHHHHHHHHTGGGGTCE
T ss_pred CCCch----HHHHHHHHHHHhCCC---cEEEECCH-HHHHHHHHH-H-hCCCCEEEEeCC-CcchHHHHHHHHHHHcCCE
Confidence 45554 468999999999986 24776665 699999998 6 678999887643 455443 344456778999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCC-cEEEeeccccCCCCCc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNH-WHVLLDAGSLGPKDMD 346 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G-~~VLVDAAQ~aG~~mi 346 (872)
++.++.+ +.++|+++|. ++|++|.+...+|.||.++|++. ++.|+++| +++++|.++..+....
T Consensus 133 v~~v~~~------d~~~l~~~i~--------~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~ 198 (403)
T 3cog_A 133 ISFVDCS------KIKLLEAAIT--------PETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQR 198 (403)
T ss_dssp EEEECTT------SHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCC
T ss_pred EEEECCC------CHHHHHHhcC--------cCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCC
Confidence 9998764 5778877764 25899999999999999999984 56789999 9999999998774213
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCce--EEEEEeC-CCcccc
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTGF--GCLLIKK-SVMGSL 386 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtGv--G~LyVRk-~~i~~L 386 (872)
+++ +++|+++.|+||+||+ |.|+ |++++++ ++++.|
T Consensus 199 ~~~---~~~div~~S~sK~~~g-~~~~~~G~v~~~~~~l~~~l 237 (403)
T 3cog_A 199 PLA---LGADISMYSATKYMNG-HSDVVMGLVSVNCESLHNRL 237 (403)
T ss_dssp TTT---TTCSEEEEETTTTTTC-SSCCCCEEEEECCHHHHHHH
T ss_pred ccc---cCCeEEEEcChhhccC-CCCCeEEEEEECcHHHHHHH
Confidence 554 5899999999999998 7774 9998863 444443
No 95
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.57 E-value=1.8e-14 Score=154.15 Aligned_cols=162 Identities=10% Similarity=0.064 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.++|++||+++|++ +.|+||+| |+|+++++.++..++|++|++.. ..|.++. ..++..|++++.++++.
T Consensus 38 ~~~~~l~~~la~~~~~~---~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~-~~~~~~~---~~~~~~g~~~~~v~~~~ 109 (388)
T 1b9h_A 38 DEVNSFEREFAAHHGAA---HALAVTNG-THALELALQVMGVGPGTEVIVPA-FTFISSS---QAAQRLGAVTVPVDVDA 109 (388)
T ss_dssp SHHHHHHHHHHHHTTCS---EEEEESCH-HHHHHHHHHHTTCCTTCEEEEES-SSCTHHH---HHHHHTTCEEEEECBCT
T ss_pred HHHHHHHHHHHHHhCCC---eEEEeCCH-HHHHHHHHHHcCCCCcCEEEECC-CccHHHH---HHHHHcCCEEEEEecCC
Confidence 35678999999999985 24666655 99999999998667899988763 3455554 34566899999999986
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc--CCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS--LGLSLF 353 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip--LDLs~l 353 (872)
.++.++.++|+++|.. +|++|+ .+|.||.+.|++ +++.|+++|+++++|++|+.|. .. .++..+
T Consensus 110 ~~~~~d~~~l~~~i~~--------~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~--~~~~~~~~~~ 176 (388)
T 1b9h_A 110 ATYNLDPEAVAAAVTP--------RTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGA--RWQGKRVGEL 176 (388)
T ss_dssp TTCCBCHHHHHHHCCT--------TEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTC--EETTEEGGGS
T ss_pred CcCCCCHHHHHHhcCc--------CceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCC--ccCCeecccc
Confidence 5577899999888742 477777 688999999997 4567899999999999998765 22 345555
Q ss_pred C-CcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 354 R-PDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 354 ~-~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
+ ++++++|.||++++ +. .|+++.++.
T Consensus 177 ~~i~~~S~s~~K~l~g-~~-~G~~~~~~~ 203 (388)
T 1b9h_A 177 DSIATFSFQNGKLMTA-GE-GGAVVFPDG 203 (388)
T ss_dssp SSCEEEECCTTSSSCS-SS-CEEEEECTT
T ss_pred cceEEEEccCCCcccC-CC-eEEEEECCH
Confidence 5 77777778899875 54 587777765
No 96
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.57 E-value=3.3e-14 Score=151.04 Aligned_cols=222 Identities=9% Similarity=0.050 Sum_probs=152.4
Q ss_pred HHHHHhhcccCCCCceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC--C
Q 002866 136 IDQLRANEYLHLSPKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN--I 212 (872)
Q Consensus 136 ID~lR~~EFP~L~~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg--A 212 (872)
++..-.++|. -.+.++|..+... +.|+.+++++.+ ..... ...|+. ...+..+++++.+++++| +
T Consensus 21 ~~d~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~--------~~~~~--~~~y~~-~~~~~~~~l~~~l~~~~g~~~ 88 (391)
T 4dq6_A 21 KWSEMEKKYG-TNDLLPMWVADMDFKAAPCIIDSLKN--------RLEQE--IYGYTT-RPDSYNESIVNWLYRRHNWKI 88 (391)
T ss_dssp HHHCHHHHHS-CSCSEECCSSSCSSCCCHHHHHHHHH--------HHTTC--CCCCBC-CCHHHHHHHHHHHHHHHCCCC
T ss_pred eeeecccccC-CCCceeccccCCCCCCCHHHHHHHHH--------HHhCC--CCCCCC-CCHHHHHHHHHHHHHHhCCCC
Confidence 3433334564 2347888877655 345777776432 11110 112322 225678889999999999 5
Q ss_pred CCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc-CCC--CccCHHHHHHH
Q 002866 213 PENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK-WPT--LKLCSTDLRKQ 289 (872)
Q Consensus 213 ~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd-~p~--g~Id~edLe~~ 289 (872)
+++ .|+||+|+|+|+++++.++ +++|++|++..- .|.+. ...++..|+++..+|++ +.. ..++.++|+++
T Consensus 89 ~~~--~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~~-~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~ 161 (391)
T 4dq6_A 89 KSE--WLIYSPGVIPAISLLINEL-TKANDKIMIQEP-VYSPF---NSVVKNNNRELIISPLQKLENGNYIMDYEDIENK 161 (391)
T ss_dssp CGG--GEEEESCHHHHHHHHHHHH-SCTTCEEEECSS-CCTHH---HHHHHHTTCEEEECCCEECTTSCEECCHHHHHHH
T ss_pred cHH--HeEEcCChHHHHHHHHHHh-CCCCCEEEEcCC-CCHHH---HHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHH
Confidence 555 5999999999999999987 578999887632 33333 34556789999999987 322 34789999887
Q ss_pred HhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC----CCCCccCCCCCCCCc-----
Q 002866 290 ISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG----PKDMDSLGLSLFRPD----- 356 (872)
Q Consensus 290 I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a----G~~mipLDLs~l~~D----- 356 (872)
|. . +++|++++.+|.||.++|.+ +++.|+++|+++++|.++.. |+ ....+..+.+|
T Consensus 162 l~--------~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~ 230 (391)
T 4dq6_A 162 IK--------D-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH--KHIPMASISKEFEKNT 230 (391)
T ss_dssp CT--------T-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHHTE
T ss_pred hh--------c-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC--CccCHHHcCccccCcE
Confidence 74 2 88999999999999997654 34567999999999999875 32 23445555555
Q ss_pred EEEEcccccCCCCCCceEEEEEeC-CCccccc
Q 002866 357 FIITSFYRVFGFDPTGFGCLLIKK-SVMGSLQ 387 (872)
Q Consensus 357 Flv~S~HK~fG~~PtGvG~LyVRk-~~i~~L~ 387 (872)
+++.|++|+||.+..++|++++++ ++.+.+.
T Consensus 231 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~ 262 (391)
T 4dq6_A 231 ITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLD 262 (391)
T ss_dssp EEEECSHHHHTCGGGCCEEEECCSHHHHHHHH
T ss_pred EEEEechhhccCcccceEEEEeCCHHHHHHHH
Confidence 999999999983123478888776 5555443
No 97
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.56 E-value=2.8e-14 Score=154.34 Aligned_cols=210 Identities=15% Similarity=0.042 Sum_probs=145.8
Q ss_pred CceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----CCC--CCCCcEEE
Q 002866 149 PKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----NIP--ENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----gA~--~dEY~VVF 221 (872)
++++|+.+... +.++.+.+++.+ .+ ... ...|+.+. ...+.|++||+++ |++ ++ ..|+|
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~-~~~--~~~y~~~~---g~~~l~~~la~~~~~~~g~~~~~~-~~v~~ 91 (411)
T 2o0r_A 26 GAVNLGQGFPDEDGPPKMLQAAQD-------AI-AGG--VNQYPPGP---GSAPLRRAIAAQRRRHFGVDYDPE-TEVLV 91 (411)
T ss_dssp TCEESSCSSCSSCCCHHHHHHHHH-------HH-HTT--CCSCCCTT---CCHHHHHHHHHHHHHHHCCCCCTT-TSEEE
T ss_pred CeeeccCcCCCCCCCHHHHHHHHH-------HH-hcC--CCCCCCCC---CCHHHHHHHHHHHHHHcCCCCCCC-ceEEE
Confidence 47899888766 356677776432 12 110 12343321 1245777777776 753 43 15999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC--CCccCHHHHHHHHhhhhccCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP--TLKLCSTDLRKQISSKKRRKKD 299 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p--~g~Id~edLe~~I~~~~rr~~~ 299 (872)
|+|+|+|+.+++.++ .++|++|++... .|.++. ..++..|+++..+|++.. ++.++.++|+++|..
T Consensus 92 t~g~~~al~~~~~~~-~~~gd~Vl~~~~-~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~------- 159 (411)
T 2o0r_A 92 TVGATEAIAAAVLGL-VEPGSEVLLIEP-FYDSYS---PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTP------- 159 (411)
T ss_dssp EEHHHHHHHHHHHHH-CCTTCEEEEEES-CCTTHH---HHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCT-------
T ss_pred eCCHHHHHHHHHHHh-cCCCCEEEEeCC-CcHhHH---HHHHHcCCEEEEeeccccccCCCCCHHHHHHhhcc-------
Confidence 999999999999987 578999876532 334443 345668999999998642 345889999887742
Q ss_pred CCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCCC--CccCCCCC----CCCcEEEEcccccCCCC
Q 002866 300 SAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPKD--MDSLGLSL----FRPDFIITSFYRVFGFD 369 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~~--mipLDLs~----l~~DFlv~S~HK~fG~~ 369 (872)
++++|.++..+|.||.++|.+ +++.|+++|+++++|.++..... ..+..+.. .++|+++.|+||+||
T Consensus 160 -~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~-- 236 (411)
T 2o0r_A 160 -RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFN-- 236 (411)
T ss_dssp -TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTT--
T ss_pred -CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcC--
Confidence 588999999999999999963 34677999999999999875310 01122322 468999999999998
Q ss_pred CCc--eEEEEEeCCCccccc
Q 002866 370 PTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 370 PtG--vG~LyVRk~~i~~L~ 387 (872)
+.| +|++++++++++.+.
T Consensus 237 ~~G~r~G~~~~~~~~~~~l~ 256 (411)
T 2o0r_A 237 CTGWKIGWACGPAELIAGVR 256 (411)
T ss_dssp CTTTCEEEEECCHHHHHHHH
T ss_pred CccceEEEEeeCHHHHHHHH
Confidence 458 999998877665543
No 98
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.56 E-value=7.5e-14 Score=149.04 Aligned_cols=211 Identities=14% Similarity=0.106 Sum_probs=143.5
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----CCCCCCCcEEEeC
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----NIPENEYGLVFTV 223 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----gA~~dEY~VVFTs 223 (872)
.+++|+.+...+ .|+.+.+++.+ .+... ...|+.+. ...+.|+.|++++ |++.+...|+||+
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~~~~---~~~y~~~~---g~~~l~~~la~~~~~~~g~~~~~~~v~~~~ 97 (388)
T 1j32_A 31 DVCSFSAGEPDFNTPKHIVEAAKA-------ALEQG---KTRYGPAA---GEPRLREAIAQKLQRDNGLCYGADNILVTN 97 (388)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHH-------HHHTT---CCSCCCTT---CCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred CEEECCCCCCCCCCCHHHHHHHHH-------HHhcC---CCCCCCCC---CCHHHHHHHHHHHHHhcCCCCChhhEEEcC
Confidence 367887776543 45667766432 11111 12344321 1235666666666 5432222699999
Q ss_pred CHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHHHhhhhccCCCCCc
Q 002866 224 SRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 224 nATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
|+|+|+.+++.++ +++|++|++... .|.++ ...++..|+++..+|.+.. +..++.++|+++|.. ++
T Consensus 98 g~~~a~~~~~~~~-~~~gd~vl~~~~-~~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--------~~ 164 (388)
T 1j32_A 98 GGKQSIFNLMLAM-IEPGDEVIIPAP-FWVSY---PEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP--------KT 164 (388)
T ss_dssp HHHHHHHHHHHHH-CCTTCEEEEESS-CCTHH---HHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT--------TE
T ss_pred CHHHHHHHHHHHh-cCCCCEEEEcCC-CChhH---HHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc--------Cc
Confidence 9999999999987 678999877632 34443 3445668999999998642 346789999887742 58
Q ss_pred eEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccCCCC--CccCCCCC-----CCCcEEEEcccccCCCCCC
Q 002866 303 GLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLGPKD--MDSLGLSL-----FRPDFIITSFYRVFGFDPT 371 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~aG~~--mipLDLs~-----l~~DFlv~S~HK~fG~~Pt 371 (872)
++|.+++.+|.||.++| ++ +++.|+++|+++++|.++....- .....+.. .+.|+++.|+||+|| +.
T Consensus 165 ~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~--~~ 242 (388)
T 1j32_A 165 KLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYA--MT 242 (388)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTT--CT
T ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccC--Cc
Confidence 89999999999999987 44 34677999999999999764310 00112222 457999999999998 45
Q ss_pred c--eEEEEEeCCCccccc
Q 002866 372 G--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 372 G--vG~LyVRk~~i~~L~ 387 (872)
| +|++++++++++.+.
T Consensus 243 G~r~G~~~~~~~~~~~l~ 260 (388)
T 1j32_A 243 GWRVGFLAGPVPLVKAAT 260 (388)
T ss_dssp TTCCEEEECCHHHHHHHH
T ss_pred ccceEEEEeCHHHHHHHH
Confidence 8 999999887665554
No 99
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.56 E-value=2.6e-14 Score=151.90 Aligned_cols=203 Identities=9% Similarity=0.103 Sum_probs=138.9
Q ss_pred ceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 150 KVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
+++|+.+...+ .++.+++++.+ .+.....|+.+ ...+.|++||+++|++++ .|+||+|+|+|
T Consensus 26 ~idl~~~~~~~~~~~~v~~a~~~-----------~~~~~~~y~~~----~~~~l~~~la~~~~~~~~--~v~~~~g~~~a 88 (364)
T 1lc5_A 26 LLDFSANINPLGMPVSVKRALID-----------NLDCIERYPDA----DYFHLHQALARHHQVPAS--WILAGNGETES 88 (364)
T ss_dssp SEECSSCCCTTCCCHHHHHHHHH-----------TGGGGGSCCCT----TCHHHHHHHHHHHTSCGG--GEEEESSHHHH
T ss_pred eEEeccccCCCCCCHHHHHHHHH-----------HHHHhhcCCCC----CHHHHHHHHHHHHCcCHH--HEEECCCHHHH
Confidence 67787765432 56677776432 11111234433 246899999999999765 59999999999
Q ss_pred HHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccC-HHHHHHHHhhhhccCCCCCceEEEE
Q 002866 229 FKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLC-STDLRKQISSKKRRKKDSAAGLFVF 307 (872)
Q Consensus 229 LnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id-~edLe~~I~~~~rr~~~~~T~LVa~ 307 (872)
+.+++..+ +|++|++... .|.. +...++..|+++..+|.+..+ .++ .+++.+.+ ++++++|.+
T Consensus 89 l~~~~~~~---~gd~vl~~~p-~y~~---~~~~~~~~g~~~~~v~~~~~~-~~~~l~~~~~~~--------~~~~~~v~i 152 (364)
T 1lc5_A 89 IFTVASGL---KPRRAMIVTP-GFAE---YGRALAQSGCEIRRWSLREAD-GWQLTDAILEAL--------TPDLDCLFL 152 (364)
T ss_dssp HHHHHHHH---CCSEEEEEES-CCTH---HHHHHHHTTCEEEEEECCGGG-TTCCCTTHHHHC--------CTTCCEEEE
T ss_pred HHHHHHHc---CCCeEEEeCC-CcHH---HHHHHHHcCCeEEEEeCCccc-ccchhHHHHHhc--------cCCCCEEEE
Confidence 99999988 5688776532 2232 334566789999999986421 123 23333322 235789999
Q ss_pred eCccCcccchhc---HH-HHHHHHHCCcEEEeeccccCCC--CCccCCC-CCCCCcEEEEcccccCCCCCCc--eEEEE-
Q 002866 308 PVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLGPK--DMDSLGL-SLFRPDFIITSFYRVFGFDPTG--FGCLL- 377 (872)
Q Consensus 308 p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~aG~--~mipLDL-s~l~~DFlv~S~HK~fG~~PtG--vG~Ly- 377 (872)
++.+|.||.++| ++ +++.|+++|+++++|.++.... ....+++ ...+.|+++.|++|+||. .| +|+++
T Consensus 153 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~--~G~r~G~~~~ 230 (364)
T 1lc5_A 153 CTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAI--PGLRLGYLVN 230 (364)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTC--TTTCCEEEEC
T ss_pred eCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcC--CccceEEEEE
Confidence 999999999999 54 4567899999999999986432 0012332 346789999999999983 36 69999
Q ss_pred EeCCCccccc
Q 002866 378 IKKSVMGSLQ 387 (872)
Q Consensus 378 VRk~~i~~L~ 387 (872)
.+++.++.+.
T Consensus 231 ~~~~~~~~l~ 240 (364)
T 1lc5_A 231 SDDAAMARMR 240 (364)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 7777666554
No 100
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.56 E-value=7.9e-15 Score=164.11 Aligned_cols=221 Identities=13% Similarity=0.084 Sum_probs=155.3
Q ss_pred HHHHhhcccCCCCceecccCCCCCCcHHHHHHhhhcccccHHHHHH-hhccCcCcCCCchHHHHHHHHHHHHHhcCCCCC
Q 002866 137 DQLRANEYLHLSPKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITA-NLSNHALYGGAEKGTVEHDIKTRIMDHLNIPEN 215 (872)
Q Consensus 137 D~lR~~EFP~L~~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~-nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~d 215 (872)
.++++ +|+.++..+++|+ ..|++++.+. . ... .......|+.+.. ..+..++++|+++|++.
T Consensus 29 ~~~~~-~~~~~~~i~~~n~-------~~Vl~a~~~~--~----~~~~~~~~~~gy~Y~~~--g~~~Le~~lA~l~g~e~- 91 (427)
T 3hvy_A 29 NDVEK-EFKYYDEIREYNQ-------LKVLKAFQEE--R----ISESHFTNSSGYGYNDI--GRDSLDRVYANIFNTES- 91 (427)
T ss_dssp HHHHH-HHHHHHHHHHHHH-------HHHHHHHHHT--T----CCGGGSCCCCTTCTTCH--HHHHHHHHHHHHHTCSE-
T ss_pred HHHHH-HHHHHHHHHHhhH-------HHHHHHHHHH--H----HHHHhcccCcCCCCCch--hHHHHHHHHHHHhCCCc-
Confidence 34454 6888877888886 5677764321 0 000 0000112222222 36788899999999853
Q ss_pred CCcEEE--eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHH--------HHHHHcCcEEEEEeccCCCCccCHHH
Q 002866 216 EYGLVF--TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMA--------QSAKEKGAKVYSAWFKWPTLKLCSTD 285 (872)
Q Consensus 216 EY~VVF--TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~--------~~AkrkGaeV~~Vpvd~p~g~Id~ed 285 (872)
.++| |+|+|+|+.+++.++ +++||+|++.....+.....+. ..++..|++++.++. +++.++.++
T Consensus 92 --alv~p~~~sGt~A~~~al~al-l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~--~~~~~d~e~ 166 (427)
T 3hvy_A 92 --AFVRPHFVNGTHAIGAALFGN-LRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL--KDGKVDINT 166 (427)
T ss_dssp --EEEETTCCSHHHHHHHHHHHT-CCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC--BTTBCCHHH
T ss_pred --eEEeCCCCcHHHHHHHHHHHh-cCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC--CCCCcCHHH
Confidence 4776 889999999999887 6899999877412333333332 334567999999887 357899999
Q ss_pred HHHHHhhhhccCCCCCceEEEEeC----ccCcccchhcHH-HHHHHHH--CCcEEEeeccccCCCCCccCCCCCCCCcEE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPV----QSRVTGAKYSYQ-WMALAQQ--NHWHVLLDAGSLGPKDMDSLGLSLFRPDFI 358 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~----vSNvTG~i~PLe-~I~~Are--~G~~VLVDAAQ~aG~~mipLDLs~l~~DFl 358 (872)
|+++|... ++|++|.+.. .+|.||.+.|++ +++.|++ +|+++++|.++..+. .....-..++|++
T Consensus 167 l~~~i~~~------~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~--~~~~p~~~gaDiv 238 (427)
T 3hvy_A 167 VKEELKKD------DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFV--EEKEPTDVGADII 238 (427)
T ss_dssp HHHHHHHC------TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTT--SSSCGGGGTCSEE
T ss_pred HHHHhhCC------CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccc--cCCCCcccCCeEE
Confidence 99999631 2589999999 899999999997 5567898 899999999987664 1122224579999
Q ss_pred EEcccccCCCC--CCceEEEEEeCCCcccccC
Q 002866 359 ITSFYRVFGFD--PTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 359 v~S~HK~fG~~--PtGvG~LyVRk~~i~~L~P 388 (872)
+.|+||++|+. |.| |+++.++++++.+..
T Consensus 239 ~~S~sK~lgg~g~~~G-G~i~~~~~li~~l~~ 269 (427)
T 3hvy_A 239 AGSLIKNIGGGIATTG-GYIAGKEEYVTQATF 269 (427)
T ss_dssp EEETTSGGGTTTCCSC-EEEEECHHHHHHHHH
T ss_pred EECCcccccccccceE-EEEEECHHHHHHHHH
Confidence 99999998841 333 889888888777654
No 101
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.55 E-value=3.7e-14 Score=153.98 Aligned_cols=212 Identities=11% Similarity=0.015 Sum_probs=145.9
Q ss_pred CceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhc-cCcCcCCCchHHHHHHHHHHHHHhc----CC--CCCCCcEE
Q 002866 149 PKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLS-NHALYGGAEKGTVEHDIKTRIMDHL----NI--PENEYGLV 220 (872)
Q Consensus 149 ~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~-~~~~ygNpsS~~~ieeARerIA~lL----gA--~~dEY~VV 220 (872)
.+|+|+++... +.++.+++++.+ ...... ....|+.+. ...+.|++||+++ |+ +++ ..|+
T Consensus 38 ~~i~l~~~~~~~~~~~~v~~a~~~--------~~~~~~~~~~~y~~~~---g~~~l~~~la~~l~~~~g~~~~~~-~~v~ 105 (429)
T 1yiz_A 38 KPLNLGQGFPDYHAPKYALNALAA--------AANSPDPLANQYTRGF---GHPRLVQALSKLYSQLVDRTINPM-TEVL 105 (429)
T ss_dssp CCEECCSSSCSSCCCHHHHHHHHH--------HHTCSCGGGGSCCCSS---CCHHHHHHHHHHHHHHHTSCCCTT-TSEE
T ss_pred CEEEecCCCCCCCCCHHHHHHHHH--------HHhccccCccCCCCCC---CcHHHHHHHHHHHHHHhCCCCCCc-CCEE
Confidence 47899988765 356777776432 111100 011343321 1246777777775 74 443 1599
Q ss_pred EeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC---------CCccCHHHHHHHHh
Q 002866 221 FTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP---------TLKLCSTDLRKQIS 291 (872)
Q Consensus 221 FTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p---------~g~Id~edLe~~I~ 291 (872)
||+|+|+|+.+++..+ .++|++|++..- .|.... ..++..|+++..+|++.. +..++.++|+++|.
T Consensus 106 ~~~g~~~a~~~~~~~~-~~~gd~Vl~~~p-~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 180 (429)
T 1yiz_A 106 VTVGAYEALYATIQGH-VDEGDEVIIIEP-FFDCYE---PMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN 180 (429)
T ss_dssp EESHHHHHHHHHHHHH-CCTTCEEEEEES-CCTTHH---HHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC
T ss_pred EecChHHHHHHHHHHh-cCCCCEEEEcCC-CchhHH---HHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc
Confidence 9999999999999987 468898876533 223332 345567999999998764 24578999988774
Q ss_pred hhhccCCCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccC----CCCCccC-CCC-CCCCcEEEEc
Q 002866 292 SKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLG----PKDMDSL-GLS-LFRPDFIITS 361 (872)
Q Consensus 292 ~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~a----G~~mipL-DLs-~l~~DFlv~S 361 (872)
+++++|.+++.+|.||.++| ++ +++.|+++|+++++|.++.. |....++ .+. ..++|+++.|
T Consensus 181 --------~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s 252 (429)
T 1yiz_A 181 --------EKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGS 252 (429)
T ss_dssp --------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEE
T ss_pred --------cCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEec
Confidence 25889999999999999997 44 45678999999999999864 2211122 232 3578999999
Q ss_pred ccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 362 FYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 362 ~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
++|+|| +.| +|++++++++++.+.
T Consensus 253 ~sK~~~--~~G~r~G~~~~~~~~~~~l~ 278 (429)
T 1yiz_A 253 AGKTFS--LTGWKIGWAYGPEALLKNLQ 278 (429)
T ss_dssp HHHHHT--CGGGCCEEEESCHHHHHHHH
T ss_pred chhccC--CCCcceEEEEeCHHHHHHHH
Confidence 999998 458 999999877665553
No 102
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.55 E-value=4.7e-14 Score=149.56 Aligned_cols=160 Identities=11% Similarity=0.065 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....+.|+++++++|++ .++||+|+|+|+.+++.++.+++|++|++.. ..|.++. ..++..|+++..++++
T Consensus 38 ~~~~~l~~~la~~~~~~----~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~-~~~~~~~---~~~~~~g~~~~~~~~~- 108 (374)
T 3uwc_A 38 AELEKFEKRFAALHNAP----HAIGVGTGTDALAMSFKMLNIGAGDEVITCA-NTFIASV---GAIVQAGATPVLVDSE- 108 (374)
T ss_dssp HHHHHHHHHHHHHTTCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEES-SSCHHHH---HHHHHTTCEEEEECBC-
T ss_pred hhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCCCEEEECC-CccHHHH---HHHHHcCCEEEEEecC-
Confidence 45678999999999985 4899999999999999998778899988763 3455443 3456789999999998
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCC-
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR- 354 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~- 354 (872)
.++.++.++|++++.. ++++|. .+|.||.+.|++. .+.|+++|+++++|++|..|. .++....+
T Consensus 109 ~~~~~d~~~l~~~~~~--------~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~---~~~~~~~~~ 174 (374)
T 3uwc_A 109 NGYVIDPEKIEAAITD--------KTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILG---RINDKFVGS 174 (374)
T ss_dssp TTSSBCGGGTGGGCCT--------TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTC---EETTEETTS
T ss_pred CCCCcCHHHHHHhCCC--------CceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCc---eeCCeeccc
Confidence 4677899988876642 477776 6789999999984 567899999999999998875 34544444
Q ss_pred -CcEEEEccc--ccCCCCCCceEEEEEeC
Q 002866 355 -PDFIITSFY--RVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 355 -~DFlv~S~H--K~fG~~PtGvG~LyVRk 380 (872)
+|++++|+| |++|+ +...|+++.++
T Consensus 175 ~~d~~~~s~~~~K~l~~-~g~~g~~~~~~ 202 (374)
T 3uwc_A 175 WGQFACFSLHPLKNLNV-WSDAGVIITHS 202 (374)
T ss_dssp SSSEEEEECSSSSSSCC-SSCCEEEEESC
T ss_pred cccEEEEeCCCCCcCCc-cceeEEEEeCC
Confidence 799999999 99984 23355555554
No 103
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.55 E-value=6.7e-14 Score=151.08 Aligned_cols=203 Identities=15% Similarity=0.110 Sum_probs=143.4
Q ss_pred CCceecccCC-----CCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC-----------
Q 002866 148 SPKVCLDYCG-----FGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN----------- 211 (872)
Q Consensus 148 ~~~IYLDyAA-----tgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg----------- 211 (872)
..+++|+.+. ..+.++.+++++.+ .+. .. ....|+.+ ....+.|++||++++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~-------~~~-~~-~~~~y~~~---~~~~~lr~~la~~~~~~~~~~~~~~~ 100 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKE-------AID-SQ-ECNGYFPT---VGSPEAREAVATWWRNSFVHKEELKS 100 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHH-------HHH-TT-CSSSCCCT---TCCHHHHHHHHHHHHHHHCCSTTTGG
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHH-------Hhh-CC-ccCCcCCC---CCCHHHHHHHHHHHHhhhcccccCCC
Confidence 3478999886 34567778777532 111 11 01124332 123578999999998
Q ss_pred -CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHH
Q 002866 212 -IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQ 289 (872)
Q Consensus 212 -A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~ 289 (872)
++++ .|+||+|+|+|+.+++.++ .++|++|++..- .|... ...++..|+++..+|++.. +..++.++|+++
T Consensus 101 ~~~~~--~v~~~~g~~~al~~~~~~l-~~~gd~vl~~~p-~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 173 (416)
T 1bw0_A 101 TIVKD--NVVLCSGGSHGILMAITAI-CDAGDYALVPQP-GFPHY---ETVCKAYGIGMHFYNCRPENDWEADLDEIRRL 173 (416)
T ss_dssp GCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEES-CCTHH---HHHHHHTTCEEEEEEEEGGGTTEECHHHHHHH
T ss_pred CCCcc--eEEEeCChHHHHHHHHHHh-CCCCCEEEEcCC-CcHhH---HHHHHHcCcEEEEeecCcccCCCCCHHHHHHH
Confidence 6665 5999999999999999987 578999876532 23333 3456678999999998642 245789999887
Q ss_pred HhhhhccCCCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccC----CC----CCccCCCCCC---C
Q 002866 290 ISSKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLG----PK----DMDSLGLSLF---R 354 (872)
Q Consensus 290 I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~a----G~----~mipLDLs~l---~ 354 (872)
+.. +++++++++.+|.||.++| ++ +++.|+++|+++++|.++.. |+ . ...+..+ +
T Consensus 174 l~~--------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~--~~~~~~~~~~~ 243 (416)
T 1bw0_A 174 KDD--------KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNAT--FTSVADFETTV 243 (416)
T ss_dssp CCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCC--CCCTTSSCCSC
T ss_pred hcc--------CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCC--ccCHHHccCCC
Confidence 742 4789999999999999999 65 45678999999999999765 22 1 1223322 3
Q ss_pred CcEEEEcccccCCCCCCc--eEEEEEeCC
Q 002866 355 PDFIITSFYRVFGFDPTG--FGCLLIKKS 381 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtG--vG~LyVRk~ 381 (872)
.++++.|++|+||. .| +|++++++.
T Consensus 244 ~~i~~~s~sK~~~~--~Glr~G~~~~~~~ 270 (416)
T 1bw0_A 244 PRVILGGTAKNLVV--PGWRLGWLLYVDP 270 (416)
T ss_dssp CEEEEEESTTTTSC--GGGCCEEEEEECT
T ss_pred cEEEEecchhhCCC--CCceEEEEEeeCc
Confidence 35788999999884 36 899998774
No 104
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.55 E-value=4.2e-14 Score=154.78 Aligned_cols=201 Identities=13% Similarity=0.081 Sum_probs=143.7
Q ss_pred ceecccCCCC-----CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC-----CCCCCCcE
Q 002866 150 KVCLDYCGFG-----LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN-----IPENEYGL 219 (872)
Q Consensus 150 ~IYLDyAAtg-----p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg-----A~~dEY~V 219 (872)
+|+|+.|... +.++.+++++.+ .+... ....|+.+ ....+.|++||++++ ++++ .|
T Consensus 56 ~i~l~~g~~~~~g~~~~~~~v~~a~~~-------~~~~~--~~~~y~~~---~g~~~lr~~la~~~~~~~~~~~~~--~v 121 (427)
T 3dyd_A 56 MISLSIGDPTVFGNLPTDPEVTQAMKD-------ALDSG--KYNGYAPS---IGFLSSREEIASYYHCPEAPLEAK--DV 121 (427)
T ss_dssp CEECCCSCTTTTSSSCCCHHHHHHHHH-------HHHHC--CSSSCCCT---TCCHHHHHHHHHHHCBTTBCCCGG--GE
T ss_pred EEeCCCcCCCccCCCCCCHHHHHHHHH-------HHhcC--cCCCCCCC---CCcHHHHHHHHHHHhhcCCCCChH--HE
Confidence 6999988854 567788777532 12211 01123322 224589999999999 6665 59
Q ss_pred EEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-CCCccCHHHHHHHHhhhhccCC
Q 002866 220 VFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW-PTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 220 VFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~-p~g~Id~edLe~~I~~~~rr~~ 298 (872)
+||+|+|+|+.+++..+ .++|++|++..- .+. .+...++..|+++..+|.+. .+..++.++|++.|..
T Consensus 122 ~~t~g~t~al~~~~~~l-~~~gd~vl~~~p-~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------ 190 (427)
T 3dyd_A 122 ILTSGCSQAIDLCLAVL-ANPGQNILVPRP-GFS---LYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE------ 190 (427)
T ss_dssp EEESSHHHHHHHHHHHH-CCTTCEEEEEES-CCT---HHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCT------
T ss_pred EEecCcHHHHHHHHHHh-cCCCCEEEEcCC-Cch---hHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc------
Confidence 99999999999999987 368999876532 222 33455677899999998853 2345788888776642
Q ss_pred CCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccC----CCCCccCCCCCCCCc---EEEEcccccCC
Q 002866 299 DSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLG----PKDMDSLGLSLFRPD---FIITSFYRVFG 367 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~a----G~~mipLDLs~l~~D---Flv~S~HK~fG 367 (872)
++++|++++.+|.||.++| ++ +++.|+++|+++++|.++.. +. ....+..+..| +++.|++|.||
T Consensus 191 --~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~--~~~~~~~~~~~~~vi~~~S~sK~~~ 266 (427)
T 3dyd_A 191 --KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDC--KYEPLATLSTDVPILSCGGLAKRWL 266 (427)
T ss_dssp --TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSC--CCCCGGGGCSSCCEEEEEESTTTSS
T ss_pred --CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCC--cCccHHHhCCCCcEEEEeeccccCC
Confidence 5889999999999999999 65 45678999999999999764 32 23344444544 67789999987
Q ss_pred CCCCc--eEEEEEeCC
Q 002866 368 FDPTG--FGCLLIKKS 381 (872)
Q Consensus 368 ~~PtG--vG~LyVRk~ 381 (872)
. .| +|++++++.
T Consensus 267 ~--~G~riG~~~~~~~ 280 (427)
T 3dyd_A 267 V--PGWRLGWILIHDR 280 (427)
T ss_dssp C--GGGCCEEEEEECS
T ss_pred C--cCcceEEEEecCc
Confidence 4 36 799988764
No 105
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.55 E-value=7e-15 Score=158.07 Aligned_cols=212 Identities=8% Similarity=0.013 Sum_probs=146.2
Q ss_pred CceecccCCCCC---CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCH
Q 002866 149 PKVCLDYCGFGL---FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSR 225 (872)
Q Consensus 149 ~~IYLDyAAtgp---~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnA 225 (872)
.+++|+.+...+ .++.+.+++.+ .+.........|+.+ ....+.|++||+++|++++ .|+||+|+
T Consensus 33 ~~i~l~~g~~~~~~~~~~~v~~a~~~-------~~~~~~~~~~~y~~~---~~~~~l~~~la~~~g~~~~--~v~~~~g~ 100 (397)
T 2zyj_A 33 GILSFAGGLPAPELFPKEEAAEAAAR-------ILREKGEVALQYSPT---EGYAPLRAFVAEWIGVRPE--EVLITTGS 100 (397)
T ss_dssp TCEEESSCCCCGGGCCHHHHHHHHHH-------HHHHHHHHHTSCCCT---TCCHHHHHHHHHHHTSCGG--GEEEESHH
T ss_pred CceecCCCCCCchhCCHHHHHHHHHH-------HHHhcchhhhCCCCC---CCCHHHHHHHHHHhCCChh--hEEEeccH
Confidence 478888776543 34556665432 111110001134432 1235799999999998765 59999999
Q ss_pred HHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEE
Q 002866 226 GSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLF 305 (872)
Q Consensus 226 TeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LV 305 (872)
|+|+.+++.++ .++|++|++..- .|.. +...++..|+++..+|.+. ++ ++.++|+++|... ++++|
T Consensus 101 ~~al~~~~~~~-~~~gd~Vl~~~p-~y~~---~~~~~~~~g~~~~~~~~~~-~~-~d~~~l~~~l~~~-------~~~~v 166 (397)
T 2zyj_A 101 QQALDLVGKVF-LDEGSPVLLEAP-SYMG---AIQAFRLQGPRFLTVPAGE-EG-PDLDALEEVLKRE-------RPRFL 166 (397)
T ss_dssp HHHHHHHHHHH-CCTTCEEEEEES-CCHH---HHHHHHTTCCEEEEEEEET-TE-ECHHHHHHHHHHC-------CCSCE
T ss_pred HHHHHHHHHHh-CCCCCEEEEeCC-CcHH---HHHHHHHcCCEEEecCcCC-CC-CCHHHHHHHHhhc-------CCeEE
Confidence 99999999987 468899876532 2333 3344566899999999875 33 8999999988641 36676
Q ss_pred -EEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCCC--CccCCCCCCCCc------EEEEcccccCCCCCCc
Q 002866 306 -VFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPKD--MDSLGLSLFRPD------FIITSFYRVFGFDPTG 372 (872)
Q Consensus 306 -a~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~~--mipLDLs~l~~D------Flv~S~HK~fG~~PtG 372 (872)
+++..+|.||.++|.+ +++.|+++|+++++|.++..... ..+.++..+++| +++.|+||+||+ -.+
T Consensus 167 ~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-G~r 245 (397)
T 2zyj_A 167 YLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSP-GLR 245 (397)
T ss_dssp EECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCG-GGC
T ss_pred EECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccc-cce
Confidence 6799999999999975 34567899999999999876320 012344444433 899999999982 235
Q ss_pred eEEEEEeCCCccccc
Q 002866 373 FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 vG~LyVRk~~i~~L~ 387 (872)
+|++++++++++.+.
T Consensus 246 ~G~~~~~~~~~~~l~ 260 (397)
T 2zyj_A 246 VAFAVAHPEALQKLV 260 (397)
T ss_dssp CEEEECCHHHHHHHH
T ss_pred eEEEecCHHHHHHHH
Confidence 799999877665553
No 106
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.55 E-value=2e-13 Score=146.32 Aligned_cols=210 Identities=11% Similarity=0.090 Sum_probs=144.2
Q ss_pred CceecccCCCC-CCcHHHHHHhhhcccccHHHHHHh-hccCcCcCCCchHHHHHHHHHHHHHhc----C--CCCCCCcEE
Q 002866 149 PKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITAN-LSNHALYGGAEKGTVEHDIKTRIMDHL----N--IPENEYGLV 220 (872)
Q Consensus 149 ~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~n-L~~~~~ygNpsS~~~ieeARerIA~lL----g--A~~dEY~VV 220 (872)
.++.|..+... +.++.+.+++.+ .+... ......|+.+. ...+.|++|++++ | ++++ .|+
T Consensus 36 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~~~~~~~~~~~y~~~~---g~~~lr~~la~~l~~~~g~~~~~~--~i~ 103 (398)
T 3ele_A 36 NVYDFSIGNPSIPAPQIVNDTIKE-------LVTDYDSVALHGYTSAQ---GDVETRAAIAEFLNNTHGTHFNAD--NLY 103 (398)
T ss_dssp GCEECCSCCCCSCCCHHHHHHHHH-------HHHHSCHHHHHSCCCTT---CCHHHHHHHHHHHHHHHCCCCCGG--GEE
T ss_pred CeEEeecCCCCCCCCHHHHHHHHH-------HHhcCCccccCCcCCCC---CcHHHHHHHHHHHHHHhCCCCChH--HEE
Confidence 36777766544 345677776432 12110 00001233221 1235666666665 4 5554 699
Q ss_pred EeCCHHHHHHHHHhhCCCCCC-CeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCC
Q 002866 221 FTVSRGSAFKLLAESYPFHTN-KKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKD 299 (872)
Q Consensus 221 FTsnATeALnLVaeslpf~~G-d~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~ 299 (872)
||+|+|+|+.+++..+ +++| ++|++..- .|. .+...++..|+++..+|++..+..++.++|++++..
T Consensus 104 ~~~g~~~al~~~~~~l-~~~g~d~vl~~~p-~~~---~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~------- 171 (398)
T 3ele_A 104 MTMGAAASLSICFRAL-TSDAYDEFITIAP-YFP---EYKVFVNAAGARLVEVPADTEHFQIDFDALEERINA------- 171 (398)
T ss_dssp EESSHHHHHHHHHHHH-CCSTTCEEEEESS-CCT---HHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCT-------
T ss_pred EccCHHHHHHHHHHHH-cCCCCCEEEEeCC-Cch---hhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCc-------
Confidence 9999999999999988 5789 89886532 233 334456778999999999865567899999887742
Q ss_pred CCceEEEEeCccCcccchhcHHH----HHHHHH------CCcEEEeeccccC----CCCCccCCCCCCCCcEEEEccccc
Q 002866 300 SAAGLFVFPVQSRVTGAKYSYQW----MALAQQ------NHWHVLLDAGSLG----PKDMDSLGLSLFRPDFIITSFYRV 365 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~PLe~----I~~Are------~G~~VLVDAAQ~a----G~~mipLDLs~l~~DFlv~S~HK~ 365 (872)
++++|.++..+|.||.++|.+. ++.|++ +|+++++|.++.. |. ..+......+.++++.|++|+
T Consensus 172 -~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~ 249 (398)
T 3ele_A 172 -HTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGI-KVPFVTKYYDNTLVCYSYSKS 249 (398)
T ss_dssp -TEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTC-CCCCGGGTCSSEEEEEESTTT
T ss_pred -CCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCC-CcCChHhhcCCeEEEEehhhc
Confidence 5899999999999999999653 356677 8999999999864 32 134444556778999999999
Q ss_pred CCCCCCceEEEEEeCCCcc
Q 002866 366 FGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 366 fG~~PtGvG~LyVRk~~i~ 384 (872)
||.+..++|+++++++.+.
T Consensus 250 ~~~~G~r~G~~~~~~~~~~ 268 (398)
T 3ele_A 250 LSLPGERIGYVLVPDEVYD 268 (398)
T ss_dssp SSCTTTCCEEEECCTTSTT
T ss_pred CCCccceeEEEEEcchhhh
Confidence 9832345899998887653
No 107
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.55 E-value=1.8e-14 Score=155.99 Aligned_cols=205 Identities=14% Similarity=0.138 Sum_probs=141.8
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhcc-CcCcCCCchHHHHHHHHHHHHHhcC------CCCCCCcEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSN-HALYGGAEKGTVEHDIKTRIMDHLN------IPENEYGLV 220 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~-~~~ygNpsS~~~ieeARerIA~lLg------A~~dEY~VV 220 (872)
.++||+.+...+ .++.+++++ + .+.. ...|+.+ ....+.|++||++++ ++++ .|+
T Consensus 44 ~~i~l~~~~~~~~~~~~v~~a~-~-----------~l~~~~~~y~~~---~g~~~l~~~la~~~~~~~g~~~~~~--~v~ 106 (409)
T 2gb3_A 44 RIHHLNIGQPDLKTPEVFFERI-Y-----------ENKPEVVYYSHS---AGIWELREAFASYYKRRQRVDVKPE--NVL 106 (409)
T ss_dssp EEEECSSCCCCSCCCTHHHHHH-H-----------HTCCSSCCCCCT---TCCHHHHHHHHHHHHHTSCCCCCGG--GEE
T ss_pred CEEeccCCCCCCCCCHHHHHHH-H-----------HHhcCCCCCCCC---CCcHHHHHHHHHHHHHHhCCCCCHH--HEE
Confidence 378999888763 556666654 3 1211 1123332 123468888888875 4444 599
Q ss_pred EeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-CCCccCHHHHHHHHhhhhccCCC
Q 002866 221 FTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW-PTLKLCSTDLRKQISSKKRRKKD 299 (872)
Q Consensus 221 FTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~-p~g~Id~edLe~~I~~~~rr~~~ 299 (872)
||+|+|+|+.+++.++ +++|++|++... .|.+. ...++..|+++..+|.+. .+..+ .++|+++|.
T Consensus 107 ~~~g~t~a~~~~~~~~-~~~gd~Vl~~~~-~~~~~---~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~-------- 172 (409)
T 2gb3_A 107 VTNGGSEAILFSFAVI-ANPGDEILVLEP-FYANY---NAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN-------- 172 (409)
T ss_dssp EESHHHHHHHHHHHHH-CCTTCEEEEEES-CCTHH---HHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCC--------
T ss_pred EeCCHHHHHHHHHHHh-CCCCCEEEEcCC-CchhH---HHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhC--------
Confidence 9999999999999987 578999876632 33333 334566799999999864 22333 666666553
Q ss_pred CCceEEEEeCccCcccchhcH---H-HHHHHHHCCcEEEeeccccCCCC---CccCCCCC-CCCcEEEEcccccCCCCCC
Q 002866 300 SAAGLFVFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSLGPKD---MDSLGLSL-FRPDFIITSFYRVFGFDPT 371 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~aG~~---mipLDLs~-l~~DFlv~S~HK~fG~~Pt 371 (872)
.++++|.+++.+|.||.++|. + +++.|+++|+++++|.++..+.. ..++ +.. .+.|+++.|+||+|| +.
T Consensus 173 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g--~~ 249 (409)
T 2gb3_A 173 ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA-LSIESDKVVVIDSVSKKFS--AC 249 (409)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG-GGSCCTTEEEEEESTTTTT--CG
T ss_pred cCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc-cccCCCCEEEEecchhccC--Cc
Confidence 258899999999999999874 3 34677999999999999875420 1122 333 367999999999998 45
Q ss_pred c--eEEEEEeC-CCccccc
Q 002866 372 G--FGCLLIKK-SVMGSLQ 387 (872)
Q Consensus 372 G--vG~LyVRk-~~i~~L~ 387 (872)
| +|++++++ ++++.+.
T Consensus 250 G~r~G~~~~~~~~l~~~l~ 268 (409)
T 2gb3_A 250 GARVGCLITRNEELISHAM 268 (409)
T ss_dssp GGCCEEEECSCHHHHHHHH
T ss_pred cceEEEEEECcHHHHHHHH
Confidence 7 89999988 6665553
No 108
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.54 E-value=1.7e-14 Score=162.29 Aligned_cols=165 Identities=12% Similarity=0.098 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-HHHHHHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-MAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+++++.+++++|++ .++++.|+|+|+.+++. + +++|++||+... .|.+... +...++..|++++.++.+
T Consensus 134 ~~~~l~~~la~~~g~~----~~i~~~sGt~al~~~l~-~-~~~Gd~Vi~~~~-~y~~~~~~~~~~~~~~G~~v~~v~~~- 205 (464)
T 1ibj_A 134 TRDALESLLAKLDKAD----RAFCFTSGMAALSAVTH-L-IKNGEEIVAGDD-VYGGSDRLLSQVVPRSGVVVKRVNTT- 205 (464)
T ss_dssp HHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHT-T-SCTTCEEEEESS-CCHHHHHHHHHTSGGGTCEEEEECTT-
T ss_pred HHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHH-H-hCCCCEEEEECC-CchhHHHHHHHHHHHcCCEEEEeCCC-
Confidence 5778999999999974 37888888999998886 3 578999887643 3444433 333456679999988753
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
+.++|+++|. ++|++|.+++.+|.||.++|++. ++.|+++|+++++|.+++.|....+++ +++
T Consensus 206 -----d~~~l~~~i~--------~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~---~~~ 269 (464)
T 1ibj_A 206 -----KLDEVAAAIG--------PQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE---LGA 269 (464)
T ss_dssp -----SHHHHHHHCC--------SSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG---TTC
T ss_pred -----CHHHHHHHhc--------cCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh---cCC
Confidence 5788887774 25899999999999999999984 567899999999999998875211443 589
Q ss_pred cEEEEcccccCCCCCCce--EEEEEeC-CCccccc
Q 002866 356 DFIITSFYRVFGFDPTGF--GCLLIKK-SVMGSLQ 387 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGv--G~LyVRk-~~i~~L~ 387 (872)
|+++.|+||+|++ |.|+ |++++++ .+++.+.
T Consensus 270 div~~S~sK~~~g-~~Gl~~G~l~~~~~~l~~~l~ 303 (464)
T 1ibj_A 270 DIVMHSATKFIAG-HSDVMAGVLAVKGEKLAKEVY 303 (464)
T ss_dssp SEEEEETTTTTTC-SSCCCCEEEEECSHHHHHHHH
T ss_pred EEEEECCcccccC-CCCCcEEEEEEChHHHHHHHH
Confidence 9999999999987 8887 9999986 5655554
No 109
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.54 E-value=4.8e-13 Score=146.44 Aligned_cols=167 Identities=15% Similarity=0.146 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....+.|+.|++++|++ .++|+.++|+|+..++..+ .++|+.|++. +..|.++... ++..|+++..++.
T Consensus 109 ~~~~~l~~~la~~~g~~----~~i~~~sGs~a~~~al~~l-~~~gd~vl~~-~~~h~~~~~~---~~~~g~~~~~~~~-- 177 (427)
T 2w8t_A 109 HDHMEVEQALRDFYGTT----GAIVFSTGYMANLGIISTL-AGKGEYVILD-ADSHASIYDG---CQQGNAEIVRFRH-- 177 (427)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHH-SCTTCEEEEE-TTCCHHHHHH---HHHSCSEEEEECT--
T ss_pred HHHHHHHHHHHHHhCCC----ceEEecCcHHHHHHHHHHh-cCCCCEEEEC-CcccHHHHHH---HHHcCCeeEEeCC--
Confidence 56788999999999984 3667777788988887776 5788988776 3456666433 4457898887762
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc--------
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS-------- 347 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip-------- 347 (872)
++.++|+++|.... ..++++|++.+++|+||.+.|++ +++.|+++|+++++|.++..+. ..
T Consensus 178 ----~d~~~le~~l~~~~----~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~--~~~~g~~~~~ 247 (427)
T 2w8t_A 178 ----NSVEDLDKRLGRLP----KEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGF--FGPNGRGVYE 247 (427)
T ss_dssp ----TCHHHHHHHHHTSC----SSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTT--SSTTSCCHHH
T ss_pred ----CCHHHHHHHHHhcc----CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccc--cCCCCCchHh
Confidence 47899999886421 12589999999999999999997 4567899999999999998764 22
Q ss_pred -CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 348 -LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 348 -LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+++.. ++|+++.|+||+|| +.| |+++.++++++.+.+
T Consensus 248 ~~~~~~-~~di~~~s~sK~~g--~~g-G~v~~~~~l~~~l~~ 285 (427)
T 2w8t_A 248 AQGLEG-QIDFVVGTFSKSVG--TVG-GFVVSNHPKFEAVRL 285 (427)
T ss_dssp HTTCTT-CCSEEEEESSSTTC--SCC-EEEEECCTTGGGGGG
T ss_pred hcCCCc-CCcEEEecchhhhc--cCC-CEEEeCHHHHHHHHH
Confidence 55533 78999999999998 567 999999888877653
No 110
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.54 E-value=4.4e-14 Score=149.63 Aligned_cols=211 Identities=9% Similarity=0.053 Sum_probs=145.7
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC--CCCCCCcEEEeCCH
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN--IPENEYGLVFTVSR 225 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg--A~~dEY~VVFTsnA 225 (872)
.++.|..+.... .|+.+++++.+ .+ ... ...|+.+ ..+..+++++.+++++| ++++ .|+||+|+
T Consensus 25 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~-~~~--~~~y~~~-~~~~~~~l~~~l~~~~g~~~~~~--~v~~~~g~ 91 (383)
T 3kax_A 25 ELIHAWIADMDFEVPQPIQTALKK-------RI-EHP--IFGYTLP-PENIGDIICNWTKKQYNWDIQKE--WIVFSAGI 91 (383)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHH-------HH-HSC--CCCCCCC-CTTHHHHHHHHHHHHHCCCCCGG--GEEEESCH
T ss_pred CeeecccccCCCCCCHHHHHHHHH-------HH-hcC--CCCCCCC-CHHHHHHHHHHHHHHhCCCCChh--hEEEcCCH
Confidence 367777665443 46777776432 11 110 1123333 34567788888888888 5554 69999999
Q ss_pred HHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC--CccCHHHHHHHHhhhhccCCCCCce
Q 002866 226 GSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT--LKLCSTDLRKQISSKKRRKKDSAAG 303 (872)
Q Consensus 226 TeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~--g~Id~edLe~~I~~~~rr~~~~~T~ 303 (872)
|+|+++++.++ +++|++|++.. ..|.+ +...++..|+++..+|+++.+ ..++.++|+++|.. +++
T Consensus 92 ~~a~~~~~~~l-~~~gd~vl~~~-~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~ 158 (383)
T 3kax_A 92 VPALSTSIQAF-TKENESVLVQP-PIYPP---FFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ--------GVK 158 (383)
T ss_dssp HHHHHHHHHHH-CCTTCEEEECS-SCCHH---HHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT--------TCC
T ss_pred HHHHHHHHHHh-CCCCCEEEEcC-CCcHH---HHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc--------CCe
Confidence 99999999987 57899988763 23333 345567789999999886422 24799999998832 588
Q ss_pred EEEEeCccCcccchhcHHHH----HHHHHCCcEEEeeccccC----CCCCccCCCCCC-----CCcEEEEcccccCCCCC
Q 002866 304 LFVFPVQSRVTGAKYSYQWM----ALAQQNHWHVLLDAGSLG----PKDMDSLGLSLF-----RPDFIITSFYRVFGFDP 370 (872)
Q Consensus 304 LVa~p~vSNvTG~i~PLe~I----~~Are~G~~VLVDAAQ~a----G~~mipLDLs~l-----~~DFlv~S~HK~fG~~P 370 (872)
+|.+++.+|.||.++|.+.+ +.|+++|+++++|.++.. |+ ....+..+ +.++++.|++|.||.+.
T Consensus 159 ~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (383)
T 3kax_A 159 LMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADH--THTPFASLSEELAARTITCMAPSKTFNIAG 236 (383)
T ss_dssp EEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHTTEEEEECSHHHHTCGG
T ss_pred EEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCC--CceeHhhcCccccCcEEEEEEChhhccCcc
Confidence 99999999999999997633 457899999999999865 32 12334333 44599999999998312
Q ss_pred CceEEEEE-eCCCccccc
Q 002866 371 TGFGCLLI-KKSVMGSLQ 387 (872)
Q Consensus 371 tGvG~LyV-Rk~~i~~L~ 387 (872)
.++|++++ ++++.+.+.
T Consensus 237 ~r~G~~~~~~~~~~~~~~ 254 (383)
T 3kax_A 237 LQASIIIIPNEKLRQAFT 254 (383)
T ss_dssp GCCEEEECCCHHHHHHHH
T ss_pred hhheEEEeCCHHHHHHHH
Confidence 34788877 455555443
No 111
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.54 E-value=4e-13 Score=143.77 Aligned_cols=205 Identities=10% Similarity=0.010 Sum_probs=140.2
Q ss_pred CCceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHH-HHHHHHHhc----C--CCCCCCcE
Q 002866 148 SPKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHD-IKTRIMDHL----N--IPENEYGL 219 (872)
Q Consensus 148 ~~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~iee-ARerIA~lL----g--A~~dEY~V 219 (872)
+.+++|..+... +.|+.+++++.+ ..... ...|+.+ ..+ .|++||+++ | ++++ .|
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~--------~~~~~--~~~y~~~-----~~~~lr~~la~~l~~~~g~~~~~~--~v 90 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQ--------RLMHG--VFGYSRW-----KNDEFLAAIAHWFSTQHYTAIDSQ--TV 90 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHH--------HHTTC--CCCCCCS-----CCHHHHHHHHHHHHHHSCCCCCGG--GE
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHH--------HHhCC--CCCCCCC-----ChHHHHHHHHHHHHHhcCCCCCHH--HE
Confidence 457888777654 355777776432 11110 1134333 345 788888876 6 5554 59
Q ss_pred EEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC--CccCHHHHHHHHhhhhccC
Q 002866 220 VFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT--LKLCSTDLRKQISSKKRRK 297 (872)
Q Consensus 220 VFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~--g~Id~edLe~~I~~~~rr~ 297 (872)
+||+|+|+|+.+++.++ .++|++|++..- .|. .+...++..|+++..+|++..+ ..++.++|+++|..
T Consensus 91 ~~t~g~~~al~~~~~~l-~~~gd~vl~~~p-~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~----- 160 (390)
T 1d2f_A 91 VYGPSVIYMVSELIRQW-SETGEGVVIHTP-AYD---AFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK----- 160 (390)
T ss_dssp EEESCHHHHHHHHHHHS-SCTTCEEEEEES-CCH---HHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS-----
T ss_pred EEcCCHHHHHHHHHHHh-cCCCCEEEEcCC-CcH---HHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhcc-----
Confidence 99999999999999998 468899876532 233 3344566789999999987532 24789999988853
Q ss_pred CCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccCCCC--CccCCCCCCCC---cEEEEcccccCCC
Q 002866 298 KDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLGPKD--MDSLGLSLFRP---DFIITSFYRVFGF 368 (872)
Q Consensus 298 ~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~aG~~--mipLDLs~l~~---DFlv~S~HK~fG~ 368 (872)
.++++|.++..+|.||.++| ++ +++.|+++|+++++|.++..... ....++..+.+ |. +.|++|+||
T Consensus 161 --~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~- 236 (390)
T 1d2f_A 161 --PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFN- 236 (390)
T ss_dssp --TTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHT-
T ss_pred --CCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhc-
Confidence 24889999999999999999 44 45678999999999999875210 01334444433 77 999999998
Q ss_pred CCCc--eEEEEEe-CCCcc
Q 002866 369 DPTG--FGCLLIK-KSVMG 384 (872)
Q Consensus 369 ~PtG--vG~LyVR-k~~i~ 384 (872)
+.| +|+++++ +++++
T Consensus 237 -~~G~r~G~~~~~~~~~~~ 254 (390)
T 1d2f_A 237 -IPALTGAYGIIENSSSRD 254 (390)
T ss_dssp -CGGGCCEEEEECSHHHHH
T ss_pred -ccChhheEEEECCHHHHH
Confidence 346 6999985 34443
No 112
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.54 E-value=1.3e-13 Score=146.85 Aligned_cols=210 Identities=10% Similarity=0.030 Sum_probs=143.7
Q ss_pred ceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----CCCCCCC-cEEEeC
Q 002866 150 KVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----NIPENEY-GLVFTV 223 (872)
Q Consensus 150 ~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----gA~~dEY-~VVFTs 223 (872)
++.|..+...+ .++.+.+++.+ ..... ....|+. .....+.|++||+++ |++.+.. .|+||+
T Consensus 27 ~idl~~~~~~~~~~~~v~~a~~~--------~~~~~-~~~~y~~---~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~ 94 (376)
T 2dou_A 27 LIDLSIGSTDLPPPEAPLKALAE--------ALNDP-TTYGYCL---KSCTLPFLEEAARWYEGRYGVGLDPRREALALI 94 (376)
T ss_dssp CEECSSCCCCCCCCHHHHHHHHH--------HTTCG-GGSSCCC---HHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEES
T ss_pred EEeccCCCCCCCCCHHHHHHHHH--------HHhCC-CcCCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcC
Confidence 67777665543 45667666432 11100 0112332 234678999999998 8752212 599999
Q ss_pred CHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCce
Q 002866 224 SRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAG 303 (872)
Q Consensus 224 nATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~ 303 (872)
|+|+|+.+++.++ .++|++|++..- .|. .+...++..|+++..+|+ ..+..++.++|+++|.. +++
T Consensus 95 g~~~a~~~~~~~l-~~~gd~vl~~~p-~y~---~~~~~~~~~g~~~~~~~~-~~~~~~d~~~l~~~l~~--------~~~ 160 (376)
T 2dou_A 95 GSQEGLAHLLLAL-TEPEDLLLLPEV-AYP---SYFGAARVASLRTFLIPL-REDGLADLKAVPEGVWR--------EAK 160 (376)
T ss_dssp SHHHHHHHHHHHH-CCTTCEEEEESS-CCH---HHHHHHHHTTCEEEEECB-CTTSSBCGGGSCHHHHH--------HEE
T ss_pred CcHHHHHHHHHHh-cCCCCEEEECCC-CcH---hHHHHHHHcCCEEEEeeC-CCCCCCCHHHHHHhhcc--------Cce
Confidence 9999999999987 468899887632 233 334456678999999998 33345788899888853 378
Q ss_pred EEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCC---CCc-cCCC-CCCCCcEEEEcccccCCCCCCc--
Q 002866 304 LFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPK---DMD-SLGL-SLFRPDFIITSFYRVFGFDPTG-- 372 (872)
Q Consensus 304 LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~---~mi-pLDL-s~l~~DFlv~S~HK~fG~~PtG-- 372 (872)
+|.+++.+|.||.++|.+ +++.|+++|+++++|.++.... ... .+++ ...+.++++.|++|+||. .|
T Consensus 161 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~--~G~r 238 (376)
T 2dou_A 161 VLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNL--AGFR 238 (376)
T ss_dssp EEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTC--GGGC
T ss_pred EEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCC--hhhe
Confidence 999998999999999964 3456799999999999986531 001 1222 123568999999999983 46
Q ss_pred eEEEEEeCCCccccc
Q 002866 373 FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 vG~LyVRk~~i~~L~ 387 (872)
+|+++.++++++.+.
T Consensus 239 ~G~~~~~~~~~~~l~ 253 (376)
T 2dou_A 239 LGFALGSEEALARLE 253 (376)
T ss_dssp CEEEEECHHHHHHHH
T ss_pred eEEEecCHHHHHHHH
Confidence 799998877665553
No 113
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.53 E-value=8e-14 Score=150.77 Aligned_cols=170 Identities=11% Similarity=0.001 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....++|++||+++|+ + .|+||+|+|+|+++++.++.+++|++|++.. ..|.++... ++..|++++.++++
T Consensus 32 ~~~~~l~~~la~~~~~--~--~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~-~~~~~~~~~---~~~~g~~~~~v~~~- 102 (394)
T 1o69_A 32 EFVNRFEQSVKDYSKS--E--NALALNSATAALHLALRVAGVKQDDIVLASS-FTFIASVAP---ICYLKAKPVFIDCD- 102 (394)
T ss_dssp HHHHHHHHHHHHHHCC--S--EEEEESCHHHHHHHHHHHTTCCTTCEEEEES-SSCGGGTHH---HHHTTCEEEEECBC-
T ss_pred hHHHHHHHHHHHHhCC--C--cEEEeCCHHHHHHHHHHHcCCCCCCEEEECC-CccHHHHHH---HHHcCCEEEEEEeC-
Confidence 4678999999999998 2 4999999999999999998678899987763 345555332 34479999999998
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCC--C-
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLS--L- 352 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs--~- 352 (872)
.++.++.++|+++|... ..++++|.+++ +||...|++ +.+.|+++|+++++|++|+.|. ...+.. .
T Consensus 103 ~~~~~d~~~l~~~i~~~-----~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~--~~~~~~~~~~ 172 (394)
T 1o69_A 103 ETYNIDVDLLKLAIKEC-----EKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGS--FYKNKALGTF 172 (394)
T ss_dssp TTSSBCHHHHHHHHHHC-----SSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTC--EETTEETTSS
T ss_pred CCCCcCHHHHHHHHhcc-----cCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccc--eeCCcccccc
Confidence 46789999999988642 11478888875 899999997 4567899999999999998764 222221 1
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEEe-CCCccccc
Q 002866 353 FRPDFIITSFYRVFGFDPTGFGCLLIK-KSVMGSLQ 387 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtGvG~LyVR-k~~i~~L~ 387 (872)
..+|++++|.||.++ |.++|+++++ +++++.+.
T Consensus 173 ~~~~~~s~s~~K~l~--~~~~G~~~~~~~~l~~~l~ 206 (394)
T 1o69_A 173 GEFGVYSYNGNKIIT--TSGGGMLIGKNKEKIEKAR 206 (394)
T ss_dssp SSEEEEECCTTSSSC--CSSCEEEEESCHHHHHHHH
T ss_pred cCcEEEEEeCCccCC--CCCceEEEECCHHHHHHHH
Confidence 358999999999988 5689999996 56665554
No 114
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.53 E-value=2.2e-14 Score=153.93 Aligned_cols=172 Identities=10% Similarity=0.031 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-HHH-HHHHcCcEEEEEec
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-MAQ-SAKEKGAKVYSAWF 274 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~~~-~AkrkGaeV~~Vpv 274 (872)
...+.+|+.+++++|++++ .|+||+| |+|+.+++.++ +++||+|++..- .|.++.. +.. .....++.+..+++
T Consensus 71 ~~~~~~~~~la~~~g~~~~--~i~~~sG-t~a~~~~~~~~-~~~gd~vl~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~ 145 (417)
T 3n0l_A 71 EIETLAIERCKKLFNCKFA--NVQPNSG-SQANQGVYAAL-INPGDKILGMDL-SHGGHLTHGAKVSSSGKMYESCFYGV 145 (417)
T ss_dssp HHHHHHHHHHHHHHTCSEE--ECCCSSH-HHHHHHHHHHH-SCTTCEEEEECC-----------------CCSEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCc--ceEeccH-HHHHHHHHHHh-cCCCCEEEeccc-ccccccchhhhhhhhcceeeeEeccC
Confidence 4555789999999999764 3777766 89999999888 688999886632 3333322 111 12224566777777
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCC---CccCCC
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKD---MDSLGL 350 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~---mipLDL 350 (872)
+ .++.++.++|+++|... ++++|.+.+.+| |++.|++. .+.|+++|+++++|.+|+.|.. ..+..+
T Consensus 146 ~-~~~~~d~~~l~~~i~~~-------~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~ 215 (417)
T 3n0l_A 146 E-LDGRIDYEKVREIAKKE-------KPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPF 215 (417)
T ss_dssp C-TTSSCCHHHHHHHHHHH-------CCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCT
T ss_pred C-CCCCcCHHHHHHHHHhc-------CCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCcc
Confidence 7 46779999999999732 477888776554 99999974 5678999999999999865420 012233
Q ss_pred CCCCCcEEEEcccccCCCCCCceEEEEEe-CCCccccc
Q 002866 351 SLFRPDFIITSFYRVFGFDPTGFGCLLIK-KSVMGSLQ 387 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~~PtGvG~LyVR-k~~i~~L~ 387 (872)
. .+|++++|+||+|++ |.| |+++.+ +++.+.+.
T Consensus 216 ~--~~di~~~s~sK~l~g-~~~-G~~~~~~~~~~~~~~ 249 (417)
T 3n0l_A 216 P--YAHVVSSTTHKTLRG-PRG-GIIMTNDEELAKKIN 249 (417)
T ss_dssp T--TCSEEEEESSTTTCS-CSC-EEEEESCHHHHHHHH
T ss_pred c--cceEEEeeCccccCC-CCe-eEEEECCHHHHHHHh
Confidence 2 579999999999877 775 999888 46655554
No 115
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.53 E-value=2.6e-14 Score=151.66 Aligned_cols=206 Identities=11% Similarity=0.153 Sum_probs=140.7
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
.+++|+.+.... .|+.+++++.+ .+...-.....|.++. ..+.|++||+++|++++ .|+||+|+|+
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~~~~~~~~~~y~~~~----~~~lr~~la~~~g~~~~--~i~~t~g~~~ 93 (360)
T 3hdo_A 27 SWIKLNTNENPYPPSPEVVKAILE-------ELGPDGAALRIYPSAS----SQKLREVAGELYGFDPS--WIIMANGSDE 93 (360)
T ss_dssp TSEECSSCCCSSCCCHHHHHHHHH-------HHTTTCGGGGSCCCSS----CHHHHHHHHHHHTCCGG--GEEEESSHHH
T ss_pred ceeeccCCCCCCCCCHHHHHHHHH-------HHhcccchhhcCCCCc----hHHHHHHHHHHhCcCcc--eEEEcCCHHH
Confidence 478999877653 46777776432 1111000011233332 35899999999998776 5999999999
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVF 307 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~ 307 (872)
|+++++.++ +++||+|++..- .|.. +...++..|+++..+|++. ...+ +++ .+ . .+++++++
T Consensus 94 al~~~~~~l-~~~gd~Vl~~~p-~~~~---~~~~~~~~g~~~~~v~~~~-~~~~--~~l----~~----~--~~~~~v~i 155 (360)
T 3hdo_A 94 VLNNLIRAF-AAEGEEIGYVHP-SYSY---YGTLAEVQGARVRTFGLTG-DFRI--AGF----PE----R--YEGKVFFL 155 (360)
T ss_dssp HHHHHHHHH-CCTTCEEEEESS-SCTH---HHHHHHHHTCEEEEECBCT-TSSB--TTC----CS----S--BCSSEEEE
T ss_pred HHHHHHHHH-hCCCCEEEEcCC-ChHH---HHHHHHHCCCEEEEeeCCC-CCCH--HHH----Hh----h--cCCCEEEE
Confidence 999999988 578999887632 2333 3445667899999999865 2333 222 11 1 13569999
Q ss_pred eCccCcccchhcHHH-HHHHHHCCcEEEeeccccC--CCCCccCCC-CCCCCcEEEEcccccCCCCCCceEEEEEeCCCc
Q 002866 308 PVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLG--PKDMDSLGL-SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVM 383 (872)
Q Consensus 308 p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~a--G~~mipLDL-s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i 383 (872)
++.+|.||.++|++. .+.|+++|+++++|.++.. +.. .+.+ ...+.++++.|++|+||.+..++|+++++++++
T Consensus 156 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~ 233 (360)
T 3hdo_A 156 TTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESN--ALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVI 233 (360)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCC--CTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHH
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcc--hhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHH
Confidence 999999999999985 5677999999999999763 321 2222 234567899999999983123478888876666
Q ss_pred cccc
Q 002866 384 GSLQ 387 (872)
Q Consensus 384 ~~L~ 387 (872)
+.+.
T Consensus 234 ~~~~ 237 (360)
T 3hdo_A 234 AALD 237 (360)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5553
No 116
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.53 E-value=5.3e-14 Score=151.17 Aligned_cols=209 Identities=12% Similarity=0.097 Sum_probs=143.0
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----CC--CCCCCcEEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----NI--PENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----gA--~~dEY~VVF 221 (872)
+.+.|+.+...+ .|+.+.+++.+ .+... ...|..+. ...+.|+.|++++ |+ +++ .|+|
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~~~~---~~~y~~~~---g~~~lr~~ia~~~~~~~g~~~~~~--~i~~ 96 (385)
T 1b5p_A 32 DLVALTAGEPDFDTPEHVKEAARR-------ALAQG---KTKYAPPA---GIPELREALAEKFRRENGLSVTPE--ETIV 96 (385)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHH-------HHHTT---CCSCCCTT---CCHHHHHHHHHHHHHTTCCCCCGG--GEEE
T ss_pred CEEEecCCCCCCCCCHHHHHHHHH-------HHhcC---CCCCCCCC---CCHHHHHHHHHHHHHHhCCCCChH--HEEE
Confidence 468887776543 45666665432 12111 11233221 1346788888877 43 444 6999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-CCCccCHHHHHHHHhhhhccCCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW-PTLKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~-p~g~Id~edLe~~I~~~~rr~~~~ 300 (872)
|+|+|+|+++++.++ +++||+|++..- .|.. +...++..|++++.+|++. .+..++.++|++++..
T Consensus 97 t~g~~~al~~~~~~l-~~~gd~Vlv~~p-~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------- 163 (385)
T 1b5p_A 97 TVGGSQALFNLFQAI-LDPGDEVIVLSP-YWVS---YPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP-------- 163 (385)
T ss_dssp ESHHHHHHHHHHHHH-CCTTCEEEEEES-CCTH---HHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT--------
T ss_pred cCChHHHHHHHHHHh-cCCCCEEEEcCC-Cchh---HHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC--------
Confidence 999999999999988 578999876532 2333 3445667899999999874 2346788888876642
Q ss_pred CceEEEEeCccCcccchhcH---H-HHHHHHHCCcEEEeeccccCCCCC-ccCCCCCC--CCcEEEEcccccCCCCCCc-
Q 002866 301 AAGLFVFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSLGPKDM-DSLGLSLF--RPDFIITSFYRVFGFDPTG- 372 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~aG~~m-ipLDLs~l--~~DFlv~S~HK~fG~~PtG- 372 (872)
++++|.+++.+|.||.++|. + +++.|+++|+++++|.++...... -...+..+ +.++++.|++|+|| +.|
T Consensus 164 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~--~~G~ 241 (385)
T 1b5p_A 164 RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFA--MTGW 241 (385)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTT--CGGG
T ss_pred CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcC--Cccc
Confidence 58899999999999999984 3 356779999999999997542100 01222223 66899999999998 458
Q ss_pred -eEEEEEeCCCccccc
Q 002866 373 -FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 -vG~LyVRk~~i~~L~ 387 (872)
+|++++++++++.+.
T Consensus 242 RiG~~~~~~~~~~~l~ 257 (385)
T 1b5p_A 242 RIGYACGPKEVIKAMA 257 (385)
T ss_dssp CCEEEECCHHHHHHHH
T ss_pred ceEEEEeCHHHHHHHH
Confidence 899998876655543
No 117
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.52 E-value=9.5e-14 Score=147.86 Aligned_cols=170 Identities=15% Similarity=0.106 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....++|+.+++++|++ + .+++.++|+|+.+++..+ +++|+.|++.. ..|.++. ..++..|+++..+|.
T Consensus 88 ~~~~~l~~~la~~~~~~-~---~i~~~sGt~a~~~~l~~~-~~~gd~v~~~~-~~~~~~~---~~~~~~g~~~~~~~~-- 156 (399)
T 3tqx_A 88 TIHKELEKDISEFLGTD-D---TILYSSCFDANGGLFETL-LGPEDAIISDE-LNHASII---DGIRLCKAQRYRYKN-- 156 (399)
T ss_dssp HHHHHHHHHHHHHHTCS-E---EEEESCHHHHHHTTHHHH-CCTTCEEEEET-TCCHHHH---HHHHSCCSEEEEECT--
T ss_pred hHHHHHHHHHHHHHCCC-c---EEEECchHHHHHHHHHHh-cCCCCEEEECC-cccHHHH---HHHHHcCCceeEeCC--
Confidence 56789999999999985 2 444455688998888776 57889888763 3456543 345667999988875
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc------CC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS------LG 349 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip------LD 349 (872)
++.++|+++|.... ....++++|.+++.+|.||.++|++ +++.|+++|+++++|.++..+. .. ++
T Consensus 157 ----~d~~~l~~~l~~~~--~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~--~~~~~~~~~~ 228 (399)
T 3tqx_A 157 ----NAMGDLEAKLKEAD--EKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGF--IGENGRGTPE 228 (399)
T ss_dssp ----TCTTHHHHHHHHHH--TTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTT--SSTTSCCHHH
T ss_pred ----CCHHHHHHHHHhhh--ccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccc--cCCCCCchHH
Confidence 35678888887532 1112689999999999999999997 5678899999999999986553 11 11
Q ss_pred CCC--CCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 350 LSL--FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 350 Ls~--l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
... .++|+++.|+||+||+ |.| |+++.+++.++.+.
T Consensus 229 ~~~~~~~~di~~~s~sK~~~g-~~g-G~~~~~~~~~~~~~ 266 (399)
T 3tqx_A 229 YCGVADRVDILTGTLGKALGG-ASG-GYTSGHKEIIEWLR 266 (399)
T ss_dssp HHTCTTCCSEEEEESSSSSCS-SCC-EEEEECHHHHHHHH
T ss_pred hhCCCCCCcEEEecchHhccc-Cce-EEEEcCHHHHHHHH
Confidence 111 2679999999999996 678 99998887766554
No 118
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.52 E-value=3.8e-13 Score=144.14 Aligned_cols=223 Identities=10% Similarity=0.058 Sum_probs=149.6
Q ss_pred CCchhHHHHHhhcccCC-CCceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHH
Q 002866 131 QSSDKIDQLRANEYLHL-SPKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMD 208 (872)
Q Consensus 131 ~~t~~ID~lR~~EFP~L-~~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~ 208 (872)
+.+..++..-.+.|... +.+++|+.+..+. .++.+.+++.+ .+... ...|+.+ ..+.|++||+
T Consensus 13 ~~g~~~~d~~g~~~g~~~~~~i~l~~~~~~~~~~~~v~~a~~~-------~~~~~---~~~y~~~-----~~~l~~~la~ 77 (399)
T 1c7n_A 13 NLGSLKWDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKK-------YLDET---VLGYTGP-----TEEYKKTVKK 77 (399)
T ss_dssp TTTBHHHHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHH-------HHHHC---CCSSBCC-----CHHHHHHHHH
T ss_pred CCCccccccchhhccccCCCceeeeecCCCCCCCHHHHHHHHH-------HHhcC---CCCCCCC-----cHHHHHHHHH
Confidence 33444454433335321 3477887776543 45677776432 12111 1234333 3567888887
Q ss_pred hc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCC--c
Q 002866 209 HL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTL--K 280 (872)
Q Consensus 209 lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g--~ 280 (872)
++ | ++++ .|+||+|+|+|+.+++.++ .++|++|++..- .|.. +...++..|+++..+|.+..++ .
T Consensus 78 ~l~~~~g~~~~~~--~v~~t~g~~~a~~~~~~~l-~~~gd~vl~~~p-~~~~---~~~~~~~~g~~~~~~~~~~~~g~~~ 150 (399)
T 1c7n_A 78 WMKDRHQWDIQTD--WIINTAGVVPAVFNAVREF-TKPGDGVIIITP-VYYP---FFMAIKNQERKIIECELLEKDGYYT 150 (399)
T ss_dssp HHHHHHCCCCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEECSS-CCTH---HHHHHHTTTCEEEECCCEEETTEEE
T ss_pred HHHHHhCCCCChh--hEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCC-CcHh---HHHHHHHcCCEEEecccccCCCCEE
Confidence 75 7 5444 5999999999999999987 467899887632 2333 3344566799999888753222 4
Q ss_pred cCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccC----CCCCccCCCCC
Q 002866 281 LCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLG----PKDMDSLGLSL 352 (872)
Q Consensus 281 Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~a----G~~mipLDLs~ 352 (872)
++.++|+++|.. +++++|.+++.+|.||.++| ++ +++.|+++|+++++|.++.. |. ...++..
T Consensus 151 ~d~~~l~~~l~~-------~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~ 221 (399)
T 1c7n_A 151 IDFQKLEKLSKD-------KNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGY--EHTVFQS 221 (399)
T ss_dssp CCHHHHHHHHTC-------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTC--CCCCGGG
T ss_pred EcHHHHHHHhcc-------CCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CcccHHH
Confidence 789999998852 25889999999999999999 65 45678999999999999875 32 1234433
Q ss_pred C-----CCcEEEEcccccCCCCCCc--eEEEEEeC-CCcccc
Q 002866 353 F-----RPDFIITSFYRVFGFDPTG--FGCLLIKK-SVMGSL 386 (872)
Q Consensus 353 l-----~~DFlv~S~HK~fG~~PtG--vG~LyVRk-~~i~~L 386 (872)
+ +.++++.|++|+||. .| +|++++++ ++++.+
T Consensus 222 ~~~~~~~~~i~~~s~sK~~~~--~G~r~G~~~~~~~~~~~~l 261 (399)
T 1c7n_A 222 IDEQLADKTITFTAPSKTFNI--AGMGMSNIIIKNPDIRERF 261 (399)
T ss_dssp SCHHHHTTEEEEECSHHHHTC--GGGCCEEEECCCHHHHHHH
T ss_pred cCccccCcEEEEEeChhhccc--cchheEEEEECCHHHHHHH
Confidence 3 457899999999983 46 79999864 344433
No 119
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.51 E-value=2.7e-14 Score=158.95 Aligned_cols=165 Identities=15% Similarity=0.067 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec--
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF-- 274 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv-- 274 (872)
..+.++|+.+|+ +|++ + .++||+|+|+|+.+++.++ +++|++|++... .|.++... +...|++++.++.
T Consensus 57 ~~~~~~~~~la~-~g~~-~--~v~~~~G~t~a~~~~~~a~-~~~gd~Vlv~~~-~h~s~~~~---~~~~G~~~~~v~~~~ 127 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDY-D--GYFLVNGTTSGILSVIQSF-SQKKGDILMARN-VHKSVLHA---LDISQQEGHFIETHQ 127 (446)
T ss_dssp SHHHHHHHHHCS-CTTE-E--EEEESSHHHHHHHHHHHTT-TTSSSCEEECTT-CCHHHHHH---HHHHTCCEEECEEEE
T ss_pred hHHHHHHHHHHh-cCCC-c--eEEEeCCHHHHHHHHHHHh-cCCCCEEEEecC-ccHHHHHH---HHHcCCeEEEEeCee
Confidence 456889999999 9986 2 6999999999999999987 578999887743 56666433 2336899998887
Q ss_pred cCCC---CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCC---CCcc
Q 002866 275 KWPT---LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPK---DMDS 347 (872)
Q Consensus 275 d~p~---g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~---~mip 347 (872)
+... +.++.++| +. +++++|.+++ .|.+|.++|++ +++.|+++|+++++|+++.... .. +
T Consensus 128 ~~~~~~~~~~d~~~l---~~--------~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~-~ 194 (446)
T 2x3l_A 128 SPLTNHYNKVNLSRL---NN--------DGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-P 194 (446)
T ss_dssp CTTTSSEEEEEC------------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTS-C
T ss_pred ccccCcCCCCCHHHH---cC--------CCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCC-C
Confidence 4211 34666666 22 2578999999 66699999998 4578899999999999987611 00 4
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcc
Q 002866 348 LGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 348 LDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~ 384 (872)
+++...++|++++|+||++++ |.|+|+|+++++.++
T Consensus 195 ~~~~~~g~Di~~~S~~K~l~~-~~g~g~l~~~~~~i~ 230 (446)
T 2x3l_A 195 DSTLNYQADYVVQSFHKTLPA-LTMGSVLYIHKNAPY 230 (446)
T ss_dssp CCGGGGTCSEEEECHHHHSSS-CTTCEEEEEETTCTT
T ss_pred CChHHcCCCEEEECCcccccc-ccccEEEEEcCCcCC
Confidence 555567899999999997666 889999999988654
No 120
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.51 E-value=4.3e-14 Score=149.91 Aligned_cols=210 Identities=14% Similarity=0.130 Sum_probs=138.2
Q ss_pred CCceecccCCCCC------CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGFGL------FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAtgp------~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++..|+|.++..+ .++.+++++.+ .+.........| +. ....+.|++|++++|+ ++ .|+|
T Consensus 26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~-------~~~~~~~~~~~y--~~--~~~~~l~~~la~~~g~-~~--~v~~ 91 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKE-------QVEKLLHVSNLY--EN--PWQEELAHKLVKHFWT-EG--KVFF 91 (375)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHH-------HHHHCSCCCTTB--CC--HHHHHHHHHHHHTSSS-CE--EEEE
T ss_pred CCCEEEEcCCcccccccCCCCHHHHHHHHH-------HHHhccccCccc--CC--HHHHHHHHHHHhhcCC-CC--eEEE
Confidence 3468999986643 56777776532 121110000123 22 3456889999999998 33 5999
Q ss_pred eCCHHHHHHHHHhhC-CC----CCC-CeEEEecccCchhHHHHHHHHHH----cCcE-----EEEEeccCCCCccCHHHH
Q 002866 222 TVSRGSAFKLLAESY-PF----HTN-KKLLTMFDYESQSVNWMAQSAKE----KGAK-----VYSAWFKWPTLKLCSTDL 286 (872)
Q Consensus 222 TsnATeALnLVaesl-pf----~~G-d~ILT~~DhEHnSVl~~~~~Akr----kGae-----V~~Vpvd~p~g~Id~edL 286 (872)
|+|+|+|+.+++... .+ ++| ++|++....-|.....+...... .|.. +..++. .+.++|
T Consensus 92 ~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l 165 (375)
T 2eh6_A 92 ANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL------NDIDSV 165 (375)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT------TCHHHH
T ss_pred eCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC------chHHHH
Confidence 999999999987642 11 467 88876543224444433221100 1222 444332 367777
Q ss_pred HHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeecccc-CCCCCccCCCCCCC--CcEE
Q 002866 287 RKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSL-GPKDMDSLGLSLFR--PDFI 358 (872)
Q Consensus 287 e~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~-aG~~mipLDLs~l~--~DFl 358 (872)
+++|. +++++|.+.+.+|.||.++| ++ +++.|+++|+++++|.++. .+.....+++..++ +|++
T Consensus 166 ~~~l~--------~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~ 237 (375)
T 2eh6_A 166 YKLLD--------EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI 237 (375)
T ss_dssp HTTCC--------TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE
T ss_pred HHHhc--------CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE
Confidence 76653 25899999999999999988 86 4567899999999999987 54310124455555 9999
Q ss_pred EEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 359 ITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 359 v~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
++| |+||+ +.++|+++++++.++.+.+
T Consensus 238 s~S--K~~~~-g~~~G~~~~~~~~~~~~~~ 264 (375)
T 2eh6_A 238 ALA--KGLGG-GVPIGAILAREEVAQSFTP 264 (375)
T ss_dssp EEC--GGGGT-TSCCEEEEEEHHHHTTCCT
T ss_pred EEc--ccccC-CCCeEEEEEcHHHHhhhcC
Confidence 888 88886 7889999999887776664
No 121
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.51 E-value=1.4e-12 Score=139.60 Aligned_cols=205 Identities=8% Similarity=0.041 Sum_probs=128.5
Q ss_pred CceecccCCCC------CCcHHHHHHhhhcccccHHHHHHhhccCcCcCC-CchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDYCGFG------LFSYIQTLHYWESSTFSLSEITANLSNHALYGG-AEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtg------p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygN-psS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+.-|||+++.. ..++.+++++.+ ..... .++. .......+++++++++++| ++ .|+|
T Consensus 35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~--------~~~~~----~~~~~~~~~~~~~~l~~~la~~~g--~~--~v~~ 98 (392)
T 3ruy_A 35 GNRYMDLLSAYSAVNQGHRHPKIINALID--------QANRV----TLTSRAFHSDQLGPWYEKVAKLTN--KE--MVLP 98 (392)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHH--------HHTTC----SCCCTTSEETTHHHHHHHHHHHHT--CS--EEEE
T ss_pred CCEEEEcCCChhhhccCCCCHHHHHHHHH--------HHHhc----cccccccCCHHHHHHHHHHHHhcC--CC--EEEE
Confidence 46799988643 246777776432 11111 1111 1112456789999999998 33 4999
Q ss_pred eCCHHHHHHHHHhhCC-C--------CCCCeEEEecccCchhHHHHHHHHHHcC---------cEEEEEeccCCCCccCH
Q 002866 222 TVSRGSAFKLLAESYP-F--------HTNKKLLTMFDYESQSVNWMAQSAKEKG---------AKVYSAWFKWPTLKLCS 283 (872)
Q Consensus 222 TsnATeALnLVaeslp-f--------~~Gd~ILT~~DhEHnSVl~~~~~AkrkG---------aeV~~Vpvd~p~g~Id~ 283 (872)
|+|+|+|+.+++..+. . ..+++|++.....|.............+ ..+..++.+ +.
T Consensus 99 ~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~ 172 (392)
T 3ruy_A 99 MNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG------DL 172 (392)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT------CH
T ss_pred eCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc------cH
Confidence 9999999998876532 1 1255777654323343333222111000 123433321 67
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRP 355 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~ 355 (872)
++|+++|. +++++|.+.+.+|.||.++| ++ +.+.|+++|+++++|.+|. .+.. ...++.....+
T Consensus 173 ~~l~~~l~--------~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~ 244 (392)
T 3ruy_A 173 EALKAAIT--------PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTP 244 (392)
T ss_dssp HHHHHHCC--------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCC
T ss_pred HHHHHHhc--------cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCC
Confidence 88888774 25899999999999999999 87 4567899999999999985 3210 12334444568
Q ss_pred cEEEEcccccCCCCC-CceEEEEEeCCCcccc
Q 002866 356 DFIITSFYRVFGFDP-TGFGCLLIKKSVMGSL 386 (872)
Q Consensus 356 DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L 386 (872)
|++++| |.+++ - ..+|+++++++.++.+
T Consensus 245 d~~~~S--K~l~g-G~~~~G~~~~~~~~~~~~ 273 (392)
T 3ruy_A 245 DMYILG--KALGG-GVFPISCAAANRDILGVF 273 (392)
T ss_dssp SEEEEC--GGGGT-TTSCCEEEEECHHHHTTC
T ss_pred CEEEEc--hhhhC-ChhhhEEEEECHHHHhhh
Confidence 999887 98763 1 2389998877655443
No 122
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.51 E-value=8.7e-14 Score=147.37 Aligned_cols=202 Identities=8% Similarity=-0.027 Sum_probs=139.8
Q ss_pred ceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC------CCCCCCcEEEe
Q 002866 150 KVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN------IPENEYGLVFT 222 (872)
Q Consensus 150 ~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg------A~~dEY~VVFT 222 (872)
++.|..+... +.++.+++++.+ .+.... ..|+. . . .+.|+.||++++ ++++ .|+||
T Consensus 25 ~idl~~~~~~~~~~~~v~~a~~~-------~~~~~~---~~y~~-~-~---~~lr~~la~~~~~~~~~~~~~~--~i~~t 87 (377)
T 3fdb_A 25 VLPLWVAESDFSTCPAVLQAITD-------AVQREA---FGYQP-D-G---SLLSQATAEFYADRYGYQARPE--WIFPI 87 (377)
T ss_dssp SEECCSSCCCSCCCHHHHHHHHH-------HHHTTC---CSSCC-S-S---CCHHHHHHHHHHHHHCCCCCGG--GEEEE
T ss_pred eeeecccCCCCCCCHHHHHHHHH-------HHHcCC---CCCCC-C-C---HHHHHHHHHHHHHHhCCCCCHH--HEEEe
Confidence 6777766543 356777776432 121111 12332 1 1 468888888888 7665 59999
Q ss_pred CCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCc
Q 002866 223 VSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 223 snATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
+|+|+|+++++.++ .++|++|++... .|... ...++..|+++..+|++.. ++.++|+++|.. ++
T Consensus 88 ~g~~~a~~~~~~~~-~~~gd~vl~~~~-~~~~~---~~~~~~~g~~~~~~~~~~~---~d~~~l~~~l~~--------~~ 151 (377)
T 3fdb_A 88 PDVVRGLYIAIDHF-TPAQSKVIVPTP-AYPPF---FHLLSATQREGIFIDATGG---INLHDVEKGFQA--------GA 151 (377)
T ss_dssp SCHHHHHHHHHHHH-SCTTCCEEEEES-CCTHH---HHHHHHHTCCEEEEECTTS---CCHHHHHHHHHT--------TC
T ss_pred CChHHHHHHHHHHh-cCCCCEEEEcCC-CcHhH---HHHHHHcCCEEEEccCCCC---CCHHHHHHHhcc--------CC
Confidence 99999999999987 478899876532 23333 3445667999999999863 899999999864 37
Q ss_pred eEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccccC----C-CCCccCCCCC---CCCcEEEEcccccCCCCC
Q 002866 303 GLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSLG----P-KDMDSLGLSL---FRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~a----G-~~mipLDLs~---l~~DFlv~S~HK~fG~~P 370 (872)
+++++++.+|.||.++|.+. ++.|+++|+++++|.++.. | + ...++.. .+.++++.|++|+||.+.
T Consensus 152 ~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~G 229 (377)
T 3fdb_A 152 RSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQH--TVAAGVSDTAASVCITITAPSKAWNIAG 229 (377)
T ss_dssp CEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCC--CCGGGSCHHHHHHEEEEECSTTTTTCGG
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCC--CcccHHHccCCCcEEEEEeChHhccCcc
Confidence 89999999999999998753 3457899999999999865 2 2 1223322 344599999999997311
Q ss_pred CceEEEEE-eCCCcccc
Q 002866 371 TGFGCLLI-KKSVMGSL 386 (872)
Q Consensus 371 tGvG~LyV-Rk~~i~~L 386 (872)
..+|++++ ++.+++.+
T Consensus 230 ~r~G~~~~~~~~~~~~~ 246 (377)
T 3fdb_A 230 LKCAQIIFSNPSDAEHW 246 (377)
T ss_dssp GCCEEEECCSHHHHHHH
T ss_pred hhheEEEeCCHHHHHHH
Confidence 23787776 44444444
No 123
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.51 E-value=4.7e-14 Score=152.75 Aligned_cols=192 Identities=16% Similarity=0.100 Sum_probs=135.6
Q ss_pred ceecccCCC---CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHH
Q 002866 150 KVCLDYCGF---GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRG 226 (872)
Q Consensus 150 ~IYLDyAAt---gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnAT 226 (872)
.|| |+++. +++|+.+++++. .|++|+ ...+.+++.+++++|+++.+ .++||+|+|
T Consensus 29 ~v~-~~~~~~~~~~~~~~v~~a~~------------------~~~~~~--~~~~~~~~~~a~~~g~~~~~-~~~~~~ggt 86 (374)
T 2aeu_A 29 ALY-DLSGLSGGFLIDEKDKALLN------------------TYIGSS--YFAEKVNEYGLKHLGGDEND-KCVGFNRTS 86 (374)
T ss_dssp GCE-ECSSCCCCCCCCHHHHHHHT------------------STTHHH--HHHHHHHHHHHHHHTCCTTE-EEEEESSHH
T ss_pred cee-eecccCCCCCCCHHHHHHHH------------------HhcCch--HHHHHHHHHHHHHhCCCCcc-eEEEEcChH
Confidence 477 87764 578888887631 234443 23356777778899995322 599999999
Q ss_pred HHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceE-E
Q 002866 227 SAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGL-F 305 (872)
Q Consensus 227 eALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~L-V 305 (872)
+|+.+++.++ +||+|++..-..|. ...+...++..|++++.+ .+.++|+++ . +++++ |
T Consensus 87 ~a~~~~~~~~---~gd~Vl~~~~~y~~-~~~~~~~~~~~g~~~~~v--------~d~~~l~~~-~--------~~~~~~v 145 (374)
T 2aeu_A 87 SAILATILAL---KPKKVIHYLPELPG-HPSIERSCKIVNAKYFES--------DKVGEILNK-I--------DKDTLVI 145 (374)
T ss_dssp HHHHHHHHHH---CCSEEEEECSSSSC-CTHHHHHHHHTTCEEEEE--------SCHHHHHTT-C--------CTTEEEE
T ss_pred HHHHHHHHhC---CCCEEEEecCCCCc-cHHHHHHHHHcCcEEEEe--------CCHHHHHhc-C--------CCccEEE
Confidence 9999999887 79998765431112 112223566789998876 256666554 2 35899 9
Q ss_pred EEeCccCccc-chhcHH-HHHHHHHCCcEEEeeccccCCCCCccC-C--CCCCCCcEEEEcccccCCCCCCceEEEEEeC
Q 002866 306 VFPVQSRVTG-AKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSL-G--LSLFRPDFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 306 a~p~vSNvTG-~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipL-D--Ls~l~~DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
.+++.+|.|| .+.|++ +++.|+++|+++++|.++..+.. .+. . .-.+++|++++|+||++++ | ++|+++.++
T Consensus 146 ~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~di~~~S~sK~l~g-~-~~G~~~~~~ 222 (374)
T 2aeu_A 146 ITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVR-LLFNQPPALKLGADLVVTSTDKLMEG-P-RGGLLAGKK 222 (374)
T ss_dssp EECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHH-HHTTCCCHHHHTCSEEEEETTSSSSS-C-SCEEEEEEH
T ss_pred EEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccc-cccccCCccccCCcEEEecCcccccC-c-ceEEEEECH
Confidence 9999999999 899997 45678999999999998754320 011 1 1124789999999999886 5 899999998
Q ss_pred CCccccc
Q 002866 381 SVMGSLQ 387 (872)
Q Consensus 381 ~~i~~L~ 387 (872)
+.++.+.
T Consensus 223 ~~~~~l~ 229 (374)
T 2aeu_A 223 ELVDKIY 229 (374)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8776654
No 124
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.51 E-value=1.2e-13 Score=149.28 Aligned_cols=200 Identities=13% Similarity=0.025 Sum_probs=141.6
Q ss_pred ceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 150 KVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 150 ~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
.-|+|.+...+ +++.+++++.+ .+ .. ..|+. .....++|++||+++|++ .++||+|+|+|
T Consensus 30 ~~~id~~~~~~~~~~~v~~a~~~-------~~-~~----~~y~~---~~~~~~l~~~la~~~~~~----~~v~~~~Gt~a 90 (399)
T 2oga_A 30 VPFLDLKAAYEELRAETDAAIAR-------VL-DS----GRYLL---GPELEGFEAEFAAYCETD----HAVGVNSGMDA 90 (399)
T ss_dssp BCSCCHHHHHHHTHHHHHHHHHH-------HH-HH----TCCSS---SHHHHHHHHHHHHHTTSS----EEEEESCHHHH
T ss_pred CcccccCcCCCCCCHHHHHHHHH-------HH-hc----CCCCC---chhHHHHHHHHHHHHCCC----eEEEecCHHHH
Confidence 35777765544 45667666432 11 11 12332 145678999999999985 38899999999
Q ss_pred HHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEe
Q 002866 229 FKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFP 308 (872)
Q Consensus 229 LnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p 308 (872)
+.+++.++.+++|++|++.. ..|.++. ..++..|++++.++++..++.++.++|+++|.. ++++|.
T Consensus 91 ~~~~l~~~~~~~gd~vl~~~-~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~--------~~~~v~-- 156 (399)
T 2oga_A 91 LQLALRGLGIGPGDEVIVPS-HTYIASW---LAVSATGATPVPVEPHEDHPTLDPLLVEKAITP--------RTRALL-- 156 (399)
T ss_dssp HHHHHHHTTCCTTCEEEEES-SSCTHHH---HHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCT--------TEEEEC--
T ss_pred HHHHHHHhCCCCcCEEEECC-CccHHHH---HHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCC--------CCeEEE--
Confidence 99999998678899987763 2344433 345668999999998754567899999888752 477776
Q ss_pred CccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCC--CcEEEEccc--ccCCCCCCceEEEEEe-CCC
Q 002866 309 VQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR--PDFIITSFY--RVFGFDPTGFGCLLIK-KSV 382 (872)
Q Consensus 309 ~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~--~DFlv~S~H--K~fG~~PtGvG~LyVR-k~~ 382 (872)
.+|.||.+.|++ +.+.|+++|+++++|+++..+. ..+...++ +|++++|+| |+||. |-..|+++.+ +++
T Consensus 157 -~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~---~~~~~~~~~~~di~~~S~~~sK~~~~-~G~~g~~~~~~~~~ 231 (399)
T 2oga_A 157 -PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGA---RYRGRRIGAGSSVAAFSFYPGKNLGC-FGDGGAVVTGDPEL 231 (399)
T ss_dssp -CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTC---EETTEETTCTTCEEEEECCTTSSSCC-SSCCEEEEESCHHH
T ss_pred -EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccC---ccCCeecccccCEEEEeCCCCccCCc-CCceEEEEeCCHHH
Confidence 368999999997 4567899999999999998774 12333344 799999996 99984 2225556555 455
Q ss_pred ccccc
Q 002866 383 MGSLQ 387 (872)
Q Consensus 383 i~~L~ 387 (872)
++.++
T Consensus 232 ~~~l~ 236 (399)
T 2oga_A 232 AERLR 236 (399)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55454
No 125
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.50 E-value=6.2e-14 Score=147.62 Aligned_cols=198 Identities=12% Similarity=0.198 Sum_probs=140.2
Q ss_pred CCceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC---CCCCCCcEEEeC
Q 002866 148 SPKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN---IPENEYGLVFTV 223 (872)
Q Consensus 148 ~~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg---A~~dEY~VVFTs 223 (872)
..++|||++... +.|+.+++++.+. +... ....|+.+ ...+.|++||++++ ++++ .|+||+
T Consensus 19 ~~~i~l~~~~~~~~~~~~v~~a~~~~-------~~~~--~~~~y~~~----~~~~lr~~la~~~~~~~~~~~--~v~~~~ 83 (335)
T 1uu1_A 19 RDKTYLALNENPFPFPEDLVDEVFRR-------LNSD--ALRIYYDS----PDEELIEKILSYLDTDFLSKN--NVSVGN 83 (335)
T ss_dssp CCSEEESSCCCSSCCCHHHHHHHHHT-------CCGG--GGGSCCCS----SCHHHHHHHHHHHTCSSCCGG--GEEEES
T ss_pred CcceECCCCCCCCCCCHHHHHHHHHH-------hhhh--hhhcCCCC----chHHHHHHHHHHcCCCCCCHH--HEEEcC
Confidence 358999999885 4678888775431 1000 01123322 25689999999999 8765 599999
Q ss_pred CHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCce
Q 002866 224 SRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAG 303 (872)
Q Consensus 224 nATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~ 303 (872)
|+|+|+++++.++ |++|++. - .+.. +...++..|+++..+|.+. ++.++.++| ++++
T Consensus 84 G~~~al~~~~~~~----gd~Vl~~-p-~y~~---~~~~~~~~g~~~~~v~~~~-~~~~d~~~l-------------~~~~ 140 (335)
T 1uu1_A 84 GADEIIYVMMLMF----DRSVFFP-P-TYSC---YRIFAKAVGAKFLEVPLTK-DLRIPEVNV-------------GEGD 140 (335)
T ss_dssp SHHHHHHHHHHHS----SEEEECS-S-SCHH---HHHHHHHHTCEEEECCCCT-TSCCCCCCC-------------CTTE
T ss_pred ChHHHHHHHHHHh----CCcEEEC-C-CcHH---HHHHHHHcCCeEEEeccCC-CCCCCHHHc-------------CCCC
Confidence 9999999999998 7888765 3 2332 3345566799999988864 345565544 1478
Q ss_pred EEEEeCccCcccchhcHHHHH-HHHHCCcEEEeeccccCC-CCCccCC-CCCCCCcEEEEcccccCCCCCCc--eEEEEE
Q 002866 304 LFVFPVQSRVTGAKYSYQWMA-LAQQNHWHVLLDAGSLGP-KDMDSLG-LSLFRPDFIITSFYRVFGFDPTG--FGCLLI 378 (872)
Q Consensus 304 LVa~p~vSNvTG~i~PLe~I~-~Are~G~~VLVDAAQ~aG-~~mipLD-Ls~l~~DFlv~S~HK~fG~~PtG--vG~LyV 378 (872)
+|.+++.+|.||.++|.+.+. .++..| ++++|.++... .. -.++ +...+.++++.|++|+|| +.| +|++++
T Consensus 141 ~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g--~~G~r~G~~~~ 216 (335)
T 1uu1_A 141 VVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFS--LAAQRVGYVVA 216 (335)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTT--CGGGCCEEEEE
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcC--CcccCeEEEEe
Confidence 999899999999999998654 456568 89999998621 10 0133 234567899999999998 447 799999
Q ss_pred eCCCccccc
Q 002866 379 KKSVMGSLQ 387 (872)
Q Consensus 379 Rk~~i~~L~ 387 (872)
+++.++.+.
T Consensus 217 ~~~~~~~l~ 225 (335)
T 1uu1_A 217 SEKFIDAYN 225 (335)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 887766554
No 126
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.50 E-value=2e-13 Score=146.60 Aligned_cols=179 Identities=14% Similarity=0.163 Sum_probs=127.7
Q ss_pred HHHHHHHHHHhc----CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec
Q 002866 199 EHDIKTRIMDHL----NIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 199 ieeARerIA~lL----gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv 274 (872)
..+.|++||+++ |++.+...|+||+|+|+|+.+++.++ .++|++|++... .|. .+...++..|+++..+|.
T Consensus 77 ~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~-~~~gd~vl~~~p-~~~---~~~~~~~~~g~~~~~v~~ 151 (407)
T 2zc0_A 77 IPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVL-IDPGDVVITENP-SYI---NTLLAFEQLGAKIEGVPV 151 (407)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEES-CCH---HHHHHHHTTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHh-cCCCCEEEEeCC-ChH---HHHHHHHHcCCEEEEccc
Confidence 357888999888 84322236999999999999999988 578999876532 222 334456678999999998
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEE-EEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCCC--Ccc
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLF-VFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPKD--MDS 347 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LV-a~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~~--mip 347 (872)
+. ++ ++.++|+++|..... ...++++| +++..+|.||.++|++ +++.|+++|+++++|.++....- ...
T Consensus 152 ~~-~~-~d~~~l~~~l~~~~~--~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 227 (407)
T 2zc0_A 152 DN-DG-MRVDLLEEKIKELKA--KGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDI 227 (407)
T ss_dssp ET-TE-ECHHHHHHHHHHHHH--TTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSC
T ss_pred CC-CC-CCHHHHHHHHHhhhc--ccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCC
Confidence 75 34 899999998862100 01257776 6889999999999995 34567899999999999875320 011
Q ss_pred CCCCCC---CCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 348 LGLSLF---RPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 348 LDLs~l---~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
..+..+ +.++++.|++|+||+ -..+|++++++++++.+.
T Consensus 228 ~~~~~~~~~~~~i~~~s~sK~~~~-G~r~G~~~~~~~~~~~~~ 269 (407)
T 2zc0_A 228 VPLKALDNEGRVIVAGTLSKVLGT-GFRIGWIIAEGEILKKVL 269 (407)
T ss_dssp CCGGGGCSSCCEEEEEESTTTTCT-TSCCEEEECCHHHHHHHH
T ss_pred CChhhcCCCCCEEEEcccccccCC-CcceEEEecCHHHHHHHH
Confidence 223322 456899999999983 223899998877665554
No 127
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.50 E-value=4.8e-14 Score=156.67 Aligned_cols=175 Identities=11% Similarity=0.003 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEE--eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHH-------HHHHHcCcE
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVF--TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMA-------QSAKEKGAK 268 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVF--TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~-------~~AkrkGae 268 (872)
..+..++++|+++|++. .++| |+|+|+|+.+++.++ +++||+|++.....|.....+. ..+++.|++
T Consensus 60 ~~~~Le~~lA~l~g~e~---alv~p~~~sGt~Ai~~al~al-l~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~ 135 (409)
T 3jzl_A 60 GRDTLERVYATVFKTEA---ALVRPQIISGTHAISTVLFGI-LRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIG 135 (409)
T ss_dssp HHHHHHHHHHHHHTCSE---EEEETTSCSHHHHHHHHHHHH-CCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCE
T ss_pred HHHHHHHHHHHHhCCCc---EEEECCCccHHHHHHHHHHHh-cCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCE
Confidence 36678889999999853 4776 899999999998887 5889999876412344444333 345667999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeC----ccCcccchhcHH-HHHHHHH--CCcEEEeeccccC
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPV----QSRVTGAKYSYQ-WMALAQQ--NHWHVLLDAGSLG 341 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~----vSNvTG~i~PLe-~I~~Are--~G~~VLVDAAQ~a 341 (872)
++.++.++ ++.++.++|+++|.. +|++|.+.. .+|.||.+.|++ +++.|++ +|+++++|.++..
T Consensus 136 ~~~v~~~~-~g~~d~e~l~~ai~~--------~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~ 206 (409)
T 3jzl_A 136 YSSVPLLE-NGDVDFPRIAKKMTP--------KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGE 206 (409)
T ss_dssp EEECCCCT-TSCCCHHHHHHHCCT--------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred EEEeCCCC-CCCcCHHHHHHhccC--------CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccc
Confidence 99999875 578999999988752 589999999 999999999997 4567899 9999999999876
Q ss_pred CCCCccCCCCCCCCcEEEEcccccCCCCCC--ceEEEEEeCCCcccccC
Q 002866 342 PKDMDSLGLSLFRPDFIITSFYRVFGFDPT--GFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 342 G~~mipLDLs~l~~DFlv~S~HK~fG~~Pt--GvG~LyVRk~~i~~L~P 388 (872)
+. ...+....++|+++.|+||++|+ +. ..|+++.++++++.+..
T Consensus 207 ~~--~~~~p~~~g~Div~~S~sK~lgg-~~~~~GG~v~~~~~li~~l~~ 252 (409)
T 3jzl_A 207 FV--EYQEPPEVGADIIAGSLIKNPGG-GLAKTGGYIAGKEALVDLCGY 252 (409)
T ss_dssp TT--SSCCSGGGTCSEEEEETTSGGGT-TTCSSCEEEEECHHHHHHHHH
T ss_pred cc--ccCCccccCCeEEEECccccCCc-cCCceEEEEEeCHHHHHHHHH
Confidence 64 12233456899999999999885 21 13888888887776654
No 128
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.50 E-value=8e-14 Score=150.84 Aligned_cols=211 Identities=10% Similarity=0.007 Sum_probs=139.5
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----CC--CCCCCcEEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----NI--PENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----gA--~~dEY~VVF 221 (872)
.+++|..+...+ .++.+++++.+. +.. .. ...|+.+ ....+.|+.||+++ |+ +++ ..|+|
T Consensus 38 ~~idl~~g~~~~~~~~~v~~a~~~~-------~~~-~~-~~~y~~~---~g~~~l~~~ia~~~~~~~g~~~~~~-~~v~~ 104 (412)
T 2x5d_A 38 DIIDLSMGNPDGPTPPHIVEKLCTV-------AQR-ED-THGYSTS---RGIPRLRRAISHWYRDRYDVQIDPE-SEAIV 104 (412)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHT-------C-----------CT---TCCHHHHHHHHHHHHHHHCCCCCTT-TSEEE
T ss_pred CEEecCCCCCCCCCCHHHHHHHHHH-------HhC-CC-CCCCCCC---CCcHHHHHHHHHHHHHHhCCCCCCC-cCEEE
Confidence 367777765543 456676664331 100 00 0123321 12357888999988 85 441 25999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-CCccCHHHHHHHHhhhhccCCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP-TLKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p-~g~Id~edLe~~I~~~~rr~~~~ 300 (872)
|+|+|+|+.+++.++ .++|++|++..- .|... ...++..|+++..+|++.. +..++.++|++++. +
T Consensus 105 t~g~~~a~~~~~~~~-~~~gd~Vl~~~p-~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~--------~ 171 (412)
T 2x5d_A 105 TIGSKEGLAHLMLAT-LDHGDTILVPNP-SYPIH---IYGAVIAGAQVRSVPLVPGIDFFNELERAIRESI--------P 171 (412)
T ss_dssp ESCHHHHHHHHHHHH-CCTTCEEEEEES-CCHHH---HHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEE--------S
T ss_pred cCChHHHHHHHHHHh-CCCCCEEEEcCC-CchhH---HHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcc--------c
Confidence 999999999999987 578999876632 33433 3345567999999998753 22256677766653 2
Q ss_pred CceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCC--CCccCCCCC----CCCcEEEEcccccCCCCC
Q 002866 301 AAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPK--DMDSLGLSL----FRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~--~mipLDLs~----l~~DFlv~S~HK~fG~~P 370 (872)
++++|.+++.+|.||.++|.+ +++.|+++|+++++|.++.... .....++.. .+.|+++.|++|+|| +
T Consensus 172 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~--~ 249 (412)
T 2x5d_A 172 KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYN--M 249 (412)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCS--C
T ss_pred CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccC--C
Confidence 578899999999999999964 3456789999999999987632 001223333 367899999999998 3
Q ss_pred Cc--eEEEEEeCCCccccc
Q 002866 371 TG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 371 tG--vG~LyVRk~~i~~L~ 387 (872)
.| +|++++++++++.+.
T Consensus 250 ~G~r~G~~~~~~~~~~~l~ 268 (412)
T 2x5d_A 250 AGWRIGFMVGNPELVSALA 268 (412)
T ss_dssp TTSCCEEEEECHHHHHHHH
T ss_pred cccceEEEEcCHHHHHHHH
Confidence 46 799999877766554
No 129
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.50 E-value=3.6e-14 Score=152.19 Aligned_cols=206 Identities=11% Similarity=0.014 Sum_probs=138.0
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+..|+|.++. ++.|+.+++++.+ .+. .. ..+.+.......+++|+++++++|++++ .|+||
T Consensus 44 g~~~ld~~~~~~~~~~g~~~~~v~~a~~~-------~~~-~~---~~~~~~~~~~~~~~l~~~la~~~~~~~~--~v~~~ 110 (395)
T 1vef_A 44 GNEYIDCVGGYGVANLGHGNPEVVEAVKR-------QAE-TL---MAMPQTLPTPMRGEFYRTLTAILPPELN--RVFPV 110 (395)
T ss_dssp SCEEEESSHHHHTCTTCBTCHHHHHHHHH-------HHH-HC---CCCCTTSCCHHHHHHHHHHHHTSCTTEE--EEEEE
T ss_pred CCEEEEccCccccccCCCCCHHHHHHHHH-------HHH-hC---CCCccccCCHHHHHHHHHHHHhcCCCcC--EEEEc
Confidence 4678998654 5567778877533 121 11 1111101135678999999999998665 59999
Q ss_pred CCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHHHHcCcE------------EEEEeccCCCCccCHHHHHHH
Q 002866 223 VSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK------------VYSAWFKWPTLKLCSTDLRKQ 289 (872)
Q Consensus 223 snATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae------------V~~Vpvd~p~g~Id~edLe~~ 289 (872)
+|+|+|+.+++..+ .+.+|++||+.....|..+..+... .|.+ +..++. .+.++|+++
T Consensus 111 ~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~---~g~~~~~~~~~p~~~~~~~~~~------~d~~~l~~~ 181 (395)
T 1vef_A 111 NSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSV---TWEPKYREPFLPLVEPVEFIPY------NDVEALKRA 181 (395)
T ss_dssp SSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHT---CCCHHHHGGGCSCSSCEEEECT------TCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhh---cCCcccccccCCCCCCeeEeCC------CcHHHHHHH
Confidence 99999999988764 2346788776543234444433221 2332 333332 367888877
Q ss_pred HhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEEEEc
Q 002866 290 ISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITS 361 (872)
Q Consensus 290 I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S 361 (872)
|.. ++++|.+.+.+|.||.++| ++ +++.|+++|+++++|.++. .+.. ..++++....+|++ |
T Consensus 182 i~~--------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s 251 (395)
T 1vef_A 182 VDE--------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--T 251 (395)
T ss_dssp CCT--------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--E
T ss_pred hcc--------CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--E
Confidence 742 5889999999999999998 87 4567899999999999987 3210 01223334568977 6
Q ss_pred ccccCCCCCCceEEEEEeCCCccccc
Q 002866 362 FYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 362 ~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++|+||+ +.++|++++++++++.+.
T Consensus 252 ~sK~~~~-g~~~G~~~~~~~~~~~l~ 276 (395)
T 1vef_A 252 LAKALGG-GVPLGVAVMREEVARSMP 276 (395)
T ss_dssp ECGGGGT-TSSCEEEEEEHHHHHTSC
T ss_pred EcccccC-CCceEEEEehHHHHhhhc
Confidence 7999987 678999999988666554
No 130
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.50 E-value=1.1e-13 Score=147.59 Aligned_cols=168 Identities=13% Similarity=0.043 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
....+.|++||+++|++ .++||+|+|+|+.+++.++.+++|++|++.. ..|.++. ..++..|++++.++++.
T Consensus 39 ~~~~~l~~~la~~~~~~----~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~-~~~~~~~---~~~~~~g~~~~~v~~~~ 110 (393)
T 1mdo_A 39 PKNQELEAAFCRLTGNQ----YAVAVSSATAGMHIALMALGIGEGDEVITPS-MTWVSTL---NMIVLLGANPVMVDVDR 110 (393)
T ss_dssp HHHHHHHHHHHHHHCCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEES-SSCHHHH---HHHHHTTCEEEEECBCT
T ss_pred hHHHHHHHHHHHHhCCC----cEEEecChHHHHHHHHHHcCCCCCCEEEeCC-CccHhHH---HHHHHCCCEEEEEeccC
Confidence 46778999999999984 4999999999999999998678899988763 3455543 34566899999999986
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCC-
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR- 354 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~- 354 (872)
.++.++.++|+++|.. ++++|.++ |.||.+.|++ +.+.|+++|+++++|++|+.|. .. +...++
T Consensus 111 ~~~~~d~~~l~~~l~~--------~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~--~~-~~~~~~~ 176 (393)
T 1mdo_A 111 DTLMVTPEHIEAAITP--------QTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGT--SY-KGRHIGA 176 (393)
T ss_dssp TTCCBCHHHHHHHCCT--------TEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTC--EE-TTEETTS
T ss_pred CcCCCCHHHHHHhcCC--------CceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCC--eE-CCeecCC
Confidence 4567899999888752 47887764 5899999997 4567899999999999998764 11 222345
Q ss_pred CcEEEEccc--ccCCCCCCceEEEEEe-CCCcccccC
Q 002866 355 PDFIITSFY--RVFGFDPTGFGCLLIK-KSVMGSLQN 388 (872)
Q Consensus 355 ~DFlv~S~H--K~fG~~PtGvG~LyVR-k~~i~~L~P 388 (872)
+|++++|+| |++++ + ..|+++.+ ++.++.+.+
T Consensus 177 ~d~~~~S~~k~K~l~~-~-~~g~~~~~~~~~~~~l~~ 211 (393)
T 1mdo_A 177 RGTAIFSFHAIKNITC-A-EGGIVVTDNPQFADKLRS 211 (393)
T ss_dssp SSEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCCCCcccc-c-cceEEEeCCHHHHHHHHH
Confidence 899999999 99874 3 45677765 456665543
No 131
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.50 E-value=8.4e-14 Score=158.51 Aligned_cols=201 Identities=11% Similarity=0.051 Sum_probs=126.2
Q ss_pred CCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCch---------HHHHHHHHHHHHHhcCCCCCCC-cEEEeCCH
Q 002866 156 CGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEK---------GTVEHDIKTRIMDHLNIPENEY-GLVFTVSR 225 (872)
Q Consensus 156 AAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS---------~~~ieeARerIA~lLgA~~dEY-~VVFTsnA 225 (872)
++-.++|+.|++++.. .+.+....|+|.+ ..+.+.+|+++++++|++.+++ ..||+.++
T Consensus 61 as~n~~~~~V~eA~~~-----------~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sG 129 (490)
T 2a7v_A 61 ASENFCSRAALEALGS-----------CLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSG 129 (490)
T ss_dssp TTCCCCCHHHHHHHTS-----------GGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSH
T ss_pred CCCCCCCHHHHHHHHH-----------HHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCch
Confidence 5666678999998543 1111111245542 2444589999999999987654 45788899
Q ss_pred HHHHHHHHhhCCCCCCCeEEEecccCchhHH--HH-H--HHHHHcCcE--EEEEeccCCCCccCHHHHHHHHhhhhccCC
Q 002866 226 GSAFKLLAESYPFHTNKKLLTMFDYESQSVN--WM-A--QSAKEKGAK--VYSAWFKWPTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 226 TeALnLVaeslpf~~Gd~ILT~~DhEHnSVl--~~-~--~~AkrkGae--V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~ 298 (872)
|+|+..+..++ .++||+|++.. .+|.+.. +. . ..+...|.. +..++++..++.+|.++|++++...
T Consensus 130 t~An~~al~al-~~pGD~Vl~~~-~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~----- 202 (490)
T 2a7v_A 130 SPANLAVYTAL-LQPHDRIMGLD-LPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLF----- 202 (490)
T ss_dssp HHHHHHHHHHH-CCSCEECCC--------------------------------CCBCTTTCSBCHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHH-cCCCCEecccC-ccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhc-----
Confidence 99999999887 58999987553 2333221 11 0 011123433 3444455556889999999998642
Q ss_pred CCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCC---CCccCCCCCCCCcEEEEcccccCCCCCCceE
Q 002866 299 DSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPK---DMDSLGLSLFRPDFIITSFYRVFGFDPTGFG 374 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~---~mipLDLs~l~~DFlv~S~HK~fG~~PtGvG 374 (872)
+++|+++...+ +|...|++. .+.|+++|+++++|+||++|. ...+..+. ++|++++|+||.|++ |.| |
T Consensus 203 --~~klIi~~~s~--~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~aDiv~~S~hK~l~G-p~G-G 274 (490)
T 2a7v_A 203 --RPRLIIAGTSA--YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTLRG-ARS-G 274 (490)
T ss_dssp --CCSEEEECCSS--CCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSGGGCS-CSC-E
T ss_pred --CCcEEEEcCCC--CCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CCCEEEECCcccCcc-ccc-h
Confidence 36788775443 467889985 567899999999999986442 00122232 689999999998877 888 9
Q ss_pred EEEEeCCC
Q 002866 375 CLLIKKSV 382 (872)
Q Consensus 375 ~LyVRk~~ 382 (872)
+++.+++.
T Consensus 275 ~i~~~~~~ 282 (490)
T 2a7v_A 275 LIFYRKGV 282 (490)
T ss_dssp EEEEECSE
T ss_pred heeeccch
Confidence 99988864
No 132
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.50 E-value=6.8e-14 Score=156.57 Aligned_cols=176 Identities=14% Similarity=0.037 Sum_probs=136.6
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEE--eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHH--------HHHHHcCcE
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVF--TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMA--------QSAKEKGAK 268 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVF--TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~--------~~AkrkGae 268 (872)
.+..++++|+++|++. .++| |+|+|+|+.+++.++ +++||+|++.....|.....+. ..++..|++
T Consensus 75 ~~~Le~~lA~l~g~e~---alv~p~~~sGt~Ai~~al~al-l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~ 150 (427)
T 3i16_A 75 RDSLDAVYARVFNTES---ALVRPHFVNGTHALGAALFGN-LRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGIN 150 (427)
T ss_dssp HHHHHHHHHHHHTCSE---EEEETTCCSHHHHHHHHHHHH-CCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCE
T ss_pred HHHHHHHHHHHhCCcc---eEEeCCCccHHHHHHHHHHHH-hCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCE
Confidence 6678889999999953 4777 899999999998887 5789999877413344444333 345667999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeC----ccCcccchhcHH-HHHHHHH--CCcEEEeeccccC
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPV----QSRVTGAKYSYQ-WMALAQQ--NHWHVLLDAGSLG 341 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~----vSNvTG~i~PLe-~I~~Are--~G~~VLVDAAQ~a 341 (872)
++.++.+. ++.++.++|+++|.. .++|+||.+.. .+|.||.+.|++ +++.|++ +|+++++|.++..
T Consensus 151 ~~~v~~~~-~g~~D~e~l~~~l~~------~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~ 223 (427)
T 3i16_A 151 YKQVDLKE-DGKPNLEEIEKVLKE------DESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGE 223 (427)
T ss_dssp EEECCCCT-TSSCCHHHHHHHHHT------CTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTT
T ss_pred EEEecCcc-CCCcCHHHHHHHhhC------CCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCcc
Confidence 99999875 578999999999862 12589999999 899999999997 4567899 9999999999877
Q ss_pred CCCCccCCCCCCCCcEEEEcccccCCCCC--CceEEEEEeCCCcccccC
Q 002866 342 PKDMDSLGLSLFRPDFIITSFYRVFGFDP--TGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 342 G~~mipLDLs~l~~DFlv~S~HK~fG~~P--tGvG~LyVRk~~i~~L~P 388 (872)
+. ...+.-..++|+++.|+||+||+ + ...|+++.++++++.+..
T Consensus 224 ~~--~~~~p~~~gaDiv~~S~sK~lgg-~g~~~gG~i~~~~~li~~l~~ 269 (427)
T 3i16_A 224 FM--DTKEPTDVGADLIAGSLIKNIGG-GIAPTGGYLAGTKDCIEKTSY 269 (427)
T ss_dssp TS--SSSCGGGGTCSEEEEETTSGGGT-TTCCSCEEEEECHHHHHHHHH
T ss_pred cc--ccCCccccCCeEEEecCcccCCC-CCCceEEEEEECHHHHHHHHH
Confidence 64 12223346899999999999984 1 234999999888877754
No 133
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.49 E-value=2.5e-13 Score=145.42 Aligned_cols=207 Identities=12% Similarity=0.058 Sum_probs=137.4
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC------CCCCCCcEEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN------IPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg------A~~dEY~VVF 221 (872)
.+++|+.+...+ .|+.+++++.+ .+... ...|+.+ ....+.|++|+++++ ++++ .|+|
T Consensus 32 ~~i~l~~g~~~~~~~~~v~~a~~~-------~~~~~---~~~y~~~---~g~~~lr~~ia~~~~~~~g~~~~~~--~v~~ 96 (391)
T 3h14_A 32 RIIHMEVGQPGTGAPRGAVEALAK-------SLETD---ALGYTVA---LGLPALRQRIARLYGEWYGVDLDPG--RVVI 96 (391)
T ss_dssp CCEECCCSSCSSCSCHHHHHHHHH-------HHC----------------CCHHHHHHHHHHHHHHHCCCCCGG--GEEE
T ss_pred CeEEccCCCCCCCCCHHHHHHHHH-------HHhcC---CCCCCCC---CChHHHHHHHHHHHHHHhCCCCCHH--HEEE
Confidence 478888776554 35667776432 11110 0123322 123578888888874 5555 5999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC-CccCHHHHHHHHhhhhccCCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT-LKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~-g~Id~edLe~~I~~~~rr~~~~ 300 (872)
|+|+|+|+++++.++ .++|++|++... .|. .+...++..|+++..+|++..+ ..++.++|+++
T Consensus 97 t~g~~~al~~~~~~l-~~~gd~vl~~~p-~~~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~----------- 160 (391)
T 3h14_A 97 TPGSSGGFLLAFTAL-FDSGDRVGIGAP-GYP---SYRQILRALGLVPVDLPTAPENRLQPVPADFAGL----------- 160 (391)
T ss_dssp ESSHHHHHHHHHHHH-CCTTCEEEEEES-CCH---HHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS-----------
T ss_pred ecChHHHHHHHHHHh-cCCCCEEEEcCC-CCc---cHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc-----------
Confidence 999999999999987 478999886532 233 3345567789999999987432 24677776532
Q ss_pred CceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCCC-CccCCCCC-CCCcEEEEcccccCCCCCCceE
Q 002866 301 AAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPKD-MDSLGLSL-FRPDFIITSFYRVFGFDPTGFG 374 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~~-mipLDLs~-l~~DFlv~S~HK~fG~~PtGvG 374 (872)
++++|.+++.+|.||+++|.+ +++.|+++|+++++|.++..... -.+..+.. .+.++++.|++|+||.+..++|
T Consensus 161 ~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G 240 (391)
T 3h14_A 161 DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVG 240 (391)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCE
T ss_pred CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeE
Confidence 478999999999999999953 34567999999999999863210 00222222 3566888999999983134478
Q ss_pred EEEEeCCCcccc
Q 002866 375 CLLIKKSVMGSL 386 (872)
Q Consensus 375 ~LyVRk~~i~~L 386 (872)
+++++++.++.+
T Consensus 241 ~~~~~~~~~~~~ 252 (391)
T 3h14_A 241 WMVVPEDQVRVV 252 (391)
T ss_dssp EEECCGGGHHHH
T ss_pred EEEeCHHHHHHH
Confidence 888877766554
No 134
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.49 E-value=5.8e-14 Score=149.84 Aligned_cols=169 Identities=13% Similarity=0.120 Sum_probs=127.1
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCC-CeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTN-KKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~G-d~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p 277 (872)
..++|++||+++|++++ .|+||+|+|+|+++++.++ .++| ++|++..- .+... ...++..|+++..+|.+.
T Consensus 60 ~~~lr~~la~~~~~~~~--~v~~~~G~~~ai~~~~~~~-~~~g~d~Vl~~~p-~~~~~---~~~~~~~g~~~~~v~~~~- 131 (356)
T 1fg7_A 60 PKAVIENYAQYAGVKPE--QVLVSRGADEGIELLIRAF-CEPGKDAILYCPP-TYGMY---SVSAETIGVECRTVPTLD- 131 (356)
T ss_dssp CHHHHHHHHHHHTSCGG--GEEEESHHHHHHHHHHHHH-CCTTTCEEEECSS-SCTHH---HHHHHHHTCEEEECCCCT-
T ss_pred HHHHHHHHHHHhCCChH--HEEEcCCHHHHHHHHHHHH-hCCCCCEEEEeCC-ChHHH---HHHHHHcCCEEEEeeCCC-
Confidence 46899999999999875 5999999999999999987 4688 88887632 23333 344566799999998874
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH----HHHHHCCcEEEeeccccCCCCCcc-CCC-C
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM----ALAQQNHWHVLLDAGSLGPKDMDS-LGL-S 351 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I----~~Are~G~~VLVDAAQ~aG~~mip-LDL-s 351 (872)
+..++.++|++++. ++++|.+++.+|.||.++|.+.+ +.|+ +|+++++|.++.......+ +++ .
T Consensus 132 ~~~~d~~~l~~~i~---------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~ 201 (356)
T 1fg7_A 132 NWQLDLQGISDKLD---------GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLA 201 (356)
T ss_dssp TSCCCHHHHHTSCT---------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTT
T ss_pred CCCCCHHHHHHHhc---------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHh
Confidence 45678887766552 48899999999999999998644 3345 8999999999763220011 232 3
Q ss_pred CCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 352 LFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 352 ~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
..+.++++.|++|+|| +.| +|++++++++++.+.
T Consensus 202 ~~~~~i~~~s~sK~~g--~~G~r~G~~~~~~~~~~~l~ 237 (356)
T 1fg7_A 202 EYPHLAILRTLSKAFA--LAGLRCGFTLANEEVINLLM 237 (356)
T ss_dssp TCTTEEEEEESSSTTC--CGGGCCEEEEECHHHHHHHH
T ss_pred hCCCEEEEecchHhhc--CchhhhEEEEeCHHHHHHHH
Confidence 4567899999999998 457 799999887766554
No 135
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.48 E-value=1.1e-13 Score=150.07 Aligned_cols=211 Identities=11% Similarity=0.038 Sum_probs=143.4
Q ss_pred ceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----CCCCCC-CcEEEeC
Q 002866 150 KVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----NIPENE-YGLVFTV 223 (872)
Q Consensus 150 ~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----gA~~dE-Y~VVFTs 223 (872)
++.|+.+...+ .++.+++++.+. . .. ..+ ..|+.+. ...+.|++||+++ |++.+. ..|+||+
T Consensus 49 ~idl~~g~~~~~~~~~v~~a~~~~--~--~~--~~~---~~y~~~~---g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~ 116 (404)
T 2o1b_A 49 LINMAVGIPDGPTPQGIIDHFQKA--L--TI--PEN---QKYGAFH---GKEAFKQAIVDFYQRQYNVTLDKEDEVCILY 116 (404)
T ss_dssp CEECCCCSCSSCCCHHHHHHHHHH--T--TC--HHH---HSCCCTT---CCHHHHHHHHHHHHHHHCCCCCTTTSEEEES
T ss_pred EEecCCcCCCCCCCHHHHHHHHHH--H--hC--CCC---CCCCCCC---CCHHHHHHHHHHHHHHhCCCCCCcccEEEcC
Confidence 67777665543 456676664321 0 00 001 1244321 2357888888888 875221 2699999
Q ss_pred CHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCce
Q 002866 224 SRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAG 303 (872)
Q Consensus 224 nATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~ 303 (872)
|+|+|+.+++.++ .++|++|++..- .|... ...++..|+++..+|.+..+..++.++|++++.. +++
T Consensus 117 G~~~al~~~~~~l-~~~gd~Vl~~~p-~y~~~---~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~--------~~~ 183 (404)
T 2o1b_A 117 GTKNGLVAVPTCV-INPGDYVLLPDP-GYTDY---LAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIID--------KTK 183 (404)
T ss_dssp SHHHHHHHHHHHH-CCTTCEEEEEES-CCSSH---HHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH--------HEE
T ss_pred CcHHHHHHHHHHh-cCCCCEEEEcCC-CchhH---HHHHHHCCCEEEEeccCcccCcCCHHHHHHhhcc--------Cce
Confidence 9999999999987 467899876532 23333 3345668999999998753335788999888853 378
Q ss_pred EEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCCC-CccCCCCCC----CCcEEEEcccccCCCCCCc--
Q 002866 304 LFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPKD-MDSLGLSLF----RPDFIITSFYRVFGFDPTG-- 372 (872)
Q Consensus 304 LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~~-mipLDLs~l----~~DFlv~S~HK~fG~~PtG-- 372 (872)
+|.+++.+|.||.++|.+ +++.|+++|+++++|.++..... -.+.++..+ +.|+++.|++|+||. .|
T Consensus 184 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~--~G~r 261 (404)
T 2o1b_A 184 LIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNM--SGFR 261 (404)
T ss_dssp EEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTC--GGGC
T ss_pred EEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccC--chhh
Confidence 999999999999999864 34667899999999999865320 012233222 568999999999983 36
Q ss_pred eEEEEEeCCCccccc
Q 002866 373 FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 373 vG~LyVRk~~i~~L~ 387 (872)
+|+++.++++++.+.
T Consensus 262 ~G~~~~~~~~~~~l~ 276 (404)
T 2o1b_A 262 VGFAVGNKDMIQALK 276 (404)
T ss_dssp CEEEEECHHHHHHHH
T ss_pred eEeEecCHHHHHHHH
Confidence 799998877666553
No 136
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.47 E-value=1.4e-13 Score=147.78 Aligned_cols=211 Identities=12% Similarity=0.034 Sum_probs=143.5
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC------CCCCCCcEEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN------IPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg------A~~dEY~VVF 221 (872)
+.|+|+++.... .|+.+++++.+ ..... ....|+.+. ...+.|+.||++++ +++++ .|+|
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~--------~~~~~-~~~~y~~~~---g~~~l~~~la~~~~~~~~~~~~~~~-~i~~ 90 (410)
T 3e2y_A 24 SVVNLGQGFPDISPPSYVKEELSK--------AAFID-NMNQYTRGF---GHPALVKALSCLYGKIYQRQIDPNE-EILV 90 (410)
T ss_dssp TSEECSSCCCCSCCCHHHHHHHHH--------HHTCG-GGGSCCCTT---CCHHHHHHHHHHHHHHHTSCCCTTT-SEEE
T ss_pred CeEEecCCCCCCCCCHHHHHHHHH--------HHhCc-cccCCCCCC---ChHHHHHHHHHHHHHHhCCCCCCCC-CEEE
Confidence 489999998763 56777776432 11110 011344332 13467888888877 65522 5999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC----------CCCccCHHHHHHHHh
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW----------PTLKLCSTDLRKQIS 291 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~----------p~g~Id~edLe~~I~ 291 (872)
|+|+|+|+.+++..+ .++|++|++... .|... ...++..|+++..++++. .+..++.++|++++.
T Consensus 91 ~~g~~~a~~~~~~~~-~~~gd~vl~~~p-~~~~~---~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~ 165 (410)
T 3e2y_A 91 AVGAYGSLFNSIQGL-VDPGDEVIIMVP-FYDCY---EPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS 165 (410)
T ss_dssp ESHHHHHHHHHHHHH-CCTTCEEEEEES-CCTTH---HHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC
T ss_pred eCCcHHHHHHHHHHh-cCCCCEEEEeCC-Cchhh---HHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC
Confidence 999999999999987 578998876532 23333 334566899999998862 234578888877663
Q ss_pred hhhccCCCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccC----CCCCccCCCCCC----CCcEEE
Q 002866 292 SKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLG----PKDMDSLGLSLF----RPDFII 359 (872)
Q Consensus 292 ~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~a----G~~mipLDLs~l----~~DFlv 359 (872)
+++++|.++..+|.||.++| ++ +++.|+++|+++++|.++.. |+ ....+..+ +.++++
T Consensus 166 --------~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~i~~ 235 (410)
T 3e2y_A 166 --------SKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH--THVKIATLPGMWERTITI 235 (410)
T ss_dssp --------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSTTCGGGEEEE
T ss_pred --------CCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC--CCCCHHHcCCccCeEEEE
Confidence 25899999999999999975 44 34567999999999999863 32 12233322 345899
Q ss_pred EcccccCCCCCCceEEEEEeCCCccccc
Q 002866 360 TSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 360 ~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.|++|.||.+..++|+++.+++.++.+.
T Consensus 236 ~S~sK~~g~~G~r~G~~~~~~~~~~~~~ 263 (410)
T 3e2y_A 236 GSAGKTFSVTGWKLGWSIGPAHLIKHLQ 263 (410)
T ss_dssp EEHHHHSSCGGGCCEEEECCHHHHHHHH
T ss_pred ecchhhcCCCCceEEEEEECHHHHHHHH
Confidence 9999999831123899988877665543
No 137
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.47 E-value=6.1e-13 Score=145.85 Aligned_cols=206 Identities=15% Similarity=0.078 Sum_probs=141.6
Q ss_pred CCceecccCCC---CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCC
Q 002866 148 SPKVCLDYCGF---GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVS 224 (872)
Q Consensus 148 ~~~IYLDyAAt---gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsn 224 (872)
.+..|||+.+. .++++.+++++.. ....|++. ....+.|++||+++|++ .++||+|
T Consensus 40 ~~~~ylD~~~~~~~~~~~~~~~~a~~~--------------~~~~y~~~---~~~~~l~~~la~~~~~~----~~~~~~~ 98 (456)
T 2ez2_A 40 SKDIYIDLLTDSGTNAMSDKQWAGMMM--------------GDEAYAGS---ENFYHLERTVQELFGFK----HIVPTHQ 98 (456)
T ss_dssp GGGCSEECSCSSSCCCCCHHHHHHHTT--------------CCCCSSSC---HHHHHHHHHHHHHHCCS----EEEEESS
T ss_pred cccceeeeccccCCccCCHHHHHHhhc--------------chhhcccC---hhHHHHHHHHHHHhCCC----cEEEeCC
Confidence 34789998543 3567777776421 01234422 34678999999999974 4999999
Q ss_pred HHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC---------CCccCHHHHHHHHhhhhc
Q 002866 225 RGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP---------TLKLCSTDLRKQISSKKR 295 (872)
Q Consensus 225 ATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p---------~g~Id~edLe~~I~~~~r 295 (872)
+|+|+.+++.++ +++|| |+....| |.++. ..++..|+++..++++.. ++.++.++|+++|...++
T Consensus 99 gt~a~~~al~~l-~~~gd-i~~~~~~-~~~~~---~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~ 172 (456)
T 2ez2_A 99 GRGAENLLSQLA-IKPGQ-YVAGNMY-FTTTR---YHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA 172 (456)
T ss_dssp HHHHHHHHHHHH-CCTTC-EEEESSC-CHHHH---HHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG
T ss_pred cHHHHHHHHHHh-CCCCC-Eeccccc-cchhH---HHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccc
Confidence 999999999887 67899 6655443 35543 234567999999988621 256899999999975310
Q ss_pred cCCCCCceEEEEeCccC-cccchhc---HH-HHHHHHHCCcEEEeeccccCC---------CCCccCCCC------CCCC
Q 002866 296 RKKDSAAGLFVFPVQSR-VTGAKYS---YQ-WMALAQQNHWHVLLDAGSLGP---------KDMDSLGLS------LFRP 355 (872)
Q Consensus 296 r~~~~~T~LVa~p~vSN-vTG~i~P---Le-~I~~Are~G~~VLVDAAQ~aG---------~~mipLDLs------~l~~ 355 (872)
...++|.+...+| .||..+| ++ +++.|+++|+++++|.+|..| .......+. ...+
T Consensus 173 ----~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 248 (456)
T 2ez2_A 173 ----ENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYA 248 (456)
T ss_dssp ----GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTC
T ss_pred ----cceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccC
Confidence 1248888887777 9999998 65 456789999999999998764 100111110 1247
Q ss_pred cEEEEcccccCCCCCCceEEEEEe-CCCcccc
Q 002866 356 DFIITSFYRVFGFDPTGFGCLLIK-KSVMGSL 386 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGvG~LyVR-k~~i~~L 386 (872)
|++++|+||+++. | ..|+++.+ +++++.+
T Consensus 249 d~~~~S~kk~~~~-~-~gG~~~~~~~~~~~~~ 278 (456)
T 2ez2_A 249 DGCTMSGKKDCLV-N-IGGFLCMNDDEMFSSA 278 (456)
T ss_dssp SEEEEETTTTTCC-S-SCEEEEESCHHHHHHH
T ss_pred CEEEEeCcccCCC-C-ceeEEEECCHHHHHHH
Confidence 9999999999775 4 36888774 4555444
No 138
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.47 E-value=1.1e-13 Score=151.94 Aligned_cols=207 Identities=14% Similarity=0.143 Sum_probs=139.1
Q ss_pred CceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHH
Q 002866 149 PKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGSA 228 (872)
Q Consensus 149 ~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATeA 228 (872)
+..|||+.+..+. +.+.+++.+ .+. . ....|+++ ....+.|++|++++|.+ .|+||+|+|+|
T Consensus 42 g~~ylD~~~~~~~-~~v~~a~~~-------~~~-~--~~~~y~~~---~~~~~l~~~la~~~~~~----~v~~t~ggt~A 103 (467)
T 1ax4_A 42 SAVYIDLLTDSGT-NAMSDHQWA-------AMI-T--GDEAYAGS---RNYYDLKDKAKELFNYD----YIIPAHQGRGA 103 (467)
T ss_dssp GGCSEECSCSSSC-CCEEHHHHH-------HHH-T--CCCCSSSC---HHHHHHHHHHHHHHCCC----EEEEESSHHHH
T ss_pred CceeeecccCcCC-HHHHHHHHH-------HHh-h--cccccccC---ccHHHHHHHHHHHcCCC----cEEEcCCcHHH
Confidence 3689999888765 223332211 111 1 11245543 24567899999999972 49999999999
Q ss_pred HHHHHhhCCCC----CCCe---EEEecccCchhHHHHHHHHHHcCcEEEEEeccC---------CCCccCHHHHHHHHhh
Q 002866 229 FKLLAESYPFH----TNKK---LLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW---------PTLKLCSTDLRKQISS 292 (872)
Q Consensus 229 LnLVaeslpf~----~Gd~---ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~---------p~g~Id~edLe~~I~~ 292 (872)
+.+++..+ .+ +|++ |++. ..++.... ......|+++..++... .++.++.++|+++|..
T Consensus 104 ~~~al~~~-~~~~~~~Gd~~~~viv~-~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~ 178 (467)
T 1ax4_A 104 ENILFPVL-LKYKQKEGKAKNPVFIS-NFHFDTTA---AHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQ 178 (467)
T ss_dssp HHHHHHHH-HHHHHHTTCCSSCEEEE-SSCCHHHH---HHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHH
T ss_pred HHHHHHHH-HHhhccCCCccceEEEe-ccccchhh---HHHhccCCceecccccccccccccCCcccccCHHHHHHHHHh
Confidence 99988876 34 7888 7776 43334332 23345688887665421 1356899999999974
Q ss_pred hhccCCCCCceEEEEeCccCcc-cchhcHH----HHHHHHHCCcEEEeeccccC-----------CCCCccCCCCCC---
Q 002866 293 KKRRKKDSAAGLFVFPVQSRVT-GAKYSYQ----WMALAQQNHWHVLLDAGSLG-----------PKDMDSLGLSLF--- 353 (872)
Q Consensus 293 ~~rr~~~~~T~LVa~p~vSNvT-G~i~PLe----~I~~Are~G~~VLVDAAQ~a-----------G~~mipLDLs~l--- 353 (872)
.. ..+|++|.+...+|.+ |.++|.+ +++.|+++|+++++|++|+. ++ ..+++..+
T Consensus 179 ~~----~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 252 (467)
T 1ax4_A 179 HG----ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKY--KNATIKEVIFD 252 (467)
T ss_dssp HC----GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGG--TTCCHHHHHHH
T ss_pred cC----CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhcccccccc--CCCchhhhhhh
Confidence 21 1258999999999999 8887764 34678999999999998765 33 23333322
Q ss_pred ---CCcEEEEcccccCCCCCCceEEEEEe-C-CCcccc
Q 002866 354 ---RPDFIITSFYRVFGFDPTGFGCLLIK-K-SVMGSL 386 (872)
Q Consensus 354 ---~~DFlv~S~HK~fG~~PtGvG~LyVR-k-~~i~~L 386 (872)
.+|++++|+||+||. |.| |+++.+ + ++++.+
T Consensus 253 ~~~~~d~~~~s~sK~~g~-~~G-g~~~~~d~~~l~~~~ 288 (467)
T 1ax4_A 253 MYKYADALTMSAKKDPLL-NIG-GLVAIRDNEEIFTLA 288 (467)
T ss_dssp HGGGCSEEEEETTSTTCC-SSC-EEEEESSCHHHHHHH
T ss_pred hccccceEEEeccccCCC-Ccc-eEEEeCCHHHHHHHH
Confidence 479999999999996 655 666666 4 555444
No 139
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.46 E-value=1.1e-12 Score=141.00 Aligned_cols=166 Identities=11% Similarity=0.082 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC------CCCCCCeEEEecccCchhHHHHHHHHHHcCcEEE
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY------PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVY 270 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl------pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~ 270 (872)
....++|++||+++|++ .++||+|+|+|+++++.++ .+++|++|++.. .+|.++.. .++..|++++
T Consensus 34 ~~~~~l~~~la~~~~~~----~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~-~~~~~~~~---~~~~~g~~~~ 105 (390)
T 3b8x_A 34 EYVKQYETQFAKTFGSK----YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPA-VSWSTTYY---PLQQYGLRVK 105 (390)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEES-SSCHHHHH---HHHHTTCEEE
T ss_pred hHHHHHHHHHHHHHCCC----cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECC-CCcHHHHH---HHHHcCCEEE
Confidence 46789999999999985 3899999999999999988 467899988763 45555543 2345799999
Q ss_pred EEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCC
Q 002866 271 SAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLG 349 (872)
Q Consensus 271 ~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLD 349 (872)
.++++..++.++.++|+++|.. +|++|.++ |.+|...|++. .+.|+++|+++++|++|+.|. .. +
T Consensus 106 ~~~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~---~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~--~~-~ 171 (390)
T 3b8x_A 106 FVDIDINTLNIDIESLKEAVTD--------STKAILTV---NLLGNPNNFDEINKIIGGRDIILLEDNCESMGA--TF-N 171 (390)
T ss_dssp EECBCTTTCSBCHHHHHHHCCT--------TEEEEEEE---CGGGCCCCHHHHHHHHTTSCCEEEEECTTCTTC--EE-T
T ss_pred EEecCccccCcCHHHHHHHhCc--------CCeEEEEE---CCccChhhHHHHHHHHHHcCCEEEEECcCcccC--EE-C
Confidence 9999865578899999988853 48888886 47899999984 567899999999999999886 23 5
Q ss_pred CCCCCC--cEEEEc---ccccCCCCCCceEEEEEeC-CCccccc
Q 002866 350 LSLFRP--DFIITS---FYRVFGFDPTGFGCLLIKK-SVMGSLQ 387 (872)
Q Consensus 350 Ls~l~~--DFlv~S---~HK~fG~~PtGvG~LyVRk-~~i~~L~ 387 (872)
...+++ |+.++| +||+.+ |.| |+++.++ .+.+.++
T Consensus 172 ~~~~g~~~~~~~~s~~~~k~~~~--g~g-G~~~~~~~~l~~~~~ 212 (390)
T 3b8x_A 172 NKCAGTFGLMGTFSSFYSNHIAT--MEG-GCIVTDDEEIYHILL 212 (390)
T ss_dssp TEETTSSSSEEEEECCTTSSSCS--SSC-EEEEESCHHHHHHHH
T ss_pred CcccccccceEEEEccCCCCCcc--CCc-eEEEeCCHHHHHHHH
Confidence 555554 666655 467543 567 8888876 4444443
No 140
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.46 E-value=1.5e-12 Score=139.12 Aligned_cols=210 Identities=10% Similarity=0.001 Sum_probs=140.3
Q ss_pred ceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----CC---CCCCCcEEE
Q 002866 150 KVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----NI---PENEYGLVF 221 (872)
Q Consensus 150 ~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----gA---~~dEY~VVF 221 (872)
++.|+.+.... .|+.+++++.+ .+.....|+.+.. ..+.|+.|++++ |. +++ ..|+|
T Consensus 32 ~i~l~~~~~~~~~~~~v~~a~~~-----------~~~~~~~y~~~~g---~~~lr~~la~~l~~~~g~~~~~~~-~~i~~ 96 (396)
T 3jtx_A 32 AVPLHIGEPKHPTPKVITDALTA-----------SLHELEKYPLTAG---LPELRQACANWLKRRYDGLTVDAD-NEILP 96 (396)
T ss_dssp CEECSCCSCCSCCCHHHHHHHHH-----------TGGGGGSCCCTTC---CHHHHHHHHHHHHHHTTTCCCCTT-TSEEE
T ss_pred eEEeCCcCCCCCCCHHHHHHHHH-----------HhhhccCCCCCCC---cHHHHHHHHHHHHHhcCCCCCCCC-CeEEE
Confidence 78888776543 45677776432 1111123443321 235666666655 74 354 14999
Q ss_pred eCCHHHHHHHHHhhCCCCCC-----CeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhcc
Q 002866 222 TVSRGSAFKLLAESYPFHTN-----KKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRR 296 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~G-----d~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr 296 (872)
|+|+|+|+.+++..+ .++| +.|++..- .|. .+...++..|+++..+|++..+..++.++|++++..
T Consensus 97 t~g~~~al~~~~~~~-~~~g~~~~~d~vl~~~p-~~~---~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~---- 167 (396)
T 3jtx_A 97 VLGSREALFSFVQTV-LNPVSDGIKPAIVSPNP-FYQ---IYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWK---- 167 (396)
T ss_dssp ESSHHHHHHHHHHHH-CCC---CCCCEEEEEES-CCH---HHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH----
T ss_pred cCCcHHHHHHHHHHH-hCCCCccCCCEEEEcCC-CcH---hHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhcc----
Confidence 999999999999887 3565 57776522 233 334456778999999998654456788999888864
Q ss_pred CCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccccCCCCC--ccCCCC--------CCCCcEEEEcc
Q 002866 297 KKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSLGPKDM--DSLGLS--------LFRPDFIITSF 362 (872)
Q Consensus 297 ~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~aG~~m--ipLDLs--------~l~~DFlv~S~ 362 (872)
++++|.++..+|.||.++|.+. ++.|+++|+++++|.++...... .++.+- ..+.++++.|+
T Consensus 168 ----~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 243 (396)
T 3jtx_A 168 ----RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSL 243 (396)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEES
T ss_pred ----CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEecc
Confidence 4889999999999999999863 35678999999999997642100 122211 25788999999
Q ss_pred cccCCCCCCceEEEEEeCCCccccc
Q 002866 363 YRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 363 HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
+|.||.+-.++|+++..+++++.+.
T Consensus 244 sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (396)
T 3jtx_A 244 SKRSNVPGLRSGFVAGDAELLKNFL 268 (396)
T ss_dssp TTTSSCGGGCCEEEEECHHHHHHHH
T ss_pred ccccCCcccceEEEEeCHHHHHHHH
Confidence 9987741123788887766655543
No 141
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.45 E-value=4.8e-13 Score=148.06 Aligned_cols=161 Identities=14% Similarity=0.038 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhH-HHHHHHHHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSV-NWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSV-l~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..++.+++++++.|++ .++||+|+++|+.+++.++ .++||+|++... .|... ..+...+++.|++++.++.+
T Consensus 82 ~~~~l~~~la~~~g~~----~~~~~~sG~~Ai~~al~~l-~~~Gd~Vi~~~~-~y~~~~~~~~~~~~~~g~~~~~v~~~- 154 (414)
T 3ndn_A 82 TVSVFEERLRLIEGAP----AAFATASGMAAVFTSLGAL-LGAGDRLVAARS-LFGSCFVVCSEILPRWGVQTVFVDGD- 154 (414)
T ss_dssp HHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHTT-CCTTCEEEEESC-CCHHHHHHHHTHHHHTTCEEEEECTT-
T ss_pred HHHHHHHHHHHHHCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEcCC-ccchHHHHHHHHHHHcCcEEEEeCCC-
Confidence 4678999999999973 3899999999999998887 688999887643 23333 33444467789999998764
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
+.++|+++|.. +|++|.++..+|.||.+.|++. .+.|+++|+++++|.++..|. ....+ .+++
T Consensus 155 -----d~~~l~~ai~~--------~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~--~~~~~-~~g~ 218 (414)
T 3ndn_A 155 -----DLSQWERALSV--------PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPL--LQQGF-PLGV 218 (414)
T ss_dssp -----CHHHHHHHTSS--------CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHH--HCCCG-GGTC
T ss_pred -----CHHHHHHhcCC--------CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccc--cCCch-hcCC
Confidence 57888887742 5899999999999999999984 567899999999999988664 11222 5689
Q ss_pred cEEEEcccccCCCCCCc---eEEEEEeCCCc
Q 002866 356 DFIITSFYRVFGFDPTG---FGCLLIKKSVM 383 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtG---vG~LyVRk~~i 383 (872)
|+++.|++|+|| +.| .|+++.+++.+
T Consensus 219 div~~S~sK~l~--~~G~~~~G~vv~~~~~~ 247 (414)
T 3ndn_A 219 DVVVYSGTKHID--GQGRVLGGAILGDREYI 247 (414)
T ss_dssp SEEEEETTTTTT--CSSCCCCEEEEECHHHH
T ss_pred CeEeccCCcccc--CCCCceEEEEEECHHHH
Confidence 999999999998 446 69888877644
No 142
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.45 E-value=4.7e-13 Score=145.86 Aligned_cols=218 Identities=8% Similarity=0.020 Sum_probs=142.8
Q ss_pred CceecccCCCCC------CcHHHHHHhhhcccccHHHHHHhhccCcCc-CCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDYCGFGL------FSYIQTLHYWESSTFSLSEITANLSNHALY-GGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp------~p~~VieA~~e~~~F~ls~i~~nL~~~~~y-gNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+..|||+++..+ .++.+++++.+ .+ .... +..+ +.++ ....+.+++++++++++++ .|+|
T Consensus 42 g~~ylD~~~~~~~~~lg~~~p~v~~a~~~-------~~-~~~~-~~~~~~~~~--~~~~~l~~~la~~~~~~~~--~v~~ 108 (429)
T 1s0a_A 42 GRRLVDGMSSWWAAIHGYNHPQLNAAMKS-------QI-DAMS-HVMFGGITH--APAIELCRKLVAMTPQPLE--CVFL 108 (429)
T ss_dssp SCEEEESSTTTTTCTTCBSCHHHHHHHHH-------HH-HHCS-CCCCSSEEC--HHHHHHHHHHHHHSCTTCC--EEEE
T ss_pred CCEEEEcCccHhhccCCCCCHHHHHHHHH-------HH-Hhcc-cccccccCC--HHHHHHHHHHHHhCCCCCC--EEEE
Confidence 468999976642 46788887543 12 1111 0001 1122 3456778899999998766 5999
Q ss_pred eCCHHHHHHHHHhhCC-C-----CCCCeEEEecccCchhHHHHHHHHH-----HcC-----cEEEEEeccC-----CCCc
Q 002866 222 TVSRGSAFKLLAESYP-F-----HTNKKLLTMFDYESQSVNWMAQSAK-----EKG-----AKVYSAWFKW-----PTLK 280 (872)
Q Consensus 222 TsnATeALnLVaeslp-f-----~~Gd~ILT~~DhEHnSVl~~~~~Ak-----rkG-----aeV~~Vpvd~-----p~g~ 280 (872)
|+|+|+|+++++..+. + ++|++||+.....|........... +.+ ..+..++++. ..+.
T Consensus 109 ~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (429)
T 1s0a_A 109 ADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDE 188 (429)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCG
T ss_pred eCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchH
Confidence 9999999999877531 1 1478888765334554433221110 111 1355566542 1235
Q ss_pred cCHHHHHHHHhhhhccCCCCCceEEEEeCc-cCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCC
Q 002866 281 LCSTDLRKQISSKKRRKKDSAAGLFVFPVQ-SRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLS 351 (872)
Q Consensus 281 Id~edLe~~I~~~~rr~~~~~T~LVa~p~v-SNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs 351 (872)
++.++|+++|... ..++++|.+..+ +|+||.++| ++. .+.|+++|+++++|.+|. .|.. +..++..
T Consensus 189 ~d~~~l~~~l~~~-----~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~ 263 (429)
T 1s0a_A 189 RDMVGFARLMAAH-----RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHA 263 (429)
T ss_dssp GGGHHHHHHHHHH-----TTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGG
T ss_pred HHHHHHHHHHHhC-----CCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhc
Confidence 7889999888642 125789999998 999999998 874 567899999999999986 4321 1123333
Q ss_pred CCCCcEEEEcccccCCCCC-CceEEEEEeCCCccccc
Q 002866 352 LFRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 352 ~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~ 387 (872)
...+|++++| |.||+ + .++|++++++++++.+.
T Consensus 264 ~~~~d~~t~s--K~l~~-G~~~iG~~~~~~~~~~~l~ 297 (429)
T 1s0a_A 264 EIAPDILCLG--KALTG-GTMTLSATLTTREVAETIS 297 (429)
T ss_dssp TCCCSEEEEC--GGGGT-SSSCCEEEEECHHHHHHHH
T ss_pred CCCCCEEEec--ccccC-CCccceEEEeCHHHHHHhh
Confidence 4578999877 88886 6 78999999988776664
No 143
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.45 E-value=8e-14 Score=152.02 Aligned_cols=179 Identities=12% Similarity=0.093 Sum_probs=121.8
Q ss_pred HHHHHHHHHHhc------CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCC--------------eEEEecccCchhHHHH
Q 002866 199 EHDIKTRIMDHL------NIPENEYGLVFTVSRGSAFKLLAESYPFHTNK--------------KLLTMFDYESQSVNWM 258 (872)
Q Consensus 199 ieeARerIA~lL------gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd--------------~ILT~~DhEHnSVl~~ 258 (872)
+.+.|++||+++ +++++ .|+||+|+|+|+++++.++ .++|+ ++++..+..+......
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~--~i~~t~G~t~al~~~~~~l-~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~ 161 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSE--NIALTNGSQNAFFYLFNLF-GGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDV 161 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGG--GEEEESSHHHHHHHHHHHS-SEEEECC-------CEEEEEEEESSSSCCGGGTTC
T ss_pred CHHHHHHHHHHHHhhcCCCCCHH--HEEEecCcHHHHHHHHHHH-hCCCccccccccccccccceEEEeCCCCccchhhc
Confidence 467999999998 66765 5999999999999999988 45666 6765422122222110
Q ss_pred ---HHHHHHcCcEEEEEeccCCCC----ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH---H-HHHHHH
Q 002866 259 ---AQSAKEKGAKVYSAWFKWPTL----KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY---Q-WMALAQ 327 (872)
Q Consensus 259 ---~~~AkrkGaeV~~Vpvd~p~g----~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL---e-~I~~Ar 327 (872)
.......|+.+..++++..++ .++.++|++++... ++++++|.+++.+|.||+++|. + +++.|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~-----~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~ 236 (444)
T 3if2_A 162 HVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALK-----EGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAK 236 (444)
T ss_dssp CSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHH-----TTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred ccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhc-----CCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHH
Confidence 011234588888888764222 57999998875321 2368999999999999999994 4 345689
Q ss_pred HCCcEEEeeccccCCCCC---ccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 328 QNHWHVLLDAGSLGPKDM---DSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 328 e~G~~VLVDAAQ~aG~~m---ipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
++|+++++|.++..+... ..+.....+.++++.|++|+ +.+..++|+++.++++++.+
T Consensus 237 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~ 297 (444)
T 3if2_A 237 RYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPGMRTGIIVADAKVIEAV 297 (444)
T ss_dssp HTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGGGCCEEEECCHHHHHHH
T ss_pred HCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc-cCCCCceEEEEECHHHHHHH
Confidence 999999999998642210 11222234678999999997 53134578777766655544
No 144
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.44 E-value=9.4e-13 Score=144.58 Aligned_cols=163 Identities=13% Similarity=0.124 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC--------CCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP--------FHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp--------f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
....++|++||+++|++ .++||+|+|+|+++++.++. +++|++|++. ...|.++... ++..|++
T Consensus 62 ~~~~~l~~~la~~~g~~----~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~-~~~~~~~~~~---~~~~g~~ 133 (437)
T 3bb8_A 62 RFNDAFEKKLGEYLGVP----YVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITV-AAGFPTTVNP---TIQNGLI 133 (437)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEEC-SSSCHHHHHH---HHHTTCE
T ss_pred hHHHHHHHHHHHHHCCC----cEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEEC-CCCcHHHHHH---HHHcCCE
Confidence 45789999999999985 38999999999999999884 6789998876 3456655432 3457999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCcc
Q 002866 269 VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDS 347 (872)
Q Consensus 269 V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mip 347 (872)
++.++++..++.++.++|+++|.. +|++|.+++ .+|...|++ +.+.|+++|+++++|++|+.|. ..
T Consensus 134 ~~~v~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~--~~ 200 (437)
T 3bb8_A 134 PVFVDVDIPTYNVNASLIEAAVSD--------KTKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGS--TY 200 (437)
T ss_dssp EEECCEETTTTEECGGGHHHHCCT--------TEEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTC--EE
T ss_pred EEEEeccCccCCcCHHHHHHhcCC--------CCeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCc--eE
Confidence 999998764578899999887742 588998876 689999997 4567899999999999999886 33
Q ss_pred CCCCCCC--CcEEEEcccccCCCCCCce-EEEEEeCCC
Q 002866 348 LGLSLFR--PDFIITSFYRVFGFDPTGF-GCLLIKKSV 382 (872)
Q Consensus 348 LDLs~l~--~DFlv~S~HK~fG~~PtGv-G~LyVRk~~ 382 (872)
+...++ +|++++|++|.++. |.|. |+++.++..
T Consensus 201 -~~~~~~~~~d~~~~s~~~~k~l-~~g~gg~~~~~~~~ 236 (437)
T 3bb8_A 201 -DGKMAGTFGDIGTVSFYPAKHI-TMGEGGAVFTQSAE 236 (437)
T ss_dssp -TTEETTSSSSEEEEECSTTSSS-CCSSCEEEEESCHH
T ss_pred -CCeecccccCEEEEECcCCcCC-CCCCeEEEEeCCHH
Confidence 555556 89998886554443 3454 444444343
No 145
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.44 E-value=9.5e-13 Score=143.37 Aligned_cols=176 Identities=10% Similarity=0.090 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHhcC--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 196 GTVEHDIKTRIMDHLN--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 196 ~~~ieeARerIA~lLg--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+..+++++.+++.+| ++++ .|+||+|+|+|+++++..+ .++|++|++... .|. .+...++..|.++..+|
T Consensus 99 ~~l~~~l~~~l~~~~g~~~~~~--~v~~~~g~~ea~~~a~~~~-~~~gd~Vi~~~~-~y~---~~~~~~~~~g~~~~~~~ 171 (421)
T 3l8a_A 99 DDLYQAVIDWERKEHDYAVVKE--DILFIDGVVPAISIALQAF-SEKGDAVLINSP-VYY---PFARTIRLNDHRLVENS 171 (421)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGG--GEEEESCHHHHHHHHHHHH-SCTEEEEEEEES-CCH---HHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEECCC-CcH---HHHHHHHHCCCEEEecc
Confidence 5677788888888888 4444 6999999999999999987 467888876532 233 23445566899999999
Q ss_pred ccCCCC--ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH---H-HHHHHHHCCcEEEeeccccC----CC
Q 002866 274 FKWPTL--KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSLG----PK 343 (872)
Q Consensus 274 vd~p~g--~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~a----G~ 343 (872)
+++..+ .++.++|+++|.. +++++|.++..+|+||.++|. + +.+.|+++|+++++|.+|.. |+
T Consensus 172 ~~~~~~~~~~d~~~le~~i~~-------~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~ 244 (421)
T 3l8a_A 172 LQIINGRFEIDFEQLEKDIID-------NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGN 244 (421)
T ss_dssp CEEETTEEECCHHHHHHHHHH-------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC
T ss_pred ccccCCCeeeCHHHHHHHhhc-------cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 863233 5799999999863 258999999999999999654 4 34567999999999999864 22
Q ss_pred CCccCCCCC-----CCCcEEEEcccccCCCCCCceEEEEEe-CCCccccc
Q 002866 344 DMDSLGLSL-----FRPDFIITSFYRVFGFDPTGFGCLLIK-KSVMGSLQ 387 (872)
Q Consensus 344 ~mipLDLs~-----l~~DFlv~S~HK~fG~~PtGvG~LyVR-k~~i~~L~ 387 (872)
....+.. .+.++++.|++|+||.+...+|+++++ +++.+.+.
T Consensus 245 --~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~ 292 (421)
T 3l8a_A 245 --THHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQ 292 (421)
T ss_dssp --CCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHH
T ss_pred --CCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHH
Confidence 1222323 245599999999998311235999887 55555443
No 146
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.44 E-value=1.3e-12 Score=140.26 Aligned_cols=205 Identities=12% Similarity=0.004 Sum_probs=140.5
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCC------CCCCcEEE--
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIP------ENEYGLVF-- 221 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~------~dEY~VVF-- 221 (872)
-+|+|+.+++++.+.+.+++.+ +..... ...|..+. -..+.|+.||++++.. ++ .|+|
T Consensus 36 g~~~d~~~~~~~~~~v~~a~~~--------~~~~~~-~~~Y~~~~---g~~~lr~~ia~~~~~~~~~~~~~~--~i~~v~ 101 (401)
T 7aat_A 36 GAYRDDNGKPYVLNCVRKAEAM--------IAAKKM-DKEYLPIA---GLADFTRASAELALGENSEAFKSG--RYVTVQ 101 (401)
T ss_dssp CSCCCTTSCCCCCHHHHHHHHH--------HHHTTC-CCCCCCTT---CCHHHHHHHHHHHHCTTCHHHHTT--CEEEEE
T ss_pred eeEECCCCCEechHHHHHHHHH--------hccccc-ccCCCCCC---CCHHHHHHHHHHhcCCCccccccC--ceEEEe
Confidence 5799999999888777776422 221101 11232211 2457899999998754 55 4877
Q ss_pred eCCHHHHHHHHHhhCC--CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-CCCccCHHHHHHHHhhhhccCC
Q 002866 222 TVSRGSAFKLLAESYP--FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW-PTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 222 TsnATeALnLVaeslp--f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~-p~g~Id~edLe~~I~~~~rr~~ 298 (872)
|+|+|+|+++++..+. .++|++|++..- .|.... ..++..|+++..+|++. .++.++.+++++.+.+ .
T Consensus 102 t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p-~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~ 172 (401)
T 7aat_A 102 GISGTGSLRVGANFLQRFFKFSRDVYLPKP-SWGNHT---PIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISK-----I 172 (401)
T ss_dssp EEHHHHHHHHHHHHHHHHCTTCCEEEEEES-CCTTHH---HHHHHTTCEEEEEECEETTTTEECHHHHHHHHTT-----S
T ss_pred cCcchHHHHHHHHHHHHhccCCCEEEEcCC-CchhHH---HHHHHcCCeeEeeeeeccccCccCHHHHHHHHHh-----C
Confidence 9999999999877642 367999876532 233333 34566799999999853 2467899988888864 2
Q ss_pred CCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccc-cCCCCCc-----cCC--CCCCCCcEEEEcccccC
Q 002866 299 DSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGS-LGPKDMD-----SLG--LSLFRPDFIITSFYRVF 366 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ-~aG~~mi-----pLD--Ls~l~~DFlv~S~HK~f 366 (872)
.++++++.++..+|.||..++.+ +++.|+++|+++++|.+. ..+.... ++. .......+++.|++|.|
T Consensus 173 ~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 252 (401)
T 7aat_A 173 PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNM 252 (401)
T ss_dssp CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTS
T ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccc
Confidence 34689999999999999988864 345679999999999984 3332100 010 12235568999999999
Q ss_pred CCCCCc--eEEEEEe
Q 002866 367 GFDPTG--FGCLLIK 379 (872)
Q Consensus 367 G~~PtG--vG~LyVR 379 (872)
| +.| +|+|++.
T Consensus 253 ~--~~G~RiG~l~~~ 265 (401)
T 7aat_A 253 G--LYGERAGAFTVI 265 (401)
T ss_dssp C--CGGGCEEEEEEE
T ss_pred c--cccCceEEEEEE
Confidence 8 558 8999863
No 147
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.44 E-value=1.1e-12 Score=142.83 Aligned_cols=159 Identities=16% Similarity=0.083 Sum_probs=118.1
Q ss_pred HHHHHHHHH-HHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRI-MDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerI-A~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
.+.+.|+++ |+++|.. . .++||+|+|+|+++++.++.+++||+||+.. ..|.++.. .++..|++++.++++.
T Consensus 37 ~~~~l~~~~~a~~~g~~-~--~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~-~~~~~~~~---~~~~~G~~~~~v~~~~ 109 (377)
T 3ju7_A 37 INQRFEQTIMSGFFQNR-G--AVTTVANATLGLMAAIQLKKRKKGKYALMPS-FTFPATPL---AAIWCGLEPYFIDISI 109 (377)
T ss_dssp HHHHHHHHHHHHTSTTC-S--EEEEESCHHHHHHHHHHHHSCTTCCEEEEES-SSCTHHHH---HHHHTTCEEEEECBCT
T ss_pred HHHHHHHHHHHHHhCCC-C--eEEEeCCHHHHHHHHHHHcCCCCcCEEEECC-CCcHHHHH---HHHHcCCEEEEEecCC
Confidence 467899999 9999942 2 3899999999999999987778999988763 34555543 3456799999999986
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCC--
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLF-- 353 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l-- 353 (872)
.++.+++++|+++|...+ .+|++|. .+|.+|...|++. .+.|+ +|+.|++|++|+.|. ..+....
T Consensus 110 ~~~~~d~~~l~~~i~~~~-----~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~---~~~~~~~g~ 177 (377)
T 3ju7_A 110 DDWYMDKTVLWDKIEELK-----EEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGL---MNGGMHYGQ 177 (377)
T ss_dssp TTCSBCHHHHHHHHHHHG-----GGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTC---EETTEETTT
T ss_pred ccCCcCHHHHHHHHhcCC-----CCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCC---eECCEeccC
Confidence 667899999999883210 1378776 4578999999974 56789 999999999999875 2333223
Q ss_pred -CCcEEEEc--ccccCCCCCCceEEEEE
Q 002866 354 -RPDFIITS--FYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 354 -~~DFlv~S--~HK~fG~~PtGvG~LyV 378 (872)
..|+.++| .||+++. |.|.+++
T Consensus 178 ~~~d~~~~S~~~~K~l~~---g~gG~~~ 202 (377)
T 3ju7_A 178 DFSGMIIYSFHATKPFGI---GEGGLIY 202 (377)
T ss_dssp TCSSEEEEECBTTSSSCC---BSCEEEE
T ss_pred CCCcEEEEECCCCCcCCC---CCcEEEE
Confidence 24666665 5799984 4444444
No 148
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.43 E-value=2.4e-13 Score=147.94 Aligned_cols=175 Identities=10% Similarity=0.105 Sum_probs=130.5
Q ss_pred HHHHHHHHHHhc-----CCCCCCCc---EEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHH-cCcEE
Q 002866 199 EHDIKTRIMDHL-----NIPENEYG---LVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKE-KGAKV 269 (872)
Q Consensus 199 ieeARerIA~lL-----gA~~dEY~---VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~Akr-kGaeV 269 (872)
..+.|++||+++ +++++ . |+||+|+|+|+++++.++ +++||+|++..- .|.. +...++. .|+++
T Consensus 90 ~~~lr~~ia~~~~~~~~~~~~~--~~~~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~p-~y~~---~~~~~~~~~g~~~ 162 (430)
T 2x5f_A 90 IEELRDLWQQKMLRDNPELSID--NMSRPIVTNALTHGLSLVGDLF-VNQDDTILLPEH-NWGN---YKLVFNTRNGANL 162 (430)
T ss_dssp CHHHHHHHHHHHHHHCTTCCGG--GBCCCEEESHHHHHHHHHHHHH-CCTTCEEEEESS-CCTH---HHHHHTTTTCCEE
T ss_pred CHHHHHHHHHHHhccCcccCCC--ccceEEEcCCchHHHHHHHHHH-hCCCCEEEEcCC-cCcc---HHHHHHHhcCCeE
Confidence 357999999999 88765 5 999999999999999987 478999887632 2332 3345566 79999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc---HH-HHHHHHH-----CCcEEEeecccc
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQ-----NHWHVLLDAGSL 340 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are-----~G~~VLVDAAQ~ 340 (872)
..+|++..+..++.++|+++|... ..+++++++++.+|.||.++| ++ +++.|++ +|+++++|.++.
T Consensus 163 ~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~ 237 (430)
T 2x5f_A 163 QTYPIFDKDGHYTTDSLVEALQSY-----NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYY 237 (430)
T ss_dssp EEECCBCTTSCBCSHHHHHHHHHC-----CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTT
T ss_pred EEEeccCccCCcCHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcc
Confidence 999987633568999999998642 125889999999999999999 44 4467789 999999999976
Q ss_pred CC----CCCccC--CCCC-CCC---cEEEEcccccCCCCCCc--eEEEEE---eCCCccccc
Q 002866 341 GP----KDMDSL--GLSL-FRP---DFIITSFYRVFGFDPTG--FGCLLI---KKSVMGSLQ 387 (872)
Q Consensus 341 aG----~~mipL--DLs~-l~~---DFlv~S~HK~fG~~PtG--vG~LyV---Rk~~i~~L~ 387 (872)
.. ....++ ++.. .+. ++++.|++|+||. .| +|++++ ++++++.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~--~G~riG~~~~~~~~~~~~~~l~ 297 (430)
T 2x5f_A 238 GLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFA--WGFRVGFMTFGTSDQTTKEVLE 297 (430)
T ss_dssp TCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTC--GGGCCEEEEEBCCCHHHHHHHH
T ss_pred cccCCcccchHHHHHHhhccCCcceEEEEEecccCCCC--CCCCeEEEEEecCCHHHHHHHH
Confidence 42 100121 3322 344 6889999999984 47 699999 766665553
No 149
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.43 E-value=2.7e-13 Score=144.07 Aligned_cols=172 Identities=14% Similarity=0.163 Sum_probs=129.4
Q ss_pred HHHHHHHHHhc-CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC-
Q 002866 200 HDIKTRIMDHL-NIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP- 277 (872)
Q Consensus 200 eeARerIA~lL-gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p- 277 (872)
.+.|++||+++ +++++ .|+||+|+|+|+.+++.++ .++||+|++..- .|.+. ...++..|+++..+|++..
T Consensus 66 ~~l~~~la~~~~~~~~~--~v~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~-~~~~~---~~~~~~~g~~~~~v~~~~~~ 138 (375)
T 3op7_A 66 PAFKKSVSQLYTGVKPE--QILQTNGATGANLLVLYSL-IEPGDHVISLYP-TYQQL---YDIPKSLGAEVDLWQIEEEN 138 (375)
T ss_dssp HHHHHHHHTTSSSCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEES-SCTHH---HHHHHHTTCEEEEEEEEGGG
T ss_pred HHHHHHHHHHhccCChh--hEEEcCChHHHHHHHHHHh-cCCCCEEEEeCC-CchhH---HHHHHHcCCEEEEEeccccC
Confidence 57999999998 46665 5999999999999999887 578999876532 23333 3445678999999998743
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccCCCCC-ccCCCCC
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLGPKDM-DSLGLSL 352 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~aG~~m-ipLDLs~ 352 (872)
+..++.++|++++.. ++++|.++..+|.||.++| ++ +++.|+++|+++++|.++...... .+.-...
T Consensus 139 ~~~~d~~~l~~~l~~--------~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~ 210 (375)
T 3op7_A 139 GWLPDLEKLRQLIRP--------TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEV 210 (375)
T ss_dssp TTEECHHHHHHHCCT--------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHH
T ss_pred CCCCCHHHHHHhhcc--------CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhh
Confidence 334789999888752 5889999999999999999 65 456789999999999997653210 0111122
Q ss_pred CCCcEEEEcccccCCCCCCc--eEEEEEeCCCcccccC
Q 002866 353 FRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQN 388 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~P 388 (872)
.+.++++.|++|.||. .| +|++++++++++.+..
T Consensus 211 ~~~~i~~~s~sK~~~~--~G~r~G~v~~~~~l~~~~~~ 246 (375)
T 3op7_A 211 YDKGIAVNSLSKTYSL--PGIRIGWVAANHQVTDILRD 246 (375)
T ss_dssp CTTEEEEEESSSSSSC--GGGCCEEEECCHHHHHHHTT
T ss_pred cCCEEEEeEChhhcCC--cccceEEEEeCHHHHHHHHH
Confidence 4567899999999983 35 5999988877777654
No 150
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.43 E-value=7.6e-13 Score=142.84 Aligned_cols=211 Identities=12% Similarity=0.066 Sum_probs=142.0
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC------CCCCCCcEEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN------IPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg------A~~dEY~VVF 221 (872)
+.+.|..+...+ .|+.+++++.+ .+.... ....|+.+. ...+.|++|+++++ ++++ ..|+|
T Consensus 29 ~~i~l~~g~~~~~~~~~v~~a~~~-------~~~~~~-~~~~y~~~~---g~~~lr~~la~~~~~~~g~~~~~~-~~i~~ 96 (422)
T 3fvs_A 29 DVVNLGQGFPDFPPPDFAVEAFQH-------AVSGDF-MLNQYTKTF---GYPPLTKILASFFGELLGQEIDPL-RNVLV 96 (422)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHH-------HHHSCG-GGGSCCCTT---CCHHHHHHHHHHHHHHHTCCCCHH-HHEEE
T ss_pred CceEeCCCCCCCCCCHHHHHHHHH-------HHhCCC-ccCCCCCCC---CCHHHHHHHHHHHHHhhCCCCCCC-CcEEE
Confidence 478888777553 56677776432 111100 001344332 12356777777766 5541 25999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-----------CCCccCHHHHHHHH
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW-----------PTLKLCSTDLRKQI 290 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~-----------p~g~Id~edLe~~I 290 (872)
|+|+|+|+++++.++ .++|++|++..- .|... ...++..|+++..+|++. .+..++.++|++++
T Consensus 97 ~~g~~~a~~~~~~~~-~~~gd~vl~~~p-~~~~~---~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~ 171 (422)
T 3fvs_A 97 TVGGYGALFTAFQAL-VDEGDEVIIIEP-FFDCY---EPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKF 171 (422)
T ss_dssp ESHHHHHHHHHHHHH-CCTTCEEEEEES-CCTTH---HHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTC
T ss_pred ECChHHHHHHHHHHH-cCCCCEEEEcCC-Cchhh---HHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhc
Confidence 999999999999987 578998876532 23333 344566899999999875 12357888887766
Q ss_pred hhhhccCCCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccC----CCCCccCCCCCC----CCcEE
Q 002866 291 SSKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLG----PKDMDSLGLSLF----RPDFI 358 (872)
Q Consensus 291 ~~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~a----G~~mipLDLs~l----~~DFl 358 (872)
. +++++|.++..+|.||.++| ++ +++.|+++|+++++|.++.. ++ .+.++..+ +.+++
T Consensus 172 ~--------~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~i~ 241 (422)
T 3fvs_A 172 T--------SRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGH--QHISIASLPGMWERTLT 241 (422)
T ss_dssp C--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSTTTGGGEEE
T ss_pred C--------CCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC--CCCChhhcccccCcEEE
Confidence 4 25899999999999999996 54 34678999999999999864 32 23333333 45599
Q ss_pred EEcccccCCCCCCceEEEEEeCCCcccc
Q 002866 359 ITSFYRVFGFDPTGFGCLLIKKSVMGSL 386 (872)
Q Consensus 359 v~S~HK~fG~~PtGvG~LyVRk~~i~~L 386 (872)
+.|++|.||.+-.++|+++++++.++.+
T Consensus 242 ~~S~sK~~g~~G~r~G~~~~~~~~~~~~ 269 (422)
T 3fvs_A 242 IGSAGKTFSATGWKVGWVLGPDHIMKHL 269 (422)
T ss_dssp EEEHHHHHTCGGGCCEEEECCHHHHHHH
T ss_pred EecchhccCCccceEEEEEeCHHHHHHH
Confidence 9999999983112389998877766554
No 151
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.43 E-value=1.2e-12 Score=140.00 Aligned_cols=208 Identities=14% Similarity=0.056 Sum_probs=140.4
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCC------CCCCCcEEEeC
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNI------PENEYGLVFTV 223 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA------~~dEY~VVFTs 223 (872)
-+|+|+.+.+|.++.+++++.+ ....... ...|+.+. ...+.|+.|+++++. +++...|+||+
T Consensus 34 g~y~d~~~~~~~~~~v~~a~~~-------~~~~~~~-~~~y~~~~---g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~ 102 (397)
T 3fsl_A 34 GLYYNEDGIIPQLQAVAEAEAR-------LNAQPHG-ASLYLPME---GLNCYRHAIAPLLFGADHPVLKQQRVATIQTL 102 (397)
T ss_dssp CCCCCTTSCCCCCHHHHHHHHH-------HHHSCCC-CCCCCCTT---CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEES
T ss_pred eEEECCCCCccCcHHHHHHHHh-------hccCccc-cccCCCCC---chHHHHHHHHHHHhcCCcccccccceEEEEcC
Confidence 4688988999988888887421 0111100 11233221 235789999999865 34411599999
Q ss_pred CHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc-CCCCccCHHHHHHHHhhhhccCCCCC
Q 002866 224 SRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK-WPTLKLCSTDLRKQISSKKRRKKDSA 301 (872)
Q Consensus 224 nATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd-~p~g~Id~edLe~~I~~~~rr~~~~~ 301 (872)
|+|+|+++++..+. +++|++|++..- .|. .+...++..|+++..+|+. ..++.++.++|++.+... .++
T Consensus 103 g~~~a~~~~~~~~~~~~~gd~vl~~~p-~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~ 173 (397)
T 3fsl_A 103 GGSGALKVGADFLKRYFPESGVWVSDP-TWE---NHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTL-----QAG 173 (397)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEESS-CCH---HHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTC-----CTT
T ss_pred CcHHHHHHHHHHHHhcCCCCeEEEeCC-Cch---hHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhC-----CCC
Confidence 99999999854321 467899887632 233 3345567789999999982 224678999999998642 246
Q ss_pred ceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCCCC-----cc-CCC-CCCCCcEEEEcccccCCCCC
Q 002866 302 AGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPKDM-----DS-LGL-SLFRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 302 T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~~m-----ip-LDL-s~l~~DFlv~S~HK~fG~~P 370 (872)
++++.++..+|.||.++|.+ +++.|+++|+++++|.+......- .+ ..+ ...+..+++.|+.|.|| +
T Consensus 174 ~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~--~ 251 (397)
T 3fsl_A 174 SIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFS--L 251 (397)
T ss_dssp CEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT--C
T ss_pred CEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEeccccccc--C
Confidence 89999999999999998875 345678999999999996432100 00 001 12355688999999998 5
Q ss_pred Cc--eEEEEEe
Q 002866 371 TG--FGCLLIK 379 (872)
Q Consensus 371 tG--vG~LyVR 379 (872)
.| +|++++.
T Consensus 252 ~G~riG~~~~~ 262 (397)
T 3fsl_A 252 YGERVGGLSVM 262 (397)
T ss_dssp GGGCCEEEEEE
T ss_pred cCCCeeEEEEe
Confidence 57 7887753
No 152
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.43 E-value=3.1e-13 Score=144.94 Aligned_cols=172 Identities=10% Similarity=0.054 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHH-HHHHcCcEEEEEec
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQ-SAKEKGAKVYSAWF 274 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~-~AkrkGaeV~~Vpv 274 (872)
...+.+|+.+++++|++++ .|+||+| |+|+.+++.++ +++|+.|++.. ..|.++. .... .....++.+..+++
T Consensus 76 ~~~~~~~~~la~~~~~~~~--~v~~~sG-s~a~~~a~~~~-~~~gd~v~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~ 150 (420)
T 3gbx_A 76 VVEQLAIDRAKELFGADYA--NVQPHSG-SQANFAVYTAL-LQPGDTVLGMN-LAQGGHLTHGSPVNFSGKLYNIVPYGI 150 (420)
T ss_dssp HHHHHHHHHHHHHHTCSEE--ECCCSSH-HHHHHHHHHHH-CCTTCEEEEEE-EC------------CHHHHSEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCc--eeEecCc-HHHHHHHHHHh-cCCCCEEEecc-hhhcceeccchhhhhcccceeEEeccC
Confidence 4566789999999999754 2555555 88999888776 57899987653 2344422 1111 11223455556666
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCC---CCccCCC
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPK---DMDSLGL 350 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~---~mipLDL 350 (872)
+ .++.++.++|+++|... ++++|.+...+| |...|++. .+.|+++|+++++|.+|+.|. ...+..+
T Consensus 151 ~-~~~~~d~~~l~~~i~~~-------~~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~ 220 (420)
T 3gbx_A 151 D-ESGKIDYDEMAKLAKEH-------KPKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPV 220 (420)
T ss_dssp C-TTCSCCHHHHHHHHHHH-------CCSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCST
T ss_pred C-ccCCcCHHHHHHHHHhc-------CCeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCccc
Confidence 6 35678999999999752 377888865443 67899974 567899999999999986442 0012233
Q ss_pred CCCCCcEEEEcccccCCCCCCceEEEEEeC---CCccccc
Q 002866 351 SLFRPDFIITSFYRVFGFDPTGFGCLLIKK---SVMGSLQ 387 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk---~~i~~L~ 387 (872)
. .+|++++|+||+|++ |.| |+++.++ .....+.
T Consensus 221 ~--~~di~~~s~sK~~~g-~~g-g~~~~~~~~~~~~~~~~ 256 (420)
T 3gbx_A 221 P--HAHVVTTTTHKTLAG-PRG-GLILAKGGDEELYKKLN 256 (420)
T ss_dssp T--TSSEEEEESSGGGCS-CSC-EEEEESSCCHHHHHHHH
T ss_pred c--cCCEEEeecccCCCC-CCc-eEEEEcCCcHHHHHHhh
Confidence 3 389999999999966 787 8888887 4444443
No 153
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.42 E-value=1.2e-12 Score=146.24 Aligned_cols=158 Identities=12% Similarity=0.021 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHH-HHHHHHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNW-MAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~-~~~~AkrkGaeV~~Vpvd~ 276 (872)
..++.+++||+++|++. .++++++++|+.+++.++ .++||+|++... .|.+... +...++..|++++.++.+
T Consensus 83 ~~~~le~~lA~l~g~~~----~v~~~sG~~Ai~~al~al-~~~Gd~Vi~~~~-~y~~~~~~~~~~~~~~G~~~~~v~~~- 155 (430)
T 3ri6_A 83 TVEDLEQRLKNLTGALG----VLALGSGMAAISTAILTL-ARAGDSVVTTDR-LFGHTLSLFQKTLPSFGIEVRFVDVM- 155 (430)
T ss_dssp HHHHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHH-CCTTCEEEEETT-CCHHHHHHHHTHHHHTTCEEEEECTT-
T ss_pred HHHHHHHHHHHHHCCCc----EEEECCHHHHHHHHHHHH-hCCCCEEEEcCC-CchhHHHHHHHHHHHcCCEEEEeCCC-
Confidence 45789999999999842 566667789999988877 678999887643 3444443 333677889999998764
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
+.++|+++|.. +|++|.+...+|.+|.+.|++. .+.|+++|+++++|.+++.|. ..+...+++
T Consensus 156 -----d~~~l~~ai~~--------~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~---~~~~~~~g~ 219 (430)
T 3ri6_A 156 -----DSLAVEHACDE--------TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPY---LLEAKRLGV 219 (430)
T ss_dssp -----CHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTT---TCCGGGGTC
T ss_pred -----CHHHHHHhhCC--------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccc---cCChHHcCC
Confidence 57888877742 5899999999999999999984 567899999999999998875 245556789
Q ss_pred cEEEEcccccCCCCC-CceEEEEEe
Q 002866 356 DFIITSFYRVFGFDP-TGFGCLLIK 379 (872)
Q Consensus 356 DFlv~S~HK~fG~~P-tGvG~LyVR 379 (872)
|+++.|++|++|+ | .++|.+++.
T Consensus 220 div~~S~sK~l~g-~g~~~gG~vv~ 243 (430)
T 3ri6_A 220 DIEVLSSTKFISG-GGTSVGGVLID 243 (430)
T ss_dssp SEEEEECCCEEET-TEEECCEEEEE
T ss_pred EEEEECCcccccC-CCCceEEEEEE
Confidence 9999999999985 3 236666653
No 154
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.42 E-value=2.4e-13 Score=145.36 Aligned_cols=204 Identities=14% Similarity=0.090 Sum_probs=138.0
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc-CC--CCCCCcEEE--eCC
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL-NI--PENEYGLVF--TVS 224 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL-gA--~~dEY~VVF--Tsn 224 (872)
-.|+|..+..+.++.+.+++.+ ..... ....|+.+. ...+.|++||+++ +. +++ .|+| |+|
T Consensus 34 g~~~~~~~~~~~~~~v~~a~~~--------~~~~~-~~~~y~~~~---g~~~lr~~la~~~~~~~~~~~--~v~~~~~~g 99 (394)
T 2ay1_A 34 GVYKDATGHTPIMRAVHAAEQR--------MLETE-TTKTYAGLS---GEPEFQKAMGELILGDGLKSE--TTATLATVG 99 (394)
T ss_dssp CSCCCTTSCCCCCHHHHHHHHH--------HHHHC-CCCCCCCSS---CCHHHHHHHHHHHHGGGCCGG--GEEEEEEEH
T ss_pred ceeeCCCCCccCcHHHHHHHHH--------hcCCc-ccCCCCCCC---CcHHHHHHHHHHHhCCCCCcc--cEEEEecCC
Confidence 3466666666777788776432 11111 111243221 2357999999997 55 454 5999 999
Q ss_pred HHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-CCCccCHHHHHHHHhhhhccCCCCCc
Q 002866 225 RGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW-PTLKLCSTDLRKQISSKKRRKKDSAA 302 (872)
Q Consensus 225 ATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~-p~g~Id~edLe~~I~~~~rr~~~~~T 302 (872)
+|+|+.+++..+. +.+|++|++..- .|. .+...++..|+++..+|.+. .+..++.++|++++... .+++
T Consensus 100 ~~~a~~~~~~~~~~~~~gd~vl~~~p-~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~ 170 (394)
T 2ay1_A 100 GTGALRQALELARMANPDLRVFVSDP-TWP---NHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAA-----KKGD 170 (394)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEES-CCH---HHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTC-----CTTC
T ss_pred chhHHHHHHHHHHhcCCCCEEEEcCC-CCh---hHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhC-----CCCC
Confidence 9999999887653 347888876532 233 33445566799999999852 24568999999988642 2347
Q ss_pred eEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccccCCCC-----CccCC-CCCCCC-cEEEEcccccCCCCCC
Q 002866 303 GLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSLGPKD-----MDSLG-LSLFRP-DFIITSFYRVFGFDPT 371 (872)
Q Consensus 303 ~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~aG~~-----mipLD-Ls~l~~-DFlv~S~HK~fG~~Pt 371 (872)
.++++++.+|.||.++|.+. ++.|+++|+++++|.++..... ..++. +...+. .+++.|++|+|| +.
T Consensus 171 ~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~--~~ 248 (394)
T 2ay1_A 171 MVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFG--IY 248 (394)
T ss_dssp EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTT--CG
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCc--Cc
Confidence 88999999999999999752 4567899999999999864320 01222 222233 477889999998 45
Q ss_pred c--eEEEEE
Q 002866 372 G--FGCLLI 378 (872)
Q Consensus 372 G--vG~LyV 378 (872)
| +|++++
T Consensus 249 G~riG~~~~ 257 (394)
T 2ay1_A 249 RERTGCLLA 257 (394)
T ss_dssp GGCEEEEEE
T ss_pred CCccceEEE
Confidence 7 599998
No 155
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.42 E-value=5.1e-13 Score=145.68 Aligned_cols=179 Identities=13% Similarity=0.107 Sum_probs=128.0
Q ss_pred HHHHHHHHHHhc----C---CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEE
Q 002866 199 EHDIKTRIMDHL----N---IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYS 271 (872)
Q Consensus 199 ieeARerIA~lL----g---A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~ 271 (872)
..+.|+.||+++ | ++++ .|+||+|+|+|+.+++.++ .++|++|++..- .|. .+...++..|+++..
T Consensus 87 ~~~lr~~la~~l~~~~g~~~~~~~--~v~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p-~y~---~~~~~~~~~g~~~~~ 159 (425)
T 1vp4_A 87 DPVLKQQILKLLERMYGITGLDED--NLIFTVGSQQALDLIGKLF-LDDESYCVLDDP-AYL---GAINAFRQYLANFVV 159 (425)
T ss_dssp CHHHHHHHHHHHHHHHCCCSCCGG--GEEEEEHHHHHHHHHHHHH-CCTTCEEEEEES-CCH---HHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHHHHHhccCCCCCCcc--cEEEeccHHHHHHHHHHHh-CCCCCEEEEeCC-CcH---HHHHHHHHcCCEEEE
Confidence 357888999988 9 4454 6999999999999999987 468899876532 233 334456668999999
Q ss_pred EeccCCCCccCHHHHHHHHhhhhccCCCCCceEE-EEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCC--C
Q 002866 272 AWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLF-VFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPK--D 344 (872)
Q Consensus 272 Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LV-a~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~--~ 344 (872)
+|++. ++ ++.++|+++|..........++++| +++..+|.||.++|.+ +++.|+++|+++++|.++.... .
T Consensus 160 v~~~~-~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g 237 (425)
T 1vp4_A 160 VPLED-DG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEG 237 (425)
T ss_dssp EEEET-TE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSS
T ss_pred eccCC-CC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC
Confidence 99876 33 8999999988641100001147787 6899999999999974 3466789999999999986521 0
Q ss_pred CccCCCC---CCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 345 MDSLGLS---LFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 345 mipLDLs---~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.....+. ..+.++++.|++|+||+ -..+|++++++++++.+.
T Consensus 238 ~~~~~~~~~~~~~~~i~~~s~sK~~~~-G~r~G~~~~~~~~~~~l~ 282 (425)
T 1vp4_A 238 ETVDPIFKIGGPERVVLLNTFSKVLAP-GLRIGMVAGSKEFIRKIV 282 (425)
T ss_dssp CCCCCHHHHHCTTTEEEEEESTTTTCG-GGCEEEEECCHHHHHHHH
T ss_pred CCCcCHHHhCCCCCEEEEecccccccc-ccceEEEeeCHHHHHHHH
Confidence 0122332 23567999999999983 122799999877665553
No 156
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.41 E-value=7.7e-13 Score=141.31 Aligned_cols=204 Identities=14% Similarity=0.074 Sum_probs=139.4
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC------CCCCCCcEEE--
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN------IPENEYGLVF-- 221 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg------A~~dEY~VVF-- 221 (872)
-.|+|..+..+.++.+.+++.+ ...... ...|+.+ ....+.|++||++++ ++++ .|+|
T Consensus 34 g~~~~~~~~~~~~~~v~~a~~~--------~~~~~~-~~~y~~~---~g~~~lr~~la~~~~~~~~~~~~~~--~v~~~~ 99 (396)
T 2q7w_A 34 GVYKDETGKTPVLTSVKKAEQY--------LLENET-TKNYLGI---DGIPEFGRCTQELLFGKGSALINDK--RARTAQ 99 (396)
T ss_dssp CSCCCTTSCCCCCHHHHHHHHH--------HHHHCC-CCCCCCT---TCCHHHHHHHHHHHHCTTCHHHHTT--CEEEEE
T ss_pred ccccCCCCCccCcHHHHHHHHh--------hcCccc-ccCCCCC---CCCHHHHHHHHHHHhcCCCCccccc--cEEEEe
Confidence 4678887777888888877432 111111 1124322 124579999999983 2354 4888
Q ss_pred eCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC-CCCccCHHHHHHHHhhhhccCCC
Q 002866 222 TVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW-PTLKLCSTDLRKQISSKKRRKKD 299 (872)
Q Consensus 222 TsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~-p~g~Id~edLe~~I~~~~rr~~~ 299 (872)
|+|+|+|+.+++..+. +.+|++|++..- .|. .+...++..|+++..+|.+. ++..++.++|++++... .
T Consensus 100 ~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p-~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~ 170 (396)
T 2q7w_A 100 TPGGTGALRVAADFLAKNTSVKRVWVSNP-SWP---NHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEA-----Q 170 (396)
T ss_dssp ESHHHHHHHHHHHHHHHHSCCCEEEEEES-CCT---HHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTC-----C
T ss_pred cccchhhHHHHHHHHHHhCCCCEEEEcCC-Cch---hHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhC-----C
Confidence 9999999999887653 458999876532 222 23445666899999999842 24668999999988631 2
Q ss_pred CCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCC-C----CccCC-CCCC-CCcEEEEcccccCCC
Q 002866 300 SAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPK-D----MDSLG-LSLF-RPDFIITSFYRVFGF 368 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~-~----mipLD-Ls~l-~~DFlv~S~HK~fG~ 368 (872)
+++++++++..+|.||.++|.+ +++.|+++|+++++|.++.... + ..++. +... ..++++.|++|.||
T Consensus 171 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~- 249 (396)
T 2q7w_A 171 AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFG- 249 (396)
T ss_dssp TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTT-
T ss_pred CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccccc-
Confidence 3578999999999999999975 3456789999999999965421 0 01121 2111 34688999999998
Q ss_pred CCCc--eEEEEE
Q 002866 369 DPTG--FGCLLI 378 (872)
Q Consensus 369 ~PtG--vG~LyV 378 (872)
+.| +|++++
T Consensus 250 -~~G~riG~~~~ 260 (396)
T 2q7w_A 250 -LYNERVGACTL 260 (396)
T ss_dssp -CGGGCCEEEEE
T ss_pred -ccccccceEEE
Confidence 558 699987
No 157
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.41 E-value=1.8e-12 Score=154.49 Aligned_cols=175 Identities=11% Similarity=0.054 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.++|+.+++++|++. .++||+|+|+|++.++.++ .++||+||+.. ..|.++... +...|+++++++.+.
T Consensus 205 g~v~~~ee~la~l~G~d~---~i~~~~Gtt~a~~~~i~al-~~~GD~Vlv~~-~~h~s~~~~---~~~~G~~~v~v~~~~ 276 (755)
T 2vyc_A 205 GAFGESEKYAARVFGADR---SWSVVVGTSGSNRTIMQAC-MTDNDVVVVDR-NCHKSIEQG---LMLTGAKPVYMVPSR 276 (755)
T ss_dssp HHHHHHHHHHHHHHTCSE---EEEESSHHHHHHHHHHHHH-CCTTCEEEEES-SCCHHHHHH---HHHHCCEEEEECCCB
T ss_pred cHHHHHHHHHHHHhCCCc---eEEECCcHHHHHHHHHHHh-cCCCCEEEECC-CchHHHHHH---HHHcCCEEEEEeCCC
Confidence 567889999999999963 4788888899999999887 47899988764 467777544 344699999998764
Q ss_pred CC----Ccc-----CHHHHHHHHhhhh--ccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCC
Q 002866 277 PT----LKL-----CSTDLRKQISSKK--RRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKD 344 (872)
Q Consensus 277 p~----g~I-----d~edLe~~I~~~~--rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~ 344 (872)
+. +.+ +.++|+++|.... +++...+++++++++ .|.+|.++|++ +++.|+++|+++++|+||.++..
T Consensus 277 ~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~-pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~ 355 (755)
T 2vyc_A 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTN-CTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYAR 355 (755)
T ss_dssp CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEES-SCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGG
T ss_pred CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEEC-CCCCceecCHHHHHHHHHHcCCEEEEECcCchhcc
Confidence 21 235 8999999997521 111222346888887 47899999998 45688999999999999865310
Q ss_pred CccC--CCCC-CC--CcE------EEEcccccCCCCCCceEEEEEeCC
Q 002866 345 MDSL--GLSL-FR--PDF------IITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 345 mipL--DLs~-l~--~DF------lv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
..+. +.+. .+ +|+ +++|+||++++ |.|.|+++++++
T Consensus 356 ~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g-~~~g~~i~~~~~ 402 (755)
T 2vyc_A 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREG 402 (755)
T ss_dssp GCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSC-CTTCEEEEEECC
T ss_pred cCcccCCcchhcCCcCCccCCCeEEEECccccccC-cCCeeeeeecCc
Confidence 0011 1222 34 687 99999999988 899999999876
No 158
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.41 E-value=2.8e-12 Score=135.25 Aligned_cols=200 Identities=12% Similarity=0.061 Sum_probs=135.5
Q ss_pred CceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
.++.|..+... +.++.+++++.+ .+.....|.++.. .+.|++||+++|++++ .|+||+|+|+
T Consensus 16 ~~id~~~~~~~~~~~~~v~~a~~~-----------~~~~~~~y~~~~~----~~lr~~la~~~~~~~~--~i~~t~g~~~ 78 (350)
T 3fkd_A 16 EIVNFSTTVWTDGDKDHLEKHLVE-----------NLNCIRHYPEPDA----GTLRQMLAKRNSVDNN--AILVTNGPTA 78 (350)
T ss_dssp CCEECSCCSCCCSCCHHHHHHHHH-----------TGGGGGSCCCTTC----HHHHHHHHHHTTCCGG--GEEEESHHHH
T ss_pred cEEEccCCCCCCCCCHHHHHHHHH-----------hHhHHhcCCCCcH----HHHHHHHHHHhCcCHH--HEEEcCCHHH
Confidence 35666655333 346677776432 1111123443321 5799999999999876 5999999999
Q ss_pred HHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec-cCCCCccCHHHHHHHHhhhhccCCCCCceEEE
Q 002866 228 AFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF-KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFV 306 (872)
Q Consensus 228 ALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv-d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa 306 (872)
|+++++..+. |++|++.. ..+. .+...++..|++++.+|+ +.. ..++. +++++|.
T Consensus 79 al~~~~~~l~---gd~Vi~~~-p~~~---~~~~~~~~~g~~~~~v~~~~~~-~~~~~----------------~~~~~v~ 134 (350)
T 3fkd_A 79 AFYQIAQAFR---GSRSLIAI-PSFA---EYEDACRMYEHEVCFYPSNEDI-GEADF----------------SNMDFCW 134 (350)
T ss_dssp HHHHHHHHTT---TCEEEEEE-SCCH---HHHHHHHHTTCEEEEEETTSCG-GGSCC----------------TTCSEEE
T ss_pred HHHHHHHHHC---CCEEEEeC-CCcH---HHHHHHHHcCCeEEEEecCCcc-ccCcc----------------CCCCEEE
Confidence 9999999986 89987653 2233 344556778999999998 542 22222 2588999
Q ss_pred EeCccCcccchhcHHHH-HHHHHCC-cEEEeeccccCCCC---CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 307 FPVQSRVTGAKYSYQWM-ALAQQNH-WHVLLDAGSLGPKD---MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 307 ~p~vSNvTG~i~PLe~I-~~Are~G-~~VLVDAAQ~aG~~---mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
+++.+|.||.++|++.+ +.++..+ .++++|.++..... .....+...+.++++.|++|+||.+..++|+++++++
T Consensus 135 i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~ 214 (350)
T 3fkd_A 135 LCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKD 214 (350)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHH
T ss_pred EeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHH
Confidence 99999999999999854 4555544 69999999752210 0112233456679999999999831245899999887
Q ss_pred CcccccCC
Q 002866 382 VMGSLQNQ 389 (872)
Q Consensus 382 ~i~~L~P~ 389 (872)
+++.+...
T Consensus 215 ~~~~~~~~ 222 (350)
T 3fkd_A 215 FMKRVAAF 222 (350)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 77777643
No 159
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.41 E-value=3.4e-13 Score=150.51 Aligned_cols=178 Identities=12% Similarity=0.009 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHH-------HHHHHcCcEE
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMA-------QSAKEKGAKV 269 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~-------~~AkrkGaeV 269 (872)
...+++++.+++++|++.....|+|| ++|+|+.+++.++ +++||+|++.....|.+...+. ..++..|+++
T Consensus 65 ~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al-~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~ 142 (431)
T 3ht4_A 65 IGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGI-LRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGY 142 (431)
T ss_dssp HHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTT-CCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEE
T ss_pred hhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHh-CCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEE
Confidence 34678999999999997542223366 6799999999887 5789999877423455554433 3345679999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeC----ccCcccchhcHH-HHHHHHH--CCcEEEeeccccCC
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPV----QSRVTGAKYSYQ-WMALAQQ--NHWHVLLDAGSLGP 342 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~----vSNvTG~i~PLe-~I~~Are--~G~~VLVDAAQ~aG 342 (872)
+.++.++ ++.++.++|+++|.. +|++|.+.. .++.+|.+.|++ +++.|++ +|+++++|.++..+
T Consensus 143 ~~v~~~~-~~~~d~e~l~~~l~~--------~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~ 213 (431)
T 3ht4_A 143 NAVPLTE-GGLVDFEAVAAAIHS--------NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEF 213 (431)
T ss_dssp EECCBCT-TSSBCHHHHHHHCCT--------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTT
T ss_pred EEeCCCC-CCCcCHHHHHhhcCC--------CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhh
Confidence 9999976 478999999988853 589999997 667777788886 4567899 99999999998776
Q ss_pred CCCccCCCCCCCCcEEEEcccccCCC--CCCceEEEEEeCCCcccccC
Q 002866 343 KDMDSLGLSLFRPDFIITSFYRVFGF--DPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 343 ~~mipLDLs~l~~DFlv~S~HK~fG~--~PtGvG~LyVRk~~i~~L~P 388 (872)
. ...+...+++|+++.|++|++|+ .|.| |+++.++++++.+..
T Consensus 214 ~--~~~~~~~~g~Di~~~S~sK~lgg~~~~~G-G~v~~~~~li~~l~~ 258 (431)
T 3ht4_A 214 I--EEQEPCHVGADLMAGSLIKNPGGGIVKTG-GYIVGKEQYVEACAY 258 (431)
T ss_dssp S--SSCCGGGTTCSEEEEETTSGGGTTTCSSC-EEEEECHHHHHHHHH
T ss_pred c--cCCCccccCCeEEEcCccccCCCCCCCce-EEEEecHHHHHHHHH
Confidence 4 22334456899999999998542 1677 999999887776654
No 160
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.40 E-value=2.9e-12 Score=138.34 Aligned_cols=202 Identities=13% Similarity=0.099 Sum_probs=133.4
Q ss_pred CceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhcc---CcCcCCCchHHHHHHHHHHHHHh--cC-CCCCCCcEEE
Q 002866 149 PKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSN---HALYGGAEKGTVEHDIKTRIMDH--LN-IPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~---~~~ygNpsS~~~ieeARerIA~l--Lg-A~~dEY~VVF 221 (872)
.+++|+.+... +.++.+++++.+ .+. .+.. ...|+.. ....+.|++||++ .| ++++ .|+|
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~~-~~~~~~~~~~y~~~---~g~~~lr~~la~~l~~g~~~~~--~v~~ 100 (400)
T 3asa_A 34 TVINLSIGDTTQPLNASVAEAFAS-------SIA-RLSSPTTCRGYGPD---FGLPALRQKLSEDFYRGFVDAK--EIFI 100 (400)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHH-------HHH-HHTSSSCCCCCCCT---TCCHHHHHHHHHTTSTTSSCGG--GEEE
T ss_pred ceEeccCCCCCCCCCHHHHHHHHH-------HHh-cccccccccCCCCC---CCCHHHHHHHHHHHHcCCCCHH--HEEE
Confidence 48999998775 456777776533 121 1110 0123221 2245799999999 47 6655 5999
Q ss_pred eCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE-EEEEeccCCCCccCHHHHHHHHhhhhccCCCC
Q 002866 222 TVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK-VYSAWFKWPTLKLCSTDLRKQISSKKRRKKDS 300 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae-V~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~ 300 (872)
|+|+|+|+.++...+ .+|++|++..- .+. .+...++..|++ +..+|++.. +.+..+ +++ .+
T Consensus 101 ~~G~~~al~~~~~~~--~~gd~Vl~~~p-~y~---~~~~~~~~~g~~~~~~~~~~~~-~~~~~~-l~~----------~~ 162 (400)
T 3asa_A 101 SDGAKVDLFRLLSFF--GPNQTVAIQDP-SYP---AYLDIARLTGAKEIIALPCLQE-NAFFPE-FPE----------DT 162 (400)
T ss_dssp ESCHHHHHHHHHHHH--CSSCEEEEEES-CCH---HHHHHHHHTTCSEEEEEECCGG-GTTCCC-CCT----------TC
T ss_pred ccChHHHHHHHHHHc--CCCCEEEECCC-CcH---HHHHHHHHcCCcceEecccchh-cCcccC-hhh----------cc
Confidence 999999999987654 57899876532 233 233455667988 998987642 112211 111 03
Q ss_pred CceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecccc-CCCC-CccCCCCCCC----CcEEEEcccccCCCCC
Q 002866 301 AAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSL-GPKD-MDSLGLSLFR----PDFIITSFYRVFGFDP 370 (872)
Q Consensus 301 ~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~-aG~~-mipLDLs~l~----~DFlv~S~HK~fG~~P 370 (872)
++++|.++..+|.||.++|.+. ++.|+++|+++++|.++. .... ..+..+..++ .++++.|++|+|| +
T Consensus 163 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g--~ 240 (400)
T 3asa_A 163 HIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLG--F 240 (400)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGT--T
T ss_pred CccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcC--C
Confidence 5789999999999999999752 456789999999999986 3211 0234444432 4599999999998 3
Q ss_pred Cc--eEEEEEeCCCc
Q 002866 371 TG--FGCLLIKKSVM 383 (872)
Q Consensus 371 tG--vG~LyVRk~~i 383 (872)
.| +|+++++++..
T Consensus 241 ~GlriG~~~~~~~~~ 255 (400)
T 3asa_A 241 AGIRLGWTVIPQELT 255 (400)
T ss_dssp TTCCCEEEECCTTCB
T ss_pred cchheeEEeeChhhc
Confidence 46 79999877654
No 161
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.40 E-value=1.9e-12 Score=141.21 Aligned_cols=165 Identities=12% Similarity=0.063 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.+.|++|++++|++ .|+||+|+|+|+.+++.++. +|++|++.. ..|.++.. .++..|++++.++++.
T Consensus 52 ~~~~~l~~~la~~~~~~----~v~~~~ggt~al~~~l~~l~--~gd~Vlv~~-~~~~~~~~---~~~~~G~~~~~v~~~~ 121 (424)
T 2po3_A 52 PLVREFEERVAGLAGVR----HAVATCNATAGLQLLAHAAG--LTGEVIMPS-MTFAATPH---ALRWIGLTPVFADIDP 121 (424)
T ss_dssp HHHHHHHHHHHHHHTSS----EEEEESCHHHHHHHHHHHHT--CCSEEEEES-SSCTHHHH---HHHHTTCEEEEECBCT
T ss_pred HHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcC--CCCEEEECC-CccHHHHH---HHHHcCCEEEEEecCC
Confidence 45678999999999983 49999999999999999874 578887663 34555543 3456799999999986
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCCCCCC-
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR- 354 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~- 354 (872)
.++.++.++|+++|.. ++++|.+. |.||...+++ +++.|+++|+++++|+++..|. .++...++
T Consensus 122 ~~~~~d~~~l~~~i~~--------~~~~v~~~---~~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~---~~~~~~~~~ 187 (424)
T 2po3_A 122 DTGNLDPDQVAAAVTP--------RTSAVVGV---HLWGRPCAADQLRKVADEHGLRLYFDAAHALGC---AVDGRPAGS 187 (424)
T ss_dssp TTSSBCHHHHGGGCCT--------TEEEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTC---EETTEETTS
T ss_pred CcCCcCHHHHHHhhCc--------CCcEEEEE---CCCCCcCCHHHHHHHHHHcCCEEEEECccccCC---eECCeeccc
Confidence 4577899988776642 57888874 4899999997 5577899999999999998764 12222222
Q ss_pred -CcEEEEccc--ccCCCCCCceEEEEEe-CCCccccc
Q 002866 355 -PDFIITSFY--RVFGFDPTGFGCLLIK-KSVMGSLQ 387 (872)
Q Consensus 355 -~DFlv~S~H--K~fG~~PtGvG~LyVR-k~~i~~L~ 387 (872)
+|++++|+| |+++ |-..|+++.+ +++++.+.
T Consensus 188 ~~di~~~S~sk~K~l~--~~~~G~~v~~~~~l~~~l~ 222 (424)
T 2po3_A 188 LGDAEVFSFHATKAVN--AFEGGAVVTDDADLAARIR 222 (424)
T ss_dssp SSSEEEEECCTTSSSC--CSSCEEEEESCHHHHHHHH
T ss_pred ccCEEEEeCCCCCCcc--CCCCeEEEeCCHHHHHHHH
Confidence 689999998 7777 4356777776 45555554
No 162
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.40 E-value=1.9e-12 Score=137.29 Aligned_cols=208 Identities=13% Similarity=0.063 Sum_probs=139.2
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc----CC--CCCCCcEEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL----NI--PENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL----gA--~~dEY~VVF 221 (872)
.++.|+.+...+ .|+.+++++.+. + .. ...|+.+. ...+.|+.||+++ |+ +++ .|+|
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~-------~-~~---~~~y~~~~---g~~~lr~~la~~l~~~~g~~~~~~--~i~~ 87 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNH-------T-HS---LNIYPKSA---FEESLRAAQRGFFKRRFKIELKEN--ELIS 87 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTT-------G-GG---GGSCCCTT---CCHHHHHHHHHHHHHHHSCCCCGG--GEEE
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHh-------h-hh---cCCCCCCC---CCHHHHHHHHHHHHHHhCCCCCHH--HEEE
Confidence 467777666543 567777765431 1 11 12344432 1235677777766 87 444 6999
Q ss_pred eCCHHHHHHHHHhhCCCCC--CCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCC
Q 002866 222 TVSRGSAFKLLAESYPFHT--NKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKD 299 (872)
Q Consensus 222 TsnATeALnLVaeslpf~~--Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~ 299 (872)
|+|+|+|+.+++..+ .++ |++|++..- .|. .+...++..|+++..+|++... .++. +|++.+..
T Consensus 88 t~g~~~al~~~~~~~-~~~~~gd~vl~~~p-~~~---~~~~~~~~~g~~~~~~~~~~~~-~~~~-~l~~~~~~------- 153 (376)
T 3ezs_A 88 TLGSREVLFNFPSFV-LFDYQNPTIAYPNP-FYQ---IYEGAAKFIKAKSLLMPLTKEN-DFTP-SLNEKELQ------- 153 (376)
T ss_dssp ESSSHHHHHHHHHHH-TTTCSSCEEEEEES-CCT---HHHHHHHHTTCEEEEEECCGGG-TSCC-CCCHHHHH-------
T ss_pred CcCcHHHHHHHHHHH-cCCCCCCEEEEecC-CcH---hHHHHHHHcCCEEEEcccCCCC-Ccch-hHHhhhcc-------
Confidence 999999999999887 467 899876532 233 3344567789999999987642 2333 56666653
Q ss_pred CCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccccCCCC-CccCCCC---------CCCCcEEEEccccc
Q 002866 300 SAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSLGPKD-MDSLGLS---------LFRPDFIITSFYRV 365 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~aG~~-mipLDLs---------~l~~DFlv~S~HK~ 365 (872)
++++|.++..+|.||.++|.+. ++.|+++|+++++|.++..... -.+..+. ..+.++++.|++|+
T Consensus 154 -~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 232 (376)
T 3ezs_A 154 -EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKR 232 (376)
T ss_dssp -HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTT
T ss_pred -CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhc
Confidence 3789999999999999999753 3457899999999999865210 0012221 45788999999999
Q ss_pred CCCCCCceEEEEEeCCCccccc
Q 002866 366 FGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 366 fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
||.+..++|+++.++++++.+.
T Consensus 233 ~g~~G~r~G~~~~~~~~~~~~~ 254 (376)
T 3ezs_A 233 SSAPGLRSGFIAGDSRLLEKYK 254 (376)
T ss_dssp TTCGGGCCEEEEECHHHHHHHH
T ss_pred cCCccceeEEEeeCHHHHHHHH
Confidence 9832234788888776665543
No 163
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.40 E-value=2.5e-12 Score=140.01 Aligned_cols=206 Identities=12% Similarity=0.010 Sum_probs=140.6
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCC------CCCCCcEEEeC
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNI------PENEYGLVFTV 223 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA------~~dEY~VVFTs 223 (872)
-+|+|..+.+|.++.+.+++.+ .+... ....|+.+. -..+.|+.|+++++. +++...|+||+
T Consensus 57 G~y~d~~~~~~~~~~v~~a~~~-------~~~~~--~~~~Y~~~~---g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~ 124 (420)
T 4f4e_A 57 GVYTNEDGKIPLLRAVRDAEKA-------RVEAG--LPRGYLPID---GIAAYDASVQKLLLGDDSPLIAAGRVVTAQAL 124 (420)
T ss_dssp CSCCCTTSCCCCCHHHHHHHHH-------HHHTC--CCCCCCCTT---CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEE
T ss_pred eeeECCCCCccCcHHHHHHHHH-------HhccC--CCCCCCCCC---CcHHHHHHHHHHhcCCCccccccCceEEEECC
Confidence 4688998999988888887532 12110 011233221 235788889988854 33311599999
Q ss_pred CHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec-cCCCCccCHHHHHHHHhhhhccCCCCC
Q 002866 224 SRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF-KWPTLKLCSTDLRKQISSKKRRKKDSA 301 (872)
Q Consensus 224 nATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv-d~p~g~Id~edLe~~I~~~~rr~~~~~ 301 (872)
|+|+|+++++..+. +.+||+|++..- .+. .....++..|+++..+|. +..+..++.++|++.|... .++
T Consensus 125 G~t~al~~~~~~~~~~~~gd~Vlv~~p-~~~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~ 195 (420)
T 4f4e_A 125 GGTGALKIGADFLRTLNPKAKVAISDP-SWE---NHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGY-----EPG 195 (420)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEES-CCH---HHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTC-----CTT
T ss_pred ccHHHHHHHHHHHHHhCCCCEEEEeCC-CcH---hHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhC-----CCC
Confidence 99999999854321 467899876532 223 334456678999999998 3335678999999998632 246
Q ss_pred ceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCC-C----CccC-CC-CCCCCcEEEEcccccCCCCC
Q 002866 302 AGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPK-D----MDSL-GL-SLFRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 302 T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~-~----mipL-DL-s~l~~DFlv~S~HK~fG~~P 370 (872)
++++.++..+|.||..+|.+ +++.|+++|+++++|.+..... + ..++ .+ ...+.++++.|++|.|| +
T Consensus 196 ~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~--~ 273 (420)
T 4f4e_A 196 TIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFS--L 273 (420)
T ss_dssp CEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT--C
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCc--C
Confidence 89999999999999999975 2356789999999999953221 0 0000 00 12456799999999998 5
Q ss_pred Cc--eEEEEE
Q 002866 371 TG--FGCLLI 378 (872)
Q Consensus 371 tG--vG~LyV 378 (872)
.| +|++++
T Consensus 274 ~G~RiG~~~~ 283 (420)
T 4f4e_A 274 YGERVGALSI 283 (420)
T ss_dssp GGGCEEEEEE
T ss_pred cCCCcEEEEE
Confidence 57 888875
No 164
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.39 E-value=7e-13 Score=143.24 Aligned_cols=204 Identities=15% Similarity=0.077 Sum_probs=136.6
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCC------CCCCCcEEE--
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNI------PENEYGLVF-- 221 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA------~~dEY~VVF-- 221 (872)
-.|||+++.++.++.+.+++.+ ..... .....|+.+ ....+.|+.|+++++. +++ .|+|
T Consensus 37 g~~~d~~~~~~~~~~v~~a~~~-------~~~~~-~~~~~y~~~---~g~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~ 103 (412)
T 1yaa_A 37 GAYRDDNGKPWVLPSVKAAEKL-------IHNDS-SYNHEYLGI---TGLPSLTSNAAKIIFGTQSDALQED--RVISVQ 103 (412)
T ss_dssp CCCBCTTSCBCCCHHHHHHHHH-------HHTCT-TCCCCCCCT---TCCHHHHHHHHHHHHCTTCHHHHTT--CEEEEE
T ss_pred eeeeCCCCCCCCcHHHHHHHHh-------hhcCc-ccccCCCCC---CCcHHHHHHHHHHHhcCCCCCCCcc--eEEEEe
Confidence 4688988888888888876421 01110 000123221 1245799999999842 455 4999
Q ss_pred eCCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec-cCCCCccCHHHHHHHHhhhhccCCC
Q 002866 222 TVSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF-KWPTLKLCSTDLRKQISSKKRRKKD 299 (872)
Q Consensus 222 TsnATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv-d~p~g~Id~edLe~~I~~~~rr~~~ 299 (872)
|+|+|+|+++++..+ .+.+|++|++..- .|... ...++..|+++..+|. +..+..++.++|++++... .
T Consensus 104 t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p-~~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-----~ 174 (412)
T 1yaa_A 104 SLSGTGALHISAKFFSKFFPDKLVYLSKP-TWANH---MAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKA-----P 174 (412)
T ss_dssp EEHHHHHHHHHHHHHHHHCTTCCEEEEES-CCTTH---HHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHS-----C
T ss_pred ccchHhHHHHHHHHHHHhCCCCEEEEeCC-CCccH---HHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhC-----C
Confidence 999999999874321 1357898876532 23333 3445667999999998 4335678999999988642 1
Q ss_pred CCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC-CCC-----CccC-CCCCCC----CcEEEEcccc
Q 002866 300 SAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG-PKD-----MDSL-GLSLFR----PDFIITSFYR 364 (872)
Q Consensus 300 ~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a-G~~-----mipL-DLs~l~----~DFlv~S~HK 364 (872)
+.+.++++++.+|.||.++|.+ +++.|+++|+++++|.++.. ..+ ..++ ++.... .++++.|++|
T Consensus 175 ~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (412)
T 1yaa_A 175 EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAK 254 (412)
T ss_dssp TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTT
T ss_pred CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCC
Confidence 2367777799999999999875 34567899999999999742 110 0122 222223 3688999999
Q ss_pred cCCCCCCc--eEEEE
Q 002866 365 VFGFDPTG--FGCLL 377 (872)
Q Consensus 365 ~fG~~PtG--vG~Ly 377 (872)
.|| |.| +|+++
T Consensus 255 ~~~--~~GlriG~~~ 267 (412)
T 1yaa_A 255 NAG--MYGERVGCFH 267 (412)
T ss_dssp TSC--CGGGCEEEEE
T ss_pred CCC--CcCCcceEEE
Confidence 998 678 69888
No 165
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.39 E-value=9e-13 Score=156.66 Aligned_cols=178 Identities=11% Similarity=0.011 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.++|+.+|+++|++. .+++|+|+|+|+..++.++ .++||+||+.. ..|.++... .++..|+++++++...
T Consensus 173 ~~i~e~e~~lA~~~gae~---~i~v~nGtt~an~~ai~al-~~pGD~VLv~~-~~H~S~~~~--~~~l~Ga~~v~v~~~~ 245 (730)
T 1c4k_A 173 GPAVAAEKHAARVYNADK---TYFVLGGSSNANNTVTSAL-VSNGDLVLFDR-NNHKSVYNS--ALAMAGGRPVYLQTNR 245 (730)
T ss_dssp THHHHHHHHHHHHTTCSE---EEEESSHHHHHHHHHHHHH-CCTTCEEEEET-TCCHHHHHH--HTTTTCCEEEEECEEE
T ss_pred HHHHHHHHHHHHHHCCCc---EEEECCHHHHHHHHHHHHh-cCCCCEEEEcC-CchHHHHHH--HHHHCCCEEEEEeCCc
Confidence 357899999999999963 4888888889999999887 47899988764 457776542 1345799999887643
Q ss_pred CC----CccCHHHH-----HHHHhhhhcc-CCCCCc-eEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCC--
Q 002866 277 PT----LKLCSTDL-----RKQISSKKRR-KKDSAA-GLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGP-- 342 (872)
Q Consensus 277 p~----g~Id~edL-----e~~I~~~~rr-~~~~~T-~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG-- 342 (872)
+. +.++.++| +++|.....+ ..+.++ ++++++.- |.+|.++|++ +++.|+++|+++++|+|+..+
T Consensus 246 ~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~ 324 (730)
T 1c4k_A 246 NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQ 324 (730)
T ss_dssp CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGG
T ss_pred cccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccc
Confidence 21 34678888 7777531000 001112 78888875 6799999998 557889999999999998642
Q ss_pred CC-----CccCCCCCCCCc----EEEEcccccCCCCCCceEEEEEeCCCc
Q 002866 343 KD-----MDSLGLSLFRPD----FIITSFYRVFGFDPTGFGCLLIKKSVM 383 (872)
Q Consensus 343 ~~-----mipLDLs~l~~D----Flv~S~HK~fG~~PtGvG~LyVRk~~i 383 (872)
.. ..++++..+++| +++.|+||++++ |.|.|+++++++.+
T Consensus 325 f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g-~~~gg~I~v~~~~l 373 (730)
T 1c4k_A 325 FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAG-FSQTSQIHKKDSHI 373 (730)
T ss_dssp SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSC-CTTCEEEEEECGGG
T ss_pred cCcccCCcCcccccccCCCCCCEEEEECCCCCCCC-CCCEEEEEecchhh
Confidence 10 013555556888 999999999998 89999999998753
No 166
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.39 E-value=9e-13 Score=143.34 Aligned_cols=178 Identities=12% Similarity=0.174 Sum_probs=126.6
Q ss_pred HHHHHHHHHHhcC--------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEE
Q 002866 199 EHDIKTRIMDHLN--------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVY 270 (872)
Q Consensus 199 ieeARerIA~lLg--------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~ 270 (872)
..+.|++||++++ ++++ .|+||+|+|+|+.+++..+ .++|++|++..- .|..... ..+...|+++.
T Consensus 85 ~~~lr~~la~~~~~~~g~~~~~~~~--~i~~~~G~~~ai~~~~~~~-~~~gd~Vl~~~p-~y~~~~~--~~~~~~g~~~~ 158 (428)
T 1iay_A 85 LPEFRKAIAKFMEKTRGGRVRFDPE--RVVMAGGATGANETIIFCL-ADPGDAFLVPSP-YYPAFNR--DLRWRTGVQLI 158 (428)
T ss_dssp CHHHHHHHHHHHHHHTTTCSCCCTT--SCEEEEHHHHHHHHHHHHH-CCTTCEEEEESS-CCTTHHH--HTTTTTCCEEE
T ss_pred cHHHHHHHHHHHHHhcCCCCCCChh--hEEEccChHHHHHHHHHHh-CCCCCeEEEccC-CCcchHH--HHHHhcCCEEE
Confidence 3578899999887 6665 5999999999999999887 368999887633 3343322 12235799999
Q ss_pred EEeccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc---HH-HHHHHHHCCcEEEeeccccCCC-C
Q 002866 271 SAWFKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS---YQ-WMALAQQNHWHVLLDAGSLGPK-D 344 (872)
Q Consensus 271 ~Vpvd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P---Le-~I~~Are~G~~VLVDAAQ~aG~-~ 344 (872)
.+|.+.. +..++.++|+++|..... ..+++++|.++..+|.||.++| ++ +++.|+++|+++++|.++.... .
T Consensus 159 ~v~~~~~~~~~~d~~~l~~~l~~~~~--~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~ 236 (428)
T 1iay_A 159 PIHCESSNNFKITSKAVKEAYENAQK--SNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFD 236 (428)
T ss_dssp EECCCTTTTTCCCHHHHHHHHHHHHH--TTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCS
T ss_pred EeecCCccCCcCCHHHHHHHHHHHHh--cCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccC
Confidence 9988642 235789999988864211 1236899999999999999999 65 4567789999999999986521 0
Q ss_pred -CccCCCCC---------CCCc--EEEEcccccCCCCCCc--eEEEEE-eCCCcccc
Q 002866 345 -MDSLGLSL---------FRPD--FIITSFYRVFGFDPTG--FGCLLI-KKSVMGSL 386 (872)
Q Consensus 345 -mipLDLs~---------l~~D--Flv~S~HK~fG~~PtG--vG~LyV-Rk~~i~~L 386 (872)
....++.. +++| +++.|+||+||. .| +|++++ ++.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~--~Glr~G~~~~~~~~~~~~~ 291 (428)
T 1iay_A 237 TPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGL--PGFRVGIIYSFNDDVVNCA 291 (428)
T ss_dssp SSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSC--GGGCEEEEEESCHHHHHHH
T ss_pred CCCccCHHHhccccccccCCCCcEEEEecchhhcCC--CCceEEEEEeCCHHHHHHH
Confidence 00112211 2278 899999999983 37 599998 45555544
No 167
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.38 E-value=5.3e-12 Score=135.53 Aligned_cols=167 Identities=13% Similarity=0.072 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHH-HHHHH-HHHcCcEEEEEec
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVN-WMAQS-AKEKGAKVYSAWF 274 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl-~~~~~-AkrkGaeV~~Vpv 274 (872)
...+.+|+.+++++|++. ..++|.|+|+|+.+++..+ .++|++|++.. ..|.++. ..... ....++++..+++
T Consensus 78 ~~~~~a~~~~~~~~~~~~---~~v~~~~Gs~a~~~al~~~-~~~gd~Vi~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~ 152 (425)
T 3ecd_A 78 EVEALAIERVKRLFNAGH---ANVQPHSGAQANGAVMLAL-AKPGDTVLGMS-LDAGGHLTHGAKPALSGKWFNALQYGV 152 (425)
T ss_dssp HHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHH-CCTTCEEEEEC-C------------------CEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCC---ceeecCchHHHHHHHHHHc-cCCCCEEEEcc-cccccceecchhhhhcccceeeeecCC
Confidence 345567899999999864 2567999999999998887 68899988663 3344421 22111 1222345556666
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCC--ccCCCC
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDM--DSLGLS 351 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~m--ipLDLs 351 (872)
+..++.++.++|+++|... ++++|.+...+| |...+++ +.+.|+++|+++++|.+|+.|... .....-
T Consensus 153 ~~~~~~~d~~~l~~~i~~~-------~~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~ 223 (425)
T 3ecd_A 153 SRDTMLIDYDQVEALAQQH-------KPSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPV 223 (425)
T ss_dssp CTTTSSCCHHHHHHHHHHH-------CCSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG
T ss_pred CcccCccCHHHHHHHHhhc-------CCcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCch
Confidence 5445678999999998642 477888875444 8899997 456789999999999998654200 011111
Q ss_pred CCCCcEEEEcccccCCCCCCceEEEEEeC
Q 002866 352 LFRPDFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 352 ~l~~DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
-.+|++++|+||+|++ |.| |+++.++
T Consensus 224 -~~~di~~~s~sK~l~g-~~~-g~~~~~~ 249 (425)
T 3ecd_A 224 -EHAHVVTSTTHKTLRG-PRG-GFVLTND 249 (425)
T ss_dssp -GTCSEEEEESSGGGCC-CSC-EEEEESC
T ss_pred -hcCcEEEecCCcccCC-CCc-EEEEeCC
Confidence 1379999999999977 764 8888764
No 168
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.36 E-value=1.3e-12 Score=143.30 Aligned_cols=200 Identities=13% Similarity=0.080 Sum_probs=129.9
Q ss_pred CceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhcc-CcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEeCCHHH
Q 002866 149 PKVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSN-HALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFTVSRGS 227 (872)
Q Consensus 149 ~~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~-~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFTsnATe 227 (872)
+..|||+++..+. +.+++++.+ .+.. ...|+++. ...+.|++||+++|++ .|+||+|+|+
T Consensus 40 ~~~ylD~~~~~~~-~~v~~a~~~-----------~l~~~~~~y~~~~---~~~~l~~~la~~~~~~----~v~~t~~gt~ 100 (467)
T 2oqx_A 40 EDVFIDLLTDSGT-GAVTQSMQA-----------AMMRGDEAYSGSR---SYYALAESVKNIFGYQ----YTIPTHQGRG 100 (467)
T ss_dssp GGCSEECSCCSSC-SCCCHHHHH-----------HTTSCCCCSSSCH---HHHHHHHHHHHHHCCS----EEEEEC--CC
T ss_pred CCeeEecccCCCc-HHHHHHHHH-----------HhccCcceeccCc---hhHHHHHHHHHHhCcC----cEEEcCCcHH
Confidence 4789999887766 344444321 1111 12355432 3567899999999873 4999999999
Q ss_pred HHHHHHhhCCCCC-----C----CeEEEecccCc-hhHHHHHHHHHHcCcEEEEEe------cc---CCCCccCHHHHHH
Q 002866 228 AFKLLAESYPFHT-----N----KKLLTMFDYES-QSVNWMAQSAKEKGAKVYSAW------FK---WPTLKLCSTDLRK 288 (872)
Q Consensus 228 ALnLVaeslpf~~-----G----d~ILT~~DhEH-nSVl~~~~~AkrkGaeV~~Vp------vd---~p~g~Id~edLe~ 288 (872)
|+.+++..+. ++ | |+|++. . .| .+...+. ...|+.+.... .+ ..++.++.++|++
T Consensus 101 A~~~al~~~~-~~~~~~~G~~~~d~Ii~~-~-~h~~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~ 174 (467)
T 2oqx_A 101 AEQIYIPVLI-KKREQEKGLDRSKMVAFS-N-YFFDTTQGHS---QINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLER 174 (467)
T ss_dssp SHHHHHHHHH-HHHHHHHCCCTTTCEEEE-S-SCCHHHHHHH---HHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHH
T ss_pred HHHHHHHHHh-ccccccCCCCccceEEec-c-cccccchhhh---hccCcceeeccccccccCCCCCCccCCcCHHHHHH
Confidence 9998887752 44 6 887765 3 34 2222222 33466655431 11 0135689999999
Q ss_pred HHhhhhccCCCCCceEEEEeCccCcc-cchhcHH----HHHHHHHCCcEEEeeccccC-----------CCCCccCCCCC
Q 002866 289 QISSKKRRKKDSAAGLFVFPVQSRVT-GAKYSYQ----WMALAQQNHWHVLLDAGSLG-----------PKDMDSLGLSL 352 (872)
Q Consensus 289 ~I~~~~rr~~~~~T~LVa~p~vSNvT-G~i~PLe----~I~~Are~G~~VLVDAAQ~a-----------G~~mipLDLs~ 352 (872)
+|.... .++|++|++...+|.+ |.++|.+ +.+.|+++|+++++|++|+. +. ..+++..
T Consensus 175 ~i~~~~----~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~--~g~~~~~ 248 (467)
T 2oqx_A 175 GIEEVG----PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEY--KDWTIEQ 248 (467)
T ss_dssp HHHHHC----GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGG--TTSCHHH
T ss_pred HHHhcC----CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccc--cCccHHH
Confidence 997421 1248899999999998 8877753 34678999999999998866 32 1223322
Q ss_pred ------CCCcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 353 ------FRPDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 353 ------l~~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
..+|++++|+||+||. |.| |+++.++.
T Consensus 249 ~~~~~~~~~d~~~~s~sK~~g~-~~G-g~~~~~~~ 281 (467)
T 2oqx_A 249 ITRETYKYADMLAMSAKKDAMV-PMG-GLLCMKDD 281 (467)
T ss_dssp HHHHHGGGCSEEEEESSSTTCC-SSC-EEEEECSG
T ss_pred HhhhhhccCCeEEEecccccCC-CCc-eEEEecCh
Confidence 2478999999999997 656 66666666
No 169
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.36 E-value=4.3e-12 Score=140.82 Aligned_cols=176 Identities=11% Similarity=0.141 Sum_probs=128.4
Q ss_pred HHHHHHHHHHhc----CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEec
Q 002866 199 EHDIKTRIMDHL----NIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF 274 (872)
Q Consensus 199 ieeARerIA~lL----gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv 274 (872)
..+.|+.||+++ |++ +...|+||+|+|+|+.+++..+ .++||.|++..- .+. .+...++..|+++..+|.
T Consensus 120 ~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l-~~~Gd~Vlv~~p-~y~---~~~~~~~~~g~~~~~v~~ 193 (448)
T 3aow_A 120 FTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVF-LNPGDIVVVEAP-TYL---AALQAFNFYEPQYIQIPL 193 (448)
T ss_dssp CHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHH-CCTTCEEEEEES-CCH---HHHHHHHTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHH-cCCCCEEEEeCC-ChH---HHHHHHHHcCCEEEEecc
Confidence 357888899888 984 2236999999999999999987 578999887532 233 334456668999999998
Q ss_pred cCCCCccCHHHHHHHHhhhhccCCCCCceEE-EEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCCC--Ccc
Q 002866 275 KWPTLKLCSTDLRKQISSKKRRKKDSAAGLF-VFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPKD--MDS 347 (872)
Q Consensus 275 d~p~g~Id~edLe~~I~~~~rr~~~~~T~LV-a~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~~--mip 347 (872)
+. ++ ++.++|+++|..... ...++++| +++..+|.||.++|.+ +++.|+++|+++++|.++....- ...
T Consensus 194 ~~-~g-~d~~~L~~~l~~~~~--~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~ 269 (448)
T 3aow_A 194 DD-EG-MKVEILEEKLKELKS--QGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPE 269 (448)
T ss_dssp ET-TE-ECHHHHHHHHHHHHH--TTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCC
T ss_pred CC-CC-CCHHHHHHHHhhhhc--cCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCC
Confidence 76 34 899999998862100 01257886 6899999999999974 34677999999999999865310 011
Q ss_pred CCC---CCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 348 LGL---SLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 348 LDL---s~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
..+ ...+.++++.|+.|+|| | | +|++++++++++.+.
T Consensus 270 ~~~~~~~~~~~vi~~~S~SK~~~--~-GlriG~v~~~~~l~~~l~ 311 (448)
T 3aow_A 270 KKIKALDNEGRVIYLGTFSKILA--P-GFRIGWMVGDPGIIRKME 311 (448)
T ss_dssp CCTGGGCTTSCEEEEEESTTTTC--G-GGCCEEEEECHHHHHHHH
T ss_pred cCHHhcCCCCCEEEEccchhhcc--c-cccEEEEEeCHHHHHHHH
Confidence 222 22356799999999998 3 7 899999887766554
No 170
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.35 E-value=3.1e-12 Score=141.08 Aligned_cols=170 Identities=11% Similarity=0.109 Sum_probs=124.1
Q ss_pred HHHHHHHHHhc----CC--CCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHL----NI--PENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lL----gA--~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.||+++ |. +++ .|+||+|+|+|+.+++.++ ..+|++|++..- .|.... ..++..|+++..+|
T Consensus 98 ~~lr~~ia~~l~~~~g~~~~~~--~v~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p-~y~~~~---~~~~~~g~~~~~v~ 170 (447)
T 3b46_A 98 PSLINSLIKLYSPIYNTELKAE--NVTVTTGANEGILSCLMGL-LNAGDEVIVFEP-FFDQYI---PNIELCGGKVVYVP 170 (447)
T ss_dssp HHHHHHHHHHHTTTTTSCCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEES-CCTTHH---HHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCChh--hEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCC-CchhHH---HHHHHcCCEEEEEe
Confidence 46778888876 43 443 6999999999999999987 578999876543 233333 34566799999999
Q ss_pred ccCC-----------CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH---H-HHHHHHHCCcEEEeecc
Q 002866 274 FKWP-----------TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAG 338 (872)
Q Consensus 274 vd~p-----------~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAA 338 (872)
++.. +..++.++|+++|. +++++|.+++.+|.||.++|. + +++.|+++|+++++|.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~ 242 (447)
T 3b46_A 171 INPPKELDQRNTRGEEWTIDFEQFEKAIT--------SKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEV 242 (447)
T ss_dssp EECCGGGGTSCBCSTTSEECHHHHHTTCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCccccccccccccCcccCHHHHHHhhc--------cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEecc
Confidence 8643 24678888887664 258999999999999999874 3 34677999999999999
Q ss_pred ccCCC---CCccC-CC--CCCCCcEEEEcccccCCCCCCc--eEEEEE-eCCCcccc
Q 002866 339 SLGPK---DMDSL-GL--SLFRPDFIITSFYRVFGFDPTG--FGCLLI-KKSVMGSL 386 (872)
Q Consensus 339 Q~aG~---~mipL-DL--s~l~~DFlv~S~HK~fG~~PtG--vG~LyV-Rk~~i~~L 386 (872)
+.... ...++ .+ ...+.|+++.|++|+|| +.| +|++++ ++++++.+
T Consensus 243 ~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~--~~G~riG~~~~~~~~l~~~l 297 (447)
T 3b46_A 243 YEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFA--ATGWRIGWVLSLNAELLSYA 297 (447)
T ss_dssp TTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTT--CTTSCCEEEECSCHHHHHHH
T ss_pred chhcccCCCCcCHHHcCCCCCCcEEEEecCchhcC--CcchhhEEEEeCCHHHHHHH
Confidence 86421 00111 12 12478999999999998 457 999998 66665544
No 171
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.35 E-value=1.8e-12 Score=139.81 Aligned_cols=205 Identities=11% Similarity=-0.021 Sum_probs=137.2
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc-CC-----CCCCCcEEE--
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL-NI-----PENEYGLVF-- 221 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL-gA-----~~dEY~VVF-- 221 (872)
-+|+|..+..+.++.+.+++.+ ..........|+.. ....+.|++||+++ +. +++ .|+|
T Consensus 38 g~~~~~~~~~~~~~~v~~a~~~--------~~~~~~~~~~y~~~---~g~~~lr~~la~~~~~~~~~~~~~~--~v~~~~ 104 (412)
T 1ajs_A 38 GAYRTDDCQPWVLPVVRKVEQR--------IANNSSLNHEYLPI---LGLAEFRTCASRLALGDDSPALQEK--RVGGVQ 104 (412)
T ss_dssp CCCCCTTSCCCCCHHHHHHHHH--------HHTCTTCCCCCCCT---TCCHHHHHHHHHHHHCTTCHHHHTT--CEEEEE
T ss_pred ceecCCCCCccccHHHHHHHHH--------hhhChhhccCCCCC---CCCHHHHHHHHHHHhcCCCCccCCC--cEEEEE
Confidence 4567776667777777776432 11000011123321 12458999999999 53 555 4999
Q ss_pred eCCHHHHHHHHHhhCC-CCCC-----CeEEEecccCchhHHHHHHHHHHcCcE-EEEEeccC-CCCccCHHHHHHHHhhh
Q 002866 222 TVSRGSAFKLLAESYP-FHTN-----KKLLTMFDYESQSVNWMAQSAKEKGAK-VYSAWFKW-PTLKLCSTDLRKQISSK 293 (872)
Q Consensus 222 TsnATeALnLVaeslp-f~~G-----d~ILT~~DhEHnSVl~~~~~AkrkGae-V~~Vpvd~-p~g~Id~edLe~~I~~~ 293 (872)
|+|+|+|+.+++..+. +.+| ++|++..- .|.. +...++..|++ +..+|.+. .+..++.++|++++...
T Consensus 105 t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p-~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 180 (412)
T 1ajs_A 105 SLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSP-TWEN---HNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENA 180 (412)
T ss_dssp EEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEES-CCTH---HHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCC-CcHH---HHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhC
Confidence 9999999999864321 3578 88876532 2232 34456668999 99998842 24568999999988642
Q ss_pred hccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccc-cCCCC-----CccCC-CCC-CCCcEEEEc
Q 002866 294 KRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGS-LGPKD-----MDSLG-LSL-FRPDFIITS 361 (872)
Q Consensus 294 ~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ-~aG~~-----mipLD-Ls~-l~~DFlv~S 361 (872)
.+++.+++++..+|.||.++|.+ +++.|+++|+++++|.++ ..+.. ..++. +.. ..-++++.|
T Consensus 181 -----~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 255 (412)
T 1ajs_A 181 -----PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQS 255 (412)
T ss_dssp -----CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEE
T ss_pred -----CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEe
Confidence 23578999999999999999875 345678999999999994 33321 01121 211 123489999
Q ss_pred ccccCCCCCCc--eEEEEE
Q 002866 362 FYRVFGFDPTG--FGCLLI 378 (872)
Q Consensus 362 ~HK~fG~~PtG--vG~LyV 378 (872)
++|.|| |.| +|++++
T Consensus 256 ~sK~~~--~~G~riG~~~~ 272 (412)
T 1ajs_A 256 FSKNFG--LYNERVGNLTV 272 (412)
T ss_dssp CTTTSC--CGGGCEEEEEE
T ss_pred cccccC--CCCcceEEEEE
Confidence 999998 668 899998
No 172
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.33 E-value=7.4e-12 Score=138.50 Aligned_cols=201 Identities=11% Similarity=0.046 Sum_probs=136.7
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHH-hhccCcCcCCCchHHHHHHHHHHHHHhc-CCC-----CCCCcEEE-
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITA-NLSNHALYGGAEKGTVEHDIKTRIMDHL-NIP-----ENEYGLVF- 221 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~-nL~~~~~ygNpsS~~~ieeARerIA~lL-gA~-----~dEY~VVF- 221 (872)
-+|+|+.+.+++.+.+.+++. .+.. .......|..+ .-+.+.|+.|++++ |++ ++ .|+|
T Consensus 57 g~~~d~~~~~~v~~av~~a~~--------~~~~~~~~~~~~Y~~~---~G~~~lr~~ia~~l~g~~~~~~~~~--~i~~~ 123 (448)
T 3meb_A 57 GAYRDESGKPWILPAVKEAEA--------IISSDLSKYNKEYPPV---AGFPLFLEAAQFLMFGKDSKAAQEG--RIASC 123 (448)
T ss_dssp CCCCCTTSCCCCCHHHHHHHH--------HHHHCTTTTCCSCCCT---TCCHHHHHHHHHHHHCTTCHHHHTT--CEEEE
T ss_pred ccccCCCCCEechHHHHHHHH--------HHhhcccCCCCCCCCC---cchHHHHHHHHHHhcCCCccccCcC--cEEEE
Confidence 579999999998888877632 1220 00001123221 12457999999998 876 44 5999
Q ss_pred -eCCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHHH----HcCcEEEEEec-cCC-CCccCHHHHHHHHhhh
Q 002866 222 -TVSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSAK----EKGAKVYSAWF-KWP-TLKLCSTDLRKQISSK 293 (872)
Q Consensus 222 -TsnATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~Ak----rkGaeV~~Vpv-d~p-~g~Id~edLe~~I~~~ 293 (872)
|+|+|+|+++++..+ -+.+|++|++..- .|.... ..++ ..|+++..+|. +.. ++.++.++|++.|...
T Consensus 124 ~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p-~~~~~~---~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~ 199 (448)
T 3meb_A 124 QSLSGTGSLHIGFEFLHLWMPKAEFYMPST-TWPNHY---GIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSA 199 (448)
T ss_dssp EESHHHHHHHHHHHHHHHHCTTCCEEEESS-CCTHHH---HHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHS
T ss_pred ECCcHHHHHHHHHHHHHHhCCCCEEEECCC-CCHhHH---HHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhC
Confidence 999999999854321 1357899887632 233333 3344 67999999998 543 4788999999998742
Q ss_pred hccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecc-ccCCCCCccCC-----C----CCCCCcEEE
Q 002866 294 KRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAG-SLGPKDMDSLG-----L----SLFRPDFII 359 (872)
Q Consensus 294 ~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAA-Q~aG~~mipLD-----L----s~l~~DFlv 359 (872)
..++.++.++..+|.||+.+|.+. ++.|+++|+++++|.+ +..+.. +++ + ....-.+++
T Consensus 200 -----~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~--~~~~~~~~~~~~~~~~~~~i~~ 272 (448)
T 3meb_A 200 -----PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATG--SFEADAFAVRMFVDAGVEVLVA 272 (448)
T ss_dssp -----CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSS--CHHHHTHHHHHHHHTTCCEEEE
T ss_pred -----CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCC--CcccCchhHHHHhhcCCcEEEE
Confidence 235789999999999999999853 3567899999999999 434331 211 1 112234779
Q ss_pred EcccccCCCCCCc--eEEE
Q 002866 360 TSFYRVFGFDPTG--FGCL 376 (872)
Q Consensus 360 ~S~HK~fG~~PtG--vG~L 376 (872)
.|++|.|| +.| +|++
T Consensus 273 ~S~SK~~g--~~G~RiG~l 289 (448)
T 3meb_A 273 QSFSKNFG--LYGERIGCL 289 (448)
T ss_dssp EECTTTSC--CGGGCCEEE
T ss_pred ecccccCC--Cccccceee
Confidence 99999998 457 7877
No 173
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.33 E-value=1.8e-12 Score=141.22 Aligned_cols=173 Identities=13% Similarity=0.061 Sum_probs=125.1
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHH--HHHHhhCCC-CC----------CCeEEEecccCchhHHHHHHHHHHc
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAF--KLLAESYPF-HT----------NKKLLTMFDYESQSVNWMAQSAKEK 265 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeAL--nLVaeslpf-~~----------Gd~ILT~~DhEHnSVl~~~~~Akrk 265 (872)
+.+.|+.||++++++++ .|+||+|+|+|+ ++++..+.. .+ |++|++.. ++.......++..
T Consensus 80 ~~~lr~~ia~~~~~~~~--~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~----p~y~~~~~~~~~~ 153 (427)
T 3ppl_A 80 IVDIRQIWADLLGVPVE--QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPV----PGYDRHFSITERF 153 (427)
T ss_dssp CHHHHHHHHHHHTSCGG--GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEE----SCCHHHHHHHHHT
T ss_pred cHHHHHHHHHHhCCCcc--eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcC----CCcHHHHHHHHHc
Confidence 45799999999999876 599999999999 577776521 13 88887652 2223344556778
Q ss_pred CcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEE-eCccCcccchhcHHH----HHHH-HHCCcEEEeeccc
Q 002866 266 GAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVF-PVQSRVTGAKYSYQW----MALA-QQNHWHVLLDAGS 339 (872)
Q Consensus 266 GaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~-p~vSNvTG~i~PLe~----I~~A-re~G~~VLVDAAQ 339 (872)
|++++.+|++.. + ++.++|++++.. +++++|.+ |..+|.||+++|.+. ++.| +++|+++++|.++
T Consensus 154 g~~~~~v~~~~~-g-~d~~~l~~~l~~-------~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y 224 (427)
T 3ppl_A 154 GFEMISVPMNED-G-PDMDAVEELVKN-------PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAY 224 (427)
T ss_dssp TCEEEEEEEETT-E-ECHHHHHHHTTS-------TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTT
T ss_pred CCEEEEeCCCCC-C-CCHHHHHHHHhc-------CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCC
Confidence 999999999863 4 899999988842 25777764 589999999999972 3456 8899999999997
Q ss_pred cC----CCCCccCCCC-------CCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 340 LG----PKDMDSLGLS-------LFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 340 ~a----G~~mipLDLs-------~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.. +....++++. ..+.++++.|++|++++ ..++|+++.++++++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-G~r~G~~~~~~~l~~~~~ 282 (427)
T 3ppl_A 225 AVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLA-GAGVSFFLTSAENRKWYT 282 (427)
T ss_dssp TTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCT-TSSCEEEECCHHHHHHHH
T ss_pred cccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCc-CccEEEEEcCHHHHHHHH
Confidence 53 1100122222 34678999999999554 567888887776655443
No 174
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.33 E-value=1e-11 Score=135.57 Aligned_cols=177 Identities=14% Similarity=0.095 Sum_probs=123.1
Q ss_pred HHHHHHHHh----cCCCCCC-------CcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEE
Q 002866 201 DIKTRIMDH----LNIPENE-------YGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKV 269 (872)
Q Consensus 201 eARerIA~l----LgA~~dE-------Y~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV 269 (872)
+.|+.|+++ .|++.++ ..|+||+|+|+|+.+++.++ .++||+|++..- .+. .+...++..|+++
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p-~y~---~~~~~~~~~g~~~ 156 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMI-INPGDNVLLDEP-AYS---GTLQSLHPLGCNI 156 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHH-CCTTCEEEEESS-CCH---HHHHHHGGGTCEE
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHh-CCCCCEEEEeCC-CcH---HHHHHHHHcCCEE
Confidence 345555554 5876421 26999999999999999987 478999887632 233 3445567789999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhcc----CCCCCceEEEE-eCccCcccchhcHH----HHHHHHHCCcEEEeecccc
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRR----KKDSAAGLFVF-PVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSL 340 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr----~~~~~T~LVa~-p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~ 340 (872)
..+|++. + .++.++|++++.....+ ....++++|.+ +..+|.||.++|.+ +++.|+++|+++++|.++.
T Consensus 157 ~~v~~~~-~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~ 234 (425)
T 2r2n_A 157 INVASDE-S-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYY 234 (425)
T ss_dssp EEECEET-T-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG
T ss_pred EEeCcCC-C-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 9999875 3 38899999988631000 00135777755 89999999999986 3456789999999999975
Q ss_pred ----CCCCCccCCCCC---CCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 341 ----GPKDMDSLGLSL---FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 341 ----aG~~mipLDLs~---l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.|. ....+.. .+.++++.|++|+||. -..+|++++++++++.+.
T Consensus 235 ~~~~~g~--~~~~~~~~~~~~~~i~~~s~SK~~~~-GlRiG~~~~~~~l~~~l~ 285 (425)
T 2r2n_A 235 FLQFNKF--RVPTFLSMDVDGRVIRADSFSKIISS-GLRIGFLTGPKPLIERVI 285 (425)
T ss_dssp GGBSSSS--CCCCTGGGCTTSCEEEEEESTTTTCS-TTCCEEEEEEHHHHHHHH
T ss_pred cccCCCC--CCCCccccCCCCCEEEEccchhhccC-ccceEEEecCHHHHHHHH
Confidence 232 1223322 3456999999999982 122799999887665554
No 175
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.32 E-value=4.8e-12 Score=138.19 Aligned_cols=170 Identities=12% Similarity=0.165 Sum_probs=122.5
Q ss_pred HHHHHHHHHhcC--------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHH-HcCcEEE
Q 002866 200 HDIKTRIMDHLN--------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAK-EKGAKVY 270 (872)
Q Consensus 200 eeARerIA~lLg--------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~Ak-rkGaeV~ 270 (872)
.+.|++||++++ ++++ .|+||+|+|+|+.+++..+ .++|+.|++..- .|.+... .++ ..|+++.
T Consensus 89 ~~l~~~la~~~~~~~~~~~~~~~~--~v~~~~gg~~a~~~~~~~l-~~~gd~vl~~~p-~~~~~~~---~~~~~~g~~~~ 161 (435)
T 3piu_A 89 PAFKKAMVDFMAEIRGNKVTFDPN--HLVLTAGATSANETFIFCL-ADPGEAVLIPTP-YYPGFDR---DLKWRTGVEIV 161 (435)
T ss_dssp HHHHHHHHHHHHHHTTTSSCCCGG--GEEEEEHHHHHHHHHHHHH-CCTTCEEEEEES-CCTTHHH---HTTTTTCCEEE
T ss_pred HHHHHHHHHHHHHhhCCCCCCCHH--HEEEcCChHHHHHHHHHHh-cCCCCeEEECCC-ccccHHH---HHHHhcCCEEE
Confidence 578999999988 5555 5999999999999999987 478899876532 3444432 233 4799999
Q ss_pred EEeccCCC-CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC----
Q 002866 271 SAWFKWPT-LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG---- 341 (872)
Q Consensus 271 ~Vpvd~p~-g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a---- 341 (872)
.++++... ..++.++|+++|..... ...++++|.++..+|.||.++|.+ +++.|+++|+++++|.++..
T Consensus 162 ~~~~~~~~~~~~d~~~l~~~l~~~~~--~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~ 239 (435)
T 3piu_A 162 PIHCTSSNGFQITETALEEAYQEAEK--RNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 239 (435)
T ss_dssp EEECCGGGTSCCCHHHHHHHHHHHHH--TTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCS
T ss_pred EeeCCCccCCcCCHHHHHHHHHHHHh--cCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 99987532 34789999999875321 234689999999999999999985 23567899999999999865
Q ss_pred CCCCccCCCCCC-------------CCcEEEEcccccCCCCCCceEEEEEeC
Q 002866 342 PKDMDSLGLSLF-------------RPDFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 342 G~~mipLDLs~l-------------~~DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
+. ....+..+ +..+++.|++|.||.+...+|++++++
T Consensus 240 ~~--~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~ 289 (435)
T 3piu_A 240 SP--SFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSND 289 (435)
T ss_dssp SS--CCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESC
T ss_pred CC--CCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCC
Confidence 22 11222111 122889999999983122379998744
No 176
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.32 E-value=5.9e-12 Score=139.27 Aligned_cols=172 Identities=11% Similarity=0.003 Sum_probs=119.7
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchh-HH-HHHHHHHHcCcEEEEEeccC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQS-VN-WMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnS-Vl-~~~~~AkrkGaeV~~Vpvd~ 276 (872)
.+-+|+++++++|++. ..+++.++|+|+..++.++ .++||+|++.. ..|.+ +. .........++.+..++++.
T Consensus 93 e~~a~~~la~~~g~~~---~~v~~~sGs~a~~~a~~~~-~~~Gd~Vl~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 167 (447)
T 3h7f_A 93 ENLARDRAKALFGAEF---ANVQPHSGAQANAAVLHAL-MSPGERLLGLD-LANGGHLTHGMRLNFSGKLYENGFYGVDP 167 (447)
T ss_dssp HHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHH-CCTTCEEEEEC-GGGTCCGGGTCTTSHHHHSSEEEEECCCT
T ss_pred HHHHHHHHHHHcCCCc---eEEEeCCHHHHHHHHHHHh-cCCCCEEEecC-cccccccchhhhhhhcCCeeEEEEcCcCc
Confidence 3345599999999964 3554778899999888876 57899988663 22333 11 11001122356777777765
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCC---CCccCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPK---DMDSLGLSL 352 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~---~mipLDLs~ 352 (872)
.++.++.++|++++... +++++.+...+|.++. |++. .+.|+++|+++++|.+|+.|. . ...+.-
T Consensus 168 ~~~~~d~~~l~~~i~~~-------~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g-~~~~~~- 236 (447)
T 3h7f_A 168 ATHLIDMDAVRATALEF-------RPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAG-LHPSPV- 236 (447)
T ss_dssp TTCSCCHHHHHHHHHHH-------CCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTT-SSCCST-
T ss_pred ccCCcCHHHHHHHHHhc-------CCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCC-CCCCCC-
Confidence 56779999999998642 3678888766776655 8975 567899999999999986541 0 111211
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 353 FRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
-.+|++++|+||+|++ |.| |+++.+++..+.+.+
T Consensus 237 ~~~di~~~s~sK~l~G-~~g-G~i~~~~~~~~~l~~ 270 (447)
T 3h7f_A 237 PHADVVSTTVHKTLGG-GRS-GLIVGKQQYAKAINS 270 (447)
T ss_dssp TTCSEEEEESSGGGCC-CSC-EEEEECGGGHHHHHH
T ss_pred CCCcEEEecCCcCCCC-CCe-EEEEECHHHHHHHhh
Confidence 2579999999999988 888 999998877666543
No 177
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.32 E-value=2.6e-11 Score=132.46 Aligned_cols=217 Identities=10% Similarity=-0.019 Sum_probs=138.2
Q ss_pred CceecccCCCC---CC----cHHHHHHhhhcccccHHHHHHhhccCcCcCCCc-hHHHHHHHHHHHHHhcCCC-CCCCcE
Q 002866 149 PKVCLDYCGFG---LF----SYIQTLHYWESSTFSLSEITANLSNHALYGGAE-KGTVEHDIKTRIMDHLNIP-ENEYGL 219 (872)
Q Consensus 149 ~~IYLDyAAtg---p~----p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNps-S~~~ieeARerIA~lLgA~-~dEY~V 219 (872)
+..|+|+++.. ++ ++.+++++.+ .+ .. ...++++. ......+.++++++++|++ ++ .|
T Consensus 41 g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~-------~~-~~---~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~--~v 107 (419)
T 2eo5_A 41 GNKYLDFTSGIGVNNLGWPSHPEVIKIGIE-------QM-QK---LAHAAANDFYNIPQLELAKKLVTYSPGNFQK--KV 107 (419)
T ss_dssp SCEEEESSGGGGTTTTCBSCCHHHHHHHHH-------HH-TT---SCCCSCSCSCCHHHHHHHHHHHHHSSCSSCE--EE
T ss_pred CCEEEEccCChhhhccCCCCCHHHHHHHHH-------HH-hh---CccccccccCCHHHHHHHHHHHHhCCCCcCC--EE
Confidence 46799997654 33 6888887543 11 11 11122111 1234567888999999987 54 59
Q ss_pred EEeCCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHH-----HHcC-----cEEEEEeccCCC----Cc----
Q 002866 220 VFTVSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSA-----KEKG-----AKVYSAWFKWPT----LK---- 280 (872)
Q Consensus 220 VFTsnATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~A-----krkG-----aeV~~Vpvd~p~----g~---- 280 (872)
+||+|+|+|+.+++..+ .+. |++||+.....|.......... .+.| ..+..+|++... +.
T Consensus 108 ~~~~gg~ea~~~ai~~~~~~~-~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~ 186 (419)
T 2eo5_A 108 FFSNSGTEAIEASIKVVKNTG-RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYE 186 (419)
T ss_dssp EEESSHHHHHHHHHHHHHTTS-CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTT
T ss_pred EEeCchHHHHHHHHHHHHHhh-CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccc
Confidence 99999999999988753 222 7888876433455444333221 1112 357777764310 10
Q ss_pred -------cCHHHHH-HHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--
Q 002866 281 -------LCSTDLR-KQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD-- 344 (872)
Q Consensus 281 -------Id~edLe-~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~-- 344 (872)
++.++|+ ++|.... ...++++|.+..++|.||.+.| ++. .+.|+++|+++++|.+|. .+..
T Consensus 187 ~~~~~~~~~~~~l~~~~i~~~~---~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~ 263 (419)
T 2eo5_A 187 NPSELVNRVIEFIEDYIFVNLV---PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK 263 (419)
T ss_dssp CHHHHHHHHHHHHHHTHHHHTC---CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS
T ss_pred cchhhHHHHHHHHHHHHHhhcc---CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc
Confidence 3567888 7776310 0024788989888889999887 764 467799999999999986 4421
Q ss_pred CccCCCCCCCCcEEEEcccccCCCCC-CceEEEEEeCCCcccc
Q 002866 345 MDSLGLSLFRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSL 386 (872)
Q Consensus 345 mipLDLs~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L 386 (872)
+..++.....+|++++| |.||+ + .++|+++++++++ .+
T Consensus 264 ~~~~~~~~~~~d~~t~s--K~~~~-G~~riG~~~~~~~~~-~~ 302 (419)
T 2eo5_A 264 LFAIENFNTVPDVITLA--KALGG-GIMPIGATIFRKDLD-FK 302 (419)
T ss_dssp SSGGGGGTCCCSEEEEC--GGGGT-TTSCCEEEEEEGGGC-CC
T ss_pred hhhHHhcCCCCCEEEec--ccccC-CccceEEEEEchHhh-cC
Confidence 01233334578988666 98885 5 7899999998765 44
No 178
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.32 E-value=7.3e-12 Score=135.72 Aligned_cols=174 Identities=10% Similarity=0.089 Sum_probs=126.2
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHH--HHHhhCCCC-C---------CCeEEEecccCchhHHHHHHHHHHcC
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAFK--LLAESYPFH-T---------NKKLLTMFDYESQSVNWMAQSAKEKG 266 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeALn--LVaeslpf~-~---------Gd~ILT~~DhEHnSVl~~~~~AkrkG 266 (872)
..+.|++||++++++++ .|+||+|+|+|++ +++.++... + |++|++..- .|. .+...++..|
T Consensus 72 ~~~lr~~ia~~~~~~~~--~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p-~y~---~~~~~~~~~g 145 (423)
T 3ez1_A 72 LPSARALFAGYLDVKAE--NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVP-GYD---RHFLLLQTLG 145 (423)
T ss_dssp CHHHHHHHHHHTTSCGG--GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEES-CCH---HHHHHHHHHT
T ss_pred hHHHHHHHHHHhCCChh--hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCC-CcH---HHHHHHHHcC
Confidence 45899999999999876 5999999999998 777765321 4 578776522 222 3344566679
Q ss_pred cEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEE-EeCccCcccchhcHHHH----HHH-HHCCcEEEeecccc
Q 002866 267 AKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFV-FPVQSRVTGAKYSYQWM----ALA-QQNHWHVLLDAGSL 340 (872)
Q Consensus 267 aeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa-~p~vSNvTG~i~PLe~I----~~A-re~G~~VLVDAAQ~ 340 (872)
++++.+|++.. + ++.++|+++|.. .+++++|. .+..+|.||.++|.+.+ +.| +++|+++++|.++.
T Consensus 146 ~~~~~v~~~~~-g-~d~~~l~~~l~~------~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~ 217 (423)
T 3ez1_A 146 FELLTVDMQSD-G-PDVDAVERLAGT------DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYR 217 (423)
T ss_dssp CEEEEEEEETT-E-ECHHHHHHHHHS------CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTS
T ss_pred CEEEeccCCCC-C-CCHHHHHHHHhh------CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcc
Confidence 99999999863 3 899999999852 23588885 56899999999999733 345 78999999999976
Q ss_pred CCC----C-CccCCC-------CCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 341 GPK----D-MDSLGL-------SLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 341 aG~----~-mipLDL-------s~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
... . ..+.++ ...+.++++.|++|++++ ..++|+++.++++++.+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-G~r~G~~~~~~~~~~~~~ 275 (423)
T 3ez1_A 218 VHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFA-GAGLGFVASSEDNIRWLS 275 (423)
T ss_dssp SCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCS-SSSCEEEEECHHHHHHHH
T ss_pred hhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccC-CcceEEEEeCHHHHHHHH
Confidence 311 0 011122 134567999999997554 568999998887666554
No 179
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.32 E-value=1.5e-11 Score=134.61 Aligned_cols=202 Identities=11% Similarity=0.074 Sum_probs=134.0
Q ss_pred CceecccCCCCC-CcHHHHHHhhhcccccHHHHHHhhc---cCcCcCCCchHHHHHHHHHHHHHhc----CCCCCCCcEE
Q 002866 149 PKVCLDYCGFGL-FSYIQTLHYWESSTFSLSEITANLS---NHALYGGAEKGTVEHDIKTRIMDHL----NIPENEYGLV 220 (872)
Q Consensus 149 ~~IYLDyAAtgp-~p~~VieA~~e~~~F~ls~i~~nL~---~~~~ygNpsS~~~ieeARerIA~lL----gA~~dEY~VV 220 (872)
.+|+|..+...+ .|+.+++++.+ .+ ..+. ....|+.. ....+.|++|++++ +++++ .|+
T Consensus 70 ~~i~l~~g~~~~~~~~~v~~a~~~-------~~-~~~~~~~~~~~y~~~---~g~~~lr~~ia~~~~~g~~~~~~--~i~ 136 (449)
T 3qgu_A 70 KIISLGIGDTTEPLPKYIADAMAK-------AA-AGLATREGYSGYGAE---QGQGALREAVASTFYGHAGRAAD--EIF 136 (449)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHH-------HH-HGGGGSCCCCCSTTT---TCCHHHHHHHHHHHHTTTTCCGG--GEE
T ss_pred CEEEeeCCCCCCCCCHHHHHHHHH-------HH-HhhccccCCCCCCCC---CCcHHHHHHHHHHHHcCCCCCHH--HEE
Confidence 378888876553 56777777533 12 1110 01123221 22457899999998 77765 599
Q ss_pred EeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcE----------EEEEeccCCC-CccCHHHHHHH
Q 002866 221 FTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK----------VYSAWFKWPT-LKLCSTDLRKQ 289 (872)
Q Consensus 221 FTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae----------V~~Vpvd~p~-g~Id~edLe~~ 289 (872)
||+|+|+|+.++ ..+ +++||.|++..- .|.+.. ..++..|++ +..+|++..+ ...+.+
T Consensus 137 ~t~G~~~al~~~-~~l-~~~gd~Vl~~~p-~~~~~~---~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----- 205 (449)
T 3qgu_A 137 ISDGSKCDIARI-QMM-FGSKPTVAVQDP-SYPVYV---DTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLS----- 205 (449)
T ss_dssp EESCHHHHHHHH-HHH-HCSSSCEEEEES-CCTHHH---HHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGG-----
T ss_pred EccCHHHHHHHH-HHH-hCCCCEEEEcCC-CChhHH---HHHHHcCCcccccccccceeEEEecccccCCcCChh-----
Confidence 999999999998 555 468999876532 233333 344556877 8888886431 122211
Q ss_pred HhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccC----CCCCccCCCCCC----CCcE
Q 002866 290 ISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLG----PKDMDSLGLSLF----RPDF 357 (872)
Q Consensus 290 I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~a----G~~mipLDLs~l----~~DF 357 (872)
. .+++++|.++..+|.||.++|.+ +++.|+++|+++++|.++.. +. .+..+..+ ++++
T Consensus 206 --~------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~i 275 (449)
T 3qgu_A 206 --K------AKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPD--CPKTIYEIPGADEVAI 275 (449)
T ss_dssp --G------CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTT--SCSSGGGSTTGGGTEE
T ss_pred --H------cCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCC--CCCCHhhccCCCCcEE
Confidence 1 13588999999999999999964 34567899999999999865 32 23333332 5679
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCcc
Q 002866 358 IITSFYRVFGFDPTGFGCLLIKKSVMG 384 (872)
Q Consensus 358 lv~S~HK~fG~~PtGvG~LyVRk~~i~ 384 (872)
++.|++|+||.+..++|+++++++.++
T Consensus 276 ~~~s~sK~~g~~G~r~G~~~~~~~~~~ 302 (449)
T 3qgu_A 276 ETCSFSKYAGFTGVRLGWTVVPKALKY 302 (449)
T ss_dssp EEEECSGGGTCTTCCCEEEECCTTCBC
T ss_pred EEecchhhcCCccceeEEEecCHHHHh
Confidence 999999999831234899998877654
No 180
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.30 E-value=1.3e-11 Score=132.61 Aligned_cols=203 Identities=10% Similarity=0.053 Sum_probs=129.8
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+..|+|.++. ++.++.+++++.+ .+ .... ...+.-.....++.++++++++|. + .|+||
T Consensus 39 g~~~ld~~~~~~~~~lg~~~~~v~~a~~~-------~~-~~~~---~~~~~~~~~~~~~l~~~la~~~g~--~--~v~~~ 103 (397)
T 2ord_A 39 GNAYLDFTSGIAVNVLGHSHPRLVEAIKD-------QA-EKLI---HCSNLFWNRPQMELAELLSKNTFG--G--KVFFA 103 (397)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHH-------HH-HHCS---CCCTTSEEHHHHHHHHHHHHTTTS--C--EEEEE
T ss_pred CCEEEECCccccccccCCCCHHHHHHHHH-------HH-Hhcc---cCccccCCHHHHHHHHHHHHhcCC--C--eEEEe
Confidence 4678998754 3346778777533 12 1111 111101135678899999999984 3 49999
Q ss_pred CCHHHHHHHHHhhCC-C----CC-CCeEEEecccCchhHHHHHHHHHHcCcE------------EEEEeccCCCCccCHH
Q 002866 223 VSRGSAFKLLAESYP-F----HT-NKKLLTMFDYESQSVNWMAQSAKEKGAK------------VYSAWFKWPTLKLCST 284 (872)
Q Consensus 223 snATeALnLVaeslp-f----~~-Gd~ILT~~DhEHnSVl~~~~~AkrkGae------------V~~Vpvd~p~g~Id~e 284 (872)
+|+|+|+.+++..+. + ++ +++|++.....|.+...+.. ..|.+ +..+|.+ +.+
T Consensus 104 ~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~---~~g~~~~~~~~~p~~~~~~~~~~~------d~~ 174 (397)
T 2ord_A 104 NTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLT---ATGQPKYQKPFEPLVPGFEYFEFN------NVE 174 (397)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHH---HSBCHHHHGGGCSCCTTEEEECTT------CHH
T ss_pred CCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhh---ccCChhhccccCCCCCCeeEecCC------CHH
Confidence 999999999887752 1 03 35676553333454543322 23433 5555542 678
Q ss_pred HHHHHHhhhhccCCCCCceEEEEeCccCcccc-h---hcHH-HHHHHHHCCcEEEeecccc-CCCCCccCCCCCC--CCc
Q 002866 285 DLRKQISSKKRRKKDSAAGLFVFPVQSRVTGA-K---YSYQ-WMALAQQNHWHVLLDAGSL-GPKDMDSLGLSLF--RPD 356 (872)
Q Consensus 285 dLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~-i---~PLe-~I~~Are~G~~VLVDAAQ~-aG~~mipLDLs~l--~~D 356 (872)
+|+++|.. ++++|.+...+|.||. . .+++ +++.|+++|+++++|.++. .+..-.++.+..+ .+|
T Consensus 175 ~l~~~l~~--------~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d 246 (397)
T 2ord_A 175 DLRRKMSE--------DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPD 246 (397)
T ss_dssp HHHHHCCT--------TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCS
T ss_pred HHHHHhhc--------CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCC
Confidence 88877742 5899999999999999 4 4555 4467899999999999986 2210002222222 389
Q ss_pred EEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 357 FIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 357 Flv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++ +++|+||+ +.++|+++++++.+ .+.
T Consensus 247 ~~--s~sK~~~~-G~r~G~~~~~~~~~-~l~ 273 (397)
T 2ord_A 247 VL--TTAKGLGG-GVPIGAVIVNERAN-VLE 273 (397)
T ss_dssp EE--EECGGGGT-TSCCEEEEECSTTC-CCC
T ss_pred ee--eeccccCC-CcCeEEEEEchHhc-ccC
Confidence 77 55799985 55799999998865 443
No 181
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.30 E-value=2.5e-11 Score=133.75 Aligned_cols=154 Identities=8% Similarity=0.032 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHH-HHHcCcEEEEEeccC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQS-AKEKGAKVYSAWFKW 276 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~-AkrkGaeV~~Vpvd~ 276 (872)
...+.+++||++.|++ .+++++++++|+.++ ..+ .++|++|++.....+.....+... +++.|+++..++.+
T Consensus 68 ~~~~l~~~la~l~g~~----~~~~~~sG~~Ai~~~-~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~- 140 (400)
T 3nmy_A 68 TRFAYERCVAALEGGT----RAFAFASGMAATSTV-MEL-LDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLT- 140 (400)
T ss_dssp HHHHHHHHHHHHHTCS----EEEEESSHHHHHHHH-HTT-SCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTT-
T ss_pred HHHHHHHHHHHHhCCC----CEEEecCHHHHHHHH-HHH-cCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCC-
Confidence 3467889999999985 266667779999985 343 478999887644223333444444 66779999988764
Q ss_pred CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCCCCCC
Q 002866 277 PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRP 355 (872)
Q Consensus 277 p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs~l~~ 355 (872)
+.++|+++|.. +|++|.+...+|.+|.+.|++. .+.|+++|+++++|.++..|....+++ +++
T Consensus 141 -----d~~~l~~~i~~--------~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~---~g~ 204 (400)
T 3nmy_A 141 -----DPAAFKAAIRA--------DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLS---LGA 204 (400)
T ss_dssp -----SHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGG---GTC
T ss_pred -----CHHHHHHHhcc--------CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhh---cCC
Confidence 57888877742 5899999999999999999985 567899999999999987543112333 589
Q ss_pred cEEEEcccccCCCCC-CceEE
Q 002866 356 DFIITSFYRVFGFDP-TGFGC 375 (872)
Q Consensus 356 DFlv~S~HK~fG~~P-tGvG~ 375 (872)
|+++.|++|++|+ | ..+|.
T Consensus 205 div~~S~sK~l~g-~g~~~gG 224 (400)
T 3nmy_A 205 DLVVHSATKYLNG-HSDMVGG 224 (400)
T ss_dssp SEEEEETTTTTTC-SSSCCCE
T ss_pred cEEEecCccccCC-CCCccee
Confidence 9999999999986 4 23544
No 182
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.28 E-value=2.6e-11 Score=131.05 Aligned_cols=214 Identities=14% Similarity=0.077 Sum_probs=138.9
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc-CCC-CC-CCcEEEeCCHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL-NIP-EN-EYGLVFTVSRG 226 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL-gA~-~d-EY~VVFTsnAT 226 (872)
-.|+|+.+..+.++.+.+++.+ . ..... ..|+.+. ...+.|+.|++++ +.. ++ ...|+||+|+|
T Consensus 45 g~~~~~~~~~~~~~~v~~a~~~---~----~~~~~---~~Y~~~~---g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~ 111 (413)
T 3t18_A 45 GTLLDDKGKIIALPSVYDRLDE---M----DRSHI---ASYAPIE---GEKDYRKIVIDTLFGPYKPEGYISAIATPGGT 111 (413)
T ss_dssp CCCBCTTSCBCCCHHHHHHHHH---S----CHHHH---HSCCCTT---CCHHHHHHHHHHHHGGGCCSSEEEEEEESHHH
T ss_pred cCccCCCCCcCChHHHHHHHHh---c----Ccccc---cCcCCCC---CCHHHHHHHHHHHhcccCccccCcEEEcCccH
Confidence 4588888888888888776432 1 00011 1233221 1246788888865 321 22 12599999999
Q ss_pred HHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCce-EE
Q 002866 227 SAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAG-LF 305 (872)
Q Consensus 227 eALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~-LV 305 (872)
+|+.+++.++ .++||+|++..- .+.. ....++..|++++.+|+...++.++.++|+++|.... .++++ ++
T Consensus 112 ~al~~~~~~~-~~~gd~Vl~~~p-~~~~---~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~----~~~~~~~v 182 (413)
T 3t18_A 112 GAIRSAIFSY-LDEGDPLICHDY-YWAP---YRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGI----RDSDRIAS 182 (413)
T ss_dssp HHHHHHHHHH-CCSSCEEEEESS-CCTH---HHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHH----HHCSEEEE
T ss_pred HHHHHHHHHh-cCCCCEEEECCC-Cccc---HHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHh----hcCCCEEE
Confidence 9999999987 578999887632 2232 3344566799999999854456789999999886421 01355 77
Q ss_pred EEeCc-cCcccchhcHHHH----HHHH------HCCcEEEeecccc-CCCC---CccC--CCCCCCCc---EEEEccccc
Q 002866 306 VFPVQ-SRVTGAKYSYQWM----ALAQ------QNHWHVLLDAGSL-GPKD---MDSL--GLSLFRPD---FIITSFYRV 365 (872)
Q Consensus 306 a~p~v-SNvTG~i~PLe~I----~~Ar------e~G~~VLVDAAQ~-aG~~---mipL--DLs~l~~D---Flv~S~HK~ 365 (872)
.++.. +|.||.++|.+.+ +.|+ ++|+++++|.++. .+.+ ..++ ....++.| +++.|++|.
T Consensus 183 i~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 262 (413)
T 3t18_A 183 LINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKS 262 (413)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHH
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCcc
Confidence 78776 9999999999743 3445 8999999999942 1110 0011 11223344 777899999
Q ss_pred CCCCCCc--eEEEEE---eCCCccccc
Q 002866 366 FGFDPTG--FGCLLI---KKSVMGSLQ 387 (872)
Q Consensus 366 fG~~PtG--vG~LyV---Rk~~i~~L~ 387 (872)
||. .| +|++++ .+++++.+.
T Consensus 263 ~~~--~G~riG~~~~~~~~~~~~~~~~ 287 (413)
T 3t18_A 263 HTA--YGLRSGAAVGISSSKEIIEEFE 287 (413)
T ss_dssp TTC--GGGCCEEEEEEESCHHHHHHHH
T ss_pred CCC--cCcCcEEEEEecCCHHHHHHHH
Confidence 993 47 899988 666665553
No 183
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.26 E-value=6.1e-11 Score=128.11 Aligned_cols=176 Identities=11% Similarity=0.101 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHh---hCCCCCCCeEEEecccCchhHHHHHHHHHHcCc------
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAE---SYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGA------ 267 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVae---slpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGa------ 267 (872)
....+.|++|+++++.+.. ..|+||+|+|+|+.+++. .+. .+| +|++.....|.....+... .|.
T Consensus 84 ~~~~~l~~~la~~~~~~~~-~~v~~~~g~~~a~~~~~~~a~~~~-~~~-~vi~~~p~y~~~~~~~~~~---~g~~~~~~~ 157 (426)
T 1sff_A 84 EPYLELCEIMNQKVPGDFA-KKTLLVTTGSEAVENAVKIARAAT-KRS-GTIAFSGAYHGRTHYTLAL---TGKVNPYSA 157 (426)
T ss_dssp HHHHHHHHHHHHHSSCSSC-EEEEEESSHHHHHHHHHHHHHHHH-TCC-EEEEETTCCCCSSHHHHHH---SSCCTTTTT
T ss_pred HHHHHHHHHHHHhCCcccc-cEEEEeCchHHHHHHHHHHHHHhh-CCC-eEEEECCCcCCCchHhhhh---cCCcccccc
Confidence 5677899999999943321 269999999999999877 442 344 6665533335545433322 232
Q ss_pred -------EEEEEeccC----CCCccCHHHHHHHHhhhhccCCCCCceEEEEeC-ccCcccchhc----HH-HHHHHHHCC
Q 002866 268 -------KVYSAWFKW----PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPV-QSRVTGAKYS----YQ-WMALAQQNH 330 (872)
Q Consensus 268 -------eV~~Vpvd~----p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~-vSNvTG~i~P----Le-~I~~Are~G 330 (872)
.+..+|++. ..+.++.++|+++|.... ...++++|.+.. .+| ||.+.| ++ +++.|+++|
T Consensus 158 ~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~ 233 (426)
T 1sff_A 158 GMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA---APEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHG 233 (426)
T ss_dssp TSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC---CGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHT
T ss_pred ccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc---CCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcC
Confidence 266677753 122367888888886310 012477888854 566 997777 76 456789999
Q ss_pred cEEEeecccc-CCCC--CccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCccccc
Q 002866 331 WHVLLDAGSL-GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 331 ~~VLVDAAQ~-aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~~L~ 387 (872)
+++++|.++. .+.. ...++.....+|++ |+.|+|| | | +|++++++++++.+.
T Consensus 234 ~~li~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~--~-GlriG~~~~~~~~~~~l~ 290 (426)
T 1sff_A 234 IMLIADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIA--G-GFPLAGVTGRAEVMDAVA 290 (426)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGG--T-SSCCEEEEEEHHHHTTSC
T ss_pred CEEEEechhhccCcccchhhhhhcCCCCCEE--EEccccc--C-CCceEEEEEcHHHHhhhc
Confidence 9999999987 3210 01233334458877 5569998 5 7 699999987766554
No 184
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.26 E-value=3.4e-11 Score=130.25 Aligned_cols=216 Identities=10% Similarity=0.037 Sum_probs=138.7
Q ss_pred ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCC--CCC-CCcEEEeCCHH
Q 002866 150 KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNI--PEN-EYGLVFTVSRG 226 (872)
Q Consensus 150 ~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA--~~d-EY~VVFTsnAT 226 (872)
-.|+|+.+..+.++.+.+++.+ + ..... ..|+.+. -..+.|++|++++.. .++ ...|++|+|+|
T Consensus 46 g~~~~~~~~~~~~~~v~~a~~~---~----~~~~~---~~y~~~~---g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~ 112 (418)
T 3rq1_A 46 GAIHDEEGNLVFLKTVKEEYLS---L----SDSEH---VGYAPIA---GIPDFLCAAEKECFGNFRPEGHIRSIATAGGT 112 (418)
T ss_dssp SCCBCTTSCBCCCHHHHHHHHT---C----CHHHH---HSCCCTT---CCHHHHHHHHHHHHGGGCCSSEEEEEEESHHH
T ss_pred CcccCCCCCccccHHHHHHHHH---h----ccccc---CCCCCCC---ChHHHHHHHHHHHhcccCccccccEEECCchH
Confidence 4567777777788888776432 1 00011 1233221 124678888886621 122 11599999999
Q ss_pred HHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCce-EE
Q 002866 227 SAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAG-LF 305 (872)
Q Consensus 227 eALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~-LV 305 (872)
+|+.+++.++ .++||+|++..- .+. .+...++..|++++.+|++..++.++.++|++++..... ++++ ++
T Consensus 113 ~al~~~~~~l-~~~gd~Vl~~~p-~~~---~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~----~~~~~~v 183 (418)
T 3rq1_A 113 GGIHHLIHNY-TEPGDEVLTADW-YWG---AYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAA----KQTNVVV 183 (418)
T ss_dssp HHHHHHHHHH-SCTTCEEEEESS-CCT---HHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHH----HCSEEEE
T ss_pred HHHHHHHHHh-cCCCCEEEECCC-Cch---hHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhc----cCCCEEE
Confidence 9999999987 578999887632 222 233456778999999998655567899999998864210 1244 88
Q ss_pred EEeCc-cCcccchhcHHHH----HHHH------HCCcEEEeecccc-CCCCC---cc--CCCCCCCCc---EEEEccccc
Q 002866 306 VFPVQ-SRVTGAKYSYQWM----ALAQ------QNHWHVLLDAGSL-GPKDM---DS--LGLSLFRPD---FIITSFYRV 365 (872)
Q Consensus 306 a~p~v-SNvTG~i~PLe~I----~~Ar------e~G~~VLVDAAQ~-aG~~m---ip--LDLs~l~~D---Flv~S~HK~ 365 (872)
.++.. +|.||.++|.+.+ +.|+ ++|+++++|.++. ...+- .+ -.......| +++.|++|.
T Consensus 184 i~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 263 (418)
T 3rq1_A 184 IFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKG 263 (418)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTT
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCC
Confidence 88877 8999999998743 3345 7999999999953 11100 01 112223445 788899999
Q ss_pred CCCCCCceEEEEE---eCCCccccc
Q 002866 366 FGFDPTGFGCLLI---KKSVMGSLQ 387 (872)
Q Consensus 366 fG~~PtGvG~LyV---Rk~~i~~L~ 387 (872)
||.+-..+|++++ .+++++.+.
T Consensus 264 ~~~~G~r~G~~~~~~~~~~~~~~~~ 288 (418)
T 3rq1_A 264 FTMYGQRVGAMIGISDDEEIADEFF 288 (418)
T ss_dssp TTCCSSCCEEEEEEESSHHHHHHHH
T ss_pred CcCcCCcceEEEEEeCCHHHHHHHH
Confidence 9841123788887 666655543
No 185
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.24 E-value=7e-11 Score=128.61 Aligned_cols=205 Identities=14% Similarity=0.101 Sum_probs=130.5
Q ss_pred CceecccCCCC-CCcHHHHHHhhhcccccHHHHHHhhcc-C--cCcCCCchHHHHHHHHHHHHHhc----CCCCCCCcEE
Q 002866 149 PKVCLDYCGFG-LFSYIQTLHYWESSTFSLSEITANLSN-H--ALYGGAEKGTVEHDIKTRIMDHL----NIPENEYGLV 220 (872)
Q Consensus 149 ~~IYLDyAAtg-p~p~~VieA~~e~~~F~ls~i~~nL~~-~--~~ygNpsS~~~ieeARerIA~lL----gA~~dEY~VV 220 (872)
++|+|..+... +.|+.+++++.+ .+. .+.. + ..|+.+ ....+.|++||+++ +++++ .|+
T Consensus 57 ~~i~l~~~~~~~~~~~~v~~a~~~-------~~~-~~~~~~~~~~y~~~---~g~~~l~~~ia~~~~~~~~~~~~--~i~ 123 (432)
T 3ei9_A 57 QVISLGIGDTTEPIPEVITSAMAK-------KAH-ELSTIEGYSGYGAE---QGAKPLRAAIAKTFYGGLGIGDD--DVF 123 (432)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHH-------HHH-HTTSTTTCCCCCCT---TCCHHHHHHHHHHHHTTTTCCGG--GEE
T ss_pred CeEEccCCCCCCCCCHHHHHHHHH-------HHh-cccccCCccCCCCC---CCCHHHHHHHHHHHHccCCCCcc--eEE
Confidence 47889888666 467788887543 121 1110 1 123221 12357888999986 77765 599
Q ss_pred EeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcC---------cEEEEEeccCCC-CccCHHHHHHHH
Q 002866 221 FTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKG---------AKVYSAWFKWPT-LKLCSTDLRKQI 290 (872)
Q Consensus 221 FTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkG---------aeV~~Vpvd~p~-g~Id~edLe~~I 290 (872)
||+|+|+++.++. .+ +++||.|++.. ..|.+.....+.+...| .++..++++... ...+ +
T Consensus 124 ~t~G~~~al~~l~-~l-~~~gd~Vl~~~-p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l---- 193 (432)
T 3ei9_A 124 VSDGAKCDISRLQ-VM-FGSNVTIAVQD-PSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPD---L---- 193 (432)
T ss_dssp EESCHHHHHHHHH-HH-HCTTCCEEEEE-SCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCC---G----
T ss_pred ECCChHHHHHHHH-HH-cCCCCEEEEeC-CCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCC---h----
Confidence 9999999999864 33 36899987653 23455554444443333 367777775421 1122 1
Q ss_pred hhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccccCCC-CCccCCCCC----CCCcEEEEc
Q 002866 291 SSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSLGPK-DMDSLGLSL----FRPDFIITS 361 (872)
Q Consensus 291 ~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~aG~-~mipLDLs~----l~~DFlv~S 361 (872)
.. .+++++|.++..+|.||.++|.+. ++.|+++|+++++|.++.... +..+..+.. .+.++++.|
T Consensus 194 ~~------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S 267 (432)
T 3ei9_A 194 ST------VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETAS 267 (432)
T ss_dssp GG------CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEE
T ss_pred hh------CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEec
Confidence 11 235889999999999999999753 345789999999999986221 001223322 246799999
Q ss_pred ccccCCCCCCceEEEEEeCCC
Q 002866 362 FYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 362 ~HK~fG~~PtGvG~LyVRk~~ 382 (872)
++|.||.+...+|+++++++.
T Consensus 268 ~SK~~g~~G~r~G~~~~~~~~ 288 (432)
T 3ei9_A 268 FSNYAGFTGVRLGWTVIPKKL 288 (432)
T ss_dssp SHHHHCTTTTCCEEEECCTTC
T ss_pred chhccCCcccceEEEEEChHH
Confidence 999998312238999887765
No 186
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.24 E-value=6.9e-12 Score=134.87 Aligned_cols=175 Identities=13% Similarity=0.076 Sum_probs=112.0
Q ss_pred HHHHHHHHHHhc------CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCC-----eEEEecccCchhHHHHHHHH---HH
Q 002866 199 EHDIKTRIMDHL------NIPENEYGLVFTVSRGSAFKLLAESYPFHTNK-----KLLTMFDYESQSVNWMAQSA---KE 264 (872)
Q Consensus 199 ieeARerIA~lL------gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd-----~ILT~~DhEHnSVl~~~~~A---kr 264 (872)
+.+.|++||+++ +++++ .|+||+|+|+|+++++.++ .++|+ +|++..+-.+.......... ..
T Consensus 77 ~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~t~al~~~~~~l-~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~ 153 (417)
T 3g7q_A 77 KTALLNALAVLLRETLGWDIEPQ--NIALTNGSQSAFFYLFNLF-AGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVS 153 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCGG--GEEEESCHHHHHHHHHHHH-SBC----CCBEEEESSCCCHHHHHC-----CCEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCcc--cEEEeCCcHHHHHHHHHHH-cCCCccCCcceEEEeCCCccccchhhccchhhhcc
Confidence 457899999998 56665 5999999999999999987 35665 77764222222222111111 11
Q ss_pred cCcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH---H-HHHHHHHCCcEEEeecccc
Q 002866 265 KGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSL 340 (872)
Q Consensus 265 kGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~ 340 (872)
.+..+..++.+.....++.++|+ +. +++++|.++..+|.||+++|. + +++.|+++|+++++|.++.
T Consensus 154 ~~~~~~~~~~~~~~~~~d~~~l~--~~--------~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~ 223 (417)
T 3g7q_A 154 ARPNIELLPEGQFKYHVDFEHLH--IG--------EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYG 223 (417)
T ss_dssp CCCEEEEEGGGEEEEECCGGGCC--CC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred ccCcccccCCcccccccCHHHhc--cc--------cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCc
Confidence 24455544433112346777775 32 358999999999999999994 4 3456899999999999986
Q ss_pred CCCCC---ccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 341 GPKDM---DSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 341 aG~~m---ipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
.+... ..+.....+.++++.|++|+ +.+..++|+++.++++++.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~ 272 (417)
T 3g7q_A 224 VPFPGIIFSEARPLWNPNIILCMSLSKL-GLPGSRCGIIIANDKTITAIA 272 (417)
T ss_dssp TTTTCCBCSCCCCCCCTTEEEEEESGGG-TCTTSCCEEEECCHHHHHHHH
T ss_pred cccccccccccccCCCCCEEEEEechhc-cCCCcceEEEEeCHHHHHHHH
Confidence 42200 11112234678999999995 531234888887776665543
No 187
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.24 E-value=1.2e-10 Score=125.88 Aligned_cols=163 Identities=16% Similarity=0.162 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCC
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWP 277 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p 277 (872)
..+++++.+++++|++. .+++.++|+|+..++.++ .++||.|++. +..|.++.. .++..|+++..++.
T Consensus 105 ~~~~l~~~la~~~g~~~----~i~~~sGt~a~~~~l~~~-~~~gd~Vl~~-~~~~~~~~~---~~~~~g~~~~~~~~--- 172 (409)
T 3kki_A 105 DKPMIEKRLAKFTGFDE----CLLSQSGWNANVGLLQTI-CQPNTNVYID-FFAHMSLWE---GARYANAQAHPFMH--- 172 (409)
T ss_dssp TSCHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHH-CCTTCEEEEE-TTSCHHHHH---HHHHTTCEEEEECT---
T ss_pred HHHHHHHHHHHHhCCCe----EEEecchHHHHHHHHHHh-cCCCCEEEEC-CCcCHHHHH---HHHHcCCeEEEecC---
Confidence 44678999999999853 344555579988888776 4789998876 345665543 33456888876643
Q ss_pred CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCc--------cC
Q 002866 278 TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMD--------SL 348 (872)
Q Consensus 278 ~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mi--------pL 348 (872)
.+.++|+++|... ++++|.++..+|.||.+.|++ +++.|+++|+++++|.++..+. .. .+
T Consensus 173 ---~d~~~le~~l~~~-------~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~-~g~~g~~~~~~~ 241 (409)
T 3kki_A 173 ---NNCDHLRMLIQRH-------GPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGT-HGPNGAGLLAEL 241 (409)
T ss_dssp ---TCHHHHHHHHHHH-------CSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTT-SSGGGCCHHHHH
T ss_pred ---CCHHHHHHHHHhc-------CCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccc-cCCCCCcchhhc
Confidence 4789999998752 368999999999999999997 5678899999999999997653 00 12
Q ss_pred CCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 349 GLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
++. .++|+++.|++|+||. + .|+++.+++.++.+.
T Consensus 242 ~~~-~~~di~~~s~sK~~~~-~--gg~v~~~~~~~~~~~ 276 (409)
T 3kki_A 242 GLT-REVHFMTASLAKTFAY-R--AGAIWCNNEVNRCVP 276 (409)
T ss_dssp TCG-GGCSEEEEESSSTTCS-S--CEEEEESSSGGGTHH
T ss_pred CCC-CCCCEEEeecchhhCC-C--ceEEEECHHHHHHHH
Confidence 221 2689999999999995 3 488888887765543
No 188
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.22 E-value=2.2e-11 Score=132.93 Aligned_cols=172 Identities=13% Similarity=0.094 Sum_probs=122.1
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEeCCHHHHH--HHHHhhCC--CCCC---------CeEEEecccCchhHHHHHHHHHHc
Q 002866 199 EHDIKTRIMDHLNIPENEYGLVFTVSRGSAF--KLLAESYP--FHTN---------KKLLTMFDYESQSVNWMAQSAKEK 265 (872)
Q Consensus 199 ieeARerIA~lLgA~~dEY~VVFTsnATeAL--nLVaeslp--f~~G---------d~ILT~~DhEHnSVl~~~~~Akrk 265 (872)
..+.|+.||++++++++ .|+||+|+|+|+ ++++..+. +.+| ++|++.. ++...+...++..
T Consensus 78 ~~~lr~~ia~~~~~~~~--~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~----p~y~~~~~~~~~~ 151 (422)
T 3d6k_A 78 IADIRELWAEALGLPAD--LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPV----PGYDRHFTITEHF 151 (422)
T ss_dssp CHHHHHHHHHHHTCCGG--GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEE----SCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCChh--HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeC----CccHHHHHHHHHc
Confidence 35799999999999876 599999999997 77777653 2223 3566542 1222334556667
Q ss_pred CcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEE-EeCccCcccchhcHHHH----HHHH-HCCcEEEeeccc
Q 002866 266 GAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFV-FPVQSRVTGAKYSYQWM----ALAQ-QNHWHVLLDAGS 339 (872)
Q Consensus 266 GaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa-~p~vSNvTG~i~PLe~I----~~Ar-e~G~~VLVDAAQ 339 (872)
|+++..+|++. ++ ++.++|++++.. .++++|. ++..+|.||.++|.+.+ ..|+ ++|+++++|.++
T Consensus 152 g~~~~~v~~~~-~g-~d~~~l~~~l~~-------~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y 222 (422)
T 3d6k_A 152 GFEMINVPMTD-EG-PDMGVVRELVKD-------PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAY 222 (422)
T ss_dssp TCEEEEEEEET-TE-ECHHHHHHHHTS-------TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTT
T ss_pred CCEEEecCCCC-CC-CCHHHHHHHHhc-------CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCc
Confidence 99999999976 34 899999988853 1477777 79999999999999733 3456 899999999998
Q ss_pred cC---CC---CCccC-C----CCCCCCcEEEEcccccCCCCC-CceEEEEEeCCCccccc
Q 002866 340 LG---PK---DMDSL-G----LSLFRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 340 ~a---G~---~mipL-D----Ls~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~ 387 (872)
.. .. ...++ + +...+.++++.|++|+ +. | ..+|++++++++++.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~-~GlriG~~~~~~~l~~~l~ 280 (422)
T 3d6k_A 223 ALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH-AGSGVSFFASSKENIEWYA 280 (422)
T ss_dssp TTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC-TTSSCEEEECCHHHHHHHH
T ss_pred cccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC-cccceEEEEeCHHHHHHHH
Confidence 52 11 00111 1 1234678999999998 44 4 23899998877665554
No 189
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.19 E-value=1.5e-10 Score=130.61 Aligned_cols=177 Identities=12% Similarity=0.136 Sum_probs=123.0
Q ss_pred HHHHHHHHHhcC------CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 200 HDIKTRIMDHLN------IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 200 eeARerIA~lLg------A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
.+.|+.||++++ ++++ .|++|+|+|+|+.+++..+.+.+|+.|++..- .|.. +...++..|++++.++
T Consensus 137 ~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p-~y~~---~~~~~~~~g~~~~~~~ 210 (500)
T 3tcm_A 137 HGLRDAIASGIASRDGFPANAD--DIFLTDGASPGVHLMMQLLIRNEKDGILVPIP-QYPL---YSASIALHGGALVPYY 210 (500)
T ss_dssp HHHHHHHHHHHHHHHSSCCCGG--GEEEESSSHHHHHHHHHHHCCSTTEEEEEEES-CCTH---HHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHhhcCCCCCcc--cEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCC-CcHh---HHHHHHHcCCEEEEEe
Confidence 467888887764 5555 59999999999999999986578999876532 2333 3344566799999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeeccccCCC---CC
Q 002866 274 FKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSLGPK---DM 345 (872)
Q Consensus 274 vd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~aG~---~m 345 (872)
++.. +..++.++|+++|..... ...++++|++...+|.||.++|.+. ++.|+++|+++++|.+..... ..
T Consensus 211 ~~~~~~~~~d~~~l~~~l~~~~~--~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~ 288 (500)
T 3tcm_A 211 LNESTGWGLETSDVKKQLEDARS--RGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNK 288 (500)
T ss_dssp CBTTTTSBCCHHHHHHHHHHHHH--TTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTC
T ss_pred cccccCCCCCHHHHHHHHHHHHh--cCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCC
Confidence 8764 236899999999975321 2235889999999999999999853 345799999999999964311 00
Q ss_pred ccCCCC---------CCCCc-EEEEcccccC-CCCCCc--eEEEEE---eCCCcccc
Q 002866 346 DSLGLS---------LFRPD-FIITSFYRVF-GFDPTG--FGCLLI---KKSVMGSL 386 (872)
Q Consensus 346 ipLDLs---------~l~~D-Flv~S~HK~f-G~~PtG--vG~LyV---Rk~~i~~L 386 (872)
....+. .-.++ +++.|++|.| | +.| +|++++ .+++++.+
T Consensus 289 ~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~G~R~G~~~~~~~~~~~~~~l 343 (500)
T 3tcm_A 289 KFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYG--ECGKRGGYFEITGFSAPVREQI 343 (500)
T ss_dssp CCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTC--CGGGCCEEEEEESCCTTHHHHH
T ss_pred CCCcHHHHHHHhccccCCeEEEEEecCCccCCC--CCccceEEEEEeCCCHHHHHHH
Confidence 011111 11222 5567999988 6 345 688887 55555444
No 190
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.18 E-value=1.5e-11 Score=129.58 Aligned_cols=172 Identities=13% Similarity=0.104 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCe-EEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKK-LLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~-ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
....++|+++++++|++. .+|++|+|+|+.+++..+. .+|++ +++.....|.........+...|+++..++.+
T Consensus 48 ~~~~~l~~~la~~~~~~~----~i~~~~g~~a~~~a~~~~~-~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (359)
T 3pj0_A 48 AVIEDFETKIAKILGKQS----AVFFPSGTMAQQIALRIWA-DRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTA 122 (359)
T ss_dssp HHHHHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHHH-HHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCT
T ss_pred HHHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHHH-hcCCCcEEEEeccceeeehhcchHHHhcCceEEecCCc
Confidence 356789999999999853 4677899999998887753 35665 44332323333322112223459999888763
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcc-cchhcHHH----HHHHHHCCcEEEeeccccCCC----CCc
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVT-GAKYSYQW----MALAQQNHWHVLLDAGSLGPK----DMD 346 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvT-G~i~PLe~----I~~Are~G~~VLVDAAQ~aG~----~mi 346 (872)
++.++.++|+++ . +++++|.+...+|.+ |.++|++. ++.|+++|+++++|+++..+. ...
T Consensus 123 --~~~~d~~~l~~~-~--------~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~ 191 (359)
T 3pj0_A 123 --NQLLTIDDIKSL-R--------EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKS 191 (359)
T ss_dssp --TSCCCHHHHHTC-S--------SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCC
T ss_pred --CCCcCHHHHHhc-c--------CCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCC
Confidence 567898888765 2 358899998887877 79999864 456799999999999875331 000
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
..++. ..+|.+++|+||+|++ |.| |+++.++++++.+.
T Consensus 192 ~~~~~-~~~d~~~~s~sK~~~~-~~g-g~~~~~~~l~~~~~ 229 (359)
T 3pj0_A 192 AEEIC-ALFDSVYVSFYKGIGG-IAG-AILAGNDDFVQEAK 229 (359)
T ss_dssp HHHHH-TTCSEEEEESSSTTCC-SSC-EEEEECHHHHHHHH
T ss_pred HHHhh-ccCCEEEEeccccCCC-cce-EEEECCHHHHHHHH
Confidence 11121 3679999999999887 777 88888877766554
No 191
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.17 E-value=8.3e-11 Score=134.09 Aligned_cols=167 Identities=10% Similarity=0.042 Sum_probs=119.8
Q ss_pred HHHHHHHHHhc----C--CCCC-CCcEEEeCCHHHHHHHHHhhC----CCCCCCeEEEecccCchhHHHHHHHHHHcCcE
Q 002866 200 HDIKTRIMDHL----N--IPEN-EYGLVFTVSRGSAFKLLAESY----PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAK 268 (872)
Q Consensus 200 eeARerIA~lL----g--A~~d-EY~VVFTsnATeALnLVaesl----pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae 268 (872)
.+.|+.|++++ + .... +..|+||+|+|+|+++++.++ -.++||+|++.. ..|.++. ..++..|++
T Consensus 141 ~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~-p~~~~~~---~~~~~~g~~ 216 (533)
T 3f6t_A 141 VNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINE-PIFTPYL---RIPELKDYE 216 (533)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEES-SCCHHHH---TSGGGGGSE
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcC-CCcHHHH---HHHHHcCCe
Confidence 45677777776 2 2221 126999999999999999873 367899988763 3444443 334557899
Q ss_pred EEEEeccC---CCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHH-HCCcEEEeecccc
Q 002866 269 VYSAWFKW---PTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQ-QNHWHVLLDAGSL 340 (872)
Q Consensus 269 V~~Vpvd~---p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Ar-e~G~~VLVDAAQ~ 340 (872)
+..++++. .+..++.++|++++. +++++|.+...+|+||.++|.+. ++.|+ ++|+++++|.++.
T Consensus 217 ~~~v~~~~~~~~~~~~d~~~l~~~l~--------~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~ 288 (533)
T 3f6t_A 217 LVEVDLHSYEKNDWEIEPNEIEKLKD--------PSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYG 288 (533)
T ss_dssp EEEECCCEETTTTSEECHHHHHHHSC--------TTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTG
T ss_pred EEEEEecCCcccCCCCCHHHHHHHhC--------CCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCcc
Confidence 99998862 346789999988774 25899999999999999999962 34566 5899999999965
Q ss_pred CCCCCccCCCCC--CCCcEEEEcccccCCCCCCc--eEEEEEeCC
Q 002866 341 GPKDMDSLGLSL--FRPDFIITSFYRVFGFDPTG--FGCLLIKKS 381 (872)
Q Consensus 341 aG~~mipLDLs~--l~~DFlv~S~HK~fG~~PtG--vG~LyVRk~ 381 (872)
.-.. ....+.. .+.++++.|++|.|| +.| +|+++++++
T Consensus 289 ~~~~-~~~~~~~~~~~~~i~~~S~SK~~g--~~G~RiG~l~~~~~ 330 (533)
T 3f6t_A 289 AFVP-NFKSIYSVVPYNTMLVYSYSKLFG--CTGWRLGVIALNEK 330 (533)
T ss_dssp GGST-TCCCHHHHSGGGEEEEEESHHHHT--CGGGCEEEEEEESS
T ss_pred cccc-CccCHhhcCCCCEEEEecCcccCC--CcccceEEEEECcH
Confidence 2110 0111211 134599999999999 568 899999887
No 192
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.14 E-value=1.1e-10 Score=128.04 Aligned_cols=216 Identities=13% Similarity=0.020 Sum_probs=135.6
Q ss_pred CceecccCC------CCCCcHHHHHHhhhcccccHHHHHHhhccC--cCc-CCCchHHHHHHHHHHHHHhcCCCCCCCcE
Q 002866 149 PKVCLDYCG------FGLFSYIQTLHYWESSTFSLSEITANLSNH--ALY-GGAEKGTVEHDIKTRIMDHLNIPENEYGL 219 (872)
Q Consensus 149 ~~IYLDyAA------tgp~p~~VieA~~e~~~F~ls~i~~nL~~~--~~y-gNpsS~~~ieeARerIA~lLgA~~dEY~V 219 (872)
+..|+|.++ .++.++.+++++.+ .+... ..+ +.+ .....+++++++++++++++ .|
T Consensus 49 g~~~lD~~~~~~~~~lG~~~~~v~~a~~~-----------~~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~~--~v 113 (449)
T 3a8u_X 49 GRKVYDSLSGLWTCGAGHTRKEIQEAVAK-----------QLSTLDYSPGFQYG--HPLSFQLAEKITDLTPGNLN--HV 113 (449)
T ss_dssp CCEEEETTHHHHTCTTCBSCHHHHHHHHH-----------HTTTCSCCCSSSCC--CHHHHHHHHHHHTTSSTTEE--EE
T ss_pred CCEEEECCccHhhccCCCCCHHHHHHHHH-----------HHHhCCCccccccC--CHHHHHHHHHHHHhCCCCCC--EE
Confidence 467899852 33447788887533 11111 011 222 24567899999999987765 59
Q ss_pred EEeCCHHHHHHHHHhhCC-CC------CCCeEEEecccCchhHHHHHHHHH----HcC-----cEEEEEeccC--CC--C
Q 002866 220 VFTVSRGSAFKLLAESYP-FH------TNKKLLTMFDYESQSVNWMAQSAK----EKG-----AKVYSAWFKW--PT--L 279 (872)
Q Consensus 220 VFTsnATeALnLVaeslp-f~------~Gd~ILT~~DhEHnSVl~~~~~Ak----rkG-----aeV~~Vpvd~--p~--g 279 (872)
+||+|+|+|+.+++..+. +. ++++||+.....|........... +.+ ..+..+++.. .. .
T Consensus 114 ~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 193 (449)
T 3a8u_X 114 FFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYS 193 (449)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTC
T ss_pred EEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccc
Confidence 999999999998877642 11 467887654434554443222210 111 1245555432 10 0
Q ss_pred ccC--------HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC-
Q 002866 280 KLC--------STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD- 344 (872)
Q Consensus 280 ~Id--------~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~- 344 (872)
.++ .++|+++|.... ..++++|.+..++|.||.+.| ++. .+.|+++|+++++|.+|. .|..
T Consensus 194 ~~d~~~~~~~~~~~le~~l~~~~----~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g 269 (449)
T 3a8u_X 194 RGMPKEGGIALADELLKLIELHD----ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTG 269 (449)
T ss_dssp SSSCSSSHHHHHHHHHHHHHHHC----GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred cCChHHHHHHHHHHHHHHHHhcC----CCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccC
Confidence 134 888888886420 124788888888888999999 874 567899999999999984 5531
Q ss_pred -CccCCCCCCCCcEEEEcccccCCCCCCc---eEEEEEeCCCcccccC
Q 002866 345 -MDSLGLSLFRPDFIITSFYRVFGFDPTG---FGCLLIKKSVMGSLQN 388 (872)
Q Consensus 345 -mipLDLs~l~~DFlv~S~HK~fG~~PtG---vG~LyVRk~~i~~L~P 388 (872)
+..++.-...+|++++| |.|++ | +|++++++++++.+.+
T Consensus 270 ~~~~~~~~~~~~di~s~s--K~l~~---G~~~~G~~~~~~~~~~~l~~ 312 (449)
T 3a8u_X 270 SMFGADSFGVTPDLMCIA--KQVTN---GAIPMGAVIASTEIYQTFMN 312 (449)
T ss_dssp SSSHHHHHTCCCSEEEEC--GGGGT---TSSCCEEEEEEHHHHHHHHT
T ss_pred cchhhhhcCCCCCEEEEc--ccccC---CCCceEEEEECHHHHHHhhc
Confidence 01122223458988555 99883 6 9999999887766653
No 193
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.14 E-value=1.7e-10 Score=123.89 Aligned_cols=207 Identities=11% Similarity=0.066 Sum_probs=133.9
Q ss_pred CceecccCCCC------CCcHHHHHHhhhcccccHHHHHHhhccCcCcC-CCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDYCGFG------LFSYIQTLHYWESSTFSLSEITANLSNHALYG-GAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtg------p~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg-NpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+.-|||+++.. ..++.+++++.+ .+.. ..++ +.......+++++++++++|. + .|+|
T Consensus 35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~-----------~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~--~--~v~~ 98 (395)
T 3nx3_A 35 AKKYLDFSSGIGVCALGYNHAKFNAKIKA-----------QVDK-LLHTSNLYYNENIAAAAKNLAKASAL--E--RVFF 98 (395)
T ss_dssp CCEEEESSHHHHTCTTCBSCHHHHHHHHH-----------HHTT-CSCCCTTSBCHHHHHHHHHHHHHHTC--S--EEEE
T ss_pred CCEEEECCCcHHhccCCCCCHHHHHHHHH-----------HHHh-ccccccccCCHHHHHHHHHHHHhcCC--C--eEEE
Confidence 46799988762 236778777532 1111 1111 111235677899999999983 3 5999
Q ss_pred eCCHHHHHHHHHhhCC-C-----CCCCeEEEecccCchhHHHHHHH---------HHHcCcEEEEEeccCCCCccCHHHH
Q 002866 222 TVSRGSAFKLLAESYP-F-----HTNKKLLTMFDYESQSVNWMAQS---------AKEKGAKVYSAWFKWPTLKLCSTDL 286 (872)
Q Consensus 222 TsnATeALnLVaeslp-f-----~~Gd~ILT~~DhEHnSVl~~~~~---------AkrkGaeV~~Vpvd~p~g~Id~edL 286 (872)
|+|+|+|+.+++..+. . .++++|++.....|......... ....+..+..++.+ +.++|
T Consensus 99 ~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~l 172 (395)
T 3nx3_A 99 TNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN------DISSV 172 (395)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT------CHHHH
T ss_pred eCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC------CHHHH
Confidence 9999999998776531 1 24677776543334433221110 01123455555532 56777
Q ss_pred HHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEE
Q 002866 287 RKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFI 358 (872)
Q Consensus 287 e~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFl 358 (872)
+++|. .++++|.+...+|.+|.+.| ++. .+.|+++|+++++|.+|. .|.. ...++.....+|++
T Consensus 173 ~~~l~--------~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~ 244 (395)
T 3nx3_A 173 EKLVN--------EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIM 244 (395)
T ss_dssp HTTCC--------TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE
T ss_pred HHhcc--------CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEE
Confidence 76664 35889999999999999988 764 467899999999999986 3321 11223334568988
Q ss_pred EEcccccCCCCCCceEEEEEeCCC-cccccC
Q 002866 359 ITSFYRVFGFDPTGFGCLLIKKSV-MGSLQN 388 (872)
Q Consensus 359 v~S~HK~fG~~PtGvG~LyVRk~~-i~~L~P 388 (872)
++| |.||+ +.++|+++++++. ++.+.+
T Consensus 245 t~s--K~~~~-G~~~G~~~~~~~~~~~~~~~ 272 (395)
T 3nx3_A 245 TSA--KALGC-GLSVGAFVINQKVASNSLEA 272 (395)
T ss_dssp EEC--GGGTT-TSCCEEEEECHHHHHHHSCT
T ss_pred Eec--ccccC-CCceEEEEEchhhhhhhcCC
Confidence 877 88876 5679999999988 777765
No 194
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.13 E-value=1.9e-11 Score=128.95 Aligned_cols=167 Identities=12% Similarity=0.105 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCC--eEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 198 VEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNK--KLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 198 ~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd--~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
...+.|++|++++|++. .+|+.|+|+|+.+++..+. .+|+ .|++. ...|.+.......+...|+++..++.
T Consensus 48 ~~~~l~~~la~~~~~~~----~i~~~~G~~a~~~al~~~~-~~gd~~~vi~~-~~~~~~~~~~~~~~~~~g~~~~~v~~- 120 (357)
T 3lws_A 48 IIEPFEQKFADVLGMDD----AVFFPSGTMAQQVALRIWS-DETDNRTVAYH-PLCHLEIHEQDGLKELHPIETILVGA- 120 (357)
T ss_dssp THHHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHHH-HHHTCCEEEEC-TTCHHHHSSTTHHHHHSSCEEEECSC-
T ss_pred HHHHHHHHHHHHhCCCc----EEEecCcHHHHHHHHHHHh-hcCCCcEEEec-ccceeeeeccchhhhccCcEEEEecC-
Confidence 35689999999999842 4667888999988877653 4566 45554 32344332211223446888887774
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcc-cchhcH---H-HHHHHHHCCcEEEeecccc------CCCC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVT-GAKYSY---Q-WMALAQQNHWHVLLDAGSL------GPKD 344 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvT-G~i~PL---e-~I~~Are~G~~VLVDAAQ~------aG~~ 344 (872)
+++.++.++|+++ .++++|.+...+|.| |.++|. + +++.|+++|+++++|.++. .+..
T Consensus 121 -~~~~~d~~~l~~~----------~~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 189 (357)
T 3lws_A 121 -ADRLMTLDEIKAL----------PDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKT 189 (357)
T ss_dssp -TTSCCCHHHHHTC----------CSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC
T ss_pred -CCCCcCHHHHhcC----------cCcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCC
Confidence 3467888888654 137899999999998 999984 4 3456799999999999865 1221
Q ss_pred CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 345 MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 345 mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
..++. ..+|.+++|+||+|++ |.| |+++.+++.++.+.
T Consensus 190 --~~~~~-~~~d~~~~s~sK~~~~-~~g-g~~~~~~~~~~~~~ 227 (357)
T 3lws_A 190 --AAEIA-GLFDSIYISFYKGLGG-IAG-AILAGPAAFCQTAR 227 (357)
T ss_dssp --HHHHH-TTSSEEEEESSSTTCC-SSC-EEEEECHHHHHHHH
T ss_pred --hHHHH-hcCCEEEEeccccCCC-Cce-EEEEcCHHHHHHHH
Confidence 11121 3579999999999976 888 99888777665543
No 195
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.13 E-value=2.9e-10 Score=134.96 Aligned_cols=170 Identities=9% Similarity=0.053 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccC
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKW 276 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~ 276 (872)
..+.++++.+|+++|++. .+++|+|+|.|+..++.++ .++||.||+. ...|.|+... +...|+++++++.++
T Consensus 195 g~i~eaE~~lA~~fGa~~---a~~v~nGts~An~~ai~al-~~pGD~VLv~-r~~H~S~~~~---l~lsGa~pv~v~~~~ 266 (715)
T 3n75_A 195 GPHKEAEQYIARVFNADR---SYMVTNGTSTANKIVGMYS-APAGSTILID-RNCHKSLTHL---MMMSDVTPIYFRPTR 266 (715)
T ss_dssp THHHHHHHHHHHHHTCSE---EEEESSHHHHHHHHHHHHH-CCTTCEEEEE-SSCCHHHHHH---HHHSCCEEEEECCCB
T ss_pred HHHHHHHHHHHHHhCCCC---ceEECcHHHHHHHHHHHHh-CCCCCEEEEC-CCccHHHHHH---HHHcCCEEEEEeccc
Confidence 578899999999999953 4666777788988888877 4789998877 4468888653 455799999998754
Q ss_pred CCC----cc-----CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHH-HHHHHCCcEEEeeccccCCCCCc
Q 002866 277 PTL----KL-----CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWM-ALAQQNHWHVLLDAGSLGPKDMD 346 (872)
Q Consensus 277 p~g----~I-----d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I-~~Are~G~~VLVDAAQ~aG~~mi 346 (872)
+.. .+ +.++|+++|.+..+ ..+++++++++. |.+|.++|++.| +.|+.+ .+++|.||.++....
T Consensus 267 ~~~gi~~~i~~~~~d~e~Le~~l~~~~~---~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~--~livDEAH~~~~~f~ 340 (715)
T 3n75_A 267 NAYGILGGIPQSEFQHATIAKRVKETPN---ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK--SIHFDSAWVPYTNFS 340 (715)
T ss_dssp CTTCCBCCCCGGGGSHHHHHHHHHHSTT---CCSCSEEEEESS-CTTSEEECHHHHHHHCCCS--EEEEECTTCTTGGGS
T ss_pred cccccccCcccccCCHHHHHHHHhhCcC---ccCceEEEEECC-CCCCccCCHHHHHHHhCcC--cEEEccccccccccC
Confidence 322 23 79999999975310 111247777777 899999999855 455654 378999987652001
Q ss_pred cC--CCCCC----CCcEE---EEcccccCCCCCCceEEEEEeCC
Q 002866 347 SL--GLSLF----RPDFI---ITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 347 pL--DLs~l----~~DFl---v~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
+. +.+.+ .+|++ +.|+||.+++ |++.|+|++++.
T Consensus 341 ~~~~~~~al~~g~~aD~vii~~~S~hKtL~g-ltqgs~i~v~~~ 383 (715)
T 3n75_A 341 PIYEGKCGMSGGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGD 383 (715)
T ss_dssp GGGTTSSTTSSSCCTTCEEEEEECHHHHSSC-CTTCEEEEEESC
T ss_pred CccccccccccCcCCCEEEEEEecccccccC-CCCeeEEEeCch
Confidence 11 12222 26876 9999999998 899999999876
No 196
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.13 E-value=1.5e-10 Score=124.14 Aligned_cols=207 Identities=11% Similarity=0.031 Sum_probs=128.4
Q ss_pred CceecccCCCCC------CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCGFGL------FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAtgp------~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+..|+|+++..+ .++.+++++.+ .+ ... ..+++........++++++++++|++ .|+||
T Consensus 38 g~~~lD~~~~~~~~~lg~~~p~v~~a~~~-------~~-~~~---~~~~~~~~~~~~~~l~~~la~~~~~~----~v~~~ 102 (406)
T 4adb_A 38 GKEYIDFAGGIAVNALGHAHPELREALNE-------QA-SKF---WHTGNGYTNEPVLRLAKKLIDATFAD----RVFFC 102 (406)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHH-------HH-TTC---SCCCTTSCCHHHHHHHHHHHHHSSCS----EEEEE
T ss_pred CCEEEECCCchhhcccCCCCHHHHHHHHH-------HH-Hhc---ccccCCcCCHHHHHHHHHHHhhCCCC----eEEEe
Confidence 467999888732 26777776432 11 111 01111111245788999999999874 49999
Q ss_pred CCHHHHHHHHHhhCCC------CCC-CeEEEecccCchhHHHHHHHHHH---------cCcEEEEEeccCCCCccCHHHH
Q 002866 223 VSRGSAFKLLAESYPF------HTN-KKLLTMFDYESQSVNWMAQSAKE---------KGAKVYSAWFKWPTLKLCSTDL 286 (872)
Q Consensus 223 snATeALnLVaeslpf------~~G-d~ILT~~DhEHnSVl~~~~~Akr---------kGaeV~~Vpvd~p~g~Id~edL 286 (872)
+|+|+|+.+++..+.. .+| ++|++.....|............ .+..+..+|. .+.++|
T Consensus 103 ~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l 176 (406)
T 4adb_A 103 NSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY------NDINSA 176 (406)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT------TCHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC------CcHHHH
Confidence 9999999998876521 034 77776544445554433322110 0124444443 256777
Q ss_pred HHHHhhhhccCCCCCceEEEEeCccCcccchh-----cHH-HHHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcE
Q 002866 287 RKQISSKKRRKKDSAAGLFVFPVQSRVTGAKY-----SYQ-WMALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDF 357 (872)
Q Consensus 287 e~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~-----PLe-~I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DF 357 (872)
+++|. +++++|.+.. +|.||.++ +++ +++.|+++|+++++|.++. .+.. ...++.....+|+
T Consensus 177 ~~~l~--------~~~~~v~~~p-~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~ 247 (406)
T 4adb_A 177 SALID--------DSTCAVIVEP-IQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDL 247 (406)
T ss_dssp HTTCS--------TTEEEEEECS-EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSE
T ss_pred HHHhc--------CCeEEEEEeC-CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCE
Confidence 76663 3589999985 56676554 455 4567899999999999985 2210 0122233456888
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 358 IITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 358 lv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
++ ++|.||+ ...+|++++++++++.+.+
T Consensus 248 ~t--~sK~~~~-G~r~G~~~~~~~~~~~~~~ 275 (406)
T 4adb_A 248 LT--TAKALGG-GFPVGALLATEECARVMTV 275 (406)
T ss_dssp EE--ECGGGGT-TSCCEEEEECHHHHHTCCT
T ss_pred EE--echhhcC-CCCeEEEEEcHHHHhhhcc
Confidence 85 5999984 3349999999988777764
No 197
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.13 E-value=7.7e-10 Score=122.03 Aligned_cols=207 Identities=10% Similarity=0.029 Sum_probs=125.6
Q ss_pred CCceecccCC---CCC---CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCG---FGL---FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAA---tgp---~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++..|+|.++ ..+ .++.+++++.+ ..... ..+.+.-......+.+++|++++|. + .|+|
T Consensus 63 ~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~--------~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~--~--~v~~ 127 (433)
T 1z7d_A 63 NDKRYYDFLSAYSSVNQGHCHPNILNAMIN--------QAKNL---TICSRAFFSVPLGICERYLTNLLGY--D--KVLM 127 (433)
T ss_dssp TCCEEEESSHHHHTTTTCBTCHHHHHHHHH--------HHTTC---SCCCTTSEEHHHHHHHHHHHHHHTC--S--EEEE
T ss_pred CCCEEEEcccchhhcccCCCCHHHHHHHHH--------HHHhC---CCccCCcCCHHHHHHHHHHHhhcCC--C--eEEE
Confidence 3467999766 222 56777777533 11111 1111111124567888999999984 3 4999
Q ss_pred eCCHHHHHHHHHhhCC--------CCCC-CeEEEecccCchhHHHHHHHHH----HcC-----cEEEEEeccCCCCccCH
Q 002866 222 TVSRGSAFKLLAESYP--------FHTN-KKLLTMFDYESQSVNWMAQSAK----EKG-----AKVYSAWFKWPTLKLCS 283 (872)
Q Consensus 222 TsnATeALnLVaeslp--------f~~G-d~ILT~~DhEHnSVl~~~~~Ak----rkG-----aeV~~Vpvd~p~g~Id~ 283 (872)
|+|+|+|+.+++.... ..+| ++||+.....|........... +.| ..+..+|. .+.
T Consensus 128 ~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~------~d~ 201 (433)
T 1z7d_A 128 MNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY------DDL 201 (433)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT------TCH
T ss_pred eCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC------CCH
Confidence 9999999998876531 1356 7777664333554433222211 011 24444443 268
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchh----cHHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKY----SYQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRP 355 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~----PLe~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~ 355 (872)
++|+++|.. +++++|.+..+++.+|.+. +++. .+.|+++|+++++|.+|. .+.. +..++.....+
T Consensus 202 ~~le~~l~~-------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~ 274 (433)
T 1z7d_A 202 EALEEELKD-------PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKP 274 (433)
T ss_dssp HHHHHHHTS-------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCC
T ss_pred HHHHHHhCC-------CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCC
Confidence 889888841 2588999988888899987 6764 567899999999999986 3220 01122223568
Q ss_pred cEEEEcccccCCCCCCc---eEEEEEeCCCccccc
Q 002866 356 DFIITSFYRVFGFDPTG---FGCLLIKKSVMGSLQ 387 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtG---vG~LyVRk~~i~~L~ 387 (872)
|+++ +.|++|+ | +|++++++++++.+.
T Consensus 275 di~t--~sK~l~~---G~~~~G~v~~~~~~~~~l~ 304 (433)
T 1z7d_A 275 DVIL--LGKALSG---GHYPISAVLANDDIMLVIK 304 (433)
T ss_dssp SEEE--ECGGGGT---TSSCCEEEEECHHHHTTCC
T ss_pred CEEE--ECccccC---CCCCeEEEEECHHHHhhhc
Confidence 9885 5599984 6 999999988766554
No 198
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.12 E-value=2.1e-10 Score=127.20 Aligned_cols=219 Identities=9% Similarity=-0.006 Sum_probs=134.5
Q ss_pred CCceecccCCC------CCCcHHHH-H-HhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcC-CCCCCCc
Q 002866 148 SPKVCLDYCGF------GLFSYIQT-L-HYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLN-IPENEYG 218 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~Vi-e-A~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLg-A~~dEY~ 218 (872)
++..|||+.+. +..++.++ + ++.+ + +. .+.....+++.-......+.+++++++++ .+++ .
T Consensus 52 ~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~---~----~~-~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~--~ 121 (449)
T 2cjg_A 52 TGRRYLDMFTFVASSALGMNPPALVDDREFHA---E----LM-QAALNKPSNSDVYSVAMARFVETFARVLGDPALP--H 121 (449)
T ss_dssp TCCEEEESSHHHHTCSSCBSCHHHHTCHHHHH---H----HH-HHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCC--E
T ss_pred CCcEEEEccCCccccCCCCCCHHHHHHHHHHH---H----HH-HHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCC--E
Confidence 35789998432 34578888 7 7543 0 10 11111112211112455678889999997 4444 5
Q ss_pred EEEeCCHHHHHHHHHhhC-CC-----------C-CCCeEEEecccCchhHHHHHHH-----HHHcCc-----EEEEEecc
Q 002866 219 LVFTVSRGSAFKLLAESY-PF-----------H-TNKKLLTMFDYESQSVNWMAQS-----AKEKGA-----KVYSAWFK 275 (872)
Q Consensus 219 VVFTsnATeALnLVaesl-pf-----------~-~Gd~ILT~~DhEHnSVl~~~~~-----AkrkGa-----eV~~Vpvd 275 (872)
|+||+|+|+|+.+++... .+ . +|++||+.....|.....+... ..+.|. .+..+|.+
T Consensus 122 v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (449)
T 2cjg_A 122 LFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYM 201 (449)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCC
T ss_pred EEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCC
Confidence 999999999999877532 11 1 2778887654335433322111 112343 56666654
Q ss_pred C--CCC-------ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-
Q 002866 276 W--PTL-------KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL- 340 (872)
Q Consensus 276 ~--p~g-------~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~- 340 (872)
. ... .++.++|+++|... .+++++|.+..++|.+|.+.| ++. .+.|+++|+++++|.+|.
T Consensus 202 d~~~~~~~~~~~~~~~~~~le~~i~~~-----~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g 276 (449)
T 2cjg_A 202 RPGLDEPAMAALEAEALRQARAAFETR-----PHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTG 276 (449)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHS-----TTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred CchhhccccchhhHHHHHHHHHHHHhc-----CCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccC
Confidence 3 110 13455687777531 236899999999999998777 764 467899999999999987
Q ss_pred CCCC--CccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 341 GPKD--MDSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 341 aG~~--mipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
.|.. +..++.....+|++++| |+| | +|++++++++++.|.+
T Consensus 277 ~g~~g~~~~~~~~~~~~di~t~s--K~l---~--iG~~~~~~~~~~~l~~ 319 (449)
T 2cjg_A 277 CGLTGTAWAYQQLDVAPDIVAFG--KKT---Q--VCGVMAGRRVDEVADN 319 (449)
T ss_dssp TTTTSSSSTHHHHTCCCSEEEEC--GGG---S--SEEEEECGGGGGSTTC
T ss_pred CCccCcceeecccCCCceEEEec--Ccc---c--EEEEEECHHHhhhhhh
Confidence 4321 00112223578998877 987 3 7899999988776654
No 199
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.08 E-value=5.7e-10 Score=122.25 Aligned_cols=207 Identities=10% Similarity=0.043 Sum_probs=128.7
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+..|+|.++. ++.++.+++++.+ ..... ..+.+........+.++++++++|. + .|+||
T Consensus 56 g~~~lD~~~~~~~~~lG~~~p~v~~ai~~--------~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~--~--~v~~~ 120 (420)
T 2pb2_A 56 GKEYIDFAGGIAVTALGHCHPALVEALKS--------QGETL---WHTSNVFTNEPALRLGRKLIDATFA--E--RVLFM 120 (420)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHH--------HHTTC---CCCCTTSCCHHHHHHHHHHHHHSSC--S--EEEEE
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHH--------HHHhc---ccccCccCCHHHHHHHHHHHhhCCC--C--eEEEe
Confidence 4679998654 3346778777533 11111 1111111125677899999999984 3 49999
Q ss_pred CCHHHHHHHHHhhCC-C-----CCCC-eEEEecccCchhHHHHHHHH----HHcCc-----EEEEEeccCCCCccCHHHH
Q 002866 223 VSRGSAFKLLAESYP-F-----HTNK-KLLTMFDYESQSVNWMAQSA----KEKGA-----KVYSAWFKWPTLKLCSTDL 286 (872)
Q Consensus 223 snATeALnLVaeslp-f-----~~Gd-~ILT~~DhEHnSVl~~~~~A----krkGa-----eV~~Vpvd~p~g~Id~edL 286 (872)
+|+|+|+.+++..+. + ++|+ +||+.....|.....+.... .+.|. .+..+|. .+.++|
T Consensus 121 ~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~------~d~~~l 194 (420)
T 2pb2_A 121 NSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF------NDLHAV 194 (420)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT------TCHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC------CCHHHH
Confidence 999999999887652 1 0464 77765433355444332221 01121 2555543 267888
Q ss_pred HHHHhhhhccCCCCCceEEEEeCccCcccc----hhcHHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcEE
Q 002866 287 RKQISSKKRRKKDSAAGLFVFPVQSRVTGA----KYSYQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDFI 358 (872)
Q Consensus 287 e~~I~~~~rr~~~~~T~LVa~p~vSNvTG~----i~PLe~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DFl 358 (872)
+++|.. ++++|.+...+|.+|. ..+++. .+.|+++|+++++|.+|. .+.. +..++.....+|++
T Consensus 195 e~~i~~--------~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii 266 (420)
T 2pb2_A 195 KAVMDD--------HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL 266 (420)
T ss_dssp HHHCCT--------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE
T ss_pred HHHhcc--------CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE
Confidence 877742 5889999999998886 344553 467799999999999985 2210 01112223468988
Q ss_pred EEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 359 ITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 359 v~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
+ +.|+||+ ...+|++++++++++.+.
T Consensus 267 t--~sK~l~~-G~~iG~~~~~~~l~~~l~ 292 (420)
T 2pb2_A 267 T--SAKALGG-GFPVSAMLTTQEIASAFH 292 (420)
T ss_dssp E--ECGGGGT-TSCCEEEEECHHHHTTCC
T ss_pred E--ecccccC-CCceEEEEEhHHHHHhhc
Confidence 5 5699985 445999999987665554
No 200
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=98.64 E-value=1.6e-11 Score=131.93 Aligned_cols=177 Identities=13% Similarity=0.161 Sum_probs=121.6
Q ss_pred HHHHHHHHHHhc----C--CCCCCCcEEEeCCHHHHHHHHHhhCCCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 199 EHDIKTRIMDHL----N--IPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 199 ieeARerIA~lL----g--A~~dEY~VVFTsnATeALnLVaeslpf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
..+.|++|++++ | ++++ .|+||+|+|+|+.+++..+ .++|++|++..- .|. .+...++..|+++..+
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~--~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p-~~~---~~~~~~~~~g~~~~~~ 140 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDKE--DIVFVEGVVPAISIAIQAF-TKEGEAVLINSP-VYP---PFARSVRLNNRKLVSN 140 (392)
Confidence 456777777765 4 4444 5999999999999999887 467888776532 222 2233455678888888
Q ss_pred eccCCC--CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH---H-HHHHHHHCCcEEEeeccccCCCC--
Q 002866 273 WFKWPT--LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY---Q-WMALAQQNHWHVLLDAGSLGPKD-- 344 (872)
Q Consensus 273 pvd~p~--g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL---e-~I~~Are~G~~VLVDAAQ~aG~~-- 344 (872)
|.+..+ ..++.++|++++.. .++++|.++..+|.||.++|. + +++.|+++|+++++|.++.....
T Consensus 141 ~~~~~~g~~~~d~~~l~~~l~~-------~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g 213 (392)
T 3b1d_A 141 SLKEENGLFQIDFEQLENDIVE-------NDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFG 213 (392)
Confidence 875322 23678888887752 247788899999999999984 4 34667899999999999764210
Q ss_pred CccCCCC---C--CCCcEEEEcccccCCCCCCceEEEEEeCC-CcccccCC
Q 002866 345 MDSLGLS---L--FRPDFIITSFYRVFGFDPTGFGCLLIKKS-VMGSLQNQ 389 (872)
Q Consensus 345 mipLDLs---~--l~~DFlv~S~HK~fG~~PtGvG~LyVRk~-~i~~L~P~ 389 (872)
.....+. . .+.++++.|++|+||.+...+|++++++. +++.+...
T Consensus 214 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 264 (392)
T 3b1d_A 214 HEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQ 264 (392)
Confidence 0011221 1 34568999999999831224799998654 77666543
No 201
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.05 E-value=1.1e-10 Score=126.93 Aligned_cols=159 Identities=11% Similarity=0.084 Sum_probs=112.8
Q ss_pred HHHHHHHHHhcCC-----CCCCCcEEEeCCHHHHHHHHHhhCCCCCCC----eEEEecccCchhHHHHHHHHHHcCcEEE
Q 002866 200 HDIKTRIMDHLNI-----PENEYGLVFTVSRGSAFKLLAESYPFHTNK----KLLTMFDYESQSVNWMAQSAKEKGAKVY 270 (872)
Q Consensus 200 eeARerIA~lLgA-----~~dEY~VVFTsnATeALnLVaeslpf~~Gd----~ILT~~DhEHnSVl~~~~~AkrkGaeV~ 270 (872)
.+.|+.||++++. +++ ..|++|+|+|+|+++++.++ ..+|| +|++.. -.|.. +...++..|+++.
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~l-~~~Gd~~~~~Vlv~~-P~y~~---~~~~~~~~g~~~~ 144 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATED-RYIVVGTGSTQLCQAAVHAL-SSLARSQPVSVVAAA-PFYST---YVEETTYVRSGMY 144 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSS-SEEEEEEHHHHHHHHHHHHH-HHTSSSSSEEEEECS-SCCTH---HHHHHHTTCBTTE
T ss_pred HHHHHHHHHHHHhcCCCCCCC-CeEEEeCChHHHHHHHHHHh-cCCCCCCcceEEEcC-CCchh---HHHHHHHcCCeEE
Confidence 5799999999983 332 25999999999999999987 36788 887653 23343 3445666799988
Q ss_pred EEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCCccCCC
Q 002866 271 SAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGL 350 (872)
Q Consensus 271 ~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~mipLDL 350 (872)
.++++.... . .+++++|.++..+|.||.+++ +++..++.+++++++|.+++.++ ..++..
T Consensus 145 ~~~~d~~~l--~----------------~~~~k~v~l~~p~NPtG~~~~-~l~~~~~~~~~~ii~De~y~~~~-~~~l~~ 204 (391)
T 3bwn_A 145 KWEGDAWGF--D----------------KKGPYIELVTSPNNPDGTIRE-TVVNRPDDDEAKVIHDFAYYWPH-YTPITR 204 (391)
T ss_dssp EEEEESTTC--C----------------CCSCEEEEEESSCTTTCCCCC-CCC-----CCCEEEEECTTCSTT-TSCCCC
T ss_pred EecCCHHHc--C----------------CCCCEEEEECCCCCCCchhHH-HHHHHhhcCCCEEEEeCCCCCCC-CCcccc
Confidence 888764321 1 125889999999999999997 43342234459999999987543 124443
Q ss_pred CCCCCcEEEEcccccCCCCCCce--EEEEE-eCCCccccc
Q 002866 351 SLFRPDFIITSFYRVFGFDPTGF--GCLLI-KKSVMGSLQ 387 (872)
Q Consensus 351 s~l~~DFlv~S~HK~fG~~PtGv--G~LyV-Rk~~i~~L~ 387 (872)
..+.++++.|++|.|| +.|+ |++++ .+++++.|.
T Consensus 205 -~~~~~i~~~S~SK~~g--~~GlRiG~~~~~~~~l~~~l~ 241 (391)
T 3bwn_A 205 -RQDHDIMLFTFSKITG--HAGSRIGWALVKDKEVAKKMV 241 (391)
T ss_dssp -CBCCSEEEEEHHHHHS--CGGGCEEEEEECCHHHHHHHH
T ss_pred -CCCCeEEEEechhhcC--CCccceEEEEecCHHHHHHHH
Confidence 4567899999999998 5585 99998 556555443
No 202
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.03 E-value=1e-09 Score=119.79 Aligned_cols=209 Identities=13% Similarity=0.076 Sum_probs=132.8
Q ss_pred CCceecccCCCCC------CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGFGL------FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAtgp------~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||+.+... .++.+++++.+ .+.. ...++.|+ ....+.+++++++++ +++ .|+|
T Consensus 53 ~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~-------~~~~----~~~~~~~~--~~~~~l~~~la~~~~-~~~--~v~~ 116 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITGHAHPHITKAITT-------AAEN----GVLYGTPT--ALEVKFAKMLKEAMP-ALD--KVRF 116 (434)
T ss_dssp TCCEEEECCGGGTTCSSCBTCHHHHHHHHH-------HHHH----CSCCSSCC--HHHHHHHHHHHHHCT-TCS--EEEE
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHH-------HHHh----CcCCCCCC--HHHHHHHHHHHHhCC-CCC--EEEE
Confidence 3567999887642 47788887543 1211 12234443 345678889999997 444 5999
Q ss_pred eCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcC-----------------cEEEEEeccCCCCccCH
Q 002866 222 TVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKG-----------------AKVYSAWFKWPTLKLCS 283 (872)
Q Consensus 222 TsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkG-----------------aeV~~Vpvd~p~g~Id~ 283 (872)
|+|+|+|+.+++.... +..+++||+....-|......... ...+ ..+..+|.+ +.
T Consensus 117 ~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~ 189 (434)
T 3l44_A 117 VNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVA-AGSGPSTLGTPDSAGVPQSIAQEVITVPFN------NV 189 (434)
T ss_dssp ESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC--------CCCBSSTTCCHHHHTTEEEECTT------CH
T ss_pred eCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhh-cCCcccccCCCCcCCCCCcCCCceEecCcc------cH
Confidence 9999999998776532 124567776433223322111100 0000 123333321 67
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeeccccC---CCCCccCCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSLG---PKDMDSLGLSLFRP 355 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~a---G~~mipLDLs~l~~ 355 (872)
++|+++|.... +++.+|.+...++.+|.+.| ++. .+.|+++|+++++|.++.. |. +..++.-...+
T Consensus 190 ~~le~~l~~~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~-~~~~~~~~~~~ 263 (434)
T 3l44_A 190 ETLKEALDKWG-----HEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMY-GGAQDLLGVTP 263 (434)
T ss_dssp HHHHHHHHHHG-----GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSS-SCHHHHHTCCC
T ss_pred HHHHHHHHhCC-----CCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccc-cHHHHHcCCCC
Confidence 88988886421 24789999999999999998 874 4678999999999999862 22 01122233568
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 356 DFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
|++++| |.||+ +..+|+++.++++++.+.+
T Consensus 264 di~t~s--K~~~~-G~~iG~~~~~~~i~~~~~~ 293 (434)
T 3l44_A 264 DLTALG--KVIGG-GLPIGAYGGKKEIMEQVAP 293 (434)
T ss_dssp SEEEEE--GGGGT-TSSCEEEEECHHHHTTBTT
T ss_pred Ceeehh--hhhcC-CcCeeeEEEcHHHHHhhcc
Confidence 887766 98886 6779999999988877764
No 203
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.02 E-value=4.4e-09 Score=114.81 Aligned_cols=209 Identities=11% Similarity=0.068 Sum_probs=131.0
Q ss_pred CCceecccCCCCC------CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGFGL------FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAtgp------~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++..|||+.+... .++.+++++.+ .+.....++.|+ ....+.+++++++++ .++ .|+|
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~-----------~~~~~~~~~~~~--~~~~~la~~l~~~~~-~~~--~v~~ 114 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGHNHPAIRQAVIE-----------AVERGLSFGAPT--EMEVKMAQLVTDLVP-TMD--MVRM 114 (429)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHH-----------HHTTCSCCSSCC--HHHHHHHHHHHHHST-TCS--EEEE
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHH-----------HHHhCcccCCCC--HHHHHHHHHHHhhCC-CCC--EEEE
Confidence 3578999987643 36778877532 121111234444 455678889999997 444 5999
Q ss_pred eCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcCc-----------------EEEEEeccCCCCccCH
Q 002866 222 TVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKGA-----------------KVYSAWFKWPTLKLCS 283 (872)
Q Consensus 222 TsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGa-----------------eV~~Vpvd~p~g~Id~ 283 (872)
|+|+|+|+.+++.... +..++.|++.....|......... ...|. .+..++. .+.
T Consensus 115 ~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~ 187 (429)
T 4e77_A 115 VNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVK-AGSGALTLGQPNSPGVPTDFAKHTLTCTY------NDL 187 (429)
T ss_dssp ESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC-------------------CCCTTSCGGGGTTEEEECT------TCH
T ss_pred eCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhh-cCCcccccCCCCcCCCCCccCCceeecCC------CCH
Confidence 9999999998776321 123456666543334444322110 00111 1122221 167
Q ss_pred HHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc---CCCCCccCCCCCCCC
Q 002866 284 TDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL---GPKDMDSLGLSLFRP 355 (872)
Q Consensus 284 edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~---aG~~mipLDLs~l~~ 355 (872)
++|+++|... .+++.+|.+..+++.+|.+.| ++. .+.|+++|+++++|.+|. .|. +..++.-...+
T Consensus 188 ~~le~~l~~~-----~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~-~~~~~~~~~~p 261 (429)
T 4e77_A 188 ASVRQAFEQY-----PQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVAL-AGAQDYYHVIP 261 (429)
T ss_dssp HHHHHHHHHS-----TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBT-TCHHHHTTCCC
T ss_pred HHHHHHHHhc-----CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCc-chHHHhcCCCC
Confidence 8999888642 235889999999999999999 874 567899999999999987 332 11222233467
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 356 DFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
|++++| |.||+ ...+|+++.++++++.+.+
T Consensus 262 di~t~s--K~~~~-G~~~G~~~~~~~~~~~l~~ 291 (429)
T 4e77_A 262 DLTCLG--KIIGG-GMPVGAFGGRREVMNALAP 291 (429)
T ss_dssp SEEEEE--GGGGT-TSCCEEEEECHHHHTTBTT
T ss_pred Ceeeec--ccccC-CCCeEEEEECHHHHHHhcc
Confidence 987665 98885 4568999999888877764
No 204
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.02 E-value=2.2e-09 Score=118.82 Aligned_cols=208 Identities=10% Similarity=0.006 Sum_probs=130.2
Q ss_pred CceecccCC---CCC---CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCG---FGL---FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAA---tgp---~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+..|+|+++ ..+ .++.+++++.+ ..... ..+.+.-......+.++++++++|. + .|+||
T Consensus 75 g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~--------~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~--~--~v~~~ 139 (439)
T 2oat_A 75 GRKYFDFLSSYSAVNQGHCHPKIVNALKS--------QVDKL---TLTSRAFYNNVLGEYEEYITKLFNY--H--KVLPM 139 (439)
T ss_dssp CCEEEESSGGGGTTTTCBTCHHHHHHHHH--------HHTTC---SCCCTTSEESSHHHHHHHHHHHHTC--S--EEEEE
T ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHH--------HHHhc---CcccCccCCHHHHHHHHHHHHhcCC--C--EEEEe
Confidence 467999876 222 56778777533 11111 1111100123456788899999974 3 49999
Q ss_pred CCHHHHHHHHHhhCC-C-------CCC-CeEEEecccCchhHHHHHHHHH----HcC-----cEEEEEeccCCCCccCHH
Q 002866 223 VSRGSAFKLLAESYP-F-------HTN-KKLLTMFDYESQSVNWMAQSAK----EKG-----AKVYSAWFKWPTLKLCST 284 (872)
Q Consensus 223 snATeALnLVaeslp-f-------~~G-d~ILT~~DhEHnSVl~~~~~Ak----rkG-----aeV~~Vpvd~p~g~Id~e 284 (872)
+|+|+|+.+++..+. | .+| ++||+.....|........... +.| ..+..+|.+ +.+
T Consensus 140 ~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~------d~~ 213 (439)
T 2oat_A 140 NTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN------DLP 213 (439)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS------CHH
T ss_pred CCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC------CHH
Confidence 999999998877632 1 246 6777654333554443322110 111 456655542 678
Q ss_pred HHHHHHhhhhccCCCCCceEEEEeCccCcccchh----cHHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCc
Q 002866 285 DLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKY----SYQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPD 356 (872)
Q Consensus 285 dLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~----PLe~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~D 356 (872)
+|+++|.. +++++|.+..+++.+|.+. +++. .+.|+++|+++++|.+|. .+.. +..++.....+|
T Consensus 214 ~le~~l~~-------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~D 286 (439)
T 2oat_A 214 ALERALQD-------PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPD 286 (439)
T ss_dssp HHHHHTTS-------TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS
T ss_pred HHHHHhCC-------CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCc
Confidence 88888741 2578898888888899887 6764 567899999999999985 2210 011233345689
Q ss_pred EEEEcccccCCCCC-CceEEEEEeCCCccccc
Q 002866 357 FIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 357 Flv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~ 387 (872)
++ ++.|.+|+ . ..+|++++++++++.+.
T Consensus 287 i~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~ 315 (439)
T 2oat_A 287 IV--LLGKALSG-GLYPVSAVLCDDDIMLTIK 315 (439)
T ss_dssp EE--EECGGGGT-TSSCCEEEEECHHHHTTSC
T ss_pred EE--EecccccC-CCCCeEEEEECHHHHhccC
Confidence 87 55699884 1 12999999988766554
No 205
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.00 E-value=4.9e-10 Score=121.99 Aligned_cols=219 Identities=9% Similarity=-0.015 Sum_probs=134.6
Q ss_pred CceecccCCCC------CCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCGFG------LFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAtg------p~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+..|||+++.. ..++.+++++.+ .+ .... +...+.++ ....+.+++++++++++++ .|+||
T Consensus 42 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~-------~~-~~~~-~~~~~~~~--~~~~~l~~~la~~~~~~~~--~v~~~ 108 (433)
T 1zod_A 42 GRAILDFTSGQMSAVLGHCHPEIVSVIGE-------YA-GKLD-HLFSEMLS--RPVVDLATRLANITPPGLD--RALLL 108 (433)
T ss_dssp CCEEEETTHHHHTCTTCBTCHHHHHHHHH-------HH-HHCC-CCCTTCCC--HHHHHHHHHHHHHSCTTCC--EEEEE
T ss_pred CCEEEEcccchhccccCCCCHHHHHHHHH-------HH-HhCc-ccccccCC--HHHHHHHHHHHHhCCCCcC--EEEEe
Confidence 46789985432 236788887543 12 1111 11112222 4456788899999998765 59999
Q ss_pred CCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHHH---Hc-----CcEEEEEeccCC----C-------CccC
Q 002866 223 VSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSAK---EK-----GAKVYSAWFKWP----T-------LKLC 282 (872)
Q Consensus 223 snATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~Ak---rk-----GaeV~~Vpvd~p----~-------g~Id 282 (872)
+|+|+|+.+++... .+..+++||+.....|........... .. ...+..+++... . +.++
T Consensus 109 ~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d 188 (433)
T 1zod_A 109 STGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAE 188 (433)
T ss_dssp SCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHH
T ss_pred CchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHH
Confidence 99999999987643 122346777654333544433221100 00 013444544210 0 1235
Q ss_pred HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCCCCC
Q 002866 283 STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFR 354 (872)
Q Consensus 283 ~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~ 354 (872)
.++|+++|... ...++++|.+..++|.||.+.| ++. .+.|+++|+++++|.++. .+.. +..++.....
T Consensus 189 ~~~le~~l~~~----~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~ 264 (433)
T 1zod_A 189 LDYAFDLIDRQ----SSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVT 264 (433)
T ss_dssp HHHHHHHHHHH----CCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCC
T ss_pred HHHHHHHHHhc----CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCC
Confidence 78888888642 1125788888888888998887 764 567899999999999987 4421 0112222456
Q ss_pred CcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 355 PDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 355 ~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
+|++++| |.||. ..++|++++++++++.+.
T Consensus 265 ~di~s~s--K~~~~-G~~ig~~~~~~~~~~~~~ 294 (433)
T 1zod_A 265 PDILTLS--KTLGA-GLPLAAIVTSAAIEERAH 294 (433)
T ss_dssp CSEEEEC--HHHHT-TSSCEEEEECHHHHHHHH
T ss_pred CCEEEec--ccccC-CCCeeEEEEhHHHHHhhc
Confidence 8988766 98885 456899999988766554
No 206
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.00 E-value=5.1e-09 Score=114.42 Aligned_cols=221 Identities=9% Similarity=-0.001 Sum_probs=134.8
Q ss_pred CceecccCCCCC------CcHHHHHHhhhcccccHHHHHHhhccCcCcC-CCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDYCGFGL------FSYIQTLHYWESSTFSLSEITANLSNHALYG-GAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAtgp------~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg-NpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+.-|+|+++..+ .++.+++++.+ .+ ... ..|. +........+++++++++++...++ .|+|
T Consensus 42 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~-------~~-~~~---~~~~~~~~~~~~~~~l~~~la~~~~~~~~~-~v~~ 109 (439)
T 3dxv_A 42 GRELIDLSGAWGAASLGYGHPAIVAAVSA-------AA-ANP---AGATILSASNAPAVTLAERLLASFPGEGTH-KIWF 109 (439)
T ss_dssp SCEEEESSTTTTTCTTCBSCHHHHHHHHH-------HH-HSC---SCSCSSSSEEHHHHHHHHHHHHTTTCTTTE-EEEE
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHH-------HH-Hhc---cCccccccCCHHHHHHHHHHHHhCCCCCCC-EEEE
Confidence 467899887766 56777776532 11 111 1121 1112356788999999999765422 5999
Q ss_pred eCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcC--c---------EEEEEeccCCCCcc----CHHH
Q 002866 222 TVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKG--A---------KVYSAWFKWPTLKL----CSTD 285 (872)
Q Consensus 222 TsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkG--a---------eV~~Vpvd~p~g~I----d~ed 285 (872)
|+|+|+|+.+++.... +.++++||+.....|.............. . .+..+|.+...... +.++
T Consensus 110 ~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 189 (439)
T 3dxv_A 110 GHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTL 189 (439)
T ss_dssp ESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHH
T ss_pred eCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHH
Confidence 9999999998877621 12456676654433454433221111000 0 12233332110001 4788
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCCcE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRPDF 357 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~DF 357 (872)
|+++|.. ....++++|.+...+|.+|.+.| ++ +.+.|+++|+++++|.++. .+.. ...++.....+|+
T Consensus 190 le~~l~~----~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di 265 (439)
T 3dxv_A 190 LTEKLAA----VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDI 265 (439)
T ss_dssp HHHHHHT----SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSE
T ss_pred HHHHHHh----cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCE
Confidence 8888842 12246889999999999999999 87 4567899999999999985 2110 1233444456898
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 358 IITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 358 lv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+++ -|.||+ -..+|+++.++++++.+.+
T Consensus 266 ~s~--sK~~~~-G~riG~~~~~~~~~~~~~~ 293 (439)
T 3dxv_A 266 LVL--GKGLGG-GLPLSAVIAPAEILDCASA 293 (439)
T ss_dssp EEE--CGGGGT-TSCCEEEEEEHHHHTSCSS
T ss_pred EEE--cchhcC-CcceEEEEECHHHHhhhcC
Confidence 855 598884 2347999999887766653
No 207
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=98.98 E-value=9.2e-10 Score=119.85 Aligned_cols=209 Identities=10% Similarity=0.040 Sum_probs=131.5
Q ss_pred CceecccCCCCC------CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCGFGL------FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAtgp------~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+.-|||..+... .++.+++++.+ .+.....|+.++ ....+.+++++++++ +++ .|+||
T Consensus 51 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~-----------~~~~~~~~~~~~--~~~~~la~~l~~~~~-~~~--~v~~~ 114 (427)
T 3fq8_A 51 GNRYIDYVGTWGPAICGHAHPEVIEALKV-----------AMEKGTSFGAPC--ALENVLAEMVNDAVP-SIE--MVRFV 114 (427)
T ss_dssp SCEEEESSGGGTTCTTCBTCHHHHHHHHH-----------HHTTCSCCSSCC--HHHHHHHHHHHHHST-TCS--EEEEE
T ss_pred CCEEEECCCchhhhccCCCCHHHHHHHHH-----------HHHhCCCcCCCC--HHHHHHHHHHHHhCC-CCC--EEEEe
Confidence 467999876642 37778777532 111111233343 456678889999997 444 59999
Q ss_pred CCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHH----HH------HcC------cEEEEEeccCCCCccCHHH
Q 002866 223 VSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQS----AK------EKG------AKVYSAWFKWPTLKLCSTD 285 (872)
Q Consensus 223 snATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~----Ak------rkG------aeV~~Vpvd~p~g~Id~ed 285 (872)
+|+|+|+.+++... .+..+++||+.....|......... .. ..| ..+..+|.+ +.++
T Consensus 115 ~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~ 188 (427)
T 3fq8_A 115 NSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN------DLEA 188 (427)
T ss_dssp SSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT------CHHH
T ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC------CHHH
Confidence 99999999877321 1123456665432223211110000 00 001 123444432 6889
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc---CCCCCccCCCCCCCCcE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL---GPKDMDSLGLSLFRPDF 357 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~---aG~~mipLDLs~l~~DF 357 (872)
|+++|... ..++++|.+...++.+|.+.| ++. .+.|+++|+++++|.++. .|. +..++.....+|+
T Consensus 189 le~~l~~~-----~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~-~~~~~~~~~~~di 262 (427)
T 3fq8_A 189 VKALFAEN-----PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAY-GGVQEKFGVTPDL 262 (427)
T ss_dssp HHHHHHHS-----TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBT-THHHHHTTCCCSE
T ss_pred HHHHHHhC-----CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCc-chhhHhcCCCCCh
Confidence 99988752 235889999999999999999 874 567899999999999986 221 1122233456898
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 358 IITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 358 lv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+++| |.||+ -..+|+++.++++++.+.+
T Consensus 263 ~t~s--K~~~~-G~~~G~~~~~~~~~~~~~~ 290 (427)
T 3fq8_A 263 TTLG--KIIGG-GLPVGAYGGKREIMQLVAP 290 (427)
T ss_dssp EEEC--GGGGT-TSSCEEEEECHHHHTTBTT
T ss_pred hhhh--hhhhC-CcceEEEEEcHHHHHhhcc
Confidence 8887 99884 2239999999988877764
No 208
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=98.97 E-value=3.4e-09 Score=116.70 Aligned_cols=207 Identities=18% Similarity=0.085 Sum_probs=122.5
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+..|+|+++. ++.++.+++++.+ .+.....++.+. +..+++.+.++++++ .++ .|+||
T Consensus 56 g~~~iD~~~~~~~~~lg~~~~~v~~a~~~-----------~~~~~~~~~~~~--~~~~~la~~l~~~~~-~~~--~v~~~ 119 (453)
T 2cy8_A 56 GNVYLDFFGGHGALVLGHGHPRVNAAIAE-----------ALSHGVQYAASH--PLEVRWAERIVAAFP-SIR--KLRFT 119 (453)
T ss_dssp CCEEEESCTTTTSCTTCBTCHHHHHHHHH-----------HHTTTCSSCSSC--HHHHHHHHHHHHHCT-TCS--EEEEE
T ss_pred CCEEEECcccHhhcccCCCCHHHHHHHHH-----------HHHhCCCCCCCC--HHHHHHHHHHHhhCC-CCC--EEEEe
Confidence 3578998554 2356777777533 111111233333 455667777777776 444 59999
Q ss_pred CCHHHHHHHHHhh---CCCCCCCeEEEecccCchhHHHHHHHH-------HHcCcE------EEEEeccCCCCccCHHHH
Q 002866 223 VSRGSAFKLLAES---YPFHTNKKLLTMFDYESQSVNWMAQSA-------KEKGAK------VYSAWFKWPTLKLCSTDL 286 (872)
Q Consensus 223 snATeALnLVaes---lpf~~Gd~ILT~~DhEHnSVl~~~~~A-------krkGae------V~~Vpvd~p~g~Id~edL 286 (872)
+|+|+|+.+++.. +. .+++||+.....|.......... ...|+. +..++ + .+.++|
T Consensus 120 ~gg~eA~~~al~~ar~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~----~d~~~l 191 (453)
T 2cy8_A 120 GSGTETTLLALRVARAFT--GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIR--P----DDIEGM 191 (453)
T ss_dssp SCHHHHHHHHHHHHHHHH--CCCEEEEECC----------------------------CGGGEEEEC--T----TCHHHH
T ss_pred CCHHHHHHHHHHHHHHhh--CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecC--C----CCHHHH
Confidence 9999999988776 43 34566654322233222111101 012432 33333 2 268899
Q ss_pred HHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeeccccCCCC---CccCCCCCCCCcEE
Q 002866 287 RKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSLGPKD---MDSLGLSLFRPDFI 358 (872)
Q Consensus 287 e~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~aG~~---mipLDLs~l~~DFl 358 (872)
+++|.... +++++|.+..+.|.||.+.| ++. .+.|+++|+++++|.++. |.. +..++.-...+|++
T Consensus 192 e~~l~~~~-----~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~ 265 (453)
T 2cy8_A 192 REVFANHG-----SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHGMQALLDVQPDLT 265 (453)
T ss_dssp HHHHHHHG-----GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTHHHHHHTCCCSEE
T ss_pred HHHHHhcC-----CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchhhhHHhCCCCcEE
Confidence 98886421 24788888888778999988 764 567899999999999986 211 00111122458977
Q ss_pred EEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 359 ITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 359 v~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+ +.|+||+ ...+|++++++++++.+.+
T Consensus 266 s--~sK~l~~-G~~~G~v~~~~~~~~~l~~ 292 (453)
T 2cy8_A 266 C--LAKASAG-GLPGGILGGREDVMGVLSR 292 (453)
T ss_dssp E--EEGGGGT-TSSCEEEEECHHHHTTSSS
T ss_pred E--EChhhhC-CcceEEEechHHHHHHhcc
Confidence 5 4599885 4569999999887766643
No 209
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=98.93 E-value=3.1e-09 Score=116.17 Aligned_cols=210 Identities=11% Similarity=0.044 Sum_probs=131.6
Q ss_pred CCceecccCCCCC------CcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGFGL------FSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAtgp------~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||+.+... .++.+++++.+ .+. .. ..++.|+ ....+.+++++++++ .++ .|+|
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~-------~~~-~~---~~~~~~~--~~~~~l~~~la~~~~-~~~--~v~~ 114 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGHANDRVVEALKA-------VAE-RG---TSFGAPT--EIENKLAKLVIERVP-SIE--IVRM 114 (429)
T ss_dssp TCCEEEESCGGGTTCTTCBSCHHHHHHHHH-------HHH-HC---SCCSSCC--HHHHHHHHHHHHHST-TCS--EEEE
T ss_pred CCCEEEECCCChhhcccCCCCHHHHHHHHH-------HHh-hC---cCcCCCC--HHHHHHHHHHHHhCC-CCC--EEEE
Confidence 4578999987642 47788887543 121 11 1233343 345678889999987 344 5999
Q ss_pred eCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHH----------HcC------cEEEEEeccCCCCccCHH
Q 002866 222 TVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAK----------EKG------AKVYSAWFKWPTLKLCST 284 (872)
Q Consensus 222 TsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~Ak----------rkG------aeV~~Vpvd~p~g~Id~e 284 (872)
|+|+|+|+.+++.... +..+++|++.....|........... ..| ..+..+|.+ +.+
T Consensus 115 ~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~ 188 (429)
T 3k28_A 115 VNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYN------DLE 188 (429)
T ss_dssp ESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETT------CHH
T ss_pred eCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCC------CHH
Confidence 9999999998776532 12345666543222322211100000 000 123333321 678
Q ss_pred HHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeeccccC---CCCCccCCCCCCCCc
Q 002866 285 DLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSLG---PKDMDSLGLSLFRPD 356 (872)
Q Consensus 285 dLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~a---G~~mipLDLs~l~~D 356 (872)
+|+++|.... .++.+|.+...++.+|.+.| ++. .+.|+++|+++++|-++.. |. +..++.....+|
T Consensus 189 ~le~~l~~~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~-~~~~~~~~~~~d 262 (429)
T 3k28_A 189 SVKYAFEQFG-----DDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAY-NCGQGYYGVTPD 262 (429)
T ss_dssp HHHHHHHHHG-----GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSST-THHHHHHTCCCS
T ss_pred HHHHHHHhCC-----CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccCc-chHHHHhCCCCc
Confidence 8988886421 24788888889999999999 874 5678999999999999852 11 011222234688
Q ss_pred EEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 357 FIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 357 Flv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
.+++| |.||+ ...+|++++++++++.+.+
T Consensus 263 i~t~s--K~~~~-G~~iG~~~~~~~~~~~~~~ 291 (429)
T 3k28_A 263 LTCLG--KVIGG-GLPVGAYGGKAEIMRQVAP 291 (429)
T ss_dssp EEEEC--GGGGT-TSCCEEEEECHHHHTTBTT
T ss_pred eehhh--hhhcC-CCCeEEEEEcHHHHhhhcc
Confidence 88776 98876 5679999999988777754
No 210
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=98.90 E-value=2.7e-09 Score=116.65 Aligned_cols=210 Identities=14% Similarity=0.040 Sum_probs=128.7
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++..|+|.++. +..++.+++++.+ .+ ... ..++.+. ....+.+++++++++ .++ .|+|
T Consensus 54 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~-------~~-~~~---~~~~~~~--~~~~~l~~~la~~~~-~~~--~v~~ 117 (434)
T 2epj_A 54 DGARIVDLVLAYGPLILGHKHPRVLEAVEE-------AL-ARG---WLYGAPG--EAEVLLAEKILGYVK-RGG--MIRF 117 (434)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHH-------HH-HTC---SCCSSCC--HHHHHHHHHHHHHHC-TTC--EEEE
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHH-------HH-HhC---CCCCCCC--HHHHHHHHHHHHhCC-CCC--EEEE
Confidence 34678898654 2356778777533 11 111 1233332 456778999999995 334 5999
Q ss_pred eCCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHHH----------HHcCc------EEEEEeccCCCCccCHH
Q 002866 222 TVSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQSA----------KEKGA------KVYSAWFKWPTLKLCST 284 (872)
Q Consensus 222 TsnATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~A----------krkGa------eV~~Vpvd~p~g~Id~e 284 (872)
|+|+|+|+.+++... .+..+++||+.....|.........+ ...|+ .+..+|. .+.+
T Consensus 118 ~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~ 191 (434)
T 2epj_A 118 VNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY------NDVE 191 (434)
T ss_dssp ESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET------TCHH
T ss_pred eCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC------CCHH
Confidence 999999999887751 12345676654322233211110000 01233 2444443 2688
Q ss_pred HHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeeccccCCCC---CccCCCCCCCCc
Q 002866 285 DLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSLGPKD---MDSLGLSLFRPD 356 (872)
Q Consensus 285 dLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~aG~~---mipLDLs~l~~D 356 (872)
+|+++|.... .++++|.+..+++.||.+.| ++. .+.|+++|+++++|.+|. |.. +..++.-...+|
T Consensus 192 ~le~~l~~~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~d 265 (434)
T 2epj_A 192 ALERVFAEYG-----DRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFRLGLEGAQGYFNIEGD 265 (434)
T ss_dssp HHHHHHHHHG-----GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTTSSTTHHHHHHTCCCS
T ss_pred HHHHHHHhCC-----CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ceeCCcchhhHHhCCCCC
Confidence 9998886421 24788888888888999998 874 567899999999999987 221 011111234689
Q ss_pred EEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 357 FIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 357 Flv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+++ +.|.+|. ...+|++++++++++.+.+
T Consensus 266 i~s--~sK~l~~-G~~~G~v~~~~~~~~~l~~ 294 (434)
T 2epj_A 266 IIV--LGKIIGG-GFPVGAVAGSREVMSLLTP 294 (434)
T ss_dssp EEE--EEGGGGT-TSSCEEEEECHHHHTTBTT
T ss_pred eee--ecchhcC-CcceeeeeecHHHHHhhcc
Confidence 864 5598874 2348999999887766653
No 211
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=98.87 E-value=5e-10 Score=123.85 Aligned_cols=158 Identities=15% Similarity=0.125 Sum_probs=113.3
Q ss_pred HHHHHHHHHHhcC------CCCCCCcEEEeCCHHHHHHHHHhhCC-------CCCCCeEEEecccCchhHHHHHHHHHHc
Q 002866 199 EHDIKTRIMDHLN------IPENEYGLVFTVSRGSAFKLLAESYP-------FHTNKKLLTMFDYESQSVNWMAQSAKEK 265 (872)
Q Consensus 199 ieeARerIA~lLg------A~~dEY~VVFTsnATeALnLVaeslp-------f~~Gd~ILT~~DhEHnSVl~~~~~Akrk 265 (872)
..+.|+.||++++ ++++ .|++|+|+|+|+++++.++. +++|+.|++..- .+. .+...++..
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~--~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P-~y~---~~~~~~~~~ 175 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDR--YIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAP-FYP---VFREQTKYF 175 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTC--EEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSS-CCH---HHHHHHHHS
T ss_pred hHHHHHHHHHHHHHhCCcCCCCC--EEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCC-Ccc---cHHHHHHHc
Confidence 4578999999987 5555 59999999999999999983 688999887632 233 334445667
Q ss_pred CcEEEEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHHHHHHCCcEEEeeccccCCCCC
Q 002866 266 GAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMALAQQNHWHVLLDAGSLGPKDM 345 (872)
Q Consensus 266 GaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~~Are~G~~VLVDAAQ~aG~~m 345 (872)
|+++.... ++.++|++++. +++++|.++..+|.||.++| +++ + ++..+.|.+.+-+..
T Consensus 176 g~~~~~~~-------~d~~~l~~~~~--------~~~k~v~l~~p~NPtG~~~~-~~l---~--~~~~i~d~~~~~~~~- 233 (427)
T 2hox_A 176 DKKGYVWA-------GNAANYVNVSN--------PEQYIEMVTSPNNPEGLLRH-AVI---K--GCKSIYDMVYYWPHY- 233 (427)
T ss_dssp CBTTEEEE-------EEGGGGTTCSC--------GGGEEEEEESSCTTTCCCCC-CSS---T--TCEEEEECTTCSTTT-
T ss_pred CCeeeeec-------CCHHHHHHhhc--------CCceEEEEcCCCCCcccccH-HHH---c--CCCEEEeecccCCCC-
Confidence 87765332 45566655443 24889999999999999999 643 2 567788877654321
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEe-CCCccccc
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDPTG--FGCLLIK-KSVMGSLQ 387 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~PtG--vG~LyVR-k~~i~~L~ 387 (872)
-.+.+. .+.|+++.|++|.|| +.| +|+++++ +++++.|.
T Consensus 234 s~~~~~-~~~~i~~~S~SK~~g--~~G~RiG~~~~~~~~l~~~l~ 275 (427)
T 2hox_A 234 TPIKYK-ADEDILLFTMSKFTG--HSGSRFGWALIKDESVYNNLL 275 (427)
T ss_dssp SCCCSC-BCCSEEEEEHHHHTS--CGGGCCEEEEECCHHHHHHHH
T ss_pred CccccC-CCceEEEEeChhcCC--CCCceEEEEEECCHHHHHHHH
Confidence 123333 578999999999998 458 8999995 66665554
No 212
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.86 E-value=3.9e-09 Score=119.46 Aligned_cols=173 Identities=8% Similarity=-0.079 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC--C-CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEe
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY--P-FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAW 273 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaesl--p-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vp 273 (872)
...+.+-..+++++|.+.. ...+|++++|.+.++.+-+. + ..+++.||+... .|-|+..-. .-.|++.++++
T Consensus 98 ~~e~~~~~~~~~~lGlp~~-~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~-aHkSv~kAl---~l~Gl~p~~v~ 172 (450)
T 3bc8_A 98 KITNSLVLNVIKLAGVHSV-ASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRI-DQKSCFKSM---VTAGFEPVVIE 172 (450)
T ss_dssp HHHHHHHHHHHHHHTCTTC-CEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECC-CCHHHHHHH---HHTTCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCC-ceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECC-cHHHHHHHH---HHcCCeeEEEE
Confidence 4556777788889998754 47799999996655543322 1 112567776644 677776433 33688888876
Q ss_pred cc--CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH-HHHHHHHCCcEEEeeccccCCCCCccCCC
Q 002866 274 FK--WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-WMALAQQNHWHVLLDAGSLGPKDMDSLGL 350 (872)
Q Consensus 274 vd--~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~I~~Are~G~~VLVDAAQ~aG~~mipLDL 350 (872)
.. ...+.++.++|+++|..+.. ..+.+|+.+.-.+-+|..-||+ +++.||++|+++|||+|+.+... ..-++
T Consensus 173 ~~~~~~~~~id~~~le~aI~~~~~----~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~-~~~~l 247 (450)
T 3bc8_A 173 NVLEGDELRTDLKAVEAKIQELGP----EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSS-KCMHL 247 (450)
T ss_dssp CEEETTEEECCHHHHHHHHHHHCG----GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCH-HHHHH
T ss_pred eeecCccCCcCHHHHHHHHHhcCC----CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhh-hhHhH
Confidence 52 23578999999999976420 1244455544444467999998 55788999999999999765321 11111
Q ss_pred --CCC---CCcEEEEcccccCCCCCCceEEEEEeC
Q 002866 351 --SLF---RPDFIITSFYRVFGFDPTGFGCLLIKK 380 (872)
Q Consensus 351 --s~l---~~DFlv~S~HK~fG~~PtGvG~LyVRk 380 (872)
+.+ ++|+++.|.|||++. |+|.++|++|.
T Consensus 248 ~~~a~~~~~AD~~v~S~HK~l~a-~~~~~~l~~rd 281 (450)
T 3bc8_A 248 IQQGARVGRIDAFVQSLDKNFMV-PVGGAIIAGFN 281 (450)
T ss_dssp HHHHHHHSCCCEEEEEHHHHHSC-CSSCEEEEESC
T ss_pred HHHHhcccCCCEEEECCccCCCc-hhccEEEEecC
Confidence 122 799999999999988 99999999973
No 213
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=98.84 E-value=1.4e-08 Score=110.59 Aligned_cols=219 Identities=11% Similarity=-0.025 Sum_probs=128.4
Q ss_pred CceecccCCC---CC---CcHHHHHHhhhcccccHHHHHHhhccCcCcCC-CchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDYCGF---GL---FSYIQTLHYWESSTFSLSEITANLSNHALYGG-AEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAt---gp---~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygN-psS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+.-|||+.+. .+ .++.+++++.+ .+ ..+ ..+.. ........+.+++++++++++++ .|+|
T Consensus 28 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~-------~~-~~~---~~~~~~~~~~~~~~~l~~~la~~~~~~~~--~v~~ 94 (430)
T 3i4j_A 28 GRRYLDGSSGALVANIGHGRAEVGERMAA-------QA-ARL---PFVHGSQFSSDVLEEYAGRLARFVGLPTF--RFWA 94 (430)
T ss_dssp SCEEEETTHHHHTCTTCBCCHHHHHHHHH-------HH-HHC---CCCCTTTCEEHHHHHHHHHHHHHTTCTTC--EEEE
T ss_pred CCEEEECCCchhccccCCCCHHHHHHHHH-------HH-Hhc---ccccccccCCHHHHHHHHHHHHhCCCCCC--EEEE
Confidence 4668998874 22 27788877533 12 111 11111 11124567888899999998766 5999
Q ss_pred eCCHHHHHHHHHhhCC-C------CCCCeEEEecccCchhHHHHHHHHHHcC---------c--EEEEEeccCC--CCcc
Q 002866 222 TVSRGSAFKLLAESYP-F------HTNKKLLTMFDYESQSVNWMAQSAKEKG---------A--KVYSAWFKWP--TLKL 281 (872)
Q Consensus 222 TsnATeALnLVaeslp-f------~~Gd~ILT~~DhEHnSVl~~~~~AkrkG---------a--eV~~Vpvd~p--~g~I 281 (872)
|+|+|+|+.+++..+. . ..++.||+....-|.............. . .+..+|.+.. .+..
T Consensus 95 ~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (430)
T 3i4j_A 95 VSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAE 174 (430)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHH
T ss_pred eCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhH
Confidence 9999999998776542 1 2356777653322332221111110000 0 2333343221 0123
Q ss_pred CHHHHHHHHhhhhccCCCCCceEEEEeCccC-cccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCC-
Q 002866 282 CSTDLRKQISSKKRRKKDSAAGLFVFPVQSR-VTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLS- 351 (872)
Q Consensus 282 d~edLe~~I~~~~rr~~~~~T~LVa~p~vSN-vTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs- 351 (872)
+.++|+++|.... ..++.+|.+...+| .+|.+.| ++. .+.|+++|+++++|-++. .+.. +..++.-
T Consensus 175 ~~~~le~~l~~~~----~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~ 250 (430)
T 3i4j_A 175 DAEGLRALLEREG----PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWS 250 (430)
T ss_dssp HHTHHHHHHHHHC----GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTT
T ss_pred HHHHHHHHHHhcC----CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhc
Confidence 5578888886420 12478888888889 9999888 764 567899999999999976 3221 1112222
Q ss_pred CCCCcEEEEcccccCCCCC-CceEEEEEeCCCccccc
Q 002866 352 LFRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 352 ~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~ 387 (872)
...+|.+++| |.||+ - -.+|++++++++++.+.
T Consensus 251 ~~~~di~t~s--K~l~~-G~~r~G~~~~~~~i~~~~~ 284 (430)
T 3i4j_A 251 GVTPDIAVLG--KGLAA-GYAPLAGLLAAPQVYETVM 284 (430)
T ss_dssp TCCCSEEEEC--GGGTT-TSSCCEEEEECHHHHHHHH
T ss_pred CCCCcEEEEc--ccccC-CccccEEEEECHHHHHHHh
Confidence 4468988877 98884 1 22799999888777665
No 214
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=98.84 E-value=6.4e-08 Score=104.57 Aligned_cols=164 Identities=10% Similarity=0.059 Sum_probs=111.6
Q ss_pred HHHHHHHHHhc-CCC-----CCCCcEE--EeCCHHHHHHHHHhhC--CCCCCCeEEEecccCchhHHHHHHHHHHcCcEE
Q 002866 200 HDIKTRIMDHL-NIP-----ENEYGLV--FTVSRGSAFKLLAESY--PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKV 269 (872)
Q Consensus 200 eeARerIA~lL-gA~-----~dEY~VV--FTsnATeALnLVaesl--pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV 269 (872)
.+.|+.|++++ |.. ++ .|. .|.++|+|+.++...+ -.++||.|++..- .|... ...++..|+++
T Consensus 82 ~~lr~~ia~~~~~~~~~~~~~~--~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p-~y~~~---~~~~~~~g~~~ 155 (409)
T 4eu1_A 82 ASFVEEAQKLCFGPTCAALRDG--RIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDV-GYPNH---ESIFAKAGMEL 155 (409)
T ss_dssp HHHHHHHHHHHHCSSCHHHHTT--CEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESS-CCTHH---HHHHHHTTCEE
T ss_pred HHHHHHHHHHHcCCCchhhccC--ceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCC-CcHhH---HHHHHHcCCeE
Confidence 47899999976 665 44 474 4999999998764322 1367899887632 23333 44556689999
Q ss_pred EEEecc-CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHH----HHHHHHCCcEEEeecccc-CCC
Q 002866 270 YSAWFK-WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALAQQNHWHVLLDAGSL-GPK 343 (872)
Q Consensus 270 ~~Vpvd-~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ~-aG~ 343 (872)
..+|++ ..+..++.++|++.+... ..+++++.++..+|.||.++|.+. ++.|+++|+++++|.+.. ...
T Consensus 156 ~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~ 230 (409)
T 4eu1_A 156 TPYSYYDPATKGLNLAGMLECLDKA-----PEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFAT 230 (409)
T ss_dssp EEECCEETTTTEECHHHHHHHHHHS-----CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTT
T ss_pred EEEEeecCcCCcCcHHHHHHHHHhC-----CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccccccc
Confidence 999873 234678999999998642 124778888999999999999753 456799999999999943 222
Q ss_pred CC-----ccC-CC-CCCCCcEEEEcccccCCCCCCc--eEEE
Q 002866 344 DM-----DSL-GL-SLFRPDFIITSFYRVFGFDPTG--FGCL 376 (872)
Q Consensus 344 ~m-----ipL-DL-s~l~~DFlv~S~HK~fG~~PtG--vG~L 376 (872)
.- .++ .+ ....-.+++.|+.|.||. .| +|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~--~G~riG~~ 270 (409)
T 4eu1_A 231 GQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGL--YGHRCGAL 270 (409)
T ss_dssp SCHHHHTHHHHHHHTTSSCCEEEEECTTTSSC--GGGCCEEE
T ss_pred CCcccchHHHHHHHhhCCcEEEEecCcccccC--ccCCceEE
Confidence 10 000 01 112234677899999983 46 6776
No 215
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=98.83 E-value=6.3e-08 Score=109.38 Aligned_cols=171 Identities=11% Similarity=0.077 Sum_probs=113.4
Q ss_pred HHHHHHHHHhc-----CCCCCCCcEEEeCCHHHHHHHHHhhCCCCCCC----eEEEecccCchhHHHHHHHHHHcCcEEE
Q 002866 200 HDIKTRIMDHL-----NIPENEYGLVFTVSRGSAFKLLAESYPFHTNK----KLLTMFDYESQSVNWMAQSAKEKGAKVY 270 (872)
Q Consensus 200 eeARerIA~lL-----gA~~dEY~VVFTsnATeALnLVaeslpf~~Gd----~ILT~~DhEHnSVl~~~~~AkrkGaeV~ 270 (872)
..+|+.||+++ |.+.+..+|++|+|+|+|+.+++..+. .+|+ .|++.. -.|... ...++..|+++.
T Consensus 132 ~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~~~d~Vlv~~-p~y~~~---~~~~~~~g~~~v 206 (498)
T 3ihj_A 132 NCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILV-SGGGKSRTGVMIPI-PQYPLY---SAVISELDAIQV 206 (498)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHC-CCCGGGSEEEEEEE-SCCTHH---HHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHc-CCCCCCCCEEEEeC-CCchhH---HHHHHHcCCEEE
Confidence 45777777776 453222369999999999999999874 4553 776653 233433 344566799999
Q ss_pred EEeccCC-CCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHH----HHHHHHHCCcEEEeeccccCCC-C
Q 002866 271 SAWFKWP-TLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ----WMALAQQNHWHVLLDAGSLGPK-D 344 (872)
Q Consensus 271 ~Vpvd~p-~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe----~I~~Are~G~~VLVDAAQ~aG~-~ 344 (872)
.++++.. +..++.++|+++|...+ ...++++|++...+|.||.++|.+ +++.|+++++++++|.+..... +
T Consensus 207 ~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~ 283 (498)
T 3ihj_A 207 NYYLDEENCWALNVNELRRAVQEAK---DHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYS 283 (498)
T ss_dssp EEECBGGGTTBCCHHHHHHHHHHHT---TTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCC
T ss_pred EeeccccccCCCCHHHHHHHHHhhh---ccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccC
Confidence 9998743 23679999999997531 112488999999999999999975 3456789999999999964321 0
Q ss_pred --CccCCCCCC----C------Cc-EEEEcccccC-CCCCCceEEEEE
Q 002866 345 --MDSLGLSLF----R------PD-FIITSFYRVF-GFDPTGFGCLLI 378 (872)
Q Consensus 345 --mipLDLs~l----~------~D-Flv~S~HK~f-G~~PtGvG~LyV 378 (872)
.....+..+ + +. +++.|++|.| |.+-..+|++++
T Consensus 284 ~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~ 331 (498)
T 3ihj_A 284 PDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEV 331 (498)
T ss_dssp TTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEE
T ss_pred CCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEE
Confidence 001112111 1 12 5677999998 521123566553
No 216
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=98.81 E-value=2.6e-08 Score=109.65 Aligned_cols=218 Identities=9% Similarity=0.029 Sum_probs=131.2
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+.-|||..+. +..++.+++++.+ .+ ..+. +...+.+ .....+.+++++++++.+.+ |+||
T Consensus 48 g~~~lD~~~~~~~~~lG~~~p~v~~A~~~-------~~-~~~~-~~~~~~~--~~~~~~la~~l~~~~~~~~~---v~~~ 113 (452)
T 3n5m_A 48 GKRYLDGMSGLWCVNSGYGRKELAEAAYK-------QL-QTLS-YFPMSQS--HEPAIKLAEKLNEWLGGEYV---IFFS 113 (452)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHH-------HH-TTCC-CCCTTSE--EHHHHHHHHHHHHHHTSCEE---EEEE
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHH-------HH-HhcC-CcccccC--CHHHHHHHHHHHHhCCCCce---EEEe
Confidence 4678998766 2246778877533 11 1110 1011112 25667889999999987543 9999
Q ss_pred CCHHHHHHHHHhhCC-C---C---CCCeEEEecccCchhHHHHHHHHH----Hc-----CcEEEEEeccCCCCcc-----
Q 002866 223 VSRGSAFKLLAESYP-F---H---TNKKLLTMFDYESQSVNWMAQSAK----EK-----GAKVYSAWFKWPTLKL----- 281 (872)
Q Consensus 223 snATeALnLVaeslp-f---~---~Gd~ILT~~DhEHnSVl~~~~~Ak----rk-----GaeV~~Vpvd~p~g~I----- 281 (872)
+|+|+|+..++.... + . ++++|++....-|........... +. ...+..++.... .+.
T Consensus 114 ~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 192 (452)
T 3n5m_A 114 NSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDC-YRMPGIER 192 (452)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCT-TTSTTTTT
T ss_pred CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcc-ccCccCCc
Confidence 999999998776532 1 2 466777654322333222111000 00 012444443110 111
Q ss_pred -------CHHHHHHHHhhhhccCCCCCceEEEEeCc-cCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--C
Q 002866 282 -------CSTDLRKQISSKKRRKKDSAAGLFVFPVQ-SRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--M 345 (872)
Q Consensus 282 -------d~edLe~~I~~~~rr~~~~~T~LVa~p~v-SNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--m 345 (872)
+.++|+++|... ...++++|.+... +| +|.+.| ++. .+.|+++|+++++|-+|. .|.. +
T Consensus 193 ~~~~~~~~~~~le~~l~~~----~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~ 267 (452)
T 3n5m_A 193 ENIYDVECVKEVDRVMTWE----LSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKA 267 (452)
T ss_dssp SCGGGCHHHHHHHHHHHHH----CGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred hhhHHHHHHHHHHHHHHhc----CCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCccccc
Confidence 168888888621 1125788888888 89 999998 774 467899999999999976 3220 1
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
..++.....+|++++| |.+|+.+..+|++++++++++.+.+
T Consensus 268 ~~~~~~~~~~di~t~s--K~l~~G~~~ig~~~~~~~i~~~~~~ 308 (452)
T 3n5m_A 268 FGFMNYDVKPDIITMA--KGITSAYLPLSATAVKREIYEAFKG 308 (452)
T ss_dssp SGGGGTTCCCSEEEEC--GGGGTTSSCCEEEEEEHHHHGGGCS
T ss_pred chhhhcCCCCCEEeec--ccccCCCcceEEEEECHHHHHHHhh
Confidence 2233344568988876 8776412568999999988776653
No 217
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=98.81 E-value=8.8e-09 Score=118.22 Aligned_cols=156 Identities=15% Similarity=0.103 Sum_probs=108.4
Q ss_pred cEEEeCCHHHHHHHHHhhC----CCCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEeccCCC-CccCHHHHHHHHhh
Q 002866 218 GLVFTVSRGSAFKLLAESY----PFHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFKWPT-LKLCSTDLRKQISS 292 (872)
Q Consensus 218 ~VVFTsnATeALnLVaesl----pf~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd~p~-g~Id~edLe~~I~~ 292 (872)
.|++|+|+++|+.+++..+ -..+||.|++..- .+........ ....|+++..++.+..+ ..++.++|++++.
T Consensus 167 ~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P-~y~~~~~~~~-~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~- 243 (546)
T 2zy4_A 167 NLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMP-VFTPYIEIPE-LAQYALEEVAINADPSLNWQYPDSELDKLKD- 243 (546)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEES-CCHHHHHHHH-STTSCCEEEEEECBGGGTTBCCHHHHGGGGS-
T ss_pred eEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCC-CCccHHHHHH-HcCCCcEEEEEecCcccCCCCCHHHHHHhhC-
Confidence 6999999999999998873 2468999876532 2333322211 23357999999886432 3478888866542
Q ss_pred hhccCCCCCceEEEEeCccCcccchhcHHH----HHHH--HHCCcEEEeeccccCCCCCccCCCCC--CCCcEEEEcccc
Q 002866 293 KKRRKKDSAAGLFVFPVQSRVTGAKYSYQW----MALA--QQNHWHVLLDAGSLGPKDMDSLGLSL--FRPDFIITSFYR 364 (872)
Q Consensus 293 ~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~----I~~A--re~G~~VLVDAAQ~aG~~mipLDLs~--l~~DFlv~S~HK 364 (872)
+++++|.++..+|.||.++|.+. ++.| +++|+.+++|.++..... ....+.. .+.++++.|+.|
T Consensus 244 -------~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~-~~~s~~~~~~~~~i~~~S~SK 315 (546)
T 2zy4_A 244 -------PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFAD-DFQSLFAICPENTLLVYSFSK 315 (546)
T ss_dssp -------TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGST-TCCCHHHHCGGGEEEEEESTT
T ss_pred -------CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcc-cCcCHHHhCCCCEEEEEeCcc
Confidence 35889999999999999999753 4556 678999999999753210 1112211 146799999999
Q ss_pred cCCCCCCc--eEEEEEeCC-Ccccc
Q 002866 365 VFGFDPTG--FGCLLIKKS-VMGSL 386 (872)
Q Consensus 365 ~fG~~PtG--vG~LyVRk~-~i~~L 386 (872)
.||. .| +|++++.+. +++.+
T Consensus 316 ~~g~--~GlRiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 316 YFGA--TGWRLGVVAAHQQNVFDLA 338 (546)
T ss_dssp TTTC--GGGCEEEEEEESSCHHHHH
T ss_pred ccCC--CCcceEEEEECCHHHHHHH
Confidence 9984 47 799999886 55544
No 218
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=98.75 E-value=6.5e-08 Score=107.16 Aligned_cols=219 Identities=11% Similarity=0.017 Sum_probs=132.2
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhc-cCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLS-NHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~-~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+..|||..+. +..++.+++++.+ .+. .+. .+..++.+ .....+.+++++++++.+.+ .|+|
T Consensus 49 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~-------~~~-~~~~~~~~~~~~--~~~~~~la~~l~~~~~~~~~--~v~~ 116 (459)
T 4a6r_A 49 GNKIIDGMAGLWCVNVGYGRKDFAEAARR-------QME-ELPFYNTFFKTT--HPAVVELSSLLAEVTPAGFD--RVFY 116 (459)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHH-------HHH-HCSCCCTTSSSC--CHHHHHHHHHHHHHSCTTCC--EEEE
T ss_pred CCEEEECCCchhcccCCCCCHHHHHHHHH-------HHH-hccccccccccC--CHHHHHHHHHHHHhCCCCCC--EEEE
Confidence 4679998764 2346778887543 121 111 01111222 24567888999999988765 5999
Q ss_pred eCCHHHHHHHHHhhCCC-------CCCCeEEEecccCchhHHHHHHHH---------HHcCcEEEEEeccC----CCCcc
Q 002866 222 TVSRGSAFKLLAESYPF-------HTNKKLLTMFDYESQSVNWMAQSA---------KEKGAKVYSAWFKW----PTLKL 281 (872)
Q Consensus 222 TsnATeALnLVaeslpf-------~~Gd~ILT~~DhEHnSVl~~~~~A---------krkGaeV~~Vpvd~----p~g~I 281 (872)
|+|+|+|+..++..+.. ..++.||+....-|.......... ......+..+++.. +.. +
T Consensus 117 ~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~ 195 (459)
T 4a6r_A 117 TNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-M 195 (459)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-C
T ss_pred eCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-c
Confidence 99999999887765421 135667765432243332211110 00011344454322 111 2
Q ss_pred C--------HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--C
Q 002866 282 C--------STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--M 345 (872)
Q Consensus 282 d--------~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--m 345 (872)
+ .++|+++|.... ..++.+|.+..+++.+|.+.| ++. .+.|+++|+++++|-++. .|.. +
T Consensus 196 d~~~~~~~~~~~le~~i~~~~----~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~ 271 (459)
T 4a6r_A 196 TPDEFGVVAARWLEEKILEIG----ADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEW 271 (459)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC----GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred CHHHHHHHHHHHHHHHHHHcC----CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc
Confidence 3 677888776321 124788888888999999998 764 567899999999999976 3221 1
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCC-CceEEEEEeCCCccccc
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~ 387 (872)
..++.....+|++++| |.+++ . ..+|++++++++++.+.
T Consensus 272 ~~~~~~~~~pdi~t~s--K~l~g-g~~~lg~v~~~~~i~~~~~ 311 (459)
T 4a6r_A 272 FGHQHFGFQPDLFTAA--KGLSS-GYLPIGAVFVGKRVAEGLI 311 (459)
T ss_dssp SHHHHHTCCCSEEEEC--GGGGT-TSSCCEEEEECHHHHHHHH
T ss_pred chHhhcCCCCCeeehh--hhhcC-CCCCccceeeCHHHHHHhh
Confidence 1122234578999887 97764 2 35799999888776654
No 219
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=98.73 E-value=3.7e-08 Score=110.00 Aligned_cols=220 Identities=10% Similarity=0.038 Sum_probs=133.4
Q ss_pred CCc--eecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcE
Q 002866 148 SPK--VCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGL 219 (872)
Q Consensus 148 ~~~--IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~V 219 (872)
++. -|||..+. +..++.+++++.+ .+ ..+. +..+ +........+.+++++++++.+.+ .|
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~-------~~-~~~~-~~~~-~~~~~~~~~~L~e~la~~~~~~~~--~v 138 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTT-------QL-RVMN-HVMF-GGLTHEPAARLAKLLVDITPAGLD--TV 138 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHH-------HH-HHCS-CCCS-SSEECHHHHHHHHHHHHHSSTTEE--EE
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHH-------HH-Hhcc-Cccc-cccCCHHHHHHHHHHHHhCCCCcC--EE
Confidence 456 89998764 3347788887543 12 1211 1111 111124567899999999987665 59
Q ss_pred EEeCCHHHHHHHHHhhCC-C-----CCCC-eEEEecccCchhHHHHHHH----------HHHcCcEEEEEeccCCC-Ccc
Q 002866 220 VFTVSRGSAFKLLAESYP-F-----HTNK-KLLTMFDYESQSVNWMAQS----------AKEKGAKVYSAWFKWPT-LKL 281 (872)
Q Consensus 220 VFTsnATeALnLVaeslp-f-----~~Gd-~ILT~~DhEHnSVl~~~~~----------AkrkGaeV~~Vpvd~p~-g~I 281 (872)
+||+|+|+|+.+++.... + ++|+ .||+....-|......... .......+..+++.... ...
T Consensus 139 ~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 218 (457)
T 3tfu_A 139 FFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPA 218 (457)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHH
T ss_pred EEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHH
Confidence 999999999998766532 1 1344 5665433223332221110 01111233444442211 113
Q ss_pred CHHHHHHHHhhhhccCCCCCceEEEEeC-ccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--CccCCCCC
Q 002866 282 CSTDLRKQISSKKRRKKDSAAGLFVFPV-QSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLGLSL 352 (872)
Q Consensus 282 d~edLe~~I~~~~rr~~~~~T~LVa~p~-vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~ 352 (872)
+.++|+++|.... .++.+|.+.. ++|.+|.+.| ++. .+.|+++|+++++|-+|. .|.. +..++...
T Consensus 219 d~~~le~~l~~~~-----~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~ 293 (457)
T 3tfu_A 219 YSAAFEAQLAQHA-----GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAG 293 (457)
T ss_dssp HHHHHHHHHHHHG-----GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHT
T ss_pred HHHHHHHHHHhCC-----CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcC
Confidence 6778888886421 2578898888 9999999997 764 467899999999999976 3220 11222234
Q ss_pred CCCcEEEEcccccCCCCC-CceEEEEEeCCCccccc
Q 002866 353 FRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 353 l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~ 387 (872)
..+|++++| |.+|+ . ..+|+++.++++++.+.
T Consensus 294 ~~pdiit~s--K~l~g-G~~~lG~v~~~~~i~~~~~ 326 (457)
T 3tfu_A 294 VSPDIMCVG--KALTG-GYLSLAATLCTADVAHTIS 326 (457)
T ss_dssp CCCSEEEEC--GGGGT-TSSCCEEEEEEHHHHHHHH
T ss_pred CCceEEEEC--hhhhC-CCcceEEEEEcHHHHHHhh
Confidence 578998666 87774 2 25899999998877763
No 220
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=98.71 E-value=3.2e-07 Score=102.81 Aligned_cols=208 Identities=10% Similarity=0.044 Sum_probs=118.3
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++..|||+.+. +..++.+++++.+. +.... ......|++....+..+.+.++++++++...+ .|+|
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~----~~~~~--~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~~--~v~f 132 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGYSHPALVKLVQQP----QNVST--FINRPALGILPPENFVEKLRESLLSVAPKGMS--QLIT 132 (472)
T ss_dssp TSCEEEESSHHHHTCSSCBTCHHHHHHHHCG----GGHHH--HHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCC--EEEE
T ss_pred CCCEEEECCCCHhhcccCCCCHHHHHHHHHH----Hhhcc--cccccccccccHHHHHHHHHHHHHHhCCCCcC--EEEE
Confidence 45789998553 44578888886541 11110 11112345432223444444445556654444 5999
Q ss_pred eCCHHHHHHHHHhhCC------------C------------CCC---CeEEEecccCchhHHHHHHHH-----HHcCcEE
Q 002866 222 TVSRGSAFKLLAESYP------------F------------HTN---KKLLTMFDYESQSVNWMAQSA-----KEKGAKV 269 (872)
Q Consensus 222 TsnATeALnLVaeslp------------f------------~~G---d~ILT~~DhEHnSVl~~~~~A-----krkGaeV 269 (872)
|.++|+|+..++.... + ++| ++||+....-|.......... +..|..+
T Consensus 133 ~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~ 212 (472)
T 1ohv_A 133 MACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPS 212 (472)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCC
T ss_pred eCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCC
Confidence 9999999887665431 1 135 677766444455444333221 1223221
Q ss_pred ---EEEeccCCCC-------------ccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHH
Q 002866 270 ---YSAWFKWPTL-------------KLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQ 328 (872)
Q Consensus 270 ---~~Vpvd~p~g-------------~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are 328 (872)
..+++..... ..+.++|+++|..... ...++++|++..++|++|.++| ++. .+.|++
T Consensus 213 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~--~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~ 290 (472)
T 1ohv_A 213 FDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRK--KKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRK 290 (472)
T ss_dssp CCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHH
T ss_pred CCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCC--CCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHH
Confidence 2233321000 1246777777764210 0125899999888899999888 764 467899
Q ss_pred CCcEEEeecccc-CCCCCccCCCCCCC----CcEEEEccccc-CC
Q 002866 329 NHWHVLLDAGSL-GPKDMDSLGLSLFR----PDFIITSFYRV-FG 367 (872)
Q Consensus 329 ~G~~VLVDAAQ~-aG~~mipLDLs~l~----~DFlv~S~HK~-fG 367 (872)
+|+++++|.+|. .|..-..+.+..++ ||++++| |. +|
T Consensus 291 ~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~l~ 333 (472)
T 1ohv_A 291 HGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMMT 333 (472)
T ss_dssp TTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEEC--GGGSS
T ss_pred hCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEc--ccccc
Confidence 999999999997 44310113444444 8999888 97 44
No 221
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=98.71 E-value=1e-07 Score=105.70 Aligned_cols=220 Identities=13% Similarity=0.057 Sum_probs=132.6
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhcc-CcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSN-HALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~-~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+.-|||..+. +..++.+++++.+ .+. .+.. +..++.++ ....+.+++++++++.+.+ .|+|
T Consensus 50 G~~~lD~~~~~~~~~lG~~~p~v~~A~~~-------~~~-~~~~~~~~~~~~~--~~~~~la~~l~~~~~~~~~--~v~~ 117 (460)
T 3gju_A 50 GRKSIDAFAGLYCVNVGYGRQKIADAIAT-------QAK-NLAYYHAYVGHGT--EASITLAKMIIDRAPKGMS--RVYF 117 (460)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHH-------HHH-HHSCCCCCTTCCC--HHHHHHHHHHHHHSCTTEE--EEEE
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHH-------HHH-hccccccccccCC--HHHHHHHHHHHhhCCCCcC--EEEE
Confidence 4678998755 2346778887543 121 1110 11112222 4566788999999877665 5999
Q ss_pred eCCHHHHHHHHHhhCCC-------CCCCeEEEecccCchhHHHHHHHH---------HHcCcEEEEEeccC----CCCcc
Q 002866 222 TVSRGSAFKLLAESYPF-------HTNKKLLTMFDYESQSVNWMAQSA---------KEKGAKVYSAWFKW----PTLKL 281 (872)
Q Consensus 222 TsnATeALnLVaeslpf-------~~Gd~ILT~~DhEHnSVl~~~~~A---------krkGaeV~~Vpvd~----p~g~I 281 (872)
|+|+|+|+..++..+.- ..++.|++....-|.......... ...+..+..+++.. ++..+
T Consensus 118 ~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~ 197 (460)
T 3gju_A 118 GLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSM 197 (460)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTC
T ss_pred eCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCcccc
Confidence 99999999887765421 134667665433344332221110 00112345555332 11112
Q ss_pred C--------HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--C
Q 002866 282 C--------STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--M 345 (872)
Q Consensus 282 d--------~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--m 345 (872)
+ .++|+++|... ...++.+|.+..++|.+|.+.| ++. .+.|+++|+++++|-++. .|.. +
T Consensus 198 ~~~~~~~~~~~~le~~i~~~----~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~ 273 (460)
T 3gju_A 198 SEEQFSQHCADKLEEMILAE----GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTM 273 (460)
T ss_dssp CHHHHHHHHHHHHHHHHHHH----CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred ChhHHHHHHHHHHHHHHHhc----CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc
Confidence 2 47788877632 1124788999999999999887 764 467899999999999976 4321 1
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCC-CceEEEEEeCCCccccc
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~ 387 (872)
..++.....+|.+++| |.+++ . ..+|++++++++++.+.
T Consensus 274 ~~~~~~~~~pdi~t~s--K~l~g-G~~~lg~v~~~~~i~~~~~ 313 (460)
T 3gju_A 274 FGSDHYGIKPDLITIA--KGLTS-AYAPLSGVIVADRVWQVLV 313 (460)
T ss_dssp CHHHHHTCCCSEEEEC--GGGTT-TSSCCEEEEEEHHHHHHHH
T ss_pred chHhhcCCCCCeeeee--hhhcC-CCCCeEEEEECHHHHHHHh
Confidence 1122223568998887 98875 2 24699999988776664
No 222
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=98.71 E-value=2.5e-08 Score=108.71 Aligned_cols=208 Identities=11% Similarity=0.054 Sum_probs=126.5
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+..|+|.++. ++.++.+++++.+ .+ ... ..++.+. ....+.+++++++++ .++ .|+||
T Consensus 51 g~~~iD~~~~~~~~~lG~~~p~v~~a~~~-------~~-~~~---~~~~~~~--~~~~~l~~~l~~~~~-~~~--~v~~~ 114 (424)
T 2e7u_A 51 GNRYLDYVMSWGPLILGHAHPKVLARVRE-------TL-ERG---LTFGAPS--PLEVALAKKVKRAYP-FVD--LVRFV 114 (424)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHH-------HH-HTC---SCCSSCC--HHHHHHHHHHHHHCT-TCC--EEEEE
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHH-------HH-HhC---CCCCCCC--HHHHHHHHHHHHhCC-CCC--EEEEe
Confidence 4668888753 3356778877533 11 111 1233333 456788899999986 444 59999
Q ss_pred CCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHH----------HHcCc------EEEEEeccCCCCccCHHH
Q 002866 223 VSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSA----------KEKGA------KVYSAWFKWPTLKLCSTD 285 (872)
Q Consensus 223 snATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~A----------krkGa------eV~~Vpvd~p~g~Id~ed 285 (872)
+|+|+|+.+++.. ..+..++.||+....-|.........+ ...|+ .+..+|. .+.++
T Consensus 115 ~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~ 188 (424)
T 2e7u_A 115 NSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY------NDPEG 188 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT------TCHHH
T ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC------CCHHH
Confidence 9999999987764 112234666655322233211110000 00132 2444442 26888
Q ss_pred HHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeeccccCCCC---CccCCCCCCCCcE
Q 002866 286 LRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSLGPKD---MDSLGLSLFRPDF 357 (872)
Q Consensus 286 Le~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~aG~~---mipLDLs~l~~DF 357 (872)
|+++|.... .++++|.+..+++.||.+.| ++. .+. +++|+++++|.+|. |.. +..++.-...+|+
T Consensus 189 le~~l~~~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di 261 (424)
T 2e7u_A 189 LREVLKRRG-----EEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GFRLAFGGATELLGLKPDL 261 (424)
T ss_dssp HHHHHHHHG-----GGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TTTSSTTHHHHHHTCCCSE
T ss_pred HHHHHHhCC-----CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-ccccchhHHHHHhCCCcch
Confidence 988886421 14678888777777999988 764 456 88999999999987 211 0011112245887
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 358 IITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 358 lv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+ |+.|.||+ ...+|++++++++++.+.+
T Consensus 262 ~--s~sK~l~~-G~~~G~~~~~~~~~~~~~~ 289 (424)
T 2e7u_A 262 V--TLGKILGG-GLPAAAYAGRREIMEKVAP 289 (424)
T ss_dssp E--EECGGGGT-TSSCEEEEECHHHHTTBTT
T ss_pred h--hhhhhhhC-CcceEEEEEcHHHHhhhcc
Confidence 6 55699885 3458999999887776654
No 223
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=98.66 E-value=2.2e-07 Score=102.54 Aligned_cols=218 Identities=9% Similarity=0.021 Sum_probs=126.1
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCc-CCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALY-GGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~y-gNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+.-|||..+. +..++.+++++.+ .+ ..+ ..+ .+........+.+++++++++...+ .|+|
T Consensus 43 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~-------~~-~~~---~~~~~~~~~~~~~~~la~~l~~~~~~~~~--~v~~ 109 (448)
T 3dod_A 43 GKEYYDGFSSVWLNVHGHRKKELDDAIKK-------QL-GKI---AHSTLLGMTNVPATQLAETLIDISPKKLT--RVFY 109 (448)
T ss_dssp SCEEEETTHHHHTCSSCBSCHHHHHHHHH-------HH-TTC---SCCCCSSSEEHHHHHHHHHHHHHSCTTEE--EEEE
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHH-------HH-Hhc---cCccccccCCHHHHHHHHHHHHhCCCCCC--EEEE
Confidence 4678998763 2346778777533 11 111 111 1111124566788999999976554 5999
Q ss_pred eCCHHHHHHHHHhhCCC---CC----CCeEEEecccCchhHHHHHHHHHH----c-----CcEEEEEeccCCCCc-----
Q 002866 222 TVSRGSAFKLLAESYPF---HT----NKKLLTMFDYESQSVNWMAQSAKE----K-----GAKVYSAWFKWPTLK----- 280 (872)
Q Consensus 222 TsnATeALnLVaeslpf---~~----Gd~ILT~~DhEHnSVl~~~~~Akr----k-----GaeV~~Vpvd~p~g~----- 280 (872)
|+|+|+|+.+++....- .+ +++|++....-|............ . ...+..+|.... .+
T Consensus 110 ~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 188 (448)
T 3dod_A 110 SDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYV-YRSESGD 188 (448)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCC-TTSSSCC
T ss_pred eCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCcc-ccCCccc
Confidence 99999999987765421 13 377776533223322211111000 0 122344444321 11
Q ss_pred ------cCHHHHHHHHhhhhccCCCCCceEEEEeCcc-Ccccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--C
Q 002866 281 ------LCSTDLRKQISSKKRRKKDSAAGLFVFPVQS-RVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--M 345 (872)
Q Consensus 281 ------Id~edLe~~I~~~~rr~~~~~T~LVa~p~vS-NvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--m 345 (872)
.+.++|+++|.... .++.+|.+..+. |.+|.+.| ++. .+.|+++|+++++|-++. .|.. +
T Consensus 189 ~~~~~~~d~~~le~~l~~~~-----~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~ 263 (448)
T 3dod_A 189 PDECRDQCLRELAQLLEEHH-----EEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKM 263 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-----GGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred hhhhhHHHHHHHHHHHHhCC-----CCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccch
Confidence 13678888886321 246778888887 99998887 764 567899999999999976 3210 1
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCC-CceEEEEEeCCCcccccC
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~P 388 (872)
..++.....+|.+++| |.+|+ . ..+|+++.++++++.+.+
T Consensus 264 ~a~~~~~~~~di~t~s--K~l~~-G~~~ig~v~~~~~~~~~~~~ 304 (448)
T 3dod_A 264 FACEHENVQPDLMAAG--KGITG-GYLPIAVTFATEDIYKAFYD 304 (448)
T ss_dssp SGGGGGTCCCSEEEEC--GGGGT-TSSCCEEEEEEHHHHHTTCS
T ss_pred hhhhhcCCCCCEEEec--ccccC-CcCceEEEEECHHHHHHhhh
Confidence 1233334568988877 98874 3 256999999887776653
No 224
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=98.62 E-value=5.2e-07 Score=100.03 Aligned_cols=223 Identities=10% Similarity=0.003 Sum_probs=130.2
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCC-CchHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGG-AEKGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygN-psS~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++..|||+.+. +..++.+++++.+ .+ ..+ ..+.. ........+.+++++++++.... ..|+
T Consensus 59 ~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~-------~~-~~~---~~~~~~~~~~~~~~~la~~l~~~~~~~~~-~~v~ 126 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGNSAPKVVEAVRS-------QV-GDF---THTCFMVTPYEGYVAVCEQLNRLTPVRGD-KRSA 126 (451)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHH-------HH-TTC---SCCTTTTSCCHHHHHHHHHHHHHSSCCSS-EEEE
T ss_pred CCCEEEEcCCCccccccCCCCHHHHHHHHH-------HH-Hhc---ccccCCccCCHHHHHHHHHHHHhCCcCCC-CEEE
Confidence 34679998864 2347778777533 11 111 11111 11124556788899999875421 2699
Q ss_pred EeCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHH-----HHcC-----cEEEEEeccCCC-----------
Q 002866 221 FTVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSA-----KEKG-----AKVYSAWFKWPT----------- 278 (872)
Q Consensus 221 FTsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~A-----krkG-----aeV~~Vpvd~p~----------- 278 (872)
||+|+|+|+.+++.... +..++.|++....-|.......... .+.+ ..+..+|+..+.
T Consensus 127 ~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 206 (451)
T 3oks_A 127 LFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELAT 206 (451)
T ss_dssp EESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTT
T ss_pred EeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccch
Confidence 99999999998765432 1223566655433344333222110 0011 145666654110
Q ss_pred -CccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--CccCC
Q 002866 279 -LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--MDSLG 349 (872)
Q Consensus 279 -g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--mipLD 349 (872)
...+.+.+.+.|.... ...++.+|.+..+++..|.+.| ++. .+.|+++|+++++|-+|. .+.. +..++
T Consensus 207 ~~~~~~~~~~~~l~~~~---~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~ 283 (451)
T 3oks_A 207 DGELAAKRAITVIDKQI---GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACE 283 (451)
T ss_dssp CHHHHHHHHHHHHHHHT---CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGG
T ss_pred hhHHHHHHHHHHHHhhc---CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhh
Confidence 0012333444444211 1124788888888889999988 874 567899999999999976 3210 11223
Q ss_pred CCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 350 LSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 350 Ls~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
.....+|.+++| |.+|. ...+|+++.++++++.+.+
T Consensus 284 ~~~~~pdi~t~s--K~l~~-G~~iG~v~~~~~~~~~~~~ 319 (451)
T 3oks_A 284 HEGIDPDLIVTA--KGIAG-GLPLSAVTGRAEIMDSPHV 319 (451)
T ss_dssp GGTCCCSEEEEC--GGGGT-TSSCEEEEEEHHHHTCSCT
T ss_pred hcCCCCCeeeeh--hhhhC-CcceEEEEECHHHHhhhcC
Confidence 334568988776 98875 3458999999988777764
No 225
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=98.61 E-value=2.9e-07 Score=102.21 Aligned_cols=222 Identities=9% Similarity=-0.028 Sum_probs=129.1
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcC-CCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYG-GAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~yg-NpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+.-|||+.+. +..++.+++++.+ .+. .+. .+. +........+.+++++++++.+..+ .|+|
T Consensus 63 G~~ylD~~~~~~~~~lGh~~p~v~~A~~~-------~~~-~~~---~~~~~~~~~~~~~~la~~l~~~~~~~~~~-~v~~ 130 (453)
T 4ffc_A 63 GNSFIDLGAGIAVTTVGASHPAVAAAIAD-------QAT-HFT---HTCFMVTPYEQYVQVAELLNALTPGDHDK-RTAL 130 (453)
T ss_dssp SCEEEESSHHHHTCTTCTTCHHHHHHHHH-------HHH-HCS---CCTTTTSCCHHHHHHHHHHHHHSSCSSCE-EEEE
T ss_pred CCEEEEcCCCcccCcCCCCCHHHHHHHHH-------HHH-hcc---ccccCcCCCHHHHHHHHHHHHhCCCCCCc-EEEE
Confidence 4679998874 2347788887543 121 111 111 1111245668889999999864222 6999
Q ss_pred eCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHH-----HcC-----cEEEEEeccCC----CCccCHHHH
Q 002866 222 TVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAK-----EKG-----AKVYSAWFKWP----TLKLCSTDL 286 (872)
Q Consensus 222 TsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~Ak-----rkG-----aeV~~Vpvd~p----~g~Id~edL 286 (872)
|+|+|+|+.+++.... +..++.|++....-|........... +.+ ..+..+|+..+ .+....+.+
T Consensus 131 ~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 210 (453)
T 4ffc_A 131 FNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAA 210 (453)
T ss_dssp ESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHH
T ss_pred eCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHH
Confidence 9999999998775431 12345666654333444333221100 011 14566666421 111112222
Q ss_pred H---HHHhhhhccCCCCCceEEEEeCccCcccchhc----HH-HHHHHHHCCcEEEeecccc-CCCC--CccCCCCCCCC
Q 002866 287 R---KQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQ-WMALAQQNHWHVLLDAGSL-GPKD--MDSLGLSLFRP 355 (872)
Q Consensus 287 e---~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le-~I~~Are~G~~VLVDAAQ~-aG~~--mipLDLs~l~~ 355 (872)
+ +.|.+. .....+.+|.+..+++..|.+.| ++ +.+.|+++|+++++|-+|. .+.. +..++.....+
T Consensus 211 ~~~~~~l~~~---i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~p 287 (453)
T 4ffc_A 211 RRAISRIETQ---IGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVP 287 (453)
T ss_dssp HHHHHHHHHH---TCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCC
T ss_pred HHHHHHHHHh---cCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCc
Confidence 2 222211 01124678888888888999988 76 4567899999999999975 3221 01122223468
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 356 DFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
|++++| |.+|. ...+|+++.++++++.+.+
T Consensus 288 di~t~s--K~~~~-G~~~G~~~~~~~i~~~~~~ 317 (453)
T 4ffc_A 288 DIVTMA--KGIAG-GMPLSAVTGRAELMDAVYA 317 (453)
T ss_dssp SEEEEC--GGGGT-TSSCEEEEEEHHHHTTSCT
T ss_pred chHhhh--hhhcC-CcCeEEEEECHHHHhhhcc
Confidence 988877 98874 3458999999988777764
No 226
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=98.58 E-value=2.8e-07 Score=103.47 Aligned_cols=220 Identities=8% Similarity=-0.023 Sum_probs=132.2
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhcc-CcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSN-HALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~-~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++.-|||..+. +..++.+++++.+ .+ ..+.. +..++.+ .....+.+++++++++.+.+ .|+
T Consensus 53 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~-------~~-~~~~~~~~~~~~~--~~~~~~lae~l~~~~~~~~~--~v~ 120 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIGYGRDELAEVAAR-------QM-RELPYYNTFFKTT--HVPAIALAQKLAELAPGDLN--HVF 120 (472)
T ss_dssp TCCEEECTTHHHHTCTTCBCCHHHHHHHHH-------HH-HHCSCCCSSSSEE--CHHHHHHHHHHHHHSCTTEE--EEE
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHH-------HH-HhccccccccccC--CHHHHHHHHHHHHhCCCCCC--EEE
Confidence 34679998764 3346788887543 12 11110 0111112 24556788999999987655 599
Q ss_pred EeCCHHHHHHHHHhhCC-C------CCCCeEEEecccCchhHHHHHHHH----HH----cCcEEEEEeccC----CCCcc
Q 002866 221 FTVSRGSAFKLLAESYP-F------HTNKKLLTMFDYESQSVNWMAQSA----KE----KGAKVYSAWFKW----PTLKL 281 (872)
Q Consensus 221 FTsnATeALnLVaeslp-f------~~Gd~ILT~~DhEHnSVl~~~~~A----kr----kGaeV~~Vpvd~----p~g~I 281 (872)
||.|+|+|+..++.... + ..+++||+....-|.......... .+ ....+..+++.. +.. .
T Consensus 121 ~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~ 199 (472)
T 3hmu_A 121 FAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-M 199 (472)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-C
T ss_pred EeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-c
Confidence 99999999887766532 1 124566655432344332221110 00 011344555322 111 2
Q ss_pred C--------HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--C
Q 002866 282 C--------STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--M 345 (872)
Q Consensus 282 d--------~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--m 345 (872)
+ .++|+++|... ...++.+|.+..+++.+|.+.| ++. .+.|+++|+++++|-+|. .|.. +
T Consensus 200 ~~~~~~~~~~~~le~~i~~~----~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~ 275 (472)
T 3hmu_A 200 DPEEFGLARARELEEAILEL----GENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNW 275 (472)
T ss_dssp CHHHHHHHHHHHHHHHHHHH----CGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred CHHHHHHHHHHHHHHHHHhc----CCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCcc
Confidence 2 57788777632 1125789999889999999998 774 467899999999999976 3321 1
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCC-CceEEEEEeCCCccccc
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~ 387 (872)
..++.....||++++| |.+|+ . ..+|++++++++++.+.
T Consensus 276 ~a~~~~~v~pdi~t~s--K~l~g-g~~plG~v~~~~~i~~~~~ 315 (472)
T 3hmu_A 276 FGTQTMGIRPHIMTIA--KGLSS-GYAPIGGSIVCDEVAHVIG 315 (472)
T ss_dssp CHHHHHTCCCSEEEEC--GGGTT-TSSCCEEEEEEHHHHHHHT
T ss_pred chhHHhCCCCceeeec--hhhhc-CCcceEEEEECHHHHHhcc
Confidence 1122223568999887 98775 2 24699999998887773
No 227
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=98.47 E-value=6.2e-07 Score=100.64 Aligned_cols=221 Identities=12% Similarity=0.026 Sum_probs=130.2
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEEe
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVFT 222 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVFT 222 (872)
+.-|||..+. +..++.+++++.+ .+ ..+.....++.+ .....+..++++++++.+.+ .|+||
T Consensus 53 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~-------~l-~~~~~~~~~~~~--~~~~~~la~~l~~~~~~~~~--~v~~~ 120 (476)
T 3i5t_A 53 GRRLIDGPAGMWCAQVGYGRREIVDAMAH-------QA-MVLPYASPWYMA--TSPAARLAEKIATLTPGDLN--RIFFT 120 (476)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHH-------HH-HHCCCCCTTTCB--CHHHHHHHHHHHTTSSTTCC--EEEEE
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHH-------HH-HhccCcccCccC--CHHHHHHHHHHHhcCCCCcC--EEEEe
Confidence 4678897654 3357788887543 12 121100011122 24566788899999976655 59999
Q ss_pred CCHHHHHHHHHhhCC-C------CCCCeEEEecccCchhHHHHHHHHHH----c-----CcEEEEEeccCC-CC-ccC--
Q 002866 223 VSRGSAFKLLAESYP-F------HTNKKLLTMFDYESQSVNWMAQSAKE----K-----GAKVYSAWFKWP-TL-KLC-- 282 (872)
Q Consensus 223 snATeALnLVaeslp-f------~~Gd~ILT~~DhEHnSVl~~~~~Akr----k-----GaeV~~Vpvd~p-~g-~Id-- 282 (872)
+|+|+|+..++.... + ..++.||+....-|............ . ...+..+++... .. ..+
T Consensus 121 ~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 200 (476)
T 3i5t_A 121 TGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQE 200 (476)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHH
T ss_pred CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchH
Confidence 999999888766541 1 12346665543234433322110000 0 112334443210 00 011
Q ss_pred ------HHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeecccc-CCCC--CccC
Q 002866 283 ------STDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-GPKD--MDSL 348 (872)
Q Consensus 283 ------~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-aG~~--mipL 348 (872)
.++|+++|.... ..++.+|.+..+++.+|.+.| ++. .+.|+++|+++++|-+|. .|.. +..+
T Consensus 201 ~~~~~~~~~le~~i~~~~----~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~ 276 (476)
T 3i5t_A 201 AFLDDLVQEFEDRIESLG----PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFAS 276 (476)
T ss_dssp HHHHHHHHHHHHHHHHHC----GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHH
T ss_pred HHHHHHHHHHHHHHHhcC----CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceee
Confidence 678888886421 124788888889999998777 764 467899999999999976 3221 1112
Q ss_pred C-CCCCCCcEEEEcccccCCCCC-CceEEEEEeCCCcccccC
Q 002866 349 G-LSLFRPDFIITSFYRVFGFDP-TGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 349 D-Ls~l~~DFlv~S~HK~fG~~P-tGvG~LyVRk~~i~~L~P 388 (872)
. .....||++++| |.+|+ . ..+|++++++++++.+.+
T Consensus 277 ~~~~~v~pdi~t~s--K~l~~-G~~plg~v~~~~~i~~~~~~ 315 (476)
T 3i5t_A 277 EKVFGVVPDIITFA--KGVTS-GYVPLGGLAISEAVLARISG 315 (476)
T ss_dssp HHTTCCCCSEEEEC--GGGGT-TSSCCEEEEECHHHHHTTSG
T ss_pred ecccCCCcchhhhh--hhhcC-CCcCeEEEEECHHHHHHHhc
Confidence 2 334568999887 98875 2 346899998887776653
No 228
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.19 E-value=3.4e-06 Score=96.11 Aligned_cols=166 Identities=8% Similarity=-0.044 Sum_probs=108.4
Q ss_pred HHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhC-C-CCC-CCeEEEecccCchhHHHHHHHHHHcCcEEEEEec--cCCC
Q 002866 204 TRIMDHLNIPENEYGLVFTVSRGSAFKLLAESY-P-FHT-NKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWF--KWPT 278 (872)
Q Consensus 204 erIA~lLgA~~dEY~VVFTsnATeALnLVaesl-p-f~~-Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpv--d~p~ 278 (872)
...++.+|.+... ...+++++|.++..++-+. . -++ ++.||.+ ...|-|+..-+. -.|++.++++. +...
T Consensus 123 ld~L~~~G~~~~~-~~flVnGsTgg~lamilaa~r~~rpg~d~VIvp-Rn~HKSv~kAli---L~Gl~Pv~V~p~~d~~~ 197 (501)
T 3hl2_A 123 LDIIKLAGVHTVA-NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWP-RIDQKSCFKSMI---TAGFEPVVIENVLEGDE 197 (501)
T ss_dssp HHHHHHTTCTTCC-EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEE-CCCCHHHHHHHH---HTTCEEEEECEEEETTE
T ss_pred HHHHHHcCCCCCC-cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEe-cchHHHHHHHHH---HcCCeEEEEeeeecccc
Confidence 3445566987543 6788899997655543332 1 122 4777765 345777764333 36899988865 2234
Q ss_pred CccCHHHHHHHHhhhhccCCCCCceEEEEeCcc-CcccchhcHHH-HHHHHHCCcEEEeeccccCCCCCccCCCC----C
Q 002866 279 LKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQS-RVTGAKYSYQW-MALAQQNHWHVLLDAGSLGPKDMDSLGLS----L 352 (872)
Q Consensus 279 g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vS-NvTG~i~PLe~-I~~Are~G~~VLVDAAQ~aG~~mipLDLs----~ 352 (872)
+.+++++++++|..+ .+...+++++..+ +-.|..-||+. .+.||++|+++|||.|+.+... ...++. .
T Consensus 198 ~~id~e~le~aI~e~-----ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~-~~~~lp~sA~~ 271 (501)
T 3hl2_A 198 LRTDLKAVEAKVQEL-----GPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSS-KCMHLIQQGAR 271 (501)
T ss_dssp EEECHHHHHHHHHHH-----CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCH-HHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhc-----CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhh-hhhhhHHHHHh
Confidence 778999999999864 1124444444443 33557789985 5678999999999998765420 001111 2
Q ss_pred CC-CcEEEEcccccCCCCCCceEEEEEeCC
Q 002866 353 FR-PDFIITSFYRVFGFDPTGFGCLLIKKS 381 (872)
Q Consensus 353 l~-~DFlv~S~HK~fG~~PtGvG~LyVRk~ 381 (872)
++ +|+++.|.||++-. |.|-|+++.++.
T Consensus 272 ~GrAD~vVqS~HK~llv-pIGG~ii~~~d~ 300 (501)
T 3hl2_A 272 VGRIDAFVQSLDKNFMV-PVGGAIIAGFND 300 (501)
T ss_dssp HSCCCEEEEEHHHHHCC-CSSCEEEEESCH
T ss_pred cCCCcEEEeccccccee-ecCceEEEeCCH
Confidence 35 99999999999777 888777777653
No 229
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=97.46 E-value=2.4e-07 Score=104.85 Aligned_cols=176 Identities=11% Similarity=0.016 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEeCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEEecc
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGLVFTVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSAWFK 275 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~VVFTsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~Vpvd 275 (872)
....+..++|+++++ ..+ .|+|++++|+|+..++.... +..+++||+....-|........-....|+....+++.
T Consensus 140 ~~~~~Lae~L~~~~p-~~~--~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~ 216 (465)
T 2yky_A 140 ENEALFAEAVCDRFP-SID--LVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGV 216 (465)
Confidence 345678888999985 233 49999999999988776532 23346676543322443332220011234411222222
Q ss_pred CCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHH-HHHHHHCCcEEEeeccccCCCC--CccC
Q 002866 276 WPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQW-MALAQQNHWHVLLDAGSLGPKD--MDSL 348 (872)
Q Consensus 276 ~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~aG~~--mipL 348 (872)
++ +.++|+++|... ..++++|.+..+.+.+|.+.| ++. .+.|+++|+++++|-++. ... +..+
T Consensus 217 ~~----d~~~l~~~l~~~-----~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~ 286 (465)
T 2yky_A 217 YN----DVEGTADLLKRH-----GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQ 286 (465)
Confidence 22 567788877531 135778877776666999888 664 456799999999999988 421 0112
Q ss_pred CCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 349 GLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 349 DLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+.....+|+++ +-|++|+ ...+|+++.++++++.+.+
T Consensus 287 ~~~gv~pDi~t--~sK~lg~-G~piG~v~~~~~i~~~l~~ 323 (465)
T 2yky_A 287 EMLGISADLTT--LGKYIGG-GMSFGAFGGRRDLMERFDP 323 (465)
Confidence 22234588765 5599985 2338999999998888765
No 230
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.12 E-value=2.2e-05 Score=89.28 Aligned_cols=172 Identities=13% Similarity=0.132 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcE-EEeCCHHHHHHHHHhhCCCCCCCeEEEec-cc-CchhHHHHHH----HHHHcCcEE
Q 002866 197 TVEHDIKTRIMDHLNIPENEYGL-VFTVSRGSAFKLLAESYPFHTNKKLLTMF-DY-ESQSVNWMAQ----SAKEKGAKV 269 (872)
Q Consensus 197 ~~ieeARerIA~lLgA~~dEY~V-VFTsnATeALnLVaeslpf~~Gd~ILT~~-Dh-EHnSVl~~~~----~AkrkGaeV 269 (872)
++..-|+++..++|||+..+|.| |=--+++.|...|..++ .++||.|+... .| .|-+--..-. ....+-.++
T Consensus 100 ~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~Al-l~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~ 178 (490)
T 3ou5_A 100 EIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL-LQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFES 178 (490)
T ss_dssp HHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHH-CC-CCCEECBC---------------------------
T ss_pred HHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHH-cCCCCEEEecccCCCCcccccccCCCcccccccccccc
Confidence 45566999999999998765432 22357778877777776 48999987542 11 1111000000 011111234
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcHHHHH-HHHHCCcEEEeeccccCCC---CC
Q 002866 270 YSAWFKWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQWMA-LAQQNHWHVLLDAGSLGPK---DM 345 (872)
Q Consensus 270 ~~Vpvd~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe~I~-~Are~G~~VLVDAAQ~aG~---~m 345 (872)
...+++..++.||.++++++.... +.+|+.+..-. .-..+|++.++ +|.+.|+++++|+||.+|. ..
T Consensus 179 ~~Y~vd~~t~~IDyd~~~~~A~~~-------kPklIi~G~Sa--Y~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~ 249 (490)
T 3ou5_A 179 MPYKLNPKTGLIDYNQLALTARLF-------RPRLIIAGTSA--YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKV 249 (490)
T ss_dssp -CBCEETTTTEECHHHHHHHHHHH-------CCSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTS
T ss_pred cccccCCCCCcccHHHHHHHHhhc-------CCCeEEECCcc--CccccCHHHHHHHHhhcccEEEechhhhhhhhcccc
Confidence 444566667899999999988764 46788875533 33467787665 5789999999999986431 00
Q ss_pred ccCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 002866 346 DSLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSV 382 (872)
Q Consensus 346 ipLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~ 382 (872)
.|=.+. .+|+++++.||.|.+ |.| |+++.|++.
T Consensus 250 ~psP~~--~ADvVTtTTHKTLrG-PrG-G~Il~~~~~ 282 (490)
T 3ou5_A 250 IPSPFK--HADIVTTTTHKTLRG-ARS-GLIFYRKGV 282 (490)
T ss_dssp SCCGGG--TCSEEEEESSSTTCS-CSC-EEEEEECSE
T ss_pred cCCccc--cceEEeccccccccC-CCc-eEEEecccc
Confidence 222222 389999999999888 874 666667653
No 231
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=98.12 E-value=5.2e-05 Score=83.82 Aligned_cols=166 Identities=9% Similarity=0.083 Sum_probs=109.5
Q ss_pred HHHHHHHHHhc-CC-----CCCCCcEEEeCCHHHHHHHHHhhCC-CCCCCeEEEecccCchhHHHHHHHHHHcCcEEEEE
Q 002866 200 HDIKTRIMDHL-NI-----PENEYGLVFTVSRGSAFKLLAESYP-FHTNKKLLTMFDYESQSVNWMAQSAKEKGAKVYSA 272 (872)
Q Consensus 200 eeARerIA~lL-gA-----~~dEY~VVFTsnATeALnLVaeslp-f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGaeV~~V 272 (872)
.+.|+.|++++ +. ++++..|+.|.|+++|+.+++..+. +.+ |.|++.. ++.......++..|++++.+
T Consensus 75 ~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~----P~y~~~~~~~~~~g~~~~~v 149 (405)
T 3k7y_A 75 EDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTN----PPYINHVNMIESRGFNLKYI 149 (405)
T ss_dssp HHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEES----SCCHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeC----CCCHhHHHHHHHcCCeEEEE
Confidence 36888888876 32 2232247999999999999988753 346 8887652 22333445567789999999
Q ss_pred ec-cCCCCccCHHHHHHHHhhhhccCCCCCceEEEEeC-ccCcccchhcHHH----HHHHHHCCcEEEeeccc-cCCCCC
Q 002866 273 WF-KWPTLKLCSTDLRKQISSKKRRKKDSAAGLFVFPV-QSRVTGAKYSYQW----MALAQQNHWHVLLDAGS-LGPKDM 345 (872)
Q Consensus 273 pv-d~p~g~Id~edLe~~I~~~~rr~~~~~T~LVa~p~-vSNvTG~i~PLe~----I~~Are~G~~VLVDAAQ-~aG~~m 345 (872)
|+ +..+..++.++|++.+... ++++++.+.. .+|.||..++.+. +..|++++++++.|-+- -...+
T Consensus 150 ~~~~~~~~~~d~~~l~~~l~~~------~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~- 222 (405)
T 3k7y_A 150 NFFDYNLIDINYDLFLNDLRNI------PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHT- 222 (405)
T ss_dssp CCEETTTTEECHHHHHHHHHHS------CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSS-
T ss_pred eccccccCCcCHHHHHHHHHhC------CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCC-
Confidence 88 3334578999999988642 2356766644 4799999999863 35678999999999772 12110
Q ss_pred ccCC-----C----CCCCCcEEEEcccccCCCCCCceEEEEE
Q 002866 346 DSLG-----L----SLFRPDFIITSFYRVFGFDPTGFGCLLI 378 (872)
Q Consensus 346 ipLD-----L----s~l~~DFlv~S~HK~fG~~PtGvG~LyV 378 (872)
..+ + ....-=+++.|+=|.||-+=-.+|.+++
T Consensus 223 -~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 223 -NLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp -STTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred -CcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEE
Confidence 010 1 1112236778999998831234788764
No 232
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=97.80 E-value=0.00022 Score=79.63 Aligned_cols=224 Identities=13% Similarity=0.006 Sum_probs=129.7
Q ss_pred HHHhhcccCCCC--ceecccCCCCCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhc-CCC-
Q 002866 138 QLRANEYLHLSP--KVCLDYCGFGLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHL-NIP- 213 (872)
Q Consensus 138 ~lR~~EFP~L~~--~IYLDyAAtgp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lL-gA~- 213 (872)
..+++.-|..+- -+|.|..|-+|+.+.|.+|.. .+...-.++ .|.... -+.+.|+.+++++ |-.
T Consensus 38 ~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~--------~~~~~~~~~-~Y~p~~---G~p~lr~aia~~~~g~~~ 105 (420)
T 4h51_A 38 RAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQ--------LLLDMNLDY-EYLPIS---GYQPFIDEAVKIIYGNTV 105 (420)
T ss_dssp HHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHH--------HHHHTTCCC-CCCCTT---CCHHHHHHHHHHHHC---
T ss_pred HHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHH--------HHhcCCCCC-CCCCcC---ChHHHHHHHHHHhcCCCc
Confidence 345443443322 479999998898888877632 122221111 132111 1235777778765 432
Q ss_pred -CCCCcEEEeCCHHHHHHHHHhhCC---CCCCCeEEEecccCchhHHHHHHHHHHcCcE-EEEEec-cCCCCccCHHHHH
Q 002866 214 -ENEYGLVFTVSRGSAFKLLAESYP---FHTNKKLLTMFDYESQSVNWMAQSAKEKGAK-VYSAWF-KWPTLKLCSTDLR 287 (872)
Q Consensus 214 -~dEY~VVFTsnATeALnLVaeslp---f~~Gd~ILT~~DhEHnSVl~~~~~AkrkGae-V~~Vpv-d~p~g~Id~edLe 287 (872)
.+....+-|.++|.|+.+.+..+. ..+||+|++..-. ..+... ..+..|.+ |...+. +..+..++.+.+.
T Consensus 106 ~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~-w~~y~~---i~~~aG~~~V~~~~~~~~~~~~~d~~~~~ 181 (420)
T 4h51_A 106 ELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPT-WPNHYG---VVKAAGWKNICTYAYYDPKTVSLNFEGMK 181 (420)
T ss_dssp CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESC-CTHHHH---HHHHTTCCCEEEEECEEGGGTEECHHHHH
T ss_pred cccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCC-chhHHH---HHHHcCCeEEEeeccccccccCCCHHHHH
Confidence 222123448999998877655432 2589998765321 112222 23446765 443332 2223457888888
Q ss_pred HHHhhhhccCCCCCceEEEEeCccCcccchhcHH-H---HHHHHHCCcEEEeecc-ccCCCCCccCC-------CCCCCC
Q 002866 288 KQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSYQ-W---MALAQQNHWHVLLDAG-SLGPKDMDSLG-------LSLFRP 355 (872)
Q Consensus 288 ~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PLe-~---I~~Are~G~~VLVDAA-Q~aG~~mipLD-------Ls~l~~ 355 (872)
+.+.. ..++++++.++..+|.||..++.+ | +..|+++++.++.|-+ |-...+-...+ ......
T Consensus 182 ~~l~~-----~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
T 4h51_A 182 KDILA-----APDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIE 256 (420)
T ss_dssp HHHHH-----SCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC
T ss_pred HHHhc-----cCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCce
Confidence 87764 234678888888899999999986 3 3566899999999988 43322100000 011122
Q ss_pred cEEEEcccccCCCCCCc--eEEEEEeCCCcc
Q 002866 356 DFIITSFYRVFGFDPTG--FGCLLIKKSVMG 384 (872)
Q Consensus 356 DFlv~S~HK~fG~~PtG--vG~LyVRk~~i~ 384 (872)
=+++.|+=|.||. .| +|+|.+.....+
T Consensus 257 ~i~~~s~SK~~~~--~G~RvG~~~~~~~~~~ 285 (420)
T 4h51_A 257 VLLAQSFSKNMGL--YSERAGTLSLLLKDKT 285 (420)
T ss_dssp CEEEEECTTTSCC--GGGCEEEEEEECSCHH
T ss_pred EEEEecccccccc--ccCceEEEEecccCHH
Confidence 3677799998873 35 999988776544
No 233
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=97.49 E-value=0.00014 Score=82.43 Aligned_cols=210 Identities=14% Similarity=0.079 Sum_probs=121.5
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
++.-|||+.+. +--.+.+++++.+ .+.....++.+.. ...+.-+.|++.+..- ..|.|
T Consensus 85 dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~-----------q~~~~~~~~~~~~--~~~~lae~l~~~~p~~---~~v~f 148 (454)
T 4ao9_A 85 DGHRYADFIAEYTAGVYGHSAPEIRDAVIE-----------AMQGGINLTGHNL--LEGRLARLICERFPQI---EQLRF 148 (454)
T ss_dssp TCCEEEESSGGGGTTTTCSCCHHHHHHHHH-----------HHHTCSCCCSEES--SHHHHHHHHHHHSTTC---SEEEE
T ss_pred CCCEEEEccccHHhhcccCCCHHHHHHHHH-----------HHhcCCCccCCcH--HHHHHHHHHHHhCCCC---CEEEE
Confidence 45789998653 2245777777533 1111123343332 2234556788877531 26999
Q ss_pred eCCHHHHHHHHHhhC-CCCCCCeEEEecccCchhHHHHHHH--HHHcCcEEEEEeccCCCCccCHHHHHHHHhhhhccCC
Q 002866 222 TVSRGSAFKLLAESY-PFHTNKKLLTMFDYESQSVNWMAQS--AKEKGAKVYSAWFKWPTLKLCSTDLRKQISSKKRRKK 298 (872)
Q Consensus 222 TsnATeALnLVaesl-pf~~Gd~ILT~~DhEHnSVl~~~~~--AkrkGaeV~~Vpvd~p~g~Id~edLe~~I~~~~rr~~ 298 (872)
++++|||....+... .+...++|+.....-|......... .......+..+|.+ +.+.+++.|.+.
T Consensus 149 ~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n------d~~~l~~~l~~~----- 217 (454)
T 4ao9_A 149 TNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN------DAQTARAQIERH----- 217 (454)
T ss_dssp ESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT------CHHHHHHHHHHT-----
T ss_pred eCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCc------hHHHHHHHHhhc-----
Confidence 999999877654321 1222345665433223322111000 00011233444432 578888888753
Q ss_pred CCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeeccccCCCCCccCC---CCCCCCcEEEEcccccCCCCC
Q 002866 299 DSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSLGPKDMDSLG---LSLFRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 299 ~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~aG~~mipLD---Ls~l~~DFlv~S~HK~fG~~P 370 (872)
.+++..|.+--+....|.+.| ++.+ ++|+++|+++++|=+|. |. .-..- .-.+.||+++++ |.+|+ -
T Consensus 218 ~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR-~G~~~a~e~~gv~PDi~t~g--K~lgg-G 292 (454)
T 4ao9_A 218 GPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT-SR-LAPHGLANKLGIRSDLTTLG--KYIGG-G 292 (454)
T ss_dssp GGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG-GG-GSTTCHHHHHTCCCSEEEEE--GGGGT-T
T ss_pred CCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc-CC-CccccchhccCCCCcEEEec--cccCC-C
Confidence 234677777778888999998 6544 56799999999999986 32 01111 112468998765 65443 1
Q ss_pred CceEEEEEeCCCcccccCC
Q 002866 371 TGFGCLLIKKSVMGSLQNQ 389 (872)
Q Consensus 371 tGvG~LyVRk~~i~~L~P~ 389 (872)
.-+|++..++++++.+.|.
T Consensus 293 ~Piga~~~~~ei~~~~~~~ 311 (454)
T 4ao9_A 293 MSFGAFGGRADVMALFDPR 311 (454)
T ss_dssp SSCEEEEECHHHHGGGCTT
T ss_pred CcceeeeeHHHHHHHHhhc
Confidence 2389999999998888653
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=96.23 E-value=0.073 Score=60.13 Aligned_cols=226 Identities=9% Similarity=0.027 Sum_probs=116.9
Q ss_pred CCceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhccCc-CcCCCchHHHHHHHHHHHHHhcCCCCCCCcEE
Q 002866 148 SPKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSNHA-LYGGAEKGTVEHDIKTRIMDHLNIPENEYGLV 220 (872)
Q Consensus 148 ~~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~~~-~ygNpsS~~~ieeARerIA~lLgA~~dEY~VV 220 (872)
++.-|||..+. +--.+.+++++.+ -...+. +. .++.|+ +...+.-+++++++..+.- ..|.
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~--------q~~~~~-~~~~~~~~~--~~~~~lae~L~~~~p~~~~-~~v~ 129 (456)
T 4atq_A 62 DGNSFIDLGSGIAVTSVGASDPAVVAAVQE--------AAAHFT-HTCFMVTPY--EGYVAVTEQLNRLTPGDHA-KRTV 129 (456)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHH--------HHHHCS-CCTTTTSCC--HHHHHHHHHHHHHSSCSSC-EEEE
T ss_pred CCCEEEEccccHHHHhcCCCCHHHHHHHHH--------HHhhcc-CcccCccCc--HHHHHHHHHHHHhCCCCCC-cEEE
Confidence 45789997543 3345677777533 112221 22 223343 2233455677888754322 2588
Q ss_pred EeCCHHHHHHHHHhh-CCCCCCCeEEEecccCchhHHHHHHHH-----HHc-----CcEEEEEeccCCC----Ccc-CHH
Q 002866 221 FTVSRGSAFKLLAES-YPFHTNKKLLTMFDYESQSVNWMAQSA-----KEK-----GAKVYSAWFKWPT----LKL-CST 284 (872)
Q Consensus 221 FTsnATeALnLVaes-lpf~~Gd~ILT~~DhEHnSVl~~~~~A-----krk-----GaeV~~Vpvd~p~----g~I-d~e 284 (872)
|+.++|||+...+.- ..+....+|++....-|....+..... .+. ...+..+|...+. ... +.+
T Consensus 130 f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~ 209 (456)
T 4atq_A 130 LFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAE 209 (456)
T ss_dssp EESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHH
T ss_pred EeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHH
Confidence 999999987654431 111223456654332244333222110 001 1235556653221 111 122
Q ss_pred HHHHHHhhhhccCCCCCceEEEEeCccCcccchhc----HHHH-HHHHHCCcEEEeeccccC-CCC--CccCCCCCCCCc
Q 002866 285 DLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYS----YQWM-ALAQQNHWHVLLDAGSLG-PKD--MDSLGLSLFRPD 356 (872)
Q Consensus 285 dLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~P----Le~I-~~Are~G~~VLVDAAQ~a-G~~--mipLDLs~l~~D 356 (872)
.++..+....+.....+..-|.+--+....|.+.| ++.+ +.|+++|+++++|=+|.+ |.. +.-...-.+.||
T Consensus 210 ~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PD 289 (456)
T 4atq_A 210 AAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPD 289 (456)
T ss_dssp HHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCS
T ss_pred HHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCc
Confidence 33332221111111224556666666677898877 3434 467999999999999875 321 111122234699
Q ss_pred EEEEcccccCCCCCCceEEEEEeCCCcccccC
Q 002866 357 FIITSFYRVFGFDPTGFGCLLIKKSVMGSLQN 388 (872)
Q Consensus 357 Flv~S~HK~fG~~PtGvG~LyVRk~~i~~L~P 388 (872)
+++++ |.+|+ =.=+|++.++++.++.+.+
T Consensus 290 ivt~g--K~lgg-g~P~~av~~~~~i~~~~~~ 318 (456)
T 4atq_A 290 IITMA--KGIAG-GLPLSAITGRADLLDAVHP 318 (456)
T ss_dssp EEEEC--GGGGT-TSSCEEEEEEHHHHTTSCT
T ss_pred hhhhh--hcccC-cCCceeeEecHHHHhcccc
Confidence 99987 54432 1127899999988877654
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=94.52 E-value=0.31 Score=55.26 Aligned_cols=221 Identities=14% Similarity=0.074 Sum_probs=114.8
Q ss_pred CceecccCCC------CCCcHHHHHHhhhcccccHHHHHHhhcc-CcCcCCCchHHHHHHHHHHHHHhcCCCCCCCcEEE
Q 002866 149 PKVCLDYCGF------GLFSYIQTLHYWESSTFSLSEITANLSN-HALYGGAEKGTVEHDIKTRIMDHLNIPENEYGLVF 221 (872)
Q Consensus 149 ~~IYLDyAAt------gp~p~~VieA~~e~~~F~ls~i~~nL~~-~~~ygNpsS~~~ieeARerIA~lLgA~~dEY~VVF 221 (872)
+.-|||..+. +--.+.+++++.+ -...+.. +..++.++ +...+.-++|++++..+-+ .|.|
T Consensus 66 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~--------q~~~l~~~~~~~~~~~--~~~~~lAe~L~~~~p~~~~--~v~f 133 (473)
T 4e3q_A 66 GRRYLDANSGLWNMVAGFDHKGLIDAAKA--------QYERFPGYHAFFGRMS--DQTVMLSEKLVEVSPFDSG--RVFY 133 (473)
T ss_dssp CCEEEETTTTTTTCTTCSCCHHHHHHHHH--------HHHHCCCCCCCTTEEE--HHHHHHHHHHHHHSSCSSC--EEEE
T ss_pred CCEEEEcccCHHHhhccCCCHHHHHHHHH--------HHHhcccccccccccC--HHHHHHHHHHHhhCCCCcc--EEEE
Confidence 4689997554 2234667776532 1122211 12334343 2223444677888765543 5999
Q ss_pred eCCHHHHHHHHHhh---C---CCCCCC-eEEEecccCchhHHHHHHHH-----HHcC---cEEEEEeccC-----CCCcc
Q 002866 222 TVSRGSAFKLLAES---Y---PFHTNK-KLLTMFDYESQSVNWMAQSA-----KEKG---AKVYSAWFKW-----PTLKL 281 (872)
Q Consensus 222 TsnATeALnLVaes---l---pf~~Gd-~ILT~~DhEHnSVl~~~~~A-----krkG---aeV~~Vpvd~-----p~g~I 281 (872)
+.++|||+...+.- | .-+++. +||+....-|.......... +..+ ..+..++... ..+..
T Consensus 134 ~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 213 (473)
T 4e3q_A 134 TNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGET 213 (473)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCC
T ss_pred eCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccch
Confidence 99999986654432 2 112333 46655432244333222110 0001 1123333210 00111
Q ss_pred -------CHHHHHHHHhhhhccCCCCCceEEEEeCccCcccchhcH----HHH-HHHHHCCcEEEeeccccC-CCC--Cc
Q 002866 282 -------CSTDLRKQISSKKRRKKDSAAGLFVFPVQSRVTGAKYSY----QWM-ALAQQNHWHVLLDAGSLG-PKD--MD 346 (872)
Q Consensus 282 -------d~edLe~~I~~~~rr~~~~~T~LVa~p~vSNvTG~i~PL----e~I-~~Are~G~~VLVDAAQ~a-G~~--mi 346 (872)
..+++++.|... .......|.+.-+....|.+.|- +.+ +.|+++|+++++|=+|.+ |.. +.
T Consensus 214 ~~~~~~~~~~~l~~~i~~~----~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~f 289 (473)
T 4e3q_A 214 EEQFVARLARELEETIQRE----GADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTW 289 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHH----CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSC
T ss_pred hhHHHHHHHHHHHHHHHhh----CCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchh
Confidence 123445555432 12246777777787888988873 334 467999999999999864 220 11
Q ss_pred cCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCccccc
Q 002866 347 SLGLSLFRPDFIITSFYRVFGFDPTGFGCLLIKKSVMGSLQ 387 (872)
Q Consensus 347 pLDLs~l~~DFlv~S~HK~fG~~PtGvG~LyVRk~~i~~L~ 387 (872)
-...-...||+++++ |-+|+.=.=+|++.+++++.+.+.
T Consensus 290 a~e~~gv~PDi~t~~--K~l~gG~~Pl~av~~~~~i~~~~~ 328 (473)
T 4e3q_A 290 GCVTYDFTPDAIISS--KNLTAGFFPMGAVILGPELSKRLE 328 (473)
T ss_dssp HHHHTTCCCSEEEEC--GGGGTTSSCCEEEEECHHHHHHHH
T ss_pred HHHhcCCCCChHHhc--ccccCCCCCcccccccHHHHHHhc
Confidence 111123569999875 654320011799999998876554
No 236
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=93.48 E-value=0.28 Score=52.34 Aligned_cols=117 Identities=8% Similarity=0.035 Sum_probs=72.1
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
|..+..|.+.+.++|.+.|.++.. ++++++. .+++.+.|+|.=.+..-++...|.+.+.++||.++
T Consensus 268 l~~~~~~~~~~~~~l~~~L~~~~~-----------~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~ 333 (390)
T 3b8x_A 268 LPRFISVRRKNAEYFLDKFKDHPY-----------LDVQQET---GESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECR 333 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSS-----------EEECCCC---SBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCB
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCC-----------cccCCCC---CCcccEEEEEEecCcCcccHHHHHHHHHHCCCCee
Confidence 457888999999999999987643 6787763 45666667653211112456666666677899999
Q ss_pred e---ccccc--ccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 782 I---GFLSH--IRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 782 ~---G~l~~--i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
. |.+|. +.+... +...+. ..+ .. ...--++||.|++..+|.|||+++++.|
T Consensus 334 ~~~~~~~~~~~~~~~~~-----~~~~~~----~~~----~~----~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 334 PIVTGNFLKNTDVLKYF-----DYTVHN----NVD----NA----EYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp CSTTSSGGGCHHHHTTC-----EEEESS----CCH----HH----HHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred eecCCchhhcchhhhcC-----CCCCcC----CCh----HH----HHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 8 44442 222110 000000 000 00 0011248999999999999999998764
No 237
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=93.31 E-value=0.4 Score=52.32 Aligned_cols=120 Identities=7% Similarity=-0.024 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCcccc-c----eEEEEeccCCCCccChHHHHHHHHHcCCe
Q 002866 705 TTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERG-A----AVAFNVRDKERGLINPEVVQKLAEKEGIS 779 (872)
Q Consensus 705 I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG-~----~VAFNv~d~~G~~v~p~~VqkLAdr~~Is 779 (872)
.-.|.+.+.++|...|.++.. +.+|. .....+. + +|.|..- .| +++..|.+.+.++||.
T Consensus 309 ~~~~~~~~~~~l~~~L~~~~g-----------~~~~~-~~~~~~~~~~~~~~~~~~~~--~~--~~~~~l~~~L~~~GI~ 372 (437)
T 3bb8_A 309 FVEKRKANFKYLKDALQSCAD-----------FIELP-EATENSDPSWFGFPITLKED--SG--VSRIDLVKFLDEAKVG 372 (437)
T ss_dssp HHHHHHHHHHHHHHHGGGGTT-----------TEECC-CCCTTEECCCSSEEEEECGG--GS--SCHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHHhhccCC-----------ccccC-CCCCCCceeeEEEEEEECCc--Cc--CcHHHHHHHHHHCCCc
Confidence 334448889999999988742 24453 2211221 2 2333321 12 5667777777778999
Q ss_pred Eeeccc--cc--ccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 780 LGIGFL--SH--IRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 780 Lr~G~l--~~--i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
+|.++. |+ +.+... +...+. ..+ .. ...--++||.+++..+|.|||+++++.|.+++..
T Consensus 373 v~~~~~~~~~~~p~~~~~-----~~~~~~----~~~----~~----~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~~ 435 (437)
T 3bb8_A 373 TRLLFAGNLTRQPYFHDV-----KYRVVG----ELT----NT----DRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFGL 435 (437)
T ss_dssp CBCCTTSSGGGSGGGSSC-----CCEECS----CCH----HH----HHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTTT
T ss_pred eeccCCcccccCchhhcc-----CccccC----CCc----HH----HHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHcc
Confidence 999854 32 222110 000000 000 00 0011248999999999999999999999998776
Q ss_pred cc
Q 002866 856 AF 857 (872)
Q Consensus 856 ~f 857 (872)
.|
T Consensus 436 ~~ 437 (437)
T 3bb8_A 436 NF 437 (437)
T ss_dssp TC
T ss_pred cC
Confidence 54
No 238
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=93.08 E-value=0.041 Score=57.14 Aligned_cols=88 Identities=13% Similarity=0.011 Sum_probs=55.8
Q ss_pred EEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeec---------ccccccccCCcccCCCCCcCCCCC
Q 002866 737 VHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIG---------FLSHIRILDSPRQQGGSSSLDDTT 807 (872)
Q Consensus 737 V~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G---------~l~~i~~~d~~~~~~g~~~~~~~~ 807 (872)
+++|++.. ..+|++++|.+. ++..+.+++++.||.++.+ ..|.... +... .
T Consensus 234 ~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~--~~~~----~------ 293 (331)
T 1pff_A 234 HEIAKKQM-KMFGSMIAFDVD-------GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMT--HAGV----P------ 293 (331)
T ss_dssp HHHHHHHC-SSCCSEEEEECS-------SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHT--STTS----C------
T ss_pred HHHHHhhC-CCCceEEEEEEC-------CHHHHHHHHHhCCCceeccCCCCcceeeecchhhc--cccc----C------
Confidence 45555433 247999999985 4678999999999977654 2332110 0000 0
Q ss_pred CCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 808 LCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 808 ~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
.......|.. -++||+|+|..+|.+||++|.+.+.+.
T Consensus 294 ~~~~~~~g~~--------~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 294 KEEREAAGLT--------DNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HHHHHHTTCC--------TTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCC--------CCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 0000001111 259999999999999999999998764
No 239
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=92.90 E-value=0.39 Score=52.56 Aligned_cols=105 Identities=19% Similarity=0.126 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCceEEEEe-CCCCC-------------ccccceEEEEeccCCCCccChHHHHHHHHH
Q 002866 710 RFLINWLVTSLLQLRFSDSDGESRAHLVHIY-GPKIK-------------YERGAAVAFNVRDKERGLINPEVVQKLAEK 775 (872)
Q Consensus 710 r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IY-Gp~~~-------------~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr 775 (872)
..+..+|...|.+++. |+++ .|... ..+|++|+|++.+ . +..+.++.++
T Consensus 295 ~~~a~~l~~~L~~~p~-----------v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~-----~-~~~~~~~~~~ 357 (421)
T 2ctz_A 295 VENTLHLAHWLLEQPQ-----------VAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG-----G-YEAAKRFISR 357 (421)
T ss_dssp HHHHHHHHHHHHTCTT-----------EEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT-----H-HHHHHHHHHT
T ss_pred HHhHHHHHHHHHhCCC-----------eeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCC-----C-HHHHHHHHHh
Confidence 3678888888887543 5554 34421 3579999999975 2 6778889887
Q ss_pred cCC---eEeeccccc----ccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHH
Q 002866 776 EGI---SLGIGFLSH----IRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAF 848 (872)
Q Consensus 776 ~~I---sLr~G~l~~----i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~F 848 (872)
.++ .++.|..+. +....+... . ... -...|.. -+.||+|+|+ ||++.|++-
T Consensus 358 l~~~~~~~~~G~~~sl~~~~~~~~h~~~-------~--~~~-~~~~g~~--------~~~vRlS~g~----e~~~~li~~ 415 (421)
T 2ctz_A 358 LKLISHLANVGDTRTLAIHPASTTHSQL-------S--PEE-QAQAGVS--------PEMVRLSVGL----EHVEDLKAE 415 (421)
T ss_dssp CSSSEECSCCCCSSCEEECGGGTTTTTS-------C--HHH-HHHHTCC--------TTEEEEECCS----SCHHHHHHH
T ss_pred CCcceecccCCCCCceeeCCcccccccC-------C--HHH-HHhcCCC--------CCeEEEEeCC----CCHHHHHHH
Confidence 665 445563322 111111000 0 000 0001111 3699999997 688888888
Q ss_pred HHHhc
Q 002866 849 VAKFL 853 (872)
Q Consensus 849 va~Fl 853 (872)
+.+-|
T Consensus 416 l~~al 420 (421)
T 2ctz_A 416 LKEAL 420 (421)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77754
No 240
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=91.93 E-value=0.67 Score=48.45 Aligned_cols=125 Identities=10% Similarity=-0.047 Sum_probs=72.5
Q ss_pred hhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCcccc-ceEEEEeccCCCCcc-ChHHHHHHHHHc
Q 002866 699 MLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERG-AAVAFNVRDKERGLI-NPEVVQKLAEKE 776 (872)
Q Consensus 699 ~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG-~~VAFNv~d~~G~~v-~p~~VqkLAdr~ 776 (872)
.-++..+..|.+.+.++|...|.++.. +++++|......+ .++.+.+.+ . -+ +...+.+.+.++
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~~L~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~l~~~L~~~ 308 (375)
T 2fnu_A 243 LKKAPFLMQKREEAALTYDRIFKDNPY-----------FTPLHPLLKDKSSNHLYPILMHQ-K--FFTCKKLILESLHKR 308 (375)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHTTCSS-----------EEESGGGCSSCCCCSCEEEEECG-G--GGGGHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC-----------ccccCCCCCCCcceEEEEEEeCc-c--ccchHHHHHHHHHHC
Confidence 345778889999999999999998653 6888763211122 233344322 1 12 455555555678
Q ss_pred CCeEeeccccccccc-CCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 777 GISLGIGFLSHIRIL-DSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 777 ~IsLr~G~l~~i~~~-d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
||.++.++. +... ..+.. + . . ... .+.. ....-++||+|++..+|.||++++++.+.+++.
T Consensus 309 gi~v~~~~~--p~~~~~~~~~--~-~--~-~~~-~~~~--------~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~ 370 (375)
T 2fnu_A 309 GILAQVHYK--PIYQYQLYQQ--L-F--N-TAP-LKSA--------EDFYHAEISLPCHANLNLESVQNIAHSVLKTFE 370 (375)
T ss_dssp TEECBCCCC--CGGGSHHHHH--H-H--C-CCC-CHHH--------HHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCcccccc--ccccchhhhc--C-C--C-ccC-ChHH--------HHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 999985431 2100 00000 0 0 0 000 0000 001125899999999999999999999998753
No 241
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=91.66 E-value=0.71 Score=48.80 Aligned_cols=122 Identities=9% Similarity=0.011 Sum_probs=74.3
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCC--CccccceEEEEeccCCCCccChHHHHHHHHHcCC
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKI--KYERGAAVAFNVRDKERGLINPEVVQKLAEKEGI 778 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~--~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~I 778 (872)
++..+..|.+.+.++|...|.++. +++|++.. ....+.++.|.+-+.. .-++...|.+.+.++||
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~------------~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~l~~~l~~~gi 324 (393)
T 1mdo_A 258 KLDALNARRAAIAAQYHQAMADLP------------FQPLSLPSWEHIHAWHLFIIRVDEAR-CGITRDALMASLKTKGI 324 (393)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTSS------------CEECCCCSSCEECCCSCEEEECCHHH-HSSCHHHHHHHHHHTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC------------cccccCCCCCCCceeEEEEEEecccc-cccCHHHHHHHHHhCCC
Confidence 356777888889999999998753 36665431 1123346777764200 01456667666677899
Q ss_pred eEeecccccc---cccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 779 SLGIGFLSHI---RILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 779 sLr~G~l~~i---~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.++.|..|.. .+...+ ..+. .+ ....+.-.+||++++..+|.||++++++.|.+++.
T Consensus 325 ~v~~~~~~~~~~~~~~~~~--~~~~---------------~~--~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~ 384 (393)
T 1mdo_A 325 GTGLHFRAAHTQKYYRERF--PTLT---------------LP--DTEWNSERICSLPLFPDMTESDFDRVITALHQIAG 384 (393)
T ss_dssp CCBCCCCCGGGSHHHHHHS--TTCC---------------CH--HHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CcccccCccccChhhhccC--CccC---------------Ch--hHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 9999876521 110000 0000 00 00000123899999999999999999999998654
No 242
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=91.63 E-value=0.62 Score=50.66 Aligned_cols=107 Identities=12% Similarity=0.053 Sum_probs=75.1
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQ 770 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~Vq 770 (872)
..|++++. +..+..|++.+.++|.+.|.++. +.++++. .+|+++.|.+-+ .... .+++
T Consensus 306 ~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~---~~~~~~~~~~~~----~~~~~~l~~ 364 (427)
T 2w8t_A 306 TSIRKLMT--AHEKRERLWSNARALHGGLKAMG------------FRLGTET---CDSAIVAVMLED----QEQAAMMWQ 364 (427)
T ss_dssp HHHHHHTS--CHHHHHHHHHHHHHHHHHHHHHT------------CEESCSS---CCSSEEEEEESS----HHHHHHHHH
T ss_pred HHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcC------------CcccCCC---CCCCEEEEEECC----HHHHHHHHH
Confidence 34555543 57788899999999999998873 3566542 478999998853 1223 3445
Q ss_pred HHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHH
Q 002866 771 KLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVA 850 (872)
Q Consensus 771 kLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva 850 (872)
+|.+ +||.++.|..... . . +-+.+|+|++...|.||++++++.+.
T Consensus 365 ~L~~-~Gi~v~~~~~~~~-----~-------------------~----------~~~~lRi~~~~~~t~e~i~~~~~~l~ 409 (427)
T 2w8t_A 365 ALLD-GGLYVNMARPPAT-----P-------------------A----------GTFLLRCSICAEHTPAQIQTVLGMFQ 409 (427)
T ss_dssp HHHH-TTEECEEECTTTS-----C-------------------T----------TCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHHH-CCeEEeeeCCCCC-----C-------------------C----------CCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 5554 5999887743210 0 0 13589999999999999999999999
Q ss_pred HhcC
Q 002866 851 KFLN 854 (872)
Q Consensus 851 ~Fld 854 (872)
+++.
T Consensus 410 ~~l~ 413 (427)
T 2w8t_A 410 AAGR 413 (427)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 243
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=90.60 E-value=0.2 Score=54.40 Aligned_cols=84 Identities=13% Similarity=0.173 Sum_probs=50.3
Q ss_pred cceEEEEeccCCCCccChHHHHHHHHHcCC---eEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccc
Q 002866 749 GAAVAFNVRDKERGLINPEVVQKLAEKEGI---SLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIR 825 (872)
Q Consensus 749 G~~VAFNv~d~~G~~v~p~~VqkLAdr~~I---sLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~ 825 (872)
|++|+|++.+ .+..++++.+..++ .++.|..|.... .+.. ..+.. . .... -...|..
T Consensus 305 ~~i~~~~l~~------~~~~~~~~l~~l~~~~~~~s~G~~~s~~~--~p~~-~~h~~-~-~~~~-~~~~g~~-------- 364 (393)
T 1n8p_A 305 GGMISFRIKG------GAEAASKFASSTRLFTLAESLGGIESLLE--VPAV-MTHGG-I-PKEA-REASGVF-------- 364 (393)
T ss_dssp CSEEEEEESS------CHHHHHHHHHHCSSSEECSCCCCSSCEEE--CTTT-TTSCS-S-CTTT-TTTTSCC--------
T ss_pred ccEEEEEeCC------cHHHHHHHHhhCCcceECCCCCCCcceee--cccc-ccccc-c-CHHH-HHhcCCC--------
Confidence 8999999964 25678888886654 556675554211 0000 00000 0 0000 0011211
Q ss_pred eeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 826 VEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 826 ~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
-+.||+|+|+.++.++|.+|.+.+.+.
T Consensus 365 ~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 365 DDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp TTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 369999999999999999999999874
No 244
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=90.11 E-value=0.69 Score=48.55 Aligned_cols=127 Identities=13% Similarity=0.025 Sum_probs=74.5
Q ss_pred hhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHH
Q 002866 694 LDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLA 773 (872)
Q Consensus 694 Ldh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLA 773 (872)
+.....-++..+..|.+.+.++|...|..+.. . +++..+.. ......+.|.+.. .+...+.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--------~--~~~~~~~~-~~~~~~~~~~~~~-----~~~~~l~~~L 302 (374)
T 3uwc_A 239 IANRLMNQLETITEKRRGIAHLYDQSFVDLSE--------F--IDVPVRRE-GVYHVFHIYVLRV-----KYRDQLFQYL 302 (374)
T ss_dssp HHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTT--------T--EECCCCCT-TEECCCSSEEEEE-----TTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--------e--EEeccCCC-CCceeeEEEEEEc-----CCHHHHHHHH
Confidence 34444456778889999999999999988652 0 12221110 1122224455543 2456666666
Q ss_pred HHcCCeEeecc----cccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 774 EKEGISLGIGF----LSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 774 dr~~IsLr~G~----l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
.++||.++.|+ .+.+.+... +.. .. ..+ . .....-.+||++++..+|.|||+++++.|
T Consensus 303 ~~~gi~v~~~~~~~~~~~~~~~~~-----~~~----~~-~~~----~----~~~~~~~~lrl~~~~~~t~edi~~~~~~l 364 (374)
T 3uwc_A 303 KDNGIEVKIHYPIAMHLQPAAKSL-----GYQ----QG-DFP----M----AEKHGEAVITLPAHPYLTEEEINYIIKKV 364 (374)
T ss_dssp HHTTBCCBCSCSSCGGGSGGGGGG-----CCC----TT-SCH----H----HHHHHHHEEEECCCTTSCHHHHHHHHHHH
T ss_pred HHCCCccccCCCCccccChhhhhc-----CCc----cC-CCc----c----HHHHHhCEEEccCCCCCCHHHHHHHHHHH
Confidence 77799999986 222221100 000 00 000 0 00011269999999999999999999999
Q ss_pred HHhcC
Q 002866 850 AKFLN 854 (872)
Q Consensus 850 a~Fld 854 (872)
.+++.
T Consensus 365 ~~~l~ 369 (374)
T 3uwc_A 365 REFYL 369 (374)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99764
No 245
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=89.81 E-value=0.91 Score=48.20 Aligned_cols=106 Identities=12% Similarity=0.109 Sum_probs=74.0
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQK 771 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vqk 771 (872)
..|++++. +..+..|.+.+.++|...|.++.. +++ | .+|..+.|++-+ .++...+.+
T Consensus 290 ~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~------------~~~-~----~~~~~~~~~~~~----~~~~~~l~~ 346 (401)
T 1fc4_A 290 KVLEMVEA--GSELRDRLWANARQFREQMSAAGF------------TLA-G----ADHAIIPVMLGD----AVVAQKFAR 346 (401)
T ss_dssp HHHHHHHT--CHHHHHHHHHHHHHHHHHHHHTTC------------CBC-C----SSSSEEEEEEEC----HHHHHHHHH
T ss_pred HHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCC------------ccc-C----CCCCEEEEEcCC----hHHHHHHHH
Confidence 34555544 467888999999999999988732 334 2 478899998843 133444444
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
.+.++||.++.|..+.. . . +-..||+|+++..|.+|+.++++.+.+
T Consensus 347 ~l~~~gi~v~~~~~~~~-----~-------------------~----------~~~~iRi~~~~~~~~~~i~~~~~~l~~ 392 (401)
T 1fc4_A 347 ELQKEGIYVTGFFYPVV-----P-------------------K----------GQARIRTQMSAAHTPEQITRAVEAFTR 392 (401)
T ss_dssp HHHHTTEECCEECTTSS-----C-------------------T----------TCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHCCcEEeeecCCCC-----C-------------------C----------CCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 44556999988754310 0 0 024899999999999999999999998
Q ss_pred hcC
Q 002866 852 FLN 854 (872)
Q Consensus 852 Fld 854 (872)
++.
T Consensus 393 ~~~ 395 (401)
T 1fc4_A 393 IGK 395 (401)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 246
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=89.76 E-value=2 Score=44.41 Aligned_cols=88 Identities=19% Similarity=0.133 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeec
Q 002866 704 KTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIG 783 (872)
Q Consensus 704 ~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G 783 (872)
.+..|.+.+.++|...|.++.. ++++.| ..+..+.+.+- ..++++| .++||.++.|
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~~g-----------~~~~~~----~~~~~~~~~~~--------~~~~~~l-~~~gi~v~~g 319 (356)
T 1v72_A 264 RNARKANAAAQRLAQGLEGLGG-----------VEVLGG----TEANILFCRLD--------SAMIDAL-LKAGFGFYHD 319 (356)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTT-----------EEEESC----CCSSEEEEEEC--------HHHHHHH-HHTTCBCBCS
T ss_pred HHHHHHHHHHHHHHHHHhhCCC-----------cEEccC----CCccEEEEEcC--------HHHHHHH-HhcCeEEecc
Confidence 3556778888999999987642 566665 35677777652 3566666 5668888766
Q ss_pred ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 784 FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 784 ~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
. +. -+.||+++++.+|.||+.++++-+.++++
T Consensus 320 ~-----~~----------------------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 351 (356)
T 1v72_A 320 R-----WG----------------------------------PNVVRFVTSFATTAEDVDHLLNQVRLAAD 351 (356)
T ss_dssp S-----SS----------------------------------TTEEEEECCTTCCHHHHHHHHHHHHHTC-
T ss_pred c-----cC----------------------------------CCeEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 4 10 02799999999999999999999999764
No 247
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=89.70 E-value=0.57 Score=52.47 Aligned_cols=80 Identities=25% Similarity=0.212 Sum_probs=48.8
Q ss_pred cccceEEEEeccCCCCccChHHHHHHHHHc---CCeEeecccccc----cccCCcccCCCCCcCCCCCCCCCCCCCCcCC
Q 002866 747 ERGAAVAFNVRDKERGLINPEVVQKLAEKE---GISLGIGFLSHI----RILDSPRQQGGSSSLDDTTLCRPMDNGRHDG 819 (872)
Q Consensus 747 ~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~---~IsLr~G~l~~i----~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~ 819 (872)
.+|++|+|++.+ .+..++++.++. +|.++.|..|.. ....+..... .. -...|..
T Consensus 357 g~g~ivsf~l~~------~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~-~~---------~~~~g~~-- 418 (445)
T 1qgn_A 357 GFGGAVSFEVDG------DLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ-SD---------RAKYGIM-- 418 (445)
T ss_dssp CCCSEEEEEESS------CHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCH-HH---------HHTTTCC--
T ss_pred CCCcEEEEEECC------CHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCH-HH---------HHhcCCC--
Confidence 379999999964 345677888766 577778866542 1000000000 00 0011111
Q ss_pred CCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 820 KGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 820 ~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
-+.||+|+| .||+++|++-|.+.++
T Consensus 419 ------~~~iRlSvG----~Edid~li~~L~~al~ 443 (445)
T 1qgn_A 419 ------DNLVRFSFG----VEDFDDLKADILQALD 443 (445)
T ss_dssp ------SSEEEEECC----SSCHHHHHHHHHHHHH
T ss_pred ------CCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 369999999 5899999999988654
No 248
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=89.44 E-value=1.1 Score=47.43 Aligned_cols=130 Identities=11% Similarity=-0.014 Sum_probs=70.8
Q ss_pred hhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC--ccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 704 KTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK--YERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 704 ~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~--~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
....+.+.+.++|...|.++.. ++++++... ...+.++.|.+-+.. ..+...+.+.+.++||.++
T Consensus 254 ~~~~~~~~~~~~l~~~L~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~ 320 (388)
T 1b9h_A 254 EQIAVRDERWTLLSRLLGAIDG-----------VVPQGGDVRADRNSHYMAMFRIPGLT--EERRNALVDRLVEAGLPAF 320 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTT-----------CEECCCCTTCCBCCCSEEEEECTTCC--HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHHHhccCCC-----------ccccCCCcCCCccceEEEEEEeCCcC--cccHHHHHHHHHHCCCCcc
Confidence 3556666788899999987632 577775432 234678899885421 1123334444446899999
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccC-CHHHHHHHHHHHHHhcC
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLT-NFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lS-nFEDVyrl~~Fva~Fld 854 (872)
.|+...... ..+.. -+.. .+ ........-+.. ...--++||.+++..+ |.|||+++++.|.++++
T Consensus 321 ~~~~~~~~~-~~~~~-~~~~-~~-~~~~~~~~~~~~----~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~ 386 (388)
T 1b9h_A 321 AAFRAIYRT-DAFWE-LGAP-DE-SVDAIARRCPNT----DAISSDCVWLHHRVLLAGEPELHATAEIIADAVA 386 (388)
T ss_dssp ECCCCGGGS-HHHHH-SSCC-SS-CHHHHHHTCHHH----HHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred cccCccccC-hHhHh-cCCC-cc-cccccccCCHHH----HHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHh
Confidence 986421000 00000 0000 00 000000000000 0001248999999999 99999999999998653
No 249
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=89.09 E-value=1.1 Score=46.89 Aligned_cols=92 Identities=14% Similarity=0.043 Sum_probs=67.2
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+.+.+.++|...|.++ . +.++.+ +|..+.|.+.+ ++...+.+.+.++||.++
T Consensus 263 ~~~~~~~~~~~~~~l~~~L~~~-~-----------~~~~~~-----~~~~~~~~~~~-----~~~~~l~~~l~~~gi~v~ 320 (360)
T 3hdo_A 263 LSECCRRIRETREWFTTELRSI-G-----------YDVIPS-----QGNYLFATPPD-----RDGKRVYDGLYARKVLVR 320 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-T-----------CEECCC-----SSSEEEEECTT-----CCHHHHHHHHHHTTEECB
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-C-----------CEEcCC-----CccEEEEECCC-----CCHHHHHHHHHHCCEEEE
Confidence 6778888899999999999876 2 355543 57778887654 466777777778899887
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
.|.. . + . -+.||+|++ +.+|+++|++.+.++.+.
T Consensus 321 ~~~~--~----------~----------------~---------~~~iRis~~---~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 321 HFSD--P----------L----------------L---------AHGMRISIG---TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp CCCS--T----------T----------------T---------TTSEEEECC---CHHHHHHHHHHHHHHHC-
T ss_pred ECCC--C----------C----------------C---------CCEEEEEcC---CHHHHHHHHHHHHHHhcc
Confidence 6432 0 0 0 137899987 999999999999997664
No 250
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=88.94 E-value=2.2 Score=44.95 Aligned_cols=96 Identities=10% Similarity=0.046 Sum_probs=70.1
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
++..+..+.+.+.++|...|.++. +++++|. .|..+.+.+-+. + +.+++.++||.+
T Consensus 275 ~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~----~~~~~~~~~~~~-----~---~~~~l~~~gi~v 330 (381)
T 1v2d_A 275 FYEALREGYRRRRDLLAGGLRAMG------------LRVYVPE----GTYFLMAELPGW-----D---AFRLVEEARVAL 330 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT------------CCEECCS----BSSEEEEECTTC-----C---HHHHHHHTCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC------------CEecCCC----cceEEEEecChH-----h---HHHHHHhCCEEE
Confidence 467788899999999999998842 3566653 356777777542 2 888899999999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
+.|..+... . . +-+.||+|++. +.||+.++++-+.++++.
T Consensus 331 ~~g~~~~~~----~---------------------~--------~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 331 IPASAFYLE----D---------------------P--------PKDLFRFAFCK--TEEELHLALERLGRVVNS 370 (381)
T ss_dssp EEGGGGCSS----S---------------------C--------CTTEEEEECCS--CHHHHHHHHHHHHHHC--
T ss_pred ecchHhCCC----C---------------------C--------CCCEEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 988655310 0 0 02389999997 899999999999998764
No 251
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=88.51 E-value=1.8 Score=45.31 Aligned_cols=90 Identities=13% Similarity=0.038 Sum_probs=66.2
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
++..+..+.+.+.++|.+.|.++ . ++++.+ .|..+.+++-+. +...+.+.+.++||.+
T Consensus 275 ~~~~~~~~~~~~~~~l~~~l~~~-g-----------~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v 332 (365)
T 3get_A 275 FTEKTLENNFSQMELYKEFAKKH-N-----------IKIIDS-----YTNFITYFFDEK-----NSTDLSEKLLKKGIII 332 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-T-----------CEECCC-----SSSEEEEECSSS-----CHHHHHHHHHTTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-C-----------CEECCC-----CCeEEEEECCCC-----CHHHHHHHHHHCCEEE
Confidence 35677888888899999999876 2 455554 467777777552 5666666666679999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
+.|..+. -+.||+|++ +.+|+++|++.+.+++
T Consensus 333 ~~g~~~~--------------------------------------~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 333 RNLKSYG--------------------------------------LNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp EECGGGT--------------------------------------CSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred EECccCC--------------------------------------CCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 8875441 128999987 8999999999998865
No 252
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=88.46 E-value=2.2 Score=48.24 Aligned_cols=110 Identities=9% Similarity=0.067 Sum_probs=73.0
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCC--C---C-----
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKE--R---G----- 762 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~--G---~----- 762 (872)
.|..+-.-|+..+-.|...+++++...|.++.. ++++.+. ..+.++|+|.+.... + .
T Consensus 378 al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg-----------~~l~~~~--~p~~~~v~f~~~p~~~~~~~~~~~~~~ 444 (511)
T 3vp6_A 378 MWKAKGTVGFENQINKCLELAEYLYAKIKNREE-----------FEMVFNG--EPEHTNVCFWYIPQSLRGVPDSPQRRE 444 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTT-----------EEESSSS--CCSSSCEEEEECCGGGSSCCCCHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCC-----------EEEEecC--CCCeEEEEEEEeCccccccccchhHHH
Confidence 345555567888889999999999999988643 7888742 246788999876421 0 0
Q ss_pred ---ccChHHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEec-cccCC
Q 002866 763 ---LINPEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASL-GFLTN 838 (872)
Q Consensus 763 ---~v~p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASL-G~lSn 838 (872)
.+...+.++|.++-.+-+.+.... . +.+.+|+++ ...+|
T Consensus 445 ~l~~~~~~l~~~L~~~G~~~~~~~~~~-----------------------------~--------~~~~lRi~~~~~~~t 487 (511)
T 3vp6_A 445 KLHKVAPKIKALMMESGTTMVGYQPQG-----------------------------D--------KANFFRMVISNPAAT 487 (511)
T ss_dssp HHHHHHHHHHHHHHHHTSCEEEEEEET-----------------------------T--------EEEEEEECCCCTTCC
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEEEeC-----------------------------C--------ceEEEEEEecCCCCC
Confidence 012245555555433333211000 0 145899999 79999
Q ss_pred HHHHHHHHHHHHHh
Q 002866 839 FEDVYKLWAFVAKF 852 (872)
Q Consensus 839 FEDVyrl~~Fva~F 852 (872)
.+||+++|+.|.+.
T Consensus 488 ~~di~~ll~~i~~~ 501 (511)
T 3vp6_A 488 QSDIDFLIEEIERL 501 (511)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999874
No 253
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=88.45 E-value=1.6 Score=45.01 Aligned_cols=88 Identities=15% Similarity=0.110 Sum_probs=61.2
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEee
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI 782 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~ 782 (872)
...-.+++...++|.+.|.++. +++|.| .|+.+.|.+.+ ...+.+++.++||.++.
T Consensus 248 ~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~-----~~~~~~~~~~~-------~~~~~~~l~~~gi~v~~ 303 (337)
T 3p1t_A 248 EAHIAKTLAQRRRVADALRGLG------------YRVASS-----EANFVLVENAA-------GERTLRFLRERGIQVKD 303 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT------------CCBCCC-----SSSEEEEECTT-------THHHHHHHHHTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCc------------CEECCC-----CCeEEEEEcCC-------HHHHHHHHHHCCeEEEE
Confidence 3444555566677887887752 233433 46677776543 35677778889999998
Q ss_pred cccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 783 GFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 783 G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
|..+.. -+.||+|++ +.+|+++|++.+.+++.
T Consensus 304 g~~~~~-------------------------------------~~~iRis~~---~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 304 AGQFGL-------------------------------------HHHIRISIG---REEDNDRLLAALAEYSD 335 (337)
T ss_dssp GGGGTC-------------------------------------CSEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred CccCCC-------------------------------------CCeEEEecC---CHHHHHHHHHHHHHHhh
Confidence 865521 138999987 79999999999998764
No 254
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=88.44 E-value=1.9 Score=46.79 Aligned_cols=102 Identities=7% Similarity=-0.023 Sum_probs=70.6
Q ss_pred hhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccC-CCCcc-ChHHHHHHHHHc
Q 002866 699 MLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDK-ERGLI-NPEVVQKLAEKE 776 (872)
Q Consensus 699 ~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~-~G~~v-~p~~VqkLAdr~ 776 (872)
.-.+..+..|.+.+.++|++.|.++.. ++++.|. .|..+.+.+-.. -...+ ...++++|++++
T Consensus 319 ~~~~~~~~~~~~~~~~~l~~~L~~~~g-----------~~~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 383 (427)
T 3dyd_A 319 GEFYHNTLSFLKSNADLCYGALAAIPG-----------LRPVRPS----GAMYLMVGIEMEHFPEFENDVEFTERLVAEQ 383 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTT-----------EEEECCS----BTTEEEEEECGGGCTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-----------ceecCCC----eeEEEEEecCHhhcCCCCCHHHHHHHHHHHC
Confidence 344667778888889999999988632 5666653 355565566421 01112 346778888899
Q ss_pred CCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 777 GISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 777 ~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
||.++.|..+.. -+.+|+|++ ++.|++.++++-+.+++.
T Consensus 384 gV~v~~g~~~~~-------------------------------------~~~iRis~~--~~~e~i~~~l~~l~~~l~ 422 (427)
T 3dyd_A 384 SVHCLPATCFEY-------------------------------------PNFIRVVIT--VPEVMMLEACSRIQEFCE 422 (427)
T ss_dssp CEECEEGGGGTC-------------------------------------TTEEEEESC--SCHHHHHHHHHHHHHHHH
T ss_pred CEEEECCcccCC-------------------------------------CCeEEEEEC--CCHHHHHHHHHHHHHHHH
Confidence 999998865520 128999987 789999999998888653
No 255
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=88.34 E-value=1.9 Score=45.14 Aligned_cols=98 Identities=15% Similarity=0.107 Sum_probs=70.1
Q ss_pred chhhHHHHHHHHHHHHHHHhc-ccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQ-LRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~-LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
+..+..+.+.+.++|...|.+ ++. ++++.|. .|..+.+++.+. | ++..+++++++++||.+
T Consensus 276 ~~~~~~~~~~~~~~l~~~L~~~~~~-----------~~~~~~~----~~~~~~~~~~~~-~--~~~~~~~~l~~~~gi~v 337 (377)
T 3fdb_A 276 LNQEVAYLKNNHDFLLHEIPKRIPG-----------AKITPMQ----ATYLMWIDFRDT-T--IEGSPSEFFIEKAKVAM 337 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTT-----------CEECCCS----BCSEEEEECTTS-C--CCSCHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC-----------ceEecCC----eeEEEEEECccc-C--CCHHHHHHHHHhCCEEe
Confidence 566778888888889888887 432 5677653 233445666542 1 34678899999999999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.|..+... +-+.||+|++ ++.||+.++++-+.+++.
T Consensus 338 ~~g~~~~~~-----------------------------------~~~~~Ris~~--~~~e~i~~~l~~l~~~l~ 374 (377)
T 3fdb_A 338 NDGAWFGED-----------------------------------GTGFCRLNFA--TSREVLEEAIDRMAKAVS 374 (377)
T ss_dssp EEGGGGCGG-----------------------------------GTTEEEEECC--SCHHHHHHHHHHHHHHHT
T ss_pred cCChhccCC-----------------------------------CCCEEEEEeC--CCHHHHHHHHHHHHHHHh
Confidence 998666320 0238999998 489999999999988764
No 256
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=88.28 E-value=1.6 Score=46.80 Aligned_cols=120 Identities=10% Similarity=0.038 Sum_probs=68.6
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccc--eEEEEeccCC---------------CC--
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGA--AVAFNVRDKE---------------RG-- 762 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~--~VAFNv~d~~---------------G~-- 762 (872)
+..+..|.+.+.++|.+.|.++ . ++|++.. ..++. ++.|.+-+.. |.
T Consensus 245 l~~~~~~~~~~~~~l~~~L~~~-~------------~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (394)
T 1o69_A 245 LEQRVLKKREIYEWYKEFLGEY-F------------SFLDELE-NSRSNRWLSTALINFDKNELNACQKDINISQKNITL 310 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT-E------------ECCCCCT-TEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhccc-c------------cccCCCC-CCcceeEEEEEEecchhhcccccccccccccccccc
Confidence 3446688899999999988765 2 4555421 11222 5777774310 11
Q ss_pred ccChHHHHHHHHHcCCeEeecccc---cccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCH
Q 002866 763 LINPEVVQKLAEKEGISLGIGFLS---HIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNF 839 (872)
Q Consensus 763 ~v~p~~VqkLAdr~~IsLr~G~l~---~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnF 839 (872)
-++...+.+.+.++||.+|.|..| .+.+...... ++ ++. ...--..++..++..+|.
T Consensus 311 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~--~~----------~~~--------~~~~~~~~~~~~~~~~t~ 370 (394)
T 1o69_A 311 HPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAY--LN----------GNS--------ELFFQKGICLPSGTAMSK 370 (394)
T ss_dssp CHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEE--EC----------SHH--------HHHHHHEEEECCCTTCCH
T ss_pred ccCHHHHHHHHHHcCCcccccCCccccchhhhccCCC--CC----------hHH--------HHHhcCeEEccCCCCCCH
Confidence 145666666667789999999544 2221110000 00 000 000002444455999999
Q ss_pred HHHHHHHHHHHHhcCc
Q 002866 840 EDVYKLWAFVAKFLNP 855 (872)
Q Consensus 840 EDVyrl~~Fva~Fld~ 855 (872)
|||++|++.|.+++..
T Consensus 371 edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 371 DDVYEISKLILKSIKA 386 (394)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999987654
No 257
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=88.00 E-value=1 Score=46.89 Aligned_cols=90 Identities=13% Similarity=0.095 Sum_probs=63.8
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..|.+.+.++|...|.++. +.++. ..|..+.+++-+ +...+.+.+.++||.++
T Consensus 262 ~~~~~~~~~~~~~~l~~~l~~~~------------~~~~~-----~~~~~~~~~~~~------~~~~~~~~l~~~gi~v~ 318 (354)
T 3ly1_A 262 ITYSKKSNDVSRQILLKALEDLK------------LPYLP-----SEGNFVFHQLVV------PLKDYQTHMADAGVLIG 318 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT------------CCBCC-----CCSSEEEEECSS------CHHHHHHHHHHTTEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC------------CeECC-----CCceEEEEECCC------CHHHHHHHHHHCCEEEe
Confidence 56677888888899998888762 23332 257778777754 45555555567899988
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
|.++. . -+.||+|++ |.+|+.+|++.+.+++..
T Consensus 319 -g~~~~----------------------------~---------~~~iRis~~---~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 319 -RAFPP----------------------------A---------DNWCRISLG---TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp -CCCTT----------------------------C---------TTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred -ecCCC----------------------------C---------CCEEEEEcC---CHHHHHHHHHHHHHHHHh
Confidence 64331 0 138999976 899999999999987653
No 258
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=87.67 E-value=1.7 Score=46.53 Aligned_cols=109 Identities=18% Similarity=0.172 Sum_probs=72.6
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHHH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQK 771 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~Vqk 771 (872)
.|++++.. ..+..+.+.+.++|...|.++.. .++ .+|+++.+.+.+. ... .+.++
T Consensus 299 al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~------------~~~------~~~~~~~~~~~~~----~~~~~~~~~ 354 (409)
T 3kki_A 299 TLEIIESA--DNRRQHLDRMARKLRIGLSQLGL------------TIR------SESQIIGLETGDE----RNTEKVRDY 354 (409)
T ss_dssp HHHHHHHC--HHHHHHHHHHHHHHHHHHHTTTC------------CCC------CSSSEEEEEEESH----HHHHHHHHH
T ss_pred HHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCC------------ccC------CCCCEEEEEeCCH----HHHHHHHHH
Confidence 34544443 56778888999999999988743 222 2788888888641 122 34455
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
|.+ +||.++.++.... .. +-+.||+++++..|.||++++++.+.+
T Consensus 355 L~~-~Gv~v~~~~~~~~------------------------~~----------~~~~iRi~~~~~~t~e~i~~~~~~l~~ 399 (409)
T 3kki_A 355 LES-NGVFGSVFCRPAT------------------------SK----------NKNIIRLSLNSDVNDEQIAKIIEVCSD 399 (409)
T ss_dssp HHH-TTEECEEECTTSS------------------------CT----------TCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHH-CCceEeeeCCCCc------------------------CC----------CCcEEEEEccCCCCHHHHHHHHHHHHH
Confidence 554 4988776432100 00 135999999999999999999999998
Q ss_pred hcCccccccCCCCc
Q 002866 852 FLNPAFVREGALPT 865 (872)
Q Consensus 852 Fld~~f~~~~~~~~ 865 (872)
.++ ...|++
T Consensus 400 ~l~-----~~~~~~ 408 (409)
T 3kki_A 400 AVN-----YGDFYF 408 (409)
T ss_dssp HHH-----HSSCCC
T ss_pred HHh-----cCCCCc
Confidence 654 345654
No 259
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=87.42 E-value=2.4 Score=45.01 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=70.9
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQK 771 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vqk 771 (872)
..|++++. ..+..|++.+.++|...|.++..| ++..+ ...|..+.|.+-+. ...++++
T Consensus 296 ~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~---------~~~~~-----~~~g~~~~~~~~~~-----~~~l~~~ 353 (395)
T 1vef_A 296 AAIRYLER---TRLWERAAELGPWFMEKLRAIPSP---------KIREV-----RGMGLMVGLELKEK-----AAPYIAR 353 (395)
T ss_dssp HHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCT---------TEEEE-----EEETTEEEEEESSC-----SHHHHHH
T ss_pred HHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcC---------ceEEE-----EEEEEEEEEEEcCh-----HHHHHHH
Confidence 45665554 457789999999999999887642 22211 13578899987541 4456666
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
|.+++||.++.|. -+.||+|+++..+.||+.++++-+.+
T Consensus 354 l~~~~gi~v~~~~-----------------------------------------~~~iRi~~~~~~~~~~i~~~~~~l~~ 392 (395)
T 1vef_A 354 LEKEHRVLALQAG-----------------------------------------PTVIRFLPPLVIEKEDLERVVEAVRA 392 (395)
T ss_dssp HHHHHCEECEESS-----------------------------------------TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHCCeEEecCC-----------------------------------------CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 6647788877530 12899999999999999999999988
Q ss_pred hc
Q 002866 852 FL 853 (872)
Q Consensus 852 Fl 853 (872)
++
T Consensus 393 ~l 394 (395)
T 1vef_A 393 VL 394 (395)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 260
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=87.34 E-value=1 Score=46.45 Aligned_cols=92 Identities=5% Similarity=0.037 Sum_probs=62.7
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
++..+..|.+.+.++|.+.| ++.. +++++|. .+..+.+++ +..++++|.++.||.+
T Consensus 265 ~~~~~~~~~~~~~~~l~~~L-~~~~-----------~~~~~~~----~~~~~~~~~--------~~~~~~~l~~~~gi~v 320 (359)
T 1svv_A 265 LFFELGAHSNKMAAILKAGL-EACG-----------IRLAWPS----ASNQLFPIL--------ENTMIAELNNDFDMYT 320 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHTT-----------CCBSSCC----SSSEECBEE--------EHHHHHHHTTTEECEE
T ss_pred hHHHHHHHHHHHHHHHHHHh-ccCC-----------eEEccCC----ccceEEEEc--------CHHHHHHHHHhcCEEE
Confidence 45667888889999999888 5422 4556653 355555544 2467777777668888
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.| .. . . +-+.||+|+++.++.||++++++.+.+++.
T Consensus 321 -~~--~~------~---------------------~--------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 356 (359)
T 1svv_A 321 -VE--PL------K---------------------D--------GTCIMRLCTSWATEEKECHRFVEVLKRLVA 356 (359)
T ss_dssp -EE--EE------T---------------------T--------TEEEEEEECCTTCCHHHHHHHHHHHHHC--
T ss_pred -Ee--cc------c---------------------C--------CCceEEEEccCcCCHHHHHHHHHHHHHHHh
Confidence 11 00 0 0 135899999999999999999999998764
No 261
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=87.10 E-value=1.9 Score=45.43 Aligned_cols=106 Identities=9% Similarity=0.076 Sum_probs=72.9
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQ 770 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~Vq 770 (872)
..|++.+ -++..+..|.+.+.++|.+.|.++.. +++ ..+|+.+.|.+.+. .+. .+++
T Consensus 288 ~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~------------~~~-----~~~~~~~~~~~~~~----~~~~~~~~ 345 (399)
T 3tqx_A 288 KVLELLK-TEGPQLRKQLQENSRYFRAGMEKLGF------------QLV-----PGNHPIIPVMLGDA----QLATNMAD 345 (399)
T ss_dssp HHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHTC------------CBC-----CCSSSEEEEEEECH----HHHHHHHH
T ss_pred HHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcCC------------CcC-----CCCCCEEEEEeCCH----HHHHHHHH
Confidence 3455443 46788999999999999999998843 222 24678888877541 223 3444
Q ss_pred HHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHH
Q 002866 771 KLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVA 850 (872)
Q Consensus 771 kLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva 850 (872)
+|. ++||.++.+..... . . +-..||+|+++.++.||+.++++.+.
T Consensus 346 ~l~-~~gi~v~~~~~~~~-----~-------------------~----------~~~~iRi~~~~~~~~~~i~~~~~~l~ 390 (399)
T 3tqx_A 346 HLL-QEGIYVVGFSYPVV-----P-------------------M----------GKARIRVQMSAVHTQQQLDRAIEAFG 390 (399)
T ss_dssp HHH-HTTEECCEECTTTS-----C-------------------T----------TCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHH-HCCCEEeeeCCCCC-----C-------------------C----------CCceEEEEeecCCCHHHHHHHHHHHH
Confidence 554 47998886532110 0 0 13589999999999999999999999
Q ss_pred HhcC
Q 002866 851 KFLN 854 (872)
Q Consensus 851 ~Fld 854 (872)
+++.
T Consensus 391 ~~~~ 394 (399)
T 3tqx_A 391 QVGK 394 (399)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8653
No 262
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=87.07 E-value=3.1 Score=43.91 Aligned_cols=89 Identities=11% Similarity=0.094 Sum_probs=61.7
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+.+.+.++|...|.++.. +..+.| ..|..+.+.+- +...+.+.+.++||.++
T Consensus 265 ~~~~~~~~~~~~~~l~~~L~~~~~-----------~~~~~~----~~~~~~~~~~~-------~~~~l~~~L~~~gI~v~ 322 (356)
T 1fg7_A 265 MRERVAQIIAEREYLIAALKEIPC-----------VEQVFD----SETNYILARFK-------ASSAVFKSLWDQGIILR 322 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTT-----------EEEECC----CSSSEEEEEET-------THHHHHHHHHHTTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC-----------ceEECC----CCCeEEEEECC-------CHHHHHHHHHHCCEEEE
Confidence 567778888888999999987531 223334 25778877774 34444444478899998
Q ss_pred e-cccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 782 I-GFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 782 ~-G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
. |..+.. -+.+|+|++ +.+|+++|++.+.++
T Consensus 323 ~~g~~~~~-------------------------------------~~~iRis~~---~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 323 DQNKQPSL-------------------------------------SGCLRITVG---TREESQRVIDALRAE 354 (356)
T ss_dssp ECTTSTTC-------------------------------------TTEEEEECC---CHHHHHHHHHHHHTC
T ss_pred ECCCCCCC-------------------------------------CCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 7 643310 127999987 689999999988764
No 263
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=87.02 E-value=1.7 Score=52.66 Aligned_cols=82 Identities=13% Similarity=0.138 Sum_probs=55.0
Q ss_pred CceEEEEeCc-cCcccchhc----HHH-HHHHHHCCcEEEeecccc-C---CCCCccCCCCCCCCcEEEEcccccCCCCC
Q 002866 301 AAGLFVFPVQ-SRVTGAKYS----YQW-MALAQQNHWHVLLDAGSL-G---PKDMDSLGLSLFRPDFIITSFYRVFGFDP 370 (872)
Q Consensus 301 ~T~LVa~p~v-SNvTG~i~P----Le~-I~~Are~G~~VLVDAAQ~-a---G~~mipLDLs~l~~DFlv~S~HK~fG~~P 370 (872)
++..|.+--+ .+..|.+.| ++. .+.|+++|+++++|=+|. . |+ +.-...-...||+++++ |.+|+
T Consensus 594 ~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~-~fa~e~~gv~PDiitls--K~L~g-- 668 (831)
T 4a0g_A 594 HVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGV-ETTTELLGCKPDIACFA--KLLTG-- 668 (831)
T ss_dssp EEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSB-SSTHHHHSSCCSEEEEC--GGGGT--
T ss_pred cEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCC-chhhHhcCCCCcEEEEe--ccccc--
Confidence 4677777775 788898886 553 457799999999997765 2 32 11111112468988654 87753
Q ss_pred Cc---eEEEEEeCCCcccccC
Q 002866 371 TG---FGCLLIKKSVMGSLQN 388 (872)
Q Consensus 371 tG---vG~LyVRk~~i~~L~P 388 (872)
| +|++++++++++.+.+
T Consensus 669 -G~~Plgav~~~~~i~~~~~~ 688 (831)
T 4a0g_A 669 -GMVPLAVTLATDAVFDSFSG 688 (831)
T ss_dssp -TSSCCEEEEECHHHHHTTCS
T ss_pred -CccCcEEEEECHHHHHHHhc
Confidence 4 4999999987766643
No 264
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=86.75 E-value=2.3 Score=45.39 Aligned_cols=102 Identities=13% Similarity=0.074 Sum_probs=69.7
Q ss_pred hhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCC-CCccC-hHHHHHHHHHc
Q 002866 699 MLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKE-RGLIN-PEVVQKLAEKE 776 (872)
Q Consensus 699 ~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~-G~~v~-p~~VqkLAdr~ 776 (872)
.-++..+..|++.+.++|...|.++.. ++++.| ..|..+.+.+-..+ +...+ ..++++|+.++
T Consensus 308 ~~~~~~~~~~~~~~~~~l~~~L~~~~g-----------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 372 (416)
T 1bw0_A 308 QEHLDQIVAKIEESAMYLYNHIGECIG-----------LAPTMP----RGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEE 372 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTT-----------EEECCC----CBTTEEEEEECGGGBSSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC-----------CcccCC----CeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHC
Confidence 345677888899999999999987532 567765 34666777763210 01123 34567777889
Q ss_pred CCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 777 GISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 777 ~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
||.++.|..+.. -+.+|+|++ ++.||+.+.++-+.+++.
T Consensus 373 gi~v~~g~~f~~-------------------------------------~~~iRis~~--~~~e~l~~~l~~l~~~l~ 411 (416)
T 1bw0_A 373 NVQVLPGTIFHA-------------------------------------PGFTRLTTT--RPVEVYREAVERIKAFCQ 411 (416)
T ss_dssp CEECEEGGGGTC-------------------------------------TTEEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred CEEEecccccCC-------------------------------------CCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 999998854410 127999997 689999998888877653
No 265
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=86.53 E-value=2.7 Score=45.11 Aligned_cols=99 Identities=9% Similarity=-0.022 Sum_probs=70.2
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCC--C-ccccceEEEEeccCCCCccChHHHHHHHHHcCC
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKI--K-YERGAAVAFNVRDKERGLINPEVVQKLAEKEGI 778 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~--~-~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~I 778 (872)
+..+..|.+.+.++|...|.++ . ++++.|.. . ...|..+.+++-+ ++...+.+.+.++||
T Consensus 333 ~~~~~~~~~~~~~~l~~~L~~~-g-----------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~gi 395 (437)
T 3g0t_A 333 FRDSVIEYGRKARIMKKMFLDN-G-----------FNIVYDKDGNEPLADGFYFTVGYKG-----MDSSKLIEKFVRYGM 395 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-T-----------EEESSCEETTEECCSSSEEEEEETT-----CCHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-C-----------CEEeccccCCCCCceeEEEEEecCC-----CCHHHHHHHHHHcCe
Confidence 7788889999999999999887 2 56662110 0 1457778888763 455666555556799
Q ss_pred eEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 779 SLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 779 sLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.++.|..+... . -+.||+|++.. |.||+.++++.+.+++
T Consensus 396 ~v~~~~~~~~~--------------------------~---------~~~iRis~~~~-~~e~i~~~~~~l~~~~ 434 (437)
T 3g0t_A 396 CAITLKTTGSK--------------------------R---------NEAMRICTSLL-PESQFPDLEKRLQMLN 434 (437)
T ss_dssp ECEESTTTTCC--------------------------C---------TTCEEEECSSS-CGGGHHHHHHHHHHHH
T ss_pred EEeeccccCCC--------------------------C---------CCEEEEEEecC-CHHHHHHHHHHHHHHH
Confidence 99977555210 0 13799999966 9999999999998864
No 266
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=86.15 E-value=2.3 Score=44.52 Aligned_cols=96 Identities=14% Similarity=0.162 Sum_probs=65.9
Q ss_pred chhhHHHHHHHHHHHHHHHhc-ccCCCCCCCCCceEEEEeCCCCCccccceEE-EEeccCCCCccCh-HHHHHHHHHcCC
Q 002866 702 LNKTTCRLRFLINWLVTSLLQ-LRFSDSDGESRAHLVHIYGPKIKYERGAAVA-FNVRDKERGLINP-EVVQKLAEKEGI 778 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~-LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VA-FNv~d~~G~~v~p-~~VqkLAdr~~I 778 (872)
+..+..|.+.+.++|...|.+ ++. ++++.|. |+.+. +++.+. | ++. .++++|.+++||
T Consensus 284 ~~~~~~~~~~~~~~l~~~l~~~~~~-----------~~~~~~~-----~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi 344 (383)
T 3kax_A 284 LNEIRFYIEDNAKFACEYIKDHIPT-----------LSVMKPE-----GSFLLWIDCSAL-N--LSQDERTKLLEEKGKI 344 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTT-----------CEECCCS-----BSSEEEEECGGG-C--CCHHHHHHHHHHTSCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC-----------ceEecCC-----ceEEEEEEcccc-C--CCHHHHHHHHHhhCCE
Confidence 566778888888999988887 442 5666653 44444 565431 1 344 445566678999
Q ss_pred eEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 779 SLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 779 sLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.++.|..+... + -+.||+|++ ++.||+.++++-+.+++
T Consensus 345 ~v~~g~~~~~~-------------------------~----------~~~iRi~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 345 IVEPGEKYGLG-------------------------G----------EEHIGINIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp ECEESGGGCTT-------------------------C----------TTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred EeECchhhcCC-------------------------C----------CCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 99998665310 0 138999998 68999999999888765
No 267
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=85.75 E-value=7.1 Score=41.50 Aligned_cols=83 Identities=12% Similarity=0.035 Sum_probs=52.0
Q ss_pred cccceEEEEeccCCCCccChHHHHHHHHHcCCeEee---ccc----ccccccCCcccCCCCCcCCCCCCCCCCCCCCcCC
Q 002866 747 ERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI---GFL----SHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDG 819 (872)
Q Consensus 747 ~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~---G~l----~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~ 819 (872)
.+|++++|++.+ . ...+.+++++.||.++. |.. +++....+ |. . . .......|..
T Consensus 295 ~~~~~~~~~~~~-----~-~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~------~~--~-~-~~~~~~~g~~-- 356 (386)
T 1cs1_A 295 GFGAMLSFELDG-----D-EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTH------AG--M-A-PEARAAAGIS-- 356 (386)
T ss_dssp SCCSEEEEEESS-----C-HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTT------TT--S-C-HHHHHHHTCC--
T ss_pred CCceEEEEEECC-----C-HHHHHHHHHhCCcceEcccCCCcceeeeccccccc------cc--C-C-HHHHHhcCCC--
Confidence 469999999864 1 67788888999999983 411 22211000 00 0 0 0000000111
Q ss_pred CCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 820 KGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 820 ~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
-++||+|+|+.++.++|.+|.+++.+..
T Consensus 357 ------~~~iRis~~~~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 357 ------ETLLRISTGIEDGEDLIADLENGFRAAN 384 (386)
T ss_dssp ------TTEEEEECCSSCHHHHHHHHHHHHHHHT
T ss_pred ------CCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 2599999999999999999999998754
No 268
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=85.10 E-value=3.5 Score=43.22 Aligned_cols=96 Identities=14% Similarity=0.119 Sum_probs=65.2
Q ss_pred chhhHHHHHHHHHHHHHHHhc-ccCCCCCCCCCceEEEEeCCCCCccccceEE-EEeccCCCCccChHH-HHHHHHHcCC
Q 002866 702 LNKTTCRLRFLINWLVTSLLQ-LRFSDSDGESRAHLVHIYGPKIKYERGAAVA-FNVRDKERGLINPEV-VQKLAEKEGI 778 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~-LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VA-FNv~d~~G~~v~p~~-VqkLAdr~~I 778 (872)
+..+..+.+.+.++|...|.+ +.. ++++.|. |+.+. +++-+. | ++... +++|.++.||
T Consensus 292 ~~~~~~~~~~~~~~l~~~l~~~~~~-----------~~~~~~~-----~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi 352 (391)
T 4dq6_A 292 LESFLEYLESNIDFAIKYINENMPK-----------LKVRKPE-----GTYLLWVDFSAL-G--LSDEELESILVQKGKV 352 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTT-----------SEECCCS-----BSSEEEEECGGG-C--CCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC-----------CEecCCC-----ccEEEEEEhhhc-C--CCHHHHHHHHHHhCCE
Confidence 567788888889999988887 442 5666653 34444 666531 1 34444 4555555599
Q ss_pred eEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 779 SLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 779 sLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.++.|..+... + -+.||+|++ ++.||+.++++-+.+.+
T Consensus 353 ~v~~g~~~~~~-------------------------~----------~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 353 ALNQGNSFGIG-------------------------G----------SGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp ECEEGGGGCTT-------------------------C----------TTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred EeeCchhhCCC-------------------------C----------CCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 99998655210 0 138999999 68999999999988765
No 269
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=85.05 E-value=5.4 Score=41.43 Aligned_cols=86 Identities=9% Similarity=-0.038 Sum_probs=58.8
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChH-HHHHHHHHcCCeEeeccccccc
Q 002866 711 FLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPE-VVQKLAEKEGISLGIGFLSHIR 789 (872)
Q Consensus 711 ~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~-~VqkLAdr~~IsLr~G~l~~i~ 789 (872)
.+.++|...|.++.. +++|.+ .|..+.+.+-+. +.. ++++|++++||.++.|..+..
T Consensus 255 ~~~~~l~~~L~~~~~-----------~~~~~~-----~~~~~~~~~~~~-----~~~~l~~~L~~~~gi~v~~g~~f~~- 312 (350)
T 3fkd_A 255 RNTVDFITALNRLDG-----------VEVHPS-----GTTFFLLRLKKG-----TAAELKKYMLEEYNMLIRDASNFRG- 312 (350)
T ss_dssp HHHHHHHHHHHHSTT-----------EEECCC-----SSSEEEEEESSS-----CHHHHHHHHHHTTCEECEECTTSTT-
T ss_pred HHHHHHHHHHhcCCC-----------cEECCC-----CCcEEEEECCCC-----CHHHHHHHHHHHCCEEEEeCccCCC-
Confidence 667777878877632 566643 477777777542 444 455555559999998865520
Q ss_pred ccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 790 ILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 790 ~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
. +-+.||+|+| +.+|+++|++.+.+++..
T Consensus 313 -----------~-----------------------~~~~iRis~~---~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 313 -----------L-----------------------DESYVRITTQ---RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp -----------C-----------------------CTTEEEEECC---CHHHHHHHHHHHHHHHTC
T ss_pred -----------C-----------------------CCCEEEEEcC---CHHHHHHHHHHHHHHHHH
Confidence 0 0238999987 889999999999986643
No 270
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=85.02 E-value=3.4 Score=43.29 Aligned_cols=94 Identities=15% Similarity=0.071 Sum_probs=65.0
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
.+..+..+.+.+.++|...|.+++. ++++.+ .|..+.|.+-+ + ...++++|. ++||.+
T Consensus 265 ~~~~~~~~~~~~~~~l~~~L~~~~~-----------~~~~~~-----~g~~~~~~~~~-~----~~~l~~~l~-~~gi~v 322 (364)
T 1lc5_A 265 WQQATWHWLREEGARFYQALCQLPL-----------LTVYPG-----RANYLLLRCER-E----DIDLQRRLL-TQRILI 322 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTT-----------EEECCC-----SSSEEEEEESC-T----TCCHHHHHH-TTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC-----------CEECCC-----CCeEEEEECCC-c----HHHHHHHHH-HCCcEE
Confidence 3566777888888899988887532 566643 57888887753 1 235666666 459999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.|..+.. . +-+.+|+|++ +.+|+++|++.+.+.+.
T Consensus 323 ~~g~~~~~---------------------------~--------~~~~iRis~~---~~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 323 RSCANYPG---------------------------L--------DSRYYRVAIR---SAAQNERLLAALRNVLT 358 (364)
T ss_dssp EECTTSTT---------------------------C--------CTTEEEEECC---CHHHHHHHHHHHHHHC-
T ss_pred eeCcccCC---------------------------C--------CCCEEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 88754420 0 0138999965 79999999999998764
No 271
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=84.93 E-value=1.4 Score=47.28 Aligned_cols=119 Identities=11% Similarity=0.063 Sum_probs=66.4
Q ss_pred hhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccce-EEEEeccCCCCccChHHHHHHHHHcCCeEee
Q 002866 704 KTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAA-VAFNVRDKERGLINPEVVQKLAEKEGISLGI 782 (872)
Q Consensus 704 ~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~-VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~ 782 (872)
.+..|.+.+.++|...|.+++. ++++++. ....++ +.|.+.. .+...|.+.+.++||.++.
T Consensus 275 ~~~~~~~~~~~~l~~~L~~~~g-----------~~~~~~~--~~~~~~~~~~~~~~-----~~~~~l~~~L~~~gI~v~~ 336 (399)
T 2oga_A 275 SWNGRRSALAAEYLSGLAGLPG-----------IGLPVTA--PDTDPVWHLFTVRT-----ERRDELRSHLDARGIDTLT 336 (399)
T ss_dssp HHHHHHHHHHHHHHHHTTTCTT-----------CBCCCCC--TTEECCCSSEEEEC-----SSHHHHHHHHHHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHhccCCC-----------ccccCCC--CCCcceeEEEEEEC-----CCHHHHHHHHHHCCCceec
Confidence 4677888899999999887642 2333321 112222 3566653 2455666666678999998
Q ss_pred cccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 783 GFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 783 G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
++...+.....+.. -+. . ... .+.. ....-.+||+|+++.+|.||++++++.|.++++
T Consensus 337 ~~~~~~~~~~~~~~-~~~---~-~~~-~p~~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 394 (399)
T 2oga_A 337 HYPVPVHLSPAYAG-EAP---P-EGS-LPRA--------ESFARQVLSLPIGPHLERPQALRVIDAVREWAE 394 (399)
T ss_dssp SCSSCGGGSHHHHT-TSC---C-TTS-CHHH--------HHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCccccchhhcc-cCC---C-CCC-ChhH--------HHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHH
Confidence 65211000000000 000 0 000 0000 000125899999999999999999999998653
No 272
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=84.80 E-value=1 Score=49.09 Aligned_cols=94 Identities=11% Similarity=-0.021 Sum_probs=55.1
Q ss_pred EEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEee---cc----cccccccCCcccCCCCCcCCCCCCC
Q 002866 737 VHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI---GF----LSHIRILDSPRQQGGSSSLDDTTLC 809 (872)
Q Consensus 737 V~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~---G~----l~~i~~~d~~~~~~g~~~~~~~~~~ 809 (872)
+.+++|.. ...|++++|.+.+ ....+.+++++.+|-.+. |. .+++.-..+... . ...
T Consensus 301 ~~~~~~~~-~~~g~~~~~~l~~------~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~-------~--~~~ 364 (403)
T 3cog_A 301 HELVKRQC-TGCTGMVTFYIKG------TLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASV-------L--KND 364 (403)
T ss_dssp HHHHHHHC-SCCCSEEEEEESS------CHHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTS-------C--HHH
T ss_pred HHHHHhcC-CCCceEEEEEecC------CHHHHHHHHHhCCcceEccCCCCcceeeecccccccccC-------C--HHH
Confidence 34454432 2469999998754 136788999999986543 42 122210000000 0 000
Q ss_pred CCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 810 RPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 810 ~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
. ...|. .-+.||+|+|+.++.++|.+|.+.+.+.+++
T Consensus 365 ~-~~~g~--------~~~~iRlSvg~e~~~d~i~~l~~al~~~~~~ 401 (403)
T 3cog_A 365 R-DVLGI--------SDTLIRLSVGLEDEEDLLEDLDQALKAAHPP 401 (403)
T ss_dssp H-HHHTC--------CTTEEEEECCSSCHHHHHHHHHHHHHHHCCC
T ss_pred H-HhcCC--------CcCeEEEEeCCCCHHHHHHHHHHHHHHhhcC
Confidence 0 00011 1359999999999999999999999876553
No 273
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=84.69 E-value=2.5 Score=44.87 Aligned_cols=104 Identities=12% Similarity=0.123 Sum_probs=71.4
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQ 770 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~Vq 770 (872)
..|++.+. +..+..+.+.+.++|...|.++. ++++.| +|..+.+.+-+ | ++. .+++
T Consensus 285 ~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~-----~g~~~~~~~~~--~--~~~~~l~~ 341 (398)
T 3a2b_A 285 KALEIIQN--EPEHIEKLWKNTDYAKAQLLDHG------------FDLGAT-----ESPILPIFIRS--N--EKTFWVTK 341 (398)
T ss_dssp HHHHHHHH--CTHHHHHHHHHHHHHHHHHHHTT------------CCBCSC-----CSSEEEEECCC--H--HHHHHHHH
T ss_pred HHHHHHhh--CHHHHHHHHHHHHHHHHHHHhcC------------CCcCCC-----CCCEEEEEcCC--H--HHHHHHHH
Confidence 45555432 56778888899999999998863 233443 37888887732 1 233 3455
Q ss_pred HHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHH
Q 002866 771 KLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVA 850 (872)
Q Consensus 771 kLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva 850 (872)
+|.++ ||.++.|..+... . +-+.||+|++...+.||+.++++-+.
T Consensus 342 ~l~~~-gi~v~~~~~~~~~--------------------------~--------~~~~iRis~~~~~~~e~i~~~~~~l~ 386 (398)
T 3a2b_A 342 MLQDD-GVFVNPVVSPAVP--------------------------A--------EESLIRFSLMATHTYDQIDEAIEKMV 386 (398)
T ss_dssp HHHHT-TEECEEECTTTSC--------------------------G--------GGCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHHHC-CcEEEeeCCCCCC--------------------------C--------CCceEEEEEeCCCCHHHHHHHHHHHH
Confidence 55555 9999987544210 0 02489999999999999999999998
Q ss_pred Hhc
Q 002866 851 KFL 853 (872)
Q Consensus 851 ~Fl 853 (872)
+++
T Consensus 387 ~~l 389 (398)
T 3a2b_A 387 KVF 389 (398)
T ss_dssp HHH
T ss_pred HHH
Confidence 865
No 274
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=84.62 E-value=4.3 Score=42.54 Aligned_cols=98 Identities=17% Similarity=0.077 Sum_probs=67.9
Q ss_pred chhhHHHHHHHHHHHHHHHhc-ccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChH-HHHHHHHHcCCe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQ-LRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPE-VVQKLAEKEGIS 779 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~-LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~-~VqkLAdr~~Is 779 (872)
+..+..+.+.+.++|...|.+ ++. ++++.|. -|..+.+++-+. | ++.. ++++|++++||.
T Consensus 288 ~~~~~~~~~~~~~~l~~~l~~~~~~-----------~~~~~~~----~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi~ 349 (391)
T 3dzz_A 288 LRELKQVLRDNFAYAREFLAKEVPE-----------VKVLDSN----ASYLAWVDISAL-G--MNAEDFCKYLREKTGLI 349 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTT-----------SEECCCC----BSSEEEEECGGG-C--SCHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC-----------cEEeccC----ceEEEEEehhhc-C--CCHHHHHHHHHHhCCEE
Confidence 677788888899999999988 543 5667653 233344555431 1 3444 455565799999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
++.|..+... +-+.||+|++ ++.||+.++++-+.+++.
T Consensus 350 v~~g~~~~~~-----------------------------------~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 387 (391)
T 3dzz_A 350 ISAGNGYRGN-----------------------------------GHEFVRINLA--CPKELVIDGMQRLKQGVL 387 (391)
T ss_dssp CEESGGGCTT-----------------------------------GGGEEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred EeCchhhCCC-----------------------------------CCCEEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 9998655310 0248999999 799999999999988653
No 275
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=84.30 E-value=1.9 Score=51.70 Aligned_cols=118 Identities=7% Similarity=-0.063 Sum_probs=83.7
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCcc-------------------------
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYE------------------------- 747 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~------------------------- 747 (872)
+++++..-|...+-.|+..++.++...|.++..--. ....-++++|||.....
T Consensus 434 A~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (755)
T 2vyc_A 434 AVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFT--ADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWV 511 (755)
T ss_dssp HHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTB
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcccccc--ccccceeeccCchhccccccccccccccccchhccchhhhhc
Confidence 455666665566788999999999999998853000 00124689999864211
Q ss_pred --------------cc------ceEEEEecc--CCCC----ccChHHHHHHHHHcCCeEeecccccccccCCcccCCCCC
Q 002866 748 --------------RG------AAVAFNVRD--KERG----LINPEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSS 801 (872)
Q Consensus 748 --------------RG------~~VAFNv~d--~~G~----~v~p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~ 801 (872)
.| ..|+||+-+ .+|+ =|++..|.+..+++||-++..
T Consensus 512 ~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~------------------ 573 (755)
T 2vyc_A 512 MHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT------------------ 573 (755)
T ss_dssp CCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEE------------------
T ss_pred cCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeec------------------
Confidence 23 478999963 5663 378889988888777654320
Q ss_pred cCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 802 SLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 802 ~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
+...||+++++.+|.+|+.+|++.+.+|.
T Consensus 574 -----------------------~~~~v~~~~~~g~t~~~~~~l~~al~~~~ 602 (755)
T 2vyc_A 574 -----------------------TDFQIMFLFSMGVTRGKWGTLVNTLCSFK 602 (755)
T ss_dssp -----------------------CSSEEEEECCTTCCTTTTHHHHHHHHHHH
T ss_pred -----------------------CCCeEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 13489999999999999999999999874
No 276
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=84.20 E-value=3.3 Score=43.94 Aligned_cols=102 Identities=14% Similarity=0.084 Sum_probs=68.3
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChH-HHHHHHHHcCCe
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPE-VVQKLAEKEGIS 779 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~-~VqkLAdr~~Is 779 (872)
++..+..+.+.+.++|...|.++- | | +++++| ..|..+.|++-+ | ++.. ++++|.++.||.
T Consensus 300 ~~~~~~~~~~~~~~~l~~~L~~~~-~------~---~~~~~~----~~~~~~~~~~~~--~--~~~~~l~~~l~~~~gi~ 361 (407)
T 2zc0_A 300 HLEGALLGYKEKRDIMLKALENHL-P------N---AEFTKP----IAGMFVMFFLPE--G--ADGISFANELMEREGVV 361 (407)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHC-T------T---SCBCCC----SBSSEEEEECST--T--CCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-C------C---CEEecC----CCcEEEEEEcCC--C--CCHHHHHHHHHHhCCeE
Confidence 466778888888888888887631 1 1 344444 246677787743 1 3444 555666666999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
++.|..+... . . +-+.||+|++.. |.||++++++-+.+.++
T Consensus 362 v~~g~~~~~~----~---------------------~--------~~~~iRis~~~~-~~~~i~~~~~~l~~~l~ 402 (407)
T 2zc0_A 362 VVPGKPFYTD----E---------------------S--------GKNAIRLNFSRP-SKEEIPIGIKKLAKLYK 402 (407)
T ss_dssp CBCSGGGCSS----S---------------------C--------CTTEEEEECSSS-CTTHHHHHHHHHHHHHH
T ss_pred EECchhccCC----C---------------------C--------CCCeEEEEeCCC-CHHHHHHHHHHHHHHHH
Confidence 9988655310 0 0 023899999988 89999999999988653
No 277
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=83.76 E-value=2.8 Score=44.83 Aligned_cols=119 Identities=10% Similarity=-0.068 Sum_probs=71.5
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHHHHHHHcCCe
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQKLAEKEGIS 779 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~VqkLAdr~~Is 779 (872)
++..+..+.+.+.++|...|.++. +++++| ..|..+.|++-+..+ ++. .++++|++++||.
T Consensus 284 ~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~----~~g~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~ 345 (411)
T 2o0r_A 284 WVAALRNSLRARRDRLAAGLTEIG------------FAVHDS----YGTYFLCADPRPLGY--DDSTEFCAALPEKVGVA 345 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT------------CEECCC----CBSSEEEEECGGGTC--CCHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC------------CEecCC----CeeEEEEEecCCCCC--CCHHHHHHHHHHhCCEE
Confidence 356678888889999999998762 456665 235578888865311 233 4566678889999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCccccc
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNPAFVR 859 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~~f~~ 859 (872)
++.|..+... .. ..... +. ..+-+.||+|++. +.||+.++++-+.++++. .-.
T Consensus 346 v~~g~~f~~~---~~--~~~~~-~~------------------~~~~~~iRis~~~--~~e~i~~~~~~l~~~~~~-~~~ 398 (411)
T 2o0r_A 346 AIPMSAFCDP---AA--GQASQ-QA------------------DVWNHLVRFTFCK--RDDTLDEAIRRLSVLAER-PAT 398 (411)
T ss_dssp CEEGGGGSCC---C-----------------------------CCGGGCEEEECCS--CHHHHHHHHHHHGGGGC-----
T ss_pred EcChhhhCCC---cc--ccccc-cc------------------cCCCCeEEEEecC--CHHHHHHHHHHHHHHHhc-cCc
Confidence 9988554210 00 00000 00 0013479999974 899999999999997754 333
Q ss_pred cCCCC
Q 002866 860 EGALP 864 (872)
Q Consensus 860 ~~~~~ 864 (872)
+-+|+
T Consensus 399 ~~~~~ 403 (411)
T 2o0r_A 399 GVPRG 403 (411)
T ss_dssp -----
T ss_pred CCCcc
Confidence 33554
No 278
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=82.43 E-value=4.2 Score=42.94 Aligned_cols=99 Identities=10% Similarity=0.002 Sum_probs=67.3
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChH-HHHHHHHHcCCe
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPE-VVQKLAEKEGIS 779 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~-~VqkLAdr~~Is 779 (872)
++..+..+.+.+.++|...|.++. ++++.|. .|..+.+.+-+. + .++.. ++++|++++||.
T Consensus 287 ~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~----~g~~~~~~~~~~-~-~~~~~~~~~~l~~~~gi~ 348 (386)
T 1u08_A 287 HYLALPDFYRQKRDILVNALNESR------------LEILPCE----GTYFLLVDYSAV-S-TLDDVEFCQWLTQEHGVA 348 (386)
T ss_dssp HHHTHHHHHHHHHHHHHHHTTSSS------------CEECCCC----BSSEEEEECTTT-C-CSCHHHHHHHHHHHSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC------------CeecCCC----ceEEEEEecCCC-C-CCCHHHHHHHHHHhCCEE
Confidence 366788888999999998888752 4566652 366788887542 1 13444 456677889999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
++.|..+... . . +-+.||+|++ ++.||+.++++-+.+|
T Consensus 349 v~~g~~f~~~----~-------------------~----------~~~~iRis~~--~~~~~i~~~~~~l~~~ 386 (386)
T 1u08_A 349 AIPLSVFCAD----P-------------------F----------PHKLIRLCFA--KKESTLLAAAERLRQL 386 (386)
T ss_dssp CEEGGGGCSS----C-------------------C----------CSCEEEEECC--SCHHHHHHHHHHHTTC
T ss_pred EeCchHhCCC----C-------------------C----------CCCEEEEEEc--CCHHHHHHHHHHHhhC
Confidence 9987433110 0 0 0248999998 4899999998887654
No 279
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=82.13 E-value=5 Score=43.24 Aligned_cols=98 Identities=12% Similarity=0.177 Sum_probs=68.0
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEE-EEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVA-FNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VA-FNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
+..+..+.+.+.++|...|.++ |. ++++.|. |..+. +++.+. | .-...++++|+++.||.+
T Consensus 322 ~~~~~~~~~~~~~~l~~~L~~~--~~---------i~~~~~~-----~~~~~~v~~~~~-~-~~~~~l~~~l~~~~gi~v 383 (421)
T 3l8a_A 322 LEELKTVIEGNIKLVIKELEAK--TK---------IKVMEPE-----GTYLVWLDFSAY-A-IAQPQLSEKLQNEAKVVL 383 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--CS---------CEEECCS-----BSSEEEEECGGG-T-CCTTHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhC--CC---------ceEeCCC-----eeEEEEEecccc-C-CCHHHHHHHHHHhCCEEE
Confidence 5677788888899999999877 31 5666653 44555 666431 1 113356677778889999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.|..+... +-++||+|++ ++.||+.++++-+.+.++
T Consensus 384 ~~g~~f~~~-----------------------------------~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 384 NDGAHFGKE-----------------------------------GKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp EEGGGGCGG-----------------------------------GTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred ECchhhCCC-----------------------------------CCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 998655210 0238999999 689999999999888653
No 280
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=82.00 E-value=1.3 Score=46.06 Aligned_cols=105 Identities=10% Similarity=-0.010 Sum_probs=69.5
Q ss_pred chhhhhhhhcchhhHHHH--HHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHH
Q 002866 692 RHLDHINMLGLNKTTCRL--RFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVV 769 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~--r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~V 769 (872)
.++++++. .+..|. +.+.++|.+.|.++ . +++++|.. .+|+++.|++- +...+
T Consensus 259 ~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~-----------~~~~~~~~--~~~~~~~~~~~-------~~~~~ 313 (371)
T 2e7j_A 259 ASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-G-----------IKQLGDNP--HNHDLMFFHAE-------VLYEI 313 (371)
T ss_dssp HHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-T-----------CEEESSSS--CCSSEEEEECH-------HHHHH
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-C-----------cEEecCCC--ccCceEEEECC-------CHHHH
Confidence 35555554 677888 88999999999887 2 57777642 26889999874 23444
Q ss_pred HHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEE-Eecccc-CCHHHHHHHHH
Q 002866 770 QKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVT-ASLGFL-TNFEDVYKLWA 847 (872)
Q Consensus 770 qkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVr-ASLG~l-SnFEDVyrl~~ 847 (872)
.+.+.++||.++. ....+. . .|.. -+.|| +|++.. ++.||+.++++
T Consensus 314 ~~~l~~~gi~~~~---~~~~~~--~-------------------~g~~--------~~~iRii~~~~~~~~~~~i~~~~~ 361 (371)
T 2e7j_A 314 SKKAKGGRFFLYR---ELKSRK--I-------------------HGIK--------PGLTRYFKLSTYGLSDEEVDYVLN 361 (371)
T ss_dssp HHHSSSGGGHHHH---HHHHTT--E-------------------ECSC--------TTCCSEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHCCEEEEe---cccccc--c-------------------cCCC--------CCceEEEEeeccCCCHHHHHHHHH
Confidence 4444467777654 110000 0 0000 13789 999998 99999999999
Q ss_pred HHHHhc
Q 002866 848 FVAKFL 853 (872)
Q Consensus 848 Fva~Fl 853 (872)
.+.+++
T Consensus 362 ~l~~~~ 367 (371)
T 2e7j_A 362 AFKEII 367 (371)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998865
No 281
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=81.93 E-value=3.5 Score=44.36 Aligned_cols=97 Identities=6% Similarity=-0.119 Sum_probs=67.7
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCC---------ccccceEEEEeccCCCCccChHHHHHH
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIK---------YERGAAVAFNVRDKERGLINPEVVQKL 772 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~---------~~RG~~VAFNv~d~~G~~v~p~~VqkL 772 (872)
+..+..+.+...++|+..|.++.. +++++|... ...|..+-+++-+ ...+.++
T Consensus 280 ~~~~~~~~~~~~~~l~~~L~~~~~-----------~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~-------~~~~~~~ 341 (391)
T 3bwn_A 280 FKYGREMMKNRWEKLREVVKESDA-----------FTLPKYPEAFCNYFGKSLESYPAFAWLGTKE-------ETDLVSE 341 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSS-----------EECCCCCCEEETTTTEEECCCCSEEEEEESS-------SCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC-----------cccccCCccccccccccCCCcceEEEecCCc-------HHHHHHH
Confidence 455677788888888989987631 566655422 1334456667643 2467888
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
+.++||.++.|..+.. + -+.||+|++ ++.|++.++++-+.++
T Consensus 342 l~~~gV~v~pg~~fg~--------------------------~----------~~~iRis~~--~~~e~i~~~~~~L~~~ 383 (391)
T 3bwn_A 342 LRRHKVMSRAGERCGS--------------------------D----------KKHVRVSML--SREDVFNVFLERLANM 383 (391)
T ss_dssp HHHTTEECEEGGGGTC--------------------------C----------TTEEEEESC--SCHHHHHHHHHHHHSC
T ss_pred HHHCCEEEccCCCCCC--------------------------C----------CCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 8899999999865520 0 137999999 4899999999999887
Q ss_pred cC
Q 002866 853 LN 854 (872)
Q Consensus 853 ld 854 (872)
+.
T Consensus 384 ~~ 385 (391)
T 3bwn_A 384 KL 385 (391)
T ss_dssp C-
T ss_pred HH
Confidence 64
No 282
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=81.81 E-value=7.6 Score=41.85 Aligned_cols=124 Identities=14% Similarity=0.071 Sum_probs=72.4
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeC-CCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCe
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYG-PKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGIS 779 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYG-p~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~Is 779 (872)
++..+..|.+.+.++|...|.++.. +++++ |.....-..++.|++-+.. .-++...+.+.+.++||.
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~g-----------~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~l~~~L~~~gI~ 325 (424)
T 2po3_A 258 AFPEVIDRNRRNHAAYREHLADLPG-----------VLVADHDRHGLNNHQYVIVEIDEAT-TGIHRDLVMEVLKAEGVH 325 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSCTT-----------EEECCGGGGSCCCCCCEEEEECHHH-HSSCHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCC-----------ccccCCCCCCccccEEEEEEECCcc-chhhHHHHHHHHHHCCCc
Confidence 4667888999999999999887643 67776 3211111357777774200 014566777777889999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccc--eeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIR--VEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~--~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
++..+.........+.. .. . .+.+ ...+ -.+||.++....|.||+.++++.|.+++.
T Consensus 326 v~~~~~~~~~~~~~~~~------~g-~-------~~~~----~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~ 384 (424)
T 2po3_A 326 TRAYFSPGCHELEPYRG------QP-H-------APLP----HTERLAARVLSLPTGTAIGDDDIRRVADLLRLCAT 384 (424)
T ss_dssp CBCTTCSCGGGSTTTTT------SC-C-------CCCH----HHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHH
T ss_pred eecccCCccccchhhhh------cC-C-------CCCh----hHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHh
Confidence 98733211100000000 00 0 0000 0000 12477777799999999999999998653
No 283
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=81.52 E-value=0.61 Score=51.52 Aligned_cols=85 Identities=11% Similarity=0.098 Sum_probs=51.5
Q ss_pred cccceEEEEeccCCCCccChHHHHHHHHHcC---CeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCc
Q 002866 747 ERGAAVAFNVRDKERGLINPEVVQKLAEKEG---ISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGF 823 (872)
Q Consensus 747 ~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~---IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~ 823 (872)
..|++|+|++.+ .+++..++++.+..+ |.++.|..|.....-.+... .++ +. ....|..
T Consensus 326 ~~g~i~sf~l~g----~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~-s~~-~~------~~~~g~~------ 387 (415)
T 2fq6_A 326 GSSGLFSFVLKK----KLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHI-AAI-RP------QGEIDFS------ 387 (415)
T ss_dssp CCCSEEEEEESS----CCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHH-HTT-CT------TCCCCCC------
T ss_pred CCceEEEEEECC----CCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCCcc-ccc-cc------hhhcCCC------
Confidence 369999999964 124677888888665 66677855432110000000 000 00 0001211
Q ss_pred cceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 824 IRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 824 ~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
-+.||+|+|+.++.++|..|.+.+.+
T Consensus 388 --~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 388 --GTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp --SCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred --CCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 26999999999999999999998875
No 284
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=81.36 E-value=8.7 Score=41.12 Aligned_cols=99 Identities=19% Similarity=0.117 Sum_probs=65.8
Q ss_pred hhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEee-
Q 002866 704 KTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI- 782 (872)
Q Consensus 704 ~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~- 782 (872)
.+..|.+.|.+.|...|..+.. .++++.| ..|..+.+.+-+. +...+.+++.++||.++.
T Consensus 314 ~~~~~~~~l~~~l~~~l~~~~~----------~~~~~~p----~~g~~~~~~~~~~-----~~~~~~~~l~~~gv~v~~~ 374 (423)
T 3ez1_A 314 IIAPKFRAVDEVLRAELGEGGE----------YATWTLP----KGGYFISLDTAEP-----VADRVVKLAEAAGVSLTPA 374 (423)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTS----------SEEECCC----SBSSCEEEEESSS-----CHHHHHHHHHHTTEECCCT
T ss_pred HHHHHHHHHHHHHHHhcCcCCC----------ceEEeCC----CccEEEEEECCCC-----cHHHHHHHHHHCCcEEecC
Confidence 3445555666666655555441 1566665 3566777777542 567888888999999998
Q ss_pred cccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 783 GFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 783 G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
|.++... . .. .-+.||+|++.+ +.||+.++++-+.+++.
T Consensus 375 g~~~~~~----------~------------~~----------~~~~iRis~~~~-~~~~i~~~~~~l~~~l~ 413 (423)
T 3ez1_A 375 GATYPAG----------Q------------DP----------HNRNLRLAPTRP-PVEEVRTAMQVVAACIR 413 (423)
T ss_dssp TTTSSTT----------C------------CS----------SSCEEEECCSSS-CHHHHHHHHHHHHHHHH
T ss_pred cccccCC----------C------------CC----------CCCeEEEEcCCC-CHHHHHHHHHHHHHHHH
Confidence 5444210 0 00 124899999988 99999999998888654
No 285
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=81.34 E-value=6.6 Score=42.31 Aligned_cols=100 Identities=14% Similarity=0.059 Sum_probs=68.8
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhccc-CCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLR-FSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQ 770 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~Lr-Hp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vq 770 (872)
..|++++. ..+..|++.+.++|...|.+|. +| .+..+- .+|.++.|.+.+ .++...+.
T Consensus 322 aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~---------~~~~~~-----~~g~~~~~~~~~----~~~~~~l~ 380 (429)
T 1s0a_A 322 ASLAILES---GDWQQQVADIEVQLREQLAPARDAE---------MVADVR-----VLGAIGVVETTH----PVNMAALQ 380 (429)
T ss_dssp HHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGGCT---------TEEEEE-----EETTEEEEEESS----CBCHHHHH
T ss_pred HHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCC---------CEEEEE-----EeeEEEEEEECC----cccHHHHH
Confidence 34555544 3467888899999999999884 32 132221 247788888754 14555555
Q ss_pred HHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHH
Q 002866 771 KLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVA 850 (872)
Q Consensus 771 kLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva 850 (872)
+.+.++||.++.+ -+.||+|+++..+.||++++++-+.
T Consensus 381 ~~l~~~Gi~v~~~------------------------------------------~~~iRis~~~~~t~e~i~~~~~~l~ 418 (429)
T 1s0a_A 381 KFFVEQGVWIRPF------------------------------------------GKLIYLMPPYIILPQQLQRLTAAVN 418 (429)
T ss_dssp HHHHHTTEECCCB------------------------------------------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHCCCEEecc------------------------------------------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 5555678776420 0279999999999999999999999
Q ss_pred HhcC
Q 002866 851 KFLN 854 (872)
Q Consensus 851 ~Fld 854 (872)
++++
T Consensus 419 ~~~~ 422 (429)
T 1s0a_A 419 RAVQ 422 (429)
T ss_dssp HHTS
T ss_pred HHHH
Confidence 8764
No 286
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=80.86 E-value=5 Score=43.48 Aligned_cols=96 Identities=14% Similarity=0.062 Sum_probs=68.2
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+++.+.++|.+.|.++. +++++| ..|..+.+.+-+ .=...++++|+++.||.++
T Consensus 343 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~----~~~~~~~~~~~~----~~~~~~~~~l~~~~gI~v~ 402 (449)
T 3qgu_A 343 MNAMIKFYKENAQILKTTFTEMG------------FSVYGG----DDAPYIWVGFPG----KPSWDVFAEILERCNIVTT 402 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT------------CCEEES----SSSSEEEEECTT----SCHHHHHHHHHHHHCEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC------------CeeeCC----CCeeEEEEECCC----CCHHHHHHHHHHHCCEEEe
Confidence 45667788888889999998862 345554 347777777752 1124567788888899999
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.|..+.+. +-+.||+|+ ..+.||+.++++-+.+++.
T Consensus 403 pg~~f~~~-----------------------------------~~~~iRis~--~~~~e~i~~~l~~l~~~~~ 438 (449)
T 3qgu_A 403 PGSGYGPA-----------------------------------GEGFVRASA--FGSRENILEAVRRFKEAYG 438 (449)
T ss_dssp EGGGGCGG-----------------------------------GTTEEEEEC--CSCHHHHHHHHHHHHHHHC
T ss_pred cchHhCCC-----------------------------------CCCeEEEEe--cCCHHHHHHHHHHHHHHHH
Confidence 98655320 023899995 4599999999999988654
No 287
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=80.53 E-value=5.8 Score=42.05 Aligned_cols=107 Identities=10% Similarity=0.017 Sum_probs=75.4
Q ss_pred hcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCe
Q 002866 700 LGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGIS 779 (872)
Q Consensus 700 lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~Is 779 (872)
-++..+..|.+.+.++|...|.++. ++++.|. ..+..+.+.+.+. -++...+.+++.++||.
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~ 347 (425)
T 3ecd_A 286 DDFKTYIDRVLANAQALGDVLKAGG------------VDLVTGG---TDNHLLLVDLRPK---GLKGAQVEQALERAGIT 347 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT------------CEEGGGS---CSSSEEEEECGGG---TCCHHHHHHHHHHTTEE
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhCC------------CeeccCC---CCceEEEEEeCCC---CCCHHHHHHHHHHcCCE
Confidence 3566788899999999999998743 3555442 3567788777541 25678888888999999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCC----HHHHHHHHHHHHHhcCc
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTN----FEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSn----FEDVyrl~~Fva~Fld~ 855 (872)
++.+.... .. . . ......+|++++.+++ .||+.++.+.+.+.++.
T Consensus 348 v~~~~~p~------------~~--~-~----------------~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~ 396 (425)
T 3ecd_A 348 CNKNGIPF------------DP--E-K----------------PTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEA 396 (425)
T ss_dssp CEECCCTT------------CS--S-C----------------TTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecccccCC------------CC--C-C----------------CCCccceeccchhheeccCCHHHHHHHHHHHHHHHhc
Confidence 98765210 00 0 0 0012479999999887 99999999999987654
No 288
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=80.28 E-value=5.7 Score=42.07 Aligned_cols=102 Identities=9% Similarity=-0.048 Sum_probs=68.6
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccC---------hHHHHHH
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLIN---------PEVVQKL 772 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~---------p~~VqkL 772 (872)
+..+..+.+.+.++|...|.++. ++++.| ..|..+.+++.+.. ..++ ..+++++
T Consensus 299 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l 361 (410)
T 3e2y_A 299 FNSLPKELEVKRDRMVRLLNSVG------------LKPIVP----DGGYFIIADVSSLG-ADLSDMNSDEPYDYKFVKWM 361 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT------------CEEEBC----SBSSEEEEECGGGC-CCCTTCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC------------CeecCC----CccEEEEEEchhhh-cccccccccccCHHHHHHHH
Confidence 44567778888888888888762 455655 34556666665421 1122 2778889
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
++++||.+..|..|... .. ...+-+.||+|++. +.||+.++++-+.+|
T Consensus 362 l~~~gv~v~~g~~f~~~---~~---------------------------~~~~~~~iRis~~~--~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 362 TKHKKLTAIPVSAFCDS---KS---------------------------KPHFEKLVRFCFIK--KDSTLDAAEEIFRAW 409 (410)
T ss_dssp HHHHSEECEEGGGGSCT---TT---------------------------HHHHTTEEEEECCC--CHHHHHHHHHHHHTC
T ss_pred HHHcCEEEeCchhhCCC---CC---------------------------CCCCCCEEEEEEcC--CHHHHHHHHHHHHhc
Confidence 99999999998766320 00 00013489999887 999999999988765
No 289
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=80.17 E-value=3.2 Score=45.86 Aligned_cols=94 Identities=10% Similarity=-0.038 Sum_probs=68.4
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKL 772 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkL 772 (872)
++++++..|...+..|.+.|.++|... . ++++++.. +..+.|++.+ ++...+.+.
T Consensus 257 a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g-----------~~~~~~~~----~~~l~i~~~~-----~~~~~l~~~ 311 (446)
T 2x3l_A 257 AAQFYKTYDSTLFFAKRAQLIECLENK-----G-----------FEMLQVDD----PLKLLIKYEG-----FTGHDIQNW 311 (446)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHH-----T-----------CEEEECSS----TTEEEEECTT-----SCHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHc-----C-----------CEECcCCC----CeEEEEEeCC-----cCHHHHHHH
Confidence 577888888887888999999988866 1 45666531 2247887753 456666665
Q ss_pred HHHcCCeEe-ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 773 AEKEGISLG-IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 773 Adr~~IsLr-~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
+.++||.++ .| ...||+++++.+|.+|+ +|++.+.+
T Consensus 312 L~~~GI~v~~~g------------------------------------------~~~iRi~~~~~~t~e~i-~l~~aL~~ 348 (446)
T 2x3l_A 312 FMNAHIYLELAD------------------------------------------DYQALAILPLWHHDDTY-LFDSLLRK 348 (446)
T ss_dssp HHHTTEEESEEC------------------------------------------SSCEEEECCCCCTTCCC-CHHHHHHH
T ss_pred HHHCCCEEEecC------------------------------------------CCEEEEEeecCCCHHHH-HHHHHHHH
Confidence 555588875 21 12689999999999999 99999998
Q ss_pred hcC
Q 002866 852 FLN 854 (872)
Q Consensus 852 Fld 854 (872)
++.
T Consensus 349 ~~~ 351 (446)
T 2x3l_A 349 IED 351 (446)
T ss_dssp HHT
T ss_pred HHH
Confidence 754
No 290
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=79.98 E-value=11 Score=40.49 Aligned_cols=82 Identities=11% Similarity=-0.011 Sum_probs=54.6
Q ss_pred EEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCC
Q 002866 737 VHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGR 816 (872)
Q Consensus 737 V~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~ 816 (872)
+++++| ..|..+.+++-+. .++...+.+.+.++||.++.|..|.+...+. .
T Consensus 357 ~~~~~~----~~g~~~~~~~~~~---~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~------------~---------- 407 (444)
T 3if2_A 357 LMIHKP----EGAIFLWLWFKDL---PISTLDLYERLKAKGTLIVPSEYFFPGVDVS------------D---------- 407 (444)
T ss_dssp EEEECC----CBSSEEEEEETTC---SSCHHHHHHHHHHTTEECEEGGGSCTTCCCT------------T----------
T ss_pred ceEecC----CccEEEEEEcCCC---CCCHHHHHHHHHHCCeEEecchhhcCCCCCc------------c----------
Confidence 567766 3566777776431 2566667777788999999997774310000 0
Q ss_pred cCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 817 HDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 817 ~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
....-+.||+|++. +.||+.++++-+.+++.
T Consensus 408 -----~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~ 438 (444)
T 3if2_A 408 -----YQHAHECIRMSIAA--DEQTLIDGIKVIGEVVR 438 (444)
T ss_dssp -----CSGGGSEEEEESSS--CHHHHHHHHHHHHHHHH
T ss_pred -----cccCCCeEEEEEeC--CHHHHHHHHHHHHHHHH
Confidence 00013589999998 99999999988887654
No 291
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=79.21 E-value=6.4 Score=42.50 Aligned_cols=100 Identities=14% Similarity=0.092 Sum_probs=68.4
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCc---cChHHHHHHHHHcCCe
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGL---INPEVVQKLAEKEGIS 779 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~---v~p~~VqkLAdr~~Is 779 (872)
.....|++...++|...|.++. ++++.| .-|..+.+.+-+..... -...++++|+++.||.
T Consensus 328 ~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~----~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~ 391 (435)
T 3piu_A 328 AENHKRLKQRQKKLVSGLQKSG------------ISCLNG----NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLN 391 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT------------CEECCC----CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcC------------CcccCC----CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEE
Confidence 4566777888888888887652 355543 33567777776521111 1235677788888999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
++.|..+.+. +.+.||++++.+ +.||+.++++-+.+++.
T Consensus 392 v~~g~~~~~~-----------------------------------~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~ 430 (435)
T 3piu_A 392 ISPGSSCHCT-----------------------------------EPGWFRVCFANL-PERTLDLAMQRLKAFVG 430 (435)
T ss_dssp CEEGGGGTCS-----------------------------------STTEEEEECSSS-CHHHHHHHHHHHHHHHH
T ss_pred EeCCcccCCC-----------------------------------CCCEEEEEeeCC-CHHHHHHHHHHHHHHHH
Confidence 9988655320 023899999888 99999999999888654
No 292
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=78.09 E-value=5.2 Score=42.26 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=63.0
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHHHHHHHcCCeEe
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQKLAEKEGISLG 781 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~VqkLAdr~~IsLr 781 (872)
.....|.+.+.++|...|.++.. ++++.|. .|..+.+.+-+ ..++. .++++|++++||.++
T Consensus 306 ~~~~~~~~~~~~~l~~~L~~~~~-----------~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~l~~~~gi~v~ 367 (407)
T 3nra_A 306 EDRIARHQAIRDELLHVLRGCEG-----------VFARTPQ----AGSYLFPRLPK---LAVAPAEFVKILRLQAGVVVT 367 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTT-----------CBCCCCS----BSSEECCBCCC---BSSCHHHHHHHHHHHHCEECE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC-----------ceeccCC----eeEEEEEeCCC---CCCCHHHHHHHHHHhCCEEEe
Confidence 44566778888889988887632 4555543 23444333322 12334 455667788899999
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.|..+.+. +-+.||+|++. +.||+.++++-+.+++
T Consensus 368 ~g~~~~~~-----------------------------------~~~~iRis~~~--~~~~i~~~~~~l~~~~ 402 (407)
T 3nra_A 368 PGTEFSPH-----------------------------------TADSVRLNFSQ--DHEAAVAAARRIVTLV 402 (407)
T ss_dssp EGGGTCTT-----------------------------------CTTBEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred CchhhCCC-----------------------------------CCCEEEEEeCC--CHHHHHHHHHHHHHHH
Confidence 98666320 02389999984 8999999999888765
No 293
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=78.02 E-value=0.64 Score=49.94 Aligned_cols=90 Identities=11% Similarity=0.128 Sum_probs=52.9
Q ss_pred EEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHc---CCeEeeccc----ccccccCCcccCCCCCcCCCCCCC
Q 002866 737 VHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKE---GISLGIGFL----SHIRILDSPRQQGGSSSLDDTTLC 809 (872)
Q Consensus 737 V~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~---~IsLr~G~l----~~i~~~d~~~~~~g~~~~~~~~~~ 809 (872)
+++++|.. ..+|++++|++.+. +..++++.++. +|.++.|.. +++....+... . ..
T Consensus 299 ~~~~~~~~-~~~g~~~~~~~~~~------~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~-------~---~~ 361 (398)
T 2rfv_A 299 YELGQRQM-SLPGGIISFEIAGG------LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPV-------A---PE 361 (398)
T ss_dssp HHHHHHHC-SSCCSEEEEEETTH------HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSS-------C---HH
T ss_pred HHHHHhhC-CCCceEEEEEEcCC------HHHHHHHHHhCCcceeccCCCCcceeeecccccccccC-------C---HH
Confidence 55666542 25799999988641 45677787766 566666632 11110000000 0 00
Q ss_pred CCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 810 RPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 810 ~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
.-...|. .-+.||+|+|+.++.+||++|.+.+.+
T Consensus 362 ~~~~~g~--------~~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 362 ERLKAGI--------TDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp HHHHTTC--------CTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHhcCC--------CCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 0000111 135999999999999999999999876
No 294
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=77.97 E-value=4.3 Score=42.69 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=70.4
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQK 771 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vqk 771 (872)
..|++++..++..+..|.+.+.++|...|.++. ++++. ..|..+.|.+-+ + ++...+.+
T Consensus 278 ~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~-----~~~~~~~~~~~~--~--~~~~~l~~ 336 (384)
T 1bs0_A 278 ASLAVIRSDEGDARREKLAALITRFRAGVQDLP------------FTLAD-----SCSAIQPLIVGD--N--SRALQLAE 336 (384)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS------------CEECS-----CCSSBCCEEEES--H--HHHHHHHH
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC------------CcccC-----CCCCEEEEEeCC--H--HHHHHHHH
Confidence 345655533456788889999999999998762 35553 357777777742 1 33344444
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
.+.++||.++.|..... . . +-+.||+|+++.++.||+.++++-+.+
T Consensus 337 ~l~~~gi~v~~~~~~~~-----~-------------------~----------~~~~~Ri~~~~~~~~~~i~~~~~~l~~ 382 (384)
T 1bs0_A 337 KLRQQGCWVTAIRPPTV-----P-------------------A----------GTARLRLTLTAAHEMQDIDRLLEVLHG 382 (384)
T ss_dssp HHHHTTEECCEECTTSS-----C-------------------T----------TCEEECCBCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHCCcEEEeecCCCC-----C-------------------C----------CCceEEEEEcCCCCHHHHHHHHHHHHh
Confidence 44445998887642100 0 0 024899999999999999999998876
Q ss_pred h
Q 002866 852 F 852 (872)
Q Consensus 852 F 852 (872)
.
T Consensus 383 ~ 383 (384)
T 1bs0_A 383 N 383 (384)
T ss_dssp H
T ss_pred h
Confidence 3
No 295
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=77.83 E-value=5.8 Score=42.10 Aligned_cols=100 Identities=9% Similarity=0.091 Sum_probs=68.2
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhccc--CCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLR--FSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVV 769 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~Lr--Hp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~V 769 (872)
..|++++. ..+..|.+.+.++|.+.|.++. +| ++..+ ..+|..+.|.+-+. .....+
T Consensus 293 ~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~---------~~~~~-----~~~g~~~~~~~~~~----~~~~~l 351 (397)
T 2ord_A 293 TVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYD---------VVADV-----RGMGLMIGIQFREE----VSNREV 351 (397)
T ss_dssp HHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCT---------TEEEE-----EEETTEEEEEECTT----SCHHHH
T ss_pred HHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCC---------ceEEE-----EEEeEEEEEEECCh----HHHHHH
Confidence 34555443 5677889999999999998873 42 12211 13588899987541 234444
Q ss_pred HHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 770 QKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 770 qkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
.+.+.++||.++.|. -+.||+|+++..+.||+.++++-+
T Consensus 352 ~~~l~~~gi~v~~~~-----------------------------------------~~~iRis~~~~~~~e~i~~~~~~l 390 (397)
T 2ord_A 352 ATKCFENKLLVVPAG-----------------------------------------NNTIRFLPPLTVEYGEIDLAVETL 390 (397)
T ss_dssp HHHHHHTTEECEEET-----------------------------------------TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHCCCEEccCC-----------------------------------------CCEEEEECCcCCCHHHHHHHHHHH
Confidence 444444788776540 027999999999999999999999
Q ss_pred HHhc
Q 002866 850 AKFL 853 (872)
Q Consensus 850 a~Fl 853 (872)
.+++
T Consensus 391 ~~~l 394 (397)
T 2ord_A 391 KKVL 394 (397)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8865
No 296
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=77.44 E-value=8.5 Score=41.01 Aligned_cols=97 Identities=14% Similarity=0.087 Sum_probs=68.3
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEE-eccCCCCccCh-HHHHHHHHHcCC
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFN-VRDKERGLINP-EVVQKLAEKEGI 778 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFN-v~d~~G~~v~p-~~VqkLAdr~~I 778 (872)
.+..+..+++.+.++|.+.|.++. +++++|. .|..+.+. +-+ | ++. .++++|++++||
T Consensus 293 ~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~----~~~~~~~~~~~~--~--~~~~~~~~~l~~~~gv 352 (400)
T 3asa_A 293 PQLEAIHYYRENSDLLRKALLATG------------FEVFGGE----HAPYLWVKPTQA--N--ISDRDLFDFFLREYHI 352 (400)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTT------------CEEEECS----SSSEEEEECCCT--T--CCTTTHHHHHHHHHSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC------------CeeeCCC----CceEEEEeccCC--C--CCHHHHHHHHHHhCCE
Confidence 577788889999999999998762 4666653 47778887 432 2 223 577888888999
Q ss_pred eEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 779 SLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 779 sLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.++.|..+... + -+.||+| +.++.||+.++++-+.++++
T Consensus 353 ~v~~g~~f~~~-------------------------~----------~~~iRis--~~~~~e~i~~~l~~l~~~~~ 391 (400)
T 3asa_A 353 AITPGIGFGRS-------------------------G----------SGFVRFS--SLGKREDILAACERLQMAPA 391 (400)
T ss_dssp ECEEGGGGCGG-------------------------G----------TTCEEEE--CCSCHHHHHHHHHHHHC---
T ss_pred EEeChhHhCCC-------------------------C----------CCEEEEE--eeCCHHHHHHHHHHHHHHHH
Confidence 99988655210 0 1268888 47899999999998887653
No 297
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=76.88 E-value=9.6 Score=40.86 Aligned_cols=106 Identities=10% Similarity=0.041 Sum_probs=70.3
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCC--------CccCh-HHHHHH
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKER--------GLINP-EVVQKL 772 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G--------~~v~p-~~VqkL 772 (872)
+..+..+.+.+.++|...|.++. +++++| ..|..+.|.+-+... ..++. .++++|
T Consensus 314 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 377 (429)
T 1yiz_A 314 FNSISGELMAKRDYMASFLAEVG------------MNPTVP----QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWM 377 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT------------CEEEEC----SBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC------------CcccCC----CcceEEEEEcccccccccccccccCCCHHHHHHHH
Confidence 56677888888899998888752 355555 246688888865211 01233 456678
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
++++||.++.|..+... .. . +. +-+.||+|++ ++.||+.++++-+.++
T Consensus 378 ~~~~gv~v~~g~~f~~~----~~--~----------------~~--------~~~~iRis~~--~~~e~i~~~l~~l~~~ 425 (429)
T 1yiz_A 378 TKSVGLQGIPPSAFYSE----PN--K----------------HL--------GEDFVRYCFF--KKDENLQKAAEILRKW 425 (429)
T ss_dssp HHHTSEECBCGGGGSCG----GG--G----------------GG--------TTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHhCCEEEeCchHhCCC----cc--c----------------CC--------CCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 88899999887433210 00 0 00 0248999998 4899999999999988
Q ss_pred cCc
Q 002866 853 LNP 855 (872)
Q Consensus 853 ld~ 855 (872)
++.
T Consensus 426 l~~ 428 (429)
T 1yiz_A 426 KGS 428 (429)
T ss_dssp SCC
T ss_pred ccC
Confidence 753
No 298
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=76.65 E-value=5.5 Score=42.56 Aligned_cols=105 Identities=11% Similarity=0.022 Sum_probs=69.8
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhccc--CCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCC----CccCh
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLR--FSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKER----GLINP 766 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~Lr--Hp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G----~~v~p 766 (872)
.|++++. ..+..|++.+.++|...|..+. +| .+..+- .+|..+.|.+.+... ..+..
T Consensus 311 al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~---------~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~ 373 (426)
T 1sff_A 311 VLKVFEQ---ENLLQKANDLGQKLKDGLLAIAEKHP---------EIGDVR-----GLGAMIAIELFEDGDHNKPDAKLT 373 (426)
T ss_dssp HHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTCT---------TEEEEE-----EETTEEEEEEBGGGCTTSBCHHHH
T ss_pred HHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCC---------CeEEEE-----EEEEEEEEEEecCccccCCChHHH
Confidence 4455544 3567889999999999998875 32 132211 248899999864211 11333
Q ss_pred HHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHH
Q 002866 767 EVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLW 846 (872)
Q Consensus 767 ~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~ 846 (872)
..+.+.+.++||.++.|... -+.||+++++..+.||+.+++
T Consensus 374 ~~l~~~l~~~gi~v~~~~~~---------------------------------------~~~iRi~~~~~~~~~~i~~~~ 414 (426)
T 1sff_A 374 AEIVARARDKGLILLSCGPY---------------------------------------YNVLRILVPLTIEDAQIRQGL 414 (426)
T ss_dssp HHHHHHHHHTTEECEEESTT---------------------------------------SCEEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHCCcEEecCCCC---------------------------------------CCEEEEECCccCCHHHHHHHH
Confidence 44444444579888765320 137999999999999999999
Q ss_pred HHHHHhc
Q 002866 847 AFVAKFL 853 (872)
Q Consensus 847 ~Fva~Fl 853 (872)
+-+.+.+
T Consensus 415 ~~l~~~l 421 (426)
T 1sff_A 415 EIISQCF 421 (426)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998865
No 299
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=75.92 E-value=13 Score=39.26 Aligned_cols=101 Identities=15% Similarity=0.067 Sum_probs=65.2
Q ss_pred chhhHHHHHHHHHHHHHHHhcc-cCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQL-RFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~L-rHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
+..+..+.+...++|...|.++ .. | ++++.| ..|..+.+.+-+ | ++...+.+.+.++||.+
T Consensus 290 ~~~~~~~~~~~~~~l~~~L~~~~~~-------g---~~~~~~----~~g~~~~~~~~~--~--~~~~~~~~~l~~~gi~v 351 (397)
T 2zyj_A 290 LERVRRVYREKAQAMLHALDREVPK-------E---VRYTRP----KGGMFVWMELPK--G--LSAEGLFRRALEENVAF 351 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCT-------T---SEECCC----SBSSEEEEECST--T--CCHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCC-------C---eEEccC----CccEEEEEEcCC--C--CCHHHHHHHHHHCCCEE
Confidence 4456666777777888888763 21 1 355555 347777777743 1 34554544445559999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.|..+... . . +-+.||+|++.. +.||+.++++-+.++++
T Consensus 352 ~~g~~f~~~----~---------------------~--------~~~~iRis~~~~-~~~~i~~~~~~l~~~l~ 391 (397)
T 2zyj_A 352 VPGGPFFAN----G---------------------G--------GENTLRLSYATL-DREGIAEGVRRLGRALK 391 (397)
T ss_dssp EESGGGCTT----S---------------------C--------CTTEEEEECSSS-CHHHHHHHHHHHHHHHH
T ss_pred echHHhcCC----C---------------------C--------CCCeEEEEcCCC-CHHHHHHHHHHHHHHHH
Confidence 988654210 0 0 023899999986 89999999998888653
No 300
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=75.74 E-value=8 Score=40.83 Aligned_cols=88 Identities=11% Similarity=0.014 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeecccc
Q 002866 707 CRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIGFLS 786 (872)
Q Consensus 707 ~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G~l~ 786 (872)
.+.+...++|.+.|.++. ++++.|. -|-.+.+.+-+ .+...+.+.+.++||.++.|..+
T Consensus 307 ~~~~~~~~~l~~~L~~~g------------~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~g~~~ 365 (398)
T 3ele_A 307 NAYKENRDLLYEGLTRIG------------YHCFKPD----GAFYMFVKALE-----DDSNAFCEKAKEEDVLIVAADGF 365 (398)
T ss_dssp HHHHHHHHHHHHHHHHHT------------CCEECCS----BSSEEEEECSS-----SCHHHHHHHHHTTTEECEESGGG
T ss_pred HHHHHHHHHHHHHHHHcC------------CeecCCC----eeEEEEEEcCC-----CCHHHHHHHHHHCCEEEeCcccc
Confidence 455556667777777652 3445542 23336666543 25666666778889999988655
Q ss_pred cccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 787 HIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 787 ~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.. -+.||+|+| ++.||+.++++-+.++++
T Consensus 366 ~~-------------------------------------~~~iRis~~--~~~e~i~~~l~~l~~~l~ 394 (398)
T 3ele_A 366 GC-------------------------------------PGWVRISYC--VDREMIKHSMPAFEKIYK 394 (398)
T ss_dssp TC-------------------------------------TTEEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred CC-------------------------------------CCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 21 128999998 699999999998887653
No 301
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=75.39 E-value=17 Score=38.53 Aligned_cols=81 Identities=11% Similarity=0.010 Sum_probs=53.7
Q ss_pred EEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCC
Q 002866 737 VHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGR 816 (872)
Q Consensus 737 V~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~ 816 (872)
++++.| ..|..+.+++-+. .++...+.+.+.++||.++.|..|.+.....+
T Consensus 331 ~~~~~~----~~g~~~~~~~~~~---~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~---------------------- 381 (417)
T 3g7q_A 331 CLIHKP----EGAIFLWLWFKDL---PITTELLYQRLKARGVLMVPGHYFFPGLDKPW---------------------- 381 (417)
T ss_dssp CEEECC----CBSSEEEEECTTC---SSCHHHHHHHHHHTTEECEEGGGGCTTBSSCC----------------------
T ss_pred ceeeCC----CcceEEEEEcCCC---CCCHHHHHHHHHHCCEEEECchhhCCCCcccc----------------------
Confidence 456665 3466666766431 25667777777889999999977643100000
Q ss_pred cCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 817 HDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 817 ~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
...-+.||+|++. +.||+.++++-+.+.+.
T Consensus 382 ------~~~~~~iRis~~~--~~~~i~~~~~~l~~~l~ 411 (417)
T 3g7q_A 382 ------PHTHQCMRMNYVP--EPDKIEAGVKILAEEIE 411 (417)
T ss_dssp ------GGGGGEEEEESCS--CHHHHHHHHHHHHHHHH
T ss_pred ------ccCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 0013599999996 99999999998888654
No 302
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=74.94 E-value=6.2 Score=43.74 Aligned_cols=108 Identities=14% Similarity=0.047 Sum_probs=66.7
Q ss_pred chhhhhhhhc---chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEE-eCCCCCccccceEEEEeccCCCCccChH
Q 002866 692 RHLDHINMLG---LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHI-YGPKIKYERGAAVAFNVRDKERGLINPE 767 (872)
Q Consensus 692 ~gLdh~d~lG---l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~I-YGp~~~~~RG~~VAFNv~d~~G~~v~p~ 767 (872)
.++.++..+| +..+..+.+.+.++|...|.++.. ++ |++. .-+..++.| ..| ++..
T Consensus 329 aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g~------------~~~~~~~--~~~~~~~~~----~~~--~~~~ 388 (474)
T 1wyu_B 329 RAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGY------------RVPYDGP--SMHEFVAQP----PEG--FRAL 388 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------------BCSSCSS--CCSCEEEBC----STT--CCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc------------EecCCCC--cceEEEEEc----CCC--CCHH
Confidence 4677777666 444577888899999999988622 22 3221 112233333 122 4555
Q ss_pred HHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHH
Q 002866 768 VVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWA 847 (872)
Q Consensus 768 ~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~ 847 (872)
.+.+.+.++||.+.+.. + .. . . -+.+|+|++..+|.||++++++
T Consensus 389 ~l~~~L~~~Gi~~~~~~-----~----~~----------------~--~---------~~~lRis~~~~~t~e~id~~~~ 432 (474)
T 1wyu_B 389 DLAKGLLELGFHPPTVY-----F----PL----------------I--V---------KEALMVEPTETEAKETLEAFAE 432 (474)
T ss_dssp HHHHHHHHTTCCCCEES-----C----ST----------------T--S---------TTCEEECCCTTSCHHHHHHHHH
T ss_pred HHHHHHHHCCccccccc-----c----cc----------------c--c---------CCEEEEEeecCCCHHHHHHHHH
Confidence 55554555698742110 0 00 0 0 1379999999999999999999
Q ss_pred HHHHhcCc
Q 002866 848 FVAKFLNP 855 (872)
Q Consensus 848 Fva~Fld~ 855 (872)
.+.++++.
T Consensus 433 ~L~~~~~~ 440 (474)
T 1wyu_B 433 AMGALLKK 440 (474)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHHh
Confidence 99998764
No 303
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=74.61 E-value=8.5 Score=41.01 Aligned_cols=98 Identities=15% Similarity=0.088 Sum_probs=65.1
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEE-EeccCCCCccCh-HHHHHHHHHcCCe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAF-NVRDKERGLINP-EVVQKLAEKEGIS 779 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAF-Nv~d~~G~~v~p-~~VqkLAdr~~Is 779 (872)
+..+..+.+.+.++|...|.++.. ++++.|. |+.+.| .+-+..| ++. .++++|++++||.
T Consensus 302 ~~~~~~~~~~~~~~l~~~L~~~~~-----------~~~~~~~-----~~~~~~~~~~~~~~--~~~~~l~~~l~~~~gi~ 363 (406)
T 1xi9_A 302 LKEYMKKLKERRDYIYKRLNEIPG-----------ISTTKPQ-----GAFYIFPKIEVGPW--KNDKEFVLDVLHNAHVL 363 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTT-----------EECCCCC-----BSSEECCEECSCSC--SSHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC-----------CeeecCC-----eeEEEEEecCccCC--CCHHHHHHHHHHhCCEE
Confidence 566777888888899989987531 5666542 444444 4432101 233 4556677789999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
++.|..+.. . +-+.||+|++ ++.||+.++++-+.++++
T Consensus 364 v~~g~~f~~-----~------------------------------~~~~lRis~~--~~~~~i~~~~~~l~~~l~ 401 (406)
T 1xi9_A 364 FVHGSGFGE-----Y------------------------------GAGHFRAVFL--PPIEILEEAMDRFEKFMK 401 (406)
T ss_dssp CEEGGGGCG-----G------------------------------GTTBEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred EeCchhcCC-----C------------------------------CCCEEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 988854421 0 0137999998 899999999998888664
No 304
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=74.37 E-value=7.1 Score=41.95 Aligned_cols=101 Identities=11% Similarity=0.070 Sum_probs=67.6
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCC--c-cChHHHHHHHHHcCC
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERG--L-INPEVVQKLAEKEGI 778 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~--~-v~p~~VqkLAdr~~I 778 (872)
+..+..+++...++|...|.++. ++++.| ..|..+.+.+-+.... . -...++++|+++.||
T Consensus 322 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi 385 (428)
T 1iay_A 322 LRESAMRLGKRHKHFTNGLEVVG------------IKCLKN----NAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKL 385 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT------------CCBCCC----SSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC------------CcccCC----CeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCE
Confidence 45567778888888888888762 234443 3466777777542110 0 112456777777799
Q ss_pred eEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 779 SLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 779 sLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.++.|..+... + -+.||+|++ ..+.||+.++++-+.++++
T Consensus 386 ~v~~~~~~~~~-------------------------~----------~~~iRis~~-~~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 386 NVSPGSSFECQ-------------------------E----------PGWFRVCFA-NMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp ECEEGGGGTCS-------------------------S----------SSEEEEECS-SSCHHHHHHHHHHHHHHHH
T ss_pred EEeCchhhCCC-------------------------C----------CCEEEEEEe-cCCHHHHHHHHHHHHHHHh
Confidence 99987554210 0 138999999 5799999999999988653
No 305
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=73.67 E-value=12 Score=39.15 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=61.7
Q ss_pred hhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeec
Q 002866 704 KTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIG 783 (872)
Q Consensus 704 ~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G 783 (872)
.+..|++.+.++|...|.++.. ..+ ...|..+.|.+-+ + ...++++|. ++||.++.|
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~~~---------~~~--------~~~g~~~~~~~~~-~----~~~~~~~l~-~~gi~~~~~ 346 (375)
T 2eh6_A 290 KLLPHVREVGNYFKEKLKELGK---------GKV--------KGRGLMLGLELER-E----CKDYVLKAL-EKGLLINCT 346 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS---------SEE--------EEETTEEEEECSS-C----CHHHHHHHH-HTTEECEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---------CCc--------eEEEEEEEEEEcC-c----HHHHHHHHH-HCCCEEecC
Confidence 6778888999999999988643 112 1357888887754 1 344555555 578877653
Q ss_pred ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 784 FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 784 ~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
. -+.||+|+++..+.||+.++++.+.+.+
T Consensus 347 ~-----------------------------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 347 A-----------------------------------------GKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp T-----------------------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred C-----------------------------------------CCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 0 1279999999999999999999988753
No 306
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=72.81 E-value=2.3 Score=47.61 Aligned_cols=88 Identities=19% Similarity=0.193 Sum_probs=51.3
Q ss_pred EEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHH---HcCCeEeecc----cccccccCCcccCCCCCcCCCCCCC
Q 002866 737 VHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAE---KEGISLGIGF----LSHIRILDSPRQQGGSSSLDDTTLC 809 (872)
Q Consensus 737 V~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAd---r~~IsLr~G~----l~~i~~~d~~~~~~g~~~~~~~~~~ 809 (872)
+++|+|... .+|++++|.+. | ....+++++ ..+|.++.|. .|++........... .
T Consensus 366 ~~~~~~~~~-g~g~~~~~~l~---~----~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~----~----- 428 (464)
T 1ibj_A 366 HHLHFSQAK-GAGSVFSFITG---S----VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAE----V----- 428 (464)
T ss_dssp HHHHTTTCS-CCCSEEEEECS---C----HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSS----S-----
T ss_pred hHHHhccCC-CCceEEEEEEC---C----HHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHH----H-----
Confidence 466766542 46899999983 2 222233443 3688888886 566532211110000 0
Q ss_pred CCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 810 RPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 810 ~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
....|. +-+.||+|+|. ||++++++-+.+.+.
T Consensus 429 -~~~~g~--------~~~~iRlsvg~----edi~~li~~L~~al~ 460 (464)
T 1ibj_A 429 -REARGL--------TEDLVRISAGI----EDVDDLISDLDIAFK 460 (464)
T ss_dssp -SSSSSC--------CTTCEEEECCS----SCHHHHHHHHHHHHH
T ss_pred -HHhcCC--------CcCeEEEEeCC----CCHHHHHHHHHHHHh
Confidence 001111 12589999998 999999999988664
No 307
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=72.64 E-value=18 Score=38.91 Aligned_cols=99 Identities=18% Similarity=0.123 Sum_probs=62.7
Q ss_pred hhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEeec
Q 002866 704 KTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGIG 783 (872)
Q Consensus 704 ~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~G 783 (872)
.+..|.+.|.+.|...|..+.. ++++.|. .|..+.+++-+. +...+.+++.++||.++.|
T Consensus 320 ~~~~~~~~l~~~L~~~l~~~~~-----------~~~~~p~----~g~~~~~~~~~~-----~~~~~~~~l~~~gv~v~~~ 379 (427)
T 3ppl_A 320 SLAPKFNKVLEILDSRLAEYGV-----------AQWTVPA----GGYFISLDVVPG-----TASRVAELAKEAGIALTGA 379 (427)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTC-----------CEECCCS----BSSCEEEECSTT-----CHHHHHHHHHHTTEECCCT
T ss_pred HHHHHHHHHHHHHHHhcCCCCc-----------eEEeCCC----ccEEEEEECCcc-----hHHHHHHHHHHCCCEEecC
Confidence 3445555666665555544322 4555553 477777877552 4666777888899999984
Q ss_pred ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 784 FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 784 ~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
..+... .. . . .-+.||+|++.. +.+|+.++++-+.+++.
T Consensus 380 g~~~~~-----~~----------------~--~--------~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~ 418 (427)
T 3ppl_A 380 GSSYPL-----RQ----------------D--P--------ENKNLRLAPSLP-PVEELEVAMDGVATCVL 418 (427)
T ss_dssp TTTSGG-----GC----------------C--T--------TSCEEEECCSSS-CHHHHHHHHHHHHHHHH
T ss_pred cCcCCC-----CC----------------C--C--------CCCeEEEECCCC-CHHHHHHHHHHHHHHHH
Confidence 332110 00 0 0 024899999887 99999999998888654
No 308
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=72.47 E-value=6.8 Score=41.02 Aligned_cols=95 Identities=15% Similarity=0.144 Sum_probs=62.9
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHHHHHHHcCCe
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQKLAEKEGIS 779 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~VqkLAdr~~Is 779 (872)
.+..+..+.+.+.++|...|.++. +++++|. .|..+.+.+-+ +. .++++|++++||.
T Consensus 274 ~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~----~~~~~~~~~~~------~~~~~~~~l~~~~gi~ 331 (370)
T 2z61_A 274 EINSMIKEFDRRRRLVLKYVKDFG------------WEVNNPI----GAYYVFPNIGE------DGREFAYKLLKEKFVA 331 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT------------CBCCCCC----BTTEECCBCSS------CHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC------------CeecCCC----cceEEEEecCC------CHHHHHHHHHHhCCEE
Confidence 356677788888888888888762 2334442 23334344432 33 4556666689999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
++.|..+.. . +-+.||+|++ ++.||+.++++-+.++++
T Consensus 332 v~~g~~f~~-----~------------------------------~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 332 LTPGIGFGS-----K------------------------------GKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp CEEGGGGCG-----G------------------------------GSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred EeCchhhCC-----C------------------------------CCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 998854421 0 0237999999 699999999999888664
No 309
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=72.36 E-value=13 Score=40.22 Aligned_cols=102 Identities=18% Similarity=0.178 Sum_probs=68.7
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhccc-CCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCc-cCh-HHH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLR-FSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGL-INP-EVV 769 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~Lr-Hp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~-v~p-~~V 769 (872)
.|++++. ..+..|++.+..+|...|.+|. +| ++..+ ..+|.++.|.+.+..... ..+ .++
T Consensus 341 al~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~---------~~~~~-----~~~g~~~~i~~~~~~~~~~~~~~~~~ 403 (449)
T 3a8u_X 341 ALCLLQK---ENLVQSVAEVAPHFEKALHGIKGAK---------NVIDI-----RNFGLAGAIQIAPRDGDAIVRPFEAG 403 (449)
T ss_dssp HHHHHHH---TTHHHHHHHHHHHHHHHHHTTTTST---------TEEEE-----EEETTEEEEEECCBTTBSSHHHHHHH
T ss_pred HHHHHHh---cCHHHHHHHHHHHHHHHHHHHhcCC---------CeEEE-----eeeEEEEEEEEecCcccccccHHHHH
Confidence 4555544 3467889999999999998875 32 22211 246889999886522111 022 344
Q ss_pred HHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 770 QKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 770 qkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
++|. ++||.++.|. .+||+|+.+..+.||++++++-+
T Consensus 404 ~~l~-~~Gv~v~~~g------------------------------------------~~iRis~~~~~t~~~i~~~l~~l 440 (449)
T 3a8u_X 404 MALW-KAGFYVRFGG------------------------------------------DTLQFGPTFNSKPQDLDRLFDAV 440 (449)
T ss_dssp HHHH-HHTEECEEET------------------------------------------TEEEECCCTTCCHHHHHHHHHHH
T ss_pred HHHH-HCCcEEecCC------------------------------------------CEEEEECCCcCCHHHHHHHHHHH
Confidence 5554 5688877530 17899999999999999999999
Q ss_pred HHhcC
Q 002866 850 AKFLN 854 (872)
Q Consensus 850 a~Fld 854 (872)
.+.+.
T Consensus 441 ~~~l~ 445 (449)
T 3a8u_X 441 GEVLN 445 (449)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88653
No 310
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=71.99 E-value=5.5 Score=41.95 Aligned_cols=95 Identities=12% Similarity=0.152 Sum_probs=61.3
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccce-EEEEeccCCCCccCh-HHHHHHHHHcCCe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAA-VAFNVRDKERGLINP-EVVQKLAEKEGIS 779 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~-VAFNv~d~~G~~v~p-~~VqkLAdr~~Is 779 (872)
+..+..+.+.+.++|...|.++.. +++++|. |+. +.+.+.+. | ++. .++++|++++||.
T Consensus 289 ~~~~~~~~~~~~~~l~~~L~~~~g-----------~~~~~~~-----~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi~ 349 (388)
T 1j32_A 289 VQEMLAAFAERRRYMLDALNAMPG-----------LECPKPD-----GAFYMFPSIAKT-G--RSSLDFCSELLDQHQVA 349 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTT-----------CBCCCCC-----BTTEECCBCGGG-T--CCHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCC-----------CcccCCC-----eeEEEEEecCCC-C--CCHHHHHHHHHHhCCEE
Confidence 455677888888999999988632 3455543 332 22233211 1 233 4556676778999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
++.|..+.. -+.||+|++ ++.||+.++++-+.++++
T Consensus 350 v~~g~~~~~-------------------------------------~~~iRis~~--~~~~~i~~~~~~l~~~l~ 385 (388)
T 1j32_A 350 TVPGAAFGA-------------------------------------DDCIRLSYA--TDLDTIKRGMERLEKFLH 385 (388)
T ss_dssp CEEGGGGTC-------------------------------------TTBEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred EeChhhhCC-------------------------------------CCcEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 988754310 026899988 789999999998887653
No 311
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=71.85 E-value=18 Score=37.97 Aligned_cols=88 Identities=11% Similarity=0.009 Sum_probs=63.1
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+.+.+.++|...|.++. ++++. ..|..+.|.+- .+...+.+.+.++||.++
T Consensus 280 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~-----~~~~~~~~~~~------~~~~~l~~~l~~~gi~v~ 336 (369)
T 3cq5_A 280 TLGTVEKLSVERVRVAARLEELG------------YAVVP-----SESNFVFFGDF------SDQHAAWQAFLDRGVLIR 336 (369)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHT------------CEEEC-----CSSSEEEEECC------SSHHHHHHHHHHTTEECB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC------------CEECC-----CCCeEEEEECC------CCHHHHHHHHHHCCEEEE
Confidence 56777888889999998888732 35553 25788888763 345555555568888887
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
.| . . -+.+|+|++ +-+|++++++.+.+.++.
T Consensus 337 ~~---~------~-------------------------------~~~iRis~~---~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 337 DV---G------I-------------------------------AGHLRTTIG---VPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp CC---S------C-------------------------------TTEEEEECC---CHHHHHHHHHHHHHHHTT
T ss_pred EC---C------C-------------------------------CCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 66 0 0 127899998 789999999999987653
No 312
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=71.24 E-value=12 Score=40.47 Aligned_cols=102 Identities=12% Similarity=0.079 Sum_probs=67.9
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcc--cCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQL--RFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQ 770 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~L--rHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vq 770 (872)
.|++++. ..+..|++.+.++|...|.++ ++| .+..+ ..+|..+.|.+.+..+ .....+.
T Consensus 313 ~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~---------~~~~~-----~~~g~~~~v~~~~~~~--~~~~~l~ 373 (420)
T 2pb2_A 313 AFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFD---------IFSDI-----RGMGLLIGAELKPKYK--GRARDFL 373 (420)
T ss_dssp HHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHC---------CEEEE-----EEETTEEEEEECGGGT--TCHHHHH
T ss_pred HHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCC---------CeEEE-----EecceEEEEEECCCch--HHHHHHH
Confidence 3454443 467788999999999999888 443 23221 1358889988754211 1334444
Q ss_pred HHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHH
Q 002866 771 KLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVA 850 (872)
Q Consensus 771 kLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva 850 (872)
+.+.++||-++.|. -.+||+|+.+..+.||++++++-+.
T Consensus 374 ~~l~~~Gi~v~~~~-----------------------------------------~~~iRl~~~~~~t~eei~~~~~~l~ 412 (420)
T 2pb2_A 374 YAGAEAGVMVLNAG-----------------------------------------ADVMRFAPSLVVEEADIHEGMQRFA 412 (420)
T ss_dssp HHHHHTTEECEESS-----------------------------------------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEeCC-----------------------------------------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 44444777666431 1289999999999999999999998
Q ss_pred HhcC
Q 002866 851 KFLN 854 (872)
Q Consensus 851 ~Fld 854 (872)
++++
T Consensus 413 ~~l~ 416 (420)
T 2pb2_A 413 QAVG 416 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8653
No 313
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=70.61 E-value=15 Score=43.94 Aligned_cols=108 Identities=8% Similarity=0.024 Sum_probs=71.9
Q ss_pred hhhhhhh-hcchhhHHHHHHHHHHHHHHHhc-ccCCCCCCCCCceEEEEeCCCCC-------------------------
Q 002866 693 HLDHINM-LGLNKTTCRLRFLINWLVTSLLQ-LRFSDSDGESRAHLVHIYGPKIK------------------------- 745 (872)
Q Consensus 693 gLdh~d~-lGl~~I~~R~r~L~~wLv~~L~~-LrHp~~~~~ng~~LV~IYGp~~~------------------------- 745 (872)
+++++.. .|...+ .|+..++.++...|.+ +.. +++|+|...
T Consensus 408 A~~~l~~~~g~~~~-~~~~~~a~~lr~~L~~~i~g-----------~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (730)
T 1c4k_A 408 NAAMQEGEAGRKLW-HDLLITTIEARKKLIKAGSM-----------FRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKG 475 (730)
T ss_dssp HHHHHSHHHHHHHH-HHHHHHHHHHHHHHHHTTCS-----------SEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTT
T ss_pred HHHHHHhhhhHHHH-HHHHHHHHHHHHHHhhhCCC-----------eEEccccccccccccccccccccccchhhccCcc
Confidence 3444444 454444 6788889999999988 554 678887530
Q ss_pred --------cccc--ce----EEEEecc---CCCC----ccChHHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCC
Q 002866 746 --------YERG--AA----VAFNVRD---KERG----LINPEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLD 804 (872)
Q Consensus 746 --------~~RG--~~----VAFNv~d---~~G~----~v~p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~ 804 (872)
..-| .+ |.|++-+ .+|+ -++...|.+.+.++||-++..
T Consensus 476 ~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~--------------------- 534 (730)
T 1c4k_A 476 AKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKS--------------------- 534 (730)
T ss_dssp CTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEE---------------------
T ss_pred chhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEEC---------------------
Confidence 0011 12 7888732 2222 267788887777778755310
Q ss_pred CCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 805 DTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 805 ~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
+...||+++++.+|.+|+.+|++.|.+|.
T Consensus 535 --------------------~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~ 563 (730)
T 1c4k_A 535 --------------------DLNSILFLMTPAETPAKMNNLITQLLQLQ 563 (730)
T ss_dssp --------------------CSSEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred --------------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 02378999999999999999999998875
No 314
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=70.51 E-value=24 Score=37.04 Aligned_cols=100 Identities=13% Similarity=0.041 Sum_probs=64.9
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+.+...++|...|.++ . .++.| ..|..+.+.+-+ .-...++++|++++||.++
T Consensus 296 ~~~~~~~~~~~~~~l~~~l~~~-~------------~~~~~----~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~ 354 (396)
T 3jtx_A 296 VIDNRRLYQEKFERVIPILQQV-F------------DVKLP----DASFYIWLKVPD----GDDLAFARNLWQKAAIQVL 354 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT-S------------CCCCC----SSSSEEEEECTT----SCHHHHHHHHHHHHCEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C------------CccCC----CeeEEEEEECCC----CCHHHHHHHHHHHCCEEEe
Confidence 4556677777888888888765 2 12223 235566666644 1134566777788999999
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.|..+.... . ... .+-+.||+|++. +.||+.++++-+.+++
T Consensus 355 ~g~~~~~~~---~----------------~~~----------~~~~~iRis~~~--~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 355 PGRFLARDT---E----------------QGN----------PGEGYVRIALVA--DVATCVKAAEDIVSLY 395 (396)
T ss_dssp EGGGGCCCC---T----------------TCC----------TTTTEEEEECCS--CHHHHHHHHHHHHHHC
T ss_pred CChHhCCcc---c----------------ccC----------CCCCeEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 997664310 0 000 012489999986 9999999999888765
No 315
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=70.35 E-value=17 Score=39.75 Aligned_cols=101 Identities=11% Similarity=0.082 Sum_probs=68.4
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKL 772 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkL 772 (872)
.|++++. ..+..|++.+.++|...|.++.+| ++..+ ..+|.++.|.+.+..+ .....+.+.
T Consensus 336 al~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~---------~~~~~-----~~~g~~~~v~l~~~~~--~~~~~l~~~ 396 (439)
T 2oat_A 336 ALEVLEE---ENLAENADKLGIILRNELMKLPSD---------VVTAV-----RGKGLLNAIVIKETKD--WDAWKVCLR 396 (439)
T ss_dssp HHHHHHH---TTHHHHHHHHHHHHHHHHTTSCTT---------TEEEE-----EEETTEEEEEECCCSS--CCHHHHHHH
T ss_pred HHHHHhh---hhHHHHHHHHHHHHHHHHHHhcCC---------CcEEE-----EeeeeEEEEEEecCcc--HHHHHHHHH
Confidence 4555544 356788999999999999998663 12111 2368889998865321 234444444
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
+.++||-++.+ + -.++|.++++..|.||++++++-+.+.
T Consensus 397 l~~~Gv~v~~~-------------------------------~----------~~~iRi~~~~~~t~e~i~~~l~~l~~~ 435 (439)
T 2oat_A 397 LRDNGLLAKPT-------------------------------H----------GDIIRFAPPLVIKEDELRESIEIINKT 435 (439)
T ss_dssp HHHTTEECCBS-------------------------------S----------SSEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHCCeEEecC-------------------------------C----------CCEEEEECccCCCHHHHHHHHHHHHHH
Confidence 44467766531 0 128999999999999999999999886
Q ss_pred c
Q 002866 853 L 853 (872)
Q Consensus 853 l 853 (872)
+
T Consensus 436 l 436 (439)
T 2oat_A 436 I 436 (439)
T ss_dssp H
T ss_pred H
Confidence 5
No 316
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=69.32 E-value=9 Score=40.48 Aligned_cols=98 Identities=14% Similarity=0.056 Sum_probs=66.7
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
...+..|.+.+.++|...|.++... .+++. .....|..+.|.+.+.. ......+.+.+.++||.++
T Consensus 301 ~~~~~~~~~~~~~~l~~~l~~~~~~-------~~~~~-----~~~~~g~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~ 366 (406)
T 4adb_A 301 TPEMLNGVKQRHDWFVERLNTINHR-------YGLFS-----EVRGLGLLIGCVLNADY--AGQAKQISQEAAKAGVMVL 366 (406)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHH-------HCCEE-----EEEEETTEEEEEECTTT--TTCHHHHHHHHHHTTEECE
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHh-------CCCce-----EEEEEEEEEEEEEeCCc--HHHHHHHHHHHHHCCcEEe
Confidence 3678889999999999999887420 01111 01235788999886632 1234444444555588776
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.|. -+.||+++++..+.||+.++++-+.+.+.
T Consensus 367 ~~~-----------------------------------------~~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 398 (406)
T 4adb_A 367 IAG-----------------------------------------GNVVRFAPALNVSEEEVTTGLDRFAAACE 398 (406)
T ss_dssp ESS-----------------------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ecC-----------------------------------------CCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 531 12899999999999999999999988664
No 317
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=69.23 E-value=11 Score=40.27 Aligned_cols=104 Identities=9% Similarity=0.004 Sum_probs=69.7
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCC----------CCccChHHHHH
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKE----------RGLINPEVVQK 771 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~----------G~~v~p~~Vqk 771 (872)
+..+..+.+.+.++|...|.++. ++++.| ..|..+-+++.+.. .+.....++++
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (422)
T 3fvs_A 306 FVQFPQAMQRCRDHMIRSLQSVG------------LKPIIP----QGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKW 369 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT------------CEEEBC----SBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC------------CeecCC----CeeeEEEEechhhcccccccccccccccHHHHHHH
Confidence 45577788888888998888762 456665 34556666654310 11113367888
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
+++++||.+..|..|... ... . .+-+.||+|++. +.||+.++++-+.+
T Consensus 370 ll~~~gv~v~~g~~f~~~----~~~----------------~----------~~~~~iRis~~~--~~e~i~~~l~~l~~ 417 (422)
T 3fvs_A 370 MIKNKGLVAIPVSIFYSV----PHQ----------------K----------HFDHYIRFCFVK--DEATLQAMDEKLRK 417 (422)
T ss_dssp HHHHHCEECEEGGGGSCH----HHH----------------T----------TSCSEEEEECCC--CHHHHHHHHHHHHH
T ss_pred HHHhcCEEEeCcHHhcCC----cCC----------------C----------CCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 899999999999766421 000 0 013489999887 99999999998888
Q ss_pred hc
Q 002866 852 FL 853 (872)
Q Consensus 852 Fl 853 (872)
++
T Consensus 418 ~l 419 (422)
T 3fvs_A 418 WK 419 (422)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 318
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=69.12 E-value=21 Score=38.82 Aligned_cols=102 Identities=11% Similarity=0.019 Sum_probs=68.7
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcc--cCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQL--RFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVV 769 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~L--rHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~V 769 (872)
..|+.++. ..+..|++.+.++|...|.++ .+| ++... ..+|.++.|.+.+.+ .....+
T Consensus 324 aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~---------~~~~~-----~~~g~~~~i~~~~~~---~~~~~~ 383 (433)
T 1z7d_A 324 EALNVLIN---EKLCENAEKLGGPFLENLKRELKDSK---------IVRDV-----RGKGLLCAIEFKNEL---VNVLDI 383 (433)
T ss_dssp HHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCT---------TEEEE-----EEETTEEEEEECTTT---CCHHHH
T ss_pred HHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCC---------CeEEE-----EeeeeEEEEEEccCh---hHHHHH
Confidence 34555443 356788999999999999988 553 12111 236888999876421 234444
Q ss_pred HHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 770 QKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 770 qkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
.+.+.++||-++.+ + -.+||+++++..|.||++++++-+
T Consensus 384 ~~~l~~~Gv~v~~~-------------------------------~----------~~~iRi~~~~~~t~e~i~~~l~~l 422 (433)
T 1z7d_A 384 CLKLKENGLITRDV-------------------------------H----------DKTIRLTPPLCITKEQLDECTEII 422 (433)
T ss_dssp HHHHHHTTEECCEE-------------------------------T----------TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHCCeEEecC-------------------------------C----------CCEEEEECCcCCCHHHHHHHHHHH
Confidence 44444568876543 0 128999999999999999999999
Q ss_pred HHhcC
Q 002866 850 AKFLN 854 (872)
Q Consensus 850 a~Fld 854 (872)
.+++.
T Consensus 423 ~~~l~ 427 (433)
T 1z7d_A 423 VKTVK 427 (433)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88653
No 319
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=69.03 E-value=13 Score=39.22 Aligned_cols=98 Identities=16% Similarity=0.144 Sum_probs=64.1
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~VqkLAdr~~IsL 780 (872)
+..+..+.+.+.++|...|.++.. +.++.|. -|..+.+++-+. + ++. .++++|++++||.+
T Consensus 281 ~~~~~~~~~~~~~~l~~~l~~~~~-----------~~~~~~~----~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi~v 342 (391)
T 3h14_A 281 LQANLDVYKANRKLMLERLPKAGF-----------TRIAPPD----GAFYVYADVSDL-T--DDSRAFAAEILEKAGVAV 342 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-----------CCBCCCC----BTTEEEEECTTT-C--SCHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC-----------CcccCCC----eeEEEEEecCcc-C--CCHHHHHHHHHHHCCEEE
Confidence 556778888888899988887643 1122221 233444455321 1 233 45677788889999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
+.|..|... . +-+.||+|++. +.||+.++++-+.+++
T Consensus 343 ~~g~~~~~~--------------------------~--------~~~~iRis~~~--~~~~i~~~l~~l~~~~ 379 (391)
T 3h14_A 343 TPGLDFDPE--------------------------R--------GAGTLRFSYAR--ATADIEEGLDRLEAFM 379 (391)
T ss_dssp EEGGGTCTT--------------------------T--------GGGEEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred cCchhhCCC--------------------------C--------CCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 998766320 0 13489999998 6799999998888754
No 320
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=68.84 E-value=14 Score=41.16 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=65.4
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcc--cCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChH-HH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQL--RFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPE-VV 769 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~L--rHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~-~V 769 (872)
.|+.+.. ..+..|++.+.++|...|.+| +||. +|.-. ..+|.++.|++.+. ..+. ++
T Consensus 367 al~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~--------~v~~~-----~~~g~~~~~~~~~~----~~~~~~~ 426 (472)
T 1ohv_A 367 VINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQ--------FISRV-----RGRGTFCSFDTPDE----SIRNKLI 426 (472)
T ss_dssp HHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTT--------TCEEE-----EEETTEEEEECSSH----HHHHHHH
T ss_pred HHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCC--------cEEee-----cCCceEEEEEeCCh----hHHHHHH
Confidence 4555544 346789999999999999988 4542 01101 13588999977431 1223 33
Q ss_pred HHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 770 QKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 770 qkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
++|. ++||.++.+. -.+||.|+++.+|.|||+++++-+
T Consensus 427 ~~l~-~~Gv~~~~~g-----------------------------------------~~~iRi~~~~~~t~e~i~~~~~~l 464 (472)
T 1ohv_A 427 SIAR-NKGVMLGGCG-----------------------------------------DKSIRFRPTLVFRDHHAHLFLNIF 464 (472)
T ss_dssp HHHH-HTTEECEEET-----------------------------------------TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred HHHH-HCCeEEecCC-----------------------------------------CCEEEEECCCCCCHHHHHHHHHHH
Confidence 4443 4566554310 128999999999999999999999
Q ss_pred HHhcC
Q 002866 850 AKFLN 854 (872)
Q Consensus 850 a~Fld 854 (872)
.+++.
T Consensus 465 ~~~l~ 469 (472)
T 1ohv_A 465 SDILA 469 (472)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88653
No 321
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=68.84 E-value=26 Score=37.67 Aligned_cols=97 Identities=15% Similarity=0.141 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEee-c
Q 002866 705 TTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI-G 783 (872)
Q Consensus 705 I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~-G 783 (872)
+..|.+.|.++|...|..+. .++++.| ..|..+-+.+-+. +...+.+++.++||.++. |
T Consensus 319 ~~~~~~~l~~~L~~~l~~~~-----------~~~~~~p----~~g~~~~~~~~~~-----~~~~~~~~l~~~gV~v~~~g 378 (422)
T 3d6k_A 319 LAPKFERVLEILDSRLSEYG-----------VAKWTSP----TGGYFISVDVVPG-----TASRVVELAKEAGIALTGAG 378 (422)
T ss_dssp HHHHHHHHHHHHHHHHGGGT-----------CEEECCC----SBSSCEEEEESTT-----CHHHHHHHHHHTTEECCCTT
T ss_pred HHHHHHHHHHHHHHhcCcCC-----------ceEEeCC----CcceEEEEECCCC-----CHHHHHHHHHHCCeEEEcCc
Confidence 33444455555554444332 1566655 3466777777542 567788888999999998 4
Q ss_pred ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 784 FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 784 ~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
..+... . . . .-+.||+|++. .+-||+.++++-+.+++.
T Consensus 379 ~~f~~~----~---------~---------~----------~~~~iRis~~~-~~~e~i~~~~~~l~~~l~ 416 (422)
T 3d6k_A 379 SSFPLH----N---------D---------P----------NNENIRLAPSL-PPVAELEVAMDGFATCVL 416 (422)
T ss_dssp TTSGGG----C---------C---------T----------TSCEEEECCSS-SCHHHHHHHHHHHHHHHH
T ss_pred cccCCC----C---------C---------C----------CCCeEEEecCC-CCHHHHHHHHHHHHHHHH
Confidence 333110 0 0 0 02479999999 999999999999988653
No 322
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=68.46 E-value=16 Score=39.24 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=65.6
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+++...++|.+.|.++. +++++| ..|..+.+.+-+ .-...++++|+++.||.++
T Consensus 331 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~----~~~~~~~~~~~~----~~~~~~~~~ll~~~gv~v~ 390 (432)
T 3ei9_A 331 MHKVIGFYKENTNIIIDTFTSLG------------YDVYGG----KNAPYVWVHFPN----QSSWDVFAEILEKTHVVTT 390 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT------------CCEEEC----SSSSEEEEECTT----SCHHHHHHHHHHHHCEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC------------ceecCC----CcceEEEEECCC----CCHHHHHHHHHHHCCEEEe
Confidence 45667788888889998888762 355654 356778777753 1234567888888999999
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
.|..+.+. +-+.||+|| .++.||+.+.++=+.+
T Consensus 391 ~g~~f~~~-----------------------------------~~~~iRis~--~~~~e~l~~~l~rl~~ 423 (432)
T 3ei9_A 391 PGSGFGPG-----------------------------------GEGFVRVSA--FGHRENILEACRRFKQ 423 (432)
T ss_dssp EGGGGCGG-----------------------------------GTTEEEEEC--CSCHHHHHHHHHHHHH
T ss_pred CchHhCCC-----------------------------------CCCEEEEEe--cCCHHHHHHHHHHHHH
Confidence 88654210 023899996 5699999988877665
No 323
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=67.84 E-value=22 Score=38.26 Aligned_cols=104 Identities=13% Similarity=0.054 Sum_probs=67.5
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~VqkLAdr~~IsL 780 (872)
+..+..+.+...++|.+.|.++- |.. .| +++++| ..|..+.+.+-+ | ++. .++++|.++ ||.+
T Consensus 313 ~~~~~~~~~~~~~~l~~~L~~~~-~~~---~g---~~~~~~----~~g~~~~~~~~~--~--~~~~~l~~~l~~~-gi~v 376 (425)
T 1vp4_A 313 LKPTIELYRRKRTVMLNALEEYF-SDI---PG---VKWVKS----EGGLFIWLTLPE--G--FDTWEMFEYAKRK-KVFY 376 (425)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHS-TTS---TT---CEECCC----SBSSEEEEECCT--T--CCTTTTHHHHHHH-TEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCC---Cc---eEEecC----CccEEEEEEcCC--C--CCHHHHHHHHHHC-CCEE
Confidence 45666777777888888887742 100 01 456655 346778887753 1 223 456666665 9999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
+.|..+... . . +-+.+|+|++.. +.||+.++++-+.+++..
T Consensus 377 ~~g~~f~~~----~---------------------~--------~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~ 417 (425)
T 1vp4_A 377 VPGRVFKVY----D---------------------E--------PSPSMRLSFCLP-PDEKIVEGIKRLREVVLE 417 (425)
T ss_dssp EEGGGGCTT----C---------------------C--------CCSEEEEECSSS-CHHHHHHHHHHHHHHHHH
T ss_pred ECchhhcCC----C---------------------C--------CCCeEEEEeCCC-CHHHHHHHHHHHHHHHHH
Confidence 988654210 0 0 024899999986 899999999999887643
No 324
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=66.99 E-value=25 Score=37.18 Aligned_cols=93 Identities=14% Similarity=0.065 Sum_probs=64.1
Q ss_pred hhhHHHHHHHHHHHHHHHhccc--CCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 703 NKTTCRLRFLINWLVTSLLQLR--FSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~Lr--Hp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
..+..|++.+..++.+.|.++. || .+..+ ..+|..+.|.+.+. .....+.+.+.++||.+
T Consensus 299 ~~~~~~~~~~~~~~~~~l~~~~~~~~---------~~~~~-----~~~g~~~~~~~~~~----~~~~~~~~~l~~~Gi~v 360 (395)
T 3nx3_A 299 EKILENVNKLTPYLEQSLDELINEFD---------FCKKR-----KGLGFMQGLSLDKS----VKVAKVIQKCQENALLL 360 (395)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCT---------TEEEE-----EEETTEEEEEECTT----SCHHHHHHHHHHTTEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCC---------CeEEE-----EeEEEEEEEEeCCc----chHHHHHHHHHHCCCEE
Confidence 4566777888888888887763 32 12111 23578888888652 23455555566678877
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.|. -+.||+++++..|.||++++++-+.+.+.
T Consensus 361 ~~~~-----------------------------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 361 ISCG-----------------------------------------ENDLRFLPPLILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp EEET-----------------------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ecCC-----------------------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 6541 12899999999999999999999988653
No 325
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=66.90 E-value=16 Score=40.01 Aligned_cols=97 Identities=11% Similarity=-0.033 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEE--eC-CC----C---CccccceEEEEeccCCCCccChHHHHHHHH
Q 002866 705 TTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHI--YG-PK----I---KYERGAAVAFNVRDKERGLINPEVVQKLAE 774 (872)
Q Consensus 705 I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~I--YG-p~----~---~~~RG~~VAFNv~d~~G~~v~p~~VqkLAd 774 (872)
...+++...++|+..|.+++. +.+ |+ |. . ..+-|..+-+++-+ -...++++|++
T Consensus 318 ~~~~~~~~~~~l~~~L~~~~g-----------~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-----~~~~~~~~ll~ 381 (427)
T 2hox_A 318 GFKKLRERWVNITALLDQSDR-----------FSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-----EEDKDCYQTFQ 381 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTSSS-----------EECCCCCSCEEETTTTEEECCCCSEEEEEECS-----GGGCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcC-----------ccccccccccccccccccCCCCceEEEEECCC-----cHHHHHHHHHH
Confidence 345566667778888887642 333 33 32 1 12234444456643 13457788888
Q ss_pred HcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 775 KEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 775 r~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
++||.++.|..+.. + -+.||+|++ ++.|++.++++-+.++++
T Consensus 382 ~~gI~v~pg~~f~~--------------------------~----------~~~~Ris~~--~~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 382 NGRINTQNGVGFEA--------------------------S----------SRYVRLSLI--KTQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp HTTEECEEGGGGTS--------------------------C----------TTEEEEECS--SCHHHHHHHHHHHHHHHT
T ss_pred HCCEEEcCCCccCC--------------------------C----------CCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 99999999865521 0 137999999 488999999998888764
Q ss_pred c
Q 002866 855 P 855 (872)
Q Consensus 855 ~ 855 (872)
.
T Consensus 424 ~ 424 (427)
T 2hox_A 424 A 424 (427)
T ss_dssp C
T ss_pred h
Confidence 3
No 326
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=65.65 E-value=20 Score=38.52 Aligned_cols=111 Identities=19% Similarity=0.116 Sum_probs=64.5
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcc--cCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCc-cC----
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQL--RFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGL-IN---- 765 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~L--rHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~-v~---- 765 (872)
.|++++. ..+..+++.+..++.+.|.++ +|| .+..+ .-+|..+.|.+.+.+... ..
T Consensus 309 al~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~---------~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~ 371 (430)
T 3i4j_A 309 VLDIVER---EDLTGAAKERGAQLLAGLQALQARFP---------QMMQV-----RGTGLLLGVVLGDLATGQAFETPGI 371 (430)
T ss_dssp HHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCT---------TEEEE-----EEETTEEEEEEC------------C
T ss_pred HHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCC---------CeEEE-----EEEEEEEEEEeccccccCCCccHHH
Confidence 3454433 456667777777777777776 443 13222 235888888887543211 11
Q ss_pred hHHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHH
Q 002866 766 PEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKL 845 (872)
Q Consensus 766 p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl 845 (872)
...+.+.+-++||.++.+..... |. +-..||+++++..+.||+.++
T Consensus 372 ~~~~~~~l~~~Gv~v~~~~~~~~--------------------------~~--------~~~~iRi~~~~~~t~e~i~~~ 417 (430)
T 3i4j_A 372 ASRIGAAALKRGLITYPGSGAEP--------------------------NG--------RGDHLLLGPPLSITAAEVDGL 417 (430)
T ss_dssp HHHHHHHHHHTTEECC---------------------------------------------CEEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEecccccC--------------------------CC--------CCCEEEEECCCCCCHHHHHHH
Confidence 23444455578888876521110 00 023899999999999999999
Q ss_pred HHHHHHhcC
Q 002866 846 WAFVAKFLN 854 (872)
Q Consensus 846 ~~Fva~Fld 854 (872)
++-+.+++.
T Consensus 418 l~~l~~~l~ 426 (430)
T 3i4j_A 418 LALLAGALE 426 (430)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988764
No 327
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=65.34 E-value=17 Score=39.74 Aligned_cols=101 Identities=18% Similarity=0.100 Sum_probs=66.9
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhcc--cCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHH
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQL--RFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQ 770 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~L--rHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vq 770 (872)
.|++++. ..+..|++.+.++|...|.+| ++|. ++..+ ..+|.++.|.+.+. .....+++
T Consensus 344 al~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~--------~~~~~-----~~~g~~~~~~~~~~---~~~~~~~~ 404 (449)
T 2cjg_A 344 ILEVIEA---EGLFERAVQHGKYLRARLDELAADFPA--------VVLDP-----RGRGLMCAFSLPTT---ADRDELIR 404 (449)
T ss_dssp HHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTT--------TSEEE-----EEETTEEEEECSSH---HHHHHHHH
T ss_pred HHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCC--------ceeeE-----eeccEEEEEEECCh---HHHHHHHH
Confidence 4565544 346688899999999999988 3531 01111 13688999877531 01223444
Q ss_pred HHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHH
Q 002866 771 KLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVA 850 (872)
Q Consensus 771 kLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva 850 (872)
+|. ++||-++.|. -++||.|+.+..|.||++++++-+.
T Consensus 405 ~l~-~~Gv~v~~~g-----------------------------------------~~~iRi~~~~~~t~e~i~~~l~~l~ 442 (449)
T 2cjg_A 405 QLW-QRAVIVLPAG-----------------------------------------ADTVRFRPPLTVSTAEIDAAIAAVR 442 (449)
T ss_dssp HHH-HTTEECEEET-----------------------------------------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHH-HCCeEEecCC-----------------------------------------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 454 5677665430 1289999999999999999999998
Q ss_pred HhcC
Q 002866 851 KFLN 854 (872)
Q Consensus 851 ~Fld 854 (872)
+++.
T Consensus 443 ~~l~ 446 (449)
T 2cjg_A 443 SALP 446 (449)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8653
No 328
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=64.90 E-value=15 Score=39.12 Aligned_cols=101 Identities=15% Similarity=0.042 Sum_probs=65.4
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+.+.+.++|...|.++. ++++.|. -|..+.+.+-+.-+..-...++++|++++||.++
T Consensus 297 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 360 (412)
T 2x5d_A 297 VRDIARQYQQRRDVLVKGLREAG------------WMVENPK----ASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVS 360 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT------------CCCCCCS----BSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC------------CEecCCC----eeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEe
Confidence 45677788888888888888762 2334332 2345666663210000123566777788899999
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
.|..+... +-+.||+|++. +.||+.++++-+.++++.
T Consensus 361 ~g~~f~~~-----------------------------------~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 397 (412)
T 2x5d_A 361 PGIGFGDY-----------------------------------GDDHVRFALIE--NRDRLRQAVRGIKAMFRA 397 (412)
T ss_dssp EGGGGCGG-----------------------------------GTTEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCC-----------------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 88655210 02389999997 789999999998887654
No 329
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=63.59 E-value=44 Score=34.91 Aligned_cols=94 Identities=13% Similarity=0.069 Sum_probs=61.2
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChH-HHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPE-VVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~-~VqkLAdr~~IsL 780 (872)
+..+..+.+.+.++|...|.++ - +++.|. .|-.+.+.+-+ + ++.. ++++|.++ ||.+
T Consensus 282 ~~~~~~~~~~~~~~l~~~L~~~-~------------~~~~~~----~~~~~~~~~~~--~--~~~~~~~~~l~~~-gi~v 339 (376)
T 2dou_A 282 VRGYARVYRERALGMAEALKGV-L------------SLLPPR----ATMYLWGRLPE--G--VDDLEFGLRLVER-GVAL 339 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT-S------------EECCCC----BSSEEEEECCT--T--CCHHHHHHHHHHT-TEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-c------------CccCCC----eeEEEEEECCC--C--CCHHHHHHHHHHC-CEEE
Confidence 5566777788888888888765 2 445442 24446666642 1 3444 45555555 9999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.|..+... +-+.||+|++. +.||+.++++-+.++++
T Consensus 340 ~~g~~f~~~-----------------------------------~~~~~Ris~~~--~~~~i~~~l~~l~~~l~ 376 (376)
T 2dou_A 340 APGRGFGPG-----------------------------------GKGFVRIALVR--PLEELLEAAKRIREALD 376 (376)
T ss_dssp EEGGGGCGG-----------------------------------GTTEEEEECCS--CHHHHHHHHHHHHHTC-
T ss_pred cCchhhCCC-----------------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHhC
Confidence 988654210 01389999985 78999999999988764
No 330
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=63.29 E-value=23 Score=37.52 Aligned_cols=92 Identities=21% Similarity=0.231 Sum_probs=63.5
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~VqkLAdr~~IsL 780 (872)
+..+..+.+.+.++|...|.++. +++++|. .|..+.+.+- ++. .++++|++++||.+
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~----~~~~~~~~~~------~~~~~l~~~l~~~~gi~v 352 (389)
T 1o4s_A 295 NSYMVQTFKERKNFVVERLKKMG------------VKFVEPE----GAFYLFFKVR------GDDVKFCERLLEEKKVAL 352 (389)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT------------CCCCCCS----BSSEEEEECS------SCHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC------------CeeecCC----cceEEEEeCC------CCHHHHHHHHHHHCCEEE
Confidence 67788888889999999998862 2344442 2334444552 234 45566667899999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.|..+.. -+.||+|++ ++.||+.++++-+.++++
T Consensus 353 ~~g~~f~~-------------------------------------~~~~Ris~~--~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 353 VPGSAFLK-------------------------------------PGFVRLSFA--TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp EEGGGGTC-------------------------------------TTEEEEECC--SCHHHHHHHHHHHHHHHT
T ss_pred eCchhcCC-------------------------------------CCeEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 88754310 027999998 489999999999988764
No 331
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=62.89 E-value=21 Score=38.15 Aligned_cols=96 Identities=13% Similarity=0.062 Sum_probs=65.5
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~VqkLAdr~~IsL 780 (872)
+..+..+.+.+.++|...|.++. ++++.|. -|-.+.+.+-+ + ++. .++++|++++||.+
T Consensus 305 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~----~g~~~~~~~~~--~--~~~~~l~~~l~~~~gi~v 364 (404)
T 2o1b_A 305 LEEQSNVFKTRRDRFEAMLAKAD------------LPFVHAK----GGIYVWLETPP--G--YDSEQFEQFLVQEKSILV 364 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT------------CCEECCC----BSSEEEEECCT--T--CCHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC------------CeecCCC----cceEEEEeCCC--C--CCHHHHHHHHHHHCCEEE
Confidence 56677788888899998888762 3455542 23346666642 2 333 45677777889999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.|..+... +-+.||+|++. +.||+.++++-+.+++.
T Consensus 365 ~~g~~f~~~-----------------------------------~~~~iRis~~~--~~e~l~~~l~~l~~~l~ 401 (404)
T 2o1b_A 365 APGKPFGEN-----------------------------------GNRYVRISLAL--DDQKLDEAAIRLTELAY 401 (404)
T ss_dssp EESGGGCGG-----------------------------------GTTEEEEECCS--CTTHHHHHHHHHHGGGG
T ss_pred eCchhhCcC-----------------------------------CCCeEEEEEcC--CHHHHHHHHHHHHHHHH
Confidence 988654210 01389999996 78999999999888764
No 332
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=62.78 E-value=43 Score=36.12 Aligned_cols=112 Identities=14% Similarity=0.114 Sum_probs=66.5
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEecc----CCCCcc-ChHHHHHHHHHcC
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRD----KERGLI-NPEVVQKLAEKEG 777 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d----~~G~~v-~p~~VqkLAdr~~ 777 (872)
.....|.+.+.++|.+.|.++.. .+++| .+|..+-+.+.. .+..-+ .-.++++|..++|
T Consensus 312 ~~~~~~~~~~~~~l~~~L~~~g~------------~~~~p----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 375 (456)
T 2ez2_A 312 YEYIEHRVKQVRYLGDKLKAAGV------------PIVEP----VGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETG 375 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC------------CBCSS----CCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC------------ccccC----CCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcC
Confidence 45566778888999989887532 23344 346667666632 122222 2223555557889
Q ss_pred CeE-eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEecccc-CCHHHHHHHHHHHHHhcCc
Q 002866 778 ISL-GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFL-TNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 778 IsL-r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~l-SnFEDVyrl~~Fva~Fld~ 855 (872)
|.+ .+|..+... ...+ |. ....+.+.||+|+++. ++.||+.++++-+.+++..
T Consensus 376 v~~~~~g~~~~~~-~~~~--------------------g~----~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~ 430 (456)
T 2ez2_A 376 VRSMERGIISAGR-NNVT--------------------GE----HHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQH 430 (456)
T ss_dssp EECEEESHHHHCB-CTTT--------------------CS----BCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred eeeeccccccccc-Cccc--------------------cc----cccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 985 446444211 0000 00 0001134799999997 8999999999999987653
No 333
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=60.71 E-value=37 Score=36.35 Aligned_cols=94 Identities=16% Similarity=0.237 Sum_probs=63.9
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChH-HHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPE-VVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~-~VqkLAdr~~IsL 780 (872)
+..+..+.+...++|...|.+...+ .| ++++.|. -|-.+.+.+-+ ++.. ++++|.+++||.+
T Consensus 333 ~~~~~~~~~~~~~~l~~~L~~~~~~-----~g---~~~~~~~----~g~~~~~~~~~-----~~~~~~~~~l~~~~gi~v 395 (430)
T 2x5f_A 333 IEQNIQTLKERYEVTKEVVYADQYH-----SH---WQAYDFN----SGYFMAIKVHD-----VDPEALRKHLIDKYSIGV 395 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCGGGT-----TT---EEECCCC----BSSEEEEEESS-----SCHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC-----CC---ceeeCCC----ceEEEEeCCCC-----CCHHHHHHHHHHhCCEEE
Confidence 3557788888888999888754211 01 5666652 23347777752 3444 5566666699998
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.| . -+.+|+|+++ ++.||+.++++-+.++++
T Consensus 396 ~~g--~---------------------------------------~~~iRis~~~-~~~e~i~~~~~~l~~~l~ 427 (430)
T 2x5f_A 396 IAL--N---------------------------------------ATDIRIAFSC-VEKDDIPHVFDSIAKAID 427 (430)
T ss_dssp EEC--S---------------------------------------SSEEEEEGGG-SCGGGHHHHHHHHHHHHH
T ss_pred ecC--C---------------------------------------CCeEEEEEec-CCHHHHHHHHHHHHHHHH
Confidence 876 0 1279999997 599999999999988653
No 334
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=59.98 E-value=35 Score=37.01 Aligned_cols=103 Identities=11% Similarity=0.117 Sum_probs=66.6
Q ss_pred hhhHHHHHHHHHHHHHHHhcc--cCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCC--CccCh---HHHHHHHHH
Q 002866 703 NKTTCRLRFLINWLVTSLLQL--RFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKER--GLINP---EVVQKLAEK 775 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~L--rHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G--~~v~p---~~VqkLAdr 775 (872)
..+-.|++.+..+|...|.++ +||. ...+ ..+|..+.|.+.+... +.+++ ..+.+.+-+
T Consensus 341 ~~~~~~~~~~~~~l~~~L~~~~~~~~~------~~~~--------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ 406 (452)
T 3n5m_A 341 ENLIERSAQMGSLLLEQLKEEIGEHPL------VGDI--------RGKGLLVGIELVNDKETKEPIDNDKIASVVNACKE 406 (452)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTCTT------EEEE--------EESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCC------eEEE--------EEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHH
Confidence 456678888888888888887 4431 1112 2467778887754221 12222 234555556
Q ss_pred cCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 776 EGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 776 ~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+||.++.+....+ . .-++||+++++..|.||++++++-+.+++.
T Consensus 407 ~Gv~~~~~~~~~~---------------------------~--------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 407 KGLIIGRNGMTTA---------------------------G--------YNNILTLAPPLVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp TTEECEECTTSST---------------------------T--------CCCEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CCcEEeecCcccC---------------------------C--------CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 7888776532210 0 023899999999999999999999998764
No 335
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=59.76 E-value=21 Score=37.56 Aligned_cols=97 Identities=9% Similarity=0.001 Sum_probs=63.8
Q ss_pred chhhHHHHHHHHHHHHHHHhc-ccCCCCCCCCCceEEEEeCCCCCccccceEE-EEeccCCCCccChH-HHHHHHHHcCC
Q 002866 702 LNKTTCRLRFLINWLVTSLLQ-LRFSDSDGESRAHLVHIYGPKIKYERGAAVA-FNVRDKERGLINPE-VVQKLAEKEGI 778 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~-LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VA-FNv~d~~G~~v~p~-~VqkLAdr~~I 778 (872)
+..+..+.+.+.++|...|.+ +.. ++++.| +|+.+. +++-+. | ++.. ++++|++++||
T Consensus 292 ~~~~~~~~~~~~~~l~~~L~~~~~~-----------~~~~~~-----~~~~~~~~~~~~~-~--~~~~~~~~~l~~~~gi 352 (399)
T 1c7n_A 292 LDGCIKVIDKNQRIVKDFFEVNHPE-----------IKAPLI-----EGTYLQWIDFRAL-K--MDHKAMEEFMIHKAQI 352 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTT-----------SBCCCC-----SBSSEEEEECGGG-C--CCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC-----------CeEecC-----CceEEEEEEcccC-C--CCHHHHHHHHHHhCCE
Confidence 566777888888999988887 532 344443 355543 566532 1 3444 55666678999
Q ss_pred eEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 779 SLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 779 sLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.++.|..+... +-+.||+|++.. .|++.++++-+.+++.
T Consensus 353 ~v~~g~~~~~~-----------------------------------~~~~iRis~~~~--~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 353 FFDEGYIFGDG-----------------------------------GIGFERINLAAP--SSVIQESLERLNKALK 391 (399)
T ss_dssp CCEEGGGGCGG-----------------------------------GTTEEEEECCSC--HHHHHHHHHHHHHHHH
T ss_pred EEeCccccCCC-----------------------------------CCCeEEEEeccC--HHHHHHHHHHHHHHHH
Confidence 99988654210 023899999975 6889888888777653
No 336
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=59.58 E-value=24 Score=36.26 Aligned_cols=26 Identities=8% Similarity=-0.000 Sum_probs=24.0
Q ss_pred EEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 828 VVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 828 vVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.||.|+++..+.||+.++++.+.+++
T Consensus 318 ~iRl~~~~~~~~e~i~~~~~~l~~~l 343 (347)
T 1jg8_A 318 EIRLVTHKDVSRNDIEEALNIFEKLF 343 (347)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 69999999999999999999998875
No 337
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=58.93 E-value=37 Score=35.30 Aligned_cols=92 Identities=11% Similarity=0.028 Sum_probs=61.8
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+.+.+.++|...|..+.. ...|..+.+.+-+ ...++++|.+++||.++
T Consensus 282 ~~~~~~~~~~~~~~l~~~l~~~~~--------------------~~~~~~~~~~~~~------~~~~~~~l~~~~gi~v~ 335 (376)
T 3ezs_A 282 AEFFRNIYANNLKLARKIFKNTLI--------------------YPYSFYVYLPVQN------GENFAKTLYQNEGIITL 335 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCCC--------------------CSBSSEEEEECSC------HHHHHHHHHHHHCCBCE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCC--------------------CCcceEEEEECCC------HHHHHHHHHHhCCEEEe
Confidence 566777888888888877761111 1345555555531 24556667666999999
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.|..+... . . +-+.||+|++. +.||+.++++-+.++++
T Consensus 336 ~g~~~~~~----~---------------------~--------~~~~iRis~~~--~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 336 PALYLGRN----R---------------------I--------GADYVRLALVY--DTPLLEKPLEIIETYRE 373 (376)
T ss_dssp EGGGGCST----T---------------------T--------TTTEEEEECCS--CHHHHHHHHHHHHHHHC
T ss_pred CcHHhCCC----C---------------------C--------CCCeEEEEEcC--CHHHHHHHHHHHHHHHH
Confidence 98766320 0 0 02389999984 99999999999998765
No 338
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=58.48 E-value=20 Score=40.10 Aligned_cols=100 Identities=13% Similarity=0.028 Sum_probs=64.0
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEE-eccCCCC-------ccCh--HHHHHH
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFN-VRDKERG-------LINP--EVVQKL 772 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFN-v~d~~G~-------~v~p--~~VqkL 772 (872)
..+..|++...++|++.|.++.. +.++.| +|+.+.|= +..+.+. -+.+ ..+.++
T Consensus 383 ~~~~~~l~~~~~~l~~~L~~~~g-----------~~~~~~-----~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~l 446 (500)
T 3tcm_A 383 DGILASLARRAKALEHAFNKLEG-----------ITCNEA-----EGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRL 446 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTT-----------EECCCC-----CBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC-----------cEEecC-----CeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHH
Confidence 45667778888888989988732 566654 46665552 2211100 0122 236788
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
+++.||.+..|..+... . +...+|+|++ .+.||+.++++-+.+|
T Consensus 447 l~~~gI~v~pg~~f~~~------------------------~----------g~~~iRis~~--~~~e~i~~~i~~l~~~ 490 (500)
T 3tcm_A 447 LESTGIVVVPGSGFGQV------------------------P----------GTWHFRCTIL--PQEDKIPAVISRFTVF 490 (500)
T ss_dssp HHHHCEECEESTTTCCC------------------------T----------TCCBEEEESC--SCTTTHHHHHHHHHHH
T ss_pred HHHCCEEEEeCcccCCC------------------------C----------CCCEEEEEEC--CCHHHHHHHHHHHHHH
Confidence 99999999988655310 0 1237999999 8889998888877776
Q ss_pred cC
Q 002866 853 LN 854 (872)
Q Consensus 853 ld 854 (872)
+.
T Consensus 491 ~~ 492 (500)
T 3tcm_A 491 HE 492 (500)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 339
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=57.76 E-value=35 Score=37.37 Aligned_cols=102 Identities=10% Similarity=0.139 Sum_probs=64.5
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChH-HHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPE-VVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~-~VqkLAdr~~IsL 780 (872)
+..+..+.+...++|...|.++- |. | ++++.| ..|..+.+.+-+ | ++.. ++++|.+ +||.+
T Consensus 342 ~~~~~~~~~~~~~~l~~~L~~~~-~~-----g---~~~~~p----~~g~~~~v~~~~--~--~~~~~l~~~l~~-~gV~v 403 (448)
T 3aow_A 342 IPEIRKFYKPRRDAMLEALEEFM-PE-----G---VKWTKP----EGGMFIWVTLPD--G--IDSKKMLERAIK-KGVAY 403 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-CT-----T---CEECCC----SBSSEEEEECST--T--CCHHHHHHHHHH-TTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CC-----C---eEEeCC----CccEEEEEEcCC--C--CCHHHHHHHHHH-CCcEE
Confidence 44556666677788888887631 10 1 455555 346677777743 2 3444 4555555 49999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcCc
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld~ 855 (872)
+.|..+.+. . . +-+.+|+|++.. +.||+.++++-+.+++..
T Consensus 404 ~pg~~f~~~----~---------------------~--------~~~~iRls~~~~-~~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 404 VPGEAFYAH----R---------------------D--------VKNTMRLNFTYV-DEDKIMEGIKRLAETIKE 444 (448)
T ss_dssp EEGGGGSTT----C---------------------C--------CCSEEEEECSSS-CTHHHHHHHHHHHHHHHH
T ss_pred EcchhhcCC----C---------------------C--------CCCEEEEEeCCC-CHHHHHHHHHHHHHHHHH
Confidence 988654320 0 0 023899999985 899999999988887643
No 340
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=57.70 E-value=34 Score=38.24 Aligned_cols=100 Identities=18% Similarity=0.108 Sum_probs=65.5
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEE-EeccCCC-------CccChHH--HHHH
Q 002866 703 NKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAF-NVRDKER-------GLINPEV--VQKL 772 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAF-Nv~d~~G-------~~v~p~~--VqkL 772 (872)
..+..+++...++|++.|.++.. |+++.| +|+.+.| .+..+.+ .-+++.. +.++
T Consensus 382 ~~~~~~l~~~~~~l~~~L~~~~g-----------~~~~~p-----~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~l 445 (498)
T 3ihj_A 382 ESVLGNLAKKAKLTEDLFNQVPG-----------IHCNPL-----QGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKL 445 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTT-----------EECCCC-----CBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC-----------cEecCC-----CeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHH
Confidence 44567777778888888887632 566654 5666666 4422111 1134454 6899
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
+.+.||.+..|..+... . +...+|+|++ .+.||+.++++-+.+|
T Consensus 446 l~~~gI~v~pG~~f~~~----~------------------------------~~~~~Ris~~--~~~e~l~~~i~~L~~~ 489 (498)
T 3ihj_A 446 LEETGICVVPGSGFGQR----E------------------------------GTYHFRMTIL--PPVEKLKTVLQKVKDF 489 (498)
T ss_dssp HHHHCBCCEEGGGTCCC----T------------------------------TCCBEEEECC--SCHHHHHHHHHHHHHH
T ss_pred HHHCCEEEEeCcccCCC----C------------------------------CCCEEEEEeC--CCHHHHHHHHHHHHHH
Confidence 99999999998665320 0 0237899995 7899988888777776
Q ss_pred cC
Q 002866 853 LN 854 (872)
Q Consensus 853 ld 854 (872)
+.
T Consensus 490 ~~ 491 (498)
T 3ihj_A 490 HI 491 (498)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 341
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=57.18 E-value=25 Score=37.16 Aligned_cols=93 Identities=17% Similarity=0.101 Sum_probs=57.2
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChH-HHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPE-VVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~-~VqkLAdr~~IsL 780 (872)
+..+..+.+...++|...|.++ . +++++|.. |-.+-.++.. .| ++.. ++++|+ ++||.+
T Consensus 289 ~~~~~~~~~~~~~~l~~~L~~~-g-----------~~~~~~~~----~~~~~~~~~~-~~--~~~~~l~~~l~-~~gv~v 348 (385)
T 1b5p_A 289 VEMAREAYRRRRDLLLEGLTAL-G-----------LKAVRPSG----AFYVLMDTSP-IA--PDEVRAAERLL-EAGVAV 348 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-T-----------CCBCCCSB----TTEEEEECTT-TC--SSHHHHHHHHH-HTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-C-----------CeecCCCe----eEEEEEecCC-CC--CCHHHHHHHHH-HCCeEE
Confidence 4556677777778888888765 2 33444421 2223233321 12 3444 455555 889999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
+.|..+.. -+.||+|++ ++.|++.+.++-+.+++
T Consensus 349 ~~g~~f~~-------------------------------------~~~iRis~~--~~~~~i~~~l~~l~~~l 382 (385)
T 1b5p_A 349 VPGTDFAA-------------------------------------FGHVRLSYA--TSEENLRKALERFARVL 382 (385)
T ss_dssp EESGGGTC-------------------------------------TTEEEEECC--SCHHHHHHHHHHGGGGC
T ss_pred ecccccCC-------------------------------------CCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence 98855410 027999988 78898888887777655
No 342
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=56.54 E-value=19 Score=37.76 Aligned_cols=98 Identities=11% Similarity=0.104 Sum_probs=64.4
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHHHHHHHcCCe
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQKLAEKEGIS 779 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~VqkLAdr~~Is 779 (872)
++..+..+.+.+.++|...|.++. +++++|. .|..+.+.+-+ .| ++. .++++|++++||.
T Consensus 286 ~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~----~~~~~~~~~~~-~~--~~~~~~~~~l~~~~gi~ 346 (389)
T 1gd9_A 286 AVEEMRKEYDRRRKLVWKRLNEMG------------LPTVKPK----GAFYIFPRIRD-TG--LTSKKFSELMLKEARVA 346 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT------------CCCCCCC----BTTEECCBCGG-GT--CCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC------------CeecCCC----eeeEEEEeccC-CC--CCHHHHHHHHHHhCCEE
Confidence 466777888889999999998762 2334432 23344445532 11 334 4556666689999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
++.|..+... + -+.||+|++. +.||+.++++-+.++++
T Consensus 347 v~~g~~~~~~-------------------------~----------~~~iRi~~~~--~~~~i~~~l~~l~~~~~ 384 (389)
T 1gd9_A 347 VVPGSAFGKA-------------------------G----------EGYVRISYAT--AYEKLEEAMDRMERVLK 384 (389)
T ss_dssp CEEGGGGCGG-------------------------G----------TTBEEEECCS--CHHHHHHHHHHHHHHHH
T ss_pred EeCchhhCCC-------------------------C----------CCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 9988654210 0 1378999985 89999999998887653
No 343
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=56.46 E-value=30 Score=36.35 Aligned_cols=96 Identities=14% Similarity=0.129 Sum_probs=62.7
Q ss_pred chhhHHHHHHHHHHHHHHHhc-ccCCCCCCCCCceEEEEeCCCCCccccceE-EEEeccCCCCccChH-HHHHHHHHcCC
Q 002866 702 LNKTTCRLRFLINWLVTSLLQ-LRFSDSDGESRAHLVHIYGPKIKYERGAAV-AFNVRDKERGLINPE-VVQKLAEKEGI 778 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~-LrHp~~~~~ng~~LV~IYGp~~~~~RG~~V-AFNv~d~~G~~v~p~-~VqkLAdr~~I 778 (872)
+..+..+.+.+.++|.+.|.+ ++. +++++| +|+.+ .+++-+. | ++.. ++++|++++||
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~~~~-----------~~~~~~-----~~~~~~~~~~~~~-~--~~~~~l~~~l~~~~gi 348 (390)
T 1d2f_A 288 LDALRIYLKDNLTYIADKMNAAFPE-----------LNWQIP-----QSTYLAWLDLRPL-N--IDDNALQKALIEQEKV 348 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSS-----------CCCCCC-----SBCSEEEEECGGG-C--CCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC-----------CEEecC-----CccEEEEEEcccc-C--CCHHHHHHHHHHHcCE
Confidence 566778888888999988887 432 344554 34444 4666432 1 3344 45556668999
Q ss_pred eEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 779 SLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 779 sLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.++.|..+... .-+.+|+|++. +.||+.+.++-+.+.+
T Consensus 349 ~v~~g~~f~~~-----------------------------------~~~~~Ris~~~--~~~~l~~~l~~l~~~l 386 (390)
T 1d2f_A 349 AIMPGYTYGEE-----------------------------------GRGFVRLNAGC--PRSKLEKGVAGLINAI 386 (390)
T ss_dssp ECEEGGGGCGG-----------------------------------GTTEEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred EeeCccccCCC-----------------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 99988655210 02389999997 4788888887777654
No 344
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=56.02 E-value=32 Score=37.03 Aligned_cols=99 Identities=12% Similarity=0.029 Sum_probs=65.0
Q ss_pred hhhHHHHHHHHHHHHHHHhccc--CCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCcc----ChHHHHHHHHHc
Q 002866 703 NKTTCRLRFLINWLVTSLLQLR--FSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLI----NPEVVQKLAEKE 776 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~Lr--Hp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v----~p~~VqkLAdr~ 776 (872)
..+-.|++.+..++...|.++. || .+..+ ..+|..+.|.+.+...... ....+.+.+-++
T Consensus 319 ~~~~~~~~~~~~~~~~~l~~~~~~~~---------~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 384 (439)
T 3dxv_A 319 DDLPAMAERKGRLLRDGLSELAKRHP---------LIGDI-----RGRGLACGMELVCDRQSREPARAETAKLIYRAYQL 384 (439)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCT---------TEEEE-----EEETTEEEEEEEEETTTTEECHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCC---------CeEEE-----EEEEEEEEEEEecCccccCCCHHHHHHHHHHHHHC
Confidence 4566788888888888888773 43 12221 2468888898865322211 122333334445
Q ss_pred CCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 777 GISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 777 ~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
||.++.|.. . -..+|+++.+..|.||+.++++-+.+++.
T Consensus 385 Gv~v~~~~~--------~-------------------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 423 (439)
T 3dxv_A 385 GLVVYYVGM--------N-------------------------------GNVLEFTPPLTITETDIHKALDLLDRAFS 423 (439)
T ss_dssp TEECEEEST--------T-------------------------------SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CcEEeecCC--------C-------------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 887766510 0 13899999999999999999999998764
No 345
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=55.36 E-value=48 Score=34.52 Aligned_cols=95 Identities=15% Similarity=0.078 Sum_probs=59.9
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccC-hHHHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLIN-PEVVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~-p~~VqkLAdr~~IsL 780 (872)
+.....+.+....+|...|.++.. +.++.|. .|..+-+.+.. .++ ..++++++.++||.+
T Consensus 274 ~~~~~~~~~~~~~~l~~~l~~~~~-----------~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~ll~~~gi~v 334 (375)
T 3op7_A 274 LERNRHILEENLAILDQWIEEEPL-----------VSYIRPA----VVSTSFVKIAV----DMPMEDFCLQLLQEHGVLL 334 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTT-----------EEECCCS----SSSCEEEEECC----SSCHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCC-----------ceEecCC----CeEEEeEEcCC----CCCHHHHHHHHHHhCCEEE
Confidence 455666667777777777776422 5555442 22233333321 123 455677778999999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.|..+.. .+.+|++++... ||+.++++-+.+++.
T Consensus 335 ~~g~~~~~-------------------------------------~~~iRi~~~~~~--~~i~~~l~~l~~~l~ 369 (375)
T 3op7_A 335 VPGNRFER-------------------------------------DGYVRLGFACEQ--ETLIKGLEKLSQFLR 369 (375)
T ss_dssp EEGGGGTC-------------------------------------TTEEEECCCSCH--HHHHHHHHHHHHHHG
T ss_pred eChhhhCC-------------------------------------CCeEEEEecCCH--HHHHHHHHHHHHHHH
Confidence 88754420 127899988644 999999999988775
No 346
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=54.73 E-value=31 Score=36.37 Aligned_cols=106 Identities=9% Similarity=0.086 Sum_probs=71.2
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
++..+..|.+.+.++|...|.++. ++++.+ ...+..+.+.+.+ .-++...+.+++.++||.+
T Consensus 286 ~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gi~v 347 (420)
T 3gbx_A 286 EFKVYQQQVAKNAKAMVEVFLNRG------------YKVVSG---GTENHLFLLDLVD---KNLTGKEADAALGRANITV 347 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT------------CEEGGG---SCSSSEEEEECGG---GTCCHHHHHHHHHHTTEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcC------------CeeccC---CCCCeEEEEEcCC---CCCCHHHHHHHHHHCCcEe
Confidence 456778888889999999988742 345543 2356677777653 1256778888888999998
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCC----HHHHHHHHHHHHHhcCc
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTN----FEDVYKLWAFVAKFLNP 855 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSn----FEDVyrl~~Fva~Fld~ 855 (872)
+.+.... .. + .+ + +...||+++..+++ .+|+.++.+.+.+.++.
T Consensus 348 ~~~~~~~-----~~----~----------------~~-----~-~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 348 NKNSVPN-----DP----K----------------SP-----F-VTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp EEECCTT-----CS----S----------------CT-----T-TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred ccccCCC-----Cc----c----------------cc-----C-CCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 8742110 00 0 00 0 01249999999876 79999999999987643
No 347
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=53.23 E-value=81 Score=34.42 Aligned_cols=27 Identities=7% Similarity=-0.058 Sum_probs=24.9
Q ss_pred EEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 828 VVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 828 vVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+||++..+..|.||++++++-+.+++.
T Consensus 428 ~iRi~~~~~~t~e~i~~~l~~l~~~l~ 454 (460)
T 3gju_A 428 ILGFAPPLCLTREQADIVVSKTADAVK 454 (460)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999988764
No 348
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=51.22 E-value=20 Score=37.56 Aligned_cols=116 Identities=11% Similarity=0.088 Sum_probs=64.6
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..|.+.+..++...|.++... +..... ........|.+.-. +...+.+.+.++||.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~L~~~~~~------------~~~~~~-~~~~~~~~~~~~~~-----~~~~l~~~L~~~GI~~~ 306 (367)
T 3nyt_A 245 FEEEIALRQKVAAEYDLSLKQVGIG------------TPFIEV-NNISVYAQYTVRMD-----NRESVQASLKAAGVPTA 306 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC------------CCCCCT-TEECCCSSEEEECS-----SHHHHHHHHHHHTCCCB
T ss_pred HHHHHHHHHHHHHHHHHHhccCCee------------ccCCCC-CCceeeEEEEEEeC-----CHHHHHHHHHHCCCcee
Confidence 4567788888999999999887321 110000 00111112233221 45667777777899999
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
.++.+.+.....+....+. .+.. ...--.+||.+++...|.|||+++++-|.++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~---------~~~~--------~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 307 VHYPIPLNKQPAVADEKAK---------LPVG--------DKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp CSCSSCGGGSGGGCCTTCC---------CHHH--------HHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred ccCCCccccChhhhccCCC---------ChHH--------HHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 9864221110011000000 0000 0111349999999999999999999999874
No 349
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=51.19 E-value=83 Score=34.86 Aligned_cols=104 Identities=9% Similarity=0.061 Sum_probs=65.6
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhccc-CCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccC------
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLR-FSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLIN------ 765 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~Lr-Hp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~------ 765 (872)
.|+.++. +.+..+++.+..+|...|..|. || .|..+ .-+|..+.|.+.+.....-.
T Consensus 342 aL~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~---------~v~~v-----~~~G~~~~i~~~~~~~~~~~~~~~~~ 404 (476)
T 3i5t_A 342 NIELMER---EGIVDQAREMADYFAAALASLRDLP---------GVAET-----RSVGLVGCVQCLLDPTRADGTAEDKA 404 (476)
T ss_dssp HHHHHHH---TTHHHHHHHHHHHHHHHHHTTTTST---------TEEEE-----EEETTEEEEEECCC-----CCHHHHH
T ss_pred HHHHHHh---HHHHHHHHHHHHHHHHHHHHHhcCC---------CeEEE-----EecCceeEEEEecCccccccccchhH
Confidence 3554433 4577888889999999998875 42 12221 24678888888764322211
Q ss_pred -hHHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHH
Q 002866 766 -PEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYK 844 (872)
Q Consensus 766 -p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyr 844 (872)
...+.+.+-++||-++.. + ++||++..+..|.||+++
T Consensus 405 ~~~~~~~~l~~~Gv~v~~~-----------------------------------------g-~~iRi~p~l~~t~e~i~~ 442 (476)
T 3i5t_A 405 FTLKIDERCFELGLIVRPL-----------------------------------------G-DLCVISPPLIISRAQIDE 442 (476)
T ss_dssp HHHHHHHHHHHTTEECEEE-----------------------------------------T-TEEEECCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEec-----------------------------------------C-CEEEEECCCCCCHHHHHH
Confidence 122333333446555430 0 289999999999999999
Q ss_pred HHHHHHHhcCc
Q 002866 845 LWAFVAKFLNP 855 (872)
Q Consensus 845 l~~Fva~Fld~ 855 (872)
+++-+.+++..
T Consensus 443 ~l~~l~~~l~~ 453 (476)
T 3i5t_A 443 MVAIMRQAITE 453 (476)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987753
No 350
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=50.19 E-value=50 Score=35.42 Aligned_cols=24 Identities=17% Similarity=0.084 Sum_probs=19.8
Q ss_pred eeEEEEeccccCCHHHHHHHHHHH
Q 002866 826 VEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 826 ~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
-+.||.|+|.-++-++|..|.+.+
T Consensus 368 ~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 368 DDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp TTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CCeEEEEeccCCHHHHHHHHHHHh
Confidence 458999999988888888887654
No 351
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=50.17 E-value=52 Score=35.21 Aligned_cols=107 Identities=17% Similarity=0.215 Sum_probs=68.0
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcc--cCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCC--CC---cc
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQL--RFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKE--RG---LI 764 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~L--rHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~--G~---~v 764 (872)
..|++++.- .+..|++.+.++|...|.+| ++| .+..+ ..+|..+.|.+.+.. +. ..
T Consensus 316 aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~---------~~~~~-----~~~g~~~~i~~~~~~~~~~~~~~~ 378 (433)
T 1zod_A 316 RVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFD---------CIGDV-----RGRGLLLGVEIVKDRRTKEPADGL 378 (433)
T ss_dssp HHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCT---------TEEEE-----EEETTEEEEEEEEETTTTEECTTH
T ss_pred HHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCC---------CeEEE-----EEEEEEEEEEEecCccccCCChHH
Confidence 456655442 35678888889999999887 343 12221 135888888876411 10 11
Q ss_pred ChHHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHH
Q 002866 765 NPEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYK 844 (872)
Q Consensus 765 ~p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyr 844 (872)
...++++|. ++||.++.|... + .-..||+|+.+..+.||+.+
T Consensus 379 ~~~~~~~l~-~~Gv~v~~~~~~------------~-------------------------~~~~lRi~~~~~~t~~~i~~ 420 (433)
T 1zod_A 379 GAKITRECM-NLGLSMNIVQLP------------G-------------------------MGGVFRIAPPLTVSEDEIDL 420 (433)
T ss_dssp HHHHHHHHH-HTTEECCEECCT------------T-------------------------SCCEEEECCCTTCCHHHHHH
T ss_pred HHHHHHHHH-HCCCeEeccCCC------------C-------------------------CCCEEEEECCcCCCHHHHHH
Confidence 223444444 678877665210 0 01389999999999999999
Q ss_pred HHHHHHHhc
Q 002866 845 LWAFVAKFL 853 (872)
Q Consensus 845 l~~Fva~Fl 853 (872)
+++-+.+.+
T Consensus 421 ~l~~l~~~l 429 (433)
T 1zod_A 421 GLSLLGQAI 429 (433)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988765
No 352
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=50.08 E-value=51 Score=35.08 Aligned_cols=99 Identities=8% Similarity=-0.038 Sum_probs=62.6
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEE-eCCCCCccccceEEEEeccCCCCccCh-HHHHHHHHH---
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHI-YGPKIKYERGAAVAFNVRDKERGLINP-EVVQKLAEK--- 775 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~I-YGp~~~~~RG~~VAFNv~d~~G~~v~p-~~VqkLAdr--- 775 (872)
++..+..+.+.+.++|...|.++. +.+ +.|. .|..+.+++-+ ++. .++++|+++
T Consensus 295 ~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~~~----~~~~~~~~~~~-----~~~~~l~~~l~~~~~~ 353 (409)
T 2gb3_A 295 FFDFVRETYRERVETVLKKLEEHG------------LKRFTKPS----GAFYITAELPV-----EDAEEFARWMLTDFNM 353 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT------------CCCBCCCS----BSSEEEEECSS-----SCHHHHHHHHHHSCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC------------ceeeeCCC----eeEEEEEEeCC-----CCHHHHHHHHHhcccc
Confidence 356677788888888888888762 233 3332 23333335531 334 455666666
Q ss_pred --cCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 776 --EGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 776 --~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
.||.++.|..+... . +. +-+.||+|++ ++.||+.++++-+.+++
T Consensus 354 ~~~gi~v~~g~~f~~~----~--------------------~~--------~~~~iRis~~--~~~e~i~~~~~~l~~~l 399 (409)
T 2gb3_A 354 DGETTMVAPLRGFYLT----P--------------------GL--------GKKEIRIACV--LEKDLLSRAIDVLMEGL 399 (409)
T ss_dssp TTEEEECEEGGGGCSS----T--------------------TT--------TSSEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred ccCcEEEeCchHhCCC----C--------------------CC--------CCCEEEEEeC--CCHHHHHHHHHHHHHHH
Confidence 59999887544210 0 00 0248999999 89999999999988866
Q ss_pred C
Q 002866 854 N 854 (872)
Q Consensus 854 d 854 (872)
.
T Consensus 400 ~ 400 (409)
T 2gb3_A 400 K 400 (409)
T ss_dssp H
T ss_pred H
Confidence 3
No 353
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=49.24 E-value=82 Score=33.78 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=65.3
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccCh-HHHHHHHHHcCCeE
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINP-EVVQKLAEKEGISL 780 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p-~~VqkLAdr~~IsL 780 (872)
+..+..+.+...++|+..|.++- | | ++.++.| ..|..+.+.+-+. ++. ..+.+++.++||.+
T Consensus 319 ~~~~~~~~~~~~~~l~~~L~~~~-~------~--~~~~~~p----~~g~~~~~~~~~~----~~~~~~~~~~l~~~gv~v 381 (425)
T 2r2n_A 319 VDRVIDFYSNQKDAILAAADKWL-T------G--LAEWHVP----AAGMFLWIKVKGI----NDVKELIEEKAVKMGVLM 381 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-S------S--SEEECCC----SBSSEEEEEETTC----SCCHHHHHTHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-C------C--CeEEeCC----CceEEEEEEeCCC----CCHHHHHHHHHHHCCcEE
Confidence 34455666667777777777631 1 1 1344555 3466677777431 233 44577777899999
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.|..+... . . . +-+.||+|++. .+.||+.++++-+.+++.
T Consensus 382 ~pg~~f~~~----~------------------~--~--------~~~~iRis~~~-~~~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 382 LPGNAFYVD----S------------------S--A--------PSPYLRASFSS-ASPEQMDVAFQVLAQLIK 422 (425)
T ss_dssp EEGGGGSSS----T------------------T--S--------CCCEEEEECSS-CCHHHHHHHHHHHHHHHH
T ss_pred echhhhcCC----C------------------C--C--------CCCEEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 988655310 0 0 0 02489999995 499999999999988664
No 354
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=46.40 E-value=47 Score=35.90 Aligned_cols=105 Identities=10% Similarity=0.035 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEecc----CCCCcc-ChHHHHHHHHHcCCeEeec
Q 002866 709 LRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRD----KERGLI-NPEVVQKLAEKEGISLGIG 783 (872)
Q Consensus 709 ~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d----~~G~~v-~p~~VqkLAdr~~IsLr~G 783 (872)
.+.+.++|.+.|.++.+ .++ | .+|..+.|.+.+ .+..-+ ...++++|..++||.++.|
T Consensus 330 ~~~~~~~l~~~L~~~~~------------~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~ 392 (467)
T 2oqx_A 330 RIAQVQYLVDGLEEIGV------------VCQ-Q----AGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEI 392 (467)
T ss_dssp HHHHHHHHHHHHHHTTC------------CEE-E----ECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEE
T ss_pred HHHHHHHHHHHHHHCCC------------eee-c----CCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceeccc
Confidence 34556777777777632 233 3 357778888742 122222 2233566658899999874
Q ss_pred ccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEecccc-CCHHHHHHHHHHHHHhcC
Q 002866 784 FLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFL-TNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 784 ~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~l-SnFEDVyrl~~Fva~Fld 854 (872)
..|... ..+. .|. +.. ..-++||.|+++. +|.|||.++++-+.+++.
T Consensus 393 ~~~~~~--~~~~--~g~----------~~~----------~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~ 440 (467)
T 2oqx_A 393 GSFLLG--RDPK--TGK----------QLP----------CPAELLRLTIPRATYTQTHMDFIIEAFKHVKE 440 (467)
T ss_dssp SHHHHC--BCTT--TCS----------BCC----------CSCCEEEECCCTTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccc--cccc--ccc----------ccc----------CccCeEEEEecCCCCCHHHHHHHHHHHHHHHh
Confidence 322110 0000 000 000 0125899999999 999999999999998764
No 355
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=46.03 E-value=1e+02 Score=34.00 Aligned_cols=92 Identities=16% Similarity=0.115 Sum_probs=63.9
Q ss_pred hhhHHHHHHHHHHHHHHHhccc-CCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 703 NKTTCRLRFLINWLVTSLLQLR-FSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~Lr-Hp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
..+..|++.+..+|...|.+|. +| +...| ..+|.++.|.+.+. ++...+.+.+-++||-++
T Consensus 359 ~~~~~~~~~~~~~l~~~L~~l~~~~------~v~~v--------r~~G~~~~i~l~~~----~~~~~~~~~l~~~Gv~v~ 420 (457)
T 3tfu_A 359 QDWRTRITELAAGLTAGLDTARALP------AVTDV--------RVCGAIGVIECDRP----VDLAVATPAALDRGVWLR 420 (457)
T ss_dssp SCHHHHHHHHHHHHHHHHGGGGGST------TEEEE--------EECSSCEEEEESSC----CCHHHHHHHHHHTTEECC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCC------Ceeee--------ecCCeEEEEEECCc----ccHHHHHHHHHHCCeEEE
Confidence 4577888889999999999885 43 12122 23588899988652 234444444444577655
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
.. . .++|++..+..|.||++++++-+.+++.
T Consensus 421 ~~--------------------------------~----------~~lRi~p~~~~t~eei~~~l~~L~~~l~ 451 (457)
T 3tfu_A 421 PF--------------------------------R----------NLVYAMPPYICTPAEITQITSAMVEVAR 451 (457)
T ss_dssp CB--------------------------------T----------TEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ec--------------------------------C----------CEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 20 0 1789999999999999999999998764
No 356
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=45.86 E-value=47 Score=35.66 Aligned_cols=94 Identities=12% Similarity=0.066 Sum_probs=62.8
Q ss_pred chhhhhhhhcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHH
Q 002866 692 RHLDHINMLGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQK 771 (872)
Q Consensus 692 ~gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~Vqk 771 (872)
..|++++. +..|++.+.++|...|.++ - ..++ .+|.++.|.+.. ++. . ..++++
T Consensus 322 aal~~~~~-----~~~~~~~~~~~l~~~L~~~-~---------~~~~--------~~g~~~~i~~~~-~~~-~-~~~~~~ 375 (419)
T 2eo5_A 322 KVIDIVKD-----LLPHVNEIGKIFAEELQGL-A---------DDVR--------GIGLAWGLEYNE-KKV-R-DRIIGE 375 (419)
T ss_dssp HHHHHHHH-----HHHHHHHHHHHHHHHHTTS-S---------SEEE--------EETTEEEEECSC-HHH-H-HHHHHH
T ss_pred HHHHHHHH-----HHHHHHHHHHHHHHHHHHh-h---------hheE--------eeeEEEEEEEec-Ccc-H-HHHHHH
Confidence 34555443 6788888999999999876 1 0121 356777776631 111 1 234444
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
|. ++||.++.|. -++||+|+++..+.||++++++-+.+
T Consensus 376 l~-~~Gv~v~~~~-----------------------------------------~~~lRis~~~~~t~e~i~~~l~~l~~ 413 (419)
T 2eo5_A 376 SF-KRGLLLLPAG-----------------------------------------RSAIRVIPPLVISEEEAKQGLDILKK 413 (419)
T ss_dssp HH-HTTEECEEET-----------------------------------------TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HH-HCCCEEecCC-----------------------------------------CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 44 6788776531 02799999999999999999999988
Q ss_pred hc
Q 002866 852 FL 853 (872)
Q Consensus 852 Fl 853 (872)
++
T Consensus 414 ~l 415 (419)
T 2eo5_A 414 VI 415 (419)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 357
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=45.03 E-value=76 Score=33.85 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=24.2
Q ss_pred cccceEEEEeccCCCCccChHHHHHHHHHcCCeEee
Q 002866 747 ERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLGI 782 (872)
Q Consensus 747 ~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr~ 782 (872)
.+|++++|.+.+ +..+.+++++.+|-++.
T Consensus 302 g~g~~~~~~l~~-------~~~~~~~l~~~~i~~~~ 330 (389)
T 3acz_A 302 GYGSTFLFEMKS-------FEAAKKLMEHLKVCTLA 330 (389)
T ss_dssp SCCSEEEEEESS-------HHHHHHHHTTCSSSEEB
T ss_pred CCCeEEEEEECC-------HHHHHHHHHhCCCcEEC
Confidence 469999999853 67889999999998877
No 358
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=44.91 E-value=88 Score=34.09 Aligned_cols=27 Identities=11% Similarity=0.198 Sum_probs=24.7
Q ss_pred EEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 828 VVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 828 vVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+||+++.+..+.||++++++-+.+++.
T Consensus 421 ~iRi~~~~~~t~e~i~~~l~~l~~~l~ 447 (459)
T 4a6r_A 421 HIVSAPPLVMTRAEVDEMLAVAERCLE 447 (459)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999988764
No 359
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=41.77 E-value=1e+02 Score=34.15 Aligned_cols=96 Identities=9% Similarity=0.055 Sum_probs=61.0
Q ss_pred hhhHHHHH-HHHHHHHHHHhccc-CCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCC--CccC------hHHHHHH
Q 002866 703 NKTTCRLR-FLINWLVTSLLQLR-FSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKER--GLIN------PEVVQKL 772 (872)
Q Consensus 703 ~~I~~R~r-~L~~wLv~~L~~Lr-Hp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G--~~v~------p~~VqkL 772 (872)
..+..+++ .+..+|...|..|. || .|..+ .-+|..+.|.+.+... +.+. ...+.+.
T Consensus 345 ~~~~~~~~~~~~~~l~~~L~~l~~~~---------~v~~v-----r~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (472)
T 3hmu_A 345 ENILDHVRNVAAPYLKEKWEALTDHP---------LVGEA-----KIVGMMASIALTPNKASRAKFASEPGTIGYICRER 410 (472)
T ss_dssp TTHHHHHHHTHHHHHHHHHHGGGGST---------TEEEE-----EEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCC---------CeEEE-----EecCceEEEEEecCccccccccchhHHHHHHHHHH
Confidence 45666777 77888888887774 32 12211 2468888888865321 1121 1223333
Q ss_pred HHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 773 AEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 773 Adr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
+-++||-++.+. .+||++..+..|.||++++++-+.++
T Consensus 411 l~~~Gv~v~~~g------------------------------------------~~iRi~p~~~~t~e~i~~~l~~l~~~ 448 (472)
T 3hmu_A 411 CFANNLIMRHVG------------------------------------------DRMIISPPLVITPAEIDEMFVRIRKS 448 (472)
T ss_dssp HHHTTBCCEEET------------------------------------------TEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHCCcEEEecC------------------------------------------CEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 334566554320 28999999999999999999999887
Q ss_pred cC
Q 002866 853 LN 854 (872)
Q Consensus 853 ld 854 (872)
+.
T Consensus 449 l~ 450 (472)
T 3hmu_A 449 LD 450 (472)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 360
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=40.31 E-value=66 Score=33.83 Aligned_cols=106 Identities=10% Similarity=0.031 Sum_probs=68.5
Q ss_pred hcchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCe
Q 002866 700 LGLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGIS 779 (872)
Q Consensus 700 lGl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~Is 779 (872)
-++..+..|.+.+.++|...|.++. ++++.+ ...+..+.+.+.+ .-++...+.+++.++||.
T Consensus 278 ~~~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gi~ 339 (417)
T 3n0l_A 278 DEWKVYAKQVRTNAQVLANVLMDRK------------FKLVSD---GTDNHLVLMSFLD---REFSGKDADLALGNAGIT 339 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT------------CEEGGG---SCSSSEEEEECTT---SSSCHHHHHHHHHHTTEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCC------------ceeccC---CCCceEEEEEccc---CCCCHHHHHHHHHHcCeE
Confidence 3566778888888899999998732 344432 1234455555432 235778889999999999
Q ss_pred EeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCC----HHHHHHHHHHHHHhcC
Q 002866 780 LGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTN----FEDVYKLWAFVAKFLN 854 (872)
Q Consensus 780 Lr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSn----FEDVyrl~~Fva~Fld 854 (872)
++.+..-. . ... . .....+|+++..+++ .+|+.++++.+.+.+.
T Consensus 340 v~~~~~~~--~-~~~-----~-----------------------~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~ 387 (417)
T 3n0l_A 340 ANKNTVPG--E-IRS-----P-----------------------FITSGLRLGTPALTARGFKEKEMEIVSNYIADILD 387 (417)
T ss_dssp CEECCCTT--C-CSC-----T-----------------------TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred EeccccCC--C-Ccc-----c-----------------------CCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 98754211 0 000 0 002368888887754 7999999999998664
No 361
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=39.67 E-value=1.3e+02 Score=32.48 Aligned_cols=103 Identities=11% Similarity=0.002 Sum_probs=63.4
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhccc-CCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCc--cC----
Q 002866 693 HLDHINMLGLNKTTCRLRFLINWLVTSLLQLR-FSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGL--IN---- 765 (872)
Q Consensus 693 gLdh~d~lGl~~I~~R~r~L~~wLv~~L~~Lr-Hp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~--v~---- 765 (872)
.|++++. ..+-.+++.+..++...|.+|. || .+... ..+|..+.|.+.+..... +.
T Consensus 331 al~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~---------~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~ 393 (448)
T 3dod_A 331 NLALFES---ENIVEQVAEKSKKLHFLLQDLHALP---------HVGDI-----RQLGFMCGAELVRSKETKEPYPADRR 393 (448)
T ss_dssp HHHHHHH---TTHHHHHHHHHHHHHHHHHHHTTST---------TEEEE-----EEETTEEEEEECSBTTTTBCCCGGGC
T ss_pred HHHHHhc---ccHHHHHHHHHHHHHHHHHHHhcCC---------CeEEE-----EeeeEEEEEEEccCcccccccchhhH
Confidence 4554433 3456677777778777777753 32 12111 236788888886532221 11
Q ss_pred -hHHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHH
Q 002866 766 -PEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYK 844 (872)
Q Consensus 766 -p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyr 844 (872)
...+.+.+-++||.++.| + ..||.++.+..|.||+++
T Consensus 394 ~~~~~~~~l~~~Gv~~~~~-----------------------------------------~-~~iRi~~~~~~t~e~i~~ 431 (448)
T 3dod_A 394 IGYKVSLKMRELGMLTRPL-----------------------------------------G-DVIAFLPPLASTAEELSE 431 (448)
T ss_dssp HHHHHHHHHHHTTEECCEE-----------------------------------------T-TEEEECCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHCCcEEecc-----------------------------------------C-CEEEEECCCCCCHHHHHH
Confidence 123333344457766433 0 279999999999999999
Q ss_pred HHHHHHHhcC
Q 002866 845 LWAFVAKFLN 854 (872)
Q Consensus 845 l~~Fva~Fld 854 (872)
+++-+.+++.
T Consensus 432 ~l~~l~~~l~ 441 (448)
T 3dod_A 432 MVAIMKQAIH 441 (448)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 362
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=37.68 E-value=55 Score=33.67 Aligned_cols=84 Identities=14% Similarity=0.094 Sum_probs=55.7
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+.+.+.++|...|.++. ++++. ..|..+.|.+-+ ++...+.+.+.++||.++
T Consensus 251 ~~~~~~~~~~~~~~l~~~L~~~g------------~~~~~-----~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~ 308 (335)
T 1uu1_A 251 FEERTKFIVEERERMKSALREMG------------YRITD-----SRGNFVFVFMEK-----EEKERLLEHLRTKNVAVR 308 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT------------CCBCC-----CCSSEEEEECCT-----HHHHHHHHHHHHHTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC------------cEEcC-----CCCeEEEEECCC-----CCHHHHHHHHHHCCEEEE
Confidence 56677888888889998888762 23332 246777776633 334444444446798887
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
.+ -+.||+|+| +.+|++++++-+.++
T Consensus 309 ~~------------------------------------------~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 309 SF------------------------------------------REGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp EE------------------------------------------TTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred EC------------------------------------------CCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 60 127899986 468999999888764
No 363
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=37.37 E-value=1.2e+02 Score=33.55 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=19.7
Q ss_pred eeEEEEeccccCCHHHHHHHHHHHHHhc
Q 002866 826 VEVVTASLGFLTNFEDVYKLWAFVAKFL 853 (872)
Q Consensus 826 ~gvVrASLG~lSnFEDVyrl~~Fva~Fl 853 (872)
-+.||.|+|+ ||+..|++-+.+-|
T Consensus 406 ~~liRlsvG~----E~~~dl~~dl~~al 429 (430)
T 3ri6_A 406 PAMMRLSVGI----EEIEDLKEDILQAL 429 (430)
T ss_dssp TTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred CCeEEEEecc----CCHHHHHHHHHHhh
Confidence 4589999995 89999998887744
No 364
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=36.94 E-value=25 Score=37.79 Aligned_cols=120 Identities=11% Similarity=-0.014 Sum_probs=65.8
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
|..+..|.+.+..++...|.++..- ..++ .|.... .....-|.+.-.++ .....+.+.+.++||.++
T Consensus 250 l~~~~~~~~~~~~~~~~~L~~~~~~------~~~~----~~~~~~-~~~~~~~~~~~~~~--~~~~~l~~~L~~~gI~~~ 316 (377)
T 3ju7_A 250 WDDKLKERTRISEWYKQLLQSNGLM------KKGW----QLQKTE-AVIQQFMPILCPEE--VRNKQVIEDLKKQKIEAR 316 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTT------TTTC----BCCCCS-CBCCSSEEEECCTT--SCHHHHHHHHHTTTBCCB
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCc------cccc----cCCCCC-cceEEEEEEEeCCh--hhHHHHHHHHHHCCCcee
Confidence 4566778888999999888886420 0000 011000 00100112222122 346677777777899999
Q ss_pred ecc--ccc--ccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 782 IGF--LSH--IRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 782 ~G~--l~~--i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+++ .|| +.+.+. . .. ..+.. ...--.+||.+++...|.|||+++.+-|.+++.
T Consensus 317 ~~~~~~~~~~~~~~~~-------~-~~----~~p~~--------~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~ 373 (377)
T 3ju7_A 317 LYFSPSCHQQVLFRNY-------K-ST----DLTRT--------NKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVV 373 (377)
T ss_dssp CTTSSCGGGSGGGTTS-------C-BS----CCHHH--------HHHHHHEEEECCCTTCCHHHHHHHHHHHTC---
T ss_pred cccCCccccchhhhcC-------C-CC----CCHHH--------HHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHh
Confidence 997 455 222111 0 00 00000 011134999999999999999999999987654
No 365
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=35.36 E-value=1.6e+02 Score=32.16 Aligned_cols=99 Identities=13% Similarity=-0.017 Sum_probs=63.7
Q ss_pred hhhHHHHHHHHHHHHHHHhcc--cCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCC---CccChHHHHHHHHHcC
Q 002866 703 NKTTCRLRFLINWLVTSLLQL--RFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKER---GLINPEVVQKLAEKEG 777 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~L--rHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G---~~v~p~~VqkLAdr~~ 777 (872)
..+-.|++.+..+|...|.++ +||. ...+ ..+|..+.|.+.+... .......+.+.+-++|
T Consensus 346 ~~~~~~~~~~~~~l~~~L~~~~~~~~~------~~~~--------~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 411 (451)
T 3oks_A 346 EGLVARAQQIEKIMKDRLGRLQAEDDR------IGDV--------RGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAG 411 (451)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCTT------EEEE--------EEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCC------eEEE--------EEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCC
Confidence 356677788888888888877 3431 1112 2468889998876111 0111233444555677
Q ss_pred CeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 778 ISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 778 IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
|.++.+.. + -.++|+++.+..+.||++++++-+.+++.
T Consensus 412 v~v~~~~~---------------~------------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 412 VIVLSCGT---------------Y------------------------GNVVRFLPPLSIGDDLLNEGLDVLEEVLR 449 (451)
T ss_dssp EECEEECT---------------T------------------------SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred cEEecCCC---------------C------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 77665310 0 12789999999999999999999988653
No 366
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=35.07 E-value=1.5e+02 Score=32.29 Aligned_cols=99 Identities=12% Similarity=-0.001 Sum_probs=62.9
Q ss_pred hhhHHHHHHHHHHHHHHHhcc--cCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCc---cChHHHHHHHHHcC
Q 002866 703 NKTTCRLRFLINWLVTSLLQL--RFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGL---INPEVVQKLAEKEG 777 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~L--rHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~---v~p~~VqkLAdr~~ 777 (872)
..+-.|++.+..+|...|.++ +||. ...+ .-+|..+.|.+.+..... .....+.+.+-++|
T Consensus 344 ~~~~~~~~~~~~~l~~~l~~~~~~~~~------~~~~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 409 (453)
T 4ffc_A 344 LDLPARARAIEASVTSRLSALAEEVDI------IGEV--------RGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQG 409 (453)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCSS------EEEE--------EEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCC------eEEE--------EeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCC
Confidence 356677777888888888777 3431 1112 245788999887611110 11233444445567
Q ss_pred CeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 778 ISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 778 IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
|.++.|.. . -.++|+++.+..+.||+.++++-+.+++.
T Consensus 410 v~v~~~~~---------------~------------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 447 (453)
T 4ffc_A 410 VLILTCGT---------------F------------------------GNVIRLLPPLVIGDDLLDEGITALSDIIR 447 (453)
T ss_dssp EECCEECT---------------T------------------------SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CEEecCCC---------------C------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 76655310 0 12899999999999999999999988764
No 367
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=34.02 E-value=1.9e+02 Score=31.02 Aligned_cols=24 Identities=29% Similarity=0.324 Sum_probs=21.0
Q ss_pred eEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 827 EVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 827 gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+.||+|+|. ||+.+|++-+.+.++
T Consensus 370 ~~iRis~g~----e~~~~li~~l~~al~ 393 (404)
T 1e5e_A 370 GMIRLSVGI----EDADELIADFKQGLD 393 (404)
T ss_dssp TEEEEECCS----SCHHHHHHHHHHHHH
T ss_pred CeEEEEeCC----CCHHHHHHHHHHHHH
Confidence 589999999 999999999988654
No 368
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=32.68 E-value=25 Score=37.42 Aligned_cols=88 Identities=17% Similarity=0.189 Sum_probs=60.1
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
++..+..+.+.+.++|...|.++..+ .+ ++++.| +|+.+.| .+ ++...++++++++||.+
T Consensus 322 ~~~~~~~~~~~~~~~l~~~L~~~~~~-----~~---~~~~~~-----~~~~~~~--~~-----~~~~~~~~~l~~~gi~v 381 (412)
T 1yaa_A 322 DMVTMSSRITKMRHALRDHLVKLGTP-----GN---WDHIVN-----QCGMFSF--TG-----LTPQMVKRLEETHAVYL 381 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCS-----SC---CTHHHH-----CCSSEEE--CC-----CCHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCC-----CC---eeeecc-----CceEEEe--eC-----CCHHHHHHHHHhCCEEe
Confidence 57788888999999999999886421 01 233333 3455444 23 34567788888888876
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~Fld 854 (872)
+. .+|+|++.+ |.||+.++++.+.+.++
T Consensus 382 ~~---------------------------------------------~~Ris~~~~-~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 382 VA---------------------------------------------SGRASIAGL-NQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp CT---------------------------------------------TSEEEGGGC-CTTTHHHHHHHHHHHHH
T ss_pred cc---------------------------------------------CcEEEEccC-CHhHHHHHHHHHHHHHH
Confidence 52 137788854 88999999999988653
No 369
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=29.67 E-value=34 Score=35.96 Aligned_cols=85 Identities=19% Similarity=0.118 Sum_probs=56.7
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
++..+..|.+...++|...|.++..+. + ++++.| +|+.+.| .+ ++...+.+++.++||.+
T Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~~~-----~---~~~~~~-----~~g~~~~--~~-----~~~~~~~~~l~~~gi~v 366 (394)
T 2ay1_A 307 ELEAVRSGMLRLREQLAGELRDLSGSD-----R---FGFVAE-----HRGMFSR--LG-----ATPEQVKRIKEEFGIYM 366 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSS-----T---TTHHHH-----CCSSEEE--CC-----CCHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCC-----C---eeEEcC-----CceEEEe--eC-----CCHHHHHHHHHhCCEEe
Confidence 467788888889999999998875210 1 222332 3344433 22 34567888888888876
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
+.| +|+|++ ..+.||+.++++.+.+
T Consensus 367 ~~~---------------------------------------------~Ris~~-~~~~~~i~~~~~~l~~ 391 (394)
T 2ay1_A 367 VGD---------------------------------------------SRINIA-GLNDNTIPILARAIIE 391 (394)
T ss_dssp CTT---------------------------------------------CEEEGG-GCCTTTHHHHHHHHHH
T ss_pred cCC---------------------------------------------CeEEee-cCCHhhHHHHHHHHHH
Confidence 531 377778 4688999999988876
No 370
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=28.71 E-value=1.1e+02 Score=33.17 Aligned_cols=110 Identities=12% Similarity=0.087 Sum_probs=65.4
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
++.....+++...++|...|.++.-. ..| ++++.+ ...+..+.+++.+ .-+....+++++++.||.+
T Consensus 299 ~~~~~~~~~~~~~~~l~~~L~~~~~~----~~g---~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~l~~~GI~v 365 (447)
T 3h7f_A 299 EFADRQRRTLSGARIIADRLMAPDVA----KAG---VSVVSG---GTDVHLVLVDLRD---SPLDGQAAEDLLHEVGITV 365 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSHHHH----HTT---CEEGGG---SCSSSEEEEECTT---SSCCHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc----CCC---eEEecC---CCCCCEEEEEcCC---CCCCHHHHHHHHHHCCeEE
Confidence 45667778888888888888776100 001 233321 1234455566543 2357788999999999988
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccC----CHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLT----NFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lS----nFEDVyrl~~Fva~Fld 854 (872)
+... +.+...+ ......+|++...++ +.||++++++.+.+.++
T Consensus 366 ~~~~---i~~~~~~----------------------------p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~ 412 (447)
T 3h7f_A 366 NRNA---VPNDPRP----------------------------PMVTSGLRIGTPALATRGFGDTEFTEVADIIATALA 412 (447)
T ss_dssp BC--------------------------------------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred eccc---CCCCCCC----------------------------CCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 7321 1110000 000236999888885 47999999999988654
No 371
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=28.17 E-value=1.2e+02 Score=32.75 Aligned_cols=104 Identities=8% Similarity=-0.085 Sum_probs=65.5
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCC---CC--------ccC-hHHH
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKE---RG--------LIN-PEVV 769 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~---G~--------~v~-p~~V 769 (872)
+..+..+.+.+.++|+..|.++.. +++.| ..|..+.+++-+.. +. ..+ ..++
T Consensus 329 ~~~~~~~~~~~~~~l~~~L~~~g~------------~~~~~----~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 392 (447)
T 3b46_A 329 FEKMRQEYINKFKIFTSIFDELGL------------PYTAP----EGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRIS 392 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC------------CEECC----SBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC------------eecCC----CeeEEEEEecccccCccccccccccccCCCHHHHH
Confidence 566778888889999999988632 34444 23556666664310 00 112 3566
Q ss_pred HHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHH
Q 002866 770 QKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFV 849 (872)
Q Consensus 770 qkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fv 849 (872)
++|++++||.+..|..+... .. . ..+-+.||+|++. +.||+.+.++-+
T Consensus 393 ~~l~~~~gV~v~pg~~f~~~----~~--------------------~------~~~~~~iRls~~~--~~e~l~~~~~~l 440 (447)
T 3b46_A 393 HWLINELGVVAIPPTEFYIK----EH--------------------E------KAAENLLRFAVCK--DDAYLENAVERL 440 (447)
T ss_dssp HHHHHHTCEECBCGGGGSCG----GG--------------------G------GGGTTEEEEECCS--CHHHHHHHHHHG
T ss_pred HHHHHhCCEEEECchHhCCC----Cc--------------------c------CCCCCEEEEEEeC--CHHHHHHHHHHH
Confidence 77888899999887433110 00 0 0002489999984 799999999888
Q ss_pred HHhc
Q 002866 850 AKFL 853 (872)
Q Consensus 850 a~Fl 853 (872)
.+|.
T Consensus 441 ~~~~ 444 (447)
T 3b46_A 441 KLLK 444 (447)
T ss_dssp GGGG
T ss_pred HHHH
Confidence 8764
No 372
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=27.92 E-value=57 Score=34.15 Aligned_cols=85 Identities=14% Similarity=0.100 Sum_probs=55.2
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+++...++|++.|.++..+ .| ++++.| +|+.+.| .+ ++...+.+++.++||.++
T Consensus 312 ~~~~~~~~~~~~~~l~~~L~~~~~~-----~~---~~~~~~-----~~~~~~~--~~-----~~~~~~~~~l~~~gi~v~ 371 (397)
T 3fsl_A 312 VEEMRTRILAMRQELVKVLSTEMPE-----RN---FDYLLN-----QRGMFSY--TG-----LSAAQVDRLREEFGVYLI 371 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTT-----SC---CTHHHH-----CCSSEEE--CC-----CCHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC-----CC---ceeecC-----CceEEEe--cC-----CCHHHHHHHHHhCCEEEC
Confidence 5667788888888999999887521 01 223333 2333333 33 456778888888888765
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
.|. |+|++.+++ |||.++++-+.+.
T Consensus 372 ~g~---------------------------------------------Ris~~~~~~-~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 372 ASG---------------------------------------------RMCVAGLNT-ANVQRVAKAFAAV 396 (397)
T ss_dssp TTC---------------------------------------------EEEGGGCCT-TTHHHHHHHHHHH
T ss_pred CCC---------------------------------------------eEEEEecCH-hhHHHHHHHHHhh
Confidence 320 677776655 7799998887763
No 373
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=24.76 E-value=77 Score=33.35 Aligned_cols=85 Identities=16% Similarity=0.099 Sum_probs=57.3
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..|.+.+.++|+..|.++..+. + ++++.| +|+.+.| .+ ++...++++++++||.+.
T Consensus 315 ~~~~~~~~~~~r~~l~~~L~~~~~~~-----~---~~~~~~-----~~~~~~~--~~-----~~~~~~~~ll~~~gi~v~ 374 (401)
T 7aat_A 315 VKGMADRIISMRTQLVSNLKKEGSSH-----N---WQHITD-----QIGMFCF--TG-----LKPEQVERLTKEFSIYMT 374 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCS-----C---CHHHHH-----CCSSEEE--CC-----CCHHHHHHHHHHHCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCC-----C---CceecC-----CcceEEe--cC-----CCHHHHHHHHHhCCEecc
Confidence 45567788888889999998874211 1 233333 3444444 34 568888999998888762
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
. .+|+|++.+|+.+ |+++++-+.+.
T Consensus 375 ~---------------------------------------------~~Ris~~~~~~~~-i~~~~~~l~~~ 399 (401)
T 7aat_A 375 K---------------------------------------------DGRISVAGVASSN-VGYLAHAIHQV 399 (401)
T ss_dssp T---------------------------------------------TCEEEGGGCCTTT-HHHHHHHHHHH
T ss_pred C---------------------------------------------CCeEEeccCChhh-HHHHHHHHHHH
Confidence 0 2588888776655 99999988764
No 374
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=24.72 E-value=43 Score=35.06 Aligned_cols=85 Identities=13% Similarity=0.152 Sum_probs=54.8
Q ss_pred chhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeEe
Q 002866 702 LNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISLG 781 (872)
Q Consensus 702 l~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsLr 781 (872)
+..+..+.+...++|.+.|.++..|. + ++++.| +|+.+.|- + ++...+.+++.++||.++
T Consensus 311 ~~~~~~~~~~~~~~l~~~L~~~~~~~-----~---~~~~~~-----~~~~~~~~--~-----~~~~~~~~~l~~~gv~v~ 370 (396)
T 2q7w_A 311 LTDMRQRIQRMRQLFVNTLQEKGANR-----D---FSFIIK-----QNGMFSFS--G-----LTKEQVLRLREEFGVYAV 370 (396)
T ss_dssp HHHC-CHHHHHHHHHHHHHHHTTCCS-----C---CTHHHH-----CCSSEEEC--C-----CCHHHHHHHHHHHCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCC-----C---cceecC-----CCceEEEe--c-----CCHHHHHHHHHhcCeeec
Confidence 45567778888888888888875310 1 233332 34444442 2 335678888888887765
Q ss_pred ecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHHh
Q 002866 782 IGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAKF 852 (872)
Q Consensus 782 ~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~F 852 (872)
.| +|+|++.+ +.||+.++++-+.+.
T Consensus 371 ~~---------------------------------------------~Ris~~~~-~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 371 AS---------------------------------------------GRVNVAGM-TPDNMAPLCEAIVAV 395 (396)
T ss_dssp TT---------------------------------------------CEEEGGGC-CTTTHHHHHHHHHHH
T ss_pred CC---------------------------------------------ceEEEeec-CHHHHHHHHHHHHhc
Confidence 21 37888865 889999999888764
No 375
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=21.90 E-value=77 Score=33.96 Aligned_cols=95 Identities=14% Similarity=-0.039 Sum_probs=56.7
Q ss_pred hhhHHHHHHHHHHHHHHHhccc--CCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCC---------ccChHHHHH
Q 002866 703 NKTTCRLRFLINWLVTSLLQLR--FSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERG---------LINPEVVQK 771 (872)
Q Consensus 703 ~~I~~R~r~L~~wLv~~L~~Lr--Hp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~---------~v~p~~Vqk 771 (872)
..+-.|++.+..+|.+.|.++. |+. ...+ ..+|..+.|.+.+..-. ......+.+
T Consensus 323 ~~~~~~~~~~~~~l~~~L~~~~~~~~~------~~~~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (434)
T 3l44_A 323 EGLYEKLDELGATLEKGILEQAAKHNI------DITL--------NRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFK 388 (434)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTC------CEEE--------EEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCC------CEEE--------EeeccEEEEEEecCcccchhhccccCHHHHHHHHH
Confidence 4566778888888888888763 321 0111 24688899988652210 001133444
Q ss_pred HHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Q 002866 772 LAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKLWAFVAK 851 (872)
Q Consensus 772 LAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl~~Fva~ 851 (872)
.+.++||-++.|..+ .+|.+ +..|.||++++++-+.+
T Consensus 389 ~l~~~Gv~v~~~~~~-----------------------------------------~~rl~--~~~t~e~i~~~l~~l~~ 425 (434)
T 3l44_A 389 LMLQEGVNLAPSKYE-----------------------------------------AWFLT--TEHTKEDIEYTIEAVGR 425 (434)
T ss_dssp HHHHTTEECCSSTTC-----------------------------------------CEECC--TTCCHHHHHHHHHHHHH
T ss_pred HHHHCCeEEeecCCC-----------------------------------------cEEEe--cccCHHHHHHHHHHHHH
Confidence 445567766543111 23443 57789999999999988
Q ss_pred hcC
Q 002866 852 FLN 854 (872)
Q Consensus 852 Fld 854 (872)
++.
T Consensus 426 ~l~ 428 (434)
T 3l44_A 426 AFA 428 (434)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 376
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=21.55 E-value=3.8e+02 Score=28.65 Aligned_cols=28 Identities=4% Similarity=-0.046 Sum_probs=24.3
Q ss_pred eEEEEecccc-CCHHHHHHHHHHHHHhcC
Q 002866 827 EVVTASLGFL-TNFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 827 gvVrASLG~l-SnFEDVyrl~~Fva~Fld 854 (872)
++||.|++.+ +|.||++++++-|.+++.
T Consensus 411 ~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 439 (467)
T 1ax4_A 411 EFMRLTIARRVYTNDHMDYIADALIGLKE 439 (467)
T ss_dssp CEEEEECCTTSSCHHHHHHHHHHHHTTHH
T ss_pred ceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 5999999954 999999999999988664
No 377
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=20.93 E-value=1.3e+02 Score=33.89 Aligned_cols=52 Identities=27% Similarity=0.188 Sum_probs=39.8
Q ss_pred hHHHHHHHHHcCCeEeecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccCCHHHHHHH
Q 002866 766 PEVVQKLAEKEGISLGIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLTNFEDVYKL 845 (872)
Q Consensus 766 p~~VqkLAdr~~IsLr~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lSnFEDVyrl 845 (872)
...+.+++++.||.+..|..|... -+.||+|++.+ |.||+.++
T Consensus 472 ~~~~~~ll~~~GV~v~pg~~f~~~------------------------------------~~~iRls~a~~-~~e~i~~~ 514 (533)
T 3f6t_A 472 VDFLLKLAEKNGVVLVDGVGFGAK------------------------------------PGELRVSQANL-PTEDYALI 514 (533)
T ss_dssp HHHHHHHHHHTTSSSCTTEEECSS------------------------------------TTEEEEESSSS-CHHHHHHH
T ss_pred HHHHHHHHHhCCEEEeCCcccCCC------------------------------------CCEEEEEEeeC-CHHHHHHH
Confidence 366788999999999988666310 13899999775 58899999
Q ss_pred HHHHHHhcC
Q 002866 846 WAFVAKFLN 854 (872)
Q Consensus 846 ~~Fva~Fld 854 (872)
++-+.++++
T Consensus 515 i~~L~~~l~ 523 (533)
T 3f6t_A 515 GKQVLELLK 523 (533)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988887654
No 378
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=20.69 E-value=4e+02 Score=30.05 Aligned_cols=104 Identities=13% Similarity=0.084 Sum_probs=68.6
Q ss_pred cchhhHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEEEeCCCCCccccceEEEEeccCCCCccChHHHHHHHHHcCCeE
Q 002866 701 GLNKTTCRLRFLINWLVTSLLQLRFSDSDGESRAHLVHIYGPKIKYERGAAVAFNVRDKERGLINPEVVQKLAEKEGISL 780 (872)
Q Consensus 701 Gl~~I~~R~r~L~~wLv~~L~~LrHp~~~~~ng~~LV~IYGp~~~~~RG~~VAFNv~d~~G~~v~p~~VqkLAdr~~IsL 780 (872)
++.....|+....++|...|.++. +++..+ .....+|.+++.+ .| ++...+++++++.||.+
T Consensus 332 ~~~~~~~~~~~na~~L~~~L~~~G------------~~v~~~---~t~t~lv~vdl~~-~g--~~~~~~~~~L~~~GI~v 393 (490)
T 2a7v_A 332 MFREYSLQVLKNARAMADALLERG------------YSLVSG---GTDNHLVLVDLRP-KG--LDGARAERVLELVSITA 393 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT------------CEEGGG---SCSSSEEEEECTT-TT--CCHHHHHHHHHHTTEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcC------------cEEecC---CCCCeEEEEEeCC-CC--CCHHHHHHHHHhCCeEE
Confidence 345566788888999999998753 244321 1223567777754 22 56677888888889988
Q ss_pred eecccccccccCCcccCCCCCcCCCCCCCCCCCCCCcCCCCCccceeEEEEeccccC----CHHHHHHHHHHHHHhcC
Q 002866 781 GIGFLSHIRILDSPRQQGGSSSLDDTTLCRPMDNGRHDGKGGFIRVEVVTASLGFLT----NFEDVYKLWAFVAKFLN 854 (872)
Q Consensus 781 r~G~l~~i~~~d~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~gvVrASLG~lS----nFEDVyrl~~Fva~Fld 854 (872)
..+.... |.+ .+..+.+|+++-++| +.+|+.++.+++.+.+.
T Consensus 394 ~~~~~p~----d~~----------------------------p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 394 NKNTCPG----DRS----------------------------AITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EEECCTT----CCC----------------------------SSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ecCccCC----CCC----------------------------CCCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 7653221 100 011347899888887 57999999999988654
Done!