Query 002868
Match_columns 872
No_of_seqs 359 out of 1243
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 04:43:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002868.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002868hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 5.6E-23 1.9E-27 201.1 16.0 150 595-761 4-163 (169)
2 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-21 4.2E-26 181.1 13.9 123 594-756 13-135 (136)
3 1d9s_A Cyclin-dependent kinase 99.9 4.1E-22 1.4E-26 184.3 10.4 124 595-759 12-136 (136)
4 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5.1E-21 1.8E-25 170.7 14.1 124 596-759 3-126 (126)
5 3v30_A DNA-binding protein rfx 99.8 8.8E-21 3E-25 180.5 15.0 127 595-761 36-162 (172)
6 2rfa_A Transient receptor pote 99.8 2.6E-20 9E-25 184.6 17.4 161 595-761 37-224 (232)
7 1ihb_A P18-INK4C(INK6), cyclin 99.8 6.7E-21 2.3E-25 178.8 11.7 123 596-759 39-162 (162)
8 1awc_B Protein (GA binding pro 99.8 1.3E-20 4.4E-25 176.8 13.5 118 596-753 35-152 (153)
9 3v31_A Ankyrin repeat family A 99.8 2E-20 6.9E-25 177.2 14.4 126 596-761 37-162 (167)
10 1oy3_D Transcription factor in 99.8 1.9E-20 6.5E-25 189.2 14.3 163 595-774 45-267 (282)
11 2rfm_A Putative ankyrin repeat 99.8 2.9E-20 9.8E-25 180.4 14.7 122 596-757 69-190 (192)
12 1awc_B Protein (GA binding pro 99.8 3.4E-20 1.2E-24 173.9 14.7 124 595-759 2-125 (153)
13 1bi7_B P16INK4A, MTS1, multipl 99.8 4.2E-21 1.4E-25 181.5 8.1 126 594-760 11-137 (156)
14 2y1l_E Darpin-8.4; hydrolase-i 99.8 3.4E-20 1.2E-24 177.0 14.3 121 596-756 48-168 (169)
15 1oy3_D Transcription factor in 99.8 5.1E-20 1.8E-24 186.0 16.2 151 596-759 10-217 (282)
16 3jxi_A Vanilloid receptor-rela 99.8 1.7E-20 5.7E-25 189.6 12.5 138 594-761 92-252 (260)
17 2y1l_E Darpin-8.4; hydrolase-i 99.8 4E-20 1.4E-24 176.6 14.3 125 595-759 14-138 (169)
18 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.4E-20 4.9E-25 176.5 11.0 125 594-759 4-128 (162)
19 3twr_A Tankyrase-2; ankyrin re 99.8 1.5E-20 5E-25 177.8 10.7 121 596-757 43-163 (165)
20 2rfm_A Putative ankyrin repeat 99.8 2.4E-20 8.1E-25 180.9 12.4 124 596-759 36-159 (192)
21 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2.9E-20 1E-24 173.8 12.4 120 595-756 36-155 (156)
22 3v31_A Ankyrin repeat family A 99.8 3.5E-20 1.2E-24 175.6 13.0 124 596-759 4-127 (167)
23 1s70_B 130 kDa myosin-binding 99.8 4.3E-20 1.5E-24 189.4 14.4 162 595-772 73-272 (299)
24 3twr_A Tankyrase-2; ankyrin re 99.8 4.5E-20 1.6E-24 174.4 13.4 125 596-759 9-133 (165)
25 4g8k_A 2-5A-dependent ribonucl 99.8 7E-20 2.4E-24 192.6 16.2 159 596-761 126-300 (337)
26 3v30_A DNA-binding protein rfx 99.8 4.8E-20 1.6E-24 175.4 13.1 124 597-759 4-127 (172)
27 1yyh_A HN1;, notch 1, ankyrin 99.8 9.4E-20 3.2E-24 184.9 15.9 149 595-760 57-216 (253)
28 3aaa_C Myotrophin, protein V-1 99.8 5.7E-20 1.9E-24 166.8 12.8 116 595-753 7-122 (123)
29 2etb_A Transient receptor pote 99.8 3.8E-20 1.3E-24 186.9 12.8 136 595-760 90-247 (256)
30 2dzn_A Probable 26S proteasome 99.8 1.4E-19 4.7E-24 178.2 16.4 151 595-759 36-200 (228)
31 3f6q_A Integrin-linked protein 99.8 6.2E-20 2.1E-24 176.5 13.3 125 596-759 6-130 (179)
32 3aji_A 26S proteasome non-ATPa 99.8 1.1E-19 3.7E-24 179.7 15.2 148 595-759 40-197 (231)
33 3utm_A Tankyrase-1; tankyrase, 99.8 1.3E-19 4.5E-24 187.8 16.5 148 596-760 92-306 (351)
34 2f8y_A Notch homolog 1, transl 99.8 1.5E-19 5E-24 177.8 16.0 149 595-760 25-184 (223)
35 1bd8_A P19INK4D CDK4/6 inhibit 99.8 6.1E-20 2.1E-24 171.6 12.6 123 594-756 1-123 (156)
36 3hra_A Ankyrin repeat family p 99.8 1E-19 3.4E-24 176.2 14.4 146 596-756 40-200 (201)
37 2etb_A Transient receptor pote 99.8 7.3E-20 2.5E-24 184.8 13.7 152 595-761 43-208 (256)
38 4b93_B Ankyrin repeat domain-c 99.8 4.9E-20 1.7E-24 191.8 12.6 160 596-772 53-225 (269)
39 2pnn_A Transient receptor pote 99.8 4.9E-20 1.7E-24 188.2 12.4 135 595-759 101-258 (273)
40 2rfa_A Transient receptor pote 99.8 1.1E-19 3.8E-24 180.1 14.5 148 596-759 4-183 (232)
41 4hbd_A KN motif and ankyrin re 99.8 1.1E-19 3.9E-24 188.5 15.2 149 595-758 111-274 (276)
42 3f6q_A Integrin-linked protein 99.8 3E-20 1E-24 178.7 10.0 127 595-761 39-165 (179)
43 3c5r_A BARD-1, BRCA1-associate 99.8 6.9E-21 2.4E-25 175.5 5.3 123 595-757 10-132 (137)
44 3t8k_A Uncharacterized protein 99.8 2.1E-20 7.2E-25 185.3 8.5 128 595-761 38-181 (186)
45 1ul4_A SPL4, squamosa promoter 99.8 5.9E-22 2E-26 178.8 -2.4 63 2-65 30-92 (94)
46 3ljn_A Hypothetical protein; a 99.8 1.2E-19 4.1E-24 192.8 13.9 130 595-759 138-269 (364)
47 1dcq_A PYK2-associated protein 99.8 2.2E-19 7.4E-24 188.3 15.5 139 596-770 131-272 (278)
48 3jxi_A Vanilloid receptor-rela 99.8 1.3E-19 4.5E-24 183.0 13.3 153 595-761 46-212 (260)
49 2pnn_A Transient receptor pote 99.8 1.8E-19 6.3E-24 184.0 14.2 150 595-761 54-220 (273)
50 2xai_A ASB-9, ankyrin repeat a 99.8 1.6E-19 5.4E-24 184.3 13.6 160 595-772 36-206 (261)
51 2f8y_A Notch homolog 1, transl 99.8 2.4E-19 8.2E-24 176.3 14.2 150 596-761 59-218 (223)
52 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.5E-19 5.2E-24 156.9 11.3 92 636-758 1-92 (93)
53 3hra_A Ankyrin repeat family p 99.8 2.8E-19 9.5E-24 173.1 14.1 150 596-759 6-170 (201)
54 1ikn_D Protein (I-kappa-B-alph 99.8 8.6E-20 2.9E-24 182.2 10.7 131 596-760 79-210 (236)
55 2dzn_A Probable 26S proteasome 99.8 4.8E-19 1.7E-23 174.3 15.5 147 596-757 3-163 (228)
56 3aji_A 26S proteasome non-ATPa 99.8 2.1E-19 7.2E-24 177.6 12.8 147 596-759 74-230 (231)
57 3deo_A Signal recognition part 99.8 1.3E-19 4.5E-24 175.8 11.1 111 594-745 43-154 (183)
58 2vge_A RELA-associated inhibit 99.8 1E-19 3.6E-24 184.8 10.6 126 596-761 22-150 (229)
59 3b7b_A Euchromatic histone-lys 99.8 5.9E-19 2E-23 175.1 15.5 148 596-759 12-169 (237)
60 3ehr_A Osteoclast-stimulating 99.8 6E-20 2E-24 182.4 8.0 126 596-761 74-200 (222)
61 1yyh_A HN1;, notch 1, ankyrin 99.8 2E-19 6.9E-24 182.4 12.0 146 597-758 92-247 (253)
62 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.2E-19 3.9E-24 183.7 9.5 126 596-761 38-166 (239)
63 4g8k_A 2-5A-dependent ribonucl 99.8 1E-18 3.4E-23 183.8 16.6 150 596-756 26-190 (337)
64 1k1a_A B-cell lymphoma 3-encod 99.8 7.2E-19 2.5E-23 174.0 14.6 147 596-759 47-208 (241)
65 2xai_A ASB-9, ankyrin repeat a 99.8 7.9E-19 2.7E-23 179.2 15.2 145 596-759 4-159 (261)
66 1ikn_D Protein (I-kappa-B-alph 99.8 2.2E-19 7.4E-24 179.3 10.7 131 595-759 45-176 (236)
67 1ul5_A SPL7, squamosa promoter 99.8 3.4E-21 1.2E-25 172.2 -2.7 60 2-62 25-84 (88)
68 3eu9_A Huntingtin-interacting 99.8 1.4E-18 4.7E-23 170.7 15.5 149 596-761 77-237 (240)
69 3ui2_A Signal recognition part 99.8 3.8E-19 1.3E-23 181.5 11.9 124 595-759 45-185 (244)
70 3d9h_A CDNA FLJ77766, highly s 99.8 9.1E-19 3.1E-23 182.0 14.9 147 595-759 92-247 (285)
71 1k1a_A B-cell lymphoma 3-encod 99.8 2.4E-18 8.1E-23 170.3 17.1 152 596-759 10-175 (241)
72 2fo1_E LIN-12 protein; beta-ba 99.8 7E-19 2.4E-23 189.8 13.7 153 595-760 199-372 (373)
73 3b7b_A Euchromatic histone-lys 99.8 1.5E-18 5.1E-23 172.1 14.4 147 596-759 45-202 (237)
74 4b93_B Ankyrin repeat domain-c 99.8 9.7E-20 3.3E-24 189.5 6.0 140 596-754 87-236 (269)
75 3ljn_A Hypothetical protein; a 99.8 3.2E-19 1.1E-23 189.5 10.0 147 596-759 21-198 (364)
76 3d9h_A CDNA FLJ77766, highly s 99.8 2.1E-18 7.3E-23 179.2 15.5 146 596-759 60-215 (285)
77 1ycs_B 53BP2, P53BP2; ankyrin 99.8 3.6E-19 1.2E-23 180.1 9.3 124 596-760 6-129 (239)
78 1wdy_A 2-5A-dependent ribonucl 99.8 2.7E-18 9.1E-23 172.5 15.5 145 596-755 73-240 (285)
79 1wdy_A 2-5A-dependent ribonucl 99.8 2.4E-18 8.1E-23 172.9 14.7 128 595-761 148-280 (285)
80 2b0o_E UPLC1; arfgap, structur 99.8 1.9E-18 6.5E-23 183.3 14.1 130 597-760 153-285 (301)
81 3lvq_E ARF-GAP with SH3 domain 99.8 1.1E-18 3.7E-23 196.5 13.0 131 597-761 134-267 (497)
82 3kea_A K1L; tropism, ANK repea 99.8 9.8E-19 3.3E-23 182.0 11.6 145 595-760 31-187 (285)
83 3utm_A Tankyrase-1; tankyrase, 99.8 2.4E-18 8.3E-23 178.4 13.2 125 596-759 25-149 (351)
84 1n11_A Ankyrin; clathrin, BAND 99.8 2.7E-18 9.3E-23 186.4 14.0 147 596-759 213-369 (437)
85 2fo1_E LIN-12 protein; beta-ba 99.7 3.3E-18 1.1E-22 184.6 12.4 150 595-760 166-339 (373)
86 3kea_A K1L; tropism, ANK repea 99.7 1E-18 3.4E-23 182.0 8.0 146 596-761 63-222 (285)
87 3jue_A Arfgap with coiled-coil 99.7 5.3E-18 1.8E-22 186.3 14.0 123 596-758 200-325 (368)
88 1s70_B 130 kDa myosin-binding 99.7 2.8E-18 9.5E-23 176.0 10.7 121 596-756 41-161 (299)
89 1sw6_A Regulatory protein SWI6 99.7 1.1E-18 3.8E-23 185.4 7.9 133 595-760 131-309 (327)
90 1n11_A Ankyrin; clathrin, BAND 99.7 7.5E-18 2.6E-22 183.0 13.1 147 596-759 15-171 (437)
91 3c5r_A BARD-1, BRCA1-associate 99.7 6E-18 2.1E-22 155.8 10.4 97 632-759 5-101 (137)
92 4hbd_A KN motif and ankyrin re 99.7 5E-18 1.7E-22 176.2 9.2 148 597-759 78-242 (276)
93 4gpm_A Engineered protein OR26 99.7 3E-17 1E-21 160.6 12.8 113 639-760 6-129 (169)
94 1d9s_A Cyclin-dependent kinase 99.7 6.5E-18 2.2E-22 156.1 7.3 100 628-759 3-103 (136)
95 2l6b_A NR1C; ankyrin, consensu 99.7 1.2E-17 4E-22 149.5 8.4 95 634-759 6-100 (115)
96 3eu9_A Huntingtin-interacting 99.7 5.5E-17 1.9E-21 159.3 13.8 146 596-758 10-167 (240)
97 3t8k_A Uncharacterized protein 99.7 6E-18 2.1E-22 167.6 6.5 122 597-759 8-146 (186)
98 3aaa_C Myotrophin, protein V-1 99.7 3.6E-17 1.2E-21 148.3 10.9 94 635-759 5-98 (123)
99 2zgd_A 3 repeat synthetic anky 99.7 5.5E-17 1.9E-21 145.8 10.0 90 633-753 20-109 (110)
100 2jab_A H10-2-G3; HER2, darpin, 99.7 8.4E-17 2.9E-21 148.6 9.9 94 635-759 12-105 (136)
101 1n0r_A 4ANK, 4 ankyrin repeats 99.7 3.6E-16 1.2E-20 139.3 11.0 93 636-759 1-93 (126)
102 3ehr_A Osteoclast-stimulating 99.7 2.9E-16 1E-20 155.8 11.2 96 634-759 70-165 (222)
103 2vge_A RELA-associated inhibit 99.6 2.1E-16 7.2E-21 160.5 9.8 96 634-760 18-113 (229)
104 1sw6_A Regulatory protein SWI6 99.6 7.9E-17 2.7E-21 171.1 6.5 123 597-758 99-229 (327)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.6 6.8E-16 2.3E-20 133.8 10.1 89 596-718 3-91 (93)
106 2l6b_A NR1C; ankyrin, consensu 99.6 2.4E-16 8.3E-21 140.9 7.1 104 595-738 9-112 (115)
107 1bi7_B P16INK4A, MTS1, multipl 99.6 3.2E-16 1.1E-20 148.0 8.0 94 634-759 9-103 (156)
108 3deo_A Signal recognition part 99.6 5.5E-16 1.9E-20 150.3 9.7 95 633-759 40-135 (183)
109 2aja_A Ankyrin repeat family p 99.6 5.5E-17 1.9E-21 178.5 1.7 128 596-758 93-223 (376)
110 2b0o_E UPLC1; arfgap, structur 99.6 3.2E-16 1.1E-20 166.3 6.4 107 595-747 190-299 (301)
111 3ui2_A Signal recognition part 99.6 1.4E-15 4.9E-20 155.0 8.8 94 634-759 42-136 (244)
112 2aja_A Ankyrin repeat family p 99.5 5.1E-16 1.7E-20 170.9 0.4 120 596-760 129-251 (376)
113 2zgd_A 3 repeat synthetic anky 99.5 1.2E-13 4E-18 124.1 9.6 86 595-714 24-109 (110)
114 3lvq_E ARF-GAP with SH3 domain 99.5 7.4E-14 2.5E-18 157.3 9.9 103 595-743 171-276 (497)
115 1dcq_A PYK2-associated protein 99.4 1.5E-13 5E-18 144.1 8.6 90 595-718 169-261 (278)
116 3jue_A Arfgap with coiled-coil 99.4 3.7E-13 1.3E-17 147.9 10.1 93 636-759 198-293 (368)
117 1wj0_A Squamosa promoter-bindi 99.0 5E-11 1.7E-15 100.0 -0.9 36 2-38 25-60 (60)
118 2cxk_A Camta1, calmodulin bind 54.3 41 0.0014 30.2 7.8 45 426-471 7-51 (95)
119 1uad_C RSEC5, exocyst complex 44.3 44 0.0015 30.0 6.4 39 425-465 7-46 (99)
120 1pby_A Quinohemoprotein amine 23.0 1.3E+02 0.0044 34.6 6.9 44 420-463 270-318 (489)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=5.6e-23 Score=201.14 Aligned_cols=150 Identities=23% Similarity=0.154 Sum_probs=121.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch-
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS- 670 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~- 670 (872)
+.+.|+.|+.+|+.++|+.||+.++ +++..|..|+||||+|+..++.+++++||++|++++. +|.+|
T Consensus 4 lg~~L~~Aa~~G~~~~v~~Ll~~Ga---------dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpL 74 (169)
T 4gpm_A 4 LGKRLIEAAENGNKDRVKDLIENGA---------DVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPL 74 (169)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHCCC---------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHH
Confidence 3467899999999999999998763 3445577899999999999999999999999998874 35555
Q ss_pred ------hhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002868 671 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 744 (872)
Q Consensus 671 ------~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~ 744 (872)
....+++..- .+++++|.+|..|+||||+||..++.+ +|++|++.+ |++|.+|.+|+||||+|+.+
T Consensus 75 h~A~~~g~~~~v~~Ll-~~gadvn~~d~~G~TpLh~A~~~g~~~-~v~~Ll~~g------ad~~~~d~~G~TpL~~A~~~ 146 (169)
T 4gpm_A 75 HHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKE-VVKLLISKG------ADVNTSDSDGRTPLDLAREH 146 (169)
T ss_dssp HHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHH-HCcCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCccccCCCCCCHHHHHHHc
Confidence 2334444211 136789999999999999999998876 999998864 78899999999999999999
Q ss_pred CCHHHHHHHHHhhhhcC
Q 002868 745 AHHSYIHLVQRKINKKS 761 (872)
Q Consensus 745 Gn~~iveLL~~k~~~~~ 761 (872)
|+.+++++|++++++..
T Consensus 147 g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 147 GNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp TCHHHHHHHHTC-----
T ss_pred CCHHHHHHHHHCCCCcC
Confidence 99999999999988754
No 2
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=1.2e-21 Score=181.07 Aligned_cols=123 Identities=24% Similarity=0.194 Sum_probs=109.2
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002868 594 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 673 (872)
Q Consensus 594 R~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k 673 (872)
...++||+|+..|+.++++.||+.+.+ ++..+..|.||||+|+..|+.++|++||++|++
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------- 72 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGAD---------VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD----------- 72 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----------
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCC---------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------
Confidence 346899999999999999999987532 334467799999999999999999999999864
Q ss_pred HHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002868 674 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 753 (872)
Q Consensus 674 ~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL 753 (872)
+|.+|..|.||||+|+..++.+ ++++|++++ ++++.+|.+|.||||+|+.+|+.+++++|
T Consensus 73 -------------~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 73 -------------VNAVDAIGFTPLHLAAFIGHLE-IAEVLLKHG------ADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp -------------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -------------CCcCCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 6788899999999999998876 999998864 77899999999999999999999999999
Q ss_pred HHh
Q 002868 754 QRK 756 (872)
Q Consensus 754 ~~k 756 (872)
+++
T Consensus 133 l~~ 135 (136)
T 2jab_A 133 QKL 135 (136)
T ss_dssp HHC
T ss_pred HHc
Confidence 875
No 3
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.86 E-value=4.1e-22 Score=184.27 Aligned_cols=124 Identities=21% Similarity=0.178 Sum_probs=110.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
..++||+|+..|+.++++.||+.+. +++..+..|+||||+|+. ++.++|++||++|++
T Consensus 12 g~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~------------ 69 (136)
T 1d9s_A 12 SDAGLATAAARGQVETVRQLLEAGA---------DPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE------------ 69 (136)
T ss_dssp CSCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC------------
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCC---------CcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC------------
Confidence 4689999999999999999998753 233446789999999999 999999999999864
Q ss_pred HHhhhccCccccCCcCCCC-CchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002868 675 LVDRAGSGFIFKPNVIGPA-GLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 753 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~-G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL 753 (872)
+|.+|.. |.||||+|+..++.+ ++++|++.+ +++|.+|..|.||||+|+.+|+.+++++|
T Consensus 70 ------------~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~~d~~g~tpl~~A~~~~~~~~~~~L 130 (136)
T 1d9s_A 70 ------------PNCADPATLTRPVHDAAREGFLD-TLVVLHRAG------ARLDVCDAWGRLPVDLAEEQGHRDIARYL 130 (136)
T ss_dssp ------------SSCCBTTTTBCHHHHHHHHTCHH-HHHHHHHTC------CCCCCCSSSSSCHHHHHHHHTCHHHHHHH
T ss_pred ------------CCCcCCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCCccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 6788888 999999999998876 999998764 78899999999999999999999999999
Q ss_pred HHhhhh
Q 002868 754 QRKINK 759 (872)
Q Consensus 754 ~~k~~~ 759 (872)
+++.+|
T Consensus 131 l~~Gad 136 (136)
T 1d9s_A 131 HAATGD 136 (136)
T ss_dssp HHHHCC
T ss_pred HHcCCC
Confidence 998764
No 4
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=5.1e-21 Score=170.68 Aligned_cols=124 Identities=29% Similarity=0.268 Sum_probs=109.5
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|+.++++.|++.+.+ ++..+..|.||||+|+..++.+++++|+++|++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~---------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------- 60 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGAD---------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------- 60 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCC---------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------------
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCC---------CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-------------
Confidence 4799999999999999999987632 233466799999999999999999999999864
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
+|.+|..|.||||+|+..++.+ ++++|++.+ ++++.+|..|.||||+|+..|+.+++++|++
T Consensus 61 -----------~~~~~~~g~t~l~~A~~~~~~~-~~~~Ll~~g------~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 61 -----------VNAKDKNGRTPLHLAARNGHLE-VVKLLLEAG------ADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CcccCCCCCcHHHHHHHcChHH-HHHHHHHcC------CCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 6778889999999999998876 999998764 7789999999999999999999999999999
Q ss_pred hhhh
Q 002868 756 KINK 759 (872)
Q Consensus 756 k~~~ 759 (872)
+.++
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 8764
No 5
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.85 E-value=8.8e-21 Score=180.47 Aligned_cols=127 Identities=24% Similarity=0.137 Sum_probs=109.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
-.++||+|+..|+.+++++||+.+.+ ++..+..|.||||+|+..|+.++|++|+++|++
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 94 (172)
T 3v30_A 36 GFTPLIWASAFGEIETVRFLLEWGAD---------PHILAKERESALSLASTGGYTDIVGLLLERDVD------------ 94 (172)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCC---------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC---------chhhcccCCCHHHHHHHCCCHHHHHHHHHcCCC------------
Confidence 35789999999999999999987632 233456789999999999999999999998764
Q ss_pred HHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002868 675 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 754 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~ 754 (872)
+|.+|..|.||||+|+..++.+ ++++|++.+ ++++.+|..|.||||+|+.+|+.+++++|+
T Consensus 95 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 95 ------------INIYDWNGGTPLLYAVRGNHVK-CVEALLARG------ADLTTEADSGYTPMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCccccCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 6888999999999999998876 999998864 788999999999999999999999999999
Q ss_pred HhhhhcC
Q 002868 755 RKINKKS 761 (872)
Q Consensus 755 ~k~~~~~ 761 (872)
++..+..
T Consensus 156 ~~~~~~~ 162 (172)
T 3v30_A 156 NHILKLF 162 (172)
T ss_dssp HHHHHHS
T ss_pred HHHHHHh
Confidence 9988754
No 6
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=2.6e-20 Score=184.62 Aligned_cols=161 Identities=14% Similarity=0.055 Sum_probs=122.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---------
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL--------- 665 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a--------- 665 (872)
-.++||+|+..|+.++++.||+.+.+... ......+..|.||||+|+..|+.++|++||++|++.+.
T Consensus 37 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~ 112 (232)
T 2rfa_A 37 GETALHIAALYDNLEAAMVLMEAAPELVF----EPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHY 112 (232)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCGGGGG----CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCchhcc----ccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceee
Confidence 35899999999999999999998644211 11233466799999999999999999999999998764
Q ss_pred -------CCCch-------hhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHH----HHhhcCCCCCCccccc
Q 002868 666 -------DKPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVL----DALTDDPGSVGIEAWK 727 (872)
Q Consensus 666 -------dg~~~-------~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VV----elLL~~p~~Ig~gA~v 727 (872)
+|.++ ....+++..- .+++++|.+|..|.||||+|+..++.+ ++ ++|++.++.+......
T Consensus 113 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~t~L~~A~~~~~~~-~~~~i~~~Ll~~g~~~~~~~~~ 190 (232)
T 2rfa_A 113 RPHNLIYYGEHPLSFAACVGSEEIVRLLI-EHGADIRAQDSLGNTVLHILILQPNKT-FACQMYNLLLSYDGGDHLKSLE 190 (232)
T ss_dssp CTTCSCCCCSSHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHTCSCHH-HHHHHHHHHHHTTCSCSSCCGG
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCChH-HHHHHHHHHHhcCCchhhhhhh
Confidence 24444 2333444221 136789999999999999999998775 66 8998876332211122
Q ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC
Q 002868 728 SAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS 761 (872)
Q Consensus 728 NakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~~~ 761 (872)
|.+|..|+||||+|+.+|+.+++++|+++.....
T Consensus 191 ~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 191 LVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 6899999999999999999999999999877644
No 7
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.84 E-value=6.7e-21 Score=178.80 Aligned_cols=123 Identities=20% Similarity=0.211 Sum_probs=100.2
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+. |+.++++.|++.+.+ ++..+..|.||||+|++.|+.++|++||++|+
T Consensus 39 ~t~L~~A~~-~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------------- 94 (162)
T 1ihb_A 39 RTALQVMKL-GNPEIARRLLLRGAN---------PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQA-------------- 94 (162)
T ss_dssp CCHHHHCCS-SCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--------------
T ss_pred ccHHHHHHc-CcHHHHHHHHHcCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC--------------
Confidence 478888888 888888888876522 22335668888888888888888888888875
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcccc-ccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW-KSAQDSTGLTPNDYASLRAHHSYIHLVQ 754 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~-vNakD~~G~TPLHyAa~~Gn~~iveLL~ 754 (872)
++|.+|..|.||||+|+..++.+ ++++|++.+ ++ ++.+|..|.||||+|+.+|+.+++++|+
T Consensus 95 ----------~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 157 (162)
T 1ihb_A 95 ----------DVNIEDNEGNLPLHLAAKEGHLR-VVEFLVKHT------ASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 157 (162)
T ss_dssp ----------CTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHHS------CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ----------CCCCcCCCCCCHHHHHHHcCCHH-HHHHHHHcc------CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 46888999999999999998876 999998865 44 5899999999999999999999999999
Q ss_pred Hhhhh
Q 002868 755 RKINK 759 (872)
Q Consensus 755 ~k~~~ 759 (872)
++.+|
T Consensus 158 ~~GAd 162 (162)
T 1ihb_A 158 ANGAG 162 (162)
T ss_dssp HTC--
T ss_pred HhCCC
Confidence 98764
No 8
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.84 E-value=1.3e-20 Score=176.82 Aligned_cols=118 Identities=19% Similarity=0.148 Sum_probs=97.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|+.++++.|++.+. +++..+..|+||||+|++.|+.++|++|+++|++
T Consensus 35 ~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 92 (153)
T 1awc_B 35 TSPLHLAAQYGHFSTTEVLLRAGV---------SRDARTKVDRTPLHMAASEGHANIVEVLLKHGAD------------- 92 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTC---------CTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC---------CCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCC-------------
Confidence 478888888888888888887652 2333456688888888888888888888888754
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 753 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL 753 (872)
+|.+|..|.||||+|+..++.+ ++++|++++ ++++.+|.+|.||||+|+.+|+.+++++|
T Consensus 93 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 93 -----------VNAKDMLKMTALHWATEHNHQE-VVELLIKYG------ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 6788889999999999988776 999998754 77899999999999999999999999987
No 9
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.84 E-value=2e-20 Score=177.17 Aligned_cols=126 Identities=21% Similarity=0.155 Sum_probs=101.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|+.++++.||+.+.+ ++..+..|.||||+|+..|+.++|++|+++|+
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------------- 93 (167)
T 3v31_A 37 FTPLMWAAAHGQIAVVEFLLQNGAD---------PQLLGKGRESALSLACSKGYTDIVKMLLDCGV-------------- 93 (167)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTC--------------
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCC---------CCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCC--------------
Confidence 4677777777777777777766422 22335567777777777777777777777765
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
++|.+|..|.||||+|+..++.+ ++++|++.+ ++++.+|.+|.||||+|+..|+.+++++|++
T Consensus 94 ----------~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 94 ----------DVNEYDWNGGTPLLYAVHGNHVK-CVKMLLESG------ADPTIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp ----------CTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred ----------CCCcCCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 46888999999999999998876 999998754 7789999999999999999999999999999
Q ss_pred hhhhcC
Q 002868 756 KINKKS 761 (872)
Q Consensus 756 k~~~~~ 761 (872)
+..+..
T Consensus 157 ~~~~~~ 162 (167)
T 3v31_A 157 HLLKLL 162 (167)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 877644
No 10
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.83 E-value=1.9e-20 Score=189.18 Aligned_cols=163 Identities=22% Similarity=0.118 Sum_probs=113.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCC----------
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV---------- 664 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~---------- 664 (872)
-.++||+|+..|+.+++++||+.+++ ++..+..|+||||+|++.|+.++|++|+++|++..
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~~ga~---------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (282)
T 1oy3_D 45 GQTALHLAAILGEASTVEKLYAAGAG---------VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQ 115 (282)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC---------SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC---------CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhc
Confidence 35899999999999999999987633 33446789999999999999999999999886521
Q ss_pred -------------------------------------C---CCCchh-------hHHHHhhhccCccccCCcCCCC-Cch
Q 002868 665 -------------------------------------L---DKPGSR-------QKQLVDRAGSGFIFKPNVIGPA-GLT 696 (872)
Q Consensus 665 -------------------------------------a---dg~~~~-------~k~lv~~~s~~y~~dvNa~d~~-G~T 696 (872)
. +|.++. ...+++..- .+++++|.++.. |.|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~t 194 (282)
T 1oy3_D 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR-DAGADLNKPEPTCGRT 194 (282)
T ss_dssp ----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCC
T ss_pred ccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcC
Confidence 1 233331 222333111 125678887754 899
Q ss_pred HHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC--CCCCceeeecCCC
Q 002868 697 PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIPGS 774 (872)
Q Consensus 697 PLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~~~--~~~~~v~~~i~~~ 774 (872)
|||+|+..++.+ +|++|+++| |++|.+|..|.||||+|+.+|+.+++++|+++.++.. ..+|...+++..+
T Consensus 195 pL~~A~~~~~~~-~v~~Ll~~g------ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 195 PLHLAVEAQAAS-VLELLLKAG------ADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp HHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred HHHHHHHcCCHH-HHHHHHHcC------CCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 999999888765 888887754 7788899999999999999999999999988866522 1344555554443
No 11
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.83 E-value=2.9e-20 Score=180.36 Aligned_cols=122 Identities=22% Similarity=0.166 Sum_probs=94.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|+.++++.|++.+.+ ++..+..|.||||+|+..|+.++|++|+++|+
T Consensus 69 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------------- 125 (192)
T 2rfm_A 69 STALIWAVKNNRLGIAEKLLSKGSN---------VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGA-------------- 125 (192)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCC---------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--------------
T ss_pred ccHHHHHHHcCCHHHHHHHHHCCCC---------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC--------------
Confidence 3567777777777777777665422 22234556677777777777777777776654
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
++|.+|..|.||||+|+..++.+ ++++|++.+ ++++.+|..|.||||+|+.+|+.+++++|++
T Consensus 126 ----------~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 188 (192)
T 2rfm_A 126 ----------NVNDRNLEGETPLIVASKYGRSE-IVKKLLELG------ADISARDLTGLTAEASARIFGRQEVIKIFTE 188 (192)
T ss_dssp ----------CSSCCCTTCCCHHHHHHHHTCHH-HHHHHHHTT------CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHCC------CCCCCcCCCCCCHHHHHHHhCcHHHHHHHHh
Confidence 47888999999999999998876 999998754 7889999999999999999999999999987
Q ss_pred hh
Q 002868 756 KI 757 (872)
Q Consensus 756 k~ 757 (872)
+.
T Consensus 189 ~~ 190 (192)
T 2rfm_A 189 VR 190 (192)
T ss_dssp HH
T ss_pred cc
Confidence 64
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.83 E-value=3.4e-20 Score=173.95 Aligned_cols=124 Identities=20% Similarity=0.152 Sum_probs=109.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
+.++|++|+..|+.++++.|++.+.+ ++ .+..|.||||+|+..|+.++|++|+++|++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~--~~--------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 59 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP--FT--------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS------------ 59 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC--CC--------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC--CC--------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 35799999999999999999988632 11 255799999999999999999999999864
Q ss_pred HHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002868 675 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 754 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~ 754 (872)
+|.++..|.||||+|+..++.+ ++++|+++ |+++|.+|.+|.||||+|+.+|+.+++++|+
T Consensus 60 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 120 (153)
T 1awc_B 60 ------------RDARTKVDRTPLHMAASEGHAN-IVEVLLKH------GADVNAKDMLKMTALHWATEHNHQEVVELLI 120 (153)
T ss_dssp ------------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcChHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 6778899999999999998876 99999875 4788999999999999999999999999999
Q ss_pred Hhhhh
Q 002868 755 RKINK 759 (872)
Q Consensus 755 ~k~~~ 759 (872)
++.++
T Consensus 121 ~~ga~ 125 (153)
T 1awc_B 121 KYGAD 125 (153)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 88654
No 13
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.83 E-value=4.2e-21 Score=181.46 Aligned_cols=126 Identities=21% Similarity=0.176 Sum_probs=108.8
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002868 594 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 673 (872)
Q Consensus 594 R~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k 673 (872)
...++||+|+..|+.++++.||+.+. +++..+..|+||||+|+ .|+.++|++||++|++
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~----------- 69 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGA---------NPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE----------- 69 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTC---------CTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-----------
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCC---------CCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-----------
Confidence 34689999999999999999997753 33344678999999995 9999999999999864
Q ss_pred HHHhhhccCccccCCcCCCCCch-HHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002868 674 QLVDRAGSGFIFKPNVIGPAGLT-PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 752 (872)
Q Consensus 674 ~lv~~~s~~y~~dvNa~d~~G~T-PLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveL 752 (872)
+|.+|..|.| |||+|+..++.+ ++++|+++ |+++|.+|.+|.||||+|+.+|+.+++++
T Consensus 70 -------------~~~~d~~g~ttpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 70 -------------PNCADPATLTRPVHDAAREGFLD-TLVVLHRA------GARLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp -------------CCCCCTTTCCCHHHHHHHHTCHH-HHHHHHHH------TCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred -------------CCCcCCCCCcHHHHHHHHCCCHH-HHHHHHHc------CCCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 6888999999 999999998876 99999875 47889999999999999999999999999
Q ss_pred HHHhhhhc
Q 002868 753 VQRKINKK 760 (872)
Q Consensus 753 L~~k~~~~ 760 (872)
|+++.++.
T Consensus 130 Ll~~ga~~ 137 (156)
T 1bi7_B 130 LRAAAGGT 137 (156)
T ss_dssp HSSCC---
T ss_pred HHHcCCCC
Confidence 99886653
No 14
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.83 E-value=3.4e-20 Score=177.03 Aligned_cols=121 Identities=25% Similarity=0.199 Sum_probs=91.1
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|+.++++.||+.+.+ ++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 48 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-------------- 104 (169)
T 2y1l_E 48 WTPLHLAAFNGHLEIVEVLLKNGAD---------VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGA-------------- 104 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC--------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC---------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC--------------
Confidence 3567777777777777777665421 22234556677777777777777777776664
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
++|.+|..|.||||+|+..++.+ ++++|++++ ++++.+|..|.||||+|+.+|+.+++++|++
T Consensus 105 ----------~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 105 ----------DVNANDMEGHTPLHLAAMFGHLE-IVEVLLKNG------ADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp ----------CTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred ----------CCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 46778889999999999988776 999998754 7788999999999999999999999999886
Q ss_pred h
Q 002868 756 K 756 (872)
Q Consensus 756 k 756 (872)
+
T Consensus 168 ~ 168 (169)
T 2y1l_E 168 L 168 (169)
T ss_dssp C
T ss_pred c
Confidence 4
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.83 E-value=5.1e-20 Score=186.04 Aligned_cols=151 Identities=21% Similarity=0.146 Sum_probs=119.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh-
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR- 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~- 671 (872)
+++||+|+..|+.++++.||+.+.+.+ .++..+..|+||||+|+..|+.++|++||++|++.+. .|.++.
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 83 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHE------YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALH 83 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSG------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcc------cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 589999999999999999998874421 1233466799999999999999999999999998774 344441
Q ss_pred ------hHHHHhh-hcc---------------------------------------------CccccCCcCCCCCchHHH
Q 002868 672 ------QKQLVDR-AGS---------------------------------------------GFIFKPNVIGPAGLTPLH 699 (872)
Q Consensus 672 ------~k~lv~~-~s~---------------------------------------------~y~~dvNa~d~~G~TPLH 699 (872)
...++.. ... .+++++|.++..|.||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 2223331 111 123458889999999999
Q ss_pred HHHhcCChHHHHHHhhcCCCCCCccccccccCCC-CCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 700 VAACRDDAENVLDALTDDPGSVGIEAWKSAQDST-GLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 700 lAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~-G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
+|+..++.+ ++++|++. |+++|.+|.. |.||||+|+.+|+.+++++|+++.++
T Consensus 164 ~A~~~g~~~-~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad 217 (282)
T 1oy3_D 164 VAVIHKDAE-MVRLLRDA------GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD 217 (282)
T ss_dssp HHHHTTCHH-HHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999998876 99999875 4788999865 99999999999999999999998665
No 16
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.83 E-value=1.7e-20 Score=189.58 Aligned_cols=138 Identities=17% Similarity=0.076 Sum_probs=110.0
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhhcCCcCCC-----CCCchhhhccCCcHHHHHHHcCCHHHHHHHHh---cCCCCCC
Q 002868 594 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTG-----DHTSSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVL 665 (872)
Q Consensus 594 R~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~-----~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~---~Gad~~a 665 (872)
.-.++||+|+.+|+.+++++||+.+.+.+.... ..+....+..|+||||+|+..|+.++|++||+ +|+
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga---- 167 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA---- 167 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC----
Confidence 346899999999999999999997643222100 00000001469999999999999999999999 665
Q ss_pred CCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCCh--------HHHHHHhhcCCCCCCccccc-------ccc
Q 002868 666 DKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA--------ENVLDALTDDPGSVGIEAWK-------SAQ 730 (872)
Q Consensus 666 dg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~--------e~VVelLL~~p~~Ig~gA~v-------Nak 730 (872)
++|.+|..|+||||+|+..++. .+++++|++. ||++ +.+
T Consensus 168 --------------------~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~~~~~ 221 (260)
T 3jxi_A 168 --------------------DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK------CAKLFPDTNLEALL 221 (260)
T ss_dssp --------------------CTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCC
T ss_pred --------------------CCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh------Ccccccccchhhcc
Confidence 4788999999999999987662 2499999875 4677 789
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC
Q 002868 731 DSTGLTPNDYASLRAHHSYIHLVQRKINKKS 761 (872)
Q Consensus 731 D~~G~TPLHyAa~~Gn~~iveLL~~k~~~~~ 761 (872)
|.+|.||||+|+.+|+.+++++|+++..+..
T Consensus 222 d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 222 NNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 9999999999999999999999999987654
No 17
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.83 E-value=4e-20 Score=176.58 Aligned_cols=125 Identities=24% Similarity=0.223 Sum_probs=110.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
..++|++|+..|+.++++.||+.+.+ ++..+..|.||||+|++.|+.++|++||++|++
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 72 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGAD---------VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD------------ 72 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 35799999999999999999987632 334466899999999999999999999999864
Q ss_pred HHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002868 675 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 754 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~ 754 (872)
+|.+|..|.||||+|+..++.+ ++++|++++ +++|.+|.+|.||||+|+.+|+.+++++|+
T Consensus 73 ------------~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 133 (169)
T 2y1l_E 73 ------------VNAVDHAGMTPLRLAALFGHLE-IVEVLLKNG------ADVNANDMEGHTPLHLAAMFGHLEIVEVLL 133 (169)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCccCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 6778899999999999998876 999998864 778999999999999999999999999999
Q ss_pred Hhhhh
Q 002868 755 RKINK 759 (872)
Q Consensus 755 ~k~~~ 759 (872)
++.++
T Consensus 134 ~~g~~ 138 (169)
T 2y1l_E 134 KNGAD 138 (169)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 88654
No 18
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.83 E-value=1.4e-20 Score=176.51 Aligned_cols=125 Identities=15% Similarity=0.104 Sum_probs=109.8
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002868 594 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 673 (872)
Q Consensus 594 R~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k 673 (872)
++.++||+|+..|..++++.||+.+. +++..+..|.||||+|+. |+.++|++||++|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~---------~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~----------- 62 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNV---------NVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN----------- 62 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCC---------CTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-----------
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCC---------CccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-----------
Confidence 46789999999999999999997642 333446789999999999 999999999999864
Q ss_pred HHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002868 674 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 753 (872)
Q Consensus 674 ~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL 753 (872)
+|.++..|.||||+|+..++.+ ++++|++++ +++|.+|.+|.||||+|+..|+.+++++|
T Consensus 63 -------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 122 (162)
T 1ihb_A 63 -------------PDLKDRTGFAVIHDAARAGFLD-TLQTLLEFQ------ADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122 (162)
T ss_dssp -------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 6788899999999999998876 999998864 78899999999999999999999999999
Q ss_pred HHhhhh
Q 002868 754 QRKINK 759 (872)
Q Consensus 754 ~~k~~~ 759 (872)
+++.++
T Consensus 123 l~~g~~ 128 (162)
T 1ihb_A 123 VKHTAS 128 (162)
T ss_dssp HHHSCC
T ss_pred HHccCC
Confidence 998664
No 19
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.83 E-value=1.5e-20 Score=177.79 Aligned_cols=121 Identities=23% Similarity=0.177 Sum_probs=92.2
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|+.++++.||+.+. +++..+..|+||||+|++.|+.++|++|+++|++
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 100 (165)
T 3twr_A 43 STPLHFAAGYNRVSVVEYLLQHGA---------DVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV------------- 100 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred CCHHHHHHHcChHHHHHHHHhcCC---------CCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-------------
Confidence 478888888888888888887652 2333456688888888888888888888888754
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
+|.+|..|.||||+|+..++.+ ++++|++++ ++++.+|.+|.||||+|+. |+.+++++|.+
T Consensus 101 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 101 -----------VNVADLWKFTPLHEAAAKGKYE-ICKLLLQHG------ADPTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred -----------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 5677778888888888887765 888887653 6778888888888888766 78888888876
Q ss_pred hh
Q 002868 756 KI 757 (872)
Q Consensus 756 k~ 757 (872)
+.
T Consensus 162 ~g 163 (165)
T 3twr_A 162 DA 163 (165)
T ss_dssp C-
T ss_pred cc
Confidence 64
No 20
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.83 E-value=2.4e-20 Score=180.93 Aligned_cols=124 Identities=19% Similarity=0.064 Sum_probs=110.1
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|+.++++.|++.+.+ ++..+..|.||||+|++.|+.++|++|+++|++
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 93 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDK---------LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN------------- 93 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccc---------cccccccCccHHHHHHHcCCHHHHHHHHHCCCC-------------
Confidence 4899999999999999999998632 223466799999999999999999999999864
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
+|.+|..|.||||+|+..++.+ ++++|++++ +++|.+|.+|.||||+|+..|+.+++++|++
T Consensus 94 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (192)
T 2rfm_A 94 -----------VNTKDFSGKTPLMWSIIFGYSE-MSYFLLEHG------ANVNDRNLEGETPLIVASKYGRSEIVKKLLE 155 (192)
T ss_dssp -----------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHHTT------CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred -----------CCCCCCCCCcHHHHHHHcCCHH-HHHHHHHCC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 6788899999999999998876 999998764 7889999999999999999999999999998
Q ss_pred hhhh
Q 002868 756 KINK 759 (872)
Q Consensus 756 k~~~ 759 (872)
+.++
T Consensus 156 ~ga~ 159 (192)
T 2rfm_A 156 LGAD 159 (192)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 8554
No 21
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.82 E-value=2.9e-20 Score=173.77 Aligned_cols=120 Identities=23% Similarity=0.256 Sum_probs=102.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
-.++||+ +..|+.++++.|++.+. +++..+..|.||||+|+..|+.++|++|+++|++
T Consensus 36 g~t~L~~-~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 93 (156)
T 1bd8_A 36 GKTALQV-MMFGSTAIALELLKQGA---------SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD------------ 93 (156)
T ss_dssp SCCHHHH-SCTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCcHHHH-HHcCCHHHHHHHHHCCC---------CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------------
Confidence 3578999 88899999999997753 2334466789999999999999999999998764
Q ss_pred HHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002868 675 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 754 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~ 754 (872)
+|.+|..|.||||+|+..++.+ ++++|++. ++++.+|.+|.||||+|+.+|+.+++++|+
T Consensus 94 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~-------~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 94 ------------VNVPDGTGALPIHLAVQEGHTA-VVSFLAAE-------SDLHRRDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp ------------SCCCCTTSCCHHHHHHHHTCHH-HHHHHHTT-------SCTTCCCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred ------------CCCcCCCCCcHHHHHHHhChHH-HHHHHHhc-------cCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 6788899999999999998876 99999763 677999999999999999999999999998
Q ss_pred Hh
Q 002868 755 RK 756 (872)
Q Consensus 755 ~k 756 (872)
++
T Consensus 154 ~~ 155 (156)
T 1bd8_A 154 GH 155 (156)
T ss_dssp TT
T ss_pred hh
Confidence 76
No 22
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.82 E-value=3.5e-20 Score=175.55 Aligned_cols=124 Identities=16% Similarity=0.114 Sum_probs=109.6
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|..++++.||+.+. +.+..+..|+||||+|++.|+.++|++|+++|++
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 61 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQEN---------VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD------------- 61 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSS---------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred cchHHHHHHCCCHHHHHHHHHcCC---------CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-------------
Confidence 478999999999999999998752 2334467899999999999999999999999864
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
+|.++..|.||||+|+..++.+ ++++|++. ++++|.+|.+|.||||+|+.+|+.+++++|++
T Consensus 62 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 62 -----------PQLLGKGRESALSLACSKGYTD-IVKMLLDC------GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp -----------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHHH------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCCcCCCCCcHHHHHHHcCCHH-HHHHHHHC------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 6778899999999999998876 99999875 47889999999999999999999999999998
Q ss_pred hhhh
Q 002868 756 KINK 759 (872)
Q Consensus 756 k~~~ 759 (872)
+.++
T Consensus 124 ~g~~ 127 (167)
T 3v31_A 124 SGAD 127 (167)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 7654
No 23
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.82 E-value=4.3e-20 Score=189.43 Aligned_cols=162 Identities=18% Similarity=0.098 Sum_probs=121.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR 671 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~ 671 (872)
-.++||+|+..|+.+++++||+.+. +++..+..|.||||+|+..|+.++|++||++|++.+. +|.++.
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~ga---------~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l 143 (299)
T 1s70_B 73 GLTALHQACIDDNVDMVKFLVENGA---------NINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPL 143 (299)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCC---------CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence 3589999999999999999998753 2334466799999999999999999999999988763 344431
Q ss_pred -------hHHHHhhhccCcc--------------------------ccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002868 672 -------QKQLVDRAGSGFI--------------------------FKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 718 (872)
Q Consensus 672 -------~k~lv~~~s~~y~--------------------------~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p 718 (872)
...++...-..++ ......+..|.||||+|+..++.+ ++++|++.
T Consensus 144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~- 221 (299)
T 1s70_B 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTE-VLKLLIQA- 221 (299)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHH-HHHHHHTT-
T ss_pred HHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHH-HHHHHHHc-
Confidence 1222211000001 122345678999999999998876 99999875
Q ss_pred CCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC--CCCCceeeecC
Q 002868 719 GSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIP 772 (872)
Q Consensus 719 ~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~~~--~~~~~v~~~i~ 772 (872)
|+++|.+|.+|.||||+|+.+|+.+++++|+++.++.. ...|+..+++.
T Consensus 222 -----g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 222 -----RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp -----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred -----CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 47889999999999999999999999999999876532 12344444444
No 24
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.82 E-value=4.5e-20 Score=174.42 Aligned_cols=125 Identities=23% Similarity=0.180 Sum_probs=109.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||.|+..|+.++++.||+.. +.+....+..|+||||+|++.|+.++|++||++|++
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~--------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 67 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQ--------SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD------------- 67 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTT--------TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred hHHHHHHHHhCCHHHHHHHHHcC--------CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-------------
Confidence 57999999999999999998653 123334466789999999999999999999999864
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
+|.+|..|.||||+|+..++.+ ++++|++.+ +++|.+|..|.||||+|+.+|+.+++++|++
T Consensus 68 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 129 (165)
T 3twr_A 68 -----------VHAKDKGGLVPLHNACSYGHYE-VAELLVKHG------AVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 129 (165)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCccCCCCCCHHHHHHHcCcHH-HHHHHHhCC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 6788999999999999998876 999998864 7789999999999999999999999999998
Q ss_pred hhhh
Q 002868 756 KINK 759 (872)
Q Consensus 756 k~~~ 759 (872)
+.++
T Consensus 130 ~ga~ 133 (165)
T 3twr_A 130 HGAD 133 (165)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 8654
No 25
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.82 E-value=7e-20 Score=192.61 Aligned_cols=159 Identities=14% Similarity=0.030 Sum_probs=122.8
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCC-CCCCchhhhccCCcHHHHHHHcCCHHHHHHHHh-cCCCCCC---CCCch
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDT-GDHTSSELAILEMGLLHKAVRRNCRPMVELLLN-YAPDNVL---DKPGS 670 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~-~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~-~Gad~~a---dg~~~ 670 (872)
.++||+|+..|+.++++.|++.+.+.++.. ...+....+..|.||||+|+++|+.++|++||+ .|++++. .|.++
T Consensus 126 ~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~ 205 (337)
T 4g8k_A 126 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA 205 (337)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcH
Confidence 579999999999999999999876544321 111223335579999999999999999999995 5888774 23332
Q ss_pred h-----------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHH
Q 002868 671 R-----------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPND 739 (872)
Q Consensus 671 ~-----------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLH 739 (872)
. ...++...- .+++++|.+|..|+||||+|+..++.+ +++.|+... ++++|.+|.+|+||||
T Consensus 206 l~~~~~~~~~~~~~~i~~lLl-~~gad~n~~d~~g~t~L~~a~~~~~~~-~v~~Ll~~~-----~~~vn~~d~~G~TpL~ 278 (337)
T 4g8k_A 206 LIHALLSSDDSDVEAITHLLL-DHGADVNVRGERGKTPLILAVEKKHLG-LVQRLLEQE-----HIEINDTDSDGKTALL 278 (337)
T ss_dssp HHHHHHHSCTTTHHHHHHHHH-HTTCCTTCCCGGGCCHHHHHHHTTCHH-HHHHHHTST-----TCCTTCBCTTSCBHHH
T ss_pred HHHHHHHcCcccHHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHhhhhH-HHHHHHHhc-----CCcccCcCCCCCCHHH
Confidence 1 223444211 236789999999999999999998876 888887643 5789999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhhcC
Q 002868 740 YASLRAHHSYIHLVQRKINKKS 761 (872)
Q Consensus 740 yAa~~Gn~~iveLL~~k~~~~~ 761 (872)
+|+.+|+.++|++|+++.++..
T Consensus 279 ~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 279 LAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp HHHHTTCHHHHHHHHTTSCSST
T ss_pred HHHHcCCHHHHHHHHHCCCCCC
Confidence 9999999999999999877644
No 26
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.82 E-value=4.8e-20 Score=175.39 Aligned_cols=124 Identities=15% Similarity=0.078 Sum_probs=108.5
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002868 597 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 676 (872)
Q Consensus 597 ~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv 676 (872)
++||+|+..|+.++++.||+.+.. ..+..+..|+||||+|++.|+.++|++||++|++
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------------- 61 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDN--------LVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-------------- 61 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSG--------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC--------------
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcc--------cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------------
Confidence 589999999999999999976421 1334466799999999999999999999999864
Q ss_pred hhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002868 677 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 756 (872)
Q Consensus 677 ~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k 756 (872)
+|.++..|.||||+|+..++.+ ++++|++.+ +++|.+|.+|.||||+|+.+|+.+++++|+++
T Consensus 62 ----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 124 (172)
T 3v30_A 62 ----------PHILAKERESALSLASTGGYTD-IVGLLLERD------VDINIYDWNGGTPLLYAVRGNHVKCVEALLAR 124 (172)
T ss_dssp ----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHTTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ----------chhhcccCCCHHHHHHHCCCHH-HHHHHHHcC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 6788899999999999998876 999998754 77899999999999999999999999999988
Q ss_pred hhh
Q 002868 757 INK 759 (872)
Q Consensus 757 ~~~ 759 (872)
.++
T Consensus 125 ga~ 127 (172)
T 3v30_A 125 GAD 127 (172)
T ss_dssp TCC
T ss_pred CCC
Confidence 654
No 27
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.82 E-value=9.4e-20 Score=184.87 Aligned_cols=149 Identities=17% Similarity=0.132 Sum_probs=120.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCC-CCCC---CCCch
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVL---DKPGS 670 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Ga-d~~a---dg~~~ 670 (872)
-.++||+|+..|+.++++.||+.+.+ ++..+..|+||||+|+..|+.+++++||++++ +.+. +|.++
T Consensus 57 g~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 127 (253)
T 1yyh_A 57 GETALHLAARYSRSDAAKRLLEASAD---------ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTP 127 (253)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcH
Confidence 35899999999999999999987632 33446789999999999999999999999986 4442 34444
Q ss_pred hh-------HHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002868 671 RQ-------KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 743 (872)
Q Consensus 671 ~~-------k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~ 743 (872)
.. ..+++..- .+++++|.+|..|.||||+|+..++.+ ++++|++.+ +++|.+|..|.||||+|+.
T Consensus 128 L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 128 LILAARLAVEGMLEDLI-NSHADVNAVDDLGKSALHWAAAVNNVD-AAVVLLKNG------ANKDMQNNREETPLFLAAR 199 (253)
T ss_dssp HHHHHHHTCSSHHHHHH-HTTCCTTCBCTTSCBHHHHHHHHTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHcChHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCCCcCCCCCCHHHHHHH
Confidence 22 22333111 135689999999999999999998876 999998864 7889999999999999999
Q ss_pred cCCHHHHHHHHHhhhhc
Q 002868 744 RAHHSYIHLVQRKINKK 760 (872)
Q Consensus 744 ~Gn~~iveLL~~k~~~~ 760 (872)
+|+.+++++|+++.++.
T Consensus 200 ~~~~~~v~~Ll~~ga~~ 216 (253)
T 1yyh_A 200 EGSYETAKVLLDHFANR 216 (253)
T ss_dssp HTCHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHcCCCc
Confidence 99999999999987653
No 28
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=5.7e-20 Score=166.76 Aligned_cols=116 Identities=18% Similarity=0.111 Sum_probs=99.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
-.++||+|+..|+.++++.||+.+. +++..+..|+||||+|++.|+.++|++||++|++
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 65 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGE---------DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD------------ 65 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTC---------CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC------------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCC---------CcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 3589999999999999999998753 2334467899999999999999999999999864
Q ss_pred HHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002868 675 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 753 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL 753 (872)
+|.+|..|+||||+|+..++.+ ++++|++++ ++++.+|.+|.||||+|. +.++.++|
T Consensus 66 ------------~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~g~t~l~~A~---~~~~~~ll 122 (123)
T 3aaa_C 66 ------------INAPDKHHITPLLSAVYEGHVS-CVKLLLSKG------ADKTVKGPDGLTAFEATD---NQAIKALL 122 (123)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHCC---CHHHHHHH
T ss_pred ------------CCcCCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCCCcCCCCCCHHHHhC---CHHHHHHh
Confidence 6888999999999999998876 999998864 778999999999999994 45555555
No 29
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.82 E-value=3.8e-20 Score=186.93 Aligned_cols=136 Identities=18% Similarity=0.102 Sum_probs=108.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCC----CCchhhhccCCcHHHHHHHcCCHHHHHHHHh---cCCCCCCCC
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGD----HTSSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVLDK 667 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~----as~~~~d~~G~TpLH~AV~~g~~eIVElLL~---~Gad~~adg 667 (872)
-.++||+|+.+|+.+++++||+.+.+.+..... .+....+..|+||||+|+..|+.++|++||+ +|+
T Consensus 90 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga------ 163 (256)
T 2etb_A 90 GHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA------ 163 (256)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC------
Confidence 468999999999999999999986432221000 0000011239999999999999999999999 765
Q ss_pred CchhhHHHHhhhccCccccCCcCCCCCchHHHHHHh--cCChH------HHHHHhhcCCCCCCccccc-------cccCC
Q 002868 668 PGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAAC--RDDAE------NVLDALTDDPGSVGIEAWK-------SAQDS 732 (872)
Q Consensus 668 ~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~--~~~~e------~VVelLL~~p~~Ig~gA~v-------NakD~ 732 (872)
++|.+|..|+||||+|+. .++.+ +++++|+++ ||++ |.+|.
T Consensus 164 ------------------~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~------ga~~~~~~~~~~~~d~ 219 (256)
T 2etb_A 164 ------------------SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM------GARLCPTVQLEEISNH 219 (256)
T ss_dssp ------------------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH------HHHHSTTCCGGGCCCT
T ss_pred ------------------CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc------CCCcccccccccccCC
Confidence 478899999999999998 54432 289999875 4778 99999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhhhhc
Q 002868 733 TGLTPNDYASLRAHHSYIHLVQRKINKK 760 (872)
Q Consensus 733 ~G~TPLHyAa~~Gn~~iveLL~~k~~~~ 760 (872)
.|.||||+|+.+|+.+++++|+++..+.
T Consensus 220 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 220 QGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 9999999999999999999999987653
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.82 E-value=1.4e-19 Score=178.18 Aligned_cols=151 Identities=16% Similarity=0.032 Sum_probs=120.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchh-hhccCCcHHHHHHHcCCHHHHHHHHhcC--CCCCC---CCC
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSE-LAILEMGLLHKAVRRNCRPMVELLLNYA--PDNVL---DKP 668 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~-~d~~G~TpLH~AV~~g~~eIVElLL~~G--ad~~a---dg~ 668 (872)
-.++||+|+..|+.++++.|++.+.+.++ .. .+..|+||||+|+..|+.+++++|+++| ++.+. +|.
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~ 108 (228)
T 2dzn_A 36 GRIPLHWSVSFQAHEITSFLLSKMENVNL-------DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGV 108 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTCTTCCG-------GGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccccccc-------cccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCC
Confidence 35899999999999999999988643332 23 4567999999999999999999999998 65553 344
Q ss_pred chh-------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHH
Q 002868 669 GSR-------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 741 (872)
Q Consensus 669 ~~~-------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyA 741 (872)
++. ...+++..- .+++++|.+|..|.||||+|+..++.+ ++++|++.+ .+++|.+|.+|.||||+|
T Consensus 109 t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g-----~~~~~~~d~~g~t~L~~A 181 (228)
T 2dzn_A 109 TCLHLAVGKKWFEVSQFLI-ENGASVRIKDKFNQIPLHRAASVGSLK-LIELLCGLG-----KSAVNWQDKQGWTPLFHA 181 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHH-HHHHHHTTT-----CCCSCCCCTTSCCHHHHH
T ss_pred CHHHHHHHcCCHhHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHH-HHHHHHhcC-----cccccCcCCCCCCHHHHH
Confidence 442 233444211 125789999999999999999998876 999998764 277899999999999999
Q ss_pred HHcCCHHHHHHHH-Hhhhh
Q 002868 742 SLRAHHSYIHLVQ-RKINK 759 (872)
Q Consensus 742 a~~Gn~~iveLL~-~k~~~ 759 (872)
+..|+.+++++|+ ++.++
T Consensus 182 ~~~~~~~~v~~Ll~~~ga~ 200 (228)
T 2dzn_A 182 LAEGHGDAAVLLVEKYGAE 200 (228)
T ss_dssp HHTTCHHHHHHHHHHHCCC
T ss_pred HHcCCHHHHHHHHHhcCCC
Confidence 9999999999999 66554
No 31
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.82 E-value=6.2e-20 Score=176.46 Aligned_cols=125 Identities=19% Similarity=0.146 Sum_probs=105.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++|+.|+..|+.++++.||+.. +.+.+..+..|+||||+|+..|+.++|++||++|++
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~--------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 64 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNT--------ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR------------- 64 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCT--------TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred HHHHHHHHHcCCHHHHHHHHhcC--------cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-------------
Confidence 46799999999999999999763 123334567899999999999999999999999864
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
+|.+|..|.||||+|+..++.+ ++++|++++ +++|.+|.+|.||||+|+..|+.+++++|++
T Consensus 65 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 126 (179)
T 3f6q_A 65 -----------INVMNRGDDTPLHLAASHGHRD-IVQKLLQYK------ADINAVNEHGNVPLHYACFWGQDQVAEDLVA 126 (179)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 6778888999999999988776 999998754 7789999999999999999999999999988
Q ss_pred hhhh
Q 002868 756 KINK 759 (872)
Q Consensus 756 k~~~ 759 (872)
+.++
T Consensus 127 ~ga~ 130 (179)
T 3f6q_A 127 NGAL 130 (179)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 7654
No 32
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.82 E-value=1.1e-19 Score=179.67 Aligned_cols=148 Identities=16% Similarity=0.070 Sum_probs=120.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR 671 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~ 671 (872)
-.++||+|+..|+.++++.|++.+.+ ++..+..|.||||+|+..|+.++|++|+++|++.+. +|.++.
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 110 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLGVP---------VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPL 110 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC---------SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhCCC---------CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 35899999999999999999987532 334466799999999999999999999999988764 344442
Q ss_pred -------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002868 672 -------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 744 (872)
Q Consensus 672 -------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~ 744 (872)
...+++..- ..++++|.++..|.||||+|+..++.+ ++++|++++ +++|.+|..|.||||+|+.+
T Consensus 111 ~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~ 182 (231)
T 3aji_A 111 HYAASKNRHEIAVMLL-EGGANPDAKDHYDATAMHRAAAKGNLK-MVHILLFYK------ASTNIQDTEGNTPLHLACDE 182 (231)
T ss_dssp HHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHTT------CCSCCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHhcC------CCccccCCCCCCHHHHHHHC
Confidence 223333211 125678999999999999999998876 999998764 77899999999999999999
Q ss_pred CCHHHHHHHHHhhhh
Q 002868 745 AHHSYIHLVQRKINK 759 (872)
Q Consensus 745 Gn~~iveLL~~k~~~ 759 (872)
|+.+++++|+++.++
T Consensus 183 ~~~~~v~~Ll~~ga~ 197 (231)
T 3aji_A 183 ERVEEAKFLVTQGAS 197 (231)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHCCCC
Confidence 999999999988665
No 33
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.82 E-value=1.3e-19 Score=187.83 Aligned_cols=148 Identities=24% Similarity=0.192 Sum_probs=113.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CC----
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KP---- 668 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a-d--g~---- 668 (872)
.++||+|+..|+.++++.||+.+. +++..+..|.||||+|+..|+.++|++||++|++.+. + +.
T Consensus 92 ~t~L~~A~~~g~~~iv~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~ 162 (351)
T 3utm_A 92 LVPLHNACSYGHYEVTELLLKHGA---------CVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVD 162 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHCCCHHHHHHHHHCCC---------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchH
Confidence 478888888888888888887652 2233456788888888888888888888888876542 1 11
Q ss_pred --------------------------------------------------ch----------hhHHHHhhhccCccccCC
Q 002868 669 --------------------------------------------------GS----------RQKQLVDRAGSGFIFKPN 688 (872)
Q Consensus 669 --------------------------------------------------~~----------~~k~lv~~~s~~y~~dvN 688 (872)
++ ....+++..- ..++++|
T Consensus 163 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll-~~g~~~~ 241 (351)
T 3utm_A 163 MAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLL-RKGANVN 241 (351)
T ss_dssp HCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHH-HTTCCTT
T ss_pred HHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHH-HcCCCcC
Confidence 11 1122333211 1256789
Q ss_pred cCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhc
Q 002868 689 VIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKK 760 (872)
Q Consensus 689 a~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~~ 760 (872)
.++..|.||||+|+..++.+ ++++|++.+ +++|.+|..|+||||+|+.+|+.+++++|+++.++.
T Consensus 242 ~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~g------a~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 306 (351)
T 3utm_A 242 EKNKDFMTPLHVAAERAHND-VMEVLHKHG------AKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDP 306 (351)
T ss_dssp CCCTTCCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CcCCCCCCHHHHHHHcCCHH-HHHHHHHCC------CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 99999999999999998876 999998764 788999999999999999999999999999987653
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.82 E-value=1.5e-19 Score=177.79 Aligned_cols=149 Identities=17% Similarity=0.133 Sum_probs=120.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCC-CCCC---CCCch
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVL---DKPGS 670 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Ga-d~~a---dg~~~ 670 (872)
-.++||+|+..|+.++++.||+.+.+ ++..+..|+||||+|+..|+.++|++|+++++ +.+. ++.++
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 95 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLEASAD---------ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTP 95 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCH
T ss_pred CCchHHHHHHcCCHHHHHHHHHcCCC---------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcH
Confidence 45899999999999999999987532 33446779999999999999999999999986 4432 34444
Q ss_pred h-------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002868 671 R-------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 743 (872)
Q Consensus 671 ~-------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~ 743 (872)
. ...+++..- .+++++|.+|..|.||||+|+..++.+ ++++|++++ +++|.+|..|.||||+|+.
T Consensus 96 L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~ 167 (223)
T 2f8y_A 96 LILAARLAVEGMLEDLI-NSHADVNAVDDLGKSALHWAAAVNNVD-AAVVLLKNG------ANKDMQNNREETPLFLAAR 167 (223)
T ss_dssp HHHHHHHTCHHHHHHHH-HTTCCTTCBCTTSCBHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHH-HcCCCCcCcCCCCCcHHHHHHHcCCHH-HHHHHHHcC------CCCCCcCCCCcCHHHHHHH
Confidence 2 233344211 135678999999999999999998876 999998864 7789999999999999999
Q ss_pred cCCHHHHHHHHHhhhhc
Q 002868 744 RAHHSYIHLVQRKINKK 760 (872)
Q Consensus 744 ~Gn~~iveLL~~k~~~~ 760 (872)
+|+.+++++|+++.++.
T Consensus 168 ~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 168 EGSYETAKVLLDHFANR 184 (223)
T ss_dssp HTCHHHHHHHHHTTCCT
T ss_pred cCCHHHHHHHHHcCCCC
Confidence 99999999999986653
No 35
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.82 E-value=6.1e-20 Score=171.62 Aligned_cols=123 Identities=21% Similarity=0.175 Sum_probs=108.0
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002868 594 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 673 (872)
Q Consensus 594 R~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k 673 (872)
|..++||+|+..|..++++.||+. ...+ ++..+..|.||||+ +..|+.++|++|+++|++
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~-~~~~-------~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~----------- 60 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHR-ELVH-------PDALNRFGKTALQV-MMFGSTAIALELLKQGAS----------- 60 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHT-TCCC-------TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-----------
T ss_pred CcchHHHHHHHhCCHHHHHHHHHh-hCcC-------ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-----------
Confidence 346899999999999999999987 3222 33446679999999 999999999999999864
Q ss_pred HHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002868 674 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 753 (872)
Q Consensus 674 ~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL 753 (872)
+|.+|..|.||||+|+..++.+ ++++|++.+ +++|.+|.+|.||||+|+.+|+.+++++|
T Consensus 61 -------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 120 (156)
T 1bd8_A 61 -------------PNVQDTSGTSPVHDAARTGFLD-TLKVLVEHG------ADVNVPDGTGALPIHLAVQEGHTAVVSFL 120 (156)
T ss_dssp -------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCSCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred -------------CCCcCCCCCCHHHHHHHcCcHH-HHHHHHHcC------CCCCCcCCCCCcHHHHHHHhChHHHHHHH
Confidence 6788999999999999998876 999998864 78899999999999999999999999999
Q ss_pred HHh
Q 002868 754 QRK 756 (872)
Q Consensus 754 ~~k 756 (872)
+++
T Consensus 121 l~~ 123 (156)
T 1bd8_A 121 AAE 123 (156)
T ss_dssp HTT
T ss_pred Hhc
Confidence 987
No 36
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.82 E-value=1e-19 Score=176.20 Aligned_cols=146 Identities=15% Similarity=0.083 Sum_probs=114.5
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHH-hcCCCCCC---CCCch-
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLL-NYAPDNVL---DKPGS- 670 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL-~~Gad~~a---dg~~~- 670 (872)
.++||+|+..|+.++++.||+.+.+ ++..+..|.||||+|+..|+.+++++|+ ..+++.+. .|.++
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (201)
T 3hra_A 40 NTPLNIAVHNNDIEIAKALIDRGAD---------INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNAL 110 (201)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHH
Confidence 5899999999999999999987632 3344677999999999999999999999 55555553 24444
Q ss_pred ------hhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCC----hHHHHHHhhcCCCCCCccccccccCCCCCCHHHH
Q 002868 671 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDD----AENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDY 740 (872)
Q Consensus 671 ------~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~----~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHy 740 (872)
....+++..-.....++|.+|..|.||||+|+..++ ..+++++|++.+ +++|.+|.+|.||||+
T Consensus 111 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g------a~~~~~~~~g~t~l~~ 184 (201)
T 3hra_A 111 IPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG------ADQSIKDNSGRTAMDY 184 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT------CCTTCCCTTSCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC------CCCCccCCCCCCHHHH
Confidence 123333321111125789999999999999999876 135999998864 7889999999999999
Q ss_pred HHHcCCHHHHHHHHHh
Q 002868 741 ASLRAHHSYIHLVQRK 756 (872)
Q Consensus 741 Aa~~Gn~~iveLL~~k 756 (872)
|+.+|+.+++++|+++
T Consensus 185 A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 185 ANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHTCHHHHHHHHTC
T ss_pred HHHcCCHhHHHHHHhc
Confidence 9999999999999875
No 37
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.81 E-value=7.3e-20 Score=184.83 Aligned_cols=152 Identities=21% Similarity=0.119 Sum_probs=113.5
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhhcCCcCCC--CCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCc
Q 002868 595 FKWLLEFSMEH---DWCAVVKKLLGILFDGTVDTG--DHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPG 669 (872)
Q Consensus 595 ~~~LLhfAve~---g~~aVvk~LLd~l~~anv~~~--~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~ 669 (872)
-.++||+|+.. |+.+++++||+.+.+.+.-.. .......+..|.||||+|++.|+.++|++||++|++++.....
T Consensus 43 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 122 (256)
T 2etb_A 43 GKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACG 122 (256)
T ss_dssp TBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCS
T ss_pred CCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccc
Confidence 35899999999 999999999999866431100 0011123456999999999999999999999999875421000
Q ss_pred hhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH--cCCH
Q 002868 670 SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL--RAHH 747 (872)
Q Consensus 670 ~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~--~Gn~ 747 (872)
..+..+.+..+..|.||||+|+..++.+ ++++|++.+ ..|+++|.+|.+|+||||+|+. +++.
T Consensus 123 -----------~~~~~~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~~---~~ga~~n~~d~~g~TpLh~A~~~~~~~~ 187 (256)
T 2etb_A 123 -----------RFFQKHQGTCFYFGELPLSLAACTKQWD-VVTYLLENP---HQPASLEATDSLGNTVLHALVMIADNSP 187 (256)
T ss_dssp -----------GGGSCCSSSCCCSCSSHHHHHHHTTCHH-HHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCCSCH
T ss_pred -----------ccccccccccccCCCCHHHHHHHcCCHH-HHHHHHhcc---ccCCCcCccCCCCCCHHHHHHHcccCCc
Confidence 0001122233445999999999998876 999998831 1358899999999999999999 8888
Q ss_pred H-------HHHHHHHhhhhcC
Q 002868 748 S-------YIHLVQRKINKKS 761 (872)
Q Consensus 748 ~-------iveLL~~k~~~~~ 761 (872)
+ ++++|+++.++..
T Consensus 188 ~~~~~~~~iv~~Ll~~ga~~~ 208 (256)
T 2etb_A 188 ENSALVIHMYDGLLQMGARLC 208 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHHcCCCcc
Confidence 8 9999999988763
No 38
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.81 E-value=4.9e-20 Score=191.75 Aligned_cols=160 Identities=19% Similarity=0.071 Sum_probs=93.7
Q ss_pred chHHHHHHHCCCH-HHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch-
Q 002868 596 KWLLEFSMEHDWC-AVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS- 670 (872)
Q Consensus 596 ~~LLhfAve~g~~-aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~- 670 (872)
.++|++|+..+.. .++++|++.+ ++++..+..|+||||+|++.|+.++|++||++|++.+. +|.++
T Consensus 53 ~t~L~~a~~~~~~~~~v~~Ll~~G---------advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l 123 (269)
T 4b93_B 53 CHPLCQCPKCAPAQKRLAKVPASG---------LGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPL 123 (269)
T ss_dssp ----------------------CC---------CCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHHCC---------CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCcc
Confidence 4566666655443 2455555443 22223345566666666666666666666666655542 23332
Q ss_pred ------hhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002868 671 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 744 (872)
Q Consensus 671 ------~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~ 744 (872)
....+++..- .+++++|.+|..|.||||+|+..|+.+ +|++|++.| |++|.+|..|.||||+|+.+
T Consensus 124 ~~a~~~~~~~~~~~Ll-~~g~~~n~~d~~g~TpL~~A~~~g~~~-~v~~Ll~~g------advn~~~~~g~t~Lh~A~~~ 195 (269)
T 4b93_B 124 HLACQQGHFQVVKCLL-DSNAKPNKKDLSGNTPLIYACSGGHHE-LVALLLQHG------ASINASNNKGNTALHEAVIE 195 (269)
T ss_dssp HHHHHHTCHHHHHHHH-HTTCCSCCCCTTCCCHHHHHHHTTCGG-GHHHHHHTT------CCTTCBCTTSCBHHHHHHHT
T ss_pred ccccccChHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCCHH-HHHHHHHCC------CCCCccccCCCcHHHHHHHc
Confidence 1111222110 124568999999999999999998876 999998764 78899999999999999999
Q ss_pred CCHHHHHHHHHhhhhcC--CCCCceeeecC
Q 002868 745 AHHSYIHLVQRKINKKS--SESGRVILDIP 772 (872)
Q Consensus 745 Gn~~iveLL~~k~~~~~--~~~~~v~~~i~ 772 (872)
|+.++|++|+++.++.. ..+|...|++.
T Consensus 196 g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 196 KHVFVVELLLLHGASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCSGGGS
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 99999999999876532 13455556554
No 39
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.81 E-value=4.9e-20 Score=188.20 Aligned_cols=135 Identities=16% Similarity=0.073 Sum_probs=108.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCC-----CCchhhhccCCcHHHHHHHcCCHHHHHHHHh---cCCCCCCC
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGD-----HTSSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVLD 666 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~-----as~~~~d~~G~TpLH~AV~~g~~eIVElLL~---~Gad~~ad 666 (872)
-.++||+|+..|+.+++++||+.+.+.+....+ .+....+..|.||||+|+..|+.++|++||+ +|+
T Consensus 101 g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga----- 175 (273)
T 2pnn_A 101 GQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA----- 175 (273)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC-----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC-----
Confidence 458999999999999999999986432221000 0000011269999999999999999999999 665
Q ss_pred CCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCCh--------HHHHHHhhcCCCCCCcccccc-------ccC
Q 002868 667 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA--------ENVLDALTDDPGSVGIEAWKS-------AQD 731 (872)
Q Consensus 667 g~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~--------e~VVelLL~~p~~Ig~gA~vN-------akD 731 (872)
++|.+|..|+||||+|+..++. .+++++|++. ||++| .+|
T Consensus 176 -------------------d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~------ga~~n~~~~~~~~~d 230 (273)
T 2pnn_A 176 -------------------DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL------GAKLHPTLKLEEITN 230 (273)
T ss_dssp -------------------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCCC
T ss_pred -------------------CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh------hhhcccccccccccC
Confidence 4788999999999999998762 3499999875 47776 599
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 732 STGLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 732 ~~G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
.+|.||||+|+.+|+.+++++|+++.++
T Consensus 231 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 231 RKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 9999999999999999999999999884
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.81 E-value=1.1e-19 Score=180.12 Aligned_cols=148 Identities=20% Similarity=0.157 Sum_probs=114.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCC-----C---CC
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV-----L---DK 667 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~-----a---dg 667 (872)
+++||+|+..|+.++++.||+.. +.+++..+..|+||||+|+..|+.++|++||++|++.. . +|
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~--------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g 75 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFE--------GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEG 75 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTT--------CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHhc--------CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCC
Confidence 57999999999999999999751 23344557789999999999999999999999998642 1 34
Q ss_pred Cch-------hhHHHHhhhccCccccCCcCCC-------------CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccc
Q 002868 668 PGS-------RQKQLVDRAGSGFIFKPNVIGP-------------AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWK 727 (872)
Q Consensus 668 ~~~-------~~k~lv~~~s~~y~~dvNa~d~-------------~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~v 727 (872)
.++ ....+++..- .+++++|.++. .|.||||+|+..++.+ ++++|++++ +++
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~ 147 (232)
T 2rfa_A 76 QTALHIAVINQNVNLVRALL-ARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEE-IVRLLIEHG------ADI 147 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHH-HHHHHHHTT------CCT
T ss_pred cCHHHHHHHcCCHHHHHHHH-hCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHH-HHHHHHHCC------CCC
Confidence 444 1233333211 11455666554 7999999999998876 999998764 788
Q ss_pred cccCCCCCCHHHHHHHcCCHHHH----HHHHHhhhh
Q 002868 728 SAQDSTGLTPNDYASLRAHHSYI----HLVQRKINK 759 (872)
Q Consensus 728 NakD~~G~TPLHyAa~~Gn~~iv----eLL~~k~~~ 759 (872)
|.+|.+|.||||+|+.+|+.+++ ++|+++.++
T Consensus 148 ~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 148 RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183 (232)
T ss_dssp TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence 99999999999999999999988 777766554
No 41
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.81 E-value=1.1e-19 Score=188.53 Aligned_cols=149 Identities=17% Similarity=0.048 Sum_probs=106.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHH-----HcCCHHHHHHHHhcCCCCCC---C
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAV-----RRNCRPMVELLLNYAPDNVL---D 666 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV-----~~g~~eIVElLL~~Gad~~a---d 666 (872)
-.++||+|+..|+.++++.||+.+.. +++..+..|.||||+|+ ..++.+++++|+++|.+.+. +
T Consensus 111 g~T~Lh~A~~~g~~~~v~~Ll~~g~~--------~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 182 (276)
T 4hbd_A 111 GNTALHYSVSHANFPVVQQLLDSGVC--------KVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQA 182 (276)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTSCC--------CTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTT
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCC--------cCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCC
Confidence 35899999999999999999988631 12222444556666665 44555566666655544332 1
Q ss_pred CCch-------hhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHH
Q 002868 667 KPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPND 739 (872)
Q Consensus 667 g~~~-------~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLH 739 (872)
|.++ ....+++..- .+++++|.+|..|+||||+|+..++.+ ++++|++. .|+++|.+|.+|.||||
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll-~~gad~n~~d~~G~TpLh~A~~~g~~~-iv~~Ll~~-----~gad~~~~d~~g~TpL~ 255 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALL-ACEADVNVQDDDGSTALMCACEHGHKE-IAGLLLAV-----PSCDISLTDRDGSTALM 255 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHTS-----TTCCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHCCCHH-HHHHHHhc-----CCCCCcCcCCCCCCHHH
Confidence 3332 1222222110 114568999999999999999998876 99999872 25788999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhh
Q 002868 740 YASLRAHHSYIHLVQRKIN 758 (872)
Q Consensus 740 yAa~~Gn~~iveLL~~k~~ 758 (872)
+|+.+|+.+++++|+++.+
T Consensus 256 ~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 256 VALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHHTCHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHhccC
Confidence 9999999999999998864
No 42
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.81 E-value=3e-20 Score=178.66 Aligned_cols=127 Identities=22% Similarity=0.172 Sum_probs=112.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
-.++||+|+..|+.+++++||+.+.+ ++..+..|.||||+|+..|+.++|++||++|++
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 97 (179)
T 3f6q_A 39 GFSPLHWACREGRSAVVEMLIMRGAR---------INVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD------------ 97 (179)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCC---------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 35899999999999999999987632 334467899999999999999999999999864
Q ss_pred HHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002868 675 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 754 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~ 754 (872)
+|.+|..|.||||+|+..++.+ ++++|++++ ++++.+|..|.||||+|+..++.+++++|+
T Consensus 98 ------------~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 98 ------------INAVNEHGNVPLHYACFWGQDQ-VAEDLVANG------ALVSICNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCSSBCCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred ------------CCccCCCCCCHHHHHHHcCCHH-HHHHHHHCC------CCcchhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 6788999999999999998876 999998864 788999999999999999999999999999
Q ss_pred HhhhhcC
Q 002868 755 RKINKKS 761 (872)
Q Consensus 755 ~k~~~~~ 761 (872)
++.++..
T Consensus 159 ~~g~~~~ 165 (179)
T 3f6q_A 159 KMGQNLN 165 (179)
T ss_dssp HTTCCCS
T ss_pred HhhcCcc
Confidence 9877654
No 43
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.81 E-value=6.9e-21 Score=175.51 Aligned_cols=123 Identities=25% Similarity=0.199 Sum_probs=104.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
-.++||+|+..|+.++++.||+.+.+ ++..+..|+||||+|+..|+.+++++||++|++
T Consensus 10 g~t~L~~A~~~~~~~~~~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------ 68 (137)
T 3c5r_A 10 GETLLHIASIKGDIPSVEYLLQNGSD---------PNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL------------ 68 (137)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCC---------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC---------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc------------
Confidence 46899999999999999999987532 334467899999999999999999999999864
Q ss_pred HHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002868 675 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 754 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~ 754 (872)
+|.+|..|.||||+|+..++.+ ++++|++.+ ++++.+|.+|.||||+|+..++.+++++|.
T Consensus 69 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~g~tpl~~A~~~~~~~~l~~l~ 129 (137)
T 3c5r_A 69 ------------VNTTGYQNDSPLHDAAKNGHVD-IVKLLLSYG------ASRNAVNIFGLRPVDYTDDESMKSLLLLPE 129 (137)
T ss_dssp ------------TTCCCGGGCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCGGGGCCCHHHHHHHSCC-
T ss_pred ------------ccCcCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCCCCCCCCCCHHHHHhhccHHHHHhhcc
Confidence 6778889999999999998876 999998754 788999999999999999999888888776
Q ss_pred Hhh
Q 002868 755 RKI 757 (872)
Q Consensus 755 ~k~ 757 (872)
+..
T Consensus 130 ~~~ 132 (137)
T 3c5r_A 130 KNE 132 (137)
T ss_dssp ---
T ss_pred ccc
Confidence 653
No 44
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.81 E-value=2.1e-20 Score=185.30 Aligned_cols=128 Identities=9% Similarity=-0.034 Sum_probs=108.2
Q ss_pred cchHHHHHHHCCCH----HHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCC------HHHHHHHHhcCCCCC
Q 002868 595 FKWLLEFSMEHDWC----AVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC------RPMVELLLNYAPDNV 664 (872)
Q Consensus 595 ~~~LLhfAve~g~~----aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~------~eIVElLL~~Gad~~ 664 (872)
-+++||+|+.+|+. +++++||+.++ +++..+..|+||||+|+..++ .++|++||++|++
T Consensus 38 g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Ga---------dvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-- 106 (186)
T 3t8k_A 38 KSNILYDVLRNNNDEARYKISMFLINKGA---------DIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-- 106 (186)
T ss_dssp TTTHHHHHTTCSCHHHHHHHHHHHHHTTC---------CSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC--
T ss_pred CCCHHHHHHHcCCcchHHHHHHHHHHCCC---------CCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC--
Confidence 35899999999975 48999998763 344557789999999999987 6889999999875
Q ss_pred CCCCchhhHHHHhhhccCccccCCcCCCCCc-hHHHHHHhcCCh----HHHHHHhhc-CCCCCCccccccccCCCCCCHH
Q 002868 665 LDKPGSRQKQLVDRAGSGFIFKPNVIGPAGL-TPLHVAACRDDA----ENVLDALTD-DPGSVGIEAWKSAQDSTGLTPN 738 (872)
Q Consensus 665 adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~-TPLHlAA~~~~~----e~VVelLL~-~p~~Ig~gA~vNakD~~G~TPL 738 (872)
+|++|..|. ||||+|+..+.. .+++++|++ + ||++|.+|..|.|||
T Consensus 107 ----------------------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~------gad~~~~d~~G~TpL 158 (186)
T 3t8k_A 107 ----------------------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS------GLQLLIKDKWGLTAL 158 (186)
T ss_dssp ----------------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST------TCCTTCCCTTSCCHH
T ss_pred ----------------------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc------CCCCcccCCCCCCHH
Confidence 788999999 999999985432 348999987 4 588999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhcC
Q 002868 739 DYASLRAHHSYIHLVQRKINKKS 761 (872)
Q Consensus 739 HyAa~~Gn~~iveLL~~k~~~~~ 761 (872)
|||+..|+.+++++|.+++.+..
T Consensus 159 ~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 159 EFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHHHh
Confidence 99999999999999998876644
No 45
>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.81 E-value=5.9e-22 Score=178.82 Aligned_cols=63 Identities=37% Similarity=0.569 Sum_probs=57.5
Q ss_pred CcccccceEEeeeeccccchhhhhhhcccCcCcccccCCcchHHHHhhhhhhhccCCCCCCccC
Q 002868 2 PRITTGDIRFVICIQRQLKHLWETLCSDSASSVAEFDEGKRSCRRRLAGHNKRRRKTHPDNVVN 65 (872)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~rfcq~c~~~f~~l~~fd~~krscr~~l~~h~~rrr~~~~~~~~~ 65 (872)
-|||+.|++-.+.+.+|+.+||||||+| ||+|+|||+.|||||+||++||+||||+++++...
T Consensus 30 ~rvCe~H~ka~~V~~~G~~~RFCQQCsr-FH~L~eFD~~kRSCR~rL~~hn~RRRk~~~~~~~~ 92 (94)
T 1ul4_A 30 HKVCEVHAKASSVFLSGLNQRFCQQCSR-FHDLQEFDEAKRSCRRRLAGHNERRRKSSGESGPS 92 (94)
T ss_dssp TTCCHHHHTCSCEEETTEEEEECTTTSS-EEETTTCCSSCCSCSTTTTCCCCCCCSCCCC----
T ss_pred hhhhHHHhcCCEEEECChhHHHHHHHhc-cCCHHHhccccchHHHHHHHHHHHhccCCCCcCCC
Confidence 4899999999999999999999999999 99999999999999999999999999999987653
No 46
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.81 E-value=1.2e-19 Score=192.84 Aligned_cols=130 Identities=13% Similarity=0.097 Sum_probs=114.1
Q ss_pred cchHHHHHHHCC--CHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhh
Q 002868 595 FKWLLEFSMEHD--WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 672 (872)
Q Consensus 595 ~~~LLhfAve~g--~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~ 672 (872)
-.++||+|+..| +.+++++||+.+++ ++..+..|+||||+|++.|+.++|++||++|++..
T Consensus 138 g~t~L~~A~~~g~~~~~~v~~Ll~~ga~---------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-------- 200 (364)
T 3ljn_A 138 GQTALHWCVGLGPEYLEMIKILVQLGAS---------PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKS-------- 200 (364)
T ss_dssp CCCHHHHHHHSCGGGHHHHHHHHHHTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSS--------
T ss_pred CCCHHHHHHHcCCchHHHHHHHHHcCCC---------CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccc--------
Confidence 468999999999 99999999988632 33446789999999999999999999999997621
Q ss_pred HHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002868 673 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 752 (872)
Q Consensus 673 k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveL 752 (872)
..++|.+|..|.||||+|+..++.+ +|++|+++ ||++|.+|.+|.||||+|+.+|+.+++++
T Consensus 201 -----------~~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~g~~~~v~~ 262 (364)
T 3ljn_A 201 -----------SLRLDYANKQGNSHLHWAILINWED-VAMRFVEM------GIDVNMEDNEHTVPLYLSVRAAMVLLTKE 262 (364)
T ss_dssp -----------SCCTTCCCTTCCCTTHHHHTTTCHH-HHHHHHTT------TCCTTCCCTTSCCHHHHHHHTCCHHHHHH
T ss_pred -----------cccccccCCCCCcHHHHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHHHhChHHHHHH
Confidence 2358899999999999999998876 99999875 48889999999999999999999999999
Q ss_pred HHHhhhh
Q 002868 753 VQRKINK 759 (872)
Q Consensus 753 L~~k~~~ 759 (872)
|+++.++
T Consensus 263 Ll~~~~~ 269 (364)
T 3ljn_A 263 LLQKTDV 269 (364)
T ss_dssp HHHHSCH
T ss_pred HHHcCCc
Confidence 9998654
No 47
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=2.2e-19 Score=188.31 Aligned_cols=139 Identities=20% Similarity=0.141 Sum_probs=117.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCchhh
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVLDKPGSRQ 672 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~---g~~eIVElLL~~Gad~~adg~~~~~ 672 (872)
-..|+.|+..|..+.++.|+..+.+.+.. ...+..+..|+||||+|++. ++.++|++||++|++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~---~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~---------- 197 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEK---IPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN---------- 197 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSB---CCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC----------
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhh---ccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC----------
Confidence 36899999999999999999876542211 00223356799999999999 999999999999874
Q ss_pred HHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002868 673 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 752 (872)
Q Consensus 673 k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveL 752 (872)
+|.+|..|.||||+|+..|+.+ +|++|+++ ||++|.+|.+|.||||+|+..|+.+++++
T Consensus 198 --------------in~~d~~g~TpLh~A~~~g~~~-~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 256 (278)
T 1dcq_A 198 --------------LDKQTGKGSTALHYCCLTDNAE-CLKLLLRG------KASIEIANESGETPLDIAKRLKHEHCEEL 256 (278)
T ss_dssp --------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred --------------ccccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCccCCCCCHHHHHHHcCCHHHHHH
Confidence 6888999999999999998876 99999885 48889999999999999999999999999
Q ss_pred HHHhhhhcCCCCCceeee
Q 002868 753 VQRKINKKSSESGRVILD 770 (872)
Q Consensus 753 L~~k~~~~~~~~~~v~~~ 770 (872)
|+++.+++. +.|+.+.
T Consensus 257 Ll~~ga~~~--~~~~~v~ 272 (278)
T 1dcq_A 257 LTQALSGRF--NSHVHVE 272 (278)
T ss_dssp HHHHHTTCC--CSSCCCC
T ss_pred HHHcCCCCC--Ccceeee
Confidence 999998877 5555444
No 48
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.80 E-value=1.3e-19 Score=182.96 Aligned_cols=153 Identities=22% Similarity=0.115 Sum_probs=112.7
Q ss_pred cchHHHHHH---HCCCHHHHHHHHHhhhcCCcC--CCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCc
Q 002868 595 FKWLLEFSM---EHDWCAVVKKLLGILFDGTVD--TGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPG 669 (872)
Q Consensus 595 ~~~LLhfAv---e~g~~aVvk~LLd~l~~anv~--~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~ 669 (872)
-+++||+|+ ..|+.++++.||+.+.+.+.. .-.......+..|+||||+|+..|+.++|++||++|++.+.....
T Consensus 46 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 125 (260)
T 3jxi_A 46 GKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARG 125 (260)
T ss_dssp CCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEE
T ss_pred CCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccc
Confidence 458999999 779999999999987542110 000122233557999999999999999999999999875421000
Q ss_pred hhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCC---
Q 002868 670 SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH--- 746 (872)
Q Consensus 670 ~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn--- 746 (872)
. .-...+.+..+..|.||||+|+..++.+ +|++|++.+ ..|+++|.+|.+|+||||+|+..|+
T Consensus 126 ~----------~~~~~~~~~~~~~g~tpL~~A~~~g~~~-~v~~Ll~~~---~~ga~~~~~d~~g~TpLh~A~~~~~~~~ 191 (260)
T 3jxi_A 126 R----------FFQPKDEGGYFYFGELPLSLAACTNQPH-IVHYLTENG---HKQADLRRQDSRGNTVLHALVAIADNTR 191 (260)
T ss_dssp C----------CCSSSCCCCSCCSCSSHHHHHHHTTCHH-HHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCCSSH
T ss_pred c----------ccCcccccccccCCCCHHHHHHHcCCHH-HHHHHHhcc---ccCCCCcccCCCCCcHHHHHHHhccCch
Confidence 0 0000012223368999999999998876 999998831 1458899999999999999999888
Q ss_pred ------HHHHHHHHHhhhhcC
Q 002868 747 ------HSYIHLVQRKINKKS 761 (872)
Q Consensus 747 ------~~iveLL~~k~~~~~ 761 (872)
.+++++|+++.++..
T Consensus 192 ~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 192 ENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhCcccc
Confidence 799999999988753
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.80 E-value=1.8e-19 Score=183.98 Aligned_cols=150 Identities=22% Similarity=0.077 Sum_probs=114.1
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhhcCC-----cCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 002868 595 FKWLLEFSMEH---DWCAVVKKLLGILFDGT-----VDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD 666 (872)
Q Consensus 595 ~~~LLhfAve~---g~~aVvk~LLd~l~~an-----v~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~ad 666 (872)
-.++||+|+.. |+.+++++||+.+.+.+ ++ ......+..|+||||+|++.|+.++|++||++|++.+..
T Consensus 54 g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~---~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 130 (273)
T 2pnn_A 54 GKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN---ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA 130 (273)
T ss_dssp CCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT---CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh---cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc
Confidence 46899999986 99999999999875421 11 111223567999999999999999999999999875421
Q ss_pred CCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCC
Q 002868 667 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 746 (872)
Q Consensus 667 g~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn 746 (872)
.... .. ...+.+..+..|.||||+|+..++.+ ++++|++.+ ..|+++|.+|.+|+||||+|+..|+
T Consensus 131 ~~~~--------~~--~~~~~~~~~~~g~tpL~~A~~~g~~~-~v~~Ll~~~---~~gad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 131 ANGD--------FF--KKTKGRPGFYFGELPLSLAACTNQLA-IVKFLLQNS---WQPADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp BCSG--------GG--SSCSSSCCCCSCBSHHHHHHHTTCHH-HHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred cccc--------cc--ccccccccccCCCCHHHHHHHcCCHH-HHHHHHhcc---cCCCCceeeCCCCCcHHHHHHHccC
Confidence 0000 00 00123344558999999999998876 999998831 1358899999999999999999998
Q ss_pred ---------HHHHHHHHHhhhhcC
Q 002868 747 ---------HSYIHLVQRKINKKS 761 (872)
Q Consensus 747 ---------~~iveLL~~k~~~~~ 761 (872)
.+++++|+++.++..
T Consensus 197 ~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 197 NTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cchhHHHHHHHHHHHHHHhhhhcc
Confidence 799999999987754
No 50
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.80 E-value=1.6e-19 Score=184.34 Aligned_cols=160 Identities=14% Similarity=-0.011 Sum_probs=125.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC--CCCchh-
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL--DKPGSR- 671 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a--dg~~~~- 671 (872)
-.++||+|+..|+.++++.||+.+. +++..+..|.||||+|+..|+.++|++|+++|++.+. +|.++.
T Consensus 36 g~t~L~~A~~~g~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~ 106 (261)
T 2xai_A 36 HVSPLHEACLGGHLSCVKILLKHGA---------QVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIH 106 (261)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCC---------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHH
Confidence 3589999999999999999998753 2334467899999999999999999999999988764 344442
Q ss_pred ------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002868 672 ------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 745 (872)
Q Consensus 672 ------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~G 745 (872)
...+++..- .+++++|.+|..|.||||+|+..++.+ ++++|++.+ +++|. |.+|.||||+|+.+|
T Consensus 107 ~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~-~~~g~t~Lh~A~~~~ 177 (261)
T 2xai_A 107 EAARRGHVECVNSLI-AYGGNIDHKISHLGTPLYLACENQQRA-CVKKLLESG------ADVNQ-GKGQDSPLHAVARTA 177 (261)
T ss_dssp HHHHTTCHHHHHHHH-HTTCCTTCCBTTTBCHHHHHHHTTCHH-HHHHHHHHT------CCTTC-CBTTBCHHHHHHHHT
T ss_pred HHHHcCcHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHhCCHH-HHHHHHHcC------CCCCC-CCCCCChHHHHHHcC
Confidence 233444211 135689999999999999999998876 999998754 67775 899999999999999
Q ss_pred CHHHHHHHHHhhhhcC--CCCCceeeecC
Q 002868 746 HHSYIHLVQRKINKKS--SESGRVILDIP 772 (872)
Q Consensus 746 n~~iveLL~~k~~~~~--~~~~~v~~~i~ 772 (872)
+.+++++|+++.++.. ..+|...+++.
T Consensus 178 ~~~~v~~Ll~~gad~~~~d~~g~tpl~~A 206 (261)
T 2xai_A 178 SEELACLLMDFGADTQAKNAEGKRPVELV 206 (261)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCGGGGS
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCChhhhc
Confidence 9999999999876532 12344444443
No 51
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.80 E-value=2.4e-19 Score=176.28 Aligned_cols=150 Identities=20% Similarity=0.069 Sum_probs=105.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh-
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR- 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~- 671 (872)
.++||+|+..|+.++++.|++... .+.+..+..|.||||+|+..++.+++++|+++|++.+. +|.++.
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~~--------~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 130 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNRA--------TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH 130 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBTT--------SCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC--------CCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHH
Confidence 356677777777777766665431 01222344566777777777777777777766665542 233331
Q ss_pred ------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002868 672 ------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 745 (872)
Q Consensus 672 ------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~G 745 (872)
...+++..- .+++++|.+|..|.||||+|+..++.+ ++++|++++ ++++.+|..|.||||+|+.+|
T Consensus 131 ~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~~~ 202 (223)
T 2f8y_A 131 WAAAVNNVDAAVVLL-KNGANKDMQNNREETPLFLAAREGSYE-TAKVLLDHF------ANRDITDHMDRLPRDIAQERM 202 (223)
T ss_dssp HHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHHTT------CCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHH-HcCCCCCCcCCCCcCHHHHHHHcCCHH-HHHHHHHcC------CCCccccccCCCHHHHHHHhc
Confidence 222233111 114568999999999999999998876 999998864 788999999999999999999
Q ss_pred CHHHHHHHHHhhhhcC
Q 002868 746 HHSYIHLVQRKINKKS 761 (872)
Q Consensus 746 n~~iveLL~~k~~~~~ 761 (872)
+.+++++|+++...+.
T Consensus 203 ~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 203 HHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CHHHHHHHHHTTCSSC
T ss_pred chHHHHHHHHcCCCcc
Confidence 9999999999877644
No 52
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=1.5e-19 Score=156.91 Aligned_cols=92 Identities=32% Similarity=0.329 Sum_probs=83.2
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhh
Q 002868 636 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 715 (872)
Q Consensus 636 ~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL 715 (872)
+|+||||+|++.|+.++|++||++|++ +|.+|..|.||||+|+..++.+ ++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~n~~d~~g~t~L~~A~~~~~~~-~v~~Ll 55 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------------------------VNAKDKNGRTPLHLAARNGHLE-VVKLLL 55 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC------------------------CcccCCCCCCHHHHHHHcCCHH-HHHHHH
Confidence 378999999999999999999999864 6888999999999999998876 999998
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002868 716 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKIN 758 (872)
Q Consensus 716 ~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~ 758 (872)
+.+ +++|.+|.+|+||||+|+..|+.+++++|+++.+
T Consensus 56 ~~g------a~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 56 EAG------ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HcC------CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 764 7889999999999999999999999999998765
No 53
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.80 E-value=2.8e-19 Score=173.07 Aligned_cols=150 Identities=16% Similarity=0.011 Sum_probs=119.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch--
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS-- 670 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~-- 670 (872)
.++||+|+..|..++++.||... +.+++..+..|.||||+|++.|+.++|++||++|++.+. .|.++
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~--------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 77 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDT--------TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYL 77 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCT--------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccHHHHHHHhccHHHHHHHHHcC--------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 37999999999999999999653 123445567899999999999999999999999998774 24444
Q ss_pred -----hhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002868 671 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 745 (872)
Q Consensus 671 -----~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~G 745 (872)
....+++..-...+.++|.++..|.||||+|+..++.+ ++++|++.+ .+++|.+|..|.||||+|+..+
T Consensus 78 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g-----~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 78 YAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHID-NVKLLLEDG-----REDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHH-HHHHHHHHC-----CCCTTCCCTTSCCHHHHHHHSS
T ss_pred HHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHH-HHHHHHHcC-----CCCcCCCCCCCCCHHHHHHHhc
Confidence 22333332211234578899999999999999998876 999998754 2678999999999999999988
Q ss_pred C-----HHHHHHHHHhhhh
Q 002868 746 H-----HSYIHLVQRKINK 759 (872)
Q Consensus 746 n-----~~iveLL~~k~~~ 759 (872)
+ .+++++|+++.++
T Consensus 152 ~~~~~~~~~v~~Ll~~ga~ 170 (201)
T 3hra_A 152 EGNQLYQDIVKLLMENGAD 170 (201)
T ss_dssp CCSHHHHHHHHHHHHTTCC
T ss_pred cchhhHHHHHHHHHHCCCC
Confidence 8 8999999988665
No 54
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.80 E-value=8.6e-20 Score=182.16 Aligned_cols=131 Identities=18% Similarity=0.120 Sum_probs=91.5
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|+.++++.|++.+...... ......+..|.||||+|+..|+.++|++||++|+
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------------- 141 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLH---SILKATNYNGHTCLHLASIHGYLGIVELLVSLGA-------------- 141 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSS---CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC--------------
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHH---HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC--------------
Confidence 35666666666666666666554221110 0111223446666666666666666666666654
Q ss_pred HhhhccCccccCCcCCC-CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 754 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~-~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~ 754 (872)
++|.++. .|.||||+|+..++.+ ++++|+++ ||++|.+|..|.||||+|+.+|+.+++++|+
T Consensus 142 ----------~~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll 204 (236)
T 1ikn_D 142 ----------DVNAQEPCNGRTALHLAVDLQNPD-LVSLLLKC------GADVNRVTYQGYSPYQLTWGRPSTRIQQQLG 204 (236)
T ss_dssp ----------CTTCCCTTTCCCHHHHHHHTTCHH-HHHHHHTT------TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHH
T ss_pred ----------CCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCcccCCCCCHHHHHHccCchHHHHHHH
Confidence 4677777 8999999999998776 99999875 4788999999999999999999999999999
Q ss_pred Hhhhhc
Q 002868 755 RKINKK 760 (872)
Q Consensus 755 ~k~~~~ 760 (872)
++.++.
T Consensus 205 ~~ga~~ 210 (236)
T 1ikn_D 205 QLTLEN 210 (236)
T ss_dssp TTSCGG
T ss_pred Hcchhh
Confidence 887753
No 55
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.80 E-value=4.8e-19 Score=174.26 Aligned_cols=147 Identities=18% Similarity=0.015 Sum_probs=118.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCC--C----CCCc
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV--L----DKPG 669 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~--a----dg~~ 669 (872)
+++||+|+..|..++++.||+.+.+.. ...+..|.||||+|+..|+.++|++|+++|++.+ . .|.+
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t 74 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLL--------LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWT 74 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCC
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCcccc--------ccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCC
Confidence 479999999999999999998763211 1235679999999999999999999999994432 2 3444
Q ss_pred hh-------hHHHHh-hhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHH
Q 002868 670 SR-------QKQLVD-RAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 741 (872)
Q Consensus 670 ~~-------~k~lv~-~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyA 741 (872)
+. ...+++ ....++..++|.++..|.||||+|+..++.+ ++++|++.+ +++|.+|..|.||||+|
T Consensus 75 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~g------~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 75 PFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE-VSQFLIENG------ASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp HHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHH-HHHHHHHTT------CCSCCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHh-HHHHHHHcC------CCccccCCCCCCHHHHH
Confidence 42 333444 3334334688999999999999999998876 999998764 77899999999999999
Q ss_pred HHcCCHHHHHHHHHhh
Q 002868 742 SLRAHHSYIHLVQRKI 757 (872)
Q Consensus 742 a~~Gn~~iveLL~~k~ 757 (872)
+..|+.+++++|+++.
T Consensus 148 ~~~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLG 163 (228)
T ss_dssp HHTTCHHHHHHHHTTT
T ss_pred HHcCCHHHHHHHHhcC
Confidence 9999999999999876
No 56
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.80 E-value=2.1e-19 Score=177.60 Aligned_cols=147 Identities=18% Similarity=0.069 Sum_probs=121.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh-
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR- 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~- 671 (872)
.++||+|+..|+.++++.|++.+.+ ++..+..|.||||+|++.++.+++++|+++|++.+. .|.++.
T Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 144 (231)
T 3aji_A 74 WSPLHIAASAGXDEIVKALLVKGAH---------VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMH 144 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCHHHHHHHHHHcCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 5899999999999999999987632 334466799999999999999999999999988764 244442
Q ss_pred ------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002868 672 ------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 745 (872)
Q Consensus 672 ------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~G 745 (872)
...+++..- .+++++|.+|..|.||||+|+..++.+ ++++|+++| ++++.+|..|.||||+|+.++
T Consensus 145 ~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~~~ 216 (231)
T 3aji_A 145 RAAAKGNLKMVHILL-FYKASTNIQDTEGNTPLHLACDEERVE-EAKFLVTQG------ASIYIENKEEKTPLQVAKGGL 216 (231)
T ss_dssp HHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCSCCCCTTSCCHHHHSCHHH
T ss_pred HHHHcCCHHHHHHHH-hcCCCccccCCCCCCHHHHHHHCCCHH-HHHHHHHCC------CCCCCCCCCCCCHHHHHHhhH
Confidence 233444211 136789999999999999999998876 999998864 788999999999999999999
Q ss_pred CHHHHHHHHHhhhh
Q 002868 746 HHSYIHLVQRKINK 759 (872)
Q Consensus 746 n~~iveLL~~k~~~ 759 (872)
+.+++++|+++.++
T Consensus 217 ~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 217 GLILKRLAEGEEAS 230 (231)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHcccccc
Confidence 99999999987653
No 57
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=1.3e-19 Score=175.82 Aligned_cols=111 Identities=22% Similarity=0.112 Sum_probs=95.9
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002868 594 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 673 (872)
Q Consensus 594 R~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k 673 (872)
...++||+|+.+|+.++++.||+ + .+ ++..+..|+||||+|+..|+.++|++||++|++
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~--~~-------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----------- 101 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-D--RD-------VDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD----------- 101 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-T--SC-------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-c--CC-------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------
Confidence 34689999999999999999997 3 22 334467899999999999999999999999875
Q ss_pred HHHhhhccCccccCCcCC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002868 674 QLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 745 (872)
Q Consensus 674 ~lv~~~s~~y~~dvNa~d-~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~G 745 (872)
+|.++ ..|+||||+|+..++.+ ++++|+++ |+++|.+|.+|.||||+|+..+
T Consensus 102 -------------~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 102 -------------LDHRDMRGGLTALHMAAGYVRPE-VVEALVEL------GADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp -------------TTCCCSSSSCCHHHHHHHTTCHH-HHHHHHHH------TCCTTCCCTTSCCHHHHHHHHH
T ss_pred -------------CCcCCCCCCCCHHHHHHhcCcHH-HHHHHHHc------CCCCcCCCCCCCCHHHHHHHhc
Confidence 56777 88999999999998876 99999875 4788999999999999998763
No 58
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.80 E-value=1e-19 Score=184.79 Aligned_cols=126 Identities=21% Similarity=0.144 Sum_probs=111.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|..++++.||+.+.+ ++..+..|+||||+|+..|+.++|++||++|++
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~------------- 79 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKEMND---------PSQPNEEGITALHNAICGANYSIVDFLITAGAN------------- 79 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSSC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred hHHHHHHHHcCCHHHHHHHHhcCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------------
Confidence 4799999999999999999987632 334467899999999999999999999999864
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccC-CCCCCHHHHH--HHcCCHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDYA--SLRAHHSYIHL 752 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD-~~G~TPLHyA--a~~Gn~~iveL 752 (872)
+|.+|..|.||||+|+..++.+ ++++|++.+ ++++.+| .+|+||||+| +..|+.+++++
T Consensus 80 -----------~n~~d~~g~tpLh~A~~~g~~~-~v~~Ll~~g------a~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~ 141 (229)
T 2vge_A 80 -----------VNSPDSHGWTPLHCAASCNDTV-ICMALVQHG------AAIFATTLSDGATAFEKCDPYREGYADCATY 141 (229)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHTTT------CCTTCCCSSTTCCTGGGCCTTSTTHHHHHHH
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCcccccCCCCCCHHHHHHHHhcChHHHHHH
Confidence 6888999999999999998876 999998754 7889987 6999999999 99999999999
Q ss_pred HHHhhhhcC
Q 002868 753 VQRKINKKS 761 (872)
Q Consensus 753 L~~k~~~~~ 761 (872)
|+++.++..
T Consensus 142 Ll~~ga~~~ 150 (229)
T 2vge_A 142 LADVEQSMG 150 (229)
T ss_dssp HHHHHHHTT
T ss_pred HHHcCCCcc
Confidence 999877643
No 59
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.80 E-value=5.9e-19 Score=175.06 Aligned_cols=148 Identities=12% Similarity=0.026 Sum_probs=110.2
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch--
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS-- 670 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~-- 670 (872)
.++||+|+..|..++++.|++.+.+ ++..+..|.||||+|+..|+.++|++|+++|++.+. .|.++
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 82 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGAN---------IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLH 82 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC---------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCC---------cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Confidence 5799999999999999999987532 223356788999999999999999999999887653 23333
Q ss_pred -----hhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002868 671 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 745 (872)
Q Consensus 671 -----~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~G 745 (872)
....+++..-.....++|.++..|.||||+|+..++.+ ++++|++.+ ++++.+|.+|.||||+|+.+|
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVD-LVKLLLSKG------SDINIRDNEENICLHWAAFSG 155 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHH-HHHHHHHCC------CCCCccCCCCCCHHHHHHHCC
Confidence 12333332211112567888888889999888887765 888887754 667888888888888888888
Q ss_pred CHHHHHHHHHhhhh
Q 002868 746 HHSYIHLVQRKINK 759 (872)
Q Consensus 746 n~~iveLL~~k~~~ 759 (872)
+.+++++|+++..+
T Consensus 156 ~~~~~~~Ll~~g~~ 169 (237)
T 3b7b_A 156 CVDIAEILLAAKCD 169 (237)
T ss_dssp CHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 88888888877554
No 60
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.79 E-value=6e-20 Score=182.43 Aligned_cols=126 Identities=18% Similarity=0.094 Sum_probs=103.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCchhhHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNY-APDNVLDKPGSRQKQ 674 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~-Gad~~adg~~~~~k~ 674 (872)
.++||+|+.+|+.++++.||+.+. +++..+..|+||||+|+..|+.++|++||++ |+
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~------------- 131 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRV---------GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNI------------- 131 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTC-------------
T ss_pred ccccccccccCcHHHHHHHHhCCC---------CccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCC-------------
Confidence 579999999999999999998653 2334467899999999999999999999998 65
Q ss_pred HHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002868 675 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 754 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~ 754 (872)
++|.+|..|.||||+|+..++.+ ++++|++. ||+++.+|.+|.||||+|+..|+.++++.|+
T Consensus 132 -----------~~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~ 193 (222)
T 3ehr_A 132 -----------ELNQQNKLGDTALHAAAWKGYAD-IVQLLLAK------GARTDLRNIEKKLAFDMATNAACASLLKKKQ 193 (222)
T ss_dssp -----------CCCCCCTTSCCHHHHHHHHTCHH-HHHHHHHH------TCCSCCCCTTSCCHHHHCCSHHHHHHHC---
T ss_pred -----------CccccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCccccCCCCCHHHHhcchhHHHHHHHHh
Confidence 46889999999999999998876 99999875 4788999999999999999999999999888
Q ss_pred HhhhhcC
Q 002868 755 RKINKKS 761 (872)
Q Consensus 755 ~k~~~~~ 761 (872)
.+.+.+.
T Consensus 194 ~~~~~~~ 200 (222)
T 3ehr_A 194 GTDAVRT 200 (222)
T ss_dssp -------
T ss_pred ccchhhh
Confidence 7766543
No 61
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.79 E-value=2e-19 Score=182.40 Aligned_cols=146 Identities=20% Similarity=0.070 Sum_probs=94.7
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh--
Q 002868 597 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR-- 671 (872)
Q Consensus 597 ~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~-- 671 (872)
++||+|+..|+.++++.||+.+. .+.+..+..|.||||+|++.|+.++|++||++|++.+. +|.++.
T Consensus 92 t~L~~A~~~~~~~~v~~Ll~~~~--------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~ 163 (253)
T 1yyh_A 92 TPLHAAVSADAQGVFQILIRNRA--------TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHW 163 (253)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTT--------SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC--------CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 55666666666666665554431 01122234455666666666666666666665555442 233331
Q ss_pred -----hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCC
Q 002868 672 -----QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 746 (872)
Q Consensus 672 -----~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn 746 (872)
...+++..- .+++++|.+|..|.||||+|+..++.+ ++++|++++ |+++.+|..|.||||+|+.+||
T Consensus 164 A~~~~~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~g------a~~~~~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 164 AAAVNNVDAAVVLL-KNGANKDMQNNREETPLFLAAREGSYE-TAKVLLDHF------ANRDITDHMDRLPRDIAQERMH 235 (253)
T ss_dssp HHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHTT------CCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHCCCHH-HHHHHHHcC------CCccccccCCCCHHHHHHHcCC
Confidence 112222110 113468899999999999999998876 999998864 7889999999999999999999
Q ss_pred HHHHHHHHHhhh
Q 002868 747 HSYIHLVQRKIN 758 (872)
Q Consensus 747 ~~iveLL~~k~~ 758 (872)
.+++++|.....
T Consensus 236 ~~i~~~l~~~~~ 247 (253)
T 1yyh_A 236 HDIVRLLDLEHH 247 (253)
T ss_dssp HHHHHHHHC---
T ss_pred HHHHHHHHHHhh
Confidence 999999987643
No 62
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.79 E-value=1.2e-19 Score=183.74 Aligned_cols=126 Identities=21% Similarity=0.154 Sum_probs=110.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|+.++++.||+.+. +++..+..|+||||+|+..|+.++|++||++|++
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~g~---------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------- 95 (239)
T 1ycs_B 38 LALLLDSSLEGEFDLVQRIIYEVD---------DPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN------------- 95 (239)
T ss_dssp HHHHHHHHHHTCHHHHHHHTSTTS---------SCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-------------
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCC---------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 589999999999999999997753 2334467899999999999999999999999864
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCC-CHHHHH--HHcCCHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGL-TPNDYA--SLRAHHSYIHL 752 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~-TPLHyA--a~~Gn~~iveL 752 (872)
+|.+|..|+||||+|+..++.+ ++++|++++ |++|.+|..|. ||||+| +.+|+.+++++
T Consensus 96 -----------~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 96 -----------VNAADSDGWTPLHCAASCNNVQ-VCKFLVESG------AAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred -----------CCccCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCcceecCCCCcchHHHHHHhhhccHHHHHH
Confidence 6888999999999999998876 999998864 78899998887 999999 88999999999
Q ss_pred HHHhhhhcC
Q 002868 753 VQRKINKKS 761 (872)
Q Consensus 753 L~~k~~~~~ 761 (872)
|+.+.++..
T Consensus 158 Ll~~~a~~~ 166 (239)
T 1ycs_B 158 LYGVQEKMG 166 (239)
T ss_dssp HHHHHHHTT
T ss_pred HHHhhhccc
Confidence 999877644
No 63
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.79 E-value=1e-18 Score=183.82 Aligned_cols=150 Identities=21% Similarity=0.133 Sum_probs=112.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhh-ccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCchh
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELA-ILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGSR 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d-~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a-d--g~~~~ 671 (872)
.++||.|+.+|+.++|++||+.+++ ++ ..+ ..|+||||+||+.|+.+||++||++|++.+. + +..+.
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gad--vn-------~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~ 96 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGAN--VN-------FQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPF 96 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCC--TT-------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCC--CC-------ccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchh
Confidence 5899999999999999999998743 32 233 4599999999999999999999999998764 2 22221
Q ss_pred -------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCc----cccccccCCCCCCHHHH
Q 002868 672 -------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGI----EAWKSAQDSTGLTPNDY 740 (872)
Q Consensus 672 -------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~----gA~vNakD~~G~TPLHy 740 (872)
...++... ...+.++|.+|..|.||||+|+..++.+ ++++|+++++.+.. ..+.+..|..|.||||+
T Consensus 97 ~~~~~~~~~~~~~~~-~~~~~~~~~~d~~g~t~l~~A~~~~~~~-~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~ 174 (337)
T 4g8k_A 97 ILAAIAGSVKLLKLF-LSKGADVNECDFYGFTAFMEAAVYGKVK-ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMD 174 (337)
T ss_dssp HHHHHHTCHHHHHHH-HTTTCCTTCBCTTCCBHHHHHHHTTCHH-HHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHH
T ss_pred HHHHhcccchhhHHh-hhccchhhhhccCCCCHHHHHHHcCcHH-HHHHHHHcCCCcchhhccccccccccCCCCcHHHH
Confidence 11111111 1235678999999999999999998876 99999887643321 12233456789999999
Q ss_pred HHHcCCHHHHHHHHHh
Q 002868 741 ASLRAHHSYIHLVQRK 756 (872)
Q Consensus 741 Aa~~Gn~~iveLL~~k 756 (872)
|+.+|+.+++++|+.+
T Consensus 175 A~~~g~~~~v~~LL~~ 190 (337)
T 4g8k_A 175 AAEKGHVEVLKILLDE 190 (337)
T ss_dssp HHHHTCHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhc
Confidence 9999999999999865
No 64
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.79 E-value=7.2e-19 Score=174.05 Aligned_cols=147 Identities=18% Similarity=0.074 Sum_probs=104.6
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCC----CCCC---CCC
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP----DNVL---DKP 668 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Ga----d~~a---dg~ 668 (872)
.++||+|+..|+.++++.|++.+.+ ++..+..|.||||+|+..++.+++++|+++++ +.+. +|.
T Consensus 47 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~ 117 (241)
T 1k1a_A 47 QTPLHLAVITTLPSVVRLLVTAGAS---------PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGL 117 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC---------ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCC
Confidence 4677777777777777777766522 22234567777777777777777777777765 3221 233
Q ss_pred ch-------hhHHHHhhhccCccccCCcCC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHH
Q 002868 669 GS-------RQKQLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDY 740 (872)
Q Consensus 669 ~~-------~~k~lv~~~s~~y~~dvNa~d-~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHy 740 (872)
++ ....+++..- .+++++|.++ ..|.||||+|+..++.+ ++++|++.+ +++|.+|.+|.||||+
T Consensus 118 t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~L~~ 189 (241)
T 1k1a_A 118 TALHVAVNTECQETVQLLL-ERGADIDAVDIKSGRSPLIHAVENNSLS-MVQLLLQHG------ANVNAQMYSGSSALHS 189 (241)
T ss_dssp CHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTTCCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCBCTTSCBHHHH
T ss_pred cHHHHHHHcCCHHHHHHHH-HcCCCcccccccCCCcHHHHHHHcCCHH-HHHHHHHcC------CCCCCcCCCCCCHHHH
Confidence 33 1222333110 1245678887 78999999999998876 999998864 7889999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhh
Q 002868 741 ASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 741 Aa~~Gn~~iveLL~~k~~~ 759 (872)
|+.+|+.+++++|+++.++
T Consensus 190 A~~~~~~~~v~~Ll~~ga~ 208 (241)
T 1k1a_A 190 ASGRGLLPLVRTLVRSGAD 208 (241)
T ss_dssp HHHHTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHhcCCC
Confidence 9999999999999988665
No 65
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.79 E-value=7.9e-19 Score=179.20 Aligned_cols=145 Identities=14% Similarity=0.019 Sum_probs=117.6
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh-
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR- 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~- 671 (872)
.++||+|+..|+.++++.||+.+.+ ++..+..|.||||+|++.|+.++|++||++|++.+. +|.++.
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 74 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWA---------VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLF 74 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC---------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCC---------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 4799999999999999999987532 334467899999999999999999999999998774 345542
Q ss_pred ------hHHHHhh-hccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002868 672 ------QKQLVDR-AGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 744 (872)
Q Consensus 672 ------~k~lv~~-~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~ 744 (872)
..++++. .. ++++++. +..|.||||+|+..++.+ ++++|++.+ +++|.+|.+|.||||+|+.+
T Consensus 75 ~A~~~~~~~~v~~Ll~--~g~~~~~-~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~ 144 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQ--HGASVQP-ESDLASPIHEAARRGHVE-CVNSLIAYG------GNIDHKISHLGTPLYLACEN 144 (261)
T ss_dssp HHHHHTCHHHHHHHHH--TTCCSSC-SCTTCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCBTTTBCHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHH--CCCCCCC-CCCCCCHHHHHHHcCcHH-HHHHHHHcC------CCCCcCCCCCCCHHHHHHHh
Confidence 2333332 21 2445664 456999999999998876 999998864 77899999999999999999
Q ss_pred CCHHHHHHHHHhhhh
Q 002868 745 AHHSYIHLVQRKINK 759 (872)
Q Consensus 745 Gn~~iveLL~~k~~~ 759 (872)
|+.+++++|+++.++
T Consensus 145 ~~~~~v~~Ll~~g~~ 159 (261)
T 2xai_A 145 QQRACVKKLLESGAD 159 (261)
T ss_dssp TCHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999998665
No 66
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.79 E-value=2.2e-19 Score=179.27 Aligned_cols=131 Identities=18% Similarity=0.100 Sum_probs=111.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
-.++||+|+..|+.+++++||+.++ +++..+..|+||||+|++.|+.++|++|+++|++..
T Consensus 45 g~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~---------- 105 (236)
T 1ikn_D 45 QQTPLHLAVITNQPEIAEALLGAGC---------DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPH---------- 105 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHCCCSCCC---------CSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTS----------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC---------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchh----------
Confidence 3589999999999999999997653 333446789999999999999999999999987521
Q ss_pred HHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCC-CCCCHHHHHHHcCCHHHHHHH
Q 002868 675 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYASLRAHHSYIHLV 753 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~-~G~TPLHyAa~~Gn~~iveLL 753 (872)
+...++..+..|.||||+|+..++.+ ++++|++. |+++|.+|. +|.||||+|+..|+.+++++|
T Consensus 106 --------~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 170 (236)
T 1ikn_D 106 --------LHSILKATNYNGHTCLHLASIHGYLG-IVELLVSL------GADVNAQEPCNGRTALHLAVDLQNPDLVSLL 170 (236)
T ss_dssp --------SSCGGGCCCTTCCCHHHHHHHTTCHH-HHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred --------HHHHhhccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 11235778899999999999998876 99999875 478899998 999999999999999999999
Q ss_pred HHhhhh
Q 002868 754 QRKINK 759 (872)
Q Consensus 754 ~~k~~~ 759 (872)
+++.++
T Consensus 171 l~~ga~ 176 (236)
T 1ikn_D 171 LKCGAD 176 (236)
T ss_dssp HTTTCC
T ss_pred HHcCCC
Confidence 998665
No 67
>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.78 E-value=3.4e-21 Score=172.17 Aligned_cols=60 Identities=30% Similarity=0.516 Sum_probs=56.5
Q ss_pred CcccccceEEeeeeccccchhhhhhhcccCcCcccccCCcchHHHHhhhhhhhccCCCCCC
Q 002868 2 PRITTGDIRFVICIQRQLKHLWETLCSDSASSVAEFDEGKRSCRRRLAGHNKRRRKTHPDN 62 (872)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~rfcq~c~~~f~~l~~fd~~krscr~~l~~h~~rrr~~~~~~ 62 (872)
-|||+.|++-.+.+.+|+.+||||||+| ||+|+|||++|||||+||++||+||||+..+.
T Consensus 25 ~rvCe~H~ka~~v~~~G~~~RFCQQC~r-FH~L~eFD~~kRSCR~rL~~hn~RRR~~~~~~ 84 (88)
T 1ul5_A 25 HRVCLRCATASFVVLDGENKRYCQQCGK-FHLLPDFDEGKRSCRRKLERHNNRRKRKPVDK 84 (88)
T ss_dssp GTCCHHHHHHSEEEETTEEEEECTTTSS-EEEGGGBCSSTTSBSSSCCCSSSCCCCCSCSS
T ss_pred ccccHHHcCCCEEEECCEeeHHHHHhcc-ccChhhhccccchHHHHHHHHHHHhccCCccC
Confidence 3899999999999999999999999999 99999999999999999999999999877664
No 68
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.78 E-value=1.4e-18 Score=170.66 Aligned_cols=149 Identities=19% Similarity=0.110 Sum_probs=117.5
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchhh
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSRQ 672 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~~ 672 (872)
.++||+|+..|+.++++.|++.+.+ +...+..|.||||+|+..|+.+++++|+++|++.+. +|.++..
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~ 147 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGAD---------PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLM 147 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCC---------CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHH
Confidence 5899999999999999999987532 333466799999999999999999999999988763 3444422
Q ss_pred HHH--------HhhhccCccccCCcCCC-CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002868 673 KQL--------VDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 743 (872)
Q Consensus 673 k~l--------v~~~s~~y~~dvNa~d~-~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~ 743 (872)
..+ +... ..+++++|..+. .|.||||+|+..++.+ ++++|++. |++++.+|..|.||||+|+.
T Consensus 148 ~a~~~~~~~~~~~~L-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~ 219 (240)
T 3eu9_A 148 WAAYRTHSVDPTRLL-LTFNVSVNLGDKYHKNTALHWAVLAGNTT-VISLLLEA------GANVDAQNIKGESALDLAKQ 219 (240)
T ss_dssp HHHHHCCSSTTHHHH-HHTTCCTTCCCTTTCCCHHHHHHHHTCHH-HHHHHHHH------TCCTTCBCTTSCBHHHHHHH
T ss_pred HHHHhCChHHHHHHH-HhcCCCcchhhccCCCcHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHH
Confidence 222 1111 112567888887 8999999999998876 99999875 47889999999999999999
Q ss_pred cCCHHHHHHHHHhhhhcC
Q 002868 744 RAHHSYIHLVQRKINKKS 761 (872)
Q Consensus 744 ~Gn~~iveLL~~k~~~~~ 761 (872)
+|+.+++++|+++.+++.
T Consensus 220 ~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 220 RKNVWMINHLQEARQAKG 237 (240)
T ss_dssp TTCHHHHHHHHHHC----
T ss_pred cCcHHHHHHHHHhhhccC
Confidence 999999999999877654
No 69
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.78 E-value=3.8e-19 Score=181.46 Aligned_cols=124 Identities=20% Similarity=0.132 Sum_probs=107.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
..++||+|+..|+.++++.||+ + . +++..+..|+||||+|+..|+.++|++||++|++
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~--~-------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------ 102 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-D--R-------DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------------ 102 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-T--C-------CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-C--C-------CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------------
Confidence 4689999999999999999997 3 2 3334567899999999999999999999999875
Q ss_pred HHhhhccCccccCCcCC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHH-----------
Q 002868 675 LVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS----------- 742 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d-~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa----------- 742 (872)
+|.++ ..|.||||+|+..++.+ ++++|+++ ||++|.+|..|.||||+|+
T Consensus 103 ------------~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~ 163 (244)
T 3ui2_A 103 ------------LDHRDMRGGLTALHMAAGYVRPE-VVEALVEL------GADIEVEDERGLTALELAREILKTTPKGNP 163 (244)
T ss_dssp ------------TTCCCSSSCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHHHHTTCCCSSH
T ss_pred ------------CCcCCCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCCCCCCCcHHHHHHHHHhccCCCCH
Confidence 56777 78999999999998876 99999886 4788999999999999998
Q ss_pred -----HcCCHHHHHHHHHhhhh
Q 002868 743 -----LRAHHSYIHLVQRKINK 759 (872)
Q Consensus 743 -----~~Gn~~iveLL~~k~~~ 759 (872)
..|+.+++++|..+..+
T Consensus 164 l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 164 MQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHcChHHHHHHHHHhccc
Confidence 67899999999987544
No 70
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=9.1e-19 Score=181.96 Aligned_cols=147 Identities=15% Similarity=-0.043 Sum_probs=119.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC--CCCchh-
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL--DKPGSR- 671 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a--dg~~~~- 671 (872)
-.++||+|+..|+.++++.||+.+. +++..+..|.||||+|+..|+.++|++|+++|++.+. +|.++.
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~ 162 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGA---------QVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIH 162 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTC---------CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHH
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCC---------CCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHH
Confidence 3589999999999999999998753 2334467899999999999999999999999988764 344442
Q ss_pred ------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002868 672 ------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 745 (872)
Q Consensus 672 ------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~G 745 (872)
...+++..- .+++++|.+|..|.||||+|+..++.+ ++++|++.+ +++|. |..|.||||+|+.+|
T Consensus 163 ~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~-~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 163 EAARRGHVECVNSLI-AYGGNIDHKISHLGTPLYLACENQQRA-CVKKLLESG------ADVNQ-GKGQDSPLHAVVRTA 233 (285)
T ss_dssp HHHHHTCHHHHHHHH-HTTCCTTCCBTTTBCHHHHHHHTTCHH-HHHHHHHTT------CCTTC-CBTTBCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCcHH-HHHHHHHCC------CCCCC-CCCCCCHHHHHHHcC
Confidence 233444211 135688999999999999999998876 999998864 66774 899999999999999
Q ss_pred CHHHHHHHHHhhhh
Q 002868 746 HHSYIHLVQRKINK 759 (872)
Q Consensus 746 n~~iveLL~~k~~~ 759 (872)
+.+++++|+++.++
T Consensus 234 ~~~~v~~Ll~~gad 247 (285)
T 3d9h_A 234 SEELACLLMDFGAD 247 (285)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHCCCC
Confidence 99999999998665
No 71
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.78 E-value=2.4e-18 Score=170.32 Aligned_cols=152 Identities=20% Similarity=0.153 Sum_probs=119.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh-
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR- 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~- 671 (872)
.++||+|+.+|+.++++.|++.+.... .+++..+..|+||||+|+..|+.++|++|+++|++.+. +|.++.
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 84 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGG-----RELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAH 84 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTT-----CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcC-----CCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 589999999999999999998643322 23444567799999999999999999999999988764 244441
Q ss_pred ------hHHHHh-hhcc--CccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccC-CCCCCHHHHH
Q 002868 672 ------QKQLVD-RAGS--GFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDYA 741 (872)
Q Consensus 672 ------~k~lv~-~~s~--~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD-~~G~TPLHyA 741 (872)
...+++ .... ...++++.++..|.||||+|+..++.+ ++++|++.+ ++++.+| ..|.||||+|
T Consensus 85 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~g------~~~~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 85 LACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE-TVQLLLERG------ADIDAVDIKSGRSPLIHA 157 (241)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHTT------CCTTCCCTTTCCCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHH-HHHHHHHcC------CCcccccccCCCcHHHHH
Confidence 222222 1111 112368889999999999999998876 999998864 6778888 8899999999
Q ss_pred HHcCCHHHHHHHHHhhhh
Q 002868 742 SLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 742 a~~Gn~~iveLL~~k~~~ 759 (872)
+.+|+.+++++|+++..+
T Consensus 158 ~~~~~~~~v~~Ll~~g~~ 175 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGAN 175 (241)
T ss_dssp HHTTCHHHHHHHHHTTCC
T ss_pred HHcCCHHHHHHHHHcCCC
Confidence 999999999999988654
No 72
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.78 E-value=7e-19 Score=189.83 Aligned_cols=153 Identities=17% Similarity=0.081 Sum_probs=117.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcC---CHHHHHHHHhcCCCCCC------
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRN---CRPMVELLLNYAPDNVL------ 665 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g---~~eIVElLL~~Gad~~a------ 665 (872)
-.++||+|+..|+.++++.||+.+.. +.+++..+..|.||||+|+..+ +.++|++|+++|++.+.
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~~~~------~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 272 (373)
T 2fo1_E 199 ERSALHQAAANRDFGMMVYMLNSTKL------KGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 272 (373)
T ss_dssp CCCHHHHHHHTTCHHHHHHHTTSHHH------HHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGT
T ss_pred CCCHHHHHHHCCCHHHHHHHHhcCcc------ccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccccc
Confidence 35899999999999999999976510 0122234677999999999998 89999999999988763
Q ss_pred -----CCCch-------hhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCC
Q 002868 666 -----DKPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDST 733 (872)
Q Consensus 666 -----dg~~~-------~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~ 733 (872)
+|.++ ....+++..-...++++|.+|..|.||||+|+..++.+ +|++|+++| |++|.+|..
T Consensus 273 ~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~-iv~~Ll~~g------ad~~~~d~~ 345 (373)
T 2fo1_E 273 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE-VVMYLIQQG------ASVEAVDAT 345 (373)
T ss_dssp SSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHHTT------CCSSCCCSS
T ss_pred CcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCccCCCCC
Confidence 34444 23334442211123688999999999999999998876 999998754 788999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhhhhc
Q 002868 734 GLTPNDYASLRAHHSYIHLVQRKINKK 760 (872)
Q Consensus 734 G~TPLHyAa~~Gn~~iveLL~~k~~~~ 760 (872)
|.||||+|+.+|+.+++++|+++.+++
T Consensus 346 g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 346 DHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 999999999999999999999876654
No 73
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.78 E-value=1.5e-18 Score=172.14 Aligned_cols=147 Identities=17% Similarity=0.033 Sum_probs=108.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcC-CCCCC---CCCch-
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYA-PDNVL---DKPGS- 670 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~G-ad~~a---dg~~~- 670 (872)
.++||+|+..|+.++++.|++.+.+ ++..+..|.||||+|+..|+.+++++|+++| .+.+. .|.++
T Consensus 45 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 115 (237)
T 3b7b_A 45 RTPLMEAAENNHLEAVKYLIKAGAL---------VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPM 115 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCC---------CCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHH
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCC---------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHH
Confidence 4688888888888888888866422 2233556778888888888888888888877 44432 23333
Q ss_pred ------hhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002868 671 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 744 (872)
Q Consensus 671 ------~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~ 744 (872)
....+++..- .+++++|.++..|.||||+|+..++.+ ++++|++.+ +++|.+|..|.||||+|+.+
T Consensus 116 ~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~g------~~~~~~~~~g~t~L~~A~~~ 187 (237)
T 3b7b_A 116 IWATEYKHVDLVKLLL-SKGSDINIRDNEENICLHWAAFSGCVD-IAEILLAAK------CDLHAVNIHGDSPLHIAARE 187 (237)
T ss_dssp HHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHCCHH-HHHHHHTTT------CCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHH-HCCCCCCccCCCCCCHHHHHHHCCCHH-HHHHHHHcC------CCCCCcCCCCCCHHHHHHHh
Confidence 1222333111 124578899999999999999998876 999998754 77899999999999999999
Q ss_pred CCHHHHHHHHHhhhh
Q 002868 745 AHHSYIHLVQRKINK 759 (872)
Q Consensus 745 Gn~~iveLL~~k~~~ 759 (872)
|+.+++++|+++.++
T Consensus 188 ~~~~~v~~Ll~~gad 202 (237)
T 3b7b_A 188 NRYDCVVLFLSRDSD 202 (237)
T ss_dssp TCHHHHHHHHTTTCC
T ss_pred CCHhHHHHHHHcCCC
Confidence 999999999988664
No 74
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.78 E-value=9.7e-20 Score=189.55 Aligned_cols=140 Identities=19% Similarity=0.074 Sum_probs=95.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh-
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR- 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~- 671 (872)
.++||+|+.+|+.+++++||+.+. ++...+..|.||||+|+..++.+++++||++|++++. +|.+|.
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a---------~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~ 157 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGA---------NAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLI 157 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTC---------CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCC---------CcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 467777777777777777766542 2223344566777777777777777777776666553 233431
Q ss_pred ------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002868 672 ------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 745 (872)
Q Consensus 672 ------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~G 745 (872)
...+++..- .+++++|.++..|.||||+||..|+.+ +|++|+++ ||++|++|.+|+||||+|+.+|
T Consensus 158 ~A~~~g~~~~v~~Ll-~~gadvn~~~~~g~t~Lh~A~~~g~~~-~v~~Ll~~------Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 158 YACSGGHHELVALLL-QHGASINASNNKGNTALHEAVIEKHVF-VVELLLLH------GASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp HHHHTTCGGGHHHHH-HTTCCTTCBCTTSCBHHHHHHHTTCHH-HHHHHHHT------TCCSCCCCTTSCCSGGGSCTTC
T ss_pred HHHHCCCHHHHHHHH-HCCCCCCccccCCCcHHHHHHHcCCHH-HHHHHHHC------CCCCCCcCCCCCCHHHHHHhCC
Confidence 122222110 124578999999999999999998876 99999886 4888999999999999998766
Q ss_pred CHHHHHHHH
Q 002868 746 HHSYIHLVQ 754 (872)
Q Consensus 746 n~~iveLL~ 754 (872)
+ ++++|.
T Consensus 230 ~--i~~lL~ 236 (269)
T 4b93_B 230 K--IMELLQ 236 (269)
T ss_dssp H--HHHHTT
T ss_pred c--HHHHHH
Confidence 4 666664
No 75
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.77 E-value=3.2e-19 Score=189.49 Aligned_cols=147 Identities=18% Similarity=0.101 Sum_probs=113.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCchh---
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-DKPGSR--- 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a-dg~~~~--- 671 (872)
.++||+|+..|+.++++.||+.+. +++..+..|.||||+|+..|+.++|++||++|++.+. +|.++.
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~---------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A 91 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGV---------SPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLA 91 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTC---------CTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC---------CccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHH
Confidence 589999999999999999998753 2334467899999999999999999999999987664 555441
Q ss_pred --------hHHHHhhhccCccccC-----------------CcCCCCCchHHHHHHhcC--ChHHHHHHhhcCCCCCCcc
Q 002868 672 --------QKQLVDRAGSGFIFKP-----------------NVIGPAGLTPLHVAACRD--DAENVLDALTDDPGSVGIE 724 (872)
Q Consensus 672 --------~k~lv~~~s~~y~~dv-----------------Na~d~~G~TPLHlAA~~~--~~e~VVelLL~~p~~Ig~g 724 (872)
.+.|++... ..+.++ |.+|..|.||||+|+..+ +.+ +|++|++. |
T Consensus 92 ~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~-~v~~Ll~~------g 163 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAK-ERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLE-MIKILVQL------G 163 (364)
T ss_dssp HHTTCHHHHHHHHHHHH-HHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHH-HHHHHHHH------T
T ss_pred HHcCCHHHHHHHHHhcc-ccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHH-HHHHHHHc------C
Confidence 222222100 002223 337888999999999987 655 89999775 4
Q ss_pred ccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 725 AWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 725 A~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
+++|.+|..|.||||+|+.+|+.+++++|+++.++
T Consensus 164 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 164 ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPS 198 (364)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSC
T ss_pred CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 77889999999999999999999999999888665
No 76
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.77 E-value=2.1e-18 Score=179.15 Aligned_cols=146 Identities=14% Similarity=0.007 Sum_probs=117.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh-
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR- 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~- 671 (872)
.++||+|+..|..++++.||+.+. +++..+..|+||||+|+..|+.++|++||++|++.+. +|.++.
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~ 130 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGW---------AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLF 130 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTC---------CSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCC---------CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 589999999999999999998753 2334577899999999999999999999999998774 345542
Q ss_pred ------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002868 672 ------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 745 (872)
Q Consensus 672 ------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~G 745 (872)
...+++..- .++++++.. ..|.||||+|+..++.+ ++++|++.+ +++|.+|.+|.||||+|+.+|
T Consensus 131 ~A~~~~~~~~v~~Ll-~~g~~~~~~-~~g~t~L~~A~~~g~~~-~v~~Ll~~g------~~~~~~d~~g~t~L~~A~~~~ 201 (285)
T 3d9h_A 131 NACVSGSWDCVNLLL-QHGASVQPE-SDLASPIHEAARRGHVE-CVNSLIAYG------GNIDHKISHLGTPLYLACENQ 201 (285)
T ss_dssp HHHHHTCHHHHHHHH-HTTCCSSCS-CTTSCHHHHHHHHTCHH-HHHHHHHTT------CCTTCCBTTTBCHHHHHHHTT
T ss_pred HHHHcCHHHHHHHHH-HCCCCCCCC-CCCCCHHHHHHHcCCHH-HHHHHHHCC------CCCCCcCCCCCCHHHHHHHcC
Confidence 233344211 124456654 45999999999998876 999998764 778999999999999999999
Q ss_pred CHHHHHHHHHhhhh
Q 002868 746 HHSYIHLVQRKINK 759 (872)
Q Consensus 746 n~~iveLL~~k~~~ 759 (872)
+.+++++|+++.++
T Consensus 202 ~~~~v~~Ll~~ga~ 215 (285)
T 3d9h_A 202 QRACVKKLLESGAD 215 (285)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHCCCC
Confidence 99999999988554
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.77 E-value=3.6e-19 Score=180.13 Aligned_cols=124 Identities=18% Similarity=0.156 Sum_probs=85.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||.|+..|..++++.||+.+.+.++ +..|.||||.|+..|+.++|++||++|++
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~----------~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------- 62 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVKF----------NPLPLALLLDSSLEGEFDLVQRIIYEVDD------------- 62 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-------------
T ss_pred cccCchhhhhhhHHHHHHHhccCCCccc----------CchhhHHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 5799999999999999999988743221 24588999999999999999999999864
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
+|.+|..|.||||+||..++.+ ++++|+++ |+++|.+|.+|+||||+|+.+|+.+++++|++
T Consensus 63 -----------~~~~d~~g~t~L~~A~~~g~~~-~v~~Ll~~------ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 63 -----------PSLPNDEGITALHNAVCAGHTE-IVKFLVQF------GVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp -----------CCCCCTTSCCHHHHHHHHTCHH-HHHHHHHH------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 6888999999999999998876 99999875 47889999999999999999999999999999
Q ss_pred hhhhc
Q 002868 756 KINKK 760 (872)
Q Consensus 756 k~~~~ 760 (872)
+.++.
T Consensus 125 ~ga~~ 129 (239)
T 1ycs_B 125 SGAAV 129 (239)
T ss_dssp TTCCT
T ss_pred cCCCc
Confidence 87653
No 78
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=2.7e-18 Score=172.48 Aligned_cols=145 Identities=14% Similarity=0.061 Sum_probs=90.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC---------
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD--------- 666 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~ad--------- 666 (872)
.++||+|+..|+.++++.|++.+.+ ++..+..|+||||+|+..|+.+++++|+++|++.+..
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 143 (285)
T 1wdy_A 73 ATPFLLAAIAGSVKLLKLFLSKGAD---------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER 143 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC---------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC---------CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHh
Confidence 4688888888888888888776422 2233556777777777777777777777777665421
Q ss_pred ----CCch-------hhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCCh---HHHHHHhhcCCCCCCccccccccCC
Q 002868 667 ----KPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA---ENVLDALTDDPGSVGIEAWKSAQDS 732 (872)
Q Consensus 667 ----g~~~-------~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~---e~VVelLL~~p~~Ig~gA~vNakD~ 732 (872)
|.++ ....+++..-..+++++|.+|..|.||||+|+..++. .+++++|++.+ +++|.+|.
T Consensus 144 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g------~~~~~~~~ 217 (285)
T 1wdy_A 144 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG------ADVNVRGE 217 (285)
T ss_dssp TTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT------CCSSCCCT
T ss_pred hccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcC------CCCCCcCC
Confidence 2222 1222333222223456667777777777777766551 23667676543 55667777
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHH
Q 002868 733 TGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 733 ~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
+|.||||+|+.+|+.+++++|++
T Consensus 218 ~g~t~L~~A~~~~~~~~v~~Ll~ 240 (285)
T 1wdy_A 218 RGKTPLILAVEKKHLGLVQRLLE 240 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHh
Confidence 77777777777777777776666
No 79
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=2.4e-18 Score=172.85 Aligned_cols=128 Identities=21% Similarity=0.133 Sum_probs=112.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHh-hhcCCcCCCCCCchhhhccCCcHHHHHHHcCC----HHHHHHHHhcCCCCCCCCCc
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGI-LFDGTVDTGDHTSSELAILEMGLLHKAVRRNC----RPMVELLLNYAPDNVLDKPG 669 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~-l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~----~eIVElLL~~Gad~~adg~~ 669 (872)
-.++||+|+.+|+.++++.||+. + .+++..+..|.||||+|+..++ .+++++|+++|++
T Consensus 148 g~t~L~~A~~~~~~~~v~~Ll~~~~---------~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~------- 211 (285)
T 1wdy_A 148 GATALMDAAEKGHVEVLKILLDEMG---------ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD------- 211 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTSC---------CCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHhcC---------CCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC-------
Confidence 35899999999999999999976 3 2344456789999999999999 9999999999864
Q ss_pred hhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHH
Q 002868 670 SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSY 749 (872)
Q Consensus 670 ~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~i 749 (872)
+|.+|..|.||||+|+..++.+ ++++|++. .++++|.+|..|.||||+|+.+|+.++
T Consensus 212 -----------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~-----~g~~~~~~~~~g~t~l~~A~~~~~~~i 268 (285)
T 1wdy_A 212 -----------------VNVRGERGKTPLILAVEKKHLG-LVQRLLEQ-----EHIEINDTDSDGKTALLLAVELKLKKI 268 (285)
T ss_dssp -----------------SSCCCTTSCCHHHHHHHTTCHH-HHHHHHHS-----SSCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred -----------------CCCcCCCCCcHHHHHHHcCCHH-HHHHHHhc-----cCCCccccCCCCCcHHHHHHHcCcHHH
Confidence 6888999999999999998876 99999873 247889999999999999999999999
Q ss_pred HHHHHHhhhhcC
Q 002868 750 IHLVQRKINKKS 761 (872)
Q Consensus 750 veLL~~k~~~~~ 761 (872)
+++|+++.++..
T Consensus 269 ~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 269 AELLCKRGASTD 280 (285)
T ss_dssp HHHHHHHSSCSC
T ss_pred HHHHHHcCCCCC
Confidence 999999988754
No 80
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.77 E-value=1.9e-18 Score=183.30 Aligned_cols=130 Identities=19% Similarity=0.143 Sum_probs=110.1
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCchhhH
Q 002868 597 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVLDKPGSRQK 673 (872)
Q Consensus 597 ~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~---g~~eIVElLL~~Gad~~adg~~~~~k 673 (872)
..|+.|+..|..++++.||+.+.+.+.... ....+..|.||||+||+. ++.++|++||++|++
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~---~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad----------- 218 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLP---GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH----------- 218 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEE---CSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-----------
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCC---CcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-----------
Confidence 579999999999999999977643221000 001356799999999997 899999999999864
Q ss_pred HHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002868 674 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 753 (872)
Q Consensus 674 ~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL 753 (872)
+|.+|..|.||||+|+..++.+ ++++|+++ ||++|++|.+|.||||+|+..|+.+++++|
T Consensus 219 -------------vn~~d~~G~TpLh~A~~~g~~~-~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~~~~~iv~~L 278 (301)
T 2b0o_E 219 -------------LDAKAADGNTALHYAALYNQPD-CLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEELL 278 (301)
T ss_dssp -------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCCSCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred -------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 6888999999999999998876 99999886 478899999999999999999999999999
Q ss_pred HHhhhhc
Q 002868 754 QRKINKK 760 (872)
Q Consensus 754 ~~k~~~~ 760 (872)
+++.++.
T Consensus 279 l~~ga~~ 285 (301)
T 2b0o_E 279 EQAQAGT 285 (301)
T ss_dssp HHHHHHT
T ss_pred HHhcCCC
Confidence 9998863
No 81
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=1.1e-18 Score=196.53 Aligned_cols=131 Identities=19% Similarity=0.145 Sum_probs=110.6
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHH---cCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002868 597 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVR---RNCRPMVELLLNYAPDNVLDKPGSRQK 673 (872)
Q Consensus 597 ~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~---~g~~eIVElLL~~Gad~~adg~~~~~k 673 (872)
..||.|+..|..++++.||+.+.+.+... .....+..|.||||+||+ .|+.++|++||++|++
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~---~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~----------- 199 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPL---PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH----------- 199 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCB---CCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-----------
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCC---CCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-----------
Confidence 57999999999999999998874432211 111225679999999977 9999999999999874
Q ss_pred HHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002868 674 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 753 (872)
Q Consensus 674 ~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL 753 (872)
+|.+|..|+||||+||..|+.+ +|++|+++| |++|++|.+|.||||+|+.+|+.+++++|
T Consensus 200 -------------vn~~d~~g~TpLh~A~~~g~~~-~v~~Ll~~g------a~~~~~d~~g~tpl~~A~~~~~~~~~~~L 259 (497)
T 3lvq_E 200 -------------LDAKAADGNTALHYAALYNQPD-CLKLLLKGR------ALVGTVNEAGETALDIARKKHHKECEELL 259 (497)
T ss_dssp -------------TTCCCSSSCCHHHHHTTTTCHH-HHHHHHHTC------CCCSCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred -------------CCccCCCCCcHHHHHHHcCCHH-HHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 7889999999999999998876 999998864 88999999999999999999999999999
Q ss_pred HHhhhhcC
Q 002868 754 QRKINKKS 761 (872)
Q Consensus 754 ~~k~~~~~ 761 (872)
+++.++..
T Consensus 260 l~~ga~~~ 267 (497)
T 3lvq_E 260 EQAQAGTF 267 (497)
T ss_dssp HHTCC---
T ss_pred HHhCCCCC
Confidence 99988765
No 82
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.77 E-value=9.8e-19 Score=182.02 Aligned_cols=145 Identities=14% Similarity=0.035 Sum_probs=108.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR 671 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~ 671 (872)
-.++||+|+..|+.++++.||+.+.+ ++ . .+|.||||+|++.|+.++|++||++|++.+. .|.++.
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~-------~--~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L 99 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNAGAL--KN-------L--LENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTAL 99 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTGG--GS-------C--CTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCC--CC-------C--CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHH
Confidence 35899999999999999999988643 32 1 1489999999999999999999999998763 244442
Q ss_pred -------hHHHHhhhccCccccCCcCCCCC-chHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCC-CCCCHHHHHH
Q 002868 672 -------QKQLVDRAGSGFIFKPNVIGPAG-LTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYAS 742 (872)
Q Consensus 672 -------~k~lv~~~s~~y~~dvNa~d~~G-~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~-~G~TPLHyAa 742 (872)
...+++..- .+++++|.++..| .||||+|+..++.+ ++++|++++ +++ .|. .|.||||+|+
T Consensus 100 ~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~~t~L~~A~~~~~~~-~v~~Ll~~g------~~~--~~~~~g~t~L~~A~ 169 (285)
T 3kea_A 100 YYAVDSGNMQTVKLFV-KKNWRLMFYGKTGWKTSFYHAVMLNDVS-IVSYFLSEI------PST--FDLAILLSCIHITI 169 (285)
T ss_dssp HHHHHTTCHHHHHHHH-HHCGGGGGCSSSGGGSHHHHHHHTTCHH-HHHHHHTTS------CTT--CCCSTHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHH-hcCCCCCccCCCCCCCHHHHHHHcCCHH-HHHHHHhCC------Ccc--ccccCCccHHHHHH
Confidence 223333211 1256788888888 78888888887765 888888765 222 333 7888888888
Q ss_pred HcCCHHHHHHHHHhhhhc
Q 002868 743 LRAHHSYIHLVQRKINKK 760 (872)
Q Consensus 743 ~~Gn~~iveLL~~k~~~~ 760 (872)
.+|+.+++++|+++.++.
T Consensus 170 ~~g~~~~v~~Ll~~gad~ 187 (285)
T 3kea_A 170 KNGHVDMMILLLDYMTST 187 (285)
T ss_dssp HTTCHHHHHHHHHHHHHT
T ss_pred HcChHHHHHHHHHcCCCC
Confidence 888888888888886653
No 83
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.76 E-value=2.4e-18 Score=178.36 Aligned_cols=125 Identities=24% Similarity=0.137 Sum_probs=109.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||.|+..|+.++++.||... +.+.+..+..|.||||+|+..|+.++|++||++|++
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~--------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------- 83 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPL--------NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD------------- 83 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTT--------TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred chhHHHHHHcCCHHHHHHHHHhc--------CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 57999999999999999998541 223444567899999999999999999999999864
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
+|.+|..|.||||+|+..++.+ ++++|++++ +++|.+|..|.||||+|+.+|+.+++++|++
T Consensus 84 -----------~~~~~~~g~t~L~~A~~~g~~~-iv~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 145 (351)
T 3utm_A 84 -----------VHAKDKGGLVPLHNACSYGHYE-VTELLLKHG------ACVNAMDLWQFTPLHEAASKNRVEVCSLLLS 145 (351)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCccCCCCCcHHHHHHHCCCHH-HHHHHHHCC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 6788999999999999998876 999998864 7789999999999999999999999999999
Q ss_pred hhhh
Q 002868 756 KINK 759 (872)
Q Consensus 756 k~~~ 759 (872)
+..+
T Consensus 146 ~g~~ 149 (351)
T 3utm_A 146 HGAD 149 (351)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 8665
No 84
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=2.7e-18 Score=186.44 Aligned_cols=147 Identities=20% Similarity=0.190 Sum_probs=77.2
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh-
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR- 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~- 671 (872)
.++||+|+..|+.++++.|++.+.+ ++..+..|.||||+|++.|+.++|++|+++|++.+. .|.++.
T Consensus 213 ~t~L~~A~~~~~~~~~~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~ 283 (437)
T 1n11_A 213 YTPLHIAAKQNQVEVARSLLQYGGS---------ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLH 283 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC---------CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHH
Confidence 3556666666666666666655422 112234455666666666666666666666555442 122221
Q ss_pred ------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002868 672 ------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 745 (872)
Q Consensus 672 ------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~G 745 (872)
...+++..- .+++++|.++..|.||||+|+..++.+ +|++|++++ +++|.+|..|.||||+|+.+|
T Consensus 284 ~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~g------ad~n~~~~~g~t~L~~A~~~g 355 (437)
T 1n11_A 284 LVAQEGHVPVADVLI-KHGVMVDATTRMGYTPLHVASHYGNIK-LVKFLLQHQ------ADVNAKTKLGYSPLHQAAQQG 355 (437)
T ss_dssp HHHHHTCHHHHHHHH-HHTCCTTCCCSSCCCHHHHHHHSSCSH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHH-hCCccCCCCCCCCCCHHHHHHHcCcHH-HHHHHHhcC------CCCCCCCCCCCCHHHHHHHCC
Confidence 111222110 013445666666666666666665554 666665532 555666666666666666666
Q ss_pred CHHHHHHHHHhhhh
Q 002868 746 HHSYIHLVQRKINK 759 (872)
Q Consensus 746 n~~iveLL~~k~~~ 759 (872)
+.+++++|+++.++
T Consensus 356 ~~~iv~~Ll~~ga~ 369 (437)
T 1n11_A 356 HTDIVTLLLKNGAS 369 (437)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHCcCC
Confidence 66666666655443
No 85
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.75 E-value=3.3e-18 Score=184.61 Aligned_cols=150 Identities=19% Similarity=0.050 Sum_probs=118.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcC---CCCCC---CCC
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYA---PDNVL---DKP 668 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~G---ad~~a---dg~ 668 (872)
-.++||+|+..|+.+++++||+.+++ ++..+..|.||||+|+..|+.++|++||+++ ++.+. +|.
T Consensus 166 g~TpL~~A~~~g~~~iv~~Ll~~ga~---------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~ 236 (373)
T 2fo1_E 166 ENTPLMLAVLARRRRLVAYLMKAGAD---------PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGM 236 (373)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC---------SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSC
T ss_pred CCCHHHHHHHcChHHHHHHHHHCCCC---------CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCC
Confidence 35899999999999999999987633 3344678999999999999999999999987 55543 344
Q ss_pred chh----------hHHHHhhhccCccccCCc--------CCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcccccccc
Q 002868 669 GSR----------QKQLVDRAGSGFIFKPNV--------IGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQ 730 (872)
Q Consensus 669 ~~~----------~k~lv~~~s~~y~~dvNa--------~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNak 730 (872)
++. ...+++..- .+++++|. +|..|.||||+||..++.+ +|++|++.+ ++++|.+
T Consensus 237 t~L~~A~~~~~~~~~~~v~~Ll-~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~-~v~~Ll~~~-----~~~~n~~ 309 (373)
T 2fo1_E 237 TALMIVAHNEGRDQVASAKLLV-EKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMP-IVKYLVGEK-----GSNKDKQ 309 (373)
T ss_dssp CHHHHHHHSCSTTHHHHHHHHH-HHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHH-HHHHHHHHS-----CCCTTCC
T ss_pred CHHHHHHHhCCcchHHHHHHHH-HCCCCcccccccccCcccccCCCHHHHHHHhCCHH-HHHHHHHhc-----CCCccCc
Confidence 431 333333210 11344554 6779999999999998876 999998753 3788999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhhhhc
Q 002868 731 DSTGLTPNDYASLRAHHSYIHLVQRKINKK 760 (872)
Q Consensus 731 D~~G~TPLHyAa~~Gn~~iveLL~~k~~~~ 760 (872)
|.+|.||||+|+.+|+.+++++|+++.++.
T Consensus 310 d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 339 (373)
T 2fo1_E 310 DEDGKTPIMLAAQEGRIEVVMYLIQQGASV 339 (373)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 999999999999999999999999986653
No 86
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.75 E-value=1e-18 Score=181.95 Aligned_cols=146 Identities=15% Similarity=0.055 Sum_probs=117.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CC-Cchh
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DK-PGSR 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg-~~~~ 671 (872)
.++||+|+..|+.+++++||+.++ +++..+..|+||||+|+..|+.++|++||++|++.+. .| .++.
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga---------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L 133 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGL---------DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSF 133 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCC---------CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHH
Confidence 589999999999999999998763 2334467899999999999999999999999988763 23 3442
Q ss_pred -------hHHHHhh-hccCccccCCcCCC-CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCH-HHHH
Q 002868 672 -------QKQLVDR-AGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTP-NDYA 741 (872)
Q Consensus 672 -------~k~lv~~-~s~~y~~dvNa~d~-~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TP-LHyA 741 (872)
...+++. ... + .+..+. .|.||||+|+..++.+ ++++|+++ |+++|.+|..|+|| ||+|
T Consensus 134 ~~A~~~~~~~~v~~Ll~~--g--~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------gad~n~~~~~g~t~~L~~A 202 (285)
T 3kea_A 134 YHAVMLNDVSIVSYFLSE--I--PSTFDLAILLSCIHITIKNGHVD-MMILLLDY------MTSTNTNNSLLFIPDIKLA 202 (285)
T ss_dssp HHHHHTTCHHHHHHHHTT--S--CTTCCCSTHHHHHHHHHHTTCHH-HHHHHHHH------HHHTCTTCCCBCCTTHHHH
T ss_pred HHHHHcCCHHHHHHHHhC--C--CccccccCCccHHHHHHHcChHH-HHHHHHHc------CCCCCcccCCCCChHHHHH
Confidence 3334442 221 2 222333 8999999999998876 99999874 58899999999998 9999
Q ss_pred HHcCCHHHHHHHHHhhhhcC
Q 002868 742 SLRAHHSYIHLVQRKINKKS 761 (872)
Q Consensus 742 a~~Gn~~iveLL~~k~~~~~ 761 (872)
+.+|+.+++++|+++.++..
T Consensus 203 ~~~~~~~~v~~Ll~~gad~~ 222 (285)
T 3kea_A 203 IDNKDIEMLQALFKYDINIY 222 (285)
T ss_dssp HHHTCHHHHHHHTTSCBCST
T ss_pred HHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999977755
No 87
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.75 E-value=5.3e-18 Score=186.29 Aligned_cols=123 Identities=23% Similarity=0.124 Sum_probs=108.5
Q ss_pred chHHHHHHHC-CCHHHHHHHHHhhhcCCcCCCCCCchhhh--ccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhh
Q 002868 596 KWLLEFSMEH-DWCAVVKKLLGILFDGTVDTGDHTSSELA--ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 672 (872)
Q Consensus 596 ~~LLhfAve~-g~~aVvk~LLd~l~~anv~~~~as~~~~d--~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~ 672 (872)
.++||+|+.. |+.++++.||+.+.+ ++ ..+ ..|.||||+|+..|+.++|++||++|++
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gad--vn-------~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad---------- 260 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGAD--VN-------WVNGGQDNATPLIQATAANSLLACEFLLQNGAN---------- 260 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCC--TT-------CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCC--CC-------ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC----------
Confidence 4699999999 999999999987643 22 223 6799999999999999999999999864
Q ss_pred HHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002868 673 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 752 (872)
Q Consensus 673 k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveL 752 (872)
+|.+|..|.||||+|+..++.+ ++++|++++ |++|++|.+|.||||+|+..|+.+++++
T Consensus 261 --------------vn~~d~~G~TpLh~A~~~g~~~-~v~~LL~~G------ad~~~~d~~G~TpL~~A~~~g~~~iv~l 319 (368)
T 3jue_A 261 --------------VNQADSAGRGPLHHATILGHTG-LACLFLKRG------ADLGARDSEGRDPLTIAMETANADIVTL 319 (368)
T ss_dssp --------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred --------------CCCCCCCCCCHHHHHHHcCcHH-HHHHHHHCc------CCCCCcCCCCCCHHHHHHHCCCHHHHHH
Confidence 6888999999999999998876 999998864 7889999999999999999999999999
Q ss_pred HHHhhh
Q 002868 753 VQRKIN 758 (872)
Q Consensus 753 L~~k~~ 758 (872)
|+....
T Consensus 320 Ll~~~~ 325 (368)
T 3jue_A 320 LRLAKM 325 (368)
T ss_dssp HHHHHC
T ss_pred HHHcCC
Confidence 987653
No 88
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.74 E-value=2.8e-18 Score=175.99 Aligned_cols=121 Identities=22% Similarity=0.177 Sum_probs=107.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+..|+.++++.||+.+.+ ++..+..|.||||+|+..|+.++|++||++|++
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------- 98 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGAD---------INYANVDGLTALHQACIDDNVDMVKFLVENGAN------------- 98 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCC---------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCC---------CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------------
Confidence 5899999999999999999987632 334467799999999999999999999999864
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 755 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~ 755 (872)
+|.+|..|.||||+|+..++.+ ++++|++++ ++++.+|.+|.||||+|+..|+.++++.++.
T Consensus 99 -----------~~~~~~~g~tpL~~A~~~g~~~-~v~~Ll~~g------~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~ 160 (299)
T 1s70_B 99 -----------INQPDNEGWIPLHAAASCGYLD-IAEYLISQG------AHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160 (299)
T ss_dssp -----------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred -----------CCCCCCCCCcHHHHHHHcCCHH-HHHHHHhCC------CCCCCcCCCCCCHHHHHHhcchHHHHHHHHh
Confidence 6788899999999999998876 999998864 7789999999999999999999999987765
Q ss_pred h
Q 002868 756 K 756 (872)
Q Consensus 756 k 756 (872)
+
T Consensus 161 ~ 161 (299)
T 1s70_B 161 R 161 (299)
T ss_dssp H
T ss_pred h
Confidence 4
No 89
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.74 E-value=1.1e-18 Score=185.38 Aligned_cols=133 Identities=18% Similarity=-0.042 Sum_probs=104.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCC---HHHHHHHHhcCCCCCCCCCchh
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC---RPMVELLLNYAPDNVLDKPGSR 671 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~---~eIVElLL~~Gad~~adg~~~~ 671 (872)
-.++||+|+..|+.+++++||+.++ +++..+..|+||||+|++.|+ .++++.||+++.
T Consensus 131 g~TpLh~Aa~~g~~~~v~~Ll~~Ga---------d~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~---------- 191 (327)
T 1sw6_A 131 GNTPLHWLTSIANLELVKHLVKHGS---------NRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY---------- 191 (327)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTC---------CTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG----------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCC---------CCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhh----------
Confidence 3589999999999999999998752 333456778899999999888 678888888752
Q ss_pred hHHHHhhhccCccccCCcCCCCCchHHHHHHh----cCChHHHHHHhhcCCC--------------------CCCc----
Q 002868 672 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAAC----RDDAENVLDALTDDPG--------------------SVGI---- 723 (872)
Q Consensus 672 ~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~----~~~~e~VVelLL~~p~--------------------~Ig~---- 723 (872)
.++|.+|..|+||||+|+. .++.+ ++++|++.+. .+..
T Consensus 192 -------------~~~~~~d~~g~tpLh~A~~~~~~~g~~~-~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~ 257 (327)
T 1sw6_A 192 -------------PCLILEDSMNRTILHHIIITSGMTGCSA-AAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGE 257 (327)
T ss_dssp -------------GGGGEECTTCCCHHHHHHHHHTSTTCHH-HHHHHHHHHHHHHHHGGGCCEEEC--------------
T ss_pred -------------ccccCCCCCCCCHHHHHHHHccccccHH-HHHHHHHHHHHHHhcccchHHHhhhhcccCCccccccc
Confidence 2478899999999999998 66665 9999976421 0000
Q ss_pred ---------------cccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhc
Q 002868 724 ---------------EAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKK 760 (872)
Q Consensus 724 ---------------gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~~ 760 (872)
+.++|.+|.+|+||||+|+.+|+.+++++|+++.++.
T Consensus 258 g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~ 309 (327)
T 1sw6_A 258 RKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP 309 (327)
T ss_dssp --CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCT
T ss_pred CCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 0058999999999999999999999999999987653
No 90
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.74 E-value=7.5e-18 Score=182.99 Aligned_cols=147 Identities=22% Similarity=0.170 Sum_probs=119.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh-
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR- 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~- 671 (872)
.++||+|+..|+.++++.||+.+.+ ++..+..|.||||+|++.|+.++|++|+++|++++. +|.++.
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~---------~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 85 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGAS---------PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLH 85 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC---------SCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 5899999999999999999987633 333466799999999999999999999999998764 344442
Q ss_pred ------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002868 672 ------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 745 (872)
Q Consensus 672 ------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~G 745 (872)
...+++..- .+++++|..+..|.||||+|+..++.+ +++.|++.+ ++++..|..|.||||+|+.+|
T Consensus 86 ~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~~------~~~~~~~~~g~t~L~~A~~~g 157 (437)
T 1n11_A 86 CAARIGHTNMVKLLL-ENNANPNLATTAGHTPLHIAAREGHVE-TVLALLEKE------ASQACMTKKGFTPLHVAAKYG 157 (437)
T ss_dssp HHHHHTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHHTT------CCSCCCCTTSCCHHHHHHHTT
T ss_pred HHHHCCCHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCCHH-HHHHHHhCC------CCCcCCCCCCCCHHHHHHHcC
Confidence 233444211 125678999999999999999998876 999998764 667889999999999999999
Q ss_pred CHHHHHHHHHhhhh
Q 002868 746 HHSYIHLVQRKINK 759 (872)
Q Consensus 746 n~~iveLL~~k~~~ 759 (872)
+.+++++|+++..+
T Consensus 158 ~~~~v~~Ll~~g~~ 171 (437)
T 1n11_A 158 KVRVAELLLERDAH 171 (437)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHhCCCC
Confidence 99999999988654
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.73 E-value=6e-18 Score=155.83 Aligned_cols=97 Identities=28% Similarity=0.269 Sum_probs=87.5
Q ss_pred hhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHH
Q 002868 632 ELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVL 711 (872)
Q Consensus 632 ~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VV 711 (872)
..+..|+||||+|+..|+.++|++||++|++ +|.+|..|.||||+|+..++.+ ++
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~~ 59 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD------------------------PNVKDHAGWTPLHEACNHGHLK-VV 59 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------------------------SCCCCTTSCCHHHHHHHTTCHH-HH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCcCCCCCCCHHHHHHHcCCHH-HH
Confidence 3467899999999999999999999999864 6788899999999999998876 99
Q ss_pred HHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 712 DALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 712 elLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
++|++++ +++|.+|..|.||||+|+..|+.+++++|+++.++
T Consensus 60 ~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 101 (137)
T 3c5r_A 60 ELLLQHK------ALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGAS 101 (137)
T ss_dssp HHHHHTT------CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHcC------CcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9998864 77899999999999999999999999999988654
No 92
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.72 E-value=5e-18 Score=176.20 Aligned_cols=148 Identities=18% Similarity=0.046 Sum_probs=114.2
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCC-CCCC---CCCchh-
Q 002868 597 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVL---DKPGSR- 671 (872)
Q Consensus 597 ~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Ga-d~~a---dg~~~~- 671 (872)
..+|.|+.++..+.++.|++.+.+..++ ..|..|+||||+|++.|+.++|++||++|+ +.+. +|.++.
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n-------~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 150 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVN-------IADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIM 150 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCc-------CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHH
Confidence 4556788888888888888776553333 336789999999999999999999999998 6553 244432
Q ss_pred -----------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHH
Q 002868 672 -----------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDY 740 (872)
Q Consensus 672 -----------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHy 740 (872)
...++...- ..+.+++..+..|.||||+|+..|+.+ +|++|++.| |++|.+|.+|+||||+
T Consensus 151 ~a~~~~~~~~~~~~~v~~Ll-~~g~~~~~~~~~g~tpLh~A~~~g~~~-~v~~Ll~~g------ad~n~~d~~G~TpLh~ 222 (276)
T 4hbd_A 151 LTALATLKTQDDIETVLQLF-RLGNINAKASQAGQTALMLAVSHGRVD-VVKALLACE------ADVNVQDDDGSTALMC 222 (276)
T ss_dssp HGGGCCCCSHHHHHHHHHHH-HHSCTTCCCTTTCCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHH
T ss_pred HHHHHHhhhhhhHHHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHH-HHHHHHhCC------CCCCCCCCCCCCHHHH
Confidence 122222110 113457788889999999999998876 999998864 7889999999999999
Q ss_pred HHHcCCHHHHHHHHH-hhhh
Q 002868 741 ASLRAHHSYIHLVQR-KINK 759 (872)
Q Consensus 741 Aa~~Gn~~iveLL~~-k~~~ 759 (872)
|+.+|+.+++++|++ +.++
T Consensus 223 A~~~g~~~iv~~Ll~~~gad 242 (276)
T 4hbd_A 223 ACEHGHKEIAGLLLAVPSCD 242 (276)
T ss_dssp HHHHTCHHHHHHHHTSTTCC
T ss_pred HHHCCCHHHHHHHHhcCCCC
Confidence 999999999999998 4443
No 93
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.72 E-value=3e-17 Score=160.56 Aligned_cols=113 Identities=27% Similarity=0.216 Sum_probs=93.9
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCchh-------hHHHHh-hhccCccccCCcCCCCCchHHHHHHhcCCh
Q 002868 639 GLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGSR-------QKQLVD-RAGSGFIFKPNVIGPAGLTPLHVAACRDDA 707 (872)
Q Consensus 639 TpLH~AV~~g~~eIVElLL~~Gad~~a---dg~~~~-------~k~lv~-~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~ 707 (872)
+.|+.||++|+.++|++||++|++++. +|.++. ...++. ... .++++|.+|..|+||||+|+..++.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~--~gad~~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLIS--KGADVNAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHh--cccchhhhccCCCCHHHHHHHcCCH
Confidence 579999999999999999999999874 355542 222222 121 2578999999999999999999887
Q ss_pred HHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhc
Q 002868 708 ENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKK 760 (872)
Q Consensus 708 e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~~ 760 (872)
+ +|++|++.+ |++|.+|.+|+||||+|+.+|+.+++++|+++.++.
T Consensus 84 ~-~v~~Ll~~g------advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~ 129 (169)
T 4gpm_A 84 E-VVKLLISKG------ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV 129 (169)
T ss_dssp H-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred H-HHHHHHHCc------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 6 999998864 788999999999999999999999999999986653
No 94
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.71 E-value=6.5e-18 Score=156.07 Aligned_cols=100 Identities=21% Similarity=0.160 Sum_probs=88.7
Q ss_pred CCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCCh
Q 002868 628 HTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA 707 (872)
Q Consensus 628 as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~ 707 (872)
++.+..+..|.||||+|++.|+.++|++||++|++ +|.+|..|.||||+|+. ++.
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~-~~~ 57 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD------------------------PNALNRFGRRPIQVMMM-GSA 57 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTCCTTTTTSTT-SCH
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC------------------------cCCcCCCCCCHHHHHHc-CCH
Confidence 44555677899999999999999999999999864 67888999999999999 877
Q ss_pred HHHHHHhhcCCCCCCccccccccCCC-CCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 708 ENVLDALTDDPGSVGIEAWKSAQDST-GLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 708 e~VVelLL~~p~~Ig~gA~vNakD~~-G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
+ ++++|+++ ++++|.+|.. |.||||+|+.+|+.+++++|+++.++
T Consensus 58 ~-~v~~Ll~~------g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 103 (136)
T 1d9s_A 58 Q-VAELLLLH------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103 (136)
T ss_dssp H-HHHHHHHH------TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCC
T ss_pred H-HHHHHHHC------CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 6 99999875 4788999999 99999999999999999999987654
No 95
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.71 E-value=1.2e-17 Score=149.46 Aligned_cols=95 Identities=29% Similarity=0.327 Sum_probs=86.5
Q ss_pred hccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHH
Q 002868 634 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 713 (872)
Q Consensus 634 d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVel 713 (872)
|..|+||||+|+..|+.+++++||++|++ +|.+|..|.||||+|+..++.+ ++++
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~d~~g~t~L~~A~~~~~~~-~~~~ 60 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGAD------------------------VNARSKDGNTPLHLAAKNGHAE-IVKL 60 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCC------------------------SSCCCSSSCCTTHHHHTTTCHH-HHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCcHH-HHHH
Confidence 66799999999999999999999999864 6788899999999999998876 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 714 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 714 LL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
|++. |++++.+|.+|.||||+|+..|+.+++++|+++.++
T Consensus 61 Ll~~------g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 100 (115)
T 2l6b_A 61 LLAK------GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD 100 (115)
T ss_dssp HTTT------TCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSS
T ss_pred HHHc------CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9775 478899999999999999999999999999988665
No 96
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.71 E-value=5.5e-17 Score=159.25 Aligned_cols=146 Identities=17% Similarity=0.148 Sum_probs=90.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCC----CCCchh
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL----DKPGSR 671 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~a----dg~~~~ 671 (872)
.++|++|+..|..++++.|++.+.+ ++..+..|.||||+|++.|+.++|++|+++|++.+. .+.++.
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYD---------VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPL 80 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHH
T ss_pred chHHHHHHHcCChHHHHHHHHcCCC---------cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChh
Confidence 3689999999999999999987632 333466799999999999999999999999986542 122221
Q ss_pred -------hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002868 672 -------QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 744 (872)
Q Consensus 672 -------~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~ 744 (872)
...+++..- .++++++.++..|.||||+|+..++.+ ++++|++.+ ++++.+|.+|.||||+|+.+
T Consensus 81 ~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~-~~~~Ll~~~------~~~~~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLM-KYGADPSLIDGEGCSCIHLAAQFGHTS-IVAYLIAKG------QDVDMMDQNGMTPLMWAAYR 152 (240)
T ss_dssp HHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCHHH-HHHHHHhcC------CCccccCCCCCcHHHHHHHh
Confidence 111222110 113445555555555555555555443 555555432 44455555555555555544
Q ss_pred CC-HHHHHHHHHhhh
Q 002868 745 AH-HSYIHLVQRKIN 758 (872)
Q Consensus 745 Gn-~~iveLL~~k~~ 758 (872)
++ .+++++|+.+..
T Consensus 153 ~~~~~~~~~L~~~~~ 167 (240)
T 3eu9_A 153 THSVDPTRLLLTFNV 167 (240)
T ss_dssp CCSSTTHHHHHHTTC
T ss_pred CChHHHHHHHHhcCC
Confidence 44 455555555443
No 97
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.71 E-value=6e-18 Score=167.63 Aligned_cols=122 Identities=11% Similarity=-0.044 Sum_probs=100.8
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhh-ccCCcHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCchh
Q 002868 597 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELA-ILEMGLLHKAVRRNCR----PMVELLLNYAPDNVLDKPGSR 671 (872)
Q Consensus 597 ~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d-~~G~TpLH~AV~~g~~----eIVElLL~~Gad~~adg~~~~ 671 (872)
..|+.|+..|+.+.++.++... + +..+ ..|+||||+|+.+++. +||++||++|++
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~----~-------~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad--------- 67 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKG----Y-------EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD--------- 67 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHS----S-------SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC---------
T ss_pred cHHHHHHHcCCHHHHHHHHhcC----c-------ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC---------
Confidence 4688999999999999888653 1 1233 6799999999999985 599999999874
Q ss_pred hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCCh-----HHHHHHhhcCCCCCCccccccccCCCCC-CHHHHHHHcC
Q 002868 672 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA-----ENVLDALTDDPGSVGIEAWKSAQDSTGL-TPNDYASLRA 745 (872)
Q Consensus 672 ~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~-----e~VVelLL~~p~~Ig~gA~vNakD~~G~-TPLHyAa~~G 745 (872)
||.+|..|+||||+|+..++. .+++++|+++ ||++|++|.+|. ||||+|+..+
T Consensus 68 ---------------vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~------Gadin~~d~~g~ttpLh~A~~~~ 126 (186)
T 3t8k_A 68 ---------------IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK------GADITALYKPYKIVVFKNIFNYF 126 (186)
T ss_dssp ---------------SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT------TCCSSSCBGGGTBCTTGGGGGCC
T ss_pred ---------------CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC------CCCCCccCCCcCchHHHHHHHcC
Confidence 788999999999999998752 2489999876 488999999999 9999999944
Q ss_pred -----CHHHHHHHHH-hhhh
Q 002868 746 -----HHSYIHLVQR-KINK 759 (872)
Q Consensus 746 -----n~~iveLL~~-k~~~ 759 (872)
+.+++++|+. +.++
T Consensus 127 ~~~~~~~~iv~~Ll~~~gad 146 (186)
T 3t8k_A 127 VDENEMIPLYKLIFSQSGLQ 146 (186)
T ss_dssp SCHHHHHHHHHHHHTSTTCC
T ss_pred CChhhHHHHHHHHHHhcCCC
Confidence 4568888888 6554
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.70 E-value=3.6e-17 Score=148.28 Aligned_cols=94 Identities=24% Similarity=0.134 Sum_probs=84.1
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHh
Q 002868 635 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 714 (872)
Q Consensus 635 ~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelL 714 (872)
..|.||||+|++.|+.++|++||++|++ +|.+|..|.||||+|+..++.+ ++++|
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~L 59 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGED------------------------VNRTLEGGRKPLHYAADCGQLE-ILEFL 59 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCC------------------------TTSCCTTSSCHHHHHHHTTCHH-HHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC------------------------cCccCCCCCcHHHHHHHcCCHH-HHHHH
Confidence 3578999999999999999999999864 6788899999999999998876 99999
Q ss_pred hcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 715 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 715 L~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
++. |+++|.+|.+|+||||+|+.+|+.+++++|+++.++
T Consensus 60 l~~------g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 98 (123)
T 3aaa_C 60 LLK------GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGAD 98 (123)
T ss_dssp HTT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHc------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 875 478899999999999999999999999999998654
No 99
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=5.5e-17 Score=145.81 Aligned_cols=90 Identities=26% Similarity=0.223 Sum_probs=81.0
Q ss_pred hhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHH
Q 002868 633 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 712 (872)
Q Consensus 633 ~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVe 712 (872)
.+..|.|+||+|+..|+.++|++||++|++ +|.+|..|.||||+|+..++.+ +++
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------i~~~d~~g~tpLh~A~~~~~~~-~v~ 74 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGAD------------------------VAAKDKNGSTPLHLAARNGHLE-VVK 74 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTCCCHHHHHHHTTCHH-HHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCC------------------------CCccCCCCCCHHHHHHHcCCHH-HHH
Confidence 356799999999999999999999999864 6788899999999999998876 999
Q ss_pred HhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002868 713 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 753 (872)
Q Consensus 713 lLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL 753 (872)
+|++++ +++|.+|..|.||||+|+.+|+.+++++|
T Consensus 75 ~Ll~~g------a~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 75 LLLEAG------ADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcC------CCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 998754 78899999999999999999999999987
No 100
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.68 E-value=8.4e-17 Score=148.62 Aligned_cols=94 Identities=24% Similarity=0.262 Sum_probs=85.1
Q ss_pred ccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHh
Q 002868 635 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 714 (872)
Q Consensus 635 ~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelL 714 (872)
..|.||||+||+.|+.++|++||++|++ +|.+|..|.||||+|+..++.+ ++++|
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~L 66 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGAD------------------------VNAKDEYGLTPLYLATAHGHLE-IVEVL 66 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCCHH-HHHHH
Confidence 4588999999999999999999999864 6788899999999999998876 99999
Q ss_pred hcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 715 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 715 L~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
++.+ +++|.+|.+|.||||+|+.+|+.+++++|+++.++
T Consensus 67 l~~g------~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 105 (136)
T 2jab_A 67 LKNG------ADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGAD 105 (136)
T ss_dssp HHTT------CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHcC------CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 8864 77899999999999999999999999999987554
No 101
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.66 E-value=3.6e-16 Score=139.26 Aligned_cols=93 Identities=31% Similarity=0.328 Sum_probs=83.8
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhh
Q 002868 636 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 715 (872)
Q Consensus 636 ~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL 715 (872)
+|+||||+|++.|+.+++++|+++|++ +|.++..|.||||+|+..++.+ ++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll 55 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------------------------VNAKDKNGRTPLHLAARNGHLE-VVKLLL 55 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC------------------------CCCcCCCCCcHHHHHHHcCcHH-HHHHHH
Confidence 488999999999999999999999864 5778889999999999998876 999998
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 716 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 716 ~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
+.+ ++++.+|..|.||||+|+..|+.+++++|+++..+
T Consensus 56 ~~g------~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 93 (126)
T 1n0r_A 56 EAG------ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 93 (126)
T ss_dssp HTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HcC------CCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCC
Confidence 764 67899999999999999999999999999987544
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.65 E-value=2.9e-16 Score=155.83 Aligned_cols=96 Identities=21% Similarity=0.170 Sum_probs=86.8
Q ss_pred hccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHH
Q 002868 634 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 713 (872)
Q Consensus 634 d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVel 713 (872)
+..|.||||+|++.|+.++|++||++|++ +|.+|..|.||||+|+..++.+ +|++
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~ 124 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVG------------------------VNGLDKAGSTALYWACHGGHKD-IVEM 124 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHH-HHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCC------------------------ccccCCCCCCHHHHHHHcCCHH-HHHH
Confidence 45689999999999999999999999864 6788999999999999998876 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 714 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 714 LL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
|++.+ ++++|.+|.+|.||||+|+.+|+.+++++|+++.++
T Consensus 125 Ll~~~-----g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 165 (222)
T 3ehr_A 125 LFTQP-----NIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGAR 165 (222)
T ss_dssp HTTST-----TCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred HHcCC-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 98752 578899999999999999999999999999998665
No 103
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.65 E-value=2.1e-16 Score=160.46 Aligned_cols=96 Identities=22% Similarity=0.209 Sum_probs=86.8
Q ss_pred hccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHH
Q 002868 634 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 713 (872)
Q Consensus 634 d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVel 713 (872)
+..|.||||+|++.|+.++|++||++|++ +|.+|..|.||||+|+..++.+ ++++
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~d~~g~tpLh~A~~~g~~~-~v~~ 72 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKEMND------------------------PSQPNEEGITALHNAICGANYS-IVDF 72 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHHSSC------------------------TTCCCTTSCCHHHHHHHTTCHH-HHHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhcCCC------------------------CCCCCCCCCCHHHHHHHcCCHH-HHHH
Confidence 45688999999999999999999999864 6888999999999999998876 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhc
Q 002868 714 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKK 760 (872)
Q Consensus 714 LL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~~ 760 (872)
|++. |+++|.+|.+|+||||+|+.+|+.+++++|+++.++.
T Consensus 73 Ll~~------ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 113 (229)
T 2vge_A 73 LITA------GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAI 113 (229)
T ss_dssp HHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred HHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 9885 4788999999999999999999999999999886653
No 104
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.65 E-value=7.9e-17 Score=171.11 Aligned_cols=123 Identities=12% Similarity=-0.054 Sum_probs=97.5
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchh-hhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 597 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSE-LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 597 ~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~-~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++|+|+..+..+++++|++.++ +++. .+..|+||||+|++.|+.++|++||++|++
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~---------dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad------------- 156 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQL---------NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN------------- 156 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCC---------CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred chhHHHHHhhHHHHHHHHHhcCC---------CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 45677888777888888886643 3334 477899999999999999999999999874
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCC---hHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH----cCCHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDD---AENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL----RAHHS 748 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~---~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~----~Gn~~ 748 (872)
+|.+|..|+||||+|+..++ .+ +++.|++.+ .+++|.+|.+|+||||+|+. .|+.+
T Consensus 157 -----------~n~~d~~g~TpLh~A~~~g~~~~~~-~~~~ll~~~-----~~~~~~~d~~g~tpLh~A~~~~~~~g~~~ 219 (327)
T 1sw6_A 157 -----------RLYGDNMGESCLVKAVKSVNNYDSG-TFEALLDYL-----YPCLILEDSMNRTILHHIIITSGMTGCSA 219 (327)
T ss_dssp -----------TTBCCTTCCCHHHHHHHSSHHHHTT-CHHHHHHHH-----GGGGGEECTTCCCHHHHHHHHHTSTTCHH
T ss_pred -----------CCCcCCCCCCHHHHHHHhcccccHH-HHHHHHHhh-----hccccCCCCCCCCHHHHHHHHccccccHH
Confidence 68899999999999999875 23 555555432 25789999999999999999 89999
Q ss_pred HHHHHHHhhh
Q 002868 749 YIHLVQRKIN 758 (872)
Q Consensus 749 iveLL~~k~~ 758 (872)
++++|+++..
T Consensus 220 ~v~~Ll~~~~ 229 (327)
T 1sw6_A 220 AAKYYLDILM 229 (327)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998754
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.63 E-value=6.8e-16 Score=133.83 Aligned_cols=89 Identities=29% Similarity=0.266 Sum_probs=78.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
+++||+|+..|+.++++.|++.+. +++..+..|+||||+|+..|+.++|++||++|++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~---------~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------- 60 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGA---------DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------- 60 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCC---------CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 479999999999999999998753 3334577899999999999999999999999864
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 718 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p 718 (872)
+|.+|..|+||||+|+..++.+ ++++|+++|
T Consensus 61 -----------~~~~d~~g~t~l~~A~~~~~~~-~~~~Ll~~g 91 (93)
T 1n0q_A 61 -----------VNAKDKNGRTPLHLAARNGHLE-VVKLLLEAG 91 (93)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT
T ss_pred -----------CCccCCCCCCHHHHHHHcCCHH-HHHHHHHcC
Confidence 6788999999999999998876 999998865
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.63 E-value=2.4e-16 Score=140.86 Aligned_cols=104 Identities=23% Similarity=0.143 Sum_probs=88.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
-+++||+|+..|..++++.||+.+. +++..+..|.||||+|+..++.++|++||++|++
T Consensus 9 g~t~L~~A~~~~~~~~~~~Ll~~g~---------~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------ 67 (115)
T 2l6b_A 9 GNTPLHNAAKNGHAEEVKKLLSKGA---------DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD------------ 67 (115)
T ss_dssp SCCHHHHHHHHTCHHHHHHHTTTTC---------CSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC---------CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------------
Confidence 3589999999999999999997753 2334467899999999999999999999999864
Q ss_pred HHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHH
Q 002868 675 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPN 738 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPL 738 (872)
+|.+|..|.||||+|+..++.+ ++++|+++ ||++|.+|..|.||-
T Consensus 68 ------------~~~~d~~g~tpl~~A~~~~~~~-~~~~Ll~~------ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 68 ------------VNARSKDGNTPEHLAKKNGHHE-IVKLLDAK------GADVNARSWGSSHHH 112 (115)
T ss_dssp ------------TTCCCTTCCCTTHHHHTTTCHH-HHHHHHTT------SSSHHHHSCCCC---
T ss_pred ------------CcccCCCCCCHHHHHHHCCCHH-HHHHHHHc------CCCCCcCCccccccc
Confidence 6788899999999999998776 99999875 488999999999984
No 107
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.63 E-value=3.2e-16 Score=147.99 Aligned_cols=94 Identities=22% Similarity=0.206 Sum_probs=83.4
Q ss_pred hccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHH
Q 002868 634 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 713 (872)
Q Consensus 634 d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVel 713 (872)
+..|.||||+|++.|+.++|++||++|++ +|.+|..|.||||+|+ .++.+ ++++
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~-~~~~~-~v~~ 62 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN------------------------PNAPNSYGRRPIQVMM-MGSAR-VAEL 62 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC------------------------TTCCCSSSCCTTTSSC-TTCHH-HHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCCCCCCCCHHHHHH-cCCHH-HHHH
Confidence 56799999999999999999999999864 6788899999999985 66665 9999
Q ss_pred hhcCCCCCCccccccccCCCCCC-HHHHHHHcCCHHHHHHHHHhhhh
Q 002868 714 LTDDPGSVGIEAWKSAQDSTGLT-PNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 714 LL~~p~~Ig~gA~vNakD~~G~T-PLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
|++. |+++|.+|..|.| |||+|+.+|+.+++++|+++.++
T Consensus 63 Ll~~------g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~ 103 (156)
T 1bi7_B 63 LLLH------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103 (156)
T ss_dssp HHTT------TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred HHHc------CCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9875 4788999999999 99999999999999999998654
No 108
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.63 E-value=5.5e-16 Score=150.33 Aligned_cols=95 Identities=17% Similarity=0.098 Sum_probs=85.2
Q ss_pred hhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHH
Q 002868 633 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 712 (872)
Q Consensus 633 ~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVe 712 (872)
.+..|.||||+|++.|+.++|++||+ |++ +|.+|..|+||||+|+..++.+ +++
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------------~~~~d~~g~t~L~~A~~~~~~~-~v~ 93 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRD------------------------VDAVDENGRTALLFVAGLGSDK-CVR 93 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCC------------------------CCCcCCCCCCHHHHHHHcCCHH-HHH
Confidence 34568999999999999999999999 753 6888999999999999998876 999
Q ss_pred HhhcCCCCCCccccccccC-CCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 713 ALTDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 713 lLL~~p~~Ig~gA~vNakD-~~G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
+|++.+ +++|.+| .+|+||||+|+.+|+.+++++|+++.++
T Consensus 94 ~Ll~~g------a~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 135 (183)
T 3deo_A 94 LLAEAG------ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD 135 (183)
T ss_dssp HHHHTT------CCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHcC------CCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC
Confidence 998864 7889998 8999999999999999999999998654
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.62 E-value=5.5e-17 Score=178.54 Aligned_cols=128 Identities=13% Similarity=0.106 Sum_probs=95.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
+++||+|+..|+.++++.||+.+.... .....+..|.||||+|+++|+.++|++||++|++..
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~------~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~----------- 155 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDE------IVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI----------- 155 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCS------SCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTH-----------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHH------HHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-----------
Confidence 599999999999999999998763210 011223457899999999999999999999997521
Q ss_pred HhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccc--cCCCCCCHHHHHH-HcCCHHHHHH
Q 002868 676 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSA--QDSTGLTPNDYAS-LRAHHSYIHL 752 (872)
Q Consensus 676 v~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNa--kD~~G~TPLHyAa-~~Gn~~iveL 752 (872)
..+++.++ .||||+||..|+.+ +|++|++++ ++++. +|.+|.||||+|+ .+||.+++++
T Consensus 156 --------~~~i~~~~---~TpLh~Aa~~G~~e-iv~~Ll~~g------a~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~ 217 (376)
T 2aja_A 156 --------MAMIQAEN---YHAFRLAAENGHLH-VLNRLCELA------PTEATAMIQAENYYAFRWAAVGRGHHNVINF 217 (376)
T ss_dssp --------HHHHSHHH---HHHHHHHHHTTCHH-HHHHHHHSC------GGGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred --------ccccCCCC---CCHHHHHHHCCCHH-HHHHHHHcC------CccchhccCCCCCCHHHHHHHHCCCHHHHHH
Confidence 01123333 88888888888776 888887754 66666 7888888888888 8888888888
Q ss_pred HHHhhh
Q 002868 753 VQRKIN 758 (872)
Q Consensus 753 L~~k~~ 758 (872)
|+++.+
T Consensus 218 Ll~~ga 223 (376)
T 2aja_A 218 LLDCPV 223 (376)
T ss_dssp HTTSHH
T ss_pred HHhCCC
Confidence 887543
No 110
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.61 E-value=3.2e-16 Score=166.26 Aligned_cols=107 Identities=19% Similarity=0.041 Sum_probs=85.2
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchh
Q 002868 595 FKWLLEFSMEH---DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 671 (872)
Q Consensus 595 ~~~LLhfAve~---g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~ 671 (872)
-.++||+|+.. |..+++++||+.+. + ++..|..|+||||+|++.|+.++|++||++|++
T Consensus 190 g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga--d-------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad--------- 251 (301)
T 2b0o_E 190 EELVLHLAVKVANQASLPLVDFIIQNGG--H-------LDAKAADGNTALHYAALYNQPDCLKLLLKGRAL--------- 251 (301)
T ss_dssp EECHHHHHHHTCCTTTHHHHHHHHHHSS--C-------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred CccHHHHHHHhcccCcHHHHHHHHhcCC--C-------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 46899999987 89999999998863 2 334467899999999999999999999999875
Q ss_pred hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCH
Q 002868 672 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHH 747 (872)
Q Consensus 672 ~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~ 747 (872)
+|.+|..|.||||+|+..++.+ ++++|++.+ ++ .|.||||+|+..|+.
T Consensus 252 ---------------~~~~d~~G~TpL~~A~~~~~~~-iv~~Ll~~g------a~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 252 ---------------VGTVNEAGETALDIARKKHHKE-CEELLEQAQ------AG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ---------------CSCCCTTSCCHHHHHHHHTCHH-HHHHHHHHH------HH------TTSSCCC--------
T ss_pred ---------------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHhc------CC------CCCChhHHHHhcCCc
Confidence 6889999999999999998876 999998743 32 689999999998874
No 111
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.59 E-value=1.4e-15 Score=155.01 Aligned_cols=94 Identities=17% Similarity=0.092 Sum_probs=84.8
Q ss_pred hccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHH
Q 002868 634 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 713 (872)
Q Consensus 634 d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVel 713 (872)
+..|.||||+|++.|+.++|++||+ |++ +|.+|..|+||||+|+..++.+ +|++
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------------~~~~d~~g~t~L~~A~~~g~~~-~v~~ 95 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRD------------------------VDAVDENGRTALLFVAGLGSDK-CVRL 95 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCC------------------------TTCBCTTSCBHHHHHHHHTCHH-HHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCC------------------------CCCcCCCCCCHHHHHHHCCCHH-HHHH
Confidence 4568999999999999999999999 754 6888999999999999998876 9999
Q ss_pred hhcCCCCCCccccccccC-CCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 714 LTDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 714 LL~~p~~Ig~gA~vNakD-~~G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
|++++ +++|.+| .+|+||||+|+.+|+.+++++|+++.++
T Consensus 96 Ll~~g------a~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 136 (244)
T 3ui2_A 96 LAEAG------ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD 136 (244)
T ss_dssp HHHTT------CCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHcC------CCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 98864 7889998 8899999999999999999999998665
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.54 E-value=5.1e-16 Score=170.87 Aligned_cols=120 Identities=15% Similarity=0.097 Sum_probs=97.6
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002868 596 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 675 (872)
Q Consensus 596 ~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~l 675 (872)
.++||+|+.+|+.+++++|++.+.+... .+.. +.+ .||||+|+++|+.++|++||++|++
T Consensus 129 ~tpL~~Aa~~G~~eiv~~Ll~~gad~~~----~~i~--~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~------------- 188 (376)
T 2aja_A 129 YQAFRLAAENGHLHVLNRLCELAPTEIM----AMIQ--AEN-YHAFRLAAENGHLHVLNRLCELAPT------------- 188 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCTTTHH----HHHS--HHH-HHHHHHHHHTTCHHHHHHHHHSCGG-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCccc----cccC--CCC-CCHHHHHHHCCCHHHHHHHHHcCCc-------------
Confidence 5799999999999999999987632000 0111 222 8999999999999999999999864
Q ss_pred HhhhccCccccCCc--CCCCCchHHHHHH-hcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002868 676 VDRAGSGFIFKPNV--IGPAGLTPLHVAA-CRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 752 (872)
Q Consensus 676 v~~~s~~y~~dvNa--~d~~G~TPLHlAA-~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveL 752 (872)
++. +|..|.||||+|| .+|+.+ +|++|+++| + .|.||||+|+.+|+.+++++
T Consensus 189 -----------~~~~~~d~~g~TpL~~Aa~~~G~~e-iv~~Ll~~g------a-------~~~taL~~Aa~~g~~evv~l 243 (376)
T 2aja_A 189 -----------EATAMIQAENYYAFRWAAVGRGHHN-VINFLLDCP------V-------MLAYAEIHEFEYGEKYVNPF 243 (376)
T ss_dssp -----------GHHHHHHHHHHHHHHHHHSTTCCHH-HHHHHTTSH------H-------HHHHHHHCTTTTTTTTHHHH
T ss_pred -----------cchhccCCCCCCHHHHHHHHCCCHH-HHHHHHhCC------C-------ccchHHHHHHHCCCHHHHHH
Confidence 333 6677999999999 998876 999998753 2 28999999999999999999
Q ss_pred HHHhhhhc
Q 002868 753 VQRKINKK 760 (872)
Q Consensus 753 L~~k~~~~ 760 (872)
|+++.++.
T Consensus 244 L~~~ga~~ 251 (376)
T 2aja_A 244 IARHVNRL 251 (376)
T ss_dssp HHHHHHHH
T ss_pred HHhcCccc
Confidence 99987754
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.47 E-value=1.2e-13 Score=124.07 Aligned_cols=86 Identities=17% Similarity=0.090 Sum_probs=75.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002868 595 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 674 (872)
Q Consensus 595 ~~~LLhfAve~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~~k~ 674 (872)
..++||+|+..|+.++++.||+.+. +++..+..|+||||+|+..|+.++|++||++|++
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~---------~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~------------ 82 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGA---------DVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD------------ 82 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTC---------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCC---------CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 5789999999999999999998753 2334467899999999999999999999999864
Q ss_pred HHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHh
Q 002868 675 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 714 (872)
Q Consensus 675 lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelL 714 (872)
+|.+|..|+||||+|+..++.+ ++++|
T Consensus 83 ------------~~~~d~~g~tpl~~A~~~~~~~-~~~~L 109 (110)
T 2zgd_A 83 ------------VXAQDKFGKTAFDISIDNGNED-LAEIL 109 (110)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHH-HHHHH
T ss_pred ------------ccccccCCCcHHHHHHHcCCHH-HHHHh
Confidence 6788999999999999998876 88887
No 114
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.46 E-value=7.4e-14 Score=157.27 Aligned_cols=103 Identities=19% Similarity=0.077 Sum_probs=79.7
Q ss_pred cchHHHHHHH---CCCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchh
Q 002868 595 FKWLLEFSME---HDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 671 (872)
Q Consensus 595 ~~~LLhfAve---~g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~ 671 (872)
-.++||+|+. .|+.+++++||+.++ +++..|..|+||||+|+..|+.++|++||++|++
T Consensus 171 g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga---------~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~--------- 232 (497)
T 3lvq_E 171 EELVLHLAVKVANQASLPLVDFIIQNGG---------HLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL--------- 232 (497)
T ss_dssp CBCHHHHHHHTCCTTTHHHHHHHHHHSC---------CTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCC---------
T ss_pred cchHHHHHHHhcccccHHHHHHHHHcCC---------CCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 4689999966 899999999998863 3334577899999999999999999999999875
Q ss_pred hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002868 672 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 743 (872)
Q Consensus 672 ~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~ 743 (872)
+|++|..|.||||+|+..++.+ ++++|++++ |+++. ||+|++..
T Consensus 233 ---------------~~~~d~~g~tpl~~A~~~~~~~-~~~~Ll~~g------a~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 233 ---------------VGTVNEAGETALDIARKKHHKE-CEELLEQAQ------AGTFA------FPLHVDYS 276 (497)
T ss_dssp ---------------CSCCCTTCCCHHHHHHHTTCHH-HHHHHHHTC------C------------------
T ss_pred ---------------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHhC------CCCCC------Ccceeecc
Confidence 6889999999999999998876 999998865 66665 56666543
No 115
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.43 E-value=1.5e-13 Score=144.11 Aligned_cols=90 Identities=17% Similarity=0.090 Sum_probs=79.0
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhhcCCcCCCCCCchhhhccCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchh
Q 002868 595 FKWLLEFSMEH---DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 671 (872)
Q Consensus 595 ~~~LLhfAve~---g~~aVvk~LLd~l~~anv~~~~as~~~~d~~G~TpLH~AV~~g~~eIVElLL~~Gad~~adg~~~~ 671 (872)
-+++||+|+.. |+.+++++||+.++ +++..|..|+||||+|+..|+.++|++||++|++
T Consensus 169 g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga---------~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad--------- 230 (278)
T 1dcq_A 169 DETALHLAVRSVDRTSLHIVDFLVQNSG---------NLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS--------- 230 (278)
T ss_dssp TCBHHHHHHHHCCTTTHHHHHHHHHHCS---------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred CCCcchHHHHhcccchHHHHHHHHHCCC---------CccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 46899999999 89999999998863 2334577899999999999999999999999875
Q ss_pred hHHHHhhhccCccccCCcCCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002868 672 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 718 (872)
Q Consensus 672 ~k~lv~~~s~~y~~dvNa~d~~G~TPLHlAA~~~~~e~VVelLL~~p 718 (872)
+|.+|..|.||||+|+..++.+ ++++|++++
T Consensus 231 ---------------~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~~g 261 (278)
T 1dcq_A 231 ---------------IEIANESGETPLDIAKRLKHEH-CEELLTQAL 261 (278)
T ss_dssp ---------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHHH
T ss_pred ---------------CCCccCCCCCHHHHHHHcCCHH-HHHHHHHcC
Confidence 6889999999999999998876 999998754
No 116
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.41 E-value=3.7e-13 Score=147.91 Aligned_cols=93 Identities=22% Similarity=0.196 Sum_probs=83.5
Q ss_pred cCCcHHHHHHHc-CCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhccCccccCCcCC--CCCchHHHHHHhcCChHHHHH
Q 002868 636 LEMGLLHKAVRR-NCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIG--PAGLTPLHVAACRDDAENVLD 712 (872)
Q Consensus 636 ~G~TpLH~AV~~-g~~eIVElLL~~Gad~~adg~~~~~k~lv~~~s~~y~~dvNa~d--~~G~TPLHlAA~~~~~e~VVe 712 (872)
.+.|+||+|+.. ++.++|++||++|++ +|..+ ..|.||||+|+..++.+ +|+
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad------------------------vn~~~~~~~g~TpLh~Aa~~g~~~-iv~ 252 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD------------------------VNWVNGGQDNATPLIQATAANSLL-ACE 252 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC------------------------TTCCCTTTTCCCHHHHHHHTTCHH-HHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC------------------------CCccccccCCCCHHHHHHHCCCHH-HHH
Confidence 466999999999 999999999999875 46666 78999999999998876 999
Q ss_pred HhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002868 713 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 759 (872)
Q Consensus 713 lLL~~p~~Ig~gA~vNakD~~G~TPLHyAa~~Gn~~iveLL~~k~~~ 759 (872)
+|++++ |++|.+|.+|+||||+|+..|+.+++++|+++.++
T Consensus 253 ~LL~~G------advn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad 293 (368)
T 3jue_A 253 FLLQNG------ANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD 293 (368)
T ss_dssp HHHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHcC------CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCC
Confidence 998864 78899999999999999999999999999998665
No 117
>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=98.96 E-value=5e-11 Score=100.00 Aligned_cols=36 Identities=14% Similarity=0.226 Sum_probs=34.5
Q ss_pred CcccccceEEeeeeccccchhhhhhhcccCcCccccc
Q 002868 2 PRITTGDIRFVICIQRQLKHLWETLCSDSASSVAEFD 38 (872)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~rfcq~c~~~f~~l~~fd 38 (872)
-|||+.|++-.+-+.+|+.+|||||||| ||+|+|||
T Consensus 25 ~rvCe~H~ka~~v~~~G~~~RFCQQCsr-FH~L~eFD 60 (60)
T 1wj0_A 25 HKVCEIHSKATTALVGGIMQRFCQQCSR-FHVLEEFD 60 (60)
T ss_dssp TTCCHHHHTCSCEEETTEEECCCSSSCS-CCBTTSCC
T ss_pred cccChhHcCCCEEEECCEEEehhhhccC-ccCcccCC
Confidence 4899999999999999999999999999 99999998
No 118
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=54.30 E-value=41 Score=30.22 Aligned_cols=45 Identities=11% Similarity=0.089 Sum_probs=38.5
Q ss_pred ceeeeeeceeeecCCceEEEEEeccCCCCCceEEEEecCceeeeee
Q 002868 426 CRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQET 471 (872)
Q Consensus 426 p~I~~V~P~Av~ag~~~~~~v~G~NL~~p~~rllc~~~G~Yl~~e~ 471 (872)
=.|..++|-+-..+..+.++|.|.+|.. +..+.|.|.+.-..++.
T Consensus 7 ~~Itd~sP~~gp~sGGTkv~I~G~~L~~-gs~~~~~fG~~~vpa~~ 51 (95)
T 2cxk_A 7 GMVTDYSPEWSYPEGGVKVLITGPWQEA-SNNYSCLFDQISVPASL 51 (95)
T ss_dssp SCCCEEECSEECTTCCCEEEEESSCCCC-SSCEEEEETTEEEECEE
T ss_pred EEEEEECCCcccCCCCEEEEEEeECCCC-CccEEEEECCEEEeEEE
Confidence 4899999999999999999999999964 46899999886666655
No 119
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=44.29 E-value=44 Score=29.98 Aligned_cols=39 Identities=26% Similarity=0.229 Sum_probs=32.1
Q ss_pred CceeeeeeceeeecCCceEEEEEeccCCCCCceE-EEEecCc
Q 002868 425 SCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRL-LCAIEGS 465 (872)
Q Consensus 425 ~p~I~~V~P~Av~ag~~~~~~v~G~NL~~p~~rl-lc~~~G~ 465 (872)
-|+|..++|..-..| +.+.++|+||......+ -+.+.|.
T Consensus 7 ~P~It~i~P~~Gp~G--T~vTI~G~nlg~~~sdv~~V~vgg~ 46 (99)
T 1uad_C 7 PPLVTGISPNEGIPW--TKVTIRGENLGTGPTDLIGLTICGH 46 (99)
T ss_dssp CCEEEEEESSEESTT--CEEEEEEECSCSSGGGEEEEEETTE
T ss_pred CCEEEEEECCCcCCC--CEEEEEEEeCCCCcccceEEEECCE
Confidence 479999999998665 99999999998876655 4777773
No 120
>1pby_A Quinohemoprotein amine dehydrogenase 60 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: a.3.1.7 a.3.1.7 b.1.18.14 b.1.18.14 b.61.4.1 PDB: 1jju_A*
Probab=22.98 E-value=1.3e+02 Score=34.59 Aligned_cols=44 Identities=14% Similarity=0.221 Sum_probs=35.8
Q ss_pred ccCCCCceeeeeeceeeecCCceEEEEEeccCCC-----CCceEEEEec
Q 002868 420 LKSHKSCRISSIKPIAVPVSERVKFVVKGFNLSR-----STTRLLCAIE 463 (872)
Q Consensus 420 ~~s~~~p~I~~V~P~Av~ag~~~~~~v~G~NL~~-----p~~rllc~~~ 463 (872)
.+++.-|+|+.|.|-.+.+|.+++++|-|.+|.. ++.++..+..
T Consensus 270 ~~~~~~~~~~av~P~~l~aG~~~~~~i~G~gL~g~~~l~~gv~v~~~s~ 318 (489)
T 1pby_A 270 VKADAAPQVLAVAPARLKIGEETQLRVAGTGLGSDLTLPEGVAGSVESA 318 (489)
T ss_dssp EETTCSSEEEEEESCEEETTCCEEEEEEEESCCSCEECCTTEEEEEEEC
T ss_pred eecCCCceEEEeChhhhcCCCceEEEEEecccccccccCCceEEEEecC
Confidence 4445678999999999999999999999999975 5667773333
Done!