Your job contains 1 sequence.
>002870
MAPDPNSASGSGTKDEASVKVPAKDPKKKDDKKDEDLSEEDLALKQQLELYVERVQDPDP
GLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMPDSDLKKYMADILSV
LALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAKRQTDEASIDDLMEL
VQEIVAFHMKHNAEPEAVDLLMEVEDLDLLVEHVDATNFKRTCLYLTSAAKYLPGPDDML
VLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGITLEL
DDDMVPDDDDRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGAS
VDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGM
ILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGREDAC
IRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQ
AIIFALMDRSESELGEPLTRLIPLGLGLLYLGKQESVEATAEVSKTFNEKIRKYCDMTLL
SCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLL
QYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNA
RIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTT
LFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPVRVGQAVDVVGQAGRP
KTITGFQTHSTPVLLAAGDRAELATEKSDILL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002870
(872 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2046016 - symbol:RPN1A "26S proteasome regulat... 3382 0. 1
TAIR|locus:2121358 - symbol:RPN1B "26S proteasome regulat... 3263 0. 1
UNIPROTKB|E2RCP9 - symbol:PSMD2 "Uncharacterized protein"... 1349 5.0e-214 2
RGD|1305752 - symbol:Psmd2 "proteasome (prosome, macropai... 1347 8.1e-214 2
UNIPROTKB|P56701 - symbol:PSMD2 "26S proteasome non-ATPas... 1347 8.1e-214 2
UNIPROTKB|Q13200 - symbol:PSMD2 "26S proteasome non-ATPas... 1347 8.1e-214 2
UNIPROTKB|I3LEW5 - symbol:PSMD2 "Uncharacterized protein"... 1347 8.1e-214 2
MGI|MGI:1096584 - symbol:Psmd2 "proteasome (prosome, macr... 1346 1.0e-213 2
UNIPROTKB|Q5R9I6 - symbol:PSMD2 "26S proteasome non-ATPas... 1346 1.0e-213 2
ZFIN|ZDB-GENE-040426-1480 - symbol:psmd2 "proteasome (pro... 1332 1.7e-211 2
DICTYBASE|DDB_G0293752 - symbol:psmD2 "26S proteasome non... 1337 3.2e-210 2
FB|FBgn0028695 - symbol:Rpn1 "Regulatory particle non-ATP... 1215 3.8e-194 2
UNIPROTKB|E7EW34 - symbol:PSMD2 "26S proteasome non-ATPas... 1118 1.3e-189 2
POMBASE|SPBP19A11.03c - symbol:mts4 "19S proteasome regul... 1782 1.1e-183 1
WB|WBGene00004458 - symbol:rpn-1 species:6239 "Caenorhabd... 1119 2.3e-181 2
ASPGD|ASPL0000062698 - symbol:AN10020 species:162425 "Eme... 1722 2.5e-177 1
UNIPROTKB|E9PCS3 - symbol:PSMD2 "26S proteasome non-ATPas... 998 6.5e-177 2
UNIPROTKB|F1P4P8 - symbol:PSMD2 "Uncharacterized protein"... 1356 2.5e-164 2
CGD|CAL0006334 - symbol:RPN1 species:5476 "Candida albica... 1003 3.1e-164 2
UNIPROTKB|E1BX02 - symbol:PSMD2 "Uncharacterized protein"... 1356 9.5e-150 2
SGD|S000001069 - symbol:RPN1 "Base subunit of the 19S reg... 536 3.2e-127 3
GENEDB_PFALCIPARUM|PFB0260w - symbol:PFB0260w "proteasome... 802 7.6e-80 1
UNIPROTKB|O96153 - symbol:PFB0260w "Proteasome 26S regula... 802 7.6e-80 1
UNIPROTKB|C9JPC0 - symbol:PSMD2 "26S proteasome non-ATPas... 339 9.6e-41 2
UNIPROTKB|H9KZ05 - symbol:Gga.48069 "Uncharacterized prot... 421 1.1e-38 1
UNIPROTKB|H7C1H2 - symbol:PSMD2 "26S proteasome non-ATPas... 400 2.2e-36 1
UNIPROTKB|F1P4Q5 - symbol:PSMD2 "Uncharacterized protein"... 381 2.5e-34 1
UNIPROTKB|H7C2Q3 - symbol:PSMD2 "26S proteasome non-ATPas... 320 9.5e-28 1
TAIR|locus:2128823 - symbol:AT4G08140 "AT4G08140" species... 276 5.1e-23 1
CGD|CAL0003585 - symbol:RPN2 species:5476 "Candida albica... 229 3.6e-15 1
SGD|S000001337 - symbol:RPN2 "Subunit of the 26S proteaso... 219 4.2e-13 2
POMBASE|SPBC17D11.07c - symbol:rpn2 "19S proteasome regul... 202 3.0e-12 1
TAIR|locus:2010672 - symbol:AT1G04810 species:3702 "Arabi... 185 2.4e-11 2
WB|WBGene00004459 - symbol:rpn-2 species:6239 "Caenorhabd... 200 6.2e-11 2
UNIPROTKB|Q18115 - symbol:rpn-2 "26S proteasome non-ATPas... 200 6.2e-11 2
TAIR|locus:2046402 - symbol:AT2G32730 species:3702 "Arabi... 185 5.3e-10 2
ASPGD|ASPL0000047917 - symbol:AN1700 species:162425 "Emer... 173 5.1e-09 1
DICTYBASE|DDB_G0287953 - symbol:psmD1 "26S proteasome reg... 173 3.1e-08 2
UNIPROTKB|F1NUT6 - symbol:PSMD1 "26S proteasome non-ATPas... 147 4.5e-08 3
UNIPROTKB|E1C5P3 - symbol:PSMD1 "26S proteasome non-ATPas... 147 4.5e-08 3
UNIPROTKB|Q99460 - symbol:PSMD1 "26S proteasome non-ATPas... 146 5.7e-08 3
UNIPROTKB|A7MBA2 - symbol:PSMD1 "Uncharacterized protein"... 146 5.7e-08 3
UNIPROTKB|F1PX57 - symbol:PSMD1 "Uncharacterized protein"... 146 5.7e-08 3
UNIPROTKB|Q5R5S4 - symbol:PSMD1 "26S proteasome non-ATPas... 146 5.7e-08 3
MGI|MGI:1917497 - symbol:Psmd1 "proteasome (prosome, macr... 146 5.7e-08 3
ZFIN|ZDB-GENE-040426-810 - symbol:psmd1 "proteasome (pros... 144 5.9e-08 3
UNIPROTKB|F1LRN6 - symbol:Psmd1 "26S proteasome non-ATPas... 145 7.2e-08 3
UNIPROTKB|G3V8B6 - symbol:Psmd1 "26S proteasome non-ATPas... 145 7.2e-08 3
UNIPROTKB|Q5F418 - symbol:PSMD1 "26S proteasome non-ATPas... 143 1.2e-07 3
RGD|621669 - symbol:Psmd1 "proteasome (prosome, macropain... 142 1.2e-07 3
UNIPROTKB|J9P4R4 - symbol:PSMD1 "Uncharacterized protein"... 123 4.9e-06 3
GENEDB_PFALCIPARUM|PF14_0632 - symbol:PF14_0632 "26S prot... 151 1.0e-05 2
UNIPROTKB|Q8IKH3 - symbol:PF14_0632 "26S proteasome subun... 151 1.0e-05 2
FB|FBgn0028692 - symbol:Rpn2 "Regulatory particle non-ATP... 139 0.00011 2
>TAIR|locus:2046016 [details] [associations]
symbol:RPN1A "26S proteasome regulatory subunit S2 1A"
species:3702 "Arabidopsis thaliana" [GO:0000502 "proteasome
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS;IDA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0030163 "protein catabolic process"
evidence=TAS] [GO:0051726 "regulation of cell cycle" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0043130 "ubiquitin
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 GO:GO:0005634
GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0051726 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
GO:GO:0043130 EMBL:AC007048 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EMBL:AY230828 EMBL:AF360216 EMBL:AY040061 EMBL:AK220903
IPI:IPI00529314 PIR:A84591 RefSeq:NP_565477.1 UniGene:At.22879
ProteinModelPortal:Q9SIV2 IntAct:Q9SIV2 STRING:Q9SIV2 PaxDb:Q9SIV2
PRIDE:Q9SIV2 EnsemblPlants:AT2G20580.1 GeneID:816580
KEGG:ath:AT2G20580 TAIR:At2g20580 InParanoid:Q9SIV2
PhylomeDB:Q9SIV2 ProtClustDB:CLSN2688277 Genevestigator:Q9SIV2
Uniprot:Q9SIV2
Length = 891
Score = 3382 (1195.6 bits), Expect = 0., P = 0.
Identities = 667/869 (76%), Positives = 733/869 (84%)
Query: 1 MAP--DPNSASGSGTKDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQLELYVERVQDP 58
MAP DPNS G KDE Q LELYVERVQDP
Sbjct: 1 MAPTQDPNSVGGGAKKDEATLKVPSKDPKKKDEKKDEDLSEEDLELKQNLELYVERVQDP 60
Query: 59 DPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMPDSDLKKYMADIL 118
+P LQK ALESMR EIR STSSMTSVPKPLKFLRPHYGTLKA++ETM DSDLKKY++DIL
Sbjct: 61 NPELQKAALESMRQEIRASTSSMTSVPKPLKFLRPHYGTLKAFHETMADSDLKKYLSDIL 120
Query: 119 SVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAKRQTDEASIDDLM 178
SVLALTMSA+GERESL++RL+G+EGDIGSWGHEYVRNLAGEIAQEY KRQ++EASIDDLM
Sbjct: 121 SVLALTMSADGERESLRFRLIGTEGDIGSWGHEYVRNLAGEIAQEYTKRQSEEASIDDLM 180
Query: 179 ELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDD 238
ELVQ+IVAFHMKHNAE TNFKRTC YLTSAA+YLPGPDD
Sbjct: 181 ELVQQIVAFHMKHNAETEAVDLLMDVEDLDLLLEHVDKTNFKRTCNYLTSAARYLPGPDD 240
Query: 239 MLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGITL 298
MLVLDI+YMIY+KFEE+PNALQIALFLDN QYVKQ+FTSC DLL+KKQFCY++ARHGIT
Sbjct: 241 MLVLDISYMIYMKFEEYPNALQIALFLDNTQYVKQVFTSCTDLLKKKQFCYMIARHGITF 300
Query: 299 ELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAG 358
EL R ALQDIVNN KLSEGYLTLARDIEVME K+PEDIYKAHLLDGRAS+G
Sbjct: 301 ELDDEMVADDDDREALQDIVNNTKLSEGYLTLARDIEVMEAKTPEDIYKAHLLDGRASSG 360
Query: 359 ASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASL 418
ASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSD+++G SSGNWLFKNKEHGK SAAASL
Sbjct: 361 ASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDSTTG-SSGNWLFKNKEHGKTSAAASL 419
Query: 419 GMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGRED 478
GMI LWDVDSGL+Q+DKYFHS DN +IAGALLGVGIVNCGI+NDCDPALALL +Y+ +ED
Sbjct: 420 GMIQLWDVDSGLSQLDKYFHSNDNPIIAGALLGVGIVNCGIKNDCDPALALLGDYIDKED 479
Query: 479 ACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEV 538
+ +RIGAIMGLGISYAG+QNDQIR+KLS ILNDAK+PLDVIAF+++SLG+IYVGSCNEEV
Sbjct: 480 SSVRIGAIMGLGISYAGSQNDQIRNKLSPILNDAKAPLDVIAFASLSLGMIYVGSCNEEV 539
Query: 539 AQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMT 598
AQ+IIFALMDRSE+ELG+ KQESVEATAEVSKTFNEKIRKYCDMT
Sbjct: 540 AQSIIFALMDRSEAELGDALTRFLPLGLGLLYLGKQESVEATAEVSKTFNEKIRKYCDMT 599
Query: 599 LLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEH 658
LLSCAYAGTGNVLKVQ+LL C +H EKG+ +QGPAVLG+AMVAM+EELG++M IRSLE
Sbjct: 600 LLSCAYAGTGNVLKVQDLLAQCGEHLEKGDIHQGPAVLGLAMVAMSEELGVDMEIRSLER 659
Query: 659 LLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTN 718
+LQYGEQNIRRAVPLALGLLCISNPKV VMDTLSRLSHDTDSEVAM+A+ISLGLIG+GTN
Sbjct: 660 MLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSEVAMSAIISLGLIGAGTN 719
Query: 719 NARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIV 778
NARIAGMLRNLSSYYYKD +LLFCVRIAQGLVHMGKGLLTL+P+HS+RFLLSPTALAGIV
Sbjct: 720 NARIAGMLRNLSSYYYKDMSLLFCVRIAQGLVHMGKGLLTLSPFHSERFLLSPTALAGIV 779
Query: 779 TTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXX 838
T L ACLDMK +I+GKYHYVLYFLVLAMQPRM+LTVDENLKPLS
Sbjct: 780 TLLHACLDMKPIILGKYHYVLYFLVLAMQPRMMLTVDENLKPLSVPVRVGQAVDVVGQAG 839
Query: 839 XPKTITGFQTHSTPVLLAAGDRAELATEK 867
PKTITGFQTHSTPVLLAAG+RAELAT+K
Sbjct: 840 RPKTITGFQTHSTPVLLAAGERAELATDK 868
>TAIR|locus:2121358 [details] [associations]
symbol:RPN1B "26S proteasome regulatory subunit S2 1B"
species:3702 "Arabidopsis thaliana" [GO:0000502 "proteasome
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0030163 EMBL:AL021749 EMBL:AL161572 GO:GO:0042176
UniGene:At.13247 GO:GO:0008540 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 PANTHER:PTHR10943:SF1 OMA:QWNINEG
ProtClustDB:CLSN2688277 EMBL:AY230829 IPI:IPI00657061 PIR:T04617
RefSeq:NP_194576.5 UniGene:At.32013 ProteinModelPortal:Q6XJG8
SMR:Q6XJG8 IntAct:Q6XJG8 STRING:Q6XJG8 PaxDb:Q6XJG8 PRIDE:Q6XJG8
EnsemblPlants:AT4G28470.1 GeneID:828964 KEGG:ath:AT4G28470
TAIR:At4g28470 InParanoid:Q6XJG8 PhylomeDB:Q6XJG8
Genevestigator:Q6XJG8 Uniprot:Q6XJG8
Length = 891
Score = 3263 (1153.7 bits), Expect = 0., P = 0.
Identities = 643/865 (74%), Positives = 713/865 (82%)
Query: 3 PDPNSASGSGTKDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQLELYVERVQDPDPGL 62
PDPNS G +DE Q LELYVERVQDP+P L
Sbjct: 5 PDPNSVGGGAKRDEATTKIPSKDSKKKDDKKEEDLSEEDLQLKQNLELYVERVQDPNPEL 64
Query: 63 QKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMPDSDLKKYMADILSVLA 122
QK+ALESMR EIR STSSMTSVPKPLKFLRPHYG LK ++ M +SDLKK +ADILSVLA
Sbjct: 65 QKIALESMRKEIRDSTSSMTSVPKPLKFLRPHYGVLKEFHAKMAESDLKKMLADILSVLA 124
Query: 123 LTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAKRQTDEASIDDLMELVQ 182
LTMSAEGERESL YRL GSE DIGSWGHEYVRNLAGEIA+EY RQ +E+SI+DLM+LVQ
Sbjct: 125 LTMSAEGERESLNYRLNGSESDIGSWGHEYVRNLAGEIAKEYTIRQGEESSIEDLMDLVQ 184
Query: 183 EIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVL 242
+IV+FHMKHNAE TNF+RTC YLTSAAKYLPGPDDMLVL
Sbjct: 185 QIVSFHMKHNAETEAVDLLMDVEDLDLLLEHVDNTNFRRTCNYLTSAAKYLPGPDDMLVL 244
Query: 243 DIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGITLELXX 302
DIAYMIY+KF E+PNALQIALFLDNMQYVKQ+FTSC DL++KKQFCY++ARHG+T EL
Sbjct: 245 DIAYMIYIKFAEYPNALQIALFLDNMQYVKQVFTSCTDLVKKKQFCYMIARHGMTFELDQ 304
Query: 303 XXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVD 362
+ ALQDIVNN KLSEGYLTLARDIEVME K+PEDIYKAHLLDGRAS+G SVD
Sbjct: 305 EMVANDEDKEALQDIVNNSKLSEGYLTLARDIEVMEAKTPEDIYKAHLLDGRASSGPSVD 364
Query: 363 SARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMIL 422
SARQNL+ATFVNAFVNAGFGQDKLMTVPSD++SG S+GNWLFKNKEHGK SA ASLGMI
Sbjct: 365 SARQNLSATFVNAFVNAGFGQDKLMTVPSDSTSG-SAGNWLFKNKEHGKTSAVASLGMIQ 423
Query: 423 LWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGREDACIR 482
LWDV++GL +DKYFHS DN V+AGALLGVGIVNCGI+NDCDPA ALLS Y+ ED+ +R
Sbjct: 424 LWDVETGLGHLDKYFHSNDNPVVAGALLGVGIVNCGIKNDCDPAFALLSGYIDNEDSSVR 483
Query: 483 IGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAI 542
IGAIMGLGI+YAG+QNDQI+ +LS ILNDA +PLDVIAF+A+SLG+IYVGSCNEEVAQ+I
Sbjct: 484 IGAIMGLGIAYAGSQNDQIKIRLSPILNDANAPLDVIAFAALSLGMIYVGSCNEEVAQSI 543
Query: 543 IFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSC 602
IFALMDRSE+ELGE KQESVEATAEVSKTFNEKIRKYCDMTLLSC
Sbjct: 544 IFALMDRSEAELGEALTRFLPLGLGLLYLGKQESVEATAEVSKTFNEKIRKYCDMTLLSC 603
Query: 603 AYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQY 662
AYAGTGNVLKVQ+LL C +H KG+ +QGPAV+G+AMVAM+EELGL+M IRSLE +LQY
Sbjct: 604 AYAGTGNVLKVQDLLAQCGEHLVKGDIHQGPAVIGLAMVAMSEELGLDMEIRSLERVLQY 663
Query: 663 GEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARI 722
GEQNIRRAVPLALGLLCISNPKV VMDTLSRLSHDTDSEVAMAA+ISLGLIG+GTNNARI
Sbjct: 664 GEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSEVAMAAIISLGLIGAGTNNARI 723
Query: 723 AGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 782
AGMLRNLSSYYYKDA+LLFCVRIAQG VHMGKGLLTLNP+HS+R LLSPTALAGIVT L
Sbjct: 724 AGMLRNLSSYYYKDASLLFCVRIAQGFVHMGKGLLTLNPFHSERLLLSPTALAGIVTLLH 783
Query: 783 ACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKT 842
ACLDMK++I+GKYHYVLYFLVLAMQPRM+LTVD++LKP+S PKT
Sbjct: 784 ACLDMKSIILGKYHYVLYFLVLAMQPRMMLTVDQSLKPISVPVRVGQAVDVVGQAGRPKT 843
Query: 843 ITGFQTHSTPVLLAAGDRAELATEK 867
ITGFQTHSTPVLLAAG+RAELATEK
Sbjct: 844 ITGFQTHSTPVLLAAGERAELATEK 868
>UNIPROTKB|E2RCP9 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 Pfam:PF01851 CTD:5708
GeneTree:ENSGT00550000074983 KO:K03028 OMA:IAQGLTH
PANTHER:PTHR10943:SF1 EMBL:AAEX03017275 RefSeq:XP_535824.3
Ensembl:ENSCAFT00000020103 GeneID:478654 KEGG:cfa:478654
NextBio:20853959 Uniprot:E2RCP9
Length = 908
Score = 1349 (479.9 bits), Expect = 5.0e-214, Sum P(2) = 5.0e-214
Identities = 273/585 (46%), Positives = 386/585 (65%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M
Sbjct: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAK 166
+ K++ ADI+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYVR+LAGE+A+E+ +
Sbjct: 115 PGENKRFAADIISVLAMTMS--GERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQE 172
Query: 167 RQTDEASI-DDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLY 225
E S + L+ LV+EIV ++M HNAE + + CLY
Sbjct: 173 LDDAEKSQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLY 232
Query: 226 LTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 285
LTS Y+P P++ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +K
Sbjct: 233 LTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQK 292
Query: 286 QFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDI 345
Q ++L RHG+ LEL L +I++NV+L+ +L LAR++++MEPK P+DI
Sbjct: 293 QMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDI 348
Query: 346 YKAHLLDGR-ASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WL 403
YK HL + R +G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL
Sbjct: 349 YKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWL 399
Query: 404 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDC 463
+KNK+HG +SAAASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+C
Sbjct: 400 YKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNEC 459
Query: 464 DPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSA 523
DPALALLS+YV +R+G+I GLG++YAG+ + + L ++ D+KS ++V +A
Sbjct: 460 DPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTA 519
Query: 524 ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEV 583
++ G+I VGSCN +V I+ +M++SE+EL + K E++EA
Sbjct: 520 LACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAA 579
Query: 584 SKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 628
+ +E R + + + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 580 LEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 742 (266.3 bits), Expect = 5.0e-214, Sum P(2) = 5.0e-214
Identities = 142/239 (59%), Positives = 183/239 (76%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 688
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 689 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 748
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 808
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 809 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE+
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEE 886
>RGD|1305752 [details] [associations]
symbol:Psmd2 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 RGD:1305752 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 Pfam:PF01851 CTD:5708 eggNOG:COG5110
GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
HOVERGEN:HBG001842 KO:K03028 OMA:IAQGLTH OrthoDB:EOG483D3X
PANTHER:PTHR10943:SF1 EMBL:BC099135 IPI:IPI00370456
RefSeq:NP_001026809.1 UniGene:Rn.29909 IntAct:Q4FZT9 STRING:Q4FZT9
PhosphoSite:Q4FZT9 PRIDE:Q4FZT9 Ensembl:ENSRNOT00000002358
GeneID:287984 KEGG:rno:287984 InParanoid:Q4FZT9 NextBio:627355
Genevestigator:Q4FZT9 Uniprot:Q4FZT9
Length = 908
Score = 1347 (479.2 bits), Expect = 8.1e-214, Sum P(2) = 8.1e-214
Identities = 272/585 (46%), Positives = 386/585 (65%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M
Sbjct: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAK 166
+ K + ADI+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYVR+LAGE+A+E+ +
Sbjct: 115 PGENKCFAADIISVLAMTMS--GERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQE 172
Query: 167 RQ-TDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLY 225
++A + L+ LV+EIV ++M HNAE + + CLY
Sbjct: 173 LDDAEKAQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYSKVCLY 232
Query: 226 LTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 285
LTS Y+P P++ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +K
Sbjct: 233 LTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQK 292
Query: 286 QFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDI 345
Q ++L RHG+ LEL L +I++NV+L+ +L LAR++++MEPK P+DI
Sbjct: 293 QMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDI 348
Query: 346 YKAHLLDGR-ASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WL 403
YK HL + R +G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL
Sbjct: 349 YKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWL 399
Query: 404 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDC 463
+KNK+HG +SAAASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+C
Sbjct: 400 YKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNEC 459
Query: 464 DPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSA 523
DPALALLS+YV +R+G+I GLG++YAG+ + + L ++ D+KS ++V +A
Sbjct: 460 DPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTA 519
Query: 524 ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEV 583
++ G+I VGSCN +V I+ +M++SE+EL + K E++EA
Sbjct: 520 LACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAA 579
Query: 584 SKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 628
+ +E R + + + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 580 LEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 742 (266.3 bits), Expect = 8.1e-214, Sum P(2) = 8.1e-214
Identities = 142/239 (59%), Positives = 183/239 (76%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 688
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 689 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 748
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 808
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 809 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE+
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEE 886
Score = 37 (18.1 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 141 SEGDIGSWGHEYVRNLAGEIAQEYAKRQTDEASIDDLMELVQEI 184
S D S G E R AGE +E + D+ D+L LV+ +
Sbjct: 22 SGADEKSSGKE--RRDAGEKDKEQELSEEDKQLQDELEMLVERL 63
>UNIPROTKB|P56701 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 Pfam:PF01851
EMBL:BT030686 EMBL:BC105524 IPI:IPI00710615 RefSeq:NP_001094667.1
UniGene:Bt.20443 STRING:P56701 PRIDE:P56701
Ensembl:ENSBTAT00000007436 GeneID:539784 KEGG:bta:539784 CTD:5708
eggNOG:COG5110 GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
HOVERGEN:HBG001842 InParanoid:P56701 KO:K03028 OMA:IAQGLTH
OrthoDB:EOG483D3X NextBio:20878217 PANTHER:PTHR10943:SF1
Uniprot:P56701
Length = 908
Score = 1347 (479.2 bits), Expect = 8.1e-214, Sum P(2) = 8.1e-214
Identities = 271/585 (46%), Positives = 386/585 (65%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M
Sbjct: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAK 166
+ K++ ADI+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYVR+LAGE+A+E+ +
Sbjct: 115 PGENKRFAADIISVLAMTMS--GERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQE 172
Query: 167 RQ-TDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLY 225
++ + L+ LV+EIV ++M HNAE + + CLY
Sbjct: 173 LDDAEKTQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLY 232
Query: 226 LTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 285
LTS Y+P P++ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +K
Sbjct: 233 LTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQK 292
Query: 286 QFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDI 345
Q ++L RHG+ LEL L +I++NV+L+ +L LAR++++MEPK P+DI
Sbjct: 293 QMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDI 348
Query: 346 YKAHLLDGR-ASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WL 403
YK HL + R +G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL
Sbjct: 349 YKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWL 399
Query: 404 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDC 463
+KNK+HG +SAAASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+C
Sbjct: 400 YKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNEC 459
Query: 464 DPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSA 523
DPALALLS+YV +R+G+I GLG++YAG+ + + L ++ D+KS ++V +A
Sbjct: 460 DPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTA 519
Query: 524 ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEV 583
++ G+I VGSCN +V I+ +M++SE+EL + K E++EA
Sbjct: 520 LACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAA 579
Query: 584 SKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 628
+ +E R + + + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 580 LEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 742 (266.3 bits), Expect = 8.1e-214, Sum P(2) = 8.1e-214
Identities = 142/239 (59%), Positives = 183/239 (76%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 688
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 689 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 748
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 808
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 809 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE+
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEE 886
>UNIPROTKB|Q13200 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0005838 "proteasome regulatory particle" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0030234 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
SUPFAM:SSF48371 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188
GO:GO:0005838 Pfam:PF01851 CTD:5708 eggNOG:COG5110
HOVERGEN:HBG001842 KO:K03028 OMA:IAQGLTH OrthoDB:EOG483D3X
PANTHER:PTHR10943:SF1 EMBL:D78151 EMBL:BT009736 EMBL:BC002368
EMBL:BC002997 EMBL:BC007897 EMBL:U12596 EMBL:X86446 IPI:IPI00012268
RefSeq:NP_002799.3 UniGene:Hs.518464 ProteinModelPortal:Q13200
SMR:Q13200 IntAct:Q13200 MINT:MINT-1142723 STRING:Q13200
PhosphoSite:Q13200 DMDM:6174930 PaxDb:Q13200 PeptideAtlas:Q13200
PRIDE:Q13200 DNASU:5708 Ensembl:ENST00000310118 GeneID:5708
KEGG:hsa:5708 UCSC:uc003fnn.1 GeneCards:GC03P184016 HGNC:HGNC:9559
HPA:HPA045192 MIM:606223 neXtProt:NX_Q13200 PharmGKB:PA33905
InParanoid:Q13200 PhylomeDB:Q13200 ChiTaRS:PSMD2 GenomeRNAi:5708
NextBio:22178 ArrayExpress:Q13200 Bgee:Q13200 CleanEx:HS_PSMD2
Genevestigator:Q13200 GermOnline:ENSG00000175166 Uniprot:Q13200
Length = 908
Score = 1347 (479.2 bits), Expect = 8.1e-214, Sum P(2) = 8.1e-214
Identities = 271/585 (46%), Positives = 386/585 (65%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M
Sbjct: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAK 166
+ K++ ADI+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYVR+LAGE+A+E+ +
Sbjct: 115 PGENKRFAADIISVLAMTMS--GERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQE 172
Query: 167 RQ-TDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLY 225
++ + L+ LV+EIV ++M HNAE + + CLY
Sbjct: 173 LDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLY 232
Query: 226 LTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 285
LTS Y+P P++ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +K
Sbjct: 233 LTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQK 292
Query: 286 QFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDI 345
Q ++L RHG+ LEL L +I++NV+L+ +L LAR++++MEPK P+DI
Sbjct: 293 QMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDI 348
Query: 346 YKAHLLDGR-ASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WL 403
YK HL + R +G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL
Sbjct: 349 YKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWL 399
Query: 404 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDC 463
+KNK+HG +SAAASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+C
Sbjct: 400 YKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNEC 459
Query: 464 DPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSA 523
DPALALLS+YV +R+G+I GLG++YAG+ + + L ++ D+KS ++V +A
Sbjct: 460 DPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTA 519
Query: 524 ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEV 583
++ G+I VGSCN +V I+ +M++SE+EL + K E++EA
Sbjct: 520 LACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAA 579
Query: 584 SKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 628
+ +E R + + + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 580 LEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 742 (266.3 bits), Expect = 8.1e-214, Sum P(2) = 8.1e-214
Identities = 142/239 (59%), Positives = 183/239 (76%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 688
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 689 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 748
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 808
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 809 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE+
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEE 886
>UNIPROTKB|I3LEW5 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 Pfam:PF01851 CTD:5708 GeneTree:ENSGT00550000074983
KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1 EMBL:FP312667
RefSeq:NP_001230406.1 UniGene:Ssc.1642 Ensembl:ENSSSCT00000024405
GeneID:100627568 KEGG:ssc:100627568 Uniprot:I3LEW5
Length = 908
Score = 1347 (479.2 bits), Expect = 8.1e-214, Sum P(2) = 8.1e-214
Identities = 271/585 (46%), Positives = 386/585 (65%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M
Sbjct: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAK 166
+ K++ ADI+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYVR+LAGE+A+E+ +
Sbjct: 115 PGENKRFAADIISVLAMTMS--GERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQE 172
Query: 167 RQ-TDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLY 225
++ + L+ LV+EIV ++M HNAE + + CLY
Sbjct: 173 LDDAEKTQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLY 232
Query: 226 LTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 285
LTS Y+P P++ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +K
Sbjct: 233 LTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQK 292
Query: 286 QFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDI 345
Q ++L RHG+ LEL L +I++NV+L+ +L LAR++++MEPK P+DI
Sbjct: 293 QMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDI 348
Query: 346 YKAHLLDGR-ASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WL 403
YK HL + R +G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL
Sbjct: 349 YKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWL 399
Query: 404 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDC 463
+KNK+HG +SAAASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+C
Sbjct: 400 YKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNEC 459
Query: 464 DPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSA 523
DPALALLS+YV +R+G+I GLG++YAG+ + + L ++ D+KS ++V +A
Sbjct: 460 DPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTA 519
Query: 524 ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEV 583
++ G+I VGSCN +V I+ +M++SE+EL + K E++EA
Sbjct: 520 LACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAA 579
Query: 584 SKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 628
+ +E R + + + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 580 LEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 742 (266.3 bits), Expect = 8.1e-214, Sum P(2) = 8.1e-214
Identities = 142/239 (59%), Positives = 183/239 (76%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 688
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 689 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 748
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 808
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 809 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE+
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEE 886
>MGI|MGI:1096584 [details] [associations]
symbol:Psmd2 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0022624 "proteasome accessory complex" evidence=IDA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
MGI:MGI:1096584 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 Pfam:PF01851 CTD:5708
eggNOG:COG5110 GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
HOVERGEN:HBG001842 KO:K03028 OMA:IAQGLTH OrthoDB:EOG483D3X
PANTHER:PTHR10943:SF1 ChiTaRS:PSMD2 EMBL:BC021508 EMBL:BC024830
EMBL:BC027388 EMBL:BC027767 EMBL:BC027822 EMBL:BC028851
EMBL:BC031128 IPI:IPI00123494 RefSeq:NP_598862.1 UniGene:Mm.243234
ProteinModelPortal:Q8VDM4 SMR:Q8VDM4 IntAct:Q8VDM4 STRING:Q8VDM4
PhosphoSite:Q8VDM4 PaxDb:Q8VDM4 PRIDE:Q8VDM4
Ensembl:ENSMUST00000007212 GeneID:21762 KEGG:mmu:21762
InParanoid:Q8VDM4 NextBio:301080 Bgee:Q8VDM4 Genevestigator:Q8VDM4
GermOnline:ENSMUSG00000006998 Uniprot:Q8VDM4
Length = 908
Score = 1346 (478.9 bits), Expect = 1.0e-213, Sum P(2) = 1.0e-213
Identities = 272/585 (46%), Positives = 386/585 (65%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M
Sbjct: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAK 166
+ K + ADI+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYVR+LAGE+A+E+ +
Sbjct: 115 PGENKCFAADIISVLAMTMS--GERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQE 172
Query: 167 RQ-TDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLY 225
++A + L+ LV+EIV ++M HNAE + + CLY
Sbjct: 173 LDDAEKAQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLY 232
Query: 226 LTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 285
LTS Y+P P++ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +K
Sbjct: 233 LTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQK 292
Query: 286 QFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDI 345
Q ++L RHG+ LEL L +I++NV+L+ +L LAR++++MEPK P+DI
Sbjct: 293 QMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDI 348
Query: 346 YKAHLLDGR-ASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WL 403
YK HL + R +G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL
Sbjct: 349 YKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWL 399
Query: 404 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDC 463
+KNK+HG +SAAASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+C
Sbjct: 400 YKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNEC 459
Query: 464 DPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSA 523
DPALALLS+YV +R+G+I GLG++YAG+ + + L ++ D+KS ++V +A
Sbjct: 460 DPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTA 519
Query: 524 ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEV 583
++ G+I VGSCN +V I+ +M++SE+EL + K E++EA
Sbjct: 520 LACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAA 579
Query: 584 SKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 628
+ +E R + + + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 580 LEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 742 (266.3 bits), Expect = 1.0e-213, Sum P(2) = 1.0e-213
Identities = 142/239 (59%), Positives = 183/239 (76%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 688
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 689 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 748
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 808
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 809 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE+
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEE 886
Score = 37 (18.1 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 141 SEGDIGSWGHEYVRNLAGEIAQEYAKRQTDEASIDDLMELVQEI 184
S D S G E R AGE +E + D+ D+L LV+ +
Sbjct: 22 SGADEKSSGKE--RRDAGEKDKEQELSEEDKQLQDELEMLVERL 63
>UNIPROTKB|Q5R9I6 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 Pfam:PF01851 CTD:5708
HOVERGEN:HBG001842 KO:K03028 PANTHER:PTHR10943:SF1 EMBL:CR859401
EMBL:CR859332 RefSeq:NP_001125887.1 UniGene:Pab.19003
ProteinModelPortal:Q5R9I6 PRIDE:Q5R9I6 GeneID:100172819
KEGG:pon:100172819 Uniprot:Q5R9I6
Length = 908
Score = 1346 (478.9 bits), Expect = 1.0e-213, Sum P(2) = 1.0e-213
Identities = 270/585 (46%), Positives = 386/585 (65%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M
Sbjct: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAK 166
+ K++ ADI+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYVR+LAGE+A+E+ +
Sbjct: 115 PGENKRFAADIISVLAMTMS--GERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQE 172
Query: 167 RQ-TDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLY 225
++ + L+ LV+EI+ ++M HNAE + + CLY
Sbjct: 173 LDDAEKVQREPLLTLVKEIIPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLY 232
Query: 226 LTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 285
LTS Y+P P++ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +K
Sbjct: 233 LTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQK 292
Query: 286 QFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDI 345
Q ++L RHG+ LEL L +I++NV+L+ +L LAR++++MEPK P+DI
Sbjct: 293 QMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDI 348
Query: 346 YKAHLLDGR-ASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WL 403
YK HL + R +G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL
Sbjct: 349 YKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWL 399
Query: 404 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDC 463
+KNK+HG +SAAASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+C
Sbjct: 400 YKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNEC 459
Query: 464 DPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSA 523
DPALALLS+YV +R+G+I GLG++YAG+ + + L ++ D+KS ++V +A
Sbjct: 460 DPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTA 519
Query: 524 ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEV 583
++ G+I VGSCN +V I+ +M++SE+EL + K E++EA
Sbjct: 520 LACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAA 579
Query: 584 SKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 628
+ +E R + + + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 580 LEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 742 (266.3 bits), Expect = 1.0e-213, Sum P(2) = 1.0e-213
Identities = 142/239 (59%), Positives = 183/239 (76%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 688
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 689 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 748
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 808
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 809 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE+
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEE 886
>ZFIN|ZDB-GENE-040426-1480 [details] [associations]
symbol:psmd2 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 2" species:7955 "Danio rerio" [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 ZFIN:ZDB-GENE-040426-1480
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 Pfam:PF01851 CTD:5708 HOGENOM:HOG000176022
HOVERGEN:HBG001842 KO:K03028 PANTHER:PTHR10943:SF1 EMBL:BC056516
IPI:IPI00507875 RefSeq:NP_956840.1 UniGene:Dr.78209
ProteinModelPortal:Q6PHK7 PRIDE:Q6PHK7 GeneID:393518
KEGG:dre:393518 InParanoid:Q6PHK7 NextBio:20814544 Bgee:Q6PHK7
Uniprot:Q6PHK7
Length = 897
Score = 1332 (473.9 bits), Expect = 1.7e-211, Sum P(2) = 1.7e-211
Identities = 270/583 (46%), Positives = 384/583 (65%)
Query: 46 QQLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETM 105
++LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHY LK Y+ M
Sbjct: 44 EELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYAKLKDIYQNM 103
Query: 106 PDSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYA 165
+ K + AD++SVLA+TMS ERE LKYRLLGS+ ++ SWGHEYVR+LAGE+A+E+
Sbjct: 104 TAGENKHFCADVVSVLAMTMS--NERECLKYRLLGSQEELASWGHEYVRHLAGEVAKEWQ 161
Query: 166 K-RQTDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCL 224
+ + D+A + L++LV+EIV ++M HNAE + + CL
Sbjct: 162 EIEEGDKAQQEVLLKLVKEIVPYNMAHNAEHEACDLLMEIERLDMLDSYIDENAYAKVCL 221
Query: 225 YLTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRK 284
YLTS Y+P P++ +L A I+ KF +P AL++AL L++++ V+ IFTSC D++ +
Sbjct: 222 YLTSCVSYVPEPENSALLKCALNIFRKFNRYPEALRLALMLNDVELVENIFTSCKDIVIQ 281
Query: 285 KQFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPED 344
KQ ++L RHG+ LEL L +I++NV+L+ +L LAR++++MEPK P+D
Sbjct: 282 KQMAFMLGRHGMFLELNEDVEDYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDD 337
Query: 345 IYKAHLLDGR-ASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-W 402
IYK HL + R +G+ VDSAR NLA++FVN FVNA FGQDKL+T GN W
Sbjct: 338 IYKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------EDGNKW 388
Query: 403 LFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRND 462
L+KNK+HG +SAAASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+
Sbjct: 389 LYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNE 448
Query: 463 CDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFS 522
CDPALALLS+YV +RIGAI GLG++YAG+ + + L ++ D+KS ++V +
Sbjct: 449 CDPALALLSDYVLHNSNIMRIGAIFGLGLAYAGSNREDVLSLLLPVMGDSKSSMEVAGVT 508
Query: 523 AISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAE 582
A++ G+I VGSCN +V I+ +M++SE EL + K E++E T
Sbjct: 509 ALACGMIAVGSCNGDVTSTILQTIMEKSEQELKDTCARWLPLGLGLNHLGKGEAIETTLA 568
Query: 583 VSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHE 625
+ E R + + + CAYAG+GNVLKVQ LL C++H +
Sbjct: 569 ALQVVPEPFRSFGNTLVDVCAYAGSGNVLKVQQLLHICSEHFD 611
Score = 735 (263.8 bits), Expect = 1.7e-211, Sum P(2) = 1.7e-211
Identities = 141/239 (58%), Positives = 182/239 (76%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 688
++QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 637 SHQGVAVLGIALIAMGEEIGSEMALRTFGHLLRYGESTLRRAVPLALALISVSNPRLNIL 696
Query: 689 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 748
DTLS+ SHD D EV+ ++ ++GL+GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 697 DTLSKFSHDADPEVSHNSIFAMGLVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 756
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 808
L H+GKG LTL PYHSDR L+S A+AG++T L + LD+K +I+GK HY+LY LV AMQP
Sbjct: 757 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVKNLILGKSHYILYGLVAAMQP 816
Query: 809 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
RML+T DE L+PL PK ITGFQTH+TPVLLA G+RAELATE+
Sbjct: 817 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKAITGFQTHTTPVLLAHGERAELATEE 875
>DICTYBASE|DDB_G0293752 [details] [associations]
symbol:psmD2 "26S proteasome non-ATPase regulatory
subunit 2" species:44689 "Dictyostelium discoideum" [GO:0006972
"hyperosmotic response" evidence=IEP] [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 dictyBase:DDB_G0293752
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234
GenomeReviews:CM000155_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0006972 GO:GO:0004175
GO:GO:0006511 GO:GO:0042176 EMBL:AAFI02000219 GO:GO:0005838
Pfam:PF01851 eggNOG:COG5110 KO:K03028 PANTHER:PTHR10943:SF1
RefSeq:XP_628968.1 STRING:Q54BC6 PRIDE:Q54BC6
EnsemblProtists:DDB0232978 GeneID:8629396 KEGG:ddi:DDB_G0293752
OMA:QWNINEG ProtClustDB:CLSZ2429221 Uniprot:Q54BC6
Length = 893
Score = 1337 (475.7 bits), Expect = 3.2e-210, Sum P(2) = 3.2e-210
Identities = 269/554 (48%), Positives = 369/554 (66%)
Query: 313 ALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATF 372
++ DI+NN KLSE ++ LA D+++ EPK PE+I+++HL D S A DSAR NLA++F
Sbjct: 323 SISDIINNSKLSEYFMNLATDLDIREPKLPEEIFQSHL-D---STSAIADSARMNLASSF 378
Query: 373 VNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQ 432
VNAFVNAGFG+DKLMT D W FKN+E G +S AS GM++LWD+D GL +
Sbjct: 379 VNAFVNAGFGKDKLMTAEEDTK-------WWFKNRELGILSTVASTGMVVLWDIDGGLTK 431
Query: 433 IDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGREDACIRIGAIMGLGIS 492
IDK+ +S + H GAL+ +G++ GIR++ DPAL+LL+E++ + RI AI GLG++
Sbjct: 432 IDKFLYSQEKHCSNGALMAIGMLTSGIRSEMDPALSLLAEHINSSNTGTRISAIFGLGLA 491
Query: 493 YAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSES 552
YAGTQ + LS L+D K ++ I ++LGLI++GSC+ E++ + L+ R +
Sbjct: 492 YAGTQRQDLMSLLSPCLDDDKEKMEFIGIVGLALGLIFIGSCDPELSTLFVQTLIQRGTA 551
Query: 553 ELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLK 612
E KQ++ E E K K +Y +T+ +CAYAGTGNVLK
Sbjct: 552 A-SESHARFLHLGLGLLYLGKQDAAELALETLKAIEGKGGEYARLTVEACAYAGTGNVLK 610
Query: 613 VQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVP 672
VQN+L C+ E + G AVL IA++AM EELG +M +R +HLLQ G +I+RA+P
Sbjct: 611 VQNMLHFCSDGQEN--PHHGLAVLSIALIAMGEELGSDMCLRMFDHLLQKGNVHIKRAIP 668
Query: 673 LALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSY 732
LALGLL SNP++ +MD LS+LSHD D EVA A++SLGLIG+GTNNARI GMLR L+ +
Sbjct: 669 LALGLLSPSNPRIAIMDILSKLSHDNDPEVAQGAILSLGLIGAGTNNARIGGMLRALAVF 728
Query: 733 YYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIV 792
Y KD +L F VRIAQGL+H+GKG +T+NPYHSDR L+SP A+ G++ L A LD+K ++
Sbjct: 729 YGKDVHLFF-VRIAQGLLHLGKGTMTINPYHSDRTLMSPVAVGGLLALLHAGLDIKNILS 787
Query: 793 GKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTP 852
+ HY+ + +V +M PRML+T+DE+LKPL PKTITGFQTH+TP
Sbjct: 788 TQSHYLFFSIVCSMYPRMLMTLDEDLKPLPVSVRVGQSVDIVGLAGKPKTITGFQTHTTP 847
Query: 853 VLLAAGDRAELATE 866
VLL +RAELAT+
Sbjct: 848 VLLGYNERAELATD 861
Score = 718 (257.8 bits), Expect = 3.2e-210, Sum P(2) = 3.2e-210
Identities = 155/347 (44%), Positives = 219/347 (63%)
Query: 48 LELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMPD 107
LEL VER +D + ALE+++TEIR+STSSMTSVPKPLKFLR HY TL Y+ +
Sbjct: 66 LELLVERSRDEKEEIALAALEALKTEIRSSTSSMTSVPKPLKFLRNHYSTLVDIYKNSKE 125
Query: 108 SDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAKR 167
K +ADILSVLA+ + ER++LKY+LLGS I SWGHEYV++LA EI EY +
Sbjct: 126 GKAKTSLADILSVLAMA-NGNDERDTLKYKLLGSGEAIASWGHEYVKHLATEIGVEYDIK 184
Query: 168 QTDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLT 227
+ + S++DL++LV EIV F M HNAEP N+ R CLYL
Sbjct: 185 KEENQSVEDLLKLVDEIVPFQMTHNAEPEACDLLLEVEQLSKIFQYIDENNYSRVCLYLF 244
Query: 228 SAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLR-KKQ 286
+ Y+PGPDD+ +L + IY+K +++P+AL++A+ + + + + +IF ++ +Q
Sbjct: 245 KCSYYVPGPDDINILKVCVEIYIKMKQYPDALRVAMKISDPELITEIFKLVENNKSILQQ 304
Query: 287 FCYILARHGITLELXXXXXXXXXXRY-ALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDI 345
+++AR I + Y ++ DI+NN KLSE ++ LA D+++ EPK PE+I
Sbjct: 305 LGFLVARQKIVPD---------NFNYDSISDIINNSKLSEYFMNLATDLDIREPKLPEEI 355
Query: 346 YKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSD 392
+++HL D S A DSAR NLA++FVNAFVNAGFG+DKLMT D
Sbjct: 356 FQSHL-D---STSAIADSARMNLASSFVNAFVNAGFGKDKLMTAEED 398
>FB|FBgn0028695 [details] [associations]
symbol:Rpn1 "Regulatory particle non-ATPase 1" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 EMBL:AE014296 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008283 GO:GO:0006508 GO:GO:0050790
GO:GO:0004175 GO:GO:0042176 GO:GO:0000022 GO:GO:0008540
BRENDA:3.4.25.1 Pfam:PF01851 eggNOG:COG5110
GeneTree:ENSGT00550000074983 KO:K03028 OMA:IAQGLTH
PANTHER:PTHR10943:SF1 CTD:6184 EMBL:AF132182 EMBL:AF145304
RefSeq:NP_649158.1 UniGene:Dm.3192 IntAct:Q9VW54 MINT:MINT-294744
STRING:Q9VW54 EnsemblMetazoa:FBtr0074893 GeneID:40174
KEGG:dme:Dmel_CG7762 UCSC:CG7762-RA FlyBase:FBgn0028695
InParanoid:Q9VW54 OrthoDB:EOG4R228T GenomeRNAi:40174 NextBio:817408
Uniprot:Q9VW54
Length = 919
Score = 1215 (432.8 bits), Expect = 3.8e-194, Sum P(2) = 3.8e-194
Identities = 254/591 (42%), Positives = 370/591 (62%)
Query: 46 QQLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETM 105
++LEL V+ +Q+PD L + LESM IR ST+SMTSVPKPLKF+RPHY T+K Y+ M
Sbjct: 52 EELELLVQHLQEPDAKLYQPTLESMAKLIRASTTSMTSVPKPLKFMRPHYETMKTVYKHM 111
Query: 106 PDSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGD-IGSWGHEYVRNLAGEIAQEY 164
P+ ++ ADI+SVL++TM + G ++ L YR L IG WGHEYVR+L+GEI+ Y
Sbjct: 112 PNEQARQLCADIISVLSMTMGS-G-KDCLAYRFLCDRKQRIGDWGHEYVRHLSGEISAHY 169
Query: 165 AKRQTDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCL 224
T + + L+ELV++I+ ++M+HNAE + + R CL
Sbjct: 170 HDT-TGDFRVQ-LIELVKQIIPYNMEHNAEADACDLLIEIDHLHLLSDFVDESAYPRVCL 227
Query: 225 YLTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRK 284
YL S Y+P PD+ ++L+ A + KF ++ A+++AL L++M + +IF + +
Sbjct: 228 YLQSCYPYVPDPDNTIILETALQLSRKFNQYTQAMRLALMLNDMDKIGEIFKEPKEPAMQ 287
Query: 285 KQFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPED 344
KQ ++LAR I LEL L +I++N L++ +L LAR++++MEPK+PED
Sbjct: 288 KQLAFMLARQQICLELDELVPDYDD----LMEIMSNANLNKHFLNLARELDIMEPKTPED 343
Query: 345 IYKAHLLDGRAS-AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWL 403
IYK+HL + R+ A VDSA+QNLAA+FVN FVNAGFG DKL+ S G+ WL
Sbjct: 344 IYKSHLDNSRSRFASIQVDSAKQNLAASFVNGFVNAGFGVDKLL------SEDGNK--WL 395
Query: 404 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDC 463
+KNKEHG +SA ASLG+ILLWDVD GL IDKY +STD+++ +GALL GIVNCGIRN+
Sbjct: 396 YKNKEHGMLSATASLGLILLWDVDGGLTMIDKYLYSTDDNIKSGALLACGIVNCGIRNEV 455
Query: 464 DPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTIL-----NDAKSPLDV 518
DPA ALLS+Y+ +++C+R+GAI+GLGI+YAG+ + L T+ N + + +++
Sbjct: 456 DPAHALLSDYIDNQNSCMRVGAILGLGIAYAGSNRSIVIDTLKTVFSFGSNNKSSASVEI 515
Query: 519 IAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVE 578
+ +A+SLGLI VGSCN E+ + ++ +M ++++L + +Q+S E
Sbjct: 516 LGITALSLGLISVGSCNSEITEILLQTIMGLTKADLKDTYTRFLFLGLGLLYLGRQKSTE 575
Query: 579 ATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEA 629
A + E R + CAYAGTGNVLK+Q LL C+ H+E A
Sbjct: 576 AVMMTLEVLEEPYRSMATTMVDICAYAGTGNVLKIQQLLHICSDHYETSSA 626
Score = 688 (247.2 bits), Expect = 3.8e-194, Sum P(2) = 3.8e-194
Identities = 139/247 (56%), Positives = 181/247 (73%)
Query: 622 QHHEKG-EAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCI 680
+ EK A Q AVLGIA++AM E++G EMA RS +LL+Y E IRRAVPLALGL+
Sbjct: 651 KEREKDLSATQSIAVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAIRRAVPLALGLISA 710
Query: 681 SNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLL 740
SNPK+N++DTLS+ SHD+D+EVA A+ ++GL+G+GTNNAR+A MLR L+ Y+ KD + L
Sbjct: 711 SNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLASMLRQLAQYHSKDPSNL 770
Query: 741 FCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLY 800
F VRIAQ L H+GKG L+L+PYHSDR L++P A+AG++ TL + LD+K +I+ + HY+LY
Sbjct: 771 FMVRIAQSLTHLGKGTLSLSPYHSDRQLMNPMAVAGLMATLVSLLDVKNLILNRSHYLLY 830
Query: 801 FLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDR 860
LV AMQ RML+T DE L L PKTITGFQTH+TPVLLA G+R
Sbjct: 831 TLVPAMQARMLITFDEELNQLQVPVRVGIAIDVVGQAGKPKTITGFQTHTTPVLLAIGER 890
Query: 861 AELATEK 867
AELAT++
Sbjct: 891 AELATDE 897
>UNIPROTKB|E7EW34 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC078797 Pfam:PF01851
PANTHER:PTHR10943:SF1 HGNC:HGNC:9559 ChiTaRS:PSMD2 IPI:IPI00926258
ProteinModelPortal:E7EW34 PRIDE:E7EW34 Ensembl:ENST00000439383
ArrayExpress:E7EW34 Bgee:E7EW34 Uniprot:E7EW34
Length = 778
Score = 1118 (398.6 bits), Expect = 1.3e-189, Sum P(2) = 1.3e-189
Identities = 224/507 (44%), Positives = 326/507 (64%)
Query: 125 MSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAKRQ-TDEASIDDLMELVQE 183
M+ GERE LKYRL+GS+ ++ SWGHEYVR+LAGE+A+E+ + ++ + L+ LV+E
Sbjct: 1 MTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKVQREPLLTLVKE 60
Query: 184 IVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVLD 243
IV ++M HNAE + + CLYLTS Y+P P++ +L
Sbjct: 61 IVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLR 120
Query: 244 IAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGITLELXXX 303
A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +KQ ++L RHG+ LEL
Sbjct: 121 CALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSED 180
Query: 304 XXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-ASAGASVD 362
L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R +G+ VD
Sbjct: 181 VEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGSQVD 236
Query: 363 SARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAAASLGMI 421
SAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAAASLGMI
Sbjct: 237 SARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAAASLGMI 287
Query: 422 LLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGREDACI 481
LLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV +
Sbjct: 288 LLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTM 347
Query: 482 RIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQA 541
R+G+I GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN +V
Sbjct: 348 RLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTST 407
Query: 542 IIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLS 601
I+ +M++SE+EL + K E++EA + +E R + + +
Sbjct: 408 ILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDV 467
Query: 602 CAYAGTGNVLKVQNLLGHCAQHHEKGE 628
CAYAG+GNVLKVQ LL C++H + E
Sbjct: 468 CAYAGSGNVLKVQQLLHICSEHFDSKE 494
Score = 742 (266.3 bits), Expect = 1.3e-189, Sum P(2) = 1.3e-189
Identities = 142/239 (59%), Positives = 183/239 (76%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 688
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 518 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 577
Query: 689 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 748
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 578 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 637
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 808
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 638 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 697
Query: 809 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE+
Sbjct: 698 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEE 756
>POMBASE|SPBP19A11.03c [details] [associations]
symbol:mts4 "19S proteasome regulatory subunit Mts4"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
PomBase:SPBP19A11.03c INTERPRO:IPR002015 GO:GO:0005829
GO:GO:0005634 GO:GO:0007346 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0043161 EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR
GO:GO:0042176 GO:GO:0008540 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EMBL:Y09819 PIR:T52488 RefSeq:NP_596171.1 ProteinModelPortal:P87048
IntAct:P87048 STRING:P87048 EnsemblFungi:SPBP19A11.03c.1
GeneID:2541268 KEGG:spo:SPBP19A11.03c OrthoDB:EOG4P8JSC
NextBio:20802380 Uniprot:P87048
Length = 891
Score = 1782 (632.4 bits), Expect = 1.1e-183, P = 1.1e-183
Identities = 368/825 (44%), Positives = 515/825 (62%)
Query: 48 LELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMPD 107
LEL V+ VQD P L +L ++ IRTSTSSMT+VPKPLKFLRPHY TL Y++ P
Sbjct: 57 LELLVQAVQDATPELVGSSLTQLKEIIRTSTSSMTAVPKPLKFLRPHYFTLVKIYDSWPQ 116
Query: 108 SDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAKR 167
S K +ADILSVL ++ S + ESLKYRL G D WGHEYVR+LA EI +E+A R
Sbjct: 117 SPQKTQLADILSVLGMSYSNTSKHESLKYRLQGVTTDPSLWGHEYVRHLASEIEEEFASR 176
Query: 168 QTDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLT 227
Q +EA DDLMEL IV F + HNAE N R CLY+T
Sbjct: 177 QEEEAPTDDLMELALTIVPFFLTHNAEADAIDLLQELGAIEKVVPFVELDNASRVCLYIT 236
Query: 228 SAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQF 287
S LP P+D+ +L A+ IY KF++ AL +A+ LD+M +K+ + D L KKQ
Sbjct: 237 SCVNLLPFPEDVAMLRTAHAIYRKFDQLTQALNVAIRLDDMSLIKEDCEAATDPLLKKQM 296
Query: 288 CYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYK 347
Y+LAR I +++ L D +NN LS+ + L +++ +M+PK PEDI+K
Sbjct: 297 SYMLARQQIPMDMGDEE---------LNDALNNTHLSDHFHYLGKELNLMDPKVPEDIFK 347
Query: 348 AHLLDGRASAGAS-VDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKN 406
HL R GAS V SA+QNLA TFVNA VNAG+ D+L+ V + +S W++KN
Sbjct: 348 THLEVARTGLGASGVYSAKQNLANTFVNALVNAGYSNDRLILVDDEKTS------WIYKN 401
Query: 407 KEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPA 466
KE G +SA AS+G++ LW+VD GL+ +DKY +S++ + AGALLG+G+ N +RN+ DPA
Sbjct: 402 KESGLISATASIGLLQLWNVDMGLSLLDKYLYSSEENTKAGALLGIGVTNVAVRNEADPA 461
Query: 467 LALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISL 526
+A+LSEY+ +R AI+GLG++Y+G + + LS I+ D P+ + +A+SL
Sbjct: 462 MAILSEYLETGSVKLRASAILGLGLAYSGANREDLLDMLSPIVTDTDCPMQLSCLAALSL 521
Query: 527 GLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKT 586
GLI+VG+CN +VA I+ LM+R ES + KQ+ +AT E K
Sbjct: 522 GLIFVGTCNGDVASTILQTLMEREESAQNDQWGRFMALGLALLFNGKQDLADATVETLKA 581
Query: 587 FNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQH-----HEKGEAYQGPAVLGIAMV 641
KI + ++ + C+YAGTGNVL +Q LL C++ E Q A LG+A +
Sbjct: 582 IEGKIARQAEILVDICSYAGTGNVLHIQKLLHICSEPPSDDAKESETTIQTFAALGVATI 641
Query: 642 AMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSE 701
AM E++G EM +R +H++ YGE +IR+A+PLALGLL SNP++ + DTLSR SHD D +
Sbjct: 642 AMGEDIGAEMVLRHFDHMMHYGEPSIRKAIPLALGLLSASNPQMRIFDTLSRYSHDNDLD 701
Query: 702 VAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNP 761
VA A+ ++GL+G+GT+NAR+A +LR L+SYY+K++N LF VRIAQGL+++GKG +TLNP
Sbjct: 702 VAYNAIFAMGLVGAGTSNARLAQLLRQLASYYHKESNALFMVRIAQGLLYLGKGTMTLNP 761
Query: 762 YHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPL 821
YH++R +L TA AG++T + A LD ++ H++LY + LA++PRML+T+ E+ + L
Sbjct: 762 YHTERQILGQTAFAGLMTVVLAMLDANTFVLDTSHWLLYAITLAIRPRMLITLGEDGQYL 821
Query: 822 SXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATE 866
PK ITG+ TH+TPVLL +RAELATE
Sbjct: 822 PVSVRVGQAVDVVGQAGRPKVITGWVTHTTPVLLHHNERAELATE 866
>WB|WBGene00004458 [details] [associations]
symbol:rpn-1 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0002119 GO:GO:0000003
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 EMBL:FO080211
Pfam:PF01851 eggNOG:COG5110 GeneTree:ENSGT00550000074983
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
PIR:T32707 RefSeq:NP_501064.1 ProteinModelPortal:Q9GZH5
IntAct:Q9GZH5 MINT:MINT-210711 STRING:Q9GZH5 PaxDb:Q9GZH5
EnsemblMetazoa:T22D1.9.1 EnsemblMetazoa:T22D1.9.2 GeneID:177455
KEGG:cel:CELE_T22D1.9 UCSC:T22D1.9.1 CTD:177455 WormBase:T22D1.9
InParanoid:Q9GZH5 NextBio:896900 Uniprot:Q9GZH5
Length = 981
Score = 1119 (399.0 bits), Expect = 2.3e-181, Sum P(2) = 2.3e-181
Identities = 238/591 (40%), Positives = 358/591 (60%)
Query: 46 QQLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETM 105
+ L L V+R+ +PD L K +LE+MRT IR ST+SMTSVPKPLKF+RPHY +K + ++
Sbjct: 42 EDLNLLVQRLSEPDTTLYKPSLETMRTLIRASTTSMTSVPKPLKFMRPHYNKMKEIFTSI 101
Query: 106 PDSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYA 165
D+KK ADI+SVLA+T ++ +++ YR+LGS IG WGHEYVR+LA E+++E+
Sbjct: 102 VAPDVKKLCADIISVLAMT--SDERTDTINYRILGSHEPIGDWGHEYVRHLAMEMSEEWK 159
Query: 166 KRQTDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLY 225
K T +A +L++L Q+IV+ HMKHNAE + +R CLY
Sbjct: 160 KEGTSDARKAELLKLTQDIVSHHMKHNAEVEACDLLIEIERIDLLISYVQEVDHQRVCLY 219
Query: 226 LTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 285
L S A P PD+++++ A +YLKF + A++ A+ ++++ V QIF D L +K
Sbjct: 220 LLSCAPLTPDPDNIILIRTALQLYLKFNRYLEAVRCAIMVNDIPQVHQIFAKASDPLLRK 279
Query: 286 QFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDI 345
Q +L RH I L+ AL ++ +N L E + +LAR++++MEPK+PE I
Sbjct: 280 QMAILLGRHQIFLDYEGSADSD-----ALAELNSNAHLYEYFHSLARELDIMEPKTPEGI 334
Query: 346 YKAHLLDGRASAG-ASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLF 404
YK+HL R A DS R NLAA VN FVN GFG DK+M +AS W +
Sbjct: 335 YKSHLEHSRPFGNSAQPDSTRMNLAAALVNGFVNCGFGVDKMMAETEEAS------RWFY 388
Query: 405 KNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCD 464
KNKE+G ++AAAS G+I WD+D+GLAQ D++ + D+++ AG LL +GI++ GI++ CD
Sbjct: 389 KNKEYGMLTAAASQGLIWRWDIDTGLAQCDRFLYINDDYIKAGTLLAIGIISSGIQDACD 448
Query: 465 PALALLSEYVGREDACIRIGAIMGLGISYAG------TQNDQ--IRHKLSTILNDAK-SP 515
PA ALL ++V + + +R+G+I+GLG++YA T+N++ + +L +L+D K S
Sbjct: 449 PASALLLDHVQSDRSIMRVGSILGLGLAYANSKRETVTKNEERGVIFELKKVLSDQKPSA 508
Query: 516 L-DVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQ 574
+ +V + +SLGLI VG+ + E A ++ ALMD+SE+EL +P Q
Sbjct: 509 IPEVKGLAGLSLGLILVGTADAEAAMEMLQALMDKSETELTDPNMRFLALGIALIFLQTQ 568
Query: 575 ESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHE 625
+ + E ++ + + CAYAGTGNVLK+Q LL C++H+E
Sbjct: 569 DKSDVFVESLRSLPDPFGAMVSTLVEVCAYAGTGNVLKIQKLLHLCSEHYE 619
Score = 663 (238.4 bits), Expect = 2.3e-181, Sum P(2) = 2.3e-181
Identities = 132/244 (54%), Positives = 178/244 (72%)
Query: 631 QGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDT 690
Q AVLGI ++AM +++G +MA+R HL++YGE IRRAVPLAL LL +SNP++N+++T
Sbjct: 709 QAVAVLGIGLIAMGDDIGSQMALRMFGHLIRYGEPVIRRAVPLALSLLSVSNPQLNILET 768
Query: 691 LSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLV 750
LS+ SHD+D++ A A+ ++GL+G+GTNNAR+ MLRNL+SY+YKD L VRIAQGL
Sbjct: 769 LSKFSHDSDADTAHNAIFAMGLVGAGTNNARLVAMLRNLASYHYKDQVSLMLVRIAQGLT 828
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVG-KYHYVLYFLVLAMQPR 809
H+GKG +TLNP+HSDR LLSP+ALA +++ F+ LD I+ + HY+LY LVLAMQPR
Sbjct: 829 HLGKGTMTLNPWHSDRQLLSPSALASLLSICFSFLDANNTILNNRQHYLLYTLVLAMQPR 888
Query: 810 MLLT-VDENLKP-----LSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAEL 863
ML T V++ +KP L+ PKTITGFQTH+TPVLLA G+RAEL
Sbjct: 889 MLTTLVEDEMKPGSLKQLNVSVRVGQAVDVVAQAGKPKTITGFQTHTTPVLLAHGERAEL 948
Query: 864 ATEK 867
A ++
Sbjct: 949 ANDE 952
>ASPGD|ASPL0000062698 [details] [associations]
symbol:AN10020 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
EMBL:BN001308 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
Pfam:PF01851 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EnsemblFungi:CADANIAT00002622 Uniprot:C8VQJ9
Length = 906
Score = 1722 (611.2 bits), Expect = 2.5e-177, P = 2.5e-177
Identities = 353/830 (42%), Positives = 517/830 (62%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+Q+PD L AL++++T I+TSTSSMT+VPKPLKFLRPHY L A Y+
Sbjct: 61 ELEMLVERLQEPDTSLYGPALDAIKTFIKTSTSSMTAVPKPLKFLRPHYDDLAALYDKWS 120
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAK 166
K +AD+LSVL +T E + E+LKYRLL D+GSWGHEYVR+LA EI QEY
Sbjct: 121 AGATKDSLADMLSVLGMTYGDEEKLETLKYRLLTKSDDLGSWGHEYVRHLALEIGQEYQN 180
Query: 167 RQTDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYL 226
R DE +DDL++L +V + ++HNAE + R CLY+
Sbjct: 181 RVNDEKEVDDLIKLAVSLVPYFLRHNAEADAVDLMSELEIIEEIPQFVDENTYSRVCLYM 240
Query: 227 TSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQ 286
S L P+D L A+ IY++++E A+ +A+ L+++ +K + D KKQ
Sbjct: 241 VSMVPLLTYPEDHQFLRTAHEIYVRYKELTKAIVLAIRLNDVDLIKSDLEATSDRSLKKQ 300
Query: 287 FCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIY 346
++++R I L+ + +NN + + + +L +++ +++P PEDIY
Sbjct: 301 MAFLVSRQQIWLD----DLGDDEQDETFMECLNNTSIPKHFKSLGKELNILDPIMPEDIY 356
Query: 347 KAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKN 406
K HL R + +VDSAR NLA+ FVNAF NAGFG D++M V D G+W++K
Sbjct: 357 KTHLESSRGAGLTNVDSARHNLASAFVNAFANAGFGNDEMMIVEGD------KGSWVWKT 410
Query: 407 KEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPA 466
K+ G +S AS+GM+L DVD+GL +IDKY +++++ + AGALL +GI+N G+R D DPA
Sbjct: 411 KDDGMLSTTASMGMLLHRDVDTGLDKIDKYTYASEDQIKAGALLSIGILNSGVRLDSDPA 470
Query: 467 LALL--SEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAI 524
LALL +E + ++ +R+ IMGLG++YAG+ +I L I+ D + + A +A+
Sbjct: 471 LALLCDNENLEAKNIPMRVATIMGLGLAYAGSNKQEILDALLPIVEDVSLDMQLSAMAAV 530
Query: 525 SLGLIYVGSCNEEVAQAIIFALMDRS-ESELGEPXXXXXXXXXXXXXXXKQESVEATAEV 583
SLGL++VGS N +V++AI LMD + +L + +QE V+ ++
Sbjct: 531 SLGLVFVGSSNHQVSEAIATTLMDEERQKQLKDKWTRFMALGLALLYFGRQEEVDVILDI 590
Query: 584 SKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGP------AVLG 637
K + + K + CA+AGTG VLK+Q LL C E+ + QG AVLG
Sbjct: 591 LKAVDHPMAKPTSVLASVCAWAGTGTVLKLQELLHICNDVIEESDEKQGEELVQSYAVLG 650
Query: 638 IAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHD 697
++++AM E++G +M +R HL+ YG NIR+AVPLA+GL+ SNP++ V DTLSR SHD
Sbjct: 651 LSLIAMGEDVGQDMILRQFGHLMHYGASNIRKAVPLAMGLISPSNPQMKVYDTLSRYSHD 710
Query: 698 TDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLL 757
D++VA+ A+ ++GL G+GT N+R+A +LR L+SYY++D N LF VRIAQGL+HMGKG +
Sbjct: 711 NDNDVAINAIFAMGLCGAGTKNSRLAQLLRQLASYYHRDQNSLFMVRIAQGLLHMGKGTM 770
Query: 758 TLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDEN 817
TLNP+H+DR +LS + AG++T L + +D K I+ ++HY+LYFL+ AM PR L+T+DE+
Sbjct: 771 TLNPFHTDRQVLSRVSAAGLLTVLVSLIDAKQFILAEHHYLLYFLITAMYPRFLVTLDED 830
Query: 818 LKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
L+PL PKTITG+QT STPVLL+ G+RAEL EK
Sbjct: 831 LQPLPVNVRVGQAVDVVGQAGRPKTITGWQTQSTPVLLSYGERAELEDEK 880
>UNIPROTKB|E9PCS3 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC078797 Pfam:PF01851
PANTHER:PTHR10943:SF1 HGNC:HGNC:9559 ChiTaRS:PSMD2 IPI:IPI00926410
ProteinModelPortal:E9PCS3 PRIDE:E9PCS3 Ensembl:ENST00000435761
UCSC:uc011brj.1 ArrayExpress:E9PCS3 Bgee:E9PCS3 Uniprot:E9PCS3
Length = 749
Score = 998 (356.4 bits), Expect = 6.5e-177, Sum P(2) = 6.5e-177
Identities = 202/477 (42%), Positives = 301/477 (63%)
Query: 155 NLAGEIAQEYAKRQ-TDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXX 213
+++GE+A+E+ + ++ + L+ LV+EIV ++M HNAE
Sbjct: 2 SMSGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKD 61
Query: 214 XXATNFKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQ 273
+ + CLYLTS Y+P P++ +L A ++ KF FP AL++AL L++M+ V+
Sbjct: 62 IDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVED 121
Query: 274 IFTSCDDLLRKKQFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARD 333
IFTSC D++ +KQ ++L RHG+ LEL L +I++NV+L+ +L LAR+
Sbjct: 122 IFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARE 177
Query: 334 IEVMEPKSPEDIYKAHLLDGR-ASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSD 392
+++MEPK P+DIYK HL + R +G+ VDSAR NLA++FVN FVNA FGQDKL+T
Sbjct: 178 LDIMEPKVPDDIYKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---- 233
Query: 393 ASSGGSSGN-WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLG 451
GN WL+KNK+HG +SAAASLGMILLWDVD GL QIDKY +S+++++ +GALL
Sbjct: 234 -----DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLA 288
Query: 452 VGIVNCGIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILND 511
GIVN G+RN+CDPALALLS+YV +R+G+I GLG++YAG+ + + L ++ D
Sbjct: 289 CGIVNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGD 348
Query: 512 AKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXX 571
+KS ++V +A++ G+I VGSCN +V I+ +M++SE+EL +
Sbjct: 349 SKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHL 408
Query: 572 XKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 628
K E++EA + +E R + + + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 409 GKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 465
Score = 742 (266.3 bits), Expect = 6.5e-177, Sum P(2) = 6.5e-177
Identities = 142/239 (59%), Positives = 183/239 (76%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 688
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 489 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 548
Query: 689 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 748
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 549 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 608
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 808
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 609 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 668
Query: 809 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE+
Sbjct: 669 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEE 727
>UNIPROTKB|F1P4P8 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 Pfam:PF01851 GeneTree:ENSGT00550000074983 OMA:IAQGLTH
PANTHER:PTHR10943:SF1 EMBL:AADN02020694 IPI:IPI00592623
Ensembl:ENSGALT00000039840 ArrayExpress:F1P4P8 Uniprot:F1P4P8
Length = 733
Score = 1356 (482.4 bits), Expect = 2.5e-164, Sum P(2) = 2.5e-164
Identities = 275/585 (47%), Positives = 387/585 (66%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M
Sbjct: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAK 166
+ K++ ADI+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYVR+LAGE+A+E+ +
Sbjct: 115 PGENKRFAADIISVLAMTMS--GERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQE 172
Query: 167 -RQTDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLY 225
+ D+A D L+ LV+EIV ++M HNAE + + CLY
Sbjct: 173 IDEADKAQRDTLLTLVKEIVPYNMAHNAEHEACDLLMEIEQMDMLEKYIDDNAYSKVCLY 232
Query: 226 LTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 285
LTS Y+P P++ +L A I+ KF +P AL++AL L++++ V+ IFTSC D++ +K
Sbjct: 233 LTSCVSYVPEPENSALLRCALGIFRKFNRYPEALRLALMLNDVELVEDIFTSCKDVVVQK 292
Query: 286 QFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDI 345
Q ++L RHG+ LEL L +I++NV+L+ +L LAR++++MEPK P+DI
Sbjct: 293 QMAFMLGRHGVFLELNEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDI 348
Query: 346 YKAHLLDGR-ASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WL 403
YK HL + R +G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL
Sbjct: 349 YKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWL 399
Query: 404 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDC 463
+KNK+HG +SAAASLG ILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+C
Sbjct: 400 YKNKDHGMLSAAASLGTILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNEC 459
Query: 464 DPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSA 523
DPALALLS+YV +RIGAI GLG++YAG+ + + L ++ D+KS ++V +A
Sbjct: 460 DPALALLSDYVLHNSNTMRIGAIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTA 519
Query: 524 ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEV 583
++ G+I VGSCN +V I+ +M++SE+EL E K E++EA
Sbjct: 520 LACGMISVGSCNGDVTSTILQTIMEKSETELKETYARWLPLGLGLNHLGKGEAIEAILAA 579
Query: 584 SKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 628
+ +E R + + + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 580 LEVVSEPFRSFANTLVDICAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 265 (98.3 bits), Expect = 2.5e-164, Sum P(2) = 2.5e-164
Identities = 50/88 (56%), Positives = 71/88 (80%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 688
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 689 DTLSRLSHDTDSEVAMAAVISLGLIGSG 716
DTLS+ HD D EV+ ++ +G++GSG
Sbjct: 708 DTLSKF-HDADPEVSYNSIF-VGMVGSG 733
>CGD|CAL0006334 [details] [associations]
symbol:RPN1 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 CGD:CAL0006334
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 EMBL:AACQ01000010 GO:GO:0042176 Pfam:PF01851
eggNOG:COG5110 KO:K03028 PANTHER:PTHR10943:SF1 RefSeq:XP_722167.1
STRING:Q5AL21 GeneID:3636147 KEGG:cal:CaO19.4956 Uniprot:Q5AL21
Length = 994
Score = 1003 (358.1 bits), Expect = 3.1e-164, Sum P(2) = 3.1e-164
Identities = 223/584 (38%), Positives = 329/584 (56%)
Query: 47 QLELYVERVQDP--DPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYET 104
+LEL VER+ +P D L L++++T I+ ST+SMT+VPKPLKFLRPHY +L Y
Sbjct: 46 ELELLVERLNEPNQDRALYNKYLDALKTFIKESTTSMTAVPKPLKFLRPHYPSLTELYTN 105
Query: 105 MPDSDLKK-----YMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGE 159
+ K +ADILSVLA T S EG R+SLKYRLL S+ I WGHEY+R+LA E
Sbjct: 106 WSNQFSAKDVIVIKLADILSVLATTYSDEGNRDSLKYRLLASDDTISDWGHEYMRHLALE 165
Query: 160 IAQEYAKRQ-TDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATN 218
I + + + DE ++ L++L +IV F +KHNAE
Sbjct: 166 IGESFQENLGVDEELVNKLVKLALQIVPFFLKHNAEADAVDLLLEIECIDKLPQFVDENT 225
Query: 219 FKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSC 278
F R CLY+TS YL PDD+ L+ AY IYL + AL +A+ LD+ + +KQ+F S
Sbjct: 226 FARVCLYVTSCVPYLAPPDDVSFLNTAYSIYLSHNQLTQALTLAIKLDDNELIKQVFDST 285
Query: 279 DDLLRKKQFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVME 338
D KQ +IL++ + +Q+ ++NVKL+E + L +++ +++
Sbjct: 286 TDESLHKQLGFILSQQNSNFKYPGENPE-------VQECISNVKLAEYFQYLVKELNLLD 338
Query: 339 PKSPEDIYKAHLLDGRASAGAS--VDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSG 396
PK PED+YK+HL + + G S +DSA+QNLAA+FVN F+N GFG DKL+ D S
Sbjct: 339 PKVPEDVYKSHLENSKFGLGTSGSIDSAKQNLAASFVNGFLNLGFGNDKLVQTEEDNKS- 397
Query: 397 GSSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVN 456
W+++ K G S ASLG I W+++ GL +DKY +S D+ V AGALLG G+V+
Sbjct: 398 -----WIYRTKGSGMASTTASLGSIHQWNINEGLQVLDKYTYSEDSEVKAGALLGTGVVS 452
Query: 457 CGIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPL 516
+ ++ D A ALL EYV + + AI GLGI++AG+ N+ + + L +++D L
Sbjct: 453 ANVHDEVDAAFALLQEYVHEPNKLYQTAAINGLGIAFAGSANEDVLNLLLPLVSDLDISL 512
Query: 517 DVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQES 576
++ +A++LG I+VG+C+ +V I+ L++R ++L + E
Sbjct: 513 EISCLAALALGHIFVGTCHGDVTSTILQTLLERDYTQLTNKFIKFMSLGLGLLYMGRTEQ 572
Query: 577 VEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHC 620
E E I K + + CA+AGTGNVL++Q LL C
Sbjct: 573 AEDVLETIDAIEHPISKTLKVLVNICAFAGTGNVLQIQALLQMC 616
Score = 617 (222.3 bits), Expect = 3.1e-164, Sum P(2) = 3.1e-164
Identities = 127/250 (50%), Positives = 171/250 (68%)
Query: 625 EKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPK 684
E+ E YQG AVLG+A +AM E++G +M++R HL+ YG IRRAVPLA+GL+ SNP+
Sbjct: 721 EEEELYQGIAVLGLACIAMGEDIGQDMSLRHFGHLMHYGNSLIRRAVPLAMGLVSTSNPQ 780
Query: 685 VNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVR 744
+ V +TLSR SHD D EVA ++ S+GL+G+GTNNAR+A +LR L+SYY K + LF VR
Sbjct: 781 MKVFETLSRYSHDPDLEVAQNSIYSMGLVGAGTNNARLAQLLRQLASYYIKSPDTLFMVR 840
Query: 745 IAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKY-----HYVL 799
IAQG++H+GKG LTL PY+S+R +LS +LA ++T A LD ++ I+ H +L
Sbjct: 841 IAQGILHLGKGTLTLTPYNSERTILSKVSLASLLTIAIALLDPRSFILNDSTTETTHQLL 900
Query: 800 YFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGD 859
Y+L A++PRML+TVDE LKP+ PKTITG+ T STPVLL G+
Sbjct: 901 YYLTPAVKPRMLVTVDEELKPIKVNVRVGQAVDVVGQAGKPKTITGWVTQSTPVLLNYGE 960
Query: 860 RAELATEKSD 869
RAEL E +D
Sbjct: 961 RAEL--ENTD 968
Score = 43 (20.2 bits), Expect = 1.5e-61, Sum P(2) = 1.5e-61
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 157 AG-EIAQEYAKRQTDEASIDDLMELVQEI 184
AG E AQE + DE ID+ EL Q I
Sbjct: 701 AGDEKAQEGGDDKEDEEEIDEEEELYQGI 729
>UNIPROTKB|E1BX02 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 Pfam:PF01851
GeneTree:ENSGT00550000074983 PANTHER:PTHR10943:SF1
EMBL:AADN02020694 IPI:IPI00821592 Ensembl:ENSGALT00000010167
ArrayExpress:E1BX02 Uniprot:E1BX02
Length = 685
Score = 1356 (482.4 bits), Expect = 9.5e-150, Sum P(2) = 9.5e-150
Identities = 275/585 (47%), Positives = 387/585 (66%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M
Sbjct: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAK 166
+ K++ ADI+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYVR+LAGE+A+E+ +
Sbjct: 115 PGENKRFAADIISVLAMTMS--GERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQE 172
Query: 167 -RQTDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLY 225
+ D+A D L+ LV+EIV ++M HNAE + + CLY
Sbjct: 173 IDEADKAQRDTLLTLVKEIVPYNMAHNAEHEACDLLMEIEQMDMLEKYIDDNAYSKVCLY 232
Query: 226 LTSAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 285
LTS Y+P P++ +L A I+ KF +P AL++AL L++++ V+ IFTSC D++ +K
Sbjct: 233 LTSCVSYVPEPENSALLRCALGIFRKFNRYPEALRLALMLNDVELVEDIFTSCKDVVVQK 292
Query: 286 QFCYILARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDI 345
Q ++L RHG+ LEL L +I++NV+L+ +L LAR++++MEPK P+DI
Sbjct: 293 QMAFMLGRHGVFLELNEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDI 348
Query: 346 YKAHLLDGR-ASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WL 403
YK HL + R +G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL
Sbjct: 349 YKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWL 399
Query: 404 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDC 463
+KNK+HG +SAAASLG ILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+C
Sbjct: 400 YKNKDHGMLSAAASLGTILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNEC 459
Query: 464 DPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSA 523
DPALALLS+YV +RIGAI GLG++YAG+ + + L ++ D+KS ++V +A
Sbjct: 460 DPALALLSDYVLHNSNTMRIGAIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTA 519
Query: 524 ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEV 583
++ G+I VGSCN +V I+ +M++SE+EL E K E++EA
Sbjct: 520 LACGMISVGSCNGDVTSTILQTIMEKSETELKETYARWLPLGLGLNHLGKGEAIEAILAA 579
Query: 584 SKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 628
+ +E R + + + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 580 LEVVSEPFRSFANTLVDICAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 127 (49.8 bits), Expect = 9.5e-150, Sum P(2) = 9.5e-150
Identities = 24/36 (66%), Positives = 31/36 (86%)
Query: 629 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGE 664
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGE 683
>SGD|S000001069 [details] [associations]
symbol:RPN1 "Base subunit of the 19S regulatory particle of
the 26S proteasome" species:4932 "Saccharomyces cerevisiae"
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0030674
"protein binding, bridging" evidence=IPI] [GO:0004175
"endopeptidase activity" evidence=TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=TAS] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 SGD:S000001069
INTERPRO:IPR002015 GO:GO:0005783 GO:GO:0005634 GO:GO:0030234
SUPFAM:SSF48371 EMBL:BK006934 GO:GO:0050790 GO:GO:0006511
GO:GO:0042176 EMBL:U10399 GO:GO:0034515 GO:GO:0008540 Pfam:PF01851
eggNOG:COG5110 GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1 OrthoDB:EOG4P8JSC
PIR:S46779 RefSeq:NP_011892.1 ProteinModelPortal:P38764
DIP:DIP-2876N IntAct:P38764 MINT:MINT-707867 STRING:P38764
PaxDb:P38764 PeptideAtlas:P38764 EnsemblFungi:YHR027C GeneID:856422
KEGG:sce:YHR027C NextBio:981994 Genevestigator:P38764
GermOnline:YHR027C Uniprot:P38764
Length = 993
Score = 536 (193.7 bits), Expect = 3.2e-127, Sum P(3) = 3.2e-127
Identities = 119/317 (37%), Positives = 186/317 (58%)
Query: 314 LQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRAS-AGASVDSARQNLAATF 372
+QDI+ N KLSE +L LA+++ + PK PEDIYK+HL + ++ + A +DSA+QNLA++F
Sbjct: 326 VQDIIGNGKLSEHFLYLAKELNLTGPKVPEDIYKSHLDNSKSVFSSAGLDSAQQNLASSF 385
Query: 373 VNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQ 432
VN F+N G+ DKL+ V +D NW++K K G SA AS+G I W++D GL Q
Sbjct: 386 VNGFLNLGYCNDKLI-VDND--------NWVYKTKGDGMTSAVASIGSIYQWNLD-GLQQ 435
Query: 433 IDKYFHSTDNHVIAGALLGVGIVNCGIRN-DCDPALALLSEYVGREDACIRIGAIMGLGI 491
+DKY + + V AGALLG+GI G+ + + +PAL LL +YV D I AI+GLGI
Sbjct: 436 LDKYLYVDEPEVKAGALLGIGISASGVHDGEVEPALLLLQDYVTNPDTKISSAAILGLGI 495
Query: 492 SYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSE 551
++AG++ND++ L I P++ A ++++L ++VG+CN ++ +I+ ++R+
Sbjct: 496 AFAGSKNDEVLGLLLPIAASTDLPIETAAMASLALAHVFVGTCNGDITTSIMDNFLERTA 555
Query: 552 SELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVL 611
EL + E V+ E + ++ + SCAY GTG+VL
Sbjct: 556 IELKTDWVRFLALALGILYMGQGEQVDDVLETISAIEHPMTSAIEVLVGSCAYTGTGDVL 615
Query: 612 KVQNLLGHCAQHHEKGE 628
+Q+LL + KGE
Sbjct: 616 LIQDLLHRLTPKNVKGE 632
Score = 512 (185.3 bits), Expect = 3.2e-127, Sum P(3) = 3.2e-127
Identities = 98/234 (41%), Positives = 157/234 (67%)
Query: 634 AVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSR 693
AVLGIA++A+ E++G EM++R HL+ YG ++IRR VPLA+G++ +S+P++ V DTL+R
Sbjct: 739 AVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGIVSVSDPQMKVFDTLTR 798
Query: 694 LSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMG 753
SHD D EV+M ++ ++GL G+GTNNAR+A +LR L+SYY ++ + LF R+AQGL+H+G
Sbjct: 799 FSHDADLEVSMNSIFAMGLCGAGTNNARLAQLLRQLASYYSREQDALFITRLAQGLLHLG 858
Query: 754 KGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLT 813
KG +T++ ++ D +L+ LA I+TT + ++ K+H + Y L ++P+ +L
Sbjct: 859 KGTMTMDVFN-DAHVLNKVTLASILTTAVGLVSPSFML--KHHQLFYMLNAGIRPKFILA 915
Query: 814 VDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEK 867
+++ +P+ PK ITG+ T STPVLL G+RAEL T++
Sbjct: 916 LNDEGEPIKVNVRVGQAVETVGQAGRPKKITGWITQSTPVLLNHGERAELETDE 969
Score = 327 (120.2 bits), Expect = 1.8e-104, Sum P(3) = 1.8e-104
Identities = 77/223 (34%), Positives = 117/223 (52%)
Query: 171 EASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAA 230
E S +D + L +IV + +KHN E F+R C Y+ +
Sbjct: 194 EFSKEDTLRLCLDIVPYFLKHNGEEDAVDLLLEIESIDKLPQFVDENTFQRVCQYMVACV 253
Query: 231 KYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYI 290
LP P+D+ L AY IYL E +A+ +A+ L ++ +F + D + KQ YI
Sbjct: 254 PLLPPPEDVAFLKTAYSIYLSQNELTDAIALAVRLGEEDMIRSVFDATSDPVMHKQLAYI 313
Query: 291 LARHGITLELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHL 350
LA + E +QDI+ N KLSE +L LA+++ + PK PEDIYK+HL
Sbjct: 314 LAAQKTSFEYE-----------GVQDIIGNGKLSEHFLYLAKELNLTGPKVPEDIYKSHL 362
Query: 351 LDGRAS-AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSD 392
+ ++ + A +DSA+QNLA++FVN F+N G+ DKL+ V +D
Sbjct: 363 DNSKSVFSSAGLDSAQQNLASSFVNGFLNLGYCNDKLI-VDND 404
Score = 311 (114.5 bits), Expect = 3.2e-127, Sum P(3) = 3.2e-127
Identities = 64/132 (48%), Positives = 87/132 (65%)
Query: 48 LELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMPD 107
LEL VER+++ D L + +L +++ I+ STSSMT+VPKPLKFLRP Y L + Y+ D
Sbjct: 49 LELLVERLKEDDSSLYEASLNALKESIKNSTSSMTAVPKPLKFLRPTYPDLCSIYDKWTD 108
Query: 108 SDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEY--- 164
+LK +AD+LS+LA+T S G+ +SL+YRLL D WGHEY+R+LA EI + Y
Sbjct: 109 PNLKSSLADVLSILAMTYSENGKHDSLRYRLLSDVSDFEGWGHEYIRHLALEIGEVYNDQ 168
Query: 165 -AKRQTDEASID 175
K DE S D
Sbjct: 169 VEKDAEDETSSD 180
Score = 78 (32.5 bits), Expect = 2.1e-56, Sum P(3) = 2.1e-56
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 634 AVLGIAMVAMAEELG-LEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLS 692
A+LGI + A G +E A+ L+ + + I A L LG+ + V+ L
Sbjct: 451 ALLGIGISASGVHDGEVEPALLLLQDYVTNPDTKISSAAILGLGIAFAGSKNDEVLGLLL 510
Query: 693 RLSHDTDSEVAMAAVISLGL--IGSGTNNARIA-GMLRNL---SSYYYKDANLLFCVRIA 746
++ TD + AA+ SL L + GT N I ++ N ++ K + F + +A
Sbjct: 511 PIAASTDLPIETAAMASLALAHVFVGTCNGDITTSIMDNFLERTAIELKTDWVRF-LALA 569
Query: 747 QGLVHMGKG 755
G+++MG+G
Sbjct: 570 LGILYMGQG 578
Score = 75 (31.5 bits), Expect = 4.4e-56, Sum P(3) = 4.4e-56
Identities = 34/151 (22%), Positives = 68/151 (45%)
Query: 392 DASSGGSSGNWLFKNKEHGKMS--AAASLGMILLW---DV--DSGLAQIDKYFHSTDNHV 444
DA++ G + + + KE G + A A LG+ L+ D+ + L H + H+
Sbjct: 714 DATTDGKNDDEE-EEKEAGIVDELAYAVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHI 772
Query: 445 IAGALLGVGIVNCGIRNDCDPALAL---LSEYVGREDACIRIGAIMGLGISYAGTQNDQI 501
L +GIV+ DP + + L+ + D + + +I +G+ AGT N ++
Sbjct: 773 RRMVPLAMGIVSVS-----DPQMKVFDTLTRFSHDADLEVSMNSIFAMGLCGAGTNNARL 827
Query: 502 RHKLSTILNDAKSPLDVIAFSAISLGLIYVG 532
L + + D + + ++ GL+++G
Sbjct: 828 AQLLRQLASYYSREQDALFITRLAQGLLHLG 858
Score = 65 (27.9 bits), Expect = 4.9e-55, Sum P(3) = 4.9e-55
Identities = 19/92 (20%), Positives = 42/92 (45%)
Query: 638 IAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH- 696
+A + + L+ ++ L+ L E ++ L +G+ V L L
Sbjct: 419 VASIGSIYQWNLD-GLQQLDKYLYVDEPEVKAGALLGIGISASGVHDGEVEPALLLLQDY 477
Query: 697 --DTDSEVAMAAVISLGLIGSGTNNARIAGML 726
+ D++++ AA++ LG+ +G+ N + G+L
Sbjct: 478 VTNPDTKISSAAILGLGIAFAGSKNDEVLGLL 509
Score = 51 (23.0 bits), Expect = 1.4e-53, Sum P(3) = 1.4e-53
Identities = 27/103 (26%), Positives = 48/103 (46%)
Query: 445 IAGALLGVGIVNCGIRNDCDPALAL-----LSEYVGREDACIRIGAIMGLGISYAGTQND 499
+A A+LG+ ++ G D ++L L Y G E + MG+ +S + Q
Sbjct: 736 LAYAVLGIALIALG--EDIGKEMSLRHFGHLMHY-GNEHIRRMVPLAMGI-VSVSDPQM- 790
Query: 500 QIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAI 542
++ L+ +DA L+V S ++GL G+ N +AQ +
Sbjct: 791 KVFDTLTRFSHDAD--LEVSMNSIFAMGLCGAGTNNARLAQLL 831
>GENEDB_PFALCIPARUM|PFB0260w [details] [associations]
symbol:PFB0260w "proteasome 26S regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0006511 GO:GO:0042176 EMBL:AE001362
GO:GO:0005838 HOGENOM:HOG000176022 KO:K03028 PANTHER:PTHR10943:SF1
RefSeq:XP_001349569.2 IntAct:O96153 MINT:MINT-1742855 PRIDE:O96153
EnsemblProtists:PFB0260w:mRNA GeneID:812651 KEGG:pfa:PFB0260w
EuPathDB:PlasmoDB:PF3D7_0205900 ProtClustDB:CLSZ2514754
Uniprot:O96153
Length = 966
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 191/593 (32%), Positives = 319/593 (53%)
Query: 46 QQLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETM 105
++LEL + R++D D + +++ + EI ++ +TS LK L+ HY TL + M
Sbjct: 44 EELELLITRLRDEDVNVVNLSISLLNKEIIDTSGILTSSLLALKVLKTHYNTLIEIFNEM 103
Query: 106 PDSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYA 165
+ KK +++++S L+ T+ E +K+ + G++ D+ ++GHEY++NL ++ EY
Sbjct: 104 IFEECKKKLSNMISALSTTIG--DENNIVKFVITGNKHDLINYGHEYIKNLITKLLVEYK 161
Query: 166 KRQTDE----------------ASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXX 209
+ +E +I+ + ++V +V + HN E
Sbjct: 162 ILKEEENNQNGLTTTSTTSNKLVTINHIYDIVNIVVPYCFAHNTEYEAIDLLIEVDKIND 221
Query: 210 XXXXXXATNFKRTCLYLTSAAKYLPGPDDML-VLDIAYMIYLKFEEFPNALQIALFLDNM 268
+ R+ LYL + Y D+ ++D+ I K + L+I L L+ +
Sbjct: 222 IYLYVDEKSCDRSILYLLNLTHYSSSTDEYYKLMDVILNILKKHNKHVECLKILLRLNKI 281
Query: 269 QYVKQIFTSCDDLLRKKQFCYILARHGITLELXXXXXXXXXXRYA--LQDIVNNVKLSEG 326
+K + C+D+L KQ I +RH + ++ + + + LS
Sbjct: 282 DKIKDLIFECNDILICKQIALICSRHCVHIQFTEEEIKKYTHLNLNEISTLTSGEHLSPI 341
Query: 327 YLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKL 386
+L LA+D++V EPK PED+YK+HL + R + DSA+QNL++TFVNAFVNA F +DKL
Sbjct: 342 FLKLAKDLDVEEPKLPEDVYKSHLEEKRNTT--VWDSAKQNLSSTFVNAFVNAAFCKDKL 399
Query: 387 MTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA 446
MTV +S W+FKNK++G MSA AS+G++L+W++D GL+QIDK+ +S+D +V A
Sbjct: 400 MTV--------NSSLWIFKNKDYGLMSATASMGLLLMWNLDEGLSQIDKFQYSSDQYVKA 451
Query: 447 GALLGVGIVNCGIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLS 506
GAL+ G+ I+N+CDPA ALLSE++ E+A ++GAI+G G +YAGT + + L
Sbjct: 452 GALMAFGLACTNIKNECDPAYALLSEHIDAENALEKMGAILGFGYAYAGTNRENLLDILI 511
Query: 507 TILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSE--SELGEPXXXXXXX 564
L D ++ ++A+SLGL++VGS N E+A+ II ++++ + + L P
Sbjct: 512 PPLVDNGCIIECSVYAALSLGLVFVGSQNREIAEYIIDTVLEKEKINNSLDTPIAKLYAV 571
Query: 565 XXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLL 617
+E EAT + I KY T+ A+AG+ +VLKVQ +L
Sbjct: 572 ALGLLFLCSREKCEATLSALEIIKHPISKYMIATVEGMAFAGSNDVLKVQKML 624
Score = 633 (227.9 bits), Expect = 2.0e-61, P = 2.0e-61
Identities = 142/381 (37%), Positives = 223/381 (58%)
Query: 487 MGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFAL 546
+ LG+ + ++ ++ LS L K P+ + + G+ + GS + Q ++ L
Sbjct: 571 VALGLLFLCSR-EKCEATLSA-LEIIKHPISKYMIATVE-GMAFAGSNDVLKVQKMLQVL 627
Query: 547 MDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAG 606
+++ G+ +S + A+++KT K D + + +
Sbjct: 628 VEKR----GDKKNNSDNKTTTANNTDNNKS--SNADINKTTTTDTSKKTDNNNNNSS-SN 680
Query: 607 TGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQN 666
N K ++++ + Q A+L IA++A+ +++ +M R ++H LQY N
Sbjct: 681 NKNT-KSNEEKSSSSKNYVEDNLDQCVAILNIALIALTDDISSDMTTRIIDHFLQYSNVN 739
Query: 667 IRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGML 726
++AVPLAL LL S PK N++D LS+L+HD D +VA+ A+ISLG +G+GTNN+RIA +L
Sbjct: 740 QKKAVPLALALLFTSFPKPNIVDILSKLTHDQDPDVALHAIISLGFVGAGTNNSRIAILL 799
Query: 727 RNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLD 786
R LS++Y KD N +F VR+AQGL++MGKGLLT+NP HS+R +++ +L ++ T+ ACL
Sbjct: 800 RQLSAFYCKDTNAIFVVRLAQGLLYMGKGLLTINPLHSNRSIINYVSLGSLLITIHACLQ 859
Query: 787 MKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGF 846
+K+ I+GKYHY+LY LV + PRML+TV+E L+ L PKTITGF
Sbjct: 860 LKSTILGKYHYLLYHLVPCIYPRMLVTVNEKLESLPVSVRVGQAVDIVGQAGKPKTITGF 919
Query: 847 QTHSTPVLLAAGDRAELATEK 867
QTH TPVLL+ DRAE+ATE+
Sbjct: 920 QTHVTPVLLSHTDRAEMATEE 940
>UNIPROTKB|O96153 [details] [associations]
symbol:PFB0260w "Proteasome 26S regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0006511 GO:GO:0042176 EMBL:AE001362
GO:GO:0005838 HOGENOM:HOG000176022 KO:K03028 PANTHER:PTHR10943:SF1
RefSeq:XP_001349569.2 IntAct:O96153 MINT:MINT-1742855 PRIDE:O96153
EnsemblProtists:PFB0260w:mRNA GeneID:812651 KEGG:pfa:PFB0260w
EuPathDB:PlasmoDB:PF3D7_0205900 ProtClustDB:CLSZ2514754
Uniprot:O96153
Length = 966
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 191/593 (32%), Positives = 319/593 (53%)
Query: 46 QQLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETM 105
++LEL + R++D D + +++ + EI ++ +TS LK L+ HY TL + M
Sbjct: 44 EELELLITRLRDEDVNVVNLSISLLNKEIIDTSGILTSSLLALKVLKTHYNTLIEIFNEM 103
Query: 106 PDSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYA 165
+ KK +++++S L+ T+ E +K+ + G++ D+ ++GHEY++NL ++ EY
Sbjct: 104 IFEECKKKLSNMISALSTTIG--DENNIVKFVITGNKHDLINYGHEYIKNLITKLLVEYK 161
Query: 166 KRQTDE----------------ASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXX 209
+ +E +I+ + ++V +V + HN E
Sbjct: 162 ILKEEENNQNGLTTTSTTSNKLVTINHIYDIVNIVVPYCFAHNTEYEAIDLLIEVDKIND 221
Query: 210 XXXXXXATNFKRTCLYLTSAAKYLPGPDDML-VLDIAYMIYLKFEEFPNALQIALFLDNM 268
+ R+ LYL + Y D+ ++D+ I K + L+I L L+ +
Sbjct: 222 IYLYVDEKSCDRSILYLLNLTHYSSSTDEYYKLMDVILNILKKHNKHVECLKILLRLNKI 281
Query: 269 QYVKQIFTSCDDLLRKKQFCYILARHGITLELXXXXXXXXXXRYA--LQDIVNNVKLSEG 326
+K + C+D+L KQ I +RH + ++ + + + LS
Sbjct: 282 DKIKDLIFECNDILICKQIALICSRHCVHIQFTEEEIKKYTHLNLNEISTLTSGEHLSPI 341
Query: 327 YLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKL 386
+L LA+D++V EPK PED+YK+HL + R + DSA+QNL++TFVNAFVNA F +DKL
Sbjct: 342 FLKLAKDLDVEEPKLPEDVYKSHLEEKRNTT--VWDSAKQNLSSTFVNAFVNAAFCKDKL 399
Query: 387 MTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA 446
MTV +S W+FKNK++G MSA AS+G++L+W++D GL+QIDK+ +S+D +V A
Sbjct: 400 MTV--------NSSLWIFKNKDYGLMSATASMGLLLMWNLDEGLSQIDKFQYSSDQYVKA 451
Query: 447 GALLGVGIVNCGIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLS 506
GAL+ G+ I+N+CDPA ALLSE++ E+A ++GAI+G G +YAGT + + L
Sbjct: 452 GALMAFGLACTNIKNECDPAYALLSEHIDAENALEKMGAILGFGYAYAGTNRENLLDILI 511
Query: 507 TILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSE--SELGEPXXXXXXX 564
L D ++ ++A+SLGL++VGS N E+A+ II ++++ + + L P
Sbjct: 512 PPLVDNGCIIECSVYAALSLGLVFVGSQNREIAEYIIDTVLEKEKINNSLDTPIAKLYAV 571
Query: 565 XXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLL 617
+E EAT + I KY T+ A+AG+ +VLKVQ +L
Sbjct: 572 ALGLLFLCSREKCEATLSALEIIKHPISKYMIATVEGMAFAGSNDVLKVQKML 624
Score = 633 (227.9 bits), Expect = 2.0e-61, P = 2.0e-61
Identities = 142/381 (37%), Positives = 223/381 (58%)
Query: 487 MGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFAL 546
+ LG+ + ++ ++ LS L K P+ + + G+ + GS + Q ++ L
Sbjct: 571 VALGLLFLCSR-EKCEATLSA-LEIIKHPISKYMIATVE-GMAFAGSNDVLKVQKMLQVL 627
Query: 547 MDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAG 606
+++ G+ +S + A+++KT K D + + +
Sbjct: 628 VEKR----GDKKNNSDNKTTTANNTDNNKS--SNADINKTTTTDTSKKTDNNNNNSS-SN 680
Query: 607 TGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQN 666
N K ++++ + Q A+L IA++A+ +++ +M R ++H LQY N
Sbjct: 681 NKNT-KSNEEKSSSSKNYVEDNLDQCVAILNIALIALTDDISSDMTTRIIDHFLQYSNVN 739
Query: 667 IRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGML 726
++AVPLAL LL S PK N++D LS+L+HD D +VA+ A+ISLG +G+GTNN+RIA +L
Sbjct: 740 QKKAVPLALALLFTSFPKPNIVDILSKLTHDQDPDVALHAIISLGFVGAGTNNSRIAILL 799
Query: 727 RNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLD 786
R LS++Y KD N +F VR+AQGL++MGKGLLT+NP HS+R +++ +L ++ T+ ACL
Sbjct: 800 RQLSAFYCKDTNAIFVVRLAQGLLYMGKGLLTINPLHSNRSIINYVSLGSLLITIHACLQ 859
Query: 787 MKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGF 846
+K+ I+GKYHY+LY LV + PRML+TV+E L+ L PKTITGF
Sbjct: 860 LKSTILGKYHYLLYHLVPCIYPRMLVTVNEKLESLPVSVRVGQAVDIVGQAGKPKTITGF 919
Query: 847 QTHSTPVLLAAGDRAELATEK 867
QTH TPVLL+ DRAE+ATE+
Sbjct: 920 QTHVTPVLLSHTDRAEMATEE 940
>UNIPROTKB|C9JPC0 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016643 GO:GO:0030234 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AC078797 PANTHER:PTHR10943:SF1 HGNC:HGNC:9559
ChiTaRS:PSMD2 IPI:IPI00795529 ProteinModelPortal:C9JPC0
STRING:C9JPC0 PRIDE:C9JPC0 Ensembl:ENST00000417952
HOGENOM:HOG000213397 ArrayExpress:C9JPC0 Bgee:C9JPC0 Uniprot:C9JPC0
Length = 217
Score = 339 (124.4 bits), Expect = 9.6e-41, Sum P(2) = 9.6e-41
Identities = 66/107 (61%), Positives = 84/107 (78%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M
Sbjct: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYV 153
+ K++ ADI+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYV
Sbjct: 115 PGENKRFAADIISVLAMTMS--GERECLKYRLVGSQEELASWGHEYV 159
Score = 129 (50.5 bits), Expect = 9.6e-41, Sum P(2) = 9.6e-41
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 228 SAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 285
S Y+P P++ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +K
Sbjct: 160 SCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQK 217
>UNIPROTKB|H9KZ05 [details] [associations]
symbol:Gga.48069 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016643 GO:GO:0030234 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GeneTree:ENSGT00550000074983 PANTHER:PTHR10943:SF1
EMBL:AADN02048751 Ensembl:ENSGALT00000002178 Uniprot:H9KZ05
Length = 165
Score = 421 (153.3 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 85/143 (59%), Positives = 103/143 (72%)
Query: 725 MLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFAC 784
MLR L+ Y+ KD N LF VR+AQGL H+GKG LTL PYHSDR L+S A+AG++T L +
Sbjct: 1 MLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSF 60
Query: 785 LDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTIT 844
LD++ +I+GK HYVLY LV AMQPRML+T DE L+PL PKTIT
Sbjct: 61 LDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTIT 120
Query: 845 GFQTHSTPVLLAAGDRAELATEK 867
GFQTH+TPVLLA G+RAELATE+
Sbjct: 121 GFQTHTTPVLLAHGERAELATEE 143
>UNIPROTKB|H7C1H2 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 EMBL:AC078797
PANTHER:PTHR10943:SF1 HGNC:HGNC:9559 ChiTaRS:PSMD2
ProteinModelPortal:H7C1H2 Ensembl:ENST00000432855 Uniprot:H7C1H2
Length = 203
Score = 400 (145.9 bits), Expect = 2.2e-36, P = 2.2e-36
Identities = 85/206 (41%), Positives = 124/206 (60%)
Query: 546 LMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYA 605
+M++SE+EL + K E++EA + +E R + + + CAYA
Sbjct: 3 IMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYA 62
Query: 606 GTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQ 665
G+GNVLKVQ LL C++H + E + +E +M H L+YGE
Sbjct: 63 GSGNVLKVQQLLHICSEHFDSKEKEEDKDKKE-KKDKDKKEAPADMGA----HQLRYGEP 117
Query: 666 NIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGM 725
+RRAVPLAL L+ +SNP++N++DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A M
Sbjct: 118 TLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAM 177
Query: 726 LRNLSSYYYKDANLLFCVRIAQGLVH 751
LR L+ Y+ KD N LF VR+AQGL H
Sbjct: 178 LRQLAQYHAKDPNNLFMVRLAQGLTH 203
>UNIPROTKB|F1P4Q5 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016643
GO:GO:0030234 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074983 PANTHER:PTHR10943:SF1
EMBL:AADN02020694 IPI:IPI00590802 Ensembl:ENSGALT00000039839
ArrayExpress:F1P4Q5 Uniprot:F1P4Q5
Length = 200
Score = 381 (139.2 bits), Expect = 2.5e-34, P = 2.5e-34
Identities = 75/125 (60%), Positives = 99/125 (79%)
Query: 47 QLELYVERVQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMP 106
+LE+ VER+ + D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M
Sbjct: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
Query: 107 DSDLKKYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAK 166
+ K++ ADI+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYVR+LAGE+A+E+
Sbjct: 115 PGENKRFAADIISVLAMTMS--GERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEW-- 170
Query: 167 RQTDE 171
++ DE
Sbjct: 171 QEIDE 175
>UNIPROTKB|H7C2Q3 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016643 GO:GO:0030234 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AC078797 PANTHER:PTHR10943:SF1 HGNC:HGNC:9559
ChiTaRS:PSMD2 ProteinModelPortal:H7C2Q3 Ensembl:ENST00000445558
Uniprot:H7C2Q3
Length = 143
Score = 320 (117.7 bits), Expect = 9.5e-28, P = 9.5e-28
Identities = 62/100 (62%), Positives = 78/100 (78%)
Query: 57 DPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMPDSDLKKYMAD 116
+ D L + ALE +R +IR+ST+SMTSVPKPLKFLRPHYG LK YE M + K++ AD
Sbjct: 3 EKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAAD 62
Query: 117 ILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNL 156
I+SVLA+TMS GERE LKYRL+GS+ ++ SWGHEYVR +
Sbjct: 63 IISVLAMTMS--GERECLKYRLVGSQEELASWGHEYVREV 100
>TAIR|locus:2128823 [details] [associations]
symbol:AT4G08140 "AT4G08140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161510
EMBL:AC006267 IPI:IPI00527843 PIR:C85080 RefSeq:NP_192554.1
UniGene:At.54196 STRING:Q9SYE4 EnsemblPlants:AT4G08140.1
GeneID:826362 KEGG:ath:AT4G08140 TAIR:At4g08140 InParanoid:Q9SYE4
Genevestigator:Q9SYE4 Uniprot:Q9SYE4
Length = 84
Score = 276 (102.2 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 56/70 (80%), Positives = 62/70 (88%)
Query: 55 VQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMPDSDLKKYM 114
VQDP+P LQK ALESMR EIR TSSMTSVPKPLKFLRP Y TLKA++ETM DS+LKKY+
Sbjct: 2 VQDPNPDLQKAALESMRQEIRALTSSMTSVPKPLKFLRPQYVTLKAFHETMADSNLKKYI 61
Query: 115 ADILSVLALT 124
+DILSVLALT
Sbjct: 62 SDILSVLALT 71
>CGD|CAL0003585 [details] [associations]
symbol:RPN2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
CGD:CAL0003585 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACQ01000070 EMBL:AACQ01000071 eggNOG:COG5116
KO:K03032 Pfam:PF01851 RefSeq:XP_716329.1 RefSeq:XP_716391.1
ProteinModelPortal:Q5A3L0 STRING:Q5A3L0 GeneID:3641945
GeneID:3642027 KEGG:cal:CaO19.12725 KEGG:cal:CaO19.5260
Uniprot:Q5A3L0
Length = 952
Score = 229 (85.7 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 114/488 (23%), Positives = 207/488 (42%)
Query: 349 HLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKE 408
+LLDGR+S S A TF NAF++AG D + G + NW
Sbjct: 319 NLLDGRSSIFHS--------AVTFANAFMHAGTTDDSFFR--KNLEWLGRATNW------ 362
Query: 409 HGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVI--AGALLGVGIVNCGIRNDCDPA 466
K SA A+LG+I ++ G + Y + G+L +G++ G +
Sbjct: 363 -SKFSATAALGVIHKGNLSQGRTILKPYLPGSSGSANNKGGSLFALGLIFAGHGREVIGT 421
Query: 467 L-ALLSEY---VGREDACIRI-GAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAF 521
L + + + G D I++ GA +G G++ G++++ + L +L + S + A
Sbjct: 422 LKSFIDDNGNAAGSNDIDIQLHGAALGAGVAGMGSKSESLYESLKVVLY-SDSAISSQA- 479
Query: 522 SAISLGLIYVGSCNEE-VAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEAT 580
+A+ +GL+ +GS NEE + + +AL + E+ + ++E +
Sbjct: 480 AALGMGLVMLGSGNEEAIKDMLTYALETQHENII-----RGLAIGIALLSYGREEKADEI 534
Query: 581 AEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAM 640
+ I +Y ++ AYAGTGN ++ LL H A + + +VL +
Sbjct: 535 IDQLMNQESSILRYGGAFTIALAYAGTGNNNAIKKLL-HFAVSDPSDDVRRA-SVLSLGF 592
Query: 641 VAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDS 700
+ + + ++ L Q ++R LALG+ C ++ L L+ D
Sbjct: 593 LLIRDYTAAPQIVKLLS---QSHNPHVRYGTALALGISCAGRAYPAAIEVLEPLTKDAVD 649
Query: 701 EVAMAAVISLGLIGSGTNNARIAGMLRNLSSYY-------YKDANLLFCVRIAQGLVHMG 753
V A+++ +I N I ++ + Y ++DA F +AQG++ G
Sbjct: 650 FVRQGALMASSMILIQQNEF-IYPKVKEFTKQYADTIKNKHEDALAKFGATLAQGIIDAG 708
Query: 754 KGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVL-YFLVLAMQPRMLL 812
T+N +S L+ A+ G+ TLF + Y + L +FL L+ P ++
Sbjct: 709 GRNSTINLENSQTNTLNTKAIVGL--TLF--------VQSWYWFPLAHFLSLSFAPTSII 758
Query: 813 TV-DENLK 819
V ++LK
Sbjct: 759 GVRGQDLK 766
>SGD|S000001337 [details] [associations]
symbol:RPN2 "Subunit of the 26S proteasome" species:4932
"Saccharomyces cerevisiae" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IMP;IPI] [GO:0034515 "proteasome
storage granule" evidence=IDA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0004175 "endopeptidase activity"
evidence=IMP] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043248 "proteasome
assembly" evidence=IGI] [GO:0050790 "regulation of catalytic
activity" evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 SGD:S000001337 INTERPRO:IPR002015 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:BK006942 GO:GO:0050790 GO:GO:0043248 GO:GO:0006511 EMBL:Z37997
GO:GO:0042176 GO:GO:0034515 GO:GO:0008540 PDB:4B4T PDBsum:4B4T
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
KO:K03032 OMA:CVENAEL Pfam:PF01851 OrthoDB:EOG4KD9V5 EMBL:L06321
PIR:S48369 RefSeq:NP_012190.1 PDB:4ADY PDBsum:4ADY
ProteinModelPortal:P32565 SMR:P32565 DIP:DIP-4638N IntAct:P32565
MINT:MINT-539880 STRING:P32565 PaxDb:P32565 PeptideAtlas:P32565
EnsemblFungi:YIL075C GeneID:854735 KEGG:sce:YIL075C NextBio:977437
Genevestigator:P32565 GermOnline:YIL075C Uniprot:P32565
Length = 945
Score = 219 (82.2 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 100/450 (22%), Positives = 191/450 (42%)
Query: 344 DIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWL 403
D Y LL+ + ++ ++ +L F + +D S ++ WL
Sbjct: 297 DYYNTFLLNNKNIDIGLLNKSKSSLDGKFSLFHTAVSVANGFMHAGTTDNSFIKANLPWL 356
Query: 404 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYF---HSTDNHVIAGALLGVGIVNCGIR 460
K + K +A ASLG+I ++ G + Y ++ + G+L G+G++ G
Sbjct: 357 GKAQNWAKFTATASLGVIHKGNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFG 416
Query: 461 NDCDPALALL----SEYVGREDACIRI-GAIMGLGISYAGTQNDQIRHKLSTIL-NDAKS 514
D L + S G ED + + GA +G+G++ G+ N ++ L +L ND+ +
Sbjct: 417 RDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYEALKEVLYNDSAT 476
Query: 515 PLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQ 574
+ +A+ +GL +G+ E AI E++ G +Q
Sbjct: 477 SGEA---AALGMGLCMLGTGKPE---AIHDMFTYSQETQHGN-ITRGLAVGLALINYGRQ 529
Query: 575 ESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPA 634
E + +E + +Y ++ AYAGTGN V+ LL H A + + A
Sbjct: 530 ELADDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLL-HVAVSDSNDDVRRA-A 587
Query: 635 VLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRL 694
V+ + V + + + R ++ L + ++R ALG+ C + +D L L
Sbjct: 588 VIALGFVLLRDYTTVP---RIVQLLSKSHNAHVRCGTAFALGIACAGKGLQSAIDVLDPL 644
Query: 695 SHDTDSEVAMAAVISLGLI---GSGTNNARIAGMLRNLSSYY---YKDANLLFCVRIAQG 748
+ D V AA+I+L +I + N ++A + +N S +++ F +AQG
Sbjct: 645 TKDPVDFVRQAAMIALSMILIQQTEKLNPQVADINKNFLSVITNKHQEGLAKFGACVAQG 704
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIV 778
+++ G +T+ ++D L ++ G+V
Sbjct: 705 IMNAGGRNVTIQLENADTGTLDTKSVVGLV 734
Score = 41 (19.5 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 159 EIAQEYAKRQTDEASIDDLMELVQEIVA 186
E A +YA D ID+ + V+ IV+
Sbjct: 76 ESAVKYALAAKDRFDIDEKSQFVETIVS 103
>POMBASE|SPBC17D11.07c [details] [associations]
symbol:rpn2 "19S proteasome regulatory subunit Rpn2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISO] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004175 "endopeptidase
activity" evidence=ISO] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 PomBase:SPBC17D11.07c INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005634 GO:GO:0007346 GO:GO:0030234
SUPFAM:SSF48371 GO:GO:0043161 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR GO:GO:0042176
GO:GO:0008540 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 PIR:T39718 RefSeq:NP_596381.1
ProteinModelPortal:O74762 IntAct:O74762 STRING:O74762
EnsemblFungi:SPBC17D11.07c.1 GeneID:2540191 KEGG:spo:SPBC17D11.07c
OrthoDB:EOG4KD9V5 NextBio:20801323 Uniprot:O74762
Length = 965
Score = 202 (76.2 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 99/436 (22%), Positives = 192/436 (44%)
Query: 401 NWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTD-----NHVIAGALLGVGIV 455
+WL K K +A A+LG+I + + + Y D + GA +G++
Sbjct: 373 SWLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEEDAPSSSTYSEGGAFYAMGLI 432
Query: 456 NCGIRNDCDPALALLSEYVGR-EDACIRIGAIMGLGISYAGTQNDQIRHKLSTIL-NDAK 513
+ N L E + ED ++ G ++G+G++ ++++ + + TIL ND
Sbjct: 433 HA---NHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGMASRDETLYESVKTILFND-- 487
Query: 514 SPLDVIAFSA--ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXX 571
+ +A SA IS+GLI +G+ + + AI L E++ +
Sbjct: 488 ---NAVAGSAAGISMGLIMLGTAS---SAAIDEMLQYAHETQHEKIIRGLGIGIALIVYG 541
Query: 572 XKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQ 631
+QE+ E++ + +R Y M + AY GT N V+++L H + + +
Sbjct: 542 RQQEADGIIKELNNDLDPTLR-YAGMFATALAYCGTSNSKIVRDVL-HISVSDVNDDVRR 599
Query: 632 GPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTL 691
AV + + + L I ++E L+ ++R +ALG+ C ++ +D L
Sbjct: 600 A-AVCALGFICFKDPNAL---ISTVELLVDSYNPHVRYGSAIALGIACANSGSNAALDLL 655
Query: 692 SRLSHDTDSEVAMAAVISLGLIGSGTN---NARIAGMLRNLSSYY---YKDANLLFCVRI 745
SRL D V A+I+ +I + N N++++G+ ++ ++DA +
Sbjct: 656 SRLVEDATDFVRQGAMIAQAMILTQHNDQLNSKVSGIRKHFEQVINEKHEDALAKLGATL 715
Query: 746 AQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHY---VLYFL 802
AQG++ G +T+ + L +A+ G+ T+F +Y Y + +F+
Sbjct: 716 AQGIIDAGGRNVTI-ALQTATGSLKLSAIVGL--TVFL----------QYWYWFPLTHFM 762
Query: 803 VLAMQPRMLLTVDENL 818
L+ P L+ +D+NL
Sbjct: 763 SLSFSPTALIGLDKNL 778
Score = 155 (59.6 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 98/456 (21%), Positives = 190/456 (41%)
Query: 321 VKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAG 380
+++ G T+ D E + + D+ +L+ + + +S N A TF NAF+N G
Sbjct: 306 IRILSGEQTVKYDREFLYAHNNTDML---ILNRTKDSLEARNSVFHN-AVTFANAFMNFG 361
Query: 381 FGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHST 440
D D S WL K K +A A+LG+I + + + Y
Sbjct: 362 TSSDSFFR---DNLS------WLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEE 412
Query: 441 D-----NHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGR-EDACIRIGAIMGLGISYA 494
D + GA +G+++ N L E + ED ++ G ++G+G++
Sbjct: 413 DAPSSSTYSEGGAFYAMGLIHA---NHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGM 469
Query: 495 GTQNDQIRHKLSTIL-NDAKSPLDVIAFSA--ISLGLIYVGSCNEEVAQAIIFALMDRSE 551
++++ + + TIL ND + +A SA IS+GLI +G+ + + AI L E
Sbjct: 470 ASRDETLYESVKTILFND-----NAVAGSAAGISMGLIMLGTAS---SAAIDEMLQYAHE 521
Query: 552 SELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVL 611
++ + +QE+ E++ + +R Y M + AY GT N
Sbjct: 522 TQHEKIIRGLGIGIALIVYGRQQEADGIIKELNNDLDPTLR-YAGMFATALAYCGTSNSK 580
Query: 612 KVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGL----EMAIRSLEHLLQYGEQNI 667
V+++L H + + + AV + + + L E+ + S ++YG
Sbjct: 581 IVRDVL-HISVSDVNDDVRRA-AVCALGFICFKDPNALISTVELLVDSYNPHVRYGS--- 635
Query: 668 RRAVPLALGLLCI-SNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGML 726
A+ L + SN ++++ L + D + AM A + + N++++G+
Sbjct: 636 --AIALGIACANSGSNAALDLLSRLVEDATDFVRQGAMIAQAMILTQHNDQLNSKVSGIR 693
Query: 727 RNLSSYY---YKDANLLFCVRIAQGLVHMGKGLLTL 759
++ ++DA +AQG++ G +T+
Sbjct: 694 KHFEQVINEKHEDALAKLGATLAQGIIDAGGRNVTI 729
>TAIR|locus:2010672 [details] [associations]
symbol:AT1G04810 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010332 "response to
gamma radiation" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
EMBL:CP002684 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
EMBL:AC004809 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 ProtClustDB:CLSN2681948 EMBL:BT004007 IPI:IPI00520284
PIR:C86181 RefSeq:NP_171973.1 UniGene:At.19689
ProteinModelPortal:Q9MAT0 SMR:Q9MAT0 IntAct:Q9MAT0 STRING:Q9MAT0
PRIDE:Q9MAT0 ProMEX:Q9MAT0 EnsemblPlants:AT1G04810.1 GeneID:839409
KEGG:ath:AT1G04810 TAIR:At1g04810 InParanoid:Q9MAT0
PhylomeDB:Q9MAT0 ArrayExpress:Q9MAT0 Genevestigator:Q9MAT0
Uniprot:Q9MAT0
Length = 1001
Score = 185 (70.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 103/468 (22%), Positives = 191/468 (40%)
Query: 369 AATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDS 428
A + NA ++AG D + D WL + K SA A LG+I +
Sbjct: 377 ATIYANAIMHAGTTVDTFLRENLD---------WLSRATNWAKFSATAGLGVIHRGHLQQ 427
Query: 429 GLAQIDKYFHST------DNHVIAGALLGVGIVNC----GIRNDCDPALALLSEYVGRED 478
G + + Y + GAL +G+++ GI+ +L S V
Sbjct: 428 GRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDSLRSTSVEV---- 483
Query: 479 ACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEV 538
I+ GA +GLG++ GT ++ I + ++L + A IS+GL+ VG+ ++
Sbjct: 484 --IQHGACLGLGLAALGTADEDIYDDIKSVLYTDSAVAGEAA--GISMGLLLVGTATDKA 539
Query: 539 AQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMT 598
++ + +A E++ E ++E + E + I +Y M
Sbjct: 540 SEMLAYA----HETQ-HEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMY 594
Query: 599 LLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEH 658
L+ AY+GT N ++ LL H A + + + AVL + V ++ E R +
Sbjct: 595 ALALAYSGTANNKAIRQLL-HFAVS-DVSDDVRRTAVLALGFVLYSDP---EQTPRIVSL 649
Query: 659 LLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIG---S 715
L + ++R LA+G+ C + L L+ D V A+I++ ++ S
Sbjct: 650 LSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQIS 709
Query: 716 GTNNARIAGMLRNLSSYY---YKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPT 772
+++R+ R L ++D +A G++ G +T+ + T
Sbjct: 710 EASDSRVGAFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHD-KVT 768
Query: 773 ALAGIVTTLFACLDMKAVIVGKYHY-VLYFLVLAMQPRMLLTVDENLK 819
A+ G+ T+F+ Y Y ++YF+ LA P + ++ +LK
Sbjct: 769 AVIGL--TVFSQF--------WYWYPLIYFISLAFSPTAFIGLNYDLK 806
Score = 116 (45.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 42/170 (24%), Positives = 74/170 (43%)
Query: 365 RQNLAATFVNAFVNA---GFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMI 421
R +L +T V + G G L T D S L+ + +A S+G++
Sbjct: 473 RDSLRSTSVEVIQHGACLGLGLAALGTADEDIYDDIKSV--LYTDSAVAGEAAGISMGLL 530
Query: 422 LLWDVDSGLAQIDKYFHSTDNH-VIAGALLGVGIVNCGIRNDCDPALALLSEYVGREDAC 480
L+ +++ Y H T + +I G LG+ + G D L+ + +D
Sbjct: 531 LVGTATDKASEMLAYAHETQHEKIIRGLALGIALTVYGREEGAD---TLIEQMTRDQDPI 587
Query: 481 IRIGAIMGLGISYAGTQNDQ-IRHKLSTILNDAKSPLDVIAFSAISLGLI 529
IR G + L ++Y+GT N++ IR L ++D DV + ++LG +
Sbjct: 588 IRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSD--DVRRTAVLALGFV 635
Score = 60 (26.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 98 LKAYYETMPDSDLKKYMADILSVLALTMSAE-GE-RESLKYRL-LGSEGDIGSWGHEYVR 154
+++ YE D + ++ + ++LA + GE +SL Y L GS D+ S +Y+
Sbjct: 49 IESLYE---DEEFDQHQRQLAALLASKVFYYLGELNDSLSYALGAGSLFDV-SEDSDYIH 104
Query: 155 NLAGEIAQEYAKRQTDEASIDDLMELVQEIVA 186
L + EYA ++ +++E+ +VA
Sbjct: 105 TLLSKAIDEYAILRSKAVESSEVVEIDPRLVA 136
>WB|WBGene00004459 [details] [associations]
symbol:rpn-2 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0072686 "mitotic
spindle" evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938 GO:GO:0008340
GO:GO:0009792 GO:GO:0006915 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0031965
GO:GO:0000003 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2 RefSeq:NP_498347.3
ProteinModelPortal:Q18115 SMR:Q18115 IntAct:Q18115 MINT:MINT-210658
STRING:Q18115 PaxDb:Q18115 PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1
EnsemblMetazoa:C23G10.4b.2 EnsemblMetazoa:C23G10.4b.3 GeneID:175877
KEGG:cel:CELE_C23G10.4 UCSC:C23G10.4a.1 CTD:175877
WormBase:C23G10.4a WormBase:C23G10.4b eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 InParanoid:Q18115
KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851 Uniprot:Q18115
Length = 965
Score = 200 (75.5 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 97/432 (22%), Positives = 183/432 (42%)
Query: 401 NWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYF--HSTDNHVI--AGALLGVGIVN 456
NW+ K K +A ASLG+I S + ++ Y S + GA+L G+++
Sbjct: 368 NWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEPYLPKESVEGFGFKEGGAMLAYGLIH 427
Query: 457 CGIRNDCDPALALLSEYVGR-EDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSP 515
D A++ L++++ E+ +R GA +G G++ G+ + K+ +L ++
Sbjct: 428 AK-HGDAT-AMSTLAQWLKTAENEPVRHGACLGFGVAGLGSSSVSNYEKVREVLQRDEA- 484
Query: 516 LDVIAFSA-ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQ 574
V SA I++GLI G N+EV + +D + +
Sbjct: 485 --VSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDKTQRGIRTGLACAAFGLQGDAE 542
Query: 575 ESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPA 634
++ + N +R + +LS AYAGTG+ V+ LL A + + A
Sbjct: 543 PYIKEA--IGAKSNPMLRS-TGICMLSMAYAGTGSPDVVRRLLEKVAT--DPNLDVKRYA 597
Query: 635 VLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRL 694
+GI V + + + L ++ ++R +ALG+ C + + + +
Sbjct: 598 TIGIGFVLSKDP---STCLSYVAMLTEHFNGHVRYGAAMALGIACAGTGNMEAIALIEPM 654
Query: 695 SHDTDSEVAMAAVISLGLIGSGTNN---ARIAGMLRNLSSYY---YKDANLLFCVRIAQG 748
D + V A++SL LI + ++ G + L +D+ + F IAQG
Sbjct: 655 ISDKEGFVRKGALLSLALIMCQQTDYTCPKVNGFRKQLLKKIGEKNEDSLVKFGAIIAQG 714
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKY-HYVLYFLVLAMQ 807
L+ +G + +SD+ P + + + M + G + H + +F+ LA +
Sbjct: 715 LLDIGGQNAAVTMQNSDK---QPD--------MGSMVGMMCFLHGWFWHSMHFFIALAAK 763
Query: 808 PRMLLTVDENLK 819
P L+ ++ENLK
Sbjct: 764 PSCLVMMNENLK 775
Score = 40 (19.1 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 262 ALFLDN--MQYVKQIFTSCDDLLR 283
AL + N MQY T+CDD LR
Sbjct: 345 ALLISNGLMQYG----TTCDDFLR 364
>UNIPROTKB|Q18115 [details] [associations]
symbol:rpn-2 "26S proteasome non-ATPase regulatory subunit
1" species:6239 "Caenorhabditis elegans" [GO:0000502 "proteasome
complex" evidence=NAS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938
GO:GO:0008340 GO:GO:0009792 GO:GO:0006915 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119
GO:GO:0031965 GO:GO:0000003 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2
RefSeq:NP_498347.3 ProteinModelPortal:Q18115 SMR:Q18115
IntAct:Q18115 MINT:MINT-210658 STRING:Q18115 PaxDb:Q18115
PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1 EnsemblMetazoa:C23G10.4b.2
EnsemblMetazoa:C23G10.4b.3 GeneID:175877 KEGG:cel:CELE_C23G10.4
UCSC:C23G10.4a.1 CTD:175877 WormBase:C23G10.4a WormBase:C23G10.4b
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
InParanoid:Q18115 KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851
Uniprot:Q18115
Length = 965
Score = 200 (75.5 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 97/432 (22%), Positives = 183/432 (42%)
Query: 401 NWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYF--HSTDNHVI--AGALLGVGIVN 456
NW+ K K +A ASLG+I S + ++ Y S + GA+L G+++
Sbjct: 368 NWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEPYLPKESVEGFGFKEGGAMLAYGLIH 427
Query: 457 CGIRNDCDPALALLSEYVGR-EDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSP 515
D A++ L++++ E+ +R GA +G G++ G+ + K+ +L ++
Sbjct: 428 AK-HGDAT-AMSTLAQWLKTAENEPVRHGACLGFGVAGLGSSSVSNYEKVREVLQRDEA- 484
Query: 516 LDVIAFSA-ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQ 574
V SA I++GLI G N+EV + +D + +
Sbjct: 485 --VSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDKTQRGIRTGLACAAFGLQGDAE 542
Query: 575 ESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPA 634
++ + N +R + +LS AYAGTG+ V+ LL A + + A
Sbjct: 543 PYIKEA--IGAKSNPMLRS-TGICMLSMAYAGTGSPDVVRRLLEKVAT--DPNLDVKRYA 597
Query: 635 VLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRL 694
+GI V + + + L ++ ++R +ALG+ C + + + +
Sbjct: 598 TIGIGFVLSKDP---STCLSYVAMLTEHFNGHVRYGAAMALGIACAGTGNMEAIALIEPM 654
Query: 695 SHDTDSEVAMAAVISLGLIGSGTNN---ARIAGMLRNLSSYY---YKDANLLFCVRIAQG 748
D + V A++SL LI + ++ G + L +D+ + F IAQG
Sbjct: 655 ISDKEGFVRKGALLSLALIMCQQTDYTCPKVNGFRKQLLKKIGEKNEDSLVKFGAIIAQG 714
Query: 749 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKY-HYVLYFLVLAMQ 807
L+ +G + +SD+ P + + + M + G + H + +F+ LA +
Sbjct: 715 LLDIGGQNAAVTMQNSDK---QPD--------MGSMVGMMCFLHGWFWHSMHFFIALAAK 763
Query: 808 PRMLLTVDENLK 819
P L+ ++ENLK
Sbjct: 764 PSCLVMMNENLK 775
Score = 40 (19.1 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 262 ALFLDN--MQYVKQIFTSCDDLLR 283
AL + N MQY T+CDD LR
Sbjct: 345 ALLISNGLMQYG----TTCDDFLR 364
>TAIR|locus:2046402 [details] [associations]
symbol:AT2G32730 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0007010 "cytoskeleton organization" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010498 "proteasomal
protein catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC003974 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 EMBL:AY099861
IPI:IPI00538191 PIR:T00795 RefSeq:NP_180832.1 UniGene:At.19478
ProteinModelPortal:O48844 SMR:O48844 IntAct:O48844 STRING:O48844
PaxDb:O48844 PRIDE:O48844 ProMEX:O48844 EnsemblPlants:AT2G32730.1
GeneID:817833 KEGG:ath:AT2G32730 TAIR:At2g32730 InParanoid:O48844
OMA:LLCNFWG PhylomeDB:O48844 ProtClustDB:CLSN2681948
ArrayExpress:O48844 Genevestigator:O48844 Uniprot:O48844
Length = 1004
Score = 185 (70.2 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 99/464 (21%), Positives = 189/464 (40%)
Query: 369 AATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDS 428
A + NA ++AG D + D WL + K SA A LG+I +
Sbjct: 377 ATIYANAIMHAGTTVDTFLRENLD---------WLSRATNWAKFSATAGLGVIHRGHLQQ 427
Query: 429 GLAQIDKYFHST------DNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGREDA-CI 481
G + + Y + GAL +G+++ N + L + + + I
Sbjct: 428 GRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHA---NHGEGIKQFLRDSLRSTNVEVI 484
Query: 482 RIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQA 541
+ GA +GLG+S GT +++I + ++L + A IS+GL+ VG+ E+ ++
Sbjct: 485 QHGACLGLGLSALGTADEEIYDDVKSVLYTDSAVAGEAA--GISMGLLLVGTATEKASEM 542
Query: 542 IIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLS 601
+ +A E++ E ++E + E + I +Y M L+
Sbjct: 543 LAYA----HETQ-HEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYALA 597
Query: 602 CAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQ 661
AY+GT N ++ LL H A + + + AVL + V ++ E R + L +
Sbjct: 598 LAYSGTANNKAIRQLL-HFAVS-DVSDDVRRTAVLALGFVLYSDP---EQTPRIVSLLSE 652
Query: 662 YGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIG---SGTN 718
++R LA+G+ C + L L+ D V A+I++ ++ S +
Sbjct: 653 SYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEAS 712
Query: 719 NARIAGMLRNLSSYY---YKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALA 775
++R+ R L ++D +A G++ G +T+ LLS T
Sbjct: 713 DSRVGVFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIR-------LLSKTKHD 765
Query: 776 GIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLK 819
+ + + + ++ ++YF+ LA P + ++ +LK
Sbjct: 766 KVTAVIGLAVFSQ---FWYWYPLIYFISLAFSPTAFIGLNYDLK 806
Score = 47 (21.6 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 129 GE-RESLKYRL-LGSEGDIGSWGHEYVRNLAGEIAQEYAKRQTDEASIDDLMEL 180
GE +SL Y L G D+ S +YV L + EYA ++ ++++++
Sbjct: 78 GELNDSLSYALGAGPLFDV-SEDSDYVHTLLAKAIDEYASLRSKAVESNEMVDI 130
Score = 40 (19.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 55 VQDPDPGLQKVALESMRTEIRTSTSSMTSVPKPLKFLRPH 94
V + DP + E + T+I+ S TS+ L+FL H
Sbjct: 315 VHETDP-VDATYAERL-TKIKGILSGETSIQLTLQFLYSH 352
>ASPGD|ASPL0000047917 [details] [associations]
symbol:AN1700 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001307 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACD01000026 InterPro:IPR004155 SMART:SM00567
eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 OrthoDB:EOG4KD9V5 RefSeq:XP_659304.1
ProteinModelPortal:Q5BCN0 STRING:Q5BCN0
EnsemblFungi:CADANIAT00008343 GeneID:2874940 KEGG:ani:AN1700.2
Uniprot:Q5BCN0
Length = 1144
Score = 173 (66.0 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 112/517 (21%), Positives = 211/517 (40%)
Query: 319 NNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVN 378
N + + +G T+ ++E + S DI + L S+ + A T N F+
Sbjct: 418 NILDILDGIKTIQLNMEFLHRNSRVDIAILNKLRDTLEPRNSIFHS----AITISNGFMY 473
Query: 379 AGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYF- 437
AG QDK + WL K K +A A+LG+I ++ G + Y
Sbjct: 474 AGTAQDKFFR---------DNLEWLGKAVNWSKFTATAALGVIHRGNLSQGQRLLQPYLP 524
Query: 438 --HSTDNHVIAGALLGVG--IVNCGI--RNDCDPALALL-SEYVGREDACIRIGAIMGLG 490
+S D +G+L G + G+ N A+ + ++ + I+ G +GLG
Sbjct: 525 KENSIDGVGNSGSLYSQGGSLYALGLIYANHGGMAVDYIRDQFKKATEEVIQHGGALGLG 584
Query: 491 ISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRS 550
++ T ++ I L +L S L+ A +++GL+ +G+ N +V + +I D
Sbjct: 585 VAGMATGDEGIYDDLRNVLY-TDSALNGEAVG-LAMGLVMLGTGNMKVLEDMIQYAHDTQ 642
Query: 551 ESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNV 610
++ +QE+ + + +Y + ++ AY GT +
Sbjct: 643 HEKI----VRGLAMGMALIMYGRQEAADELINGLLGDPDPTLRYGGIMTIALAYCGTSSN 698
Query: 611 LKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRA 670
V+ LL H A + + + AVL + + + + R +E L + ++R
Sbjct: 699 KAVRKLL-HVAVS-DVNDDVRRVAVLSLGFILFRKHQSVP---RMVELLSESYNPHVRYG 753
Query: 671 VPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTN---NARIAGMLR 727
+ALG+ C +D L + D+ V A+I+L ++ N N R++ + +
Sbjct: 754 AAMALGISCAGTGLDEAIDLLEPMLKDSTDFVRQGALIALAMVLVQQNEAMNPRVSSLRK 813
Query: 728 NLS---SYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFAC 784
+ S ++DA F IA G++ G T++ L P GIV
Sbjct: 814 TMMKMVSDRHEDAMAKFGCAIALGIIDAGGRNCTISLQTQTGNLNMP----GIVGA---- 865
Query: 785 LDMKAVIVGKYHY--VLYFLVLAMQPRMLLTVDENLK 819
AV + +++ + +FL L+ P ++ VD+ L+
Sbjct: 866 ----AVFLQYWYWFPLTHFLSLSFAPTSVIGVDQKLE 898
>DICTYBASE|DDB_G0287953 [details] [associations]
symbol:psmD1 "26S proteasome regulatory subunit S1"
species:44689 "Dictyostelium discoideum" [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 dictyBase:DDB_G0287953
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GenomeReviews:CM000154_GR GO:GO:0004175 GO:GO:0006511 GO:GO:0042176
EMBL:AAFI02000105 GO:GO:0005838 eggNOG:COG5116 KO:K03032
OMA:CVENAEL Pfam:PF01851 RefSeq:XP_636972.1
ProteinModelPortal:Q54JM5 IntAct:Q54JM5 STRING:Q54JM5 PRIDE:Q54JM5
EnsemblProtists:DDB0232977 GeneID:8626381 KEGG:ddi:DDB_G0287953
ProtClustDB:CLSZ2728851 Uniprot:Q54JM5
Length = 975
Score = 173 (66.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 96/436 (22%), Positives = 188/436 (43%)
Query: 398 SSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTD-NHVI---AGALLGVG 453
S+ WL+K+ K SA +SLG+I + + + Y N +G+L +G
Sbjct: 378 SNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLKTYLPGASVNQTPYSESGSLYALG 437
Query: 454 IVNCGIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTIL-NDA 512
+++ + + + L E + +A + GA +GLG++ T D + L ++L ND
Sbjct: 438 LIHA---SHGEEIIDYLVEKLHINNAILHHGASLGLGLAAMATGRDDLYEDLKSVLYND- 493
Query: 513 KSPLDVIAFSA--ISLGLIYVGS-CNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXX 569
D ++ A +++GL+ +GS + + + + +A E++ E
Sbjct: 494 ----DAVSGEAAGLAMGLVMLGSGAKKAIEEMLAYA----HETQ-HEKTIRSLSMGLAFL 544
Query: 570 XXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEA 629
K+ES + E + + +Y M ++ AY GTG+ ++ LL H A + ++
Sbjct: 545 MYGKEESADTLIEQMIGDKDPLIRYGGMYAIAFAYCGTGHNDALRKLL-HVAVS-DGTDS 602
Query: 630 YQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMD 689
+ AV I V + E +++ L + ++R ALG+ C + + ++
Sbjct: 603 VRRAAVTCIGFVLSRQP---EKCPKAIALLAESYNPHVRYGAAFALGIACAGTGQRDALE 659
Query: 690 TLSRLSHDTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLS----SYYYKDANLLFCV 743
L L+ D+ V AA IS+ ++ T+ + A R L S +D+ F
Sbjct: 660 ILKSLTTDSVGYVKQAAWISMAMVLIQTSKELVPEAETARKLFATCISDKREDSMSKFGA 719
Query: 744 RIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLV 803
+A G++ G T+ HS + A+ GI L + + +F+
Sbjct: 720 VLAFGVIDAGGRNSTIQ-LHSPSGHKNMNAIVGIAGFLQFWY---------WFPMTHFMG 769
Query: 804 LAMQPRMLLTVDENLK 819
LA+ P ++ +++NL+
Sbjct: 770 LALTPTSIIGLNKNLE 785
Score = 42 (19.8 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 248 IYLKFEEFPNALQIAL 263
+Y +FPN+++ AL
Sbjct: 70 VYYNLSDFPNSMEYAL 85
Score = 38 (18.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 133 SLKYRL-LGSEGDIGSWGHEYVRNLAGEIAQEYAKRQT 169
S++Y L GS ++ S EY+ L + EY K +T
Sbjct: 80 SMEYALSAGSLFNVLSKS-EYIETLLYKFIDEYIKLRT 116
>UNIPROTKB|F1NUT6 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 IPI:IPI00598268
EMBL:AADN02020638 Ensembl:ENSGALT00000012419 ArrayExpress:F1NUT6
Uniprot:F1NUT6
Length = 955
Score = 147 (56.8 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 92/429 (21%), Positives = 165/429 (38%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 697 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 750
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVSQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRM 810
G +T++ P+ + +V T F + + +FL LA P
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWF----------WFPLSHFLSLAFTPTC 787
Query: 811 LLTVDENLK 819
++ ++++LK
Sbjct: 788 VIGLNKDLK 796
Score = 68 (29.0 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 44 (20.5 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 76 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENAELPE 120
Score = 41 (19.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 DNMQYVKQIFTSCDDLLRKK 285
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|E1C5P3 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AADN02020638 IPI:IPI00579067 Ensembl:ENSGALT00000012418
ArrayExpress:E1C5P3 Uniprot:E1C5P3
Length = 958
Score = 147 (56.8 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 92/429 (21%), Positives = 165/429 (38%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 395 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 454
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 455 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 512
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 513 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 566
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 567 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 625
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 626 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 680
Query: 697 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 750
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 681 DPVNYVRQGALIASALIMIQQTEITCPKVSQFRQLYSKVINDKHDDVMAKFGAILAQGIL 740
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRM 810
G +T++ P+ + +V T F + + +FL LA P
Sbjct: 741 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWF----------WFPLSHFLSLAFTPTC 790
Query: 811 LLTVDENLK 819
++ ++++LK
Sbjct: 791 VIGLNKDLK 799
Score = 68 (29.0 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 44 (20.5 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 76 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENAELPE 120
Score = 41 (19.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 DNMQYVKQIFTSCDDLLRKK 285
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|Q99460 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0005838 "proteasome regulatory particle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0030234 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
SUPFAM:SSF48371 Reactome:REACT_21300 GO:GO:0006977
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 EMBL:AC009407 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188
GO:GO:0005838 eggNOG:COG5116 KO:K03032 OMA:CVENAEL Pfam:PF01851
CTD:5707 HOVERGEN:HBG007543 EMBL:D44466 EMBL:BC001053 EMBL:BC014013
EMBL:BC039845 EMBL:BC047897 EMBL:BC064398 EMBL:BC073833
EMBL:BC094720 EMBL:BC112344 EMBL:BC114434 IPI:IPI00299608
IPI:IPI00456695 RefSeq:NP_001177966.1 RefSeq:NP_002798.2
UniGene:Hs.3887 ProteinModelPortal:Q99460 SMR:Q99460 DIP:DIP-27548N
IntAct:Q99460 MINT:MINT-1160606 STRING:Q99460 PhosphoSite:Q99460
DMDM:51704332 PaxDb:Q99460 PRIDE:Q99460 Ensembl:ENST00000308696
Ensembl:ENST00000373635 Ensembl:ENST00000409643 GeneID:5707
KEGG:hsa:5707 UCSC:uc002vrm.2 UCSC:uc002vrn.2 GeneCards:GC02P231921
HGNC:HGNC:9554 HPA:CAB021092 neXtProt:NX_Q99460 PharmGKB:PA33899
InParanoid:Q99460 OrthoDB:EOG4X97GG PhylomeDB:Q99460
ChEMBL:CHEMBL1934 ChiTaRS:PSMD1 GenomeRNAi:5707 NextBio:22174
ArrayExpress:Q99460 Bgee:Q99460 CleanEx:HS_PSMD1
Genevestigator:Q99460 GermOnline:ENSG00000173692 Uniprot:Q99460
Length = 953
Score = 146 (56.5 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 697 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 750
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 782
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 44 (20.5 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 76 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE 120
Score = 43 (20.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 60 PGLQKVALESMRTEIRTSTSSMTSVPK 86
PG +K + +SM TE +TS++ + P+
Sbjct: 288 PGSEKDS-DSMETEEKTSSAFVGKTPE 313
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 DNMQYVKQIFTSCDDLLRKK 285
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|A7MBA2 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543
OrthoDB:EOG4X97GG EMBL:DAAA02006191 EMBL:BC151445 IPI:IPI00714855
RefSeq:NP_001094547.1 UniGene:Bt.27989 STRING:A7MBA2
Ensembl:ENSBTAT00000006754 GeneID:511803 KEGG:bta:511803
InParanoid:A7MBA2 NextBio:20870109 Uniprot:A7MBA2
Length = 953
Score = 146 (56.5 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 697 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 750
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 782
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 44 (20.5 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 76 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE 120
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 DNMQYVKQIFTSCDDLLRKK 285
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|F1PX57 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AAEX03014431 Ensembl:ENSCAFT00000017372 Uniprot:F1PX57
Length = 953
Score = 146 (56.5 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGADMALGICCAGTGNKEAINLLEPMTN 677
Query: 697 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 750
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 782
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 44 (20.5 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 76 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE 120
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 DNMQYVKQIFTSCDDLLRKK 285
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|Q5R5S4 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 GeneTree:ENSGT00550000074915 KO:K03032 OMA:CVENAEL
Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543 OrthoDB:EOG4X97GG
EMBL:CR860782 RefSeq:NP_001126695.1 UniGene:Pab.18654
ProteinModelPortal:Q5R5S4 PRIDE:Q5R5S4 Ensembl:ENSPPYT00000015422
GeneID:100173695 KEGG:pon:100173695 InParanoid:Q5R5S4
Uniprot:Q5R5S4
Length = 953
Score = 146 (56.5 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 697 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 750
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 782
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 44 (20.5 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 76 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE 120
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 DNMQYVKQIFTSCDDLLRKK 285
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>MGI|MGI:1917497 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
MGI:MGI:1917497 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 GeneTree:ENSGT00550000074915
HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AK153386 EMBL:AK159123
EMBL:BC138526 EMBL:BC138527 IPI:IPI00267295 RefSeq:NP_081633.1
UniGene:Mm.280013 ProteinModelPortal:Q3TXS7 SMR:Q3TXS7
IntAct:Q3TXS7 STRING:Q3TXS7 PhosphoSite:Q3TXS7 PaxDb:Q3TXS7
PRIDE:Q3TXS7 Ensembl:ENSMUST00000027432 GeneID:70247 KEGG:mmu:70247
UCSC:uc007buy.1 InParanoid:B2RRP8 NextBio:331246 Bgee:Q3TXS7
Genevestigator:Q3TXS7 Uniprot:Q3TXS7
Length = 953
Score = 146 (56.5 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 697 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 750
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 782
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 44 (20.5 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 76 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE 120
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 DNMQYVKQIFTSCDDLLRKK 285
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>ZFIN|ZDB-GENE-040426-810 [details] [associations]
symbol:psmd1 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 1" species:7955 "Danio rerio" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
ZFIN:ZDB-GENE-040426-810 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GeneTree:ENSGT00550000074915 Pfam:PF01851
EMBL:BX571973 EMBL:CABZ01044354 IPI:IPI00506005
Ensembl:ENSDART00000144100 ArrayExpress:F1QY43 Uniprot:F1QY43
Length = 959
Score = 144 (55.7 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 91/429 (21%), Positives = 165/429 (38%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 388 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 447
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L LS+ + +R G +GLG++ GT + L + L +
Sbjct: 448 NHGGDIIDYL--LSQLKNASNDIVRHGGALGLGLAALGTARQDVYDLLKSNLYQDDAVTG 505
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS + AQAI + E++ E + E
Sbjct: 506 EAA--GLALGLVMLGS---KSAQAIEDMVGYAQETQ-HEKILRGLAVGIAMVMYGRMEEA 559
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + +
Sbjct: 560 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESI 618
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G M E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 619 GFIMFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 673
Query: 697 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 750
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 674 DPVNYVRQGALIASALIMIQQTEVTCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGVL 733
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRM 810
G +T++ P+ + +V T F + + +FL LA P
Sbjct: 734 DAGGRNVTISLQSRTGHTHMPSVVGLLVFTQFWF----------WFPLSHFLSLAFTPTA 783
Query: 811 LLTVDENLK 819
++ ++++LK
Sbjct: 784 IIGLNKDLK 792
Score = 66 (28.3 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + +Y+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 193 VLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 248
Score = 48 (22.0 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K++ + A + +
Sbjct: 71 ESLSYAL-GA-GDLFNVNDDSEYVETIIAKCIDHYTKQRVENAELPE 115
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 266 DNMQYVKQIFTSCDDLLRKKQ 286
D+ +YV+ I C D K++
Sbjct: 87 DDSEYVETIIAKCIDHYTKQR 107
>UNIPROTKB|F1LRN6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 Pfam:PF01851 IPI:IPI00949424
PRIDE:F1LRN6 Ensembl:ENSRNOT00000066613 ArrayExpress:F1LRN6
Uniprot:F1LRN6
Length = 952
Score = 145 (56.1 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 391 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 450
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 451 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 508
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 509 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 562
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 563 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 621
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 622 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGVCCAGTGNKEAINLLEPMTN 676
Query: 697 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 750
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 677 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 736
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 782
G +T++ P+ + +V T F
Sbjct: 737 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 768
Score = 68 (29.0 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 196 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 251
Score = 44 (20.5 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 75 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE 119
Score = 41 (19.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 DNMQYVKQIFTSCDDLLRKK 285
DN +YV+ I C D K+
Sbjct: 91 DNSEYVETIIAKCIDHYTKQ 110
>UNIPROTKB|G3V8B6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 GeneTree:ENSGT00550000074915
OMA:CVENAEL Pfam:PF01851 UniGene:Rn.2891 EMBL:CH474004
Ensembl:ENSRNOT00000024306 Uniprot:G3V8B6
Length = 953
Score = 145 (56.1 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGVCCAGTGNKEAINLLEPMTN 677
Query: 697 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 750
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 782
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 44 (20.5 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 76 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE 120
Score = 41 (19.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 DNMQYVKQIFTSCDDLLRKK 285
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|Q5F418 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
Pfam:PF01851 EMBL:AJ851482 IPI:IPI00598268 RefSeq:NP_001012618.1
UniGene:Gga.12538 ProteinModelPortal:Q5F418 STRING:Q5F418
PRIDE:Q5F418 GeneID:424926 KEGG:gga:424926 CTD:5707
HOVERGEN:HBG007543 NextBio:20827189 Uniprot:Q5F418
Length = 955
Score = 143 (55.4 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 71/317 (22%), Positives = 125/317 (39%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 697 DTDSEVAMAAVISLGLI 713
D + V A+I+ LI
Sbjct: 678 DPVNYVRQGALIASALI 694
Score = 107 (42.7 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 59/290 (20%), Positives = 119/290 (41%)
Query: 448 ALLGVGIVNCGIRNDCDPALALLSEYVGRE----DACIRIGAIMGLGISYAGTQNDQIRH 503
A +G+++ G + AL L++ Y+ ++ A G + LG+ +A D I +
Sbjct: 404 ATASLGVIHKGHEKE---ALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDY 460
Query: 504 KLSTILNDAKSPLDVIAFS-AISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXX 562
L+ + N + D++ ++ LGL +G+ ++V + L + ++ GE
Sbjct: 461 LLNQLKNASN---DIVRHGGSLGLGLAAMGTARQDVYDLLKTNLY-QDDAVTGEAAGLAL 516
Query: 563 XXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQ 622
Q + +T +EKI + + + Y G + + L+ +
Sbjct: 517 GLVMLGSKNA-QAIEDMVGYAQETQHEKILRGLAVGIALVMY---GRMEEADALIESLCR 572
Query: 623 HHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHL-LQYGEQNIRRAVPLALGLLCIS 681
+K + + +AM G AIR L H+ + ++RRA +LG +
Sbjct: 573 --DKDPILRRSGMYTVAMAYCGS--GNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFR 628
Query: 682 NPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSS 731
P+ +S LS + V A ++LG+ +GT N +L +++
Sbjct: 629 TPE-QCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Score = 68 (29.0 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 44 (20.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 76 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENAELPE 120
Score = 41 (19.5 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 DNMQYVKQIFTSCDDLLRKK 285
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>RGD|621669 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AJ006340 IPI:IPI00212512
RefSeq:NP_114184.1 UniGene:Rn.2891 ProteinModelPortal:O88761
IntAct:O88761 STRING:O88761 PhosphoSite:O88761 PRIDE:O88761
GeneID:83806 KEGG:rno:83806 UCSC:RGD:621669 InParanoid:O88761
NextBio:616403 ArrayExpress:O88761 Genevestigator:O88761
GermOnline:ENSRNOG00000017730 Uniprot:O88761
Length = 953
Score = 142 (55.0 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 86/429 (20%), Positives = 163/429 (37%)
Query: 402 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 457
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 458 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 517
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 518 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 577
A ++LGL+ +GS N + + ++ + ++ + E
Sbjct: 510 EAA--GLALGLVMLGSKNTQAIEDMVGYAQETQHEKI----LRGLAVGIALVMYGRMEEA 563
Query: 578 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 636
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 637 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 696
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGVCCAGTGNKEAINLLEPMTN 677
Query: 697 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 750
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 751 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRM 810
G +T++ P+ + +V T F + + +FL LA P
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWF----------WFPLSHFLSLAYTPTC 787
Query: 811 LLTVDENLK 819
++ ++++LK
Sbjct: 788 IIGLNKDLK 796
Score = 69 (29.3 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDTQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 44 (20.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 76 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE 120
Score = 41 (19.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 DNMQYVKQIFTSCDDLLRKK 285
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|J9P4R4 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 EMBL:AAEX03014431
Ensembl:ENSCAFT00000044920 Uniprot:J9P4R4
Length = 701
Score = 123 (48.4 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 72/326 (22%), Positives = 128/326 (39%)
Query: 362 DSARQNLA--ATFV-NAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASL 418
D+ R ++ AT + N+F++ G D+ + + WL + K +A ASL
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFLR---------DNLEWLARATNWAKFTATASL 408
Query: 419 GMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNCGIRNDCDPALALLSEYV 474
G+I L + Y + A G L +G+++ D L L++
Sbjct: 409 GVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYL--LNQLK 466
Query: 475 GREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSC 534
+ +R G +GLG++ GT + L T L + A ++LGL+ +GS
Sbjct: 467 NASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAA--GLALGLVMLGSK 524
Query: 535 NEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKY 594
N AQAI + E++ E + E +A E + I +
Sbjct: 525 N---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRR 580
Query: 595 CDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-LGIAMVAMAEELGLEMAI 653
M ++ AY G+GN ++ LL H A + + LG + E+ +++
Sbjct: 581 SGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSL 639
Query: 654 RSLEHLLQYGEQNIRRAVPLALGLLC 679
S + ++R +ALG+ C
Sbjct: 640 LSESY-----NPHVRYGADMALGICC 660
Score = 103 (41.3 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 59/293 (20%), Positives = 122/293 (41%)
Query: 448 ALLGVGIVNCGIRNDCDPALALLSEYVGRE----DACIRIGAIMGLGISYAGTQNDQIRH 503
A +G+++ G + AL L++ Y+ ++ A G + LG+ +A D I +
Sbjct: 404 ATASLGVIHKGHEKE---ALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDY 460
Query: 504 KLSTILNDAKSPLDVIAFS-AISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXX 562
L+ + N + D++ ++ LGL +G+ ++V + L + ++ GE
Sbjct: 461 LLNQLKNASN---DIVRHGGSLGLGLAAMGTARQDVYDLLKTNLY-QDDAVTGEAAGLAL 516
Query: 563 XXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQ 622
Q + +T +EKI + + + Y G + + L+ +
Sbjct: 517 GLVMLGSKNA-QAIEDMVGYAQETQHEKILRGLAVGIALVMY---GRMEEADALIESLCR 572
Query: 623 HHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHL-LQYGEQNIRRAVPLALGLLCIS 681
+K + + +AM G AIR L H+ + ++RRA +LG +
Sbjct: 573 --DKDPILRRSGMYTVAMAYCGS--GNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFR 628
Query: 682 NPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYY 734
P+ +S LS + V A ++LG+ +GT N + + ++ S+++
Sbjct: 629 TPE-QCPSVVSLLSESYNPHVRYGADMALGICCAGTGNKKSPKPMGSVLSWHH 680
Score = 68 (29.0 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 241 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 291
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 44 (20.5 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 132 ESLKYRLLGSEGDIGSWGH--EYVRNLAGEIAQEYAKRQTDEASIDD 176
ESL Y L G+ GD+ + EYV + + Y K+ + A + +
Sbjct: 76 ESLNYAL-GA-GDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE 120
>GENEDB_PFALCIPARUM|PF14_0632 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 151 (58.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 99/452 (21%), Positives = 182/452 (40%)
Query: 398 SSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTD------NHV---IA-- 446
S+ WL K K SA ASLG++ V+ + + D N++ +A
Sbjct: 522 SNIEWLSKAINWEKFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAPS 581
Query: 447 ------GALLGVGIVNCGIR-NDCDPALALLSEYVGR-EDACIRIGAIMGLGISYAGTQN 498
G+L +G+++ ND L+S+ D ++ G +GLG+ G N
Sbjct: 582 GVYSEGGSLYALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDSN 641
Query: 499 DQIRH-KLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEP 557
D+ + +L IL + A A ++GL+ +GS +++ ++ D ++
Sbjct: 642 DENTYDELKAILYSDSAVAGESA--AYAIGLLKLGSGDDKCIDELLAYAHDTQHEKI--- 696
Query: 558 XXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLK--VQN 615
K+ ++ E + + I +Y M ++ AY G N K ++
Sbjct: 697 -TRACSISLGFVMFQKEREADSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKK 755
Query: 616 LLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLAL 675
LL H + + + AV+ + V + L L++ ++R LAL
Sbjct: 756 LL-HFSVSDVSDDVRRA-AVIALGFVLCNSP---NQVPKFLNLLIESYNPHVRYGAALAL 810
Query: 676 GLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNN------ARIAGMLRNL 729
G+ C + ++ L L DT V +A ISLGLI +N + + +
Sbjct: 811 GIACSATANEEAINMLMPLLTDTTDFVRQSAFISLGLIFQQSNEHCNPNFKKYKEEIMKI 870
Query: 730 SSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRF-LLSPTALAGIVTTLFACLDMK 788
S ++D F ++ GL+ + G ++ + + R ++ P A AG LF+ L
Sbjct: 871 LSDKHEDIIAKFGAIVSAGLLDIC-GRNAISTFFTRRGNIIRPQAAAGFC--LFSQL--- 924
Query: 789 AVIVGKYHYVLYFLV-LAMQPRMLLTVDENLK 819
Y + L ++ L P L+ + E+LK
Sbjct: 925 -----WYWFPLIHMISLTFMPTCLIGLTEDLK 951
Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 244 IAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRK 284
+A IY E++ AL+ AL + +K+ + +L K
Sbjct: 74 LASKIYFHLEKYSEALKYALCAGKLFNIKEKSQYVETMLAK 114
>UNIPROTKB|Q8IKH3 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 151 (58.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 99/452 (21%), Positives = 182/452 (40%)
Query: 398 SSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTD------NHV---IA-- 446
S+ WL K K SA ASLG++ V+ + + D N++ +A
Sbjct: 522 SNIEWLSKAINWEKFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAPS 581
Query: 447 ------GALLGVGIVNCGIR-NDCDPALALLSEYVGR-EDACIRIGAIMGLGISYAGTQN 498
G+L +G+++ ND L+S+ D ++ G +GLG+ G N
Sbjct: 582 GVYSEGGSLYALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDSN 641
Query: 499 DQIRH-KLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEP 557
D+ + +L IL + A A ++GL+ +GS +++ ++ D ++
Sbjct: 642 DENTYDELKAILYSDSAVAGESA--AYAIGLLKLGSGDDKCIDELLAYAHDTQHEKI--- 696
Query: 558 XXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLK--VQN 615
K+ ++ E + + I +Y M ++ AY G N K ++
Sbjct: 697 -TRACSISLGFVMFQKEREADSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKK 755
Query: 616 LLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLAL 675
LL H + + + AV+ + V + L L++ ++R LAL
Sbjct: 756 LL-HFSVSDVSDDVRRA-AVIALGFVLCNSP---NQVPKFLNLLIESYNPHVRYGAALAL 810
Query: 676 GLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNN------ARIAGMLRNL 729
G+ C + ++ L L DT V +A ISLGLI +N + + +
Sbjct: 811 GIACSATANEEAINMLMPLLTDTTDFVRQSAFISLGLIFQQSNEHCNPNFKKYKEEIMKI 870
Query: 730 SSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRF-LLSPTALAGIVTTLFACLDMK 788
S ++D F ++ GL+ + G ++ + + R ++ P A AG LF+ L
Sbjct: 871 LSDKHEDIIAKFGAIVSAGLLDIC-GRNAISTFFTRRGNIIRPQAAAGFC--LFSQL--- 924
Query: 789 AVIVGKYHYVLYFLV-LAMQPRMLLTVDENLK 819
Y + L ++ L P L+ + E+LK
Sbjct: 925 -----WYWFPLIHMISLTFMPTCLIGLTEDLK 951
Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 244 IAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRK 284
+A IY E++ AL+ AL + +K+ + +L K
Sbjct: 74 LASKIYFHLEKYSEALKYALCAGKLFNIKEKSQYVETMLAK 114
>FB|FBgn0028692 [details] [associations]
symbol:Rpn2 "Regulatory particle non-ATPase 2" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 EMBL:AE014297 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006508 GO:GO:0050790
GO:GO:0006974 GO:GO:0004175 GO:GO:0042176 GO:GO:0008540
BRENDA:3.4.25.1 eggNOG:COG5116 GeneTree:ENSGT00550000074915
KO:K03032 OMA:CVENAEL Pfam:PF01851 EMBL:AF145303 EMBL:AF186594
EMBL:AF312231 EMBL:AY069503 EMBL:BT001598 EMBL:BT044102
RefSeq:NP_651677.2 UniGene:Dm.6875 ProteinModelPortal:Q9V3P6
SMR:Q9V3P6 IntAct:Q9V3P6 MINT:MINT-745147 STRING:Q9V3P6
PaxDb:Q9V3P6 PRIDE:Q9V3P6 EnsemblMetazoa:FBtr0085385 GeneID:43449
KEGG:dme:Dmel_CG11888 UCSC:CG11888-RA CTD:6185 FlyBase:FBgn0028692
InParanoid:Q9V3P6 OrthoDB:EOG4BVQ8J PhylomeDB:Q9V3P6
GenomeRNAi:43449 NextBio:834007 Bgee:Q9V3P6 GermOnline:CG11888
Uniprot:Q9V3P6
Length = 1020
Score = 139 (54.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 101/464 (21%), Positives = 180/464 (38%)
Query: 369 AATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDS 428
A NAF+++G D+ + D WL + K++A ASLG+I
Sbjct: 383 ATVIANAFMHSGTTSDQFLRDNLD---------WLARATNWAKLTATASLGVIHRGHEKD 433
Query: 429 GLAQIDKYFHS----TDNHVIAGALLGVGIVNCGI-RNDCDPALALLSEYVGREDACIRI 483
LA + Y + + GAL +G+++ N D LL + ++ +R
Sbjct: 434 SLALMQSYLPKEAGPSSGYSEGGALYALGLIHANHGANIID---YLLQQLKDAQNENVRH 490
Query: 484 GAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAII 543
G +GLG++ GT + +L L + A I++G++ +GS N AQAI
Sbjct: 491 GGCLGLGLAGMGTHRQDLYEQLKFNLYQDDAVTGEAA--GIAMGMVMLGSKN---AQAIE 545
Query: 544 FALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCA 603
+ E++ + +E+ +S + +R+ M ++ A
Sbjct: 546 DMVSYAQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDPVLRR-SGMYTIAMA 604
Query: 604 YAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYG 663
Y GTG+ ++ LL H A + + AV I + E + L +
Sbjct: 605 YNGTGSNKAIRKLL-HVAVSDVNDDVRRA-AVTAIGFILFRSP---EQCPSVVSLLAESY 659
Query: 664 EQNIRRAVPLALGLLCISNPKVNVMDTLSRL-SHDTDSEVAMAAVISLGLI------GSG 716
++R +ALG+ C + L + D + V A+I+ +I S
Sbjct: 660 NPHVRYGAAMALGIACAGTGLREAIALLEPMVKFDPVNFVRQGALIASAMILIQHTDQSC 719
Query: 717 TNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAG 776
+ + + S ++D + +AQG++ G TL+ L S T
Sbjct: 720 PKSTFFRQLYAEVISNKHEDVMAKYGAILAQGIIDAGGRNATLS-------LQSRTGH-- 770
Query: 777 IVTTLFACLDMKAVIVGKYHYVL-YFLVLAMQPRMLLTVDENLK 819
T L A + M A Y + L + L LA P ++ ++ +LK
Sbjct: 771 --TNLQAVVGMLAFTQYWYWFPLAHTLSLAFTPTCVIGLNSDLK 812
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/73 (24%), Positives = 28/73 (38%)
Query: 225 YLTSAAKYLPGPDDMLVLD------IAYMIY--LKFEEFPNALQIALFLDNMQYVKQIFT 276
Y+ +++ P + V+D + MI L +F AL IAL M K
Sbjct: 109 YIAQRVEFIENPKEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIM 168
Query: 277 SCDDLLRKKQFCY 289
DD+ + Y
Sbjct: 169 KSDDVRGMLAYAY 181
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 872 781 0.00094 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 619 (66 KB)
Total size of DFA: 355 KB (2178 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.71u 0.09s 59.80t Elapsed: 00:00:02
Total cpu time: 59.73u 0.09s 59.82t Elapsed: 00:00:02
Start: Thu May 9 20:15:47 2013 End: Thu May 9 20:15:49 2013