Query 002872
Match_columns 872
No_of_seqs 260 out of 868
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 04:52:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002872.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002872hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kmv_A Alpha-L-arabinofuranosi 99.8 8.7E-21 3E-25 186.7 10.5 112 734-854 8-120 (157)
2 1wd3_A Alpha-L-arabinofuranosi 99.8 1.9E-21 6.5E-26 216.2 1.2 153 699-868 296-453 (482)
3 3kmv_A Alpha-L-arabinofuranosi 99.7 9.5E-17 3.3E-21 158.0 11.3 125 689-837 23-150 (157)
4 3akh_A Putative secreted alpha 99.3 3.9E-12 1.3E-16 146.1 10.9 126 725-860 311-437 (468)
5 1wd3_A Alpha-L-arabinofuranosi 99.2 2.6E-11 8.9E-16 135.4 10.9 149 667-835 324-481 (482)
6 3akh_A Putative secreted alpha 99.1 1.5E-10 5.3E-15 132.9 12.2 135 675-835 322-459 (468)
7 3k7x_A LIN0763 protein; Q92DQ0 98.7 4.5E-07 1.5E-11 100.4 19.3 221 182-446 48-295 (349)
8 2gz6_A N-acetyl-D-glucosamine 98.7 3.9E-07 1.3E-11 101.1 18.8 276 181-468 54-355 (388)
9 2ahf_A Unsaturated glucuronyl 98.6 2.8E-06 9.6E-11 95.0 20.7 234 182-447 44-315 (377)
10 2zzr_A Unsaturated glucuronyl 98.5 5.2E-06 1.8E-10 93.4 21.8 230 182-447 70-340 (397)
11 3pmm_A Putative cytoplasmic pr 98.4 2.1E-06 7.3E-11 96.1 16.1 227 182-456 70-335 (382)
12 3k7x_A LIN0763 protein; Q92DQ0 98.4 2.7E-06 9.1E-11 94.3 14.2 185 242-452 43-247 (349)
13 3gt5_A N-acetylglucosamine 2-e 98.3 1.6E-05 5.5E-10 89.3 19.9 250 182-446 54-339 (402)
14 2zbl_A Putative isomerase; N-a 98.2 4.3E-05 1.5E-09 86.3 18.3 272 181-468 52-367 (421)
15 2gz6_A N-acetyl-D-glucosamine 98.1 1.8E-05 6.2E-10 87.7 14.0 192 182-383 117-337 (388)
16 1nc5_A Hypothetical protein YT 98.1 2.6E-05 9E-10 86.8 14.5 228 182-452 43-313 (373)
17 3k11_A Putative glycosyl hydro 98.1 2.6E-05 8.8E-10 88.9 14.1 301 116-455 20-366 (445)
18 3gt5_A N-acetylglucosamine 2-e 97.9 8.1E-05 2.8E-09 83.6 15.0 193 184-384 117-344 (402)
19 1fp3_A N-acyl-D-glucosamine 2- 97.8 0.00018 6.3E-09 80.2 15.7 271 182-467 58-364 (402)
20 2ahf_A Unsaturated glucuronyl 97.8 0.00038 1.3E-08 77.8 17.1 242 180-435 87-367 (377)
21 1nc5_A Hypothetical protein YT 97.7 0.00022 7.5E-09 79.4 13.4 171 267-461 13-186 (373)
22 2zzr_A Unsaturated glucuronyl 97.7 0.00053 1.8E-08 77.1 15.7 235 188-435 122-392 (397)
23 3pmm_A Putative cytoplasmic pr 97.6 0.00036 1.2E-08 78.1 13.5 244 197-471 23-290 (382)
24 2zbl_A Putative isomerase; N-a 97.4 0.00098 3.3E-08 75.2 13.3 194 184-383 115-349 (421)
25 1fp3_A N-acyl-D-glucosamine 2- 97.2 0.0029 1E-07 70.4 13.6 185 183-384 125-348 (402)
26 3h7l_A Endoglucanase; dehydrog 96.2 0.064 2.2E-06 63.0 16.0 252 199-469 190-496 (586)
27 1nxc_A Mannosyl-oligosaccharid 96.0 0.047 1.6E-06 62.7 13.7 206 251-467 110-353 (478)
28 3k11_A Putative glycosyl hydro 95.6 0.06 2E-06 61.4 12.2 249 197-467 28-317 (445)
29 1dl2_A Class I alpha-1,2-manno 95.4 0.15 5.3E-06 58.9 14.5 246 179-447 48-345 (511)
30 3e6u_A LANC-like protein 1; al 95.3 0.076 2.6E-06 59.7 11.6 190 182-384 167-369 (411)
31 1ks8_A Endo-B-1,4-glucanase; c 94.0 2 6.8E-05 48.7 19.1 227 198-453 89-341 (433)
32 1x9d_A Endoplasmic reticulum m 93.8 0.62 2.1E-05 54.2 14.5 186 251-445 174-391 (538)
33 1nxc_A Mannosyl-oligosaccharid 92.7 0.2 6.7E-06 57.6 8.0 193 193-395 186-412 (478)
34 1ia6_A Cellulase CEL9M; cellul 92.2 6.3 0.00022 44.7 19.5 240 198-469 91-355 (441)
35 1x9d_A Endoplasmic reticulum m 92.0 0.85 2.9E-05 53.0 12.3 191 194-395 249-479 (538)
36 3e6u_A LANC-like protein 1; al 91.8 0.57 1.9E-05 52.6 10.3 129 185-330 236-365 (411)
37 1hcu_A Alpha-1,2-mannosidase; 91.6 1 3.6E-05 52.0 12.3 187 251-446 105-336 (503)
38 1g87_A Endocellulase 9G; endog 91.4 8.4 0.00029 45.5 20.1 173 198-383 90-290 (614)
39 2ri9_A Mannosyl-oligosaccharid 91.3 1.6 5.3E-05 50.2 13.3 187 251-446 92-323 (475)
40 2ri9_A Mannosyl-oligosaccharid 90.9 1.2 4.1E-05 51.1 11.9 192 194-395 176-414 (475)
41 1tf4_A T. fusca endo/EXO-cellu 90.8 6.4 0.00022 46.4 18.4 175 198-383 90-292 (605)
42 2g0d_A Nisin biosynthesis prot 90.3 3.7 0.00013 45.4 15.0 181 186-377 140-352 (409)
43 2xfg_A Endoglucanase 1; hydrol 90.3 14 0.00047 42.2 19.9 243 198-470 111-389 (466)
44 1dl2_A Class I alpha-1,2-manno 90.0 0.86 2.9E-05 52.7 9.7 191 194-392 187-434 (511)
45 1hcu_A Alpha-1,2-mannosidase; 88.0 2.1 7.1E-05 49.5 11.0 192 194-395 190-433 (503)
46 1ut9_A Cellulose 1,4-beta-cell 85.1 62 0.0021 38.1 21.8 126 199-329 227-381 (609)
47 2g0d_A Nisin biosynthesis prot 82.3 9.5 0.00032 42.1 12.7 132 185-328 211-353 (409)
48 3gzk_A Cellulase; fold from GH 81.9 6.3 0.00022 45.8 11.4 127 199-329 188-333 (537)
49 2yug_A Protein FRG1; spliceoso 76.7 20 0.00068 34.7 11.4 92 685-800 34-127 (155)
50 2v8i_A Pectate lyase; periplas 76.6 4.1 0.00014 46.1 7.1 72 252-328 379-454 (543)
51 3h7l_A Endoglucanase; dehydrog 76.4 11 0.00037 44.3 11.1 122 183-325 251-388 (586)
52 1clc_A Endoglucanase CELD; EC: 74.3 7.8 0.00027 46.0 9.3 125 199-329 232-377 (639)
53 2yik_A Endoglucanase; hydrolas 73.5 13 0.00045 43.9 10.9 62 265-329 242-306 (611)
54 2kll_A Interleukin-33; beta-tr 65.9 91 0.0031 29.5 16.3 114 670-800 19-134 (161)
55 1r76_A Pectate lyase; A-helica 63.9 1.2E+02 0.004 34.0 15.3 154 63-227 19-197 (408)
56 2v8i_A Pectate lyase; periplas 61.1 23 0.00078 40.3 8.8 87 182-281 375-461 (543)
57 1ia6_A Cellulase CEL9M; cellul 49.5 49 0.0017 37.3 9.5 121 184-327 212-335 (441)
58 1ks8_A Endo-B-1,4-glucanase; c 47.3 55 0.0019 36.8 9.4 119 184-327 214-333 (433)
59 2w87_A Esterase D, XYL-CBM35; 44.7 69 0.0024 30.0 8.3 38 551-589 40-78 (139)
60 2wry_A IL-1 beta, interleukin- 32.3 30 0.001 33.9 3.6 37 771-812 110-146 (162)
61 2nvh_A IL-1 beta, interleukin- 31.6 20 0.0007 34.8 2.2 28 783-812 108-135 (153)
62 2ila_A Interleukin-1 alpha; cy 30.8 20 0.00067 35.0 1.9 26 783-812 114-139 (155)
63 1md6_A Interleukin 1 family, m 30.4 21 0.0007 34.8 2.0 27 784-812 107-133 (154)
64 2w3j_A Carbohydrate binding mo 29.5 2.9E+02 0.0099 25.9 10.0 38 551-589 40-78 (145)
65 1gxm_A Pectate lyase; mechanis 28.5 1.5E+02 0.0051 32.3 8.5 91 182-281 76-181 (332)
66 3llp_A Fascin; beta-trefoil, a 27.9 4.8E+02 0.016 29.8 13.1 51 744-800 226-276 (493)
67 1ilt_A Interleukin-1 receptor 26.6 24 0.00082 34.3 1.7 27 784-812 108-134 (152)
68 2w47_A Lipolytic enzyme, G-D-S 25.9 2E+02 0.0068 26.7 8.1 37 551-588 41-78 (144)
69 1dm9_A Hypothetical 15.5 KD pr 22.8 95 0.0032 29.1 5.1 34 581-623 35-68 (133)
70 3gzk_A Cellulase; fold from GH 22.4 1.9E+02 0.0066 33.3 8.6 75 359-445 252-332 (537)
71 2x2s_A Agglutinin, agglutinin 21.6 1.7E+02 0.0058 28.2 6.4 45 767-812 92-138 (153)
72 3ltq_A Interleukin-1 beta; lan 21.6 40 0.0014 33.4 2.2 28 783-812 126-153 (171)
No 1
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.83 E-value=8.7e-21 Score=186.72 Aligned_cols=112 Identities=21% Similarity=0.327 Sum_probs=100.8
Q ss_pred CcccccCCCCCCCceEEeecCCceEEEecCCCCCCCceEEEeeccCCCC-CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002872 734 GKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGD-RTVSLESETYKGCFVYTAVNLQSSESTKLG 812 (872)
Q Consensus 734 g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~-g~vsles~~~pg~~~~~~~~~~~g~~~~l~ 812 (872)
++.|+|+++++|++||||++..+ ++++++...+|++|++||||++.+ |+|||||+++||+|||+. |..|+|+
T Consensus 8 ~~~vsl~S~n~p~~ylRh~~~~~--~~~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh~-----~~~l~L~ 80 (157)
T 3kmv_A 8 ITKAKFQSYNYPNMYIRHANFDA--RIDENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRHS-----NYDLSLE 80 (157)
T ss_dssp --CBEEEESSSTTCEEEEETTEE--EEESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEEE-----TTEEEEE
T ss_pred CccEEEEecCCCCcEEEEeCCeE--EEccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEEe-----CCEEEEe
Confidence 45789999999999999997765 667777778999999999998865 899999999999999996 8999999
Q ss_pred eecCCCccccccccceecccCCCccCCccEEEecCCCcchhc
Q 002872 813 CISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLA 854 (872)
Q Consensus 813 ~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll~ 854 (872)
+ .++++.|+++|+|..++||++..++||++...++.||..
T Consensus 81 ~--~~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh 120 (157)
T 3kmv_A 81 K--NDGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRH 120 (157)
T ss_dssp E--CCSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEE
T ss_pred c--cCCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEE
Confidence 6 578889999999999999999999999999999999976
No 2
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.81 E-value=1.9e-21 Score=216.17 Aligned_cols=153 Identities=16% Similarity=0.169 Sum_probs=126.1
Q ss_pred eecCCCCCccccceEEEEEecCCCCCccccccCCCCcccccCCCC--CCCceEEeecCCceEEEecCC---CCCCCceEE
Q 002872 699 EKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFD--SPGMLVIQHETDDELVVTDSF---IAQGSSVFH 773 (872)
Q Consensus 699 ~~~p~~gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~--~p~~~v~~~~~~~~l~v~~~~---~~~~~s~f~ 773 (872)
...|.+|||.++||+||.+-..+.+ ....|.-..|..|+|++.+ +|++||||.+...+|....+. ....|++|+
T Consensus 296 ~~~Psd~Td~aVqAnivAa~y~~~s-~~s~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~ 374 (482)
T 1wd3_A 296 SGYPSDDTENSVQENIVAAKYVVGS-LVSGPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWT 374 (482)
T ss_dssp SSCCCHHHHHHHHHHHHHHCEEECC-CCCSSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEE
T ss_pred ecCCChHHHHHHhhceeeeeccCCc-cccCCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEE
Confidence 4568899999999999955222222 4455666889999999888 999999999665544332221 234689999
Q ss_pred EeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeecCCCccccccccceecccCCCccCCccEEEecCCCcchh
Q 002872 774 LVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLL 853 (872)
Q Consensus 774 ~vpgl~g~~g~vsles~~~pg~~~~~~~~~~~g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll 853 (872)
+||||++ +++|||||+++||+||||. +.+|+|+ + .++++.|+++|||..++||++++ +||++.+
T Consensus 375 VVpGLAd-~g~VSFES~n~PG~YLRH~-----n~~LrL~-~-~DgS~~FrqDATF~~~~GL~~~g-vSFeS~n------- 438 (482)
T 1wd3_A 375 VVTGLAN-SQCFSFESVDTPGSYIRHY-----NFELLLN-A-NDGTKQFHEDATFCPQAALNGEG-TSLRSWS------- 438 (482)
T ss_dssp EEECSSC-TTSEEEEESSSTTEEEEEE-----TTEEEEE-E-CCCCHHHHHHTCEEEEECTTSSS-EEEEESS-------
T ss_pred EeccccC-CCeEEEEecCCCCceEEEe-----CCEEEEe-c-CCCCcccccCceeEeccCCCCCc-eeEEEEC-------
Confidence 9999998 7999999999999999996 8899999 4 48888999999999999999988 9999998
Q ss_pred cccccccccceEEEE
Q 002872 854 APLLSLRDESYTVYF 868 (872)
Q Consensus 854 ~pl~~~~~~~~~~~~ 868 (872)
.|..-||++.|++|-
T Consensus 439 ~PgrYLRH~n~~Lyl 453 (482)
T 1wd3_A 439 YPTRYFRHYENVLYA 453 (482)
T ss_dssp STTCEEEEETTEEEE
T ss_pred CCCcEEEEeCCEEEE
Confidence 788888999999997
No 3
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.68 E-value=9.5e-17 Score=158.03 Aligned_cols=125 Identities=14% Similarity=0.181 Sum_probs=94.1
Q ss_pred EeecCCceeeeecCCCCCccccceEEEEEecCCCCCccccccCCCCcccccCCCCCCCceEEeecCCceEEEecCCCC--
Q 002872 689 LTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIA-- 766 (872)
Q Consensus 689 ~~~~~~~~~~~~~p~~gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~-- 766 (872)
+...+..+.+.. +....-.|+||++.+-.++ .+-.|++|+.++|++||||+|.++ +|+.+..+
T Consensus 23 lRh~~~~~~~~~----~~~~~~datF~vvpGLa~~---------~~g~VSfES~n~Pg~yLRh~~~~l--~L~~~~~s~~ 87 (157)
T 3kmv_A 23 IRHANFDARIDE----NVTPEMDSQWELVPGLANS---------GDGYVSIQSVNYPGYYLRHSNYDL--SLEKNDGTSL 87 (157)
T ss_dssp EEEETTEEEEES----SCSSGGGGCEEEEECSSCC---------STTEEEEEESSSTTEEEEEETTEE--EEEECCSCHH
T ss_pred EEEeCCeEEEcc----CCCCccCceEEEeCCcCCC---------CCCEEEEEECCCCCcEEEEeCCEE--EEeccCCCCC
Confidence 344555655543 2334678999999642222 113689999999999999996655 66654443
Q ss_pred -CCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeecCCCccccccccceecccCCCcc
Q 002872 767 -QGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEY 837 (872)
Q Consensus 767 -~~~s~f~~vpgl~g~~g~vsles~~~pg~~~~~~~~~~~g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y 837 (872)
.+|++|++||||++ +|.|||||.++||||||+. |..++|+| . +++.|+++|||...+|.-+-
T Consensus 88 f~~dATF~~~~GLa~-~~~vSfeS~n~Pg~yLrh~-----~~~l~l~~--~-~t~~fr~dATF~~~~~~~~~ 150 (157)
T 3kmv_A 88 FAESATFKIVPGLAD-PSYISFQSYNFPTRYIRHY-----NYLLRLDE--I-VTELDRQDATFKIISEDTQL 150 (157)
T ss_dssp HHHTTCEEEEECSSC-TTSEEEEESSSTTEEEEEE-----TTEEEEEE--C-CSHHHHHHTCEEEEC-----
T ss_pred ccCCceEEEccCccC-CCcEEEEEEcCCCeEEEEE-----CCEEEEec--C-CCchhccCCeEEEecCcchh
Confidence 47899999999999 7999999999999999997 88999997 3 68889999999999997653
No 4
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=99.31 E-value=3.9e-12 Score=146.13 Aligned_cols=126 Identities=22% Similarity=0.284 Sum_probs=108.7
Q ss_pred ccccccCCCCcccccCCCCCCCceEEeecCCceEEEecCCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccC
Q 002872 725 EFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQ 804 (872)
Q Consensus 725 ~~~~p~~~~g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~g~vsles~~~pg~~~~~~~~~~ 804 (872)
.+..|...+.+.+++++.+.|+.||||.+ ..|+++.+.....+++|++||||++ +++|||||+++||.|||+.
T Consensus 311 ~~~~~~~~g~~~~s~~s~~~pg~ylrh~~--~~v~l~~~~~~~~d~tf~~~~gl~~-~~~~s~~s~~ypg~~lr~~---- 383 (468)
T 3akh_A 311 NFGIPVADGVTPVRFSSYNYPDRYIRHWD--FRARIEANVTNLADSQFRVVTGLAG-SGTISLESANYPGYYLRHK---- 383 (468)
T ss_dssp ECCCCCCSEECCBCEEESSSTTCEEEEET--TEEEEESSCSSGGGGCEEEEECTTC-TTCEEEEESSSTTEEEEEE----
T ss_pred EeccccccCccccccccccccccEEEEec--CcEEEccCCCCcccceEEEccCCCC-CceEEEEEEeCCCeEEEEE----
Confidence 46667777777889999999999999984 4578887766678999999999988 6999999999999999996
Q ss_pred CCCcEEEEeecCCCccccccccceecccCCCcc-CCccEEEecCCCcchhccccccc
Q 002872 805 SSESTKLGCISESTEAGFNNAASFVIEKGLSEY-HPISFVAKGANRNFLLAPLLSLR 860 (872)
Q Consensus 805 ~g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y-~piSf~a~g~~~~~ll~pl~~~~ 860 (872)
+..|+|+ + .++++.|.++|+|++++||++- ..+||+....+..||.+==++|+
T Consensus 384 -~~~~~~~-~-~~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~~~~l~ 437 (468)
T 3akh_A 384 -NYEVWVE-K-NDGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHYENLLR 437 (468)
T ss_dssp -TTEEEEE-E-CCSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEETTEEE
T ss_pred -CCEEEEe-c-CCCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEeCCeEE
Confidence 7799999 3 4777889999999999999997 89999999999999875444443
No 5
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.21 E-value=2.6e-11 Score=135.39 Aligned_cols=149 Identities=18% Similarity=0.266 Sum_probs=109.9
Q ss_pred ccCCCCCcceeeeeec-CCceEEEeecCCceeeeecCC-CCCccccceEEEEEecCCCCCccccccCCCCcccccCCCCC
Q 002872 667 IPASYNSQLITFTQEY-GNTKFVLTNSNQSITMEKFPK-SGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDS 744 (872)
Q Consensus 667 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~-~gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~ 744 (872)
.|.......++|+-.+ +.+.+.|.+.++.+.+++... ..+...-+|+|+++.+-.+ ...|++|+.+.
T Consensus 324 ~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~VVpGLAd-----------~g~VSFES~n~ 392 (482)
T 1wd3_A 324 GPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLAN-----------SQCFSFESVDT 392 (482)
T ss_dssp SSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSC-----------TTSEEEEESSS
T ss_pred CCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEEEeccccC-----------CCeEEEEecCC
Confidence 4544456678886654 334456668888887776533 2234466899999964222 23589999999
Q ss_pred CCceEEeecCCceEEEecCCC---CCCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEee----cCC
Q 002872 745 PGMLVIQHETDDELVVTDSFI---AQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCI----SES 817 (872)
Q Consensus 745 p~~~v~~~~~~~~l~v~~~~~---~~~~s~f~~vpgl~g~~g~vsles~~~pg~~~~~~~~~~~g~~~~l~~~----~~~ 817 (872)
|+.||||. +..|+|+++.. -..|+.|++++||.+ .| |||||.++||.||||. +..|.|.-. .-+
T Consensus 393 PG~YLRH~--n~~LrL~~~DgS~~FrqDATF~~~~GL~~-~g-vSFeS~n~PgrYLRH~-----n~~Lyla~~gg~~~~d 463 (482)
T 1wd3_A 393 PGSYIRHY--NFELLLNANDGTKQFHEDATFCPQAALNG-EG-TSLRSWSYPTRYFRHY-----ENVLYAASNGGVQTFD 463 (482)
T ss_dssp TTEEEEEE--TTEEEEEECCCCHHHHHHTCEEEEECTTS-SS-EEEEESSSTTCEEEEE-----TTEEEEECSSCSSGGG
T ss_pred CCceEEEe--CCEEEEecCCCCcccccCceeEeccCCCC-Cc-eeEEEECCCCcEEEEe-----CCEEEEecCCCccccc
Confidence 99999998 45667776543 236899999999988 56 9999999999999997 778999520 124
Q ss_pred CccccccccceecccCCC
Q 002872 818 TEAGFNNAASFVIEKGLS 835 (872)
Q Consensus 818 ~~~~f~~~asF~~~~gl~ 835 (872)
+++.|++++||+...|++
T Consensus 464 ~t~~f~~DaTF~v~~pwA 481 (482)
T 1wd3_A 464 SKTSFNNDVSFEIETAFA 481 (482)
T ss_dssp CSTTHHHHTCEEEEECTT
T ss_pred CcccccCCceEEeccCCC
Confidence 567799999999999876
No 6
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=99.13 E-value=1.5e-10 Score=132.87 Aligned_cols=135 Identities=18% Similarity=0.224 Sum_probs=98.2
Q ss_pred ceeeeeecCCceEEEeecCCceeeeecCCCCCccccceEEEEEecCCCCCccccccCCCCcccccCCCCCCCceEEeecC
Q 002872 675 LITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHET 754 (872)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~p~~~v~~~~~ 754 (872)
++++....-...|. .+.++.|.++.- ++ ....++||++.+-.+ ...+++++.++|+.|+||+
T Consensus 322 ~~s~~s~~~pg~yl-rh~~~~v~l~~~---~~-~~~d~tf~~~~gl~~-----------~~~~s~~s~~ypg~~lr~~-- 383 (468)
T 3akh_A 322 PVRFSSYNYPDRYI-RHWDFRARIEAN---VT-NLADSQFRVVTGLAG-----------SGTISLESANYPGYYLRHK-- 383 (468)
T ss_dssp CBCEEESSSTTCEE-EEETTEEEEESS---CS-SGGGGCEEEEECTTC-----------TTCEEEEESSSTTEEEEEE--
T ss_pred ccccccccccccEE-EEecCcEEEccC---CC-CcccceEEEccCCCC-----------CceEEEEEEeCCCeEEEEE--
Confidence 44554433233554 366677777652 33 368999998853111 2347999999999999998
Q ss_pred CceEEEecCCCC---CCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeecCCCccccccccceecc
Q 002872 755 DDELVVTDSFIA---QGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIE 831 (872)
Q Consensus 755 ~~~l~v~~~~~~---~~~s~f~~vpgl~g~~g~vsles~~~pg~~~~~~~~~~~g~~~~l~~~~~~~~~~f~~~asF~~~ 831 (872)
|..|+|++...+ .+|+.|++||||++..+.|||||+++||.|||+. +..|+|+ + .+++.|+++|+|+..
T Consensus 384 ~~~~~~~~~~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~-----~~~l~~~-~--~~~~~~~~~atf~~~ 455 (468)
T 3akh_A 384 NYEVWVEKNDGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHY-----ENLLRIQ-P--VSTALDRQDATFYAE 455 (468)
T ss_dssp TTEEEEEECCSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEE-----TTEEEEE-E--CCSHHHHHHTCEEEC
T ss_pred CCEEEEecCCCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEe-----CCeEEEc-c--CCCchhcccceeeec
Confidence 556688754432 3689999999999844899999999999999997 7789999 3 346779999999999
Q ss_pred cCCC
Q 002872 832 KGLS 835 (872)
Q Consensus 832 ~gl~ 835 (872)
+++.
T Consensus 456 ~~~~ 459 (468)
T 3akh_A 456 KLAA 459 (468)
T ss_dssp C---
T ss_pred cchh
Confidence 8864
No 7
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=98.70 E-value=4.5e-07 Score=100.43 Aligned_cols=221 Identities=12% Similarity=0.058 Sum_probs=135.3
Q ss_pred hhHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcce-ecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHH
Q 002872 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYL-SAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYT 260 (872)
Q Consensus 182 ~GhyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL-~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~ 260 (872)
.++.+.++..+|..|+|+++++.+.+.+..+... .+|++ ..+ .|.. .. +..+++++|+
T Consensus 48 ~a~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~----~~~~~~~~~----~DD~-----------a~--~~la~~~aye 106 (349)
T 3k7x_A 48 LAHLVEVRLDAYLRTKKQADLEVAEKTYLHNKNR----NGGTLIHDF----YDDM-----------LW--NALAAYRLYK 106 (349)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH----TTSSSCCSB----HHHH-----------HH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc----CCCCCCccC----ccHH-----------HH--HHHHHHHHHH
Confidence 3555799999999999999999999988877652 22332 222 1211 11 2246789999
Q ss_pred HcCChhHHHHHHHHHHHH-HHHhhhhhhccccccccccc------cccccchHHHHHHHHHHcCCHHHHHHhhhccc---
Q 002872 261 YADNAEALRMTTWMVEYF-YNRVQNVIKKYSIERHWQTL------NEEAGGMNDVLYKLFCITQDPKHLMLAHLFDK--- 330 (872)
Q Consensus 261 ~tG~~~aL~va~~~ad~~-~~~~~~~~~~~~~~~~~~~l------~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~--- 330 (872)
.||+++.|++|..+.+++ ..++.+...+ .-.|..- ...-|.+-.++++||++|||++||+.|++..+
T Consensus 107 ~t~~~~yL~~A~~l~~~l~~~~wd~~~gG---Gi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~ 183 (349)
T 3k7x_A 107 ATGKSIYLEDAQLVWQDLVDTGWNDIMGG---GFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQT 183 (349)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTBCSGGGS---CBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHCCchHHHHHHHHHHHHHHhCCCCCCCC---ceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999999999999 6665432211 0112211 01122345799999999999999999986421
Q ss_pred ccccchhhccCCCCC----------CCcccCCcchhhHHHHHHHHhCChHHHHHHHHHHHHHhccCeeeecCCCCCCCCC
Q 002872 331 PCFLGLLALQADDIS----------GFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWS 400 (872)
Q Consensus 331 ~~~~~~l~~~~D~l~----------g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~Y~TGG~g~~E~f~ 400 (872)
..++++...=.|.+. ..++..+.-.+.|.+.+|++|||+.|++.++...+.+.+ +.. .+|+=..
T Consensus 184 ~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~-~f~-~~gi~~~---- 257 (349)
T 3k7x_A 184 KVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTAAISLK-ELT-EDGIFKD---- 257 (349)
T ss_dssp HHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHE-ETTEECC----
T ss_pred hcCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH-Hhc-cCCcccC----
Confidence 122222100001111 112222233457789999999999999999999988764 333 3333111
Q ss_pred CCcccccCCCCCccccc----chHH--HHHHHHHHhcccCCchhHHHHHHHH
Q 002872 401 DPKRLASNLDSNTEESC----TTYN--MLKVSRHLFRWTKEIAYADYYERSL 446 (872)
Q Consensus 401 ~p~~L~~~l~~~~~ETC----as~n--mlkl~~~Lf~~tgd~~YaD~~ERaL 446 (872)
|.| .+.+ +++....|.+++++..|.+++++.+
T Consensus 258 --------------~~~~~D~~sFkgi~~r~L~~l~~~~p~~~~~~~l~~sa 295 (349)
T 3k7x_A 258 --------------EGNGGDEGLFKGIFYRYFTDLIEETANKTYRDFVLNSC 295 (349)
T ss_dssp --------------CCSSSGGGGHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred --------------CCCCccHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHH
Confidence 112 1222 3334445556677777777776655
No 8
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.69 E-value=3.9e-07 Score=101.09 Aligned_cols=276 Identities=10% Similarity=-0.023 Sum_probs=152.6
Q ss_pred hhhHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHHH-HhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHH
Q 002872 181 FVGHYLSASALMWAS-THNESLKEKMSAVVSALSAC-QKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQ 258 (872)
Q Consensus 181 ~~GhyLsA~A~~~a~-t~D~~L~~k~d~~Vd~L~~~-Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~ 258 (872)
.-+..|.+.|.+|.. ++|+++++.++..++.|.+. +.. +.|+..+....- +.+.. -...|..-.+..|+..+
T Consensus 54 ~nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~-~Gg~~~~~d~dg----~~~~~-~~~~~~~af~i~al~~~ 127 (388)
T 2gz6_A 54 LQNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDD-EGNWYFALTRGG----EPLVQ-PYNIFSDCFAAMAFSQY 127 (388)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCT-TSCBCSEECTTS----CBCCC-CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCC-CCCEEEEEcCCC----CcccC-CcchHHHHHHHHHHHHH
Confidence 357778889999998 89999999999999999987 441 235554432110 00000 01112222355678899
Q ss_pred HHHcCChhHHHHHHHHHHHHHHHhhhhhhcccccc--ccccccc-c-ccchHHHHHHHHHHcCCHHHHHHhhhccc---c
Q 002872 259 YTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIER--HWQTLNE-E-AGGMNDVLYKLFCITQDPKHLMLAHLFDK---P 331 (872)
Q Consensus 259 y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~~--~~~~l~~-E-~GGmneaL~~LY~~TGd~ryL~lA~~F~~---~ 331 (872)
|++||+++.|+.|.++++++.+++.+. .++-... .+..... + ..-+.++|.+||++|||++|++.|+...+ .
T Consensus 128 y~~tg~~~~l~~A~~~~~~i~~~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~ 206 (388)
T 2gz6_A 128 ALASGEEWAKDVAMQAYNNVLRRKDNP-KGKYTKTYPGTRPMKALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMG 206 (388)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTC---------------CCCCEETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCC-CcccCcccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999998766321 1110000 0000000 0 00123688999999999999998876532 1
Q ss_pred cccchhh------ccCC--CCCCCcccCCcch--hh---HHHHHHHHhCChHHHHHHHHHHHHHhccCeee--ecCCCCC
Q 002872 332 CFLGLLA------LQAD--DISGFHSNTHIPI--VI---GSQMRYEVTGDQLHKTISMFFMDIVNSSHTYA--TGGTSVG 396 (872)
Q Consensus 332 ~~~~~l~------~~~D--~l~g~HanthiP~--~~---G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~Y~--TGG~g~~ 396 (872)
.|.++.. ...| .+.........|- ++ -..+.+++|||+.|+++++..++.+.+ +.+- +||+-..
T Consensus 207 ~~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~-~g~d~~~Gg~~~~ 285 (388)
T 2gz6_A 207 DFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILN-FAWDNEYGGLYYF 285 (388)
T ss_dssp TTEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHBCTTTCSBCSC
T ss_pred HHhccCCCeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhccCCCCCEEEe
Confidence 1211110 0000 0000000111111 11 134457899999999998887777653 2221 2443211
Q ss_pred CCC-CCCcccccCCCCCcccccchHHHHHHHHHHhcccCCchhHHHHHHHHhhhhccc-CCCCCCCcEEEeccC
Q 002872 397 EFW-SDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGI-QRGTEPGVMIYLLPL 468 (872)
Q Consensus 397 E~f-~~p~~L~~~l~~~~~ETCas~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~-q~~~d~g~~~Y~~PL 468 (872)
-.+ +.| +. .+.....-.+...+.+.-.-.+++.|||.+|.+.++++. +-+... .++..++-|.+.++-
T Consensus 286 ~~~~g~~--~~-~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~-~~~~~~~~D~~~G~w~~~l~~~ 355 (388)
T 2gz6_A 286 MDAAGHP--PQ-QLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMH-DYSWQHFADPEYGEWFGYLNRR 355 (388)
T ss_dssp EETTSCC--CS-CTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHHBCTTTSSBCCEECTT
T ss_pred ecCCCCc--cc-cCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCcCCCCCceEEeeCCC
Confidence 001 111 00 001123334556677888888999999999999998864 333332 233344556666554
No 9
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=98.56 E-value=2.8e-06 Score=95.02 Aligned_cols=234 Identities=12% Similarity=0.084 Sum_probs=137.6
Q ss_pred hhHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHH
Q 002872 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (872)
Q Consensus 182 ~GhyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~ 261 (872)
-|=|.-.+-++|..|+|+++++.+..+.+.|.+.-.+ + +.+ .+.+ .+=.++..+...|+.
T Consensus 44 ~GF~~g~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~--~--~~~-----------~~HD-----~Gf~~~~s~~~~y~l 103 (377)
T 2ahf_A 44 DGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDR--F--ENL-----------DHHN-----IGFLYSLSAKAQWIV 103 (377)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTT--T--TTC-----------CBST-----HHHHHHTTHHHHHHH
T ss_pred cchHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhc--c--cCC-----------CCCC-----chHhhHHHHHHHHHH
Confidence 3666667789999999999999999998888754220 0 000 0001 111123345678999
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhh---hhcccc---ccc--cccccccccchH-HHHHHHHHHcCCHHHHHHhhhc---c
Q 002872 262 ADNAEALRMTTWMVEYFYNRVQNV---IKKYSI---ERH--WQTLNEEAGGMN-DVLYKLFCITQDPKHLMLAHLF---D 329 (872)
Q Consensus 262 tG~~~aL~va~~~ad~~~~~~~~~---~~~~~~---~~~--~~~l~~E~GGmn-eaL~~LY~~TGd~ryL~lA~~F---~ 329 (872)
|||+++++++...|+++..|+.+. |+.... ..+ +.++.+- || ..|++.+++|||++|++.|..- .
T Consensus 104 tg~~~~~~~~~~aA~~L~~r~~~~~g~i~sw~~~~~~~~~~~~iID~m---mni~~L~~A~~~~gd~~y~~~A~~~a~~~ 180 (377)
T 2ahf_A 104 EKDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCL---LNLPLLLWAGEQTGDPEYRRVAEAHALKS 180 (377)
T ss_dssp HCCHHHHHHHHHHHHHHHTTEETTTTEECCBSSTTCTTTTTEEEGGGG---GGHHHHHHHHHHHCCTHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHhCCCCCCeEEeccCCCCCCCCceEEechH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999999999988632 222210 000 1122222 33 6899999999999999999762 1
Q ss_pred cccccch---h--hccCCCCCCC--cccC-------------CcchhhHHHHHHHHhCChHHHHHHHHHHHHHhccCeee
Q 002872 330 KPCFLGL---L--ALQADDISGF--HSNT-------------HIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYA 389 (872)
Q Consensus 330 ~~~~~~~---l--~~~~D~l~g~--Hant-------------hiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~Y~ 389 (872)
-...+.+ + ...-|...|. |-.+ +-=.+.|.+..|+.|+|++|++.++..-+.+.++ . .
T Consensus 181 l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~-~-~ 258 (377)
T 2ahf_A 181 RRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLAR-V-P 258 (377)
T ss_dssp HHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-C-C
T ss_pred HHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHh-h-H
Confidence 1111100 0 0001111111 1111 1113578899999999999999999988887753 3 2
Q ss_pred ecCCCCCCCCCCC-cccccCCCCCcccccchHHHHHHHHHHhcccC-----CchhHHHHHHHHh
Q 002872 390 TGGTSVGEFWSDP-KRLASNLDSNTEESCTTYNMLKVSRHLFRWTK-----EIAYADYYERSLT 447 (872)
Q Consensus 390 TGG~g~~E~f~~p-~~L~~~l~~~~~ETCas~nmlkl~~~Lf~~tg-----d~~YaD~~ERaLy 447 (872)
-.|+. +|.-. ..++.......+-.+++.+++++++. ++ +.+|.+..|+++=
T Consensus 259 ~d~~p---ywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~----~~~~~~~~~~Y~~~A~~~l~ 315 (377)
T 2ahf_A 259 EDGVV---YWDFEVPQEPSSYRDSSASAITACGLLEIASQ----LDESDPERQRFIDAAKTTVT 315 (377)
T ss_dssp TTSSC---BSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHT----SCTTCHHHHHHHHHHHHHHH
T ss_pred HhCCc---ccccCCCccCCCccCCCHHHHHHHHHHHHHHh----cCccccchHHHHHHHHHHHH
Confidence 21211 22111 11221111223334555666665544 54 6779999998873
No 10
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=98.52 E-value=5.2e-06 Score=93.41 Aligned_cols=230 Identities=12% Similarity=0.102 Sum_probs=135.9
Q ss_pred hhHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHH
Q 002872 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (872)
Q Consensus 182 ~GhyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~ 261 (872)
-|=|.-.+-++|..|+|+++++.+..+.+.|.+.-.+ . +. ...|- .+-.++..+...|+.
T Consensus 70 ~GF~~G~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~--~--~~-------------~~~HD---~GF~~~~s~~~~y~l 129 (397)
T 2zzr_A 70 NGFWTGCLWLAYEYNQDKKLKNIAHKNVLSFLNRINN--R--IA-------------LDHHD---LGFLYTPSCTAEYRI 129 (397)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT--T--CS-------------CCSST---HHHHHTTTHHHHHHH
T ss_pred cchHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhhh--c--cc-------------CCCCC---chHHHHHHHHHHHHH
Confidence 3566667789999999999999999999888764331 0 00 00010 111122234568999
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhhhhccccccccc----------cccccccchH-HHHHHHHHHcCCHHHHHHhhhc--
Q 002872 262 ADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQ----------TLNEEAGGMN-DVLYKLFCITQDPKHLMLAHLF-- 328 (872)
Q Consensus 262 tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~----------~l~~E~GGmn-eaL~~LY~~TGd~ryL~lA~~F-- 328 (872)
|||+++++++...|+++..|+.+... .-++|. ++.+- || .+|++.+++|||++|++.|..-
T Consensus 130 tg~~~~~~~~~~aA~~L~~r~~~~~g---~iqsw~~~~~~~~~~~iID~~---mni~~L~~A~~~~gd~~y~~~A~~ha~ 203 (397)
T 2zzr_A 130 NGDVKALEATIKAADKLMERYQEKGG---FIQAWGELGYKEHYRLIIDCL---LNIQLLFFAYEQTGDEKYRQVAVNHFY 203 (397)
T ss_dssp HCCHHHHHHHHHHHHHHHTTEETTTT---EECCSSSTTCGGGCEEETTHH---HHTHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHhCcCCC---EEEecccCCCCCCCceeechH---hHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999999999999999853211 112222 12222 45 6899999999999999999741
Q ss_pred -ccccccch---hh--ccCCCCCCC--c---ccCC----------cchhhHHHHHHHHhCChHHHHHHHHHHHHHhccCe
Q 002872 329 -DKPCFLGL---LA--LQADDISGF--H---SNTH----------IPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHT 387 (872)
Q Consensus 329 -~~~~~~~~---l~--~~~D~l~g~--H---anth----------iP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~ 387 (872)
.-...+.+ +. ..-|...|. | .+.. -=.+.|.+..|+.|||++|++.++..-+.+.++ .
T Consensus 204 ~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~-~ 282 (397)
T 2zzr_A 204 ASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNR-L 282 (397)
T ss_dssp HHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHT-C
T ss_pred HHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHh-h
Confidence 11111000 00 000111111 1 0111 113578899999999999999999888887753 3
Q ss_pred eeecCCCCCCCC--CCCcccccCCCCCcccccchHHHHHHHHHHhcccCC---ch--hHHHHHHHHh
Q 002872 388 YATGGTSVGEFW--SDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE---IA--YADYYERSLT 447 (872)
Q Consensus 388 Y~TGG~g~~E~f--~~p~~L~~~l~~~~~ETCas~nmlkl~~~Lf~~tgd---~~--YaD~~ERaLy 447 (872)
.-.|+. +| ..|. ++....+..+-.+++.+++++ .+++++ .+ |.+..|++|=
T Consensus 283 -~~d~~p---ywdt~~~~-~~~~~~D~Sa~aiaA~~Ll~L----~~~~~~~~~~~~~Y~~~A~~~l~ 340 (397)
T 2zzr_A 283 -PEDKVS---YWDLIFTD-GSGQPRDTSATATAVCGIHEM----LKYLPEVDPDKETYKYAMHTMLR 340 (397)
T ss_dssp -CTTSCC---BSBTTCCT-TSCCCBCHHHHHHHHHHHHHH----HTTSCTTCTTHHHHHHHHHHHHH
T ss_pred -HHhCCc---cccCCCCC-CCCCcCCCCHHHHHHHHHHHH----HHhcCccchhhHHHHHHHHHHHH
Confidence 222221 23 2221 221111223334455566554 455665 77 9999998883
No 11
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=98.45 E-value=2.1e-06 Score=96.13 Aligned_cols=227 Identities=13% Similarity=0.111 Sum_probs=136.7
Q ss_pred hhHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHH
Q 002872 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (872)
Q Consensus 182 ~GhyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~ 261 (872)
-|.|+.++..+|..|+|+++++.+..+++.+.. + +|-+. +.. .+.. +..|++.|+.
T Consensus 70 ~G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~--~---~~~~~-----------n~D----~~~~----~~~l~~lY~~ 125 (382)
T 3pmm_A 70 HGVGLYGIYQYYQQTGDIEMRDIIDRWFADRFA--E---GATTK-----------NVN----TMAP----FLTLAYRFEE 125 (382)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH--H---CCCCC-----------CTT----TTTT----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHc--C---CCCcC-----------ccc----chHH----HHHHHHHHHH
Confidence 488999999999999999999999999997653 2 12110 011 1111 2246789999
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhhhh-ccc--------cccccccccccccchH-HHHHHHHHHcCCHHHHHHhhh-cc-
Q 002872 262 ADNAEALRMTTWMVEYFYNRVQNVIK-KYS--------IERHWQTLNEEAGGMN-DVLYKLFCITQDPKHLMLAHL-FD- 329 (872)
Q Consensus 262 tG~~~aL~va~~~ad~~~~~~~~~~~-~~~--------~~~~~~~l~~E~GGmn-eaL~~LY~~TGd~ryL~lA~~-F~- 329 (872)
||+++.++++..+++++.+++.+... ++. ..+.| +..- -|+ ..|+++|++|||++|++.|.+ |.
T Consensus 126 Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~W--iDgl--~M~~p~La~~~~~tgd~~y~d~A~~q~~~ 201 (382)
T 3pmm_A 126 TGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMW--DDTL--MMTVLPLAKIGKLLNRPQYVEEATYQFLL 201 (382)
T ss_dssp HCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEE--TTHH--HHTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCCcEE--ecch--hhhHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 99999999999999999765422111 110 00111 1111 145 578999999999999998843 31
Q ss_pred -cccccchhhccCCCCCCCcccCCc------ch---------hhHHHHHHHH-------hCChHHHHHHHHHHHHHhccC
Q 002872 330 -KPCFLGLLALQADDISGFHSNTHI------PI---------VIGSQMRYEV-------TGDQLHKTISMFFMDIVNSSH 386 (872)
Q Consensus 330 -~~~~~~~l~~~~D~l~g~Hanthi------P~---------~~G~a~~Y~~-------TGD~~y~~aa~~fwd~V~~~h 386 (872)
...++++. +.+ ..|..++. +. +.|.++.|+. ++++.|++..+..-+.+.++.
T Consensus 202 ~~~~l~D~~----tGl-~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q 276 (382)
T 3pmm_A 202 HVQNLMDRE----TGL-WFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQ 276 (382)
T ss_dssp HHHHHBCTT----TSC-BCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHccCCC----CCC-eeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcC
Confidence 11122211 111 12322211 21 3667888887 556677777777777666544
Q ss_pred eeeecCCCCCCCCCCCcccccCCCCCcccccc----hHHHHHHHHHHhcccCCchhHHHHHHHHhhhhcccCCC
Q 002872 387 TYATGGTSVGEFWSDPKRLASNLDSNTEESCT----TYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRG 456 (872)
Q Consensus 387 ~Y~TGG~g~~E~f~~p~~L~~~l~~~~~ETCa----s~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~q~~ 456 (872)
- .+| .|.. +.+ .+..+.||-+ +|+|++..+.=+ + +.+|.+..||++ ++++...++
T Consensus 277 ~-~~G------~W~~---~~d-~~~~y~EsSatA~~ay~ll~~~~~g~-l--~~~Y~~~a~ka~-~~l~~~i~~ 335 (382)
T 3pmm_A 277 D-DSG------LWHT---LLD-DPHSYLEASATAGFAYGILKAVRKRY-V--GQHYAGVAEKAI-RGIVQNISP 335 (382)
T ss_dssp C-TTS------CEES---BTT-CTTSCEEHHHHHHHHHHHHHHHHTTS-S--CGGGHHHHHHHH-HHHHHTBCT
T ss_pred C-CCC------Chhh---ccC-CCCCCccccHHHHHHHHHHHHHHcCC-C--cHHHHHHHHHHH-HHHHhhCCC
Confidence 2 233 3432 111 1234555444 577887766312 1 468999999965 888877653
No 12
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=98.37 E-value=2.7e-06 Score=94.25 Aligned_cols=185 Identities=19% Similarity=0.151 Sum_probs=114.1
Q ss_pred ccccchHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHhhh-hhhccccccccccccccccchHHHHHHHHHHcCCHH
Q 002872 242 WAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQN-VIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPK 320 (872)
Q Consensus 242 W~pyy~~HkI~aGLld~y~~tG~~~aL~va~~~ad~~~~~~~~-~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~r 320 (872)
|--+.+.|.+ .+|+++|++||+++.++++.+..+++..+-.. .+..+.++. .+ +-.++.++|++|||++
T Consensus 43 ~~yWW~a~~~-~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~~~~~~~~~DD~-------a~--~~la~~~aye~t~~~~ 112 (349)
T 3k7x_A 43 FNYWWLAHLV-EVRLDAYLRTKKQADLEVAEKTYLHNKNRNGGTLIHDFYDDM-------LW--NALAAYRLYKATGKSI 112 (349)
T ss_dssp CCHHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTSSSCCSBHHHH-------HH--HHHHHHHHHHHHCCHH
T ss_pred CCccHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCccCccHH-------HH--HHHHHHHHHHHHCCch
Confidence 3334577774 88999999999999999999999988654221 111111111 11 3368999999999999
Q ss_pred HHHHhhhccc----ccccchhhccCCCCCCCccc----------CCcchhhHHHHHHHHhCChHHHHHHHHHHHHHhccC
Q 002872 321 HLMLAHLFDK----PCFLGLLALQADDISGFHSN----------THIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSH 386 (872)
Q Consensus 321 yL~lA~~F~~----~~~~~~l~~~~D~l~g~Han----------thiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h 386 (872)
||++|+...+ ..+.++.. .|+..+ +..+.+...+++|++|||+.|++.|+.-|+.+.+ +
T Consensus 113 yL~~A~~l~~~l~~~~wd~~~g------GGi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~-~ 185 (349)
T 3k7x_A 113 YLEDAQLVWQDLVDTGWNDIMG------GGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTK-V 185 (349)
T ss_dssp HHHHHHHHHHHHHHHTBCSGGG------SCBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHhCCCCCCC------CceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-c
Confidence 9999975421 11111111 122111 1222345578889999999999999999999875 4
Q ss_pred eee-ecCCCCCCCCCCCcccccCC-CCCcccccchHH---HHHHHHHHhcccCCchhHHHHHHHHhhhhcc
Q 002872 387 TYA-TGGTSVGEFWSDPKRLASNL-DSNTEESCTTYN---MLKVSRHLFRWTKEIAYADYYERSLTNGVLG 452 (872)
Q Consensus 387 ~Y~-TGG~g~~E~f~~p~~L~~~l-~~~~~ETCas~n---mlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa 452 (872)
++- .|.+-.+ +.... .....+..=+|| +|.-+-.|++.|+|.+|.+..++.+ |.++.
T Consensus 186 l~d~~g~v~Dg--------~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~-~~~~~ 247 (349)
T 3k7x_A 186 LVREDGFVEDG--------INRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTA-AISLK 247 (349)
T ss_dssp HBCTTSCBCCE--------ECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHH
T ss_pred CCCCCCeEecC--------CccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH-HHHHH
Confidence 332 1221111 11000 000112233444 5555678999999999999998876 44443
No 13
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=98.34 E-value=1.6e-05 Score=89.26 Aligned_cols=250 Identities=10% Similarity=0.098 Sum_probs=149.2
Q ss_pred hhHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcC-CcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHH
Q 002872 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIG-SGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYT 260 (872)
Q Consensus 182 ~GhyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~-dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~ 260 (872)
-|..|.+.|.+|..++++++.+.++..++.|.+.-.... .||...+.+. +... .=...|..-.++.|+++ |.
T Consensus 54 n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG-----~~~~-~~~~lyd~Af~i~al~~-~~ 126 (402)
T 3gt5_A 54 STRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDD-----RVED-DTNHCYGLAFVMLAYSC-GL 126 (402)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETT-----EEEE-CCEEHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCC-----CCCc-CCcchHHHHHHHHHHHH-HH
Confidence 688899999999999999999999999999987422112 4665444110 0000 00123444445667877 77
Q ss_pred HcCChhHHHHHHHHHHHHHHHhhhhhhc-cc--ccccccccccccc-----chHHHHHHHHHHcCCHHHHHHhhhccc--
Q 002872 261 YADNAEALRMTTWMVEYFYNRVQNVIKK-YS--IERHWQTLNEEAG-----GMNDVLYKLFCITQDPKHLMLAHLFDK-- 330 (872)
Q Consensus 261 ~tG~~~aL~va~~~ad~~~~~~~~~~~~-~~--~~~~~~~l~~E~G-----GmneaL~~LY~~TGd~ryL~lA~~F~~-- 330 (872)
.||++++|+.|.++.+++.+++.+...+ +. ...-|. +....+ =+.+++.+||++|||++|++.|+...+
T Consensus 127 ~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~-~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~~ 205 (402)
T 3gt5_A 127 KVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWN-FTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRI 205 (402)
T ss_dssp HTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCC-BCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCC-CCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 7999999999999999998876421111 11 011111 111011 023689999999999999999876532
Q ss_pred -ccccchhh------ccCCCCCCCcccCCcc--------hhhHH--------HHHHHHhCChHHHHHHHHHHHHHhccCe
Q 002872 331 -PCFLGLLA------LQADDISGFHSNTHIP--------IVIGS--------QMRYEVTGDQLHKTISMFFMDIVNSSHT 387 (872)
Q Consensus 331 -~~~~~~l~------~~~D~l~g~HanthiP--------~~~G~--------a~~Y~~TGD~~y~~aa~~fwd~V~~~h~ 387 (872)
..|.++.. ...|--.....|..-| +--|| ...++++||+.|++.++..++.+.+ +.
T Consensus 206 ~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~~~~-~g 284 (402)
T 3gt5_A 206 TRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVA-RS 284 (402)
T ss_dssp HTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHH-HH
T ss_pred HHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH-hc
Confidence 11222110 0000000000011111 22465 3447889999999999888887653 33
Q ss_pred ee--ecCCCCCCCCCCCcccccCCCCCcccccchHHHHHHHHHHhcccCCchhHHHHHHHH
Q 002872 388 YA--TGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL 446 (872)
Q Consensus 388 Y~--TGG~g~~E~f~~p~~L~~~l~~~~~ETCas~nmlkl~~~Lf~~tgd~~YaD~~ERaL 446 (872)
+- .||+-.. ..++ +.........+...+.|.-.-.|++.|||.+|.+.++++.
T Consensus 285 wd~~~Gg~~~~---~d~~---g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~ 339 (402)
T 3gt5_A 285 WDAVRGGLCYG---FAPD---GTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLW 339 (402)
T ss_dssp BCTTTCSBCSE---ECTT---SCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred ccCCCCcEEEE---EcCC---CCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 32 3554210 0111 1111334566677778888889999999999999998875
No 14
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=98.16 E-value=4.3e-05 Score=86.30 Aligned_cols=272 Identities=9% Similarity=0.046 Sum_probs=154.3
Q ss_pred hhhHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhh-cCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHH
Q 002872 181 FVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKE-IGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQY 259 (872)
Q Consensus 181 ~~GhyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~-~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y 259 (872)
.-|-.|.+.|.+|. +++++..+.++..++.|.+.-.. .+.|+...... .++.... ...|..=-++.++++ |
T Consensus 52 ~nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~----dg~~~~~--k~lyd~Af~i~al~~-~ 123 (421)
T 2zbl_A 52 ITARMLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVND----QGVVDAS--KQGYQHFFALLGAAS-A 123 (421)
T ss_dssp HHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEET----TEEEECC--EEHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCC----CCCcCCc--hhHHHHHHHHHHHHH-H
Confidence 35777888888887 99999999999999999876321 12467643311 1111110 233444446667877 9
Q ss_pred HHcCChhHHHHHHHHHHHHHHHhhhhhhc-c--cccccccccc--ccccc---hHHHHHHHHHHcCCHHHHHHhhhccc-
Q 002872 260 TYADNAEALRMTTWMVEYFYNRVQNVIKK-Y--SIERHWQTLN--EEAGG---MNDVLYKLFCITQDPKHLMLAHLFDK- 330 (872)
Q Consensus 260 ~~tG~~~aL~va~~~ad~~~~~~~~~~~~-~--~~~~~~~~l~--~E~GG---mneaL~~LY~~TGd~ryL~lA~~F~~- 330 (872)
++||++++++++....+++.+.+.....+ + ....-+..+. ....+ +.++|.+||++|||++|++.|+...+
T Consensus 124 ~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~ 203 (421)
T 2zbl_A 124 VTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASV 203 (421)
T ss_dssp HTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHH
T ss_pred HHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 99999999999999999998876432111 1 0001111000 00111 24799999999999999987765421
Q ss_pred --ccccch----hh--ccC--CCCCCC----cccCCcc--hhhH--------HHHHHHHh---CC--h-HHHHHHHHHHH
Q 002872 331 --PCFLGL----LA--LQA--DDISGF----HSNTHIP--IVIG--------SQMRYEVT---GD--Q-LHKTISMFFMD 380 (872)
Q Consensus 331 --~~~~~~----l~--~~~--D~l~g~----HanthiP--~~~G--------~a~~Y~~T---GD--~-~y~~aa~~fwd 380 (872)
..+..+ +. ... ..+.+. -.+...| +--| ....|+++ || + .|++.+...++
T Consensus 204 ~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~ 283 (421)
T 2zbl_A 204 IIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFH 283 (421)
T ss_dssp HCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHH
T ss_pred HHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHH
Confidence 111110 00 000 001110 0111111 0123 45668888 67 5 89999998888
Q ss_pred HHhccCeee-e--cCCCCCCCCCCCcccccCCCCCcccccchHHHHHHHHHHhcccCCchhHHHHHHHHhhhhcccC-CC
Q 002872 381 IVNSSHTYA-T--GGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQ-RG 456 (872)
Q Consensus 381 ~V~~~h~Y~-T--GG~g~~E~f~~p~~L~~~l~~~~~ETCas~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~q-~~ 456 (872)
.+.+ +.+- . ||.=-. ..+ .+.+.....+.+..-+++.-.-.|+++|||.+|.+.+++.+ +.+.... ++
T Consensus 284 ~~~~-~g~d~~~~GG~~~~---~~~---~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~-~~~~~~~~d~ 355 (421)
T 2zbl_A 284 ATIR-DAWAPDGADGFVYS---VDW---DGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWW-DYCIKYLMDY 355 (421)
T ss_dssp HHHH-HHBSCSSSSSBCSC---BCT---TSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHTBCT
T ss_pred HHHH-HhcCCCCCCcEEEe---ecC---CCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCCCC
Confidence 8764 4442 2 443211 111 01112334455666667777788999999999999999864 4444332 22
Q ss_pred CCCCcEEEeccC
Q 002872 457 TEPGVMIYLLPL 468 (872)
Q Consensus 457 ~d~g~~~Y~~PL 468 (872)
..++-+.+.++-
T Consensus 356 ~~G~w~~~l~~~ 367 (421)
T 2zbl_A 356 ENGSWWQELDAD 367 (421)
T ss_dssp TTSSBCSEECTT
T ss_pred CCCeeEeeECcC
Confidence 233344554443
No 15
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.12 E-value=1.8e-05 Score=87.65 Aligned_cols=192 Identities=9% Similarity=-0.071 Sum_probs=111.1
Q ss_pred hhHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHH
Q 002872 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (872)
Q Consensus 182 ~GhyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~ 261 (872)
-+-++.|++.+|..|+|++..+.+.++.+.|.+.... ++|++...... .+..+ .+--.+|.+ .++++.|++
T Consensus 117 ~af~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d-~~g~~~~~~~~----~~~~~---~~~~~~~~~-~all~l~~~ 187 (388)
T 2gz6_A 117 DCFAAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDN-PKGKYTKTYPG----TRPMK---ALAVPMILA-NLTLEMEWL 187 (388)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC-------------------CCCCE---ETHHHHHHH-HHHHHTGGG
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcC-CCcccCcccCC----CCCCC---CCCHHHHHH-HHHHHHHHH
Confidence 3557889999999999999999999999999877641 45775432111 11111 122234544 457789999
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhhhhc----ccccccccccc------ccccch---HHHHHHHHHHcCCHHHHHHhhhc
Q 002872 262 ADNAEALRMTTWMVEYFYNRVQNVIKK----YSIERHWQTLN------EEAGGM---NDVLYKLFCITQDPKHLMLAHLF 328 (872)
Q Consensus 262 tG~~~aL~va~~~ad~~~~~~~~~~~~----~~~~~~~~~l~------~E~GGm---neaL~~LY~~TGd~ryL~lA~~F 328 (872)
||+++.++.+.++++.+.+++.+...+ .-... |..+. .+.|+. ...|.+++++|||++|++.|+..
T Consensus 188 t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~-w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~ 266 (388)
T 2gz6_A 188 LPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPD-GSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDV 266 (388)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTT-SCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCC-CCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999999999999998776421111 10111 21111 111211 13688999999999999999765
Q ss_pred cccc---ccchh--------hccCCCCCCC-cccC----CcchhhHHHHHHHHhCChHHHHHHHHHHHHHh
Q 002872 329 DKPC---FLGLL--------ALQADDISGF-HSNT----HIPIVIGSQMRYEVTGDQLHKTISMFFMDIVN 383 (872)
Q Consensus 329 ~~~~---~~~~l--------~~~~D~l~g~-Hant----hiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~ 383 (872)
.+.. ..++. ......+.+. +.+. |..-+.|.+..|++|||+.|++.++..|+.+.
T Consensus 267 ~~~~~~~g~d~~~Gg~~~~~~~~g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~ 337 (388)
T 2gz6_A 267 VLNILNFAWDNEYGGLYYFMDAAGHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSW 337 (388)
T ss_dssp HHHHHHHHBCTTTCSBCSCEETTSCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3211 01110 0000000000 0000 12235778899999999999998888887664
No 16
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=98.09 E-value=2.6e-05 Score=86.82 Aligned_cols=228 Identities=15% Similarity=0.178 Sum_probs=140.8
Q ss_pred hhHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHH
Q 002872 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (872)
Q Consensus 182 ~GhyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~ 261 (872)
-|-++.|++.+|..|+|+++++.+...++.+. . .+|.+. +.... + -.|. +..++++.|+.
T Consensus 43 ~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~---~--~~g~l~-~~~~~---l--------Dd~~---~g~~ll~lY~~ 102 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATGEKRYFEYAKAYADLLI---D--DNGNLL-FRRDE---L--------DAIQ---AGLILFPLYEQ 102 (373)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHB---C--TTCCBC-CCTTC---G--------GGTG---GGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh---C--CCCccc-CCCCC---c--------chHH---HHHHHHHHHHH
Confidence 48899999999999999999999999999874 3 466655 42211 1 1111 22467899999
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhhhhcccccccccc-cccc---ccc--hH-HHHHHHHHHcCCHHHHHHhhhccc---c
Q 002872 262 ADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQT-LNEE---AGG--MN-DVLYKLFCITQDPKHLMLAHLFDK---P 331 (872)
Q Consensus 262 tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~~-l~~E---~GG--mn-eaL~~LY~~TGd~ryL~lA~~F~~---~ 331 (872)
||+++.++++..+++++..++... ....|.. ...+ .-| |+ ..|+++|++|||++|++.|.+-.. .
T Consensus 103 Tgd~~yl~~a~~la~~l~~~~r~~-----~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~ 177 (373)
T 1nc5_A 103 TKDERYVKAAKRLRSLYGTLNRTS-----EGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRK 177 (373)
T ss_dssp HCCHHHHHHHHHHHGGGGTSCBCT-----TSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHhccCCC-----CCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 999999999999999996543211 1112210 0000 002 33 578999999999999999865211 1
Q ss_pred cccchhhccCCCCCCCcccC------------C-cc---------hhhHHHHHHHH-----hCChHHHHHHHHHHHHHhc
Q 002872 332 CFLGLLALQADDISGFHSNT------------H-IP---------IVIGSQMRYEV-----TGDQLHKTISMFFMDIVNS 384 (872)
Q Consensus 332 ~~~~~l~~~~D~l~g~Hant------------h-iP---------~~~G~a~~Y~~-----TGD~~y~~aa~~fwd~V~~ 384 (872)
.+.++ .+.+ ..|..+ . -| .+.|.++.|+. ++++.|++.++..-+.+.+
T Consensus 178 ~l~D~----~tGl-~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~ 252 (373)
T 1nc5_A 178 HTKDA----KTGL-FYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICR 252 (373)
T ss_dssp HHBCT----TTSC-BCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCC----CCCC-EEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHH
Confidence 11221 1111 012111 1 12 13556777887 6888899999988888876
Q ss_pred cCeee-ecCCCCCCCCCCCcccc-cCCCCCccc----ccchHHHHHHHHHHhcccCCchhHHHHHHHHhhhhcc
Q 002872 385 SHTYA-TGGTSVGEFWSDPKRLA-SNLDSNTEE----SCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLG 452 (872)
Q Consensus 385 ~h~Y~-TGG~g~~E~f~~p~~L~-~~l~~~~~E----TCas~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa 452 (872)
+.. . +| .|.. .+. ...+..+-| .+.+|.|++..+.-+. |.+|.+..||++ ++++.
T Consensus 253 ~q~-~~dG------~W~~--~ld~~~~~~~~~EsSatA~~ay~l~~g~~~g~l---~~~Y~~~a~k~~-~~l~~ 313 (373)
T 1nc5_A 253 YQD-KETG------LWYQ--IVDKGDRSDNWLESSGSCLYMYAIAKGINKGYL---DRAYETTLLKAY-QGLIQ 313 (373)
T ss_dssp TSC-TTTS------CCBS--BTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTSS---CGGGHHHHHHHH-HHHHH
T ss_pred hcC-CCCC------ceee--ecCCCCCCCCCccccHHHHHHHHHHHHHHCCCC---cHHHHHHHHHHH-HHHHH
Confidence 542 2 33 2321 010 111234556 4555788887755332 468999999988 77765
No 17
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.07 E-value=2.6e-05 Score=88.91 Aligned_cols=301 Identities=11% Similarity=0.069 Sum_probs=170.2
Q ss_pred ecccCCCeEecCCCchHHHHHHHHhhhhccccchhhHhHHHhcCCCCCCCCCCCCCC------CCcCcccchhhHHHHHH
Q 002872 116 KEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEE------PSCELRGHFVGHYLSAS 189 (872)
Q Consensus 116 ~p~pl~~VrL~~~~~~~~~~~~~~~yLl~ld~drlL~nFR~~AGl~~~g~~ygGWE~------~~~~l~Gh~~GhyLsA~ 189 (872)
-++|.+.++-. ...+..++..+||....+-+++.. ..|-.. ..|..|.. .+..+.---.|..|+|+
T Consensus 20 ~~~~~~~~~~~---~i~~~~d~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~y~~Gv~l~gl 91 (445)
T 3k11_A 20 YQGTYGDLTPE---QVKKDIDRVFAYIDKETPARVVDK---NTGKVI--TDYTAMGDEAQLERGAFRLASYEWGVTYSAL 91 (445)
T ss_dssp CSSCCSCCCHH---HHHHHHHHHHHHHHHTSCCCEEET---TTCCEE--CCTTTCCTTEEECCCSSCTTSHHHHHHHHHH
T ss_pred CCCCCCcCCHH---HHHHHHHHHHHHHhccCcceeecC---CCCcee--ccccccccccccccCCcccCccCHHHHHHHH
Confidence 45788877642 446677888888887666555521 111100 01112322 11111112358999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHh-----hcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHHcCC
Q 002872 190 ALMWASTHNESLKEKMSAVVSALSACQK-----EIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADN 264 (872)
Q Consensus 190 A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~-----~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~tG~ 264 (872)
+.+|..|+|+++.+.+++.++.|.+.-. -..+|.+..- ..+... ..... - | +. +..+|+..|+.|++
T Consensus 92 ~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~---~r~~~~-~~~LD-D-~-g~-~~~~Li~lY~~T~d 163 (445)
T 3k11_A 92 IAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQ---LLQILT-PHALD-D-A-GA-VCTAMIKLRLKDES 163 (445)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHH---HHHHHS-CCSGG-G-T-HH-HHHHHHHHHHHCTT
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecc---cccccC-CCcch-h-H-HH-HHHHHHHHHHhcCC
Confidence 9999999999999999999998775311 0034554320 000000 00000 0 1 22 45678899999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhc-c---c--cccccccccccccchH-HHHHHHHHHcCCHH--HHHHhhh-cc--ccc
Q 002872 265 AEALRMTTWMVEYFYNRVQNVIKK-Y---S--IERHWQTLNEEAGGMN-DVLYKLFCITQDPK--HLMLAHL-FD--KPC 332 (872)
Q Consensus 265 ~~aL~va~~~ad~~~~~~~~~~~~-~---~--~~~~~~~l~~E~GGmn-eaL~~LY~~TGd~r--yL~lA~~-F~--~~~ 332 (872)
++.++++...+||+.+++.+...+ + . ..++| +.+- -|+ ..|++++.+|||++ |++.|.+ |. ...
T Consensus 164 ~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~~~~~~q~W--iD~l--yM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~~ 239 (445)
T 3k11_A 164 LPVDGLIQNYFDFIINKEYRLADGTFARNRPQRNTLW--LDDM--FMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFADR 239 (445)
T ss_dssp CCCHHHHHHHHHHHHHTSCBCTTCCBCBCSSSTTEEE--THHH--HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCceeecCCCCCceE--ecch--hhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHHHh
Confidence 999999999999999876432111 0 0 01111 1111 145 57889999999999 9988864 31 112
Q ss_pred ccchhhccCCCCCCCcccC----Cc-ch---------hhHHHHHHHH-----hCChHHHHHHHHHHHHHhccCeeeecCC
Q 002872 333 FLGLLALQADDISGFHSNT----HI-PI---------VIGSQMRYEV-----TGDQLHKTISMFFMDIVNSSHTYATGGT 393 (872)
Q Consensus 333 ~~~~l~~~~D~l~g~Hant----hi-P~---------~~G~a~~Y~~-----TGD~~y~~aa~~fwd~V~~~h~Y~TGG~ 393 (872)
++++. ..| ..|..+ +. +. +.|.++.++. ++.+.+++..+..-+.+.++.- .+|
T Consensus 240 l~D~~----tGL-~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~-~~G-- 311 (445)
T 3k11_A 240 MFIPE----KGL-YRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQS-GEG-- 311 (445)
T ss_dssp HEETT----TTE-ECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCC-TTS--
T ss_pred cccCC----CCC-EeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCC-CCC--
Confidence 22221 011 112211 11 21 3567778886 5666777777777777765542 222
Q ss_pred CCCCCCCCCcccccCCCCCcccccc----hHHHHHHHHHHhcccCCchhHHHHHHHHhhhhcccCC
Q 002872 394 SVGEFWSDPKRLASNLDSNTEESCT----TYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQR 455 (872)
Q Consensus 394 g~~E~f~~p~~L~~~l~~~~~ETCa----s~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~q~ 455 (872)
.|.. +.+ .+..+-||-+ +|+|++..+.-+ -....|.+..||++ ++++...+
T Consensus 312 ----~W~~---vld-~~~~y~EsSaTAmfaygllkgvr~G~--Ld~~~Y~~~A~ka~-~~L~~~i~ 366 (445)
T 3k11_A 312 ----FWHQ---LLD-CNDSYLETSATAIYVYCLAHAINKGW--IDAIAYGPVAQLGW-HAVAGKIN 366 (445)
T ss_dssp ----CEES---BTT-CTTSCEEHHHHHHHHHHHHHHHHHTS--SCHHHHHHHHHHHH-HHHHTTBC
T ss_pred ----chhh---ccC-CCCCCCCccHHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHH-HHHHHhCC
Confidence 3432 111 1345556444 477888766533 12346999999876 77776554
No 18
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.94 E-value=8.1e-05 Score=83.56 Aligned_cols=193 Identities=10% Similarity=-0.002 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH-hhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHHc
Q 002872 184 HYLSASALMWASTHNESLKEKMSAVVSALSACQ-KEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYA 262 (872)
Q Consensus 184 hyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q-~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~t 262 (872)
-.+-|++. |..|+|++..+++.++.+.|.+.- +..+.||..++... ++ ....=.+.-.+|.+++ ++..|++|
T Consensus 117 f~i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~----~~-~~~~~~~n~~m~l~ea-ll~L~~~t 189 (402)
T 3gt5_A 117 FVMLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQ----WN-FTRYRGQNANMHMCEA-MLAAYEAS 189 (402)
T ss_dssp HHHHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT----CC-BCSCEEHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCC----CC-CCCCCCCCHHHHHHHH-HHHHHHhh
Confidence 34566666 666999999999999999998763 21134565443321 11 1110012224565554 66899999
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhcc---ccccccccc---------------cccccchHH---HHHHHHHHcCCHHH
Q 002872 263 DNAEALRMTTWMVEYFYNRVQNVIKKY---SIERHWQTL---------------NEEAGGMND---VLYKLFCITQDPKH 321 (872)
Q Consensus 263 G~~~aL~va~~~ad~~~~~~~~~~~~~---~~~~~~~~l---------------~~E~GGmne---aL~~LY~~TGd~ry 321 (872)
|+++.++.+.++++.+.+++-+.-.+. ....-|... ..+.|-+-| -|.+++++||+++|
T Consensus 190 gd~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~ 269 (402)
T 3gt5_A 190 GEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWL 269 (402)
T ss_dssp CCHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTH
T ss_pred CCHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHH
Confidence 999999999999999987653211110 000112111 012232223 47889999999999
Q ss_pred HHHhhhccccc---ccchhhc----cCCCCCCCccc------CCcchhhHHHHHHHHhCChHHHHHHHHHHHHHhc
Q 002872 322 LMLAHLFDKPC---FLGLLAL----QADDISGFHSN------THIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNS 384 (872)
Q Consensus 322 L~lA~~F~~~~---~~~~l~~----~~D~l~g~Han------thiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~ 384 (872)
++.|+.+.+.. ..++... ..|. .+.-.. .|..-++|.+.+|++|||+.|++.++..|+.+.+
T Consensus 270 ~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~-~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~~ 344 (402)
T 3gt5_A 270 VPVARSLFDVAVARSWDAVRGGLCYGFAP-DGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYAWQ 344 (402)
T ss_dssp HHHHHHHHHHHHHHHBCTTTCSBCSEECT-TSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCCcEEEEEcC-CCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 99998763211 1111100 0000 000000 1111246788999999999999999999888753
No 19
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.85 E-value=0.00018 Score=80.19 Aligned_cols=271 Identities=8% Similarity=-0.065 Sum_probs=148.3
Q ss_pred hhHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHH-hhcCC-cceecCCchhhhhhhhcCCCccccchHHHHHHHHH
Q 002872 182 VGHYLSASALMWAST---HNESLKEKMSAVVSALSACQ-KEIGS-GYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLL 256 (872)
Q Consensus 182 ~GhyLsA~A~~~a~t---~D~~L~~k~d~~Vd~L~~~Q-~~~~d-GYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLl 256 (872)
-+..|.+.|.+|..+ +++++.+.++..++.|.+.- +..+. |+....... ++... .-...|..=-+..+++
T Consensus 58 nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~d----g~~~~-~~~~lyd~af~~~a~~ 132 (402)
T 1fp3_A 58 QGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRD----GRPVK-VQRSIFSECFYTMAMN 132 (402)
T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTSCCBCSEECTT----SCEEE-CCSSSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccCcCCCCceEEEECCC----CCccc-cccchHHHHHHHHHHH
Confidence 455577888888876 99999999999999999873 31122 666443211 00000 0011222223556788
Q ss_pred HHHHHcCChhHHHHHHHHHHHHHHHhh-hhhhcccccc--ccccccccccc-hH--HHHHH---HHHHcCCHHHHHHhhh
Q 002872 257 DQYTYADNAEALRMTTWMVEYFYNRVQ-NVIKKYSIER--HWQTLNEEAGG-MN--DVLYK---LFCITQDPKHLMLAHL 327 (872)
Q Consensus 257 d~y~~tG~~~aL~va~~~ad~~~~~~~-~~~~~~~~~~--~~~~l~~E~GG-mn--eaL~~---LY~~TGd~ryL~lA~~ 327 (872)
++|++||+++.+++|..+.+++.+.+. .. .++-... -+.... ..++ |. +++.. ||.+|+++ |++.|+.
T Consensus 133 ~~~~atgd~~~~~~A~~l~~~~~~~~~d~~-~G~f~~~~~~~~~~~-~~~~~m~~~~~~l~l~~l~~~~~~~-~~~~a~~ 209 (402)
T 1fp3_A 133 ELWRVTAEARYQSEAVDMMDQIVHWVREDP-SGLGRPQLPGAVASE-SMAVPMMLLCLVEQLGEEDEELAGR-YAQLGHW 209 (402)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHTCG-GGGCCCCCTTSCCEE-ETHHHHHHHHHHHHHHTTCHHHHHH-THHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhccCC-CcccCccccCccCCC-CcchHHHHHHHHHHHHHHHHhcCcH-HHHHHHH
Confidence 999999999999999999999987764 21 1111000 011000 0011 11 45666 77888655 8877665
Q ss_pred ccc---ccccchhhc----cCCCCCCCc-ccCC-cchhhH--------HHHHHHHhCChHHHHHHHHHHHHH-hccCeee
Q 002872 328 FDK---PCFLGLLAL----QADDISGFH-SNTH-IPIVIG--------SQMRYEVTGDQLHKTISMFFMDIV-NSSHTYA 389 (872)
Q Consensus 328 F~~---~~~~~~l~~----~~D~l~g~H-anth-iP~~~G--------~a~~Y~~TGD~~y~~aa~~fwd~V-~~~h~Y~ 389 (872)
..+ .. +.+... .-|. .+.. .+.. -++--| .+..++++||+.|+++++...+.+ .+ +++-
T Consensus 210 ~~~~~~~~-~~~~~~~~~e~~d~-dw~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~-~~~d 286 (402)
T 1fp3_A 210 CARRILQH-VQRDGQAVLENVSE-DGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFR-SGWD 286 (402)
T ss_dssp HHHHHHTT-EETTTTEECSEEET-TSCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHH-HHBC
T ss_pred HHHHHHHH-hCcCCCeEEEEECC-CCCccCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH-Hhcc
Confidence 311 11 121100 0000 0000 0000 012233 344588999999999999888887 54 3332
Q ss_pred -e-cCCCCCCCC-CCCcccccCCCCCcccccchHHHHHHHHHHhcccCCchhHHHHHHHHhhhhcccC-CCCCCCcEEEe
Q 002872 390 -T-GGTSVGEFW-SDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQ-RGTEPGVMIYL 465 (872)
Q Consensus 390 -T-GG~g~~E~f-~~p~~L~~~l~~~~~ETCas~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~q-~~~d~g~~~Y~ 465 (872)
- ||.-..-.+ +.+ ...+.......+...+++.-.-.|++.|||.+|.+.+++.. +-+.... ++..++-|.+.
T Consensus 287 ~~~gg~~~~~~~~g~~---~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~-~~~~~~f~D~~~G~w~~~~ 362 (402)
T 1fp3_A 287 ADHGGLFYFQDADGLC---PTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVA-EYTFRQFRDPEYGEWFGYL 362 (402)
T ss_dssp TTTCSBCSCEETTSCC---CSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHTBCTTTSSBCCEE
T ss_pred CCCCCEEEeecCCCCc---cccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCcCCCCCceEeeE
Confidence 2 443211011 111 11122233444666677888888999999999999888853 5554443 33234444554
Q ss_pred cc
Q 002872 466 LP 467 (872)
Q Consensus 466 ~P 467 (872)
++
T Consensus 363 ~~ 364 (402)
T 1fp3_A 363 NR 364 (402)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 20
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.80 E-value=0.00038 Score=77.81 Aligned_cols=242 Identities=12% Similarity=0.019 Sum_probs=136.9
Q ss_pred chhhHH-HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCcc-ccchHHH-HHHHHH
Q 002872 180 HFVGHY-LSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWA-PYYTIHK-ILAGLL 256 (872)
Q Consensus 180 h~~Ghy-LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~-pyy~~Hk-I~aGLl 256 (872)
|=.|=. ...++..|..|+|++.++.+....+.|...=. ...|++-.+... . ...|. +...-.+ .+.+|.
T Consensus 87 HD~Gf~~~~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~-~~~g~i~sw~~~-----~--~~~~~~~~iID~mmni~~L~ 158 (377)
T 2ahf_A 87 HNIGFLYSLSAKAQWIVEKDESARKLALDAADVLMRRWR-ADAGIIQAWGPK-----G--DPENGGRIIIDCLLNLPLLL 158 (377)
T ss_dssp STHHHHHHTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEE-TTTTEECCBSST-----T--CTTTTTEEEGGGGGGHHHHH
T ss_pred CCchHhhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC-CCCCeEEeccCC-----C--CCCCCceEEechHHHHHHHH
Confidence 434542 23577789999999999999999998875422 134777665320 0 11121 1110001 134677
Q ss_pred HHHHHcCChhHHHHHHHHHHHHHHHhhhh----hh--------ccccc--ccccccccc---c--cchHHHHHHHHHHcC
Q 002872 257 DQYTYADNAEALRMTTWMVEYFYNRVQNV----IK--------KYSIE--RHWQTLNEE---A--GGMNDVLYKLFCITQ 317 (872)
Q Consensus 257 d~y~~tG~~~aL~va~~~ad~~~~~~~~~----~~--------~~~~~--~~~~~l~~E---~--GGmneaL~~LY~~TG 317 (872)
.+++.+|+++.+++|.+.++.+.+.+-+. .. +.... .++...+.. + .-+..++..||+.|+
T Consensus 159 ~A~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~ 238 (377)
T 2ahf_A 159 WAGEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLG 238 (377)
T ss_dssp HHHHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHC
Confidence 78999999999999999999998765211 00 00000 001001110 0 123478999999999
Q ss_pred CHHHHHHhhhcccccccchhhccCCCCCCCc-------ccCCcch-----hhHHHHHHHHhC-----ChHHHHHHHHHHH
Q 002872 318 DPKHLMLAHLFDKPCFLGLLALQADDISGFH-------SNTHIPI-----VIGSQMRYEVTG-----DQLHKTISMFFMD 380 (872)
Q Consensus 318 d~ryL~lA~~F~~~~~~~~l~~~~D~l~g~H-------anthiP~-----~~G~a~~Y~~TG-----D~~y~~aa~~fwd 380 (872)
|++||+.|+.+.+- ++..+ ..|..+-.+ .....|- +.|..+++++++ ++.|+++++...+
T Consensus 239 d~~yL~~A~~la~~-~l~~~--~~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~ 315 (377)
T 2ahf_A 239 NADLLETAKRMARH-FLARV--PEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVT 315 (377)
T ss_dssp CHHHHHHHHHHHHH-HHTTC--CTTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH-HHHhh--HHhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHH
Confidence 99999999865321 11111 011110001 0111221 256677889996 6789999999988
Q ss_pred HHhccCeeeecCCCCCCCCCCCcccccCCCCCcccccchHHHHHHHHHHhcccCC
Q 002872 381 IVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE 435 (872)
Q Consensus 381 ~V~~~h~Y~TGG~g~~E~f~~p~~L~~~l~~~~~ETCas~nmlkl~~~Lf~~tgd 435 (872)
.+.+...-..|..+.+.--+.-+..+. .....+|..|+--++.+-|.++.++
T Consensus 316 ~l~~~y~~~~~~~~~g~L~h~~~~~~~---~~~~d~~~~ygDy~~~Eal~r~~~~ 367 (377)
T 2ahf_A 316 ALRDGYAERDDGEAEGFIRRGSYHVRG---GISPDDYTIWGDYYYLEALLRLERG 367 (377)
T ss_dssp HHHHHTBCCCCSSCCCSBSCBCSBTTT---TBSSSBCBHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCCCCCCeEEecccccCCC---CCCCCcCccHHHHHHHHHHHHHHcC
Confidence 886532222232333333222222221 2246678888888888888777654
No 21
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.71 E-value=0.00022 Score=79.39 Aligned_cols=171 Identities=12% Similarity=0.014 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHHcCCHHHHHHhhhcccccccchhhccCCCCC-
Q 002872 267 ALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDIS- 345 (872)
Q Consensus 267 aL~va~~~ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~~~~~~~l~~~~D~l~- 345 (872)
....+.+|+|++.++..+.... ....|. =+.|-|-.+|.++|+.|||++|++.|+...+.- +.. .+ .+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~-~~~~W~----w~~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~-~~~--~g--~l~~ 82 (373)
T 1nc5_A 13 PLTYAEALANTIMNTYTVEELP-PANRWH----YHQGVFLCGVLRLWEATGEKRYFEYAKAYADLL-IDD--NG--NLLF 82 (373)
T ss_dssp HHHHHHHHHHHHHHHCCTTTSS-STTCCC----HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-BCT--TC--CBCC
T ss_pred hHHHHHHHHHHHHHhCCCcccC-CCCCcc----hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-hCC--CC--cccC
Confidence 4578899999998775432110 011220 134556679999999999999999998764321 111 00 110
Q ss_pred -CCcccCCcchhhHHHHHHHHhCChHHHHHHHHHHHHHhccCeeeecCCCCCCCCCCCcccccCCCCCcccccch-HHHH
Q 002872 346 -GFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTT-YNML 423 (872)
Q Consensus 346 -g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~Y~TGG~g~~E~f~~p~~L~~~l~~~~~ETCas-~nml 423 (872)
.-+.. +.....+...+|++|||++|++++...++.+.. + +-++. +-+|..+. .....-|-. +=.+
T Consensus 83 ~~~~lD-d~~~g~~ll~lY~~Tgd~~yl~~a~~la~~l~~-~-~r~~~---G~fw~~~~-------~~~~~w~D~l~m~~ 149 (373)
T 1nc5_A 83 RRDELD-AIQAGLILFPLYEQTKDERYVKAAKRLRSLYGT-L-NRTSE---GGFWHKDG-------YPYQMWLDGLYMGG 149 (373)
T ss_dssp CTTCGG-GTGGGGGHHHHHHHHCCHHHHHHHHHHHGGGGT-S-CBCTT---SCBCSCTT-------STTEEETHHHHHHH
T ss_pred CCCCcc-hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-c-cCCCC---CCeeccCC-------CCCeEEeCcHHHHH
Confidence 00111 223456788899999999999999999999853 2 22321 12243211 111222222 2123
Q ss_pred HHHHHHhcccCCchhHHHHHHHHhhhhcccCCCCCCCc
Q 002872 424 KVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGV 461 (872)
Q Consensus 424 kl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~q~~~d~g~ 461 (872)
-+.-++.++|||.+|.|..++.+-...--..++ +.|.
T Consensus 150 p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~-~tGl 186 (373)
T 1nc5_A 150 PFALKYANLKQETELFDQVVLQESLMRKHTKDA-KTGL 186 (373)
T ss_dssp HHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCT-TTSC
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCC-CCCC
Confidence 455778999999999999999775544333444 4453
No 22
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.67 E-value=0.00053 Score=77.14 Aligned_cols=235 Identities=11% Similarity=0.003 Sum_probs=134.8
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHHcCChhH
Q 002872 188 ASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEA 267 (872)
Q Consensus 188 A~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~tG~~~a 267 (872)
.++..|..|+|++.++.+....+.|...=. ...|++-+....- +.. ...+|-- +.+ -+.+|..+++.+|+++.
T Consensus 122 s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~-~~~g~iqsw~~~~-~~~--~~~~iID-~~m--ni~~L~~A~~~~gd~~y 194 (397)
T 2zzr_A 122 SCTAEYRINGDVKALEATIKAADKLMERYQ-EKGGFIQAWGELG-YKE--HYRLIID-CLL--NIQLLFFAYEQTGDEKY 194 (397)
T ss_dssp THHHHHHHHCCHHHHHHHHHHHHHHHTTEE-TTTTEECCSSSTT-CGG--GCEEETT-HHH--HTHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHhC-cCCCEEEecccCC-CCC--CCceeec-hHh--HHHHHHHHHHHhCCHHH
Confidence 466688899999999999999999865322 1457777664210 000 0111111 111 13456678899999999
Q ss_pred HHHHHHHHHHHHHHhhhh----hhccc----ccc------cccccccc---cc--chHHHHHHHHHHcCCHHHHHHhhhc
Q 002872 268 LRMTTWMVEYFYNRVQNV----IKKYS----IER------HWQTLNEE---AG--GMNDVLYKLFCITQDPKHLMLAHLF 328 (872)
Q Consensus 268 L~va~~~ad~~~~~~~~~----~~~~~----~~~------~~~~l~~E---~G--GmneaL~~LY~~TGd~ryL~lA~~F 328 (872)
+++|.+.++.+.+.+-.. ..... ... ++..++.. +| -+..++..||+.|||++||++|+.+
T Consensus 195 ~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~l 274 (397)
T 2zzr_A 195 RQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGM 274 (397)
T ss_dssp HHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 999999999998765210 00000 000 11111110 01 1346899999999999999999865
Q ss_pred ccccccchhhccCCCCCCCcc-cCCc------ch-----hhHHHHHHHHhCC---hH--HHHHHHHHHHHHhccCeeeec
Q 002872 329 DKPCFLGLLALQADDISGFHS-NTHI------PI-----VIGSQMRYEVTGD---QL--HKTISMFFMDIVNSSHTYATG 391 (872)
Q Consensus 329 ~~~~~~~~l~~~~D~l~g~Ha-nthi------P~-----~~G~a~~Y~~TGD---~~--y~~aa~~fwd~V~~~h~Y~TG 391 (872)
.+- ++..+ ..|..+-.+. ...+ |- +.|..+++++|++ ++ |+++++...+.+.....-..|
T Consensus 275 a~~-~l~~~--~~d~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~~~ 351 (397)
T 2zzr_A 275 TNY-FLNRL--PEDKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIEQYSNNEL 351 (397)
T ss_dssp HHH-HHHTC--CTTSCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHHHHHTBCCCC
T ss_pred HHH-HHHhh--HHhCCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHHHHhccCC
Confidence 321 11111 0111110000 0111 21 2566778888987 77 999999988888753222223
Q ss_pred CCCCCCCCCCCcccccCCCCCcccccchHHHHHHHHHHhcccCC
Q 002872 392 GTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE 435 (872)
Q Consensus 392 G~g~~E~f~~p~~L~~~l~~~~~ETCas~nmlkl~~~Lf~~tgd 435 (872)
..+.+.--+.-+..+. ......|.+|+--++.+-|.++.++
T Consensus 352 ~~~~glL~h~~~~~~~---~~~~d~~~~~gDYy~~Eal~r~~~~ 392 (397)
T 2zzr_A 352 IAGRPLLLHGVYSWHS---GKGVDEGNIWGDYYYLEALIRFYKD 392 (397)
T ss_dssp CTTCCSBCCEEEETTT---TEEEEECBHHHHHHHHHHHHHHHSC
T ss_pred CCCCceeeeceeeCCC---CCCCCCCcchHHHHHHHHHHHHhcC
Confidence 2333322222222222 3467778999999999888888764
No 23
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.62 E-value=0.00036 Score=78.08 Aligned_cols=244 Identities=10% Similarity=-0.014 Sum_probs=129.4
Q ss_pred CChHHHHHHHHHHHHHHHHHhhcCCccee-cCCchh-hhhhhhcCCCccccchHHHHHHHHHHHHHHcCChhHHHHHHHH
Q 002872 197 HNESLKEKMSAVVSALSACQKEIGSGYLS-AFPTEQ-FDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWM 274 (872)
Q Consensus 197 ~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~-a~~~~~-f~~~~~l~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va~~~ 274 (872)
..++++++++.+++.|...++ .+|.+. .+++.. .+. +.-..| -|..+. .+.||..+|+.||+++.++.+.+.
T Consensus 23 ~~~~~~~~l~~~~~~l~~~~~--~~~~f~~~~~~~~~~d~--k~~~~W-~Wt~G~-~~~gl~~~ye~Tgd~~y~~~a~~~ 96 (382)
T 3pmm_A 23 ARSELQALIRNVTQNLVNIKD--ESGQFLLRLDDGRVIDT--KGWAGW-EWTHGV-GLYGIYQYYQQTGDIEMRDIIDRW 96 (382)
T ss_dssp CHHHHHHHHHHHHHHHHHCCC--TTCTTCEECTTSCEECS--SSTTSC-SHHHHH-HHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhccC--ccccccccCCccccccC--CCCcCc-cccHHH-HHHHHHHHHHHHCCHHHHHHHHHH
Confidence 457899999999999988777 555432 222111 000 011112 233343 556888999999999999999987
Q ss_pred HHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHHcCCHHHHHHhhhcccc---cccchhhccC--CCCCCCcc
Q 002872 275 VEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKP---CFLGLLALQA--DDISGFHS 349 (872)
Q Consensus 275 ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~~---~~~~~l~~~~--D~l~g~Ha 349 (872)
.+.+.+. +.+.. +...+.+-.+|.+||++|||++|++.|....+. .+......+- ......+.
T Consensus 97 ~~~~~~~------~~~~~------n~D~~~~~~~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~ 164 (382)
T 3pmm_A 97 FADRFAE------GATTK------NVNTMAPFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENH 164 (382)
T ss_dssp HHHHHHH------CCCCC------CTTTTTTHHHHHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCT
T ss_pred HHHHHcC------CCCcC------cccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCC
Confidence 7755321 11110 111222335789999999999999998755321 1111100000 00000000
Q ss_pred cCC-cc-hhh---HHHHHHHHhCChHHHHHHHHHHHHHhccCee--eecCCCCCCCCCCCcccccCCCCCccccc-----
Q 002872 350 NTH-IP-IVI---GSQMRYEVTGDQLHKTISMFFMDIVNSSHTY--ATGGTSVGEFWSDPKRLASNLDSNTEESC----- 417 (872)
Q Consensus 350 nth-iP-~~~---G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~Y--~TGG~g~~E~f~~p~~L~~~l~~~~~ETC----- 417 (872)
+.- +- +.+ -.+..|++|||+.|++.+.+-++...+ ++| .||-.-.+-.+. .. ....++|
T Consensus 165 ~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~-~l~D~~tGl~~h~~~~~-----~~---~~~~~~~WaRG~ 235 (382)
T 3pmm_A 165 QQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQ-NLMDRETGLWFHGWNYE-----GR---HNFARARWARGN 235 (382)
T ss_dssp TEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHBCTTTSCBCSEEETT-----TT---BCTTCCCBHHHH
T ss_pred CcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HccCCCCCCeeeeccCC-----CC---CCCCcceecccc
Confidence 000 00 112 246789999999999876554444433 333 233211100000 00 0012222
Q ss_pred --chHHHHHHHHHH-h--cccCCchhHHHHHHHHhhhhcccCCCCCCCcEEEeccCCCC
Q 002872 418 --TTYNMLKVSRHL-F--RWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPG 471 (872)
Q Consensus 418 --as~nmlkl~~~L-f--~~tgd~~YaD~~ERaLyN~iLa~q~~~d~g~~~Y~~PL~~g 471 (872)
..+++..+.+.| + ..+++.+|.+.+++.+ ++++..|+. + | +.+..+..|+
T Consensus 236 gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a-~~~~~~q~~-~-G-~W~~~~d~~~ 290 (382)
T 3pmm_A 236 SWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQI-AALAECQDD-S-G-LWHTLLDDPH 290 (382)
T ss_dssp HHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHH-HHHHHHCCT-T-S-CEESBTTCTT
T ss_pred cHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHH-HHHHHcCCC-C-C-ChhhccCCCC
Confidence 345666665554 1 2245577888887766 888888863 3 4 5665444443
No 24
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=97.39 E-value=0.00098 Score=75.19 Aligned_cols=194 Identities=11% Similarity=0.042 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhc-CCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHHc
Q 002872 184 HYLSASALMWASTHNESLKEKMSAVVSALSACQKEI-GSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYA 262 (872)
Q Consensus 184 hyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~-~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~t 262 (872)
-.+.|++. |..|+|++.++.+.++++.+.+.=... ..||..+..... +.....-.+.-.+|.+. +++..|+++
T Consensus 115 f~i~al~~-~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~----~~~~~~~~~n~~m~~~~-al~~l~~~t 188 (421)
T 2zbl_A 115 FALLGAAS-AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAF----SQTEDYRGGNANMHAVE-AFLIVYDVT 188 (421)
T ss_dssp HHHHHHHH-HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTS----CSBCSCEEHHHHHHHHH-HHHHHHHTT
T ss_pred HHHHHHHH-HHHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCC----CcccccCCCcHHHHHHH-HHHHHHHhh
Confidence 44567777 899999999999999999887643211 346766554221 10111101212335454 577899999
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhh-ccc--cccccccccc---------------cccc-h--HHHHHHHHHHc---CC
Q 002872 263 DNAEALRMTTWMVEYFYNRVQNVIK-KYS--IERHWQTLNE---------------EAGG-M--NDVLYKLFCIT---QD 318 (872)
Q Consensus 263 G~~~aL~va~~~ad~~~~~~~~~~~-~~~--~~~~~~~l~~---------------E~GG-m--neaL~~LY~~T---Gd 318 (872)
|+++.++.|.++++.+.+++.+... .+. ...-|..+.. +.|= + ...|.++|+.| ||
T Consensus 189 gd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~ 268 (421)
T 2zbl_A 189 HDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFE 268 (421)
T ss_dssp CCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccc
Confidence 9999999999999998765432110 000 0011111111 1221 1 13688999999 66
Q ss_pred --H-HHHHHhhhcccc---cccchh-hcc----CCCCC-----CCcccCCcchhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 002872 319 --P-KHLMLAHLFDKP---CFLGLL-ALQ----ADDIS-----GFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIV 382 (872)
Q Consensus 319 --~-ryL~lA~~F~~~---~~~~~l-~~~----~D~l~-----g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V 382 (872)
+ +|++.|..+.+. .+.++. ..+ .|.-. ....-.|...+++.+.+|++|||+.|++.++..|+.+
T Consensus 269 ~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~~~~ 348 (421)
T 2zbl_A 269 TPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYC 348 (421)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 5 899999665321 111111 000 00000 0000001112467888999999999999999888887
Q ss_pred h
Q 002872 383 N 383 (872)
Q Consensus 383 ~ 383 (872)
.
T Consensus 349 ~ 349 (421)
T 2zbl_A 349 I 349 (421)
T ss_dssp H
T ss_pred H
Confidence 4
No 25
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.15 E-value=0.0029 Score=70.40 Aligned_cols=185 Identities=14% Similarity=0.077 Sum_probs=106.5
Q ss_pred hHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCcccc--ch--HHHHHHHHHH-
Q 002872 183 GHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPY--YT--IHKILAGLLD- 257 (872)
Q Consensus 183 GhyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~py--y~--~HkI~aGLld- 257 (872)
..++-|++..|..|+|++.++.+.++++.+.+.-...+.|++.+... .|.++ .+ +|.+.+ ++.
T Consensus 125 af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~~~~~-----------~~~~~~~~~~~m~~~~~-~l~l 192 (402)
T 1fp3_A 125 CFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGRPQLP-----------GAVASESMAVPMMLLCL-VEQL 192 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCCCCCT-----------TSCCEEETHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhccCCCcccCcccc-----------CccCCCCcchHHHHHHH-HHHH
Confidence 46788888889999999999999999998887653125677643221 12221 12 344433 334
Q ss_pred --HHHHcCChhHHHHHHHHHHHHHHHhhhh---hhcccccccccccc------ccccchHH---HHHHHHHHcCCHHHHH
Q 002872 258 --QYTYADNAEALRMTTWMVEYFYNRVQNV---IKKYSIERHWQTLN------EEAGGMND---VLYKLFCITQDPKHLM 323 (872)
Q Consensus 258 --~y~~tG~~~aL~va~~~ad~~~~~~~~~---~~~~~~~~~~~~l~------~E~GGmne---aL~~LY~~TGd~ryL~ 323 (872)
.|..+++ ..++.+.++.+.+..++... +...-+. -|.... .+.|=+.+ .|++++++|||++|++
T Consensus 193 ~~l~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~e~~d~-dw~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~ 270 (402)
T 1fp3_A 193 GEEDEELAG-RYAQLGHWCARRILQHVQRDGQAVLENVSE-DGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRA 270 (402)
T ss_dssp HTTCHHHHH-HTHHHHHHHHHHHHTTEETTTTEECSEEET-TSCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHhcCc-HHHHHHHHHHHHHHHHhCcCCCeEEEEECC-CCCccCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHH
Confidence 4555644 36778888887775542110 0000001 121110 11110122 6889999999999999
Q ss_pred HhhhcccccccchhhccCCCC-CC-Ccc---cCCcc---------------hhhHHHHHHHHhCChHHHHHHHHHHHHHh
Q 002872 324 LAHLFDKPCFLGLLALQADDI-SG-FHS---NTHIP---------------IVIGSQMRYEVTGDQLHKTISMFFMDIVN 383 (872)
Q Consensus 324 lA~~F~~~~~~~~l~~~~D~l-~g-~Ha---nthiP---------------~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~ 383 (872)
.|+...+.. ++..+-|.- .+ .|. ..+.+ .+.|.+..|++|||+.|++.++..|+.+.
T Consensus 271 ~A~~~~~~~---~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~~~~~ 347 (402)
T 1fp3_A 271 HVIDTFLLL---PFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTF 347 (402)
T ss_dssp HHHHHHTHH---HHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 997653211 001111100 00 111 01111 15788999999999999999999888875
Q ss_pred c
Q 002872 384 S 384 (872)
Q Consensus 384 ~ 384 (872)
+
T Consensus 348 ~ 348 (402)
T 1fp3_A 348 R 348 (402)
T ss_dssp H
T ss_pred H
Confidence 4
No 26
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=96.19 E-value=0.064 Score=63.00 Aligned_cols=252 Identities=12% Similarity=0.032 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhh------------cCCCccccc------hHHHHHHHHHHHHH
Q 002872 199 ESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEA------------LIPVWAPYY------TIHKILAGLLDQYT 260 (872)
Q Consensus 199 ~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~------------l~~~W~pyy------~~HkI~aGLld~y~ 260 (872)
+.+.+.+..-+|.|.+||. ++|++-.- ..+.|.. -.....+.| ..-...|+|-.+++
T Consensus 190 ~~lldE~rWg~D~llkm~~--~~g~~y~q---Vgd~W~~d~~~R~~~~~~~~~~~~~~~y~~~~~~~agl~aAALA~Asr 264 (586)
T 3h7l_A 190 TRLIEEALFGADFLVRMQN--EKGFFYMT---VFDKWSKDTAQREICAYETQLGHKFDDYQAGFRQGGGVAIAALAAASR 264 (586)
T ss_dssp HHHHHHHHHHHHHHHHTBC--TTSCBBCE---EECTTCCCGGGCEEEEEETTTTEEESCCBCCGGGTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhccc--CCCeEEEE---ecCCCCCCCCccccccccCCCCCCCcceecCCCCcHHHHHHHHHHHhc
Confidence 4777888888999999999 88885321 1111211 001111111 11123455544555
Q ss_pred H-----cCChhHHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHHcCCHHHHHHhhhccc-----
Q 002872 261 Y-----ADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDK----- 330 (872)
Q Consensus 261 ~-----tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~----- 330 (872)
. .+.++.|+.|++..+|+.+....... ..- .-...|+ -+..+.+|||+.|||++||+.|..+.+
T Consensus 265 vf~d~~~~a~~~L~aA~~a~~fa~~~~~~y~~----~g~-~~~~De~-~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~ 338 (586)
T 3h7l_A 265 LGVHGEYDQQKYRNAAENGYWHLKEHNTQYLN----DGE-ENIIDEY-CALLASVELFKATKETRYLEESRLWAQRLVAR 338 (586)
T ss_dssp SSSCSSSCHHHHHHHHHHHHHHHHHHHHHHST----TSC-CCHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCcChHHHHHHHHHHHHHHHhcCccccC----CCC-ccchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 5 45679999999999999765332211 110 1112343 235789999999999999998876321
Q ss_pred ------ccccchhhccCCCCCCCcccCCcchhhHHHHHHHHhCChHHHH----HHHHHHH---HHhcc--------Ceee
Q 002872 331 ------PCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKT----ISMFFMD---IVNSS--------HTYA 389 (872)
Q Consensus 331 ------~~~~~~l~~~~D~l~g~HanthiP~~~G~a~~Y~~TGD~~y~~----aa~~fwd---~V~~~--------h~Y~ 389 (872)
..+++.-... ..-+..|+...---++..++..++++|+.+++ ..+...+ .++++ +.|+
T Consensus 339 ~~~~~~~g~~w~~~d~-~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~ 417 (586)
T 3h7l_A 339 QMSDEQIQHFWSANQD-GSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYV 417 (586)
T ss_dssp EECCSSCSSEEBSSSS-SSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEE
T ss_pred ccCCccCCCcCCCccc-CCcccccccccHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHHh
Confidence 1122211000 01122333321112344566788999864433 3333333 23322 2455
Q ss_pred ecCCC-CCCCCCCCcccccCCCCCc-ccccchHHHHHHHHHHhcccCC----chhHHHHHHHHhhhhcccCCCCCCCcEE
Q 002872 390 TGGTS-VGEFWSDPKRLASNLDSNT-EESCTTYNMLKVSRHLFRWTKE----IAYADYYERSLTNGVLGIQRGTEPGVMI 463 (872)
Q Consensus 390 TGG~g-~~E~f~~p~~L~~~l~~~~-~ETCas~nmlkl~~~Lf~~tgd----~~YaD~~ERaLyN~iLa~q~~~d~g~~~ 463 (872)
.+..+ ....|+-|..-.. ..-- .+.=..-|...++-.-..+++| .+|.|.....+ |=|||.- | -.+.
T Consensus 418 ~~~~~~~~~~y~~p~~~~~--~y~WqGsN~~~an~a~~~~~a~~~~~~~~~~~~y~~~a~~ql-dyiLG~N-p---~~~s 490 (586)
T 3h7l_A 418 KGVNESKRDAFFVAHNNES--GYWWQGENARLGSLATMAYLAQPHIASQEIQQQLSVFAQDAL-NWIVGLN-P---YDMC 490 (586)
T ss_dssp CCTTSCCEEESSCCSSSTT--SSCCCCCHHHHHHHHHHHHHSGGGCCCHHHHHHHHHHHHHHH-HHHBTCS-T---TCCB
T ss_pred hhhccccccccccccCCCC--CCeeeChHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHhh-hhhccCC-C---CCCc
Confidence 43222 2233333321100 0112 3333445666677777788998 78888887776 7778752 2 2345
Q ss_pred EeccCC
Q 002872 464 YLLPLA 469 (872)
Q Consensus 464 Y~~PL~ 469 (872)
|+...+
T Consensus 491 ~v~G~G 496 (586)
T 3h7l_A 491 MLDGHG 496 (586)
T ss_dssp CBTTSS
T ss_pred cEEeeC
Confidence 555444
No 27
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=96.05 E-value=0.047 Score=62.69 Aligned_cols=206 Identities=11% Similarity=0.051 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHHHHhhhhhhccccc-----------cccc----cccccccchHHHHHHHHHH
Q 002872 251 ILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIE-----------RHWQ----TLNEEAGGMNDVLYKLFCI 315 (872)
Q Consensus 251 I~aGLld~y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~-----------~~~~----~l~~E~GGmneaL~~LY~~ 315 (872)
++-|||.+|..+|++..|+.|..+||.+..-|.. ..+.+.. ..|. ..-.|.|.+..-+.+|.++
T Consensus 110 ~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdT-ptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~l 188 (478)
T 1nxc_A 110 FVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHT-PSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHL 188 (478)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCS-SSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHH
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcC-CCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHH
Confidence 5789999999999999999999999999766532 1111100 0111 1224667777778999999
Q ss_pred cCCHHHHHHhhhcccccccchhh-------ccCCCCCCCcccCCcchh-------hHHHHHHHHhC--ChHHHHHHHHHH
Q 002872 316 TQDPKHLMLAHLFDKPCFLGLLA-------LQADDISGFHSNTHIPIV-------IGSQMRYEVTG--DQLHKTISMFFM 379 (872)
Q Consensus 316 TGd~ryL~lA~~F~~~~~~~~l~-------~~~D~l~g~HanthiP~~-------~G~a~~Y~~TG--D~~y~~aa~~fw 379 (872)
|||++|.+.|++..+. ++... ..-|.-+|...+.++-+- +-..+.|.++| |+.|++.-....
T Consensus 189 TGd~~Y~~~a~~~~~~--l~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~d~~~~~m~~~a~ 266 (478)
T 1nxc_A 189 SGDPVFAEKVMKIRTV--LNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFDAV 266 (478)
T ss_dssp HCCTHHHHHHHHHHHH--HHHSCCGGGCCCSEECTTTCCBCSCEECSSTTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HCChHHHHHHHHHHHH--HHhcCCCCCccccccCCCCCCccCceeeecCCCchHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 9999999999886421 11100 001111222212222111 11456678887 678888877777
Q ss_pred HHHhccCeeeecCCCCCCCCCCCcccccC-CCCCcccccchHHHHHHHHHHhcccCCchhHHHHHHH------Hhhhhcc
Q 002872 380 DIVNSSHTYATGGTSVGEFWSDPKRLASN-LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS------LTNGVLG 452 (872)
Q Consensus 380 d~V~~~h~Y~TGG~g~~E~f~~p~~L~~~-l~~~~~ETCas~nmlkl~~~Lf~~tgd~~YaD~~ERa------LyN~iLa 452 (872)
+.|.+ |+.-.. . .+-.|..... .+. .+....=+|=.-+|+-+.-.++......+|++..++. .|+....
T Consensus 267 ~~i~~-~l~~~~-~-~~~~~v~~~~-~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~~~y~~~~t 342 (478)
T 1nxc_A 267 QAIET-HLIRKS-S-GGLTYIAEWK-GGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHESYNRTYV 342 (478)
T ss_dssp HHHHH-HTEEEC-T-TSCEEECEEE-TTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHH-HhcccC-C-CCcEEEEecc-CCcccccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHhccc
Confidence 77764 433211 0 0111110000 000 0233455898899988887766554556777776654 3555444
Q ss_pred cCCCCCCCcEEEecc
Q 002872 453 IQRGTEPGVMIYLLP 467 (872)
Q Consensus 453 ~q~~~d~g~~~Y~~P 467 (872)
+.-| ..+++++
T Consensus 343 gl~P----E~~~~~~ 353 (478)
T 1nxc_A 343 KLGP----EAFRFDG 353 (478)
T ss_dssp SSCC----SEEESST
T ss_pred CCCC----eEEEecc
Confidence 4433 3455543
No 28
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.63 E-value=0.06 Score=61.36 Aligned_cols=249 Identities=12% Similarity=0.120 Sum_probs=125.5
Q ss_pred CChHHHHHHHHHHHHHHHH---H--hh-cCCcceec--CCchhhhhhhhcC-CCccccchHHHHHHHHHHHHHHcCChhH
Q 002872 197 HNESLKEKMSAVVSALSAC---Q--KE-IGSGYLSA--FPTEQFDRLEALI-PVWAPYYTIHKILAGLLDQYTYADNAEA 267 (872)
Q Consensus 197 ~D~~L~~k~d~~Vd~L~~~---Q--~~-~~dGYL~a--~~~~~f~~~~~l~-~~W~pyy~~HkI~aGLld~y~~tG~~~a 267 (872)
..+++++++|.+++.|.+. | .+ .+.=+++- .+... .+.... ..|. |..-..+.||...|+.||+++.
T Consensus 28 ~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--y~~Gv~l~gl~~ay~~Tgd~kY 103 (445)
T 3k11_A 28 TPEQVKKDIDRVFAYIDKETPARVVDKNTGKVITDYTAMGDEA--QLERGAFRLAS--YEWGVTYSALIAAAETTGDKRY 103 (445)
T ss_dssp CHHHHHHHHHHHHHHHHHTSCCCEEETTTCCEECCTTTCCTTE--EECCCSSCTTS--HHHHHHHHHHHHHHHHHCCHHH
T ss_pred CHHHHHHHHHHHHHHHhccCcceeecCCCCceecccccccccc--ccccCCcccCc--cCHHHHHHHHHHHHHHHCCHHH
Confidence 4577888999999998872 1 11 01111110 11100 000011 1111 3445567899999999999999
Q ss_pred HHHHHHHHHHHHHHhh---hhhhcc-cc-ccc-----cccccccccchHHHHHHHHHHcCCHHHHHHhhhcccccccchh
Q 002872 268 LRMTTWMVEYFYNRVQ---NVIKKY-SI-ERH-----WQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLL 337 (872)
Q Consensus 268 L~va~~~ad~~~~~~~---~~~~~~-~~-~~~-----~~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~~~~~~~l 337 (872)
++.+.+.+|++.+.+. ....+. .. .++ ...+. -.|-|..+|.++|+.|+|++|++.|....+. +...
T Consensus 104 ~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LD-D~g~~~~~Li~lY~~T~d~~yl~~a~~~ad~-L~~~- 180 (445)
T 3k11_A 104 TDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALD-DAGAVCTAMIKLRLKDESLPVDGLIQNYFDF-IINK- 180 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGG-GTHHHHHHHHHHHHHCTTCCCHHHHHHHHHH-HHHT-
T ss_pred HHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcch-hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-HHHc-
Confidence 9999999998764321 011000 00 000 01122 2355678999999999999999998754220 0000
Q ss_pred hccCCCCCCC-cccCCcc-h-----hhH---HHHHHHHhCChH--HHHHHHHHHHHHhccCee--eecCCCCCCCCCCCc
Q 002872 338 ALQADDISGF-HSNTHIP-I-----VIG---SQMRYEVTGDQL--HKTISMFFMDIVNSSHTY--ATGGTSVGEFWSDPK 403 (872)
Q Consensus 338 ~~~~D~l~g~-HanthiP-~-----~~G---~a~~Y~~TGD~~--y~~aa~~fwd~V~~~h~Y--~TGG~g~~E~f~~p~ 403 (872)
..+..-.++ |....-. + .++ .+..+++|||++ |.+.+.+-+....+ +++ .||-.-.+ |....
T Consensus 181 -~pRt~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~-~l~D~~tGL~~Hg--~~~~~ 256 (445)
T 3k11_A 181 -EYRLADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFAD-RMFIPEKGLYRHG--WVESS 256 (445)
T ss_dssp -SCBCTTCCBCBCSSSTTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH-HHEETTTTEECSE--EETTC
T ss_pred -CCCCCCCceeecCCCCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHHH-hcccCCCCCEeee--ecCCC
Confidence 000111111 3211111 1 133 356689999999 88755554444332 333 12211100 10000
Q ss_pred ccccCCCCCcccc-------cchHHHHHHHHHHhc-ccCCchhHHHHHHHHhhhhcccCCCCCCCcEEEecc
Q 002872 404 RLASNLDSNTEES-------CTTYNMLKVSRHLFR-WTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLP 467 (872)
Q Consensus 404 ~L~~~l~~~~~ET-------Cas~nmlkl~~~Lf~-~tgd~~YaD~~ERaLyN~iLa~q~~~d~g~~~Y~~P 467 (872)
....+. =..++|..+.+.|=. .++...|.+.+.+.+ ++++..|+. .| +.+..+
T Consensus 257 -------~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a-~~l~~~Q~~--~G-~W~~vl 317 (445)
T 3k11_A 257 -------TDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHV-RGVTALQSG--EG-FWHQLL 317 (445)
T ss_dssp -------SSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHH-HHHHTTCCT--TS-CEESBT
T ss_pred -------CCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHH-HHHHHhCCC--CC-chhhcc
Confidence 001122 233555555554432 244566777777666 888888863 34 565443
No 29
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=95.36 E-value=0.15 Score=58.92 Aligned_cols=246 Identities=14% Similarity=0.095 Sum_probs=133.5
Q ss_pred cchhhHHHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHH
Q 002872 179 GHFVGHYLSASALMWASTHN--ESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLL 256 (872)
Q Consensus 179 Gh~~GhyLsA~A~~~a~t~D--~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLl 256 (872)
|.+.=-=|.-+..|+....+ +.+++..++.++.|.+.-.=.-|+-++. |+. +| .++-|||
T Consensus 48 G~TlVDSLDTL~IM~~~~~~~~~gl~~Ef~~A~~~V~~~l~F~~d~~Vsv-----FET------------tI-R~LGGLL 109 (511)
T 1dl2_A 48 GWIIVDSVDTLMLMYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNV-----FET------------TI-RMLGGLL 109 (511)
T ss_dssp CTTHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHTCCCCCSSEEEH-----HHH------------HH-HHHHHHH
T ss_pred ceeeeecccceEEeccccccccCCcHHHHHHHHHHHHHhcCCCCCceech-----hhe------------eh-hhhhhhh
Confidence 33333345555555432222 3677777777777765322112333332 221 22 2578999
Q ss_pred HHHHHc------CChhHHHHHHHHHHHHHHHhhhhhhcccc-----------cccc---ccccccccchHHHHHHHHHHc
Q 002872 257 DQYTYA------DNAEALRMTTWMVEYFYNRVQNVIKKYSI-----------ERHW---QTLNEEAGGMNDVLYKLFCIT 316 (872)
Q Consensus 257 d~y~~t------G~~~aL~va~~~ad~~~~~~~~~~~~~~~-----------~~~~---~~l~~E~GGmneaL~~LY~~T 316 (872)
.+|..+ |++..|+.|..+||.+..-|..-..+.+. ..++ ...-.|.|.+..=+..|-++|
T Consensus 110 SAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LT 189 (511)
T 1dl2_A 110 SAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLT 189 (511)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHH
T ss_pred hHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHH
Confidence 999999 99999999999999998766511112211 0111 112246677778889999999
Q ss_pred CCHHHHHHhhhcccccccchhh---ccCCCC--------CCCcccCCcchh-------hHHHHHHHHhCChHHHHHHHHH
Q 002872 317 QDPKHLMLAHLFDKPCFLGLLA---LQADDI--------SGFHSNTHIPIV-------IGSQMRYEVTGDQLHKTISMFF 378 (872)
Q Consensus 317 Gd~ryL~lA~~F~~~~~~~~l~---~~~D~l--------~g~HanthiP~~-------~G~a~~Y~~TGD~~y~~aa~~f 378 (872)
||++|.+.|++..+. ++... ...+.| .|.....++-+- +-..+.|.+++|+.|++.=...
T Consensus 190 Gd~~Y~~~a~r~~~~--l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYLlK~~il~~d~~y~~m~~~a 267 (511)
T 1dl2_A 190 GNRTYWELVERVYEP--LYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETLYYDLYRKS 267 (511)
T ss_dssp TCHHHHHHHHTTHHH--HHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHH--HHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 999999999986421 11110 011122 222212222211 1246778888999998887777
Q ss_pred HHHHhccCeeeecCCCCCCCCCCCcc--cccCC-CCCcccccchHHHHHHHHHHhccc---------CCchhHHHHHHHH
Q 002872 379 MDIVNSSHTYATGGTSVGEFWSDPKR--LASNL-DSNTEESCTTYNMLKVSRHLFRWT---------KEIAYADYYERSL 446 (872)
Q Consensus 379 wd~V~~~h~Y~TGG~g~~E~f~~p~~--L~~~l-~~~~~ETCas~nmlkl~~~Lf~~t---------gd~~YaD~~ERaL 446 (872)
.+.|.+ |++-... ..+-.|..... ..+.+ +....=+|=.-+|+-|... ..+. .+.+|++.-++..
T Consensus 268 ~~~i~~-~L~~~~~-~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~~aLg~~-~~~~~~~a~~~~~~~~~~~~~a~~l~ 344 (511)
T 1dl2_A 268 MEGMKK-HLLAQSK-PSSLWYIGEREQGLHGQLSPKMDHLVCFMGGLLASGST-EGLSIHEARRRPFFSKSDWDLAKGIT 344 (511)
T ss_dssp HHHHHH-HTEEECT-TTCCEEECBBTTCTTSCCBCEEEGGGGGHHHHHHHHHH-TTCCHHHHTTSTTCCHHHHHHHHHHH
T ss_pred HHHHHH-HhccCCC-CCCcEEEEEeecCCCCccccccchhhhchhHHHHhccc-cCCChhhhhhcccccHHHHHHHHHHH
Confidence 777764 4442210 01101110000 00111 2334567999999888762 2221 1235777766654
Q ss_pred h
Q 002872 447 T 447 (872)
Q Consensus 447 y 447 (872)
.
T Consensus 345 ~ 345 (511)
T 1dl2_A 345 D 345 (511)
T ss_dssp H
T ss_pred H
Confidence 3
No 30
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=95.31 E-value=0.076 Score=59.73 Aligned_cols=190 Identities=11% Similarity=-0.015 Sum_probs=106.5
Q ss_pred hhHHHHHHHHHHHhcCChHHHHH-HHHHHHHHHHHHhhc----CCcceecCCchhhhhhhh-cCCCccccchHHHHHHHH
Q 002872 182 VGHYLSASALMWASTHNESLKEK-MSAVVSALSACQKEI----GSGYLSAFPTEQFDRLEA-LIPVWAPYYTIHKILAGL 255 (872)
Q Consensus 182 ~GhyLsA~A~~~a~t~D~~L~~k-~d~~Vd~L~~~Q~~~----~dGYL~a~~~~~f~~~~~-l~~~W~pyy~~HkI~aGL 255 (872)
..-+|-++-..+..++|+++.+. +.++++.+.+.-+.. .... ..|- .+ .|.. ..-.|+-=.++ |+..|
T Consensus 167 ~AG~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~--~~pl-~~-~w~~~~~~G~aHG~aG--I~~~L 240 (411)
T 3e6u_A 167 RIGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTA--KSPL-MY-EWYQEYYVGAAHGLAG--IYYYL 240 (411)
T ss_dssp HHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTT--TCSC-CC-CBTTBCBCSTTTSHHH--HHHHH
T ss_pred cHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccC--CCCc-ce-eecCccCCcccccHHH--HHHHH
Confidence 34577788888888998775544 466666666543210 0000 0000 00 0100 01112221222 45556
Q ss_pred HHHHHHcCChhHHHHHHHHHHHHHHHhhhhhhccccc---ccccccccccc--chHHHHHHHHHHcCCHHHHHHhhhccc
Q 002872 256 LDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIE---RHWQTLNEEAG--GMNDVLYKLFCITQDPKHLMLAHLFDK 330 (872)
Q Consensus 256 ld~y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~---~~~~~l~~E~G--GmneaL~~LY~~TGd~ryL~lA~~F~~ 330 (872)
+..++.+++++.++.+.+..+|+.+...+. ..++.. ......+-=+| |+-.+|..+++.++|++|++.|...-+
T Consensus 241 l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~-g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~ 319 (411)
T 3e6u_A 241 MQPSLQVSQGKLHSLVKPSVDYVCQLKFPS-GNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCAD 319 (411)
T ss_dssp TCGGGCCCHHHHHHTHHHHHHHHHHTCCTT-SCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHhhcChHHHHHHHHHHHHHHHHhhccC-CCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 667778999999999999999997653210 111100 00000111234 788999999999999999999986532
Q ss_pred ccccchhhccCCCCCCCcccCCcch--hhHHHHHHHHhCChHHHHHHHHHHHHHhc
Q 002872 331 PCFLGLLALQADDISGFHSNTHIPI--VIGSQMRYEVTGDQLHKTISMFFMDIVNS 384 (872)
Q Consensus 331 ~~~~~~l~~~~D~l~g~HanthiP~--~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~ 384 (872)
. .+.. + .+...+..-|.-- ..-..+.|+.|||+.|++.+..+.+.+.+
T Consensus 320 ~--~~~~--g--~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~~~~~ 369 (411)
T 3e6u_A 320 V--IWQY--G--LLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLE 369 (411)
T ss_dssp H--HHHH--C--SBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTT
T ss_pred H--HHhc--C--ccCCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 1 1110 0 0001112223331 22356779999999999999999888765
No 31
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=94.02 E-value=2 Score=48.67 Aligned_cols=227 Identities=13% Similarity=0.126 Sum_probs=115.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcceecC-Cch-----hhhhhhhc---CCCcc-----ccchHH-HHHHHHHHHHHHc
Q 002872 198 NESLKEKMSAVVSALSACQKEIGSGYLSAF-PTE-----QFDRLEAL---IPVWA-----PYYTIH-KILAGLLDQYTYA 262 (872)
Q Consensus 198 D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~-~~~-----~f~~~~~l---~~~W~-----pyy~~H-kI~aGLld~y~~t 262 (872)
-+.+++.+..-.|.|.+||. ++|.+-.- ... .+.+-|+. +..+. |--..- ..-|+|-++++.-
T Consensus 89 ~~d~ldeikwg~D~llk~~~--~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~as~vf 166 (433)
T 1ks8_A 89 LDDGRKAVKWATDYFIKAHT--SQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVF 166 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--BTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHHHHHhc
Confidence 37888899999999999999 66643211 010 11111211 11110 111111 2233333344443
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhhhhccccc-cccc--cccccccchHHHHHHHHHHcCCHHHHHHhhhcccccc
Q 002872 263 DN------AEALRMTTWMVEYFYNRVQNVIKKYSIE-RHWQ--TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCF 333 (872)
Q Consensus 263 G~------~~aL~va~~~ad~~~~~~~~~~~~~~~~-~~~~--~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~~~~ 333 (872)
.+ ++.|+.|+++-+|..+.-+......+.. .... -...| +..+-+|||+.|||++||+.|+.+... +
T Consensus 167 k~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE---~~WAAa~Ly~aTgd~~Yl~~~~~~~~~-~ 242 (433)
T 1ks8_A 167 RNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDE---LVWAAAWLYRATNDNTYLNTAESLYDE-F 242 (433)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHH---HHHHHHHHHHHHCCHHHHHHHHHHHHH-T
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccH---HHHHHHHHHHHhCCHHHHHHHHHHHHh-c
Confidence 32 5788888888888865311100000000 0000 00112 235778999999999999998875321 1
Q ss_pred cchhhccCCCCCCCcccCCcchhhHHH-HHHHHhCChHHHHHHHHHHHHHhccCeeeecCCCCCCCCCCCcccccCCCCC
Q 002872 334 LGLLALQADDISGFHSNTHIPIVIGSQ-MRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSN 412 (872)
Q Consensus 334 ~~~l~~~~D~l~g~HanthiP~~~G~a-~~Y~~TGD~~y~~aa~~fwd~V~~~h~Y~TGG~g~~E~f~~p~~L~~~l~~~ 412 (872)
.. ........ ..+ +..|.. .+.++++++.|++.++.+.+.+...-.+--||..-...|
T Consensus 243 -~~-~~~~~~~~--Wd~----~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~W------------- 301 (433)
T 1ks8_A 243 -GL-QNWGGGLN--WDS----KVSGVQVLLAKLTNKQAYKDTVQSYVNYLINNQQKTPKGLLYIDMW------------- 301 (433)
T ss_dssp -TG-GGSCCCCC--SSC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCST-------------
T ss_pred -Cc-CcCcCCcC--ccc----hhhHHHHHHhhccChHHHHHHHHHHHHHHHhcCCcCCCCceeecCC-------------
Confidence 00 00000111 111 123433 345788999999999998888764222211222111111
Q ss_pred cccccchHHHHHHHHHHhcc-cCCchhHHHHHHHHhhhhccc
Q 002872 413 TEESCTTYNMLKVSRHLFRW-TKEIAYADYYERSLTNGVLGI 453 (872)
Q Consensus 413 ~~ETCas~nmlkl~~~Lf~~-tgd~~YaD~~ERaLyN~iLa~ 453 (872)
...=-+.|+.+++-....+ +++.+|.+...+.+ |=|||.
T Consensus 302 -Gs~~~~~n~a~l~~~~~~~~~~~~~y~~~A~~ql-dYiLG~ 341 (433)
T 1ks8_A 302 -GTLRHAANAAFIMLEAAELGLSASSYRQFAQTQI-DYALGD 341 (433)
T ss_dssp -THHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHH-HHHHTT
T ss_pred -chhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhH-hhccCC
Confidence 1111122444444455556 78899999988766 888986
No 32
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=93.81 E-value=0.62 Score=54.15 Aligned_cols=186 Identities=13% Similarity=0.080 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHHHHhhhhhhcccccc-----------cc--ccccccccchHHHHHHHHHHcC
Q 002872 251 ILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIER-----------HW--QTLNEEAGGMNDVLYKLFCITQ 317 (872)
Q Consensus 251 I~aGLld~y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~~-----------~~--~~l~~E~GGmneaL~~LY~~TG 317 (872)
++-|||.+|..+|++..|+.|..+||.+..-|.. ..+.+..+ .| ...-.|.|.+..-+..|-++||
T Consensus 174 ~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdT-ptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTG 252 (538)
T 1x9d_A 174 ILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRT-PSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTG 252 (538)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCS-TTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHC
T ss_pred hhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcC-CCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhC
Confidence 5789999999999999999999999999765531 11111100 01 1122466777778899999999
Q ss_pred CHHHHHHhhhcccccccchhhccCCCC--------CCCcccC-Ccchh-------hHHHHHHHHhC--ChHHHHHHHHHH
Q 002872 318 DPKHLMLAHLFDKPCFLGLLALQADDI--------SGFHSNT-HIPIV-------IGSQMRYEVTG--DQLHKTISMFFM 379 (872)
Q Consensus 318 d~ryL~lA~~F~~~~~~~~l~~~~D~l--------~g~Hant-hiP~~-------~G~a~~Y~~TG--D~~y~~aa~~fw 379 (872)
|++|.+.|++..+. ++......+.| .|...+. ++-+- +-..+.|.++| |+.|++.-....
T Consensus 253 d~~Y~~~a~r~~~~--l~~~~~~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~d~~y~~my~~a~ 330 (538)
T 1x9d_A 253 DKKFQEAVEKVTQH--IHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLLEDYVEAI 330 (538)
T ss_dssp CTHHHHHHHHHHHH--HHTCSCCBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH--HHhcccCCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 99999999876321 11110001111 1111111 11111 12467788898 888888777777
Q ss_pred HHHhccCeeeecCCCCCCCCCCCcccccCC-CCCcccccchHHHHHHHHHHhcccCCchhHHHHHHH
Q 002872 380 DIVNSSHTYATGGTSVGEFWSDPKRLASNL-DSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS 445 (872)
Q Consensus 380 d~V~~~h~Y~TGG~g~~E~f~~p~~L~~~l-~~~~~ETCas~nmlkl~~~Lf~~tgd~~YaD~~ERa 445 (872)
+.|.+ |++-.... .+-.|..... .+.+ +....=+|=.-+|+-+...++. +.+|++.-++.
T Consensus 331 ~~i~~-~L~~~~~~-~~~~~v~~~~-~g~~~~~~~hL~cF~gG~~aLgg~~~~---~~~~l~~a~~L 391 (538)
T 1x9d_A 331 EGVRT-HLLRHSEP-SKLTFVGELA-HGRFSAKMDHLVCFLPGTLALGVYHGL---PASHMELAQEL 391 (538)
T ss_dssp HHHHH-HTEEECTT-TCCEEECEEE-TTEEECEEEGGGGHHHHHHHHHHHTTC---CHHHHHHHHHH
T ss_pred HHHHH-HhccCCCC-CCceEEEecc-CCccCcccchHhhhhhhHHHhcCcccC---cHHHHHHHHHH
Confidence 77754 44322100 0000100000 0001 2345568999999999988753 34566665543
No 33
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=92.66 E-value=0.2 Score=57.62 Aligned_cols=193 Identities=19% Similarity=0.151 Sum_probs=106.4
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhh----cCCCccccchHHHHHHHHHHHHHHcC--Chh
Q 002872 193 WASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEA----LIPVWAPYYTIHKILAGLLDQYTYAD--NAE 266 (872)
Q Consensus 193 ~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~----l~~~W~pyy~~HkI~aGLld~y~~tG--~~~ 266 (872)
-..|+|+++.+++.++.+.|.+.|. .+|-++.+-...-..|.. +...=-.|| .-|+.+|..+| +++
T Consensus 186 S~lTGd~~Y~~~a~~~~~~l~~~~~--~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~d~~ 257 (478)
T 1nxc_A 186 SHLSGDPVFAEKVMKIRTVLNKLDK--PEGLYPNYLNPSSGQWGQHHVSVGGLGDSFY------EYLLKAWLMSDKTDLE 257 (478)
T ss_dssp HHHHCCTHHHHHHHHHHHHHHHSCC--GGGCCCSEECTTTCCBCSCEECSSTTTHHHH------HHHHHHHHHTTTCCHH
T ss_pred HHHHCChHHHHHHHHHHHHHHhcCC--CCCccccccCCCCCCccCceeeecCCCchHH------HHHHHHHHHcCCchHH
Confidence 3579999999999999999988877 667655442110001110 000001344 34678888888 467
Q ss_pred HHHHHHHHHHHHHHHhhhhh-hccc------cc--cc-cccccccccchHHHHH-HHHHHcCCHHHHHHhhhcccccc--
Q 002872 267 ALRMTTWMVEYFYNRVQNVI-KKYS------IE--RH-WQTLNEEAGGMNDVLY-KLFCITQDPKHLMLAHLFDKPCF-- 333 (872)
Q Consensus 267 aL~va~~~ad~~~~~~~~~~-~~~~------~~--~~-~~~l~~E~GGmneaL~-~LY~~TGd~ryL~lA~~F~~~~~-- 333 (872)
.+++-....+-+.+.+.... .++. .. .+ ..-+.|-.|||- +|. ++......++|+++|+.+.+.|+
T Consensus 258 ~~~m~~~a~~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~-aLg~~~~~~~~~~~~l~~a~~l~~tC~~~ 336 (478)
T 1nxc_A 258 AKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMF-ALGADGAPEARAQHYLELGAEIARTCHES 336 (478)
T ss_dssp HHHHHHHHHHHHHHHTEEECTTSCEEECEEETTEEECEEETGGGGHHHHH-HHTSTTSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCCcEEEEeccCCcccccccchhhhhHHHH-HhccccccccchHHHHHHHHHHHHHHHHH
Confidence 77777777777665442100 0000 00 00 112456667763 221 22222234789999987643321
Q ss_pred -------cchhhccCCCC---CC----CcccCCcc-hhhHHHHHHHHhCChHHHHHHHHHHHHHhccCeeeecCCCC
Q 002872 334 -------LGLLALQADDI---SG----FHSNTHIP-IVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSV 395 (872)
Q Consensus 334 -------~~~l~~~~D~l---~g----~HanthiP-~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~Y~TGG~g~ 395 (872)
+.|....-+.- .. .-.+--=| .++..-.+|++|||+.|++.+...++.+.+ +.-+-+|.++
T Consensus 337 y~~~~tgl~PE~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k-~~r~~~G~a~ 412 (478)
T 1nxc_A 337 YNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALES-HCRVNGGYSG 412 (478)
T ss_dssp HHTSSSSSCCSEEESSTTCSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HTEETTEECC
T ss_pred HHhcccCCCCeEEEeccCcccccccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-Hhhccccccc
Confidence 22222111000 00 00012223 357778889999999999999998888874 5555666654
No 34
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=92.16 E-value=6.3 Score=44.65 Aligned_cols=240 Identities=13% Similarity=0.093 Sum_probs=118.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcceec-CCch-----hhhhhhhc---CCC-cc-----ccchH-HHHHHHHHHHHHH
Q 002872 198 NESLKEKMSAVVSALSACQKEIGSGYLSA-FPTE-----QFDRLEAL---IPV-WA-----PYYTI-HKILAGLLDQYTY 261 (872)
Q Consensus 198 D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a-~~~~-----~f~~~~~l---~~~-W~-----pyy~~-HkI~aGLld~y~~ 261 (872)
-+.+++.+..-.|.|.+|+. .+|.+-. .... .+.+-|.. +.. |. |-... -..-|+|-.+++.
T Consensus 91 ~~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAalAaas~v 168 (441)
T 1ia6_A 91 TTKMLQQLKYFTDYFLKSHP--NSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAALTLMYLN 168 (441)
T ss_dssp HHHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHHHHHHHHh
Confidence 37888889999999999965 3332211 1110 11111221 111 10 11111 1223333334444
Q ss_pred cCC------hhHHHHHHHHHHHHHHHhhhhhhccccccccc--cccccccchHHHHHHHHHHcCCHHHHHHhhhcccccc
Q 002872 262 ADN------AEALRMTTWMVEYFYNRVQNVIKKYSIERHWQ--TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCF 333 (872)
Q Consensus 262 tG~------~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~--~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~~~~ 333 (872)
-.+ ++.|+.|+++-+|..+.-+ . ........ -...| +..+-+|||+.|||++||+.|+.+....
T Consensus 169 fk~~D~~yA~~~L~~A~~~~~fa~~~~g-~---~~~~~~Y~ss~~~DE---~~WAAa~Ly~aTgd~~Yl~~a~~~~~~~- 240 (441)
T 1ia6_A 169 YKNIDSAYATKCLNAAKELYAMGKANQG-V---GNGQSFYQATSFGDD---LAWAATWLYTATNDSTYITDAEQFITLG- 240 (441)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHHSCS-C---CCCTTTSCCCCSHHH---HHHHHHHHHHHHCCTHHHHHHHHHTTC--
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHcCC-C---CCCCCCCCCCCchhH---HHHHHHHHHHHhCCHHHHHHHHHHHhhh-
Confidence 332 5788888888888765311 0 00000000 01122 3357789999999999999998763321
Q ss_pred cchhhccCCCCCCCcccCCcchhhHHHH-HHHHhCChHHHHHHHHHHHHHhccCeeeecCCCCCCCCCCCcccccCCCCC
Q 002872 334 LGLLALQADDISGFHSNTHIPIVIGSQM-RYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSN 412 (872)
Q Consensus 334 ~~~l~~~~D~l~g~HanthiP~~~G~a~-~Y~~TGD~~y~~aa~~fwd~V~~~h~Y~TGG~g~~E~f~~p~~L~~~l~~~ 412 (872)
...........+.|.=. .+..|... +.++++++.|++.++.+.+.....-.+--||..-.-.|+
T Consensus 241 -~~~~~~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WG------------ 305 (441)
T 1ia6_A 241 -NTMNENKMQDKWTMCWD--DMYVPAALRLAQITGKQIYKDAIEFNFNYWKTQVTTTPGGLKWLSNWG------------ 305 (441)
T ss_dssp ------CGGGCSSCSSSS--CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTT------------
T ss_pred -hhcccccccCCCcCCcc--chHHHHHHHHHhccCcHHHHHHHHHHHHHHHhhcccCCCCceecCCcc------------
Confidence 00000000000001000 12345444 467789999999888877655422222224433111111
Q ss_pred cccccchHHHHHHHHHHhcccCCchhHHHHHHHHhhhhcccCCCCCCCcEEEeccCC
Q 002872 413 TEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLA 469 (872)
Q Consensus 413 ~~ETCas~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~q~~~d~g~~~Y~~PL~ 469 (872)
..=-+.|+.+++..-..++++.+|.+...+.+ |=|||. +|. .+.|+...+
T Consensus 306 --s~~~~~~~a~l~~~~~~~~~~~~y~~~A~~ql-dYiLG~-NP~---~~SyvvG~G 355 (441)
T 1ia6_A 306 --VLRYAAAESMVMLVYCKQNPDQSLLDLAKKQV-DYILGD-NPA---NMSYIIGYG 355 (441)
T ss_dssp --HHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHH-HHHHTC-STT---CCCSBTTSS
T ss_pred --hHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH-HHhcCC-CCC---CceeEEecC
Confidence 11111344455555556778999999987766 888885 332 235555443
No 35
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=92.03 E-value=0.85 Score=53.02 Aligned_cols=191 Identities=18% Similarity=0.146 Sum_probs=104.5
Q ss_pred HhcCChHHHHHHHHHHHHHHHHH-hhcCCcceecCCchhhhhhhhc-----CCCccccchHHHHHHHHHHHHHHcC--Ch
Q 002872 194 ASTHNESLKEKMSAVVSALSACQ-KEIGSGYLSAFPTEQFDRLEAL-----IPVWAPYYTIHKILAGLLDQYTYAD--NA 265 (872)
Q Consensus 194 a~t~D~~L~~k~d~~Vd~L~~~Q-~~~~dGYL~a~~~~~f~~~~~l-----~~~W~pyy~~HkI~aGLld~y~~tG--~~ 265 (872)
..|+|+.+.+++.++.+.|.+.| . .+|-++.+-...-..|... ...=-.|| .-|+.+|..+| ++
T Consensus 249 ~LTGd~~Y~~~a~r~~~~l~~~~~~--~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~Y------EYLlK~~il~g~~d~ 320 (538)
T 1x9d_A 249 RLTGDKKFQEAVEKVTQHIHGLSGK--KDGLVPMFINTHSGLFTHLGVFTLGARADSYY------EYLLKQWIQGGKQET 320 (538)
T ss_dssp HHHCCTHHHHHHHHHHHHHHTCSCC--BTTBCCSEEETTTCCEESTTEECSSTTTHHHH------HHHHHHHHHTTSCCH
T ss_pred HHhCCcHHHHHHHHHHHHHHhcccC--CCCCcceEEeCCCCCccCCcceeecCCccHHH------HHHHHHHHHcCCchH
Confidence 57999999999999999999888 4 5665554321100001100 00001344 34678899998 57
Q ss_pred hHHHHHHHHHHHHHHHhhhhh--hcc------c---cccccccccccccchHHHHHHHHHHcCCHHHHHHhhhccccc--
Q 002872 266 EALRMTTWMVEYFYNRVQNVI--KKY------S---IERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPC-- 332 (872)
Q Consensus 266 ~aL~va~~~ad~~~~~~~~~~--~~~------~---~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~~~-- 332 (872)
+.+++-....+=+.+.+.... ..+ . ......-+.|-.|||- +|. -..-.+++|+++|+.+.+.|
T Consensus 321 ~y~~my~~a~~~i~~~L~~~~~~~~~~~v~~~~~g~~~~~~~hL~cF~gG~~-aLg--g~~~~~~~~l~~a~~L~~tC~~ 397 (538)
T 1x9d_A 321 QLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTL-ALG--VYHGLPASHMELAQELMETCYQ 397 (538)
T ss_dssp HHHHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEEECEEEGGGGHHHHHH-HHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCceEEEeccCCccCcccchHhhhhhhHH-Hhc--CcccCcHHHHHHHHHHHHHHHH
Confidence 777776666666655431100 000 0 0000123456667763 222 12345788999998764322
Q ss_pred -------ccchhhccCCCC-----CCC---cc---cCCcc-hhhHHHHHHHHhCChHHHHHHHHHHHHHhccCeeeecCC
Q 002872 333 -------FLGLLALQADDI-----SGF---HS---NTHIP-IVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGT 393 (872)
Q Consensus 333 -------~~~~l~~~~D~l-----~g~---Ha---nthiP-~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~Y~TGG~ 393 (872)
-+.|....-+.- ... .. +---| .++..-.+|++|||+.|++.+...++.+.++=-...||.
T Consensus 398 ~Y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~y~LRPE~IES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~Ggy 477 (538)
T 1x9d_A 398 MNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGY 477 (538)
T ss_dssp HHHTSTTSCCCSEEECCSSCCTTCCSCBCCGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBCTTSCB
T ss_pred HHHhcccCCCceEEEeccCCCccccceeeeccCcccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccccCCc
Confidence 122222111100 000 00 11223 357778889999999999999988888875333334446
Q ss_pred CC
Q 002872 394 SV 395 (872)
Q Consensus 394 g~ 395 (872)
++
T Consensus 478 a~ 479 (538)
T 1x9d_A 478 SS 479 (538)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 36
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=91.79 E-value=0.57 Score=52.60 Aligned_cols=129 Identities=13% Similarity=0.048 Sum_probs=82.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHH-HHHHHHHHHHHcC
Q 002872 185 YLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHK-ILAGLLDQYTYAD 263 (872)
Q Consensus 185 yLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~Hk-I~aGLld~y~~tG 263 (872)
.+-++..++..++|+++++.+...++.+.+.|. ++|. +|...- +....-.-||.+=- |...++.+++.++
T Consensus 236 I~~~Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~--~~g~---wp~~~~----~~~~~~~~wChG~~Gi~~~l~~~~~~~~ 306 (411)
T 3e6u_A 236 IYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKF--PSGN---YPPCIG----DNRDLLVHWCHGAPGVIYMLIQAYKVFR 306 (411)
T ss_dssp HHHHHTCGGGCCCHHHHHHTHHHHHHHHHHTCC--TTSC---CCSBTT----CCCCCCCSSSSSHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhcChHHHHHHHHHHHHHHHHhhc--cCCC---CCCCCC----cccCccccccCCcHHHHHHHHHHHHHcC
Confidence 334444445678899999999999999999887 6664 332110 01111111222211 4445678889999
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHHcCCHHHHHHhhhccc
Q 002872 264 NAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDK 330 (872)
Q Consensus 264 ~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~ 330 (872)
+++.++.+.+.++.+.++ . ....... .-|.- -|.-+.|.++|+.|||++|++.|..|-.
T Consensus 307 ~~~~~~~a~~~~~~~~~~--g----~~~~~~~-lChG~-aG~~~~ll~~~~~t~~~~~~~~A~~~~~ 365 (411)
T 3e6u_A 307 EEKYLCDAYQCADVIWQY--G----LLKKGYG-LCHGS-AGNAYAFLTLYNLTQDMKYLYRACKFAE 365 (411)
T ss_dssp CHHHHHHHHHHHHHHHHH--C----SBTTCSC-STTSH-HHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhc--C----ccCCCCc-eecCh-HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999888776542 1 1000110 11111 1677899999999999999999998854
No 37
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=91.56 E-value=1 Score=51.96 Aligned_cols=187 Identities=14% Similarity=0.005 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHcCCh------------hHHHHHHHHHHHHHHHhhhhhhccccc--------ccc---ccccccccchHH
Q 002872 251 ILAGLLDQYTYADNA------------EALRMTTWMVEYFYNRVQNVIKKYSIE--------RHW---QTLNEEAGGMND 307 (872)
Q Consensus 251 I~aGLld~y~~tG~~------------~aL~va~~~ad~~~~~~~~~~~~~~~~--------~~~---~~l~~E~GGmne 307 (872)
++-|||.+|..+|++ ..|+.|..+||.+..-|.. ..+.+.. ..+ ...-.|.|.+..
T Consensus 105 ~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdT-ptgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~L 183 (503)
T 1hcu_A 105 YLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTT-PSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVL 183 (503)
T ss_dssp HHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCS-SSSCCCSEEECSSSCEECCCSEEEHHHHTTSHH
T ss_pred hHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcC-CCCCCcceeecccCCCCCCCCccccccccceee
Confidence 678999999999984 8999999999988765531 1111110 011 112246677777
Q ss_pred HHHHHHHHcCCHHHHHHhhhcccccccchhh---ccCCCCCCCcccCCc------chhhH---------HHHHHHHhCCh
Q 002872 308 VLYKLFCITQDPKHLMLAHLFDKPCFLGLLA---LQADDISGFHSNTHI------PIVIG---------SQMRYEVTGDQ 369 (872)
Q Consensus 308 aL~~LY~~TGd~ryL~lA~~F~~~~~~~~l~---~~~D~l~g~Hanthi------P~~~G---------~a~~Y~~TGD~ 369 (872)
=+..|-++|||++|.+.|++..+. ++... ...+.|-+.+-|.+- -+-+| ..+.|.++|+.
T Consensus 184 EF~~LS~lTGd~~Y~~~a~~~~~~--l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~ 261 (503)
T 1hcu_A 184 EWTRLSDLTGNPQYAQLAQKGESY--LLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLIKMYLYDPVA 261 (503)
T ss_dssp HHHHHHHHHSCTHHHHHHHHHHHH--HHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHHHHHHHHCTTT
T ss_pred ehHHHHHHhCChHHHHHHHHHHHH--HHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHHHHHHHHHcCCc
Confidence 889999999999999999886321 11000 001111111111110 01122 46778889875
Q ss_pred --HHHHHHHHHHHHHhccCeeeecCCCCCCCCCCCccccc-C-CCCCcccccchHHHHHHHHHHhcccCCchhHHHHHHH
Q 002872 370 --LHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLAS-N-LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS 445 (872)
Q Consensus 370 --~y~~aa~~fwd~V~~~h~Y~TGG~g~~E~f~~p~~L~~-~-l~~~~~ETCas~nmlkl~~~Lf~~tgd~~YaD~~ERa 445 (872)
.|++.=....+.|.+ |+.-.-....+=.|... +.+ . .+....=+|=.-+|+-|.-.++. ..+|++..++.
T Consensus 262 ~~~y~~m~~~a~~~i~~-~l~~~~~~~~~~~~v~~--~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~L 335 (503)
T 1hcu_A 262 FAHYKDRWVLGADSTIG-HLGSHPSTRKDLTFLSS--YNGQSTSPNSGHLASFGGGNFILGGILLN---EQKYIDFGIKL 335 (503)
T ss_dssp THHHHHHHHHHHHHHHH-HTEECBTTCTTCCEECE--EETTEEESEEEGGGGGHHHHHHHHHHHHT---CHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH-HhccCCCCCCCceEEEe--ccCCccccccchhhhhhhHHHHhcCcccc---cHHHHHHHHHH
Confidence 677666666666643 33321100000001100 000 0 12335568999999999987764 45677766654
Q ss_pred H
Q 002872 446 L 446 (872)
Q Consensus 446 L 446 (872)
.
T Consensus 336 ~ 336 (503)
T 1hcu_A 336 A 336 (503)
T ss_dssp H
T ss_pred H
Confidence 3
No 38
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=91.38 E-value=8.4 Score=45.53 Aligned_cols=173 Identities=12% Similarity=0.133 Sum_probs=88.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcceec-CCc-----hhhhhhhhcCCCccccc---------hH-HHHHHHHHHHHHH
Q 002872 198 NESLKEKMSAVVSALSACQKEIGSGYLSA-FPT-----EQFDRLEALIPVWAPYY---------TI-HKILAGLLDQYTY 261 (872)
Q Consensus 198 D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a-~~~-----~~f~~~~~l~~~W~pyy---------~~-HkI~aGLld~y~~ 261 (872)
-+.+++.+..-.|.|.+|+. .+|.|-. ... ..+.+-|..... -|-| .. -..-|+|-++++.
T Consensus 90 ~~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~~w~~pe~~~~~-r~~y~v~~~~pgsd~a~e~AAAlAaAS~v 166 (614)
T 1g87_A 90 TKYIMDGIKWANDYFIKCNP--TPGVYYYQVGDGGKDHSWWGPAEVMQME-RPSFKVDASKPGSAVCASTAASLASAAVV 166 (614)
T ss_dssp HHHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHHTCCSCGGGCCSC-CCEEEECSSSCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcc--CCCcEEEEecCCCcCccccCCcccCCCC-CcceEecCCCCccHHHHHHHHHHHHHHHh
Confidence 47888999999999999965 3333221 100 011122221100 1222 11 1223333334444
Q ss_pred cCC------hhHHHHHHHHHHHHHHHhhhhhhcccc-cccccc--ccccccchHHHHHHHHHHcCCHHHHHHhhhccccc
Q 002872 262 ADN------AEALRMTTWMVEYFYNRVQNVIKKYSI-ERHWQT--LNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPC 332 (872)
Q Consensus 262 tG~------~~aL~va~~~ad~~~~~~~~~~~~~~~-~~~~~~--l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~~~ 332 (872)
-.+ ++.|+.|+++-+|..+.-+.. . .+. ...... ...| +..+-+|||+.|||++||+.|+.+...
T Consensus 167 fk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~-~-~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~- 240 (614)
T 1g87_A 167 FKSSDPTYAEKCISHAKNLFDMADKAKSDA-G-YTAASGYYSSSSFYDD---LSWAAVWLYLATNDSTYLDKAESYVPN- 240 (614)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHHHCCCT-T-CCTTTTTSCCSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHTGGG-
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHcCCCC-C-CCcCcCCcCCCCchhH---HHHHHHHHHHHhCCHHHHHHHHHHHHh-
Confidence 332 578888998888886542211 0 000 000000 0112 235778999999999999999875432
Q ss_pred ccchhhccCC--CCCCCcccCCcchhhHHHHH-HHHhCChHHHHHHHHHHHHHh
Q 002872 333 FLGLLALQAD--DISGFHSNTHIPIVIGSQMR-YEVTGDQLHKTISMFFMDIVN 383 (872)
Q Consensus 333 ~~~~l~~~~D--~l~g~HanthiP~~~G~a~~-Y~~TGD~~y~~aa~~fwd~V~ 383 (872)
+ .. ..+.. ...+.+.=. .+..|+..+ .++++++.|++.++.+.+...
T Consensus 241 ~-~~-~~~~~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~ 290 (614)
T 1g87_A 241 W-GK-EQQTDIIAYKWGQCWD--DVHYGAELLLAKLTNKQLYKDSIEMNLDFWT 290 (614)
T ss_dssp S-CB-CTTSSSBCCSSCCBTT--BCHHHHHHHHHHHHCCHHHHHHHHHHHHHHT
T ss_pred h-cc-ccccccccccCCcCcc--chHHHHHHHHHhccCcHHHHHHHHHHHHHhh
Confidence 1 10 00000 000111000 123565554 788999999999998887654
No 39
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=91.28 E-value=1.6 Score=50.16 Aligned_cols=187 Identities=11% Similarity=0.013 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHc-CC-----------hhHHHHHHHHHHHHHHHhhhhhhcccccc-------cc---ccccccccchHHH
Q 002872 251 ILAGLLDQYTYA-DN-----------AEALRMTTWMVEYFYNRVQNVIKKYSIER-------HW---QTLNEEAGGMNDV 308 (872)
Q Consensus 251 I~aGLld~y~~t-G~-----------~~aL~va~~~ad~~~~~~~~~~~~~~~~~-------~~---~~l~~E~GGmnea 308 (872)
++-|||.+|..+ |+ +..|+.|..+||.+..-|.. ..+.+..+ .+ ...-.|.|.+..=
T Consensus 92 ~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~T-ptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LE 170 (475)
T 2ri9_A 92 YLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDT-PSGVPYNNINITSHGNDGATTNGLAVTGTLVLE 170 (475)
T ss_dssp HHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCS-SSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHH
T ss_pred hHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcC-CCCCCCceeecccCCCcCCCccchhccccceee
Confidence 678999999999 87 68999999999988765531 11111110 01 1122466777778
Q ss_pred HHHHHHHcCCHHHHHHhhhcccccccchhh----ccCCCCCCCcc--------cCCcchh-------hHHHHHHHHhCCh
Q 002872 309 LYKLFCITQDPKHLMLAHLFDKPCFLGLLA----LQADDISGFHS--------NTHIPIV-------IGSQMRYEVTGDQ 369 (872)
Q Consensus 309 L~~LY~~TGd~ryL~lA~~F~~~~~~~~l~----~~~D~l~g~Ha--------nthiP~~-------~G~a~~Y~~TGD~ 369 (872)
+..|-++|||++|.+.|++..+. ++... ...+.|-+.+- ..++-+- +=..+.|.++|+.
T Consensus 171 F~~LS~lTGd~~Y~~~a~~~~~~--l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~ 248 (475)
T 2ri9_A 171 WTRLSDLTGDEEYAKLSQKAESY--LLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKR 248 (475)
T ss_dssp HHHHHHHHSCTHHHHHHHHHHHH--HHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHH--HHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHHHHHHHcCCc
Confidence 88999999999999999886321 11000 00111211111 1111111 1146778889875
Q ss_pred --HHHHHHHHHHHHHhccCeeeecCCCCCCCCCCCccccc-C-CCCCcccccchHHHHHHHHHHhcccCCchhHHHHHHH
Q 002872 370 --LHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLAS-N-LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS 445 (872)
Q Consensus 370 --~y~~aa~~fwd~V~~~h~Y~TGG~g~~E~f~~p~~L~~-~-l~~~~~ETCas~nmlkl~~~Lf~~tgd~~YaD~~ERa 445 (872)
.|++.=....+.|.+ |+.-.-....+=.|... ..+ . .+....=+|=.-+|+-+.-.++. ..+|++..++.
T Consensus 249 ~~~~~~m~~~a~~~i~~-~l~~~~~~~~~~~~v~~--~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~l 322 (475)
T 2ri9_A 249 FETYKDRWVLAAESTIK-HLKSHPKSRPDLTFLSS--YSNRNYDLSSQHLTCFDGGSFLLGGTVLD---RQDFIDFGLEL 322 (475)
T ss_dssp THHHHHHHHHHHHHHHH-HTEECCSSCTTCCEECE--EETTEEECEEETGGGGHHHHHHHHHHHHT---CHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH-HhccCCCCCCCceEEEe--ccCCccccccchHHHhHHHHHHhcccccc---cHHHHHHHHHH
Confidence 677666666666643 33321100000001000 000 0 12334568999999999987764 45677766654
Q ss_pred H
Q 002872 446 L 446 (872)
Q Consensus 446 L 446 (872)
.
T Consensus 323 ~ 323 (475)
T 2ri9_A 323 V 323 (475)
T ss_dssp H
T ss_pred H
Confidence 4
No 40
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=90.90 E-value=1.2 Score=51.11 Aligned_cols=192 Identities=16% Similarity=0.117 Sum_probs=104.7
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHhh---cCCcceecCCchhhhhhhhcCCCc----cccchHHHHHHHHHHHHHHcCCh-
Q 002872 194 ASTHNESLKEKMSAVVSALSACQKE---IGSGYLSAFPTEQFDRLEALIPVW----APYYTIHKILAGLLDQYTYADNA- 265 (872)
Q Consensus 194 a~t~D~~L~~k~d~~Vd~L~~~Q~~---~~dGYL~a~~~~~f~~~~~l~~~W----~pyy~~HkI~aGLld~y~~tG~~- 265 (872)
..|+|+++.+++.++.+.|.+.|.+ ..+|-++.+-...-..|....-.+ -.|| .-|+.+|..+|+.
T Consensus 176 ~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~~ 249 (475)
T 2ri9_A 176 DLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFY------EYLIKMYVYDPKRF 249 (475)
T ss_dssp HHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHH------HHHHHHHHHCTTTT
T ss_pred HHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHH------HHHHHHHHHcCCch
Confidence 5799999999999999999987710 134554443111000111100001 1344 3467889999976
Q ss_pred -hHHHHHHHHHHHHHHHhhhhh---hccc---------cccccccccccccchHHHHHHHHHHcCCHHHHHHhhhccccc
Q 002872 266 -EALRMTTWMVEYFYNRVQNVI---KKYS---------IERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPC 332 (872)
Q Consensus 266 -~aL~va~~~ad~~~~~~~~~~---~~~~---------~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~~~ 332 (872)
+.+++-....+=+.+.+.... +.+. ......-+.|-.|||- +|.- .+-++++|+++|+.+.+.|
T Consensus 250 ~~~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~-aLgg--~~~~~~~~~~~a~~l~~tC 326 (475)
T 2ri9_A 250 ETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSF-LLGG--TVLDRQDFIDFGLELVDGC 326 (475)
T ss_dssp HHHHHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHH-HHHH--HHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHH-Hhcc--cccccHHHHHHHHHHHHHH
Confidence 566666555555544432110 0000 0000122556677773 3321 2346789999998765432
Q ss_pred c---------cchhhccCCC---C---------CCCc----ccCCcc-hhhHHHHHHHHhCChHHHHHHHHHHHHHhccC
Q 002872 333 F---------LGLLALQADD---I---------SGFH----SNTHIP-IVIGSQMRYEVTGDQLHKTISMFFMDIVNSSH 386 (872)
Q Consensus 333 ~---------~~~l~~~~D~---l---------~g~H----anthiP-~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h 386 (872)
+ +.|....-+. . .++. .+-.-| .++..--+|++|||+.|++.+...++.+.+ +
T Consensus 327 ~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yr~~gw~~f~ai~k-~ 405 (475)
T 2ri9_A 327 EATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAINS-T 405 (475)
T ss_dssp HHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHhcccCCCCcEEEeecCcccccccccccCCCceecccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-H
Confidence 1 2222211100 0 0110 022234 457778889999999999999988888864 5
Q ss_pred eeeecCCCC
Q 002872 387 TYATGGTSV 395 (872)
Q Consensus 387 ~Y~TGG~g~ 395 (872)
.-+-.|.++
T Consensus 406 ~rt~~G~a~ 414 (475)
T 2ri9_A 406 CRTDSGFAA 414 (475)
T ss_dssp TBCSSSBCC
T ss_pred HccccCCcc
Confidence 545556554
No 41
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=90.83 E-value=6.4 Score=46.43 Aligned_cols=175 Identities=13% Similarity=0.030 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcceecC-Cc-----hhhhhhhhcCCCccccch---------H-HHHHHHHHHHHHH
Q 002872 198 NESLKEKMSAVVSALSACQKEIGSGYLSAF-PT-----EQFDRLEALIPVWAPYYT---------I-HKILAGLLDQYTY 261 (872)
Q Consensus 198 D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~-~~-----~~f~~~~~l~~~W~pyy~---------~-HkI~aGLld~y~~ 261 (872)
-+.+++.+..-.|.|.+||. .+|.|-.- .. ..+.+.|... .--|-|. . -..-|+|-++++.
T Consensus 90 ~~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~~w~~pe~m~-~~r~~y~~~~~~pgsd~a~~~AAAlAaAS~v 166 (605)
T 1tf4_A 90 MPYLKDNLRWVNDYFIKAHP--SPNVLYVQVGDGDADHKWWGPAEVMP-MERPSFKVDPSCPGSDVAAETAAAMAASSIV 166 (605)
T ss_dssp HHHHHHHHHHHHHHHHHTCS--BTTBEEEEESCHHHHHHCCSCGGGCC-SCCCEEEEBTTBCCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcc--CCCeEEEEeCCCCcCccccCChhhCC-CCCceeEecCCCCcchHHHHHHHHHHHHHhh
Confidence 37788889999999999997 44432211 00 0111222111 0112221 1 1233344334444
Q ss_pred cCC------hhHHHHHHHHHHHHHHHhhhhhhcccccccc---ccccccccchHHHHHHHHHHcCCHHHHHHhhhccccc
Q 002872 262 ADN------AEALRMTTWMVEYFYNRVQNVIKKYSIERHW---QTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPC 332 (872)
Q Consensus 262 tG~------~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~---~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~~~ 332 (872)
-.+ ++.|+.|+++-+|..+.-+......+..... .-...| +..+-+|||+.|||++||+.|+.+...
T Consensus 167 fk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~~~~~Y~s~s~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~- 242 (605)
T 1tf4_A 167 FADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDE---LVWGAYWLYKATGDDSYLAKAEYEYDF- 242 (605)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCSSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHHGGG-
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCccccccCCCCCchH---HHHHHHHHHHHhCCHHHHHHHHHHHHh-
Confidence 332 5788888888888865311100000000000 000112 335778999999999999999875321
Q ss_pred ccchhhccCC--CCCCCcccCCcchhhHHHH-HHHHhCChHHHHHHHHHHHHHh
Q 002872 333 FLGLLALQAD--DISGFHSNTHIPIVIGSQM-RYEVTGDQLHKTISMFFMDIVN 383 (872)
Q Consensus 333 ~~~~l~~~~D--~l~g~HanthiP~~~G~a~-~Y~~TGD~~y~~aa~~fwd~V~ 383 (872)
+ .. ....+ ...+.|.=. .+..|... +.++++++.|++.++.+.+...
T Consensus 243 ~-~~-~~~~~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~y~~~a~~~~~~~~ 292 (605)
T 1tf4_A 243 L-ST-EQQTDLRSYRWTIAWD--DKSYGTYVLLAKETGKQKYIDDANRWLDYWT 292 (605)
T ss_dssp S-CB-CTTSSCBCCSSCCSSS--CCHHHHHHHHHHHHCCHHHHHHHHHHHHHTT
T ss_pred c-cc-cccccccccccccccc--chHHHHHHHHHhccChHHHHHHHHHHHHHHh
Confidence 1 00 00000 000111100 12345444 3678999999999998888654
No 42
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=90.31 E-value=3.7 Score=45.39 Aligned_cols=181 Identities=9% Similarity=-0.111 Sum_probs=95.1
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCC---cceecCCchhh-----hhhhh--cCCCccccchHHHHHHHH
Q 002872 186 LSASALMWASTHNESLKEKMSAVVSALSACQKEIGS---GYLSAFPTEQF-----DRLEA--LIPVWAPYYTIHKILAGL 255 (872)
Q Consensus 186 LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~d---GYL~a~~~~~f-----~~~~~--l~~~W~pyy~~HkI~aGL 255 (872)
++++..++....|+...+.+..+++.|.+.++ .+. ||.... +..+ ..+.. ..-.++.=.++ |+.-|
T Consensus 140 ~aGi~~~Ll~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~G~aHG~aG--i~~~L 215 (409)
T 2g0d_A 140 LSGILSYLLLINDEQYDDLKILIINFLSNLTK-ENNGLISLYIKS-ENQMSQSESEMYPLGCLNMGLAHGLAG--VGCIL 215 (409)
T ss_dssp HHHHHHHHTTCCCGGGHHHHHHHHHHHHHTTS-CCSSSCTTCBCG-GGSSSHHHHHHCTTCBEECCTTTSHHH--HHHHH
T ss_pred HHHHHHHHHHccCchhHHHHHHHHHHHHHHHh-cCCCCCceeecC-CccccchhhhcCCCCCccCCchhhHHH--HHHHH
Confidence 45555555555678888888889998888654 122 232211 0000 00110 00111111122 34333
Q ss_pred HHHHHHcC--ChhHHHHHHHHHHHHHHHhhh-hhhc-ccc--------------cccccccccccc--chHHHHHHHHHH
Q 002872 256 LDQYTYAD--NAEALRMTTWMVEYFYNRVQN-VIKK-YSI--------------ERHWQTLNEEAG--GMNDVLYKLFCI 315 (872)
Q Consensus 256 ld~y~~tG--~~~aL~va~~~ad~~~~~~~~-~~~~-~~~--------------~~~~~~l~~E~G--GmneaL~~LY~~ 315 (872)
..+| .+| +++.++.+.+.++|+.+.... .-.. ++. +......+--+| |+-.++..+|+.
T Consensus 216 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~ 294 (409)
T 2g0d_A 216 AYAH-IKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLA 294 (409)
T ss_dssp HHHH-HHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHH
T ss_pred HHHH-HhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 3344 455 789999999999999653211 0000 000 000000111244 788999999999
Q ss_pred cCCHHHHHHhhhcccccccchhhccCCCCCCCcccCCcch--hhHHHHHHHHhCChHHHHHHHH
Q 002872 316 TQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPI--VIGSQMRYEVTGDQLHKTISMF 377 (872)
Q Consensus 316 TGd~ryL~lA~~F~~~~~~~~l~~~~D~l~g~HanthiP~--~~G~a~~Y~~TGD~~y~~aa~~ 377 (872)
++|++|++.|+...+..+-. ......+.--|... +.-....|+.|+|+.|++.+..
T Consensus 295 ~~d~~~~~~a~~~~~~~~~~------~~~~~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~~a~~ 352 (409)
T 2g0d_A 295 LDNDYFVDKAEKILESAMQR------KLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEE 352 (409)
T ss_dssp TTCHHHHHHHHHHHHHHHHH------CTTCCSCCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHh------ccCCCCCCCCChHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999998764321110 00001112233332 1224567999999999887776
No 43
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=90.25 E-value=14 Score=42.25 Aligned_cols=243 Identities=13% Similarity=0.135 Sum_probs=116.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcceec-CCch-----hhhhhhhc---CCCcc-----ccchHH-HHHHHHHHHHHHc
Q 002872 198 NESLKEKMSAVVSALSACQKEIGSGYLSA-FPTE-----QFDRLEAL---IPVWA-----PYYTIH-KILAGLLDQYTYA 262 (872)
Q Consensus 198 D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a-~~~~-----~f~~~~~l---~~~W~-----pyy~~H-kI~aGLld~y~~t 262 (872)
-+.+++.+..-.|.|.+|+. .+|-+-. .... .|.+-|.. +..+. |-...- ..-|+|-++++.-
T Consensus 111 ~~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AAAlAaAS~vf 188 (466)
T 2xfg_A 111 YNHILNNIKWACDYFIKCHP--EKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIF 188 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTCS--BTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHHHHHHHHHHhc
Confidence 37888999999999999965 3332221 1110 11111111 11110 111111 2233333344443
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhhhhccccc-ccc---ccccccccchHHHHHHHHHHcCCHHHHHHhhhccccc
Q 002872 263 DN------AEALRMTTWMVEYFYNRVQNVIKKYSIE-RHW---QTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPC 332 (872)
Q Consensus 263 G~------~~aL~va~~~ad~~~~~~~~~~~~~~~~-~~~---~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~~~ 332 (872)
.+ ++.|+.|+++-+|..+.-+.. . .+.. ... .-...| +..+-+|||+.|||++||+.|+.+...
T Consensus 189 k~~D~~yA~~~L~~Ak~l~~fA~~~~~~~-~-~~~~~~~Y~s~s~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~- 262 (466)
T 2xfg_A 189 KKVDGEYSKECLKHAKELFEFADTTKSDD-G-YTAANGFYNSWSGFYDE---LSWAAVWLYLATNDSSYLDKAESYSDK- 262 (466)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHCCCT-T-CCTTTTTSCCSSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHTTTT-
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhcCCcC-C-CCccccccCCCCCCchH---HHHHHHHHHHHhCCHHHHHHHHHHHHH-
Confidence 32 578888999888886542211 0 0100 000 001122 335778999999999999999875321
Q ss_pred ccchhhccCC--CCCCCcccCCcchhhHHHH-HHHHhCCh-HHHHHHHHHHHHHhccCeeeecCCCCCCCCCCCcccccC
Q 002872 333 FLGLLALQAD--DISGFHSNTHIPIVIGSQM-RYEVTGDQ-LHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASN 408 (872)
Q Consensus 333 ~~~~l~~~~D--~l~g~HanthiP~~~G~a~-~Y~~TGD~-~y~~aa~~fwd~V~~~h~Y~TGG~g~~E~f~~p~~L~~~ 408 (872)
+ .. ..+.. ...+.+.=. .+..|... +.++++++ .|++.++.+.+..... ..+..-. ..|+.|.-
T Consensus 263 ~-~~-~~~~~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~tp~Gl~~- 330 (466)
T 2xfg_A 263 W-GY-EPQTNIPKYKWAQCWD--DVTYGTYLLLARIKNDNGKYKEAIERHLDWWTTG------YNGERIT-YTPKGLAW- 330 (466)
T ss_dssp S-CB-STTSSSBCCSSCCBTT--BCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC------BTTBCCC-BCTTSCBC-
T ss_pred h-cc-ccccccccccCcCCcc--hhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhc------cCCCccc-cCCccccc-
Confidence 1 00 00000 000111001 12456555 36778887 8988888877765421 0000000 01111110
Q ss_pred CCCCcccccc--hHHHHHHHHHHhcccC-----CchhHHHHHHHHhhhhcccCCCCCCCcEEEeccCCC
Q 002872 409 LDSNTEESCT--TYNMLKVSRHLFRWTK-----EIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAP 470 (872)
Q Consensus 409 l~~~~~ETCa--s~nmlkl~~~Lf~~tg-----d~~YaD~~ERaLyN~iLa~q~~~d~g~~~Y~~PL~~ 470 (872)
+ . .--++ +.|..+++..-..+++ +.+|.+...+.+ |=|||.- .+-|+...+.
T Consensus 331 ~-~--~Wgs~~~~~n~afl~~~y~~~~~~~~~~~~~y~~~A~~qi-dYiLG~N------~~SyvvG~G~ 389 (466)
T 2xfg_A 331 L-D--QWGSLRYATTTAFLACVYSDWENGDKEKAKTYLEFARSQA-DYALGST------GRSFVVGFGE 389 (466)
T ss_dssp C-C--SSSHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHH-HHHHTTT------SSCCBTTSSS
T ss_pred c-C--CCCchHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHhH-HhhcCCC------CcceEeccCC
Confidence 0 0 00111 2234444444445556 778888887655 8888853 1356655543
No 44
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=89.97 E-value=0.86 Score=52.74 Aligned_cols=191 Identities=14% Similarity=0.091 Sum_probs=104.4
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHhh--cCCcceecCCchhhhhhhhcCCCc----cccchHHHHHHHHHHHHHHcCChhH
Q 002872 194 ASTHNESLKEKMSAVVSALSACQKE--IGSGYLSAFPTEQFDRLEALIPVW----APYYTIHKILAGLLDQYTYADNAEA 267 (872)
Q Consensus 194 a~t~D~~L~~k~d~~Vd~L~~~Q~~--~~dGYL~a~~~~~f~~~~~l~~~W----~pyy~~HkI~aGLld~y~~tG~~~a 267 (872)
..|+|+++.+++.++.+.|.+.|.. ..+|-++.+-...-..|....-.+ -.|| .-|+.+|..+++++.
T Consensus 187 ~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~Y------EYLlK~~il~~d~~y 260 (511)
T 1dl2_A 187 YLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFY------EYLLKQYLLTHETLY 260 (511)
T ss_dssp HHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHH------HHHHHHHHHHCCHHH
T ss_pred HHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHH------HHHHHHHHhcCCHHH
Confidence 4799999999999999999998821 156655544211000111100000 1344 336778888888888
Q ss_pred HHHHHHHHHHHHHHhhhhh--hc------cc------cccccccccccccchHHHHHHHHHH---------cCCHHHHHH
Q 002872 268 LRMTTWMVEYFYNRVQNVI--KK------YS------IERHWQTLNEEAGGMNDVLYKLFCI---------TQDPKHLML 324 (872)
Q Consensus 268 L~va~~~ad~~~~~~~~~~--~~------~~------~~~~~~~l~~E~GGmneaL~~LY~~---------TGd~ryL~l 324 (872)
+++-....+=+.+.+.... .. +. ......-+.|-.||| .+|.-.... ..+++|+++
T Consensus 261 ~~m~~~a~~~i~~~L~~~~~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~-~aLg~~~~~~~~~a~~~~~~~~~~~~~ 339 (511)
T 1dl2_A 261 YDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGL-LASGSTEGLSIHEARRRPFFSKSDWDL 339 (511)
T ss_dssp HHHHHHHHHHHHHHTEEECTTTCCEEECBBTTCTTSCCBCEEEGGGGGHHHH-HHHHHHTTCCHHHHTTSTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCCcEEEEEeecCCCCccccccchhhhchhHH-HHhccccCCChhhhhhcccccHHHHHH
Confidence 8887777776665542110 00 00 000012245666776 333321111 234589999
Q ss_pred hhhcccccc---------cchhhccCCCC------------CC--Cc----ccCCcc-hhhHHHHHHHHhCChHHHHHHH
Q 002872 325 AHLFDKPCF---------LGLLALQADDI------------SG--FH----SNTHIP-IVIGSQMRYEVTGDQLHKTISM 376 (872)
Q Consensus 325 A~~F~~~~~---------~~~l~~~~D~l------------~g--~H----anthiP-~~~G~a~~Y~~TGD~~y~~aa~ 376 (872)
|+.+.+.|+ +.|....-+.- .. .+ .+-.=| .++..-.+|++|||+.|++.+.
T Consensus 340 a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~~~~~d~~y~LRPE~iES~fylyR~TgD~~yre~gw 419 (511)
T 1dl2_A 340 AKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGA 419 (511)
T ss_dssp HHHHHHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSSSEEECGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccCCCceEEEeecCCccccccccccccceeeccCCcccCcCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 987743322 22221110000 00 00 122223 3577788899999999999999
Q ss_pred HHHHHHhccCeeeecC
Q 002872 377 FFMDIVNSSHTYATGG 392 (872)
Q Consensus 377 ~fwd~V~~~h~Y~TGG 392 (872)
..++.+.+ +.-+-.|
T Consensus 420 ~~f~ai~k-~~rt~~G 434 (511)
T 1dl2_A 420 EIATSFFE-NTCVDCN 434 (511)
T ss_dssp HHHHHHHH-HHEESTT
T ss_pred HHHHHHHH-HhccccC
Confidence 98888874 5544444
No 45
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=87.98 E-value=2.1 Score=49.46 Aligned_cols=192 Identities=16% Similarity=0.123 Sum_probs=104.6
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHh--hcCCcceecCCchhhhhhhh----cCCCccccchHHHHHHHHHHHHHHcCCh--
Q 002872 194 ASTHNESLKEKMSAVVSALSACQK--EIGSGYLSAFPTEQFDRLEA----LIPVWAPYYTIHKILAGLLDQYTYADNA-- 265 (872)
Q Consensus 194 a~t~D~~L~~k~d~~Vd~L~~~Q~--~~~dGYL~a~~~~~f~~~~~----l~~~W~pyy~~HkI~aGLld~y~~tG~~-- 265 (872)
..|+|+.+.+++.++.+.|.+.|. ...+|-++.+-...-..|.. +...=-.|| .-|+.+|..+|+.
T Consensus 190 ~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~~~ 263 (503)
T 1hcu_A 190 DLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFY------EYLIKMYLYDPVAFA 263 (503)
T ss_dssp HHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHH------HHHHHHHHHCTTTTH
T ss_pred HHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHH------HHHHHHHHHcCCchH
Confidence 579999999999999999998763 11455444331100001110 000001344 3467889999876
Q ss_pred hHHHHHHHHHHHHHHHhhhhh---hccc---------cccccccccccccchHHHHHHHHHHcCCHHHHHHhhhcccccc
Q 002872 266 EALRMTTWMVEYFYNRVQNVI---KKYS---------IERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCF 333 (872)
Q Consensus 266 ~aL~va~~~ad~~~~~~~~~~---~~~~---------~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~~~~~ 333 (872)
+.+++-....+=+.+.+.... +.+. ......-+.|-.|||- +|.- .+-++++|+++|+.+.+.|+
T Consensus 264 ~y~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~-aLgg--~~~~~~~~~~~a~~L~~tC~ 340 (503)
T 1hcu_A 264 HYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNF-ILGG--ILLNEQKYIDFGIKLASSYF 340 (503)
T ss_dssp HHHHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHH-HHHH--HHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHH-HhcC--cccccHHHHHHHHHHHHHHH
Confidence 566666655555554432110 0000 0000123556677773 3321 23467899999987654321
Q ss_pred ---------cchhhccCC--C-------C---------CCCc----ccCCcc-hhhHHHHHHHHhCChHHHHHHHHHHHH
Q 002872 334 ---------LGLLALQAD--D-------I---------SGFH----SNTHIP-IVIGSQMRYEVTGDQLHKTISMFFMDI 381 (872)
Q Consensus 334 ---------~~~l~~~~D--~-------l---------~g~H----anthiP-~~~G~a~~Y~~TGD~~y~~aa~~fwd~ 381 (872)
+.|....-+ . . .++. .+-.=| .++..--+|++|||+.|++.+...++.
T Consensus 341 ~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~if~a 420 (503)
T 1hcu_A 341 GTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPETLESLYYAYRVTGDSKWQDLAWEALSA 420 (503)
T ss_dssp HHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCHHHHHHHHHHHHHCBHHHHHHHHHHHHH
T ss_pred HHHHhCccCCCceEEEeecCccccccCCcccccccccCCCceeccccccCChHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 222211110 0 0 0110 012223 357777889999999999999988888
Q ss_pred HhccCeeeecCCCC
Q 002872 382 VNSSHTYATGGTSV 395 (872)
Q Consensus 382 V~~~h~Y~TGG~g~ 395 (872)
+.+ +.-+-.|.++
T Consensus 421 i~k-~~r~~~Gya~ 433 (503)
T 1hcu_A 421 IED-ACRAGSAYSS 433 (503)
T ss_dssp HHH-HHEETTEECC
T ss_pred HHH-HHhhccCCcc
Confidence 863 5555556554
No 46
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=85.15 E-value=62 Score=38.05 Aligned_cols=126 Identities=6% Similarity=-0.088 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCcc-------eecCC-chhh----hhhhhcC---CCccccchHH-HHHHHHHHHHHHc
Q 002872 199 ESLKEKMSAVVSALSACQKEIGSGY-------LSAFP-TEQF----DRLEALI---PVWAPYYTIH-KILAGLLDQYTYA 262 (872)
Q Consensus 199 ~~L~~k~d~~Vd~L~~~Q~~~~dGY-------L~a~~-~~~f----~~~~~l~---~~W~pyy~~H-kI~aGLld~y~~t 262 (872)
+.+++.+..-.|.|.+||. ++|+ ++--. ...| .+=++.. ....|-...- .+-|+|-++++.-
T Consensus 227 ~d~ldeikwg~D~llk~q~--~~g~~~~~~g~v~~~~~D~~w~g~~~~Pe~~~~~R~~~~p~t~~~~~~AAalAaas~vf 304 (609)
T 1ut9_A 227 PDILDEARWEIEFFKKMQV--TEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRYLRPVSTAATLNFAATLAQSARLW 304 (609)
T ss_dssp CHHHHHHHHHHHHHHHHBC--CTTTCGGGTTCEECEEEESSCCCSSCCGGGCCSBEEECCEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCCcceEEEEecCCCCCcccCCCCCChhhCCCceeecCCCcHHHHHHHHHHHHHHHhc
Confidence 6899999999999999998 7775 11100 0000 0001110 0111111111 1222333344443
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhhhhccc-c----cccccc--ccccccchHHHHHHHHHHcCCHHHHHHhhhcc
Q 002872 263 DN------AEALRMTTWMVEYFYNRVQNVIKKYS-I----ERHWQT--LNEEAGGMNDVLYKLFCITQDPKHLMLAHLFD 329 (872)
Q Consensus 263 G~------~~aL~va~~~ad~~~~~~~~~~~~~~-~----~~~~~~--l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~ 329 (872)
.+ ++.|+.|+++-+|..+.-.......+ . ...... ...| +..+-+|||+.|||+.||+.|+...
T Consensus 305 k~~d~~ya~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~ 381 (609)
T 1ut9_A 305 KDYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPGSGGPGGGPYNDDYVGDE---FYWAACELYVTTGKDEYKNYLMNSP 381 (609)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHCTTCCBCCCCSSSSCBSCCCCBSCCHHH---HHHHHHHHHHHHCCHHHHHHHHTST
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCcccccccccccCccCCCCCCCCCcccH---HHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 22 57888898888888653221100000 0 000000 1122 3357789999999999999998753
No 47
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=82.32 E-value=9.5 Score=42.06 Aligned_cols=132 Identities=11% Similarity=-0.029 Sum_probs=77.6
Q ss_pred HHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHhhcCCcceecCCc-h-hhhhh--------hhcCCCccccchHHHHHH
Q 002872 185 YLSASALMWAST-HNESLKEKMSAVVSALSACQKEIGSGYLSAFPT-E-QFDRL--------EALIPVWAPYYTIHKILA 253 (872)
Q Consensus 185 yLsA~A~~~a~t-~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~-~-~f~~~--------~~l~~~W~pyy~~HkI~a 253 (872)
.+..++.++... .|+.+.+.+...++.+.+.+...++|-. +|. . ..+.. ......|--=-.+ |..
T Consensus 211 i~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~--wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~G--i~~ 286 (409)
T 2g0d_A 211 VGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFL--WKDGLVADELKKEKVIREASFIRDAWCYGGPG--ISL 286 (409)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTC--CCSEECHHHHHHTSCCSCCSCCCCCSSSSHHH--HHH
T ss_pred HHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHhcCCCCCc--CCCccccHhhhcccccccCCCCCCcCCCCCHH--HHH
Confidence 334445544333 3899999999999999765442233321 121 0 00000 0011222111112 444
Q ss_pred HHHHHHHHcCChhHHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHHcCCHHHHHHhhhc
Q 002872 254 GLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLF 328 (872)
Q Consensus 254 GLld~y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F 328 (872)
.++.+|+.+++++.++.+.+.++.+.++-. .. ... ..-|.. -|+-++|.++|+.|+|++|++.|+.|
T Consensus 287 ~l~~~~~~~~d~~~~~~a~~~~~~~~~~~~-----~~-~~~-~LCHG~-aG~~~~l~~l~~~~~~~~~~~~a~~~ 353 (409)
T 2g0d_A 287 LYLYGGLALDNDYFVDKAEKILESAMQRKL-----GI-DSY-MICHGY-SGLIEICSLFKRLLNTKKFDSYMEEF 353 (409)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHCT-----TC-CSC-CTTTSH-HHHHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhcc-----CC-CCC-CCCChH-HHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence 566789999999999999999988875410 00 000 011121 26789999999999999999999875
No 48
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=81.91 E-value=6.3 Score=45.81 Aligned_cols=127 Identities=13% Similarity=0.065 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCcceec-CCchhh----hhhhhcC-CCcc-ccc--hHHHHHHHHHHHHHHcCC-----
Q 002872 199 ESLKEKMSAVVSALSACQKEIGSGYLSA-FPTEQF----DRLEALI-PVWA-PYY--TIHKILAGLLDQYTYADN----- 264 (872)
Q Consensus 199 ~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a-~~~~~f----~~~~~l~-~~W~-pyy--~~HkI~aGLld~y~~tG~----- 264 (872)
+.+.+.+..-+|.|.+||... +|.+-. .....| .+=++.. ..+. +.- .--.+-|+|-.+++.-.+
T Consensus 188 ~d~ldeikwg~D~llk~~~~~-~g~~y~~v~~~~w~g~~~~Pe~~~~~R~~~~~~t~~~~~~AAalA~as~vf~~~D~~y 266 (537)
T 3gzk_A 188 PPALEVAREEIAWLLTMQDPA-TGGVYHKVTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAALVYRPFDPAL 266 (537)
T ss_dssp CHHHHHHHHHHHHHHHTBCTT-TCCBBSEEECSSCCCTTCCGGGCCSCEEECCBCHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHHHHHhcccCC-CCeEEEEecCCCcCCCCcCcccCCCcceEeecCCcHHHHHHHHHHHHHHhhcccCHHH
Confidence 578889999999999999721 133211 000001 0001111 1110 000 112234445456777676
Q ss_pred -hhHHHHHHHHHHHHHHHhhhhhhc-ccc-ccccc--cccccccchHHHHHHHHHHcCCHHHHHHhhhcc
Q 002872 265 -AEALRMTTWMVEYFYNRVQNVIKK-YSI-ERHWQ--TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFD 329 (872)
Q Consensus 265 -~~aL~va~~~ad~~~~~~~~~~~~-~~~-~~~~~--~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~ 329 (872)
++.|+.|+++-+|..+.-...... ... ..... ....| +..+.+|||+.|||++||+.|+.+.
T Consensus 267 A~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~~De---l~wAA~~Ly~aTgd~~Yl~~a~~~~ 333 (537)
T 3gzk_A 267 SSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAELRDE---LLWASCALLRMTGDSAWARVCEPLL 333 (537)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCCHHH---HHHHHHHHHHHHCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCccchH---HHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 789999999999986532211000 000 00000 01122 4468899999999999999998653
No 49
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=76.74 E-value=20 Score=34.71 Aligned_cols=92 Identities=14% Similarity=0.150 Sum_probs=57.6
Q ss_pred ceEEEeecCCceeeeecCCC--CCccccceEEEEEecCCCCCccccccCCCCcccccCCCCCCCceEEeecCCceEEEec
Q 002872 685 TKFVLTNSNQSITMEKFPKS--GTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTD 762 (872)
Q Consensus 685 ~~~~~~~~~~~~~~~~~p~~--gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~p~~~v~~~~~~~~l~v~~ 762 (872)
..|..+..||.+++. .|.. +......-+|.+..- .++.|+|.... |.|++-..-. .| +.+
T Consensus 34 ~~y~~A~~~G~~t~~-~~~~~~~~~~~~~E~f~l~~~-------------~~~~v~LRs~~--GkYLs~~~~G-~v-~a~ 95 (155)
T 2yug_A 34 GAYIHALDNGLFTLG-APHREVDEGPSPPEQFTAVKL-------------SDSRIALKSGY--GKYLGINSDG-LV-VGR 95 (155)
T ss_dssp SCBEEECTTSCEEEC-CCCSSSSCCCCTTTCEEEEEC-------------SSSCEEEEETT--SCBEEECSSS-BE-EEC
T ss_pred CCEEEEEcCCcEEEc-cccccccCCCCCcceEEEEEC-------------CCCEEEEEeCC--CCEEEecCCC-cE-Eec
Confidence 356666666765553 2322 445555668887742 12246666543 8888864222 23 344
Q ss_pred CCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 002872 763 SFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 800 (872)
Q Consensus 763 ~~~~~~~s~f~~vpgl~g~~g~vsles~~~pg~~~~~~ 800 (872)
....++..+|.+++- + |.+.|.+. -|+||...
T Consensus 96 a~~~g~~E~F~l~~~-~---G~~aLra~--nG~yl~~~ 127 (155)
T 2yug_A 96 SDAIGPREQWEPVFQ-D---GKMALLAS--NSCFIRCN 127 (155)
T ss_dssp CSSCCTTTBEEEECS-T---TCCEEEET--TSCBEEEC
T ss_pred cCCCCCCCEEEEEEE-C---CEEEEEeC--CCCEEEEc
Confidence 455578899999986 3 57999993 49999864
No 50
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=76.59 E-value=4.1 Score=46.15 Aligned_cols=72 Identities=11% Similarity=0.022 Sum_probs=46.4
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHhhhhhhccccc--c--ccccccccccchHHHHHHHHHHcCCHHHHHHhhh
Q 002872 252 LAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIE--R--HWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHL 327 (872)
Q Consensus 252 ~aGLld~y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~--~--~~~~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~ 327 (872)
+..++-+|+..+++.+.++++.|+.-+. ++++ ...... . +......- -+-.+|.+||+.|++++||++|..
T Consensus 379 ll~~vra~~~s~D~~Lw~~~~~ma~~~~--lgdi-~~~~~~~~~~~~~~~~~sp--~lL~allEL~~atq~~~~l~lA~~ 453 (543)
T 2v8i_A 379 LISYARAYAIDNDPLLWKVARGIANDQG--LGDI-GTAPGKEVKVNMDTTNSDP--YALFALLDLYHASQVADYRKLAEK 453 (543)
T ss_dssp HHHHHHHHHHSCCHHHHHHHHHHHHHTT--CEEC-TTBTTBSCEECTTCCCCCH--HHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHhhCC--cccc-CCCcCcccccccCCCCcCH--HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3346789999999999999999988763 1111 110000 0 00000000 123689999999999999999986
Q ss_pred c
Q 002872 328 F 328 (872)
Q Consensus 328 F 328 (872)
.
T Consensus 454 ~ 454 (543)
T 2v8i_A 454 I 454 (543)
T ss_dssp H
T ss_pred H
Confidence 5
No 51
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=76.39 E-value=11 Score=44.29 Aligned_cols=122 Identities=16% Similarity=0.238 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHHhcC-------ChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHH
Q 002872 183 GHYLSASALMWASTH-------NESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGL 255 (872)
Q Consensus 183 GhyLsA~A~~~a~t~-------D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGL 255 (872)
|.=|.|+|++-|..= .+++.+.+....+.+.+.... |...-.....| -|| .+. |+
T Consensus 251 ~agl~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~~~~----y~~~g~~~~~D----------e~~---~~W-AA 312 (586)
T 3h7l_A 251 GGGVAIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEHNTQ----YLNDGEENIID----------EYC---ALL-AS 312 (586)
T ss_dssp THHHHHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHHHHH----HSTTSCCCHHH----------HHH---HHH-HH
T ss_pred cHHHHHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhcCcc----ccCCCCccchh----------HHH---HHH-HH
Confidence 333556666665543 457777777777777766441 21110111111 111 234 45
Q ss_pred HHHHHHcCChhHHHHHHHHHHHHHHHhhhhhhccccccccc-------c-ccccccchH-HHHHHHHHHcCCHHHHHHh
Q 002872 256 LDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQ-------T-LNEEAGGMN-DVLYKLFCITQDPKHLMLA 325 (872)
Q Consensus 256 ld~y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~-------~-l~~E~GGmn-eaL~~LY~~TGd~ryL~lA 325 (872)
+..|++||+++.|+-+...++.+..++... +. ..-.|. . .+....|+. .+|++|.++|+|+++.+-|
T Consensus 313 ~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~-~~--~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a 388 (586)
T 3h7l_A 313 VELFKATKETRYLEESRLWAQRLVARQMSD-EQ--IQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESV 388 (586)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHTTEECC-SS--CSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhccCC-cc--CCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHHH
Confidence 689999999999999999999887765321 00 001121 0 111223443 6899999999987444444
No 52
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=74.30 E-value=7.8 Score=46.01 Aligned_cols=125 Identities=10% Similarity=0.053 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCcceec-CCchhhhhhhhcCCCccccchH---H----HHHHHHHHHHHHcC------C
Q 002872 199 ESLKEKMSAVVSALSACQKEIGSGYLSA-FPTEQFDRLEALIPVWAPYYTI---H----KILAGLLDQYTYAD------N 264 (872)
Q Consensus 199 ~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a-~~~~~f~~~~~l~~~W~pyy~~---H----kI~aGLld~y~~tG------~ 264 (872)
+.+++.+..-.|.|.+||...++|.+.. .....++-+..-++.-.|.|.. . ..-|+|-++++.-. .
T Consensus 232 ~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~~~Pe~~~~~R~~~~~~s~~a~e~AAAlAaAS~vfk~~D~~yA 311 (639)
T 1clc_A 232 PDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGFIMPENEHDERFFVPWSSAATADFVAMTAMAARIFRPYDPQYA 311 (639)
T ss_dssp CHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCSCCGGGCCSCCEEEEECHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCCCCchhcCCCceEecCCcHHHHHHHHHHHHHHHhccccCHHHH
Confidence 6789999999999999998322043321 1000010000000000111111 1 12233333444432 2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccccc-----cccc--cccccccchHHHHHHHHHHcCCHHHHHHhhhcc
Q 002872 265 AEALRMTTWMVEYFYNRVQNVIKKYSIE-----RHWQ--TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFD 329 (872)
Q Consensus 265 ~~aL~va~~~ad~~~~~~~~~~~~~~~~-----~~~~--~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~ 329 (872)
++.|+.|+++-+|..+.-+.. ++.. .... ....| +..+-+|||+.|||+.||+-|+.+.
T Consensus 312 ~~~L~~Ak~l~~fA~~~~~~~---y~~~~~~~~g~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~ 377 (639)
T 1clc_A 312 EKCINAAKVSYEFLKNNPANV---FANQSGFSTGEYATVSDADD---RLWAAAEMWETLGDEEYLRDFENRA 377 (639)
T ss_dssp HHHHHHHHHHHHHHHHCCSCC---CCCCTTCCSCCCCCSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCc---cCCCccccccccCCCCcchH---HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 578888888888886532110 1100 0000 00112 2357789999999999999987653
No 53
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=73.54 E-value=13 Score=43.88 Aligned_cols=62 Identities=13% Similarity=0.098 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhcccc-ccccc--cccccccchHHHHHHHHHHcCCHHHHHHhhhcc
Q 002872 265 AEALRMTTWMVEYFYNRVQNVIKKYSI-ERHWQ--TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFD 329 (872)
Q Consensus 265 ~~aL~va~~~ad~~~~~~~~~~~~~~~-~~~~~--~l~~E~GGmneaL~~LY~~TGd~ryL~lA~~F~ 329 (872)
++.|+.|+++-+|..+.-+......+. ..... -...| +..+-+|||..|||++||+.++.+.
T Consensus 242 ~~~L~~Ak~~~~fA~~~~~~y~~~~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~ 306 (611)
T 2yik_A 242 AKSLDYAKALFDFAEKNPKGVVQGEDGPKGYYGSSKWQDD---YCWAAAWLYLATQNEHYLDEAFKYY 306 (611)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCCGGGTTTTTSCCCCSHHH---HHHHHHHHHHHHCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcCCcccCCCcccCcCCCCCCcccH---HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 578888888888886532111000000 00000 00112 2357789999999999999998763
No 54
>2kll_A Interleukin-33; beta-trefoil, cytokine, polymorphism, secreted; NMR {Homo sapiens}
Probab=65.91 E-value=91 Score=29.46 Aligned_cols=114 Identities=17% Similarity=0.228 Sum_probs=70.1
Q ss_pred CCCCcceeeeeecCCceEEEeecCCceeeeecCCCCCccccceEEEEEecCCCCCccccccCCCCccc--ccCCCCCCCc
Q 002872 670 SYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSV--MLEPFDSPGM 747 (872)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v--~l~p~~~p~~ 747 (872)
.||+|-++|.-++|.-...+. -+ .+.+.--...||.......+ -.+..+.+|+.+ .|.|- ++-
T Consensus 19 TYNDQsitFv~EdgsYeIyve---------Dl--~kdqekDkVLlryY~Sq~ps--~etgdgvdg~~LmVnlSP~--KDf 83 (161)
T 2kll_A 19 TYNDQSITFALEDESYEIYVE---------DL--KKDEKKDKVLLSYYESQHPS--NESGDGVDGKMLMVTLSPT--KDF 83 (161)
T ss_dssp ETTTEEEEEEECSSCEEEEEE---------EC--CSCCCCCCEEEEEEECCCCT--TTSCCCCSCCCEEEEEESS--SSE
T ss_pred cccCceEEEEEeCCcEEEEeh---------hh--ccchhcceEEEEeccCCCCc--cccCCCccccEEEEEcccc--cce
Confidence 366666666665554333333 21 12334456788866443222 122333566666 45554 466
Q ss_pred eEEeecCCceEEEecCCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 002872 748 LVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 800 (872)
Q Consensus 748 ~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~g~vsles~~~pg~~~~~~ 800 (872)
.+-..+.+.++.+..--.+.+++.|.+.--.. +..||||-.+.||.|+-+-
T Consensus 84 ~LHANnkehSVELqkce~~lPdQaFFvlH~~s--s~cVSFEck~~PGvfiGVK 134 (161)
T 2kll_A 84 WLHANNKEHSVELHKCEKPLPDQAFFVLHNMH--SNCVSFECKTDPGVFIGVK 134 (161)
T ss_dssp EEEEETTTTEEEEEECCSSCCTTTCEEEEECS--SSCEEEEESSSTTEEEEES
T ss_pred eEecCCccceeEeecccCCCCcceEEEEecCC--CceEEEEecCCCceEEEec
Confidence 66666677777776656667888888774443 5799999999999999654
No 55
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=63.93 E-value=1.2e+02 Score=34.02 Aligned_cols=154 Identities=14% Similarity=0.140 Sum_probs=81.0
Q ss_pred CCCCCchhhhhhcCchhhhhhhhhcccchHHHHHHHhhCCCCCCCCCCcccceecccCCCeEecCCCchH-HHHHHHHhh
Q 002872 63 HLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHW-RAQQTNLEY 141 (872)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~pl~~VrL~~~~~~~-~~~~~~~~y 141 (872)
-|.++.-++|++.+-|. +++ -.-|.+.|....+.+...+...........+++.+ ++.|+. ..-+..++.
T Consensus 19 ~~~~~~~~~w~~y~~~s----~~~-~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~y~s~~A~~iAd~ 89 (408)
T 1r76_A 19 SLPDTQRAAWQEYLARS----EAQ-LSRDKASLAAELAPGQPLPPPPAEGKGADTMPLDK----PAAWYTSKAARHVADV 89 (408)
T ss_dssp SCSSSSCHHHHHHHHHH----HHH-HHHHHHHHHHHSCTTCCCCCCCCCSCCGGGSCSSS----CGGGGGSHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh----HHH-HHHHHHHHHHHhccCCCCCCCCCCCCCccccccCC----chhhhchHHHHHHHHH
Confidence 46788889999977542 111 12456667777766331111111111234556655 356777 445666777
Q ss_pred hhccccc--hhhHhHHHhcCCCCCCCCC------------CCC---CCC----CcCcccchhhHHHHHHHHHHHh-c--C
Q 002872 142 LLMLDVD--KLVWNFRKTARLPAPGEPY------------GGW---EEP----SCELRGHFVGHYLSASALMWAS-T--H 197 (872)
Q Consensus 142 Ll~ld~d--rlL~nFR~~AGl~~~g~~y------------gGW---E~~----~~~l~Gh~~GhyLsA~A~~~a~-t--~ 197 (872)
|+..... ..-.|.-.+.-+..++..+ |.| +.. .+-++=.-+..-|-+++.++.. + +
T Consensus 90 ll~~Q~~~GGW~kn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~DnddTa~vl~aL~rv~~~~t~~~ 169 (408)
T 1r76_A 90 IVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRFLAQVVSQLAPEE 169 (408)
T ss_dssp HHHHCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHHHHHHHHHSCGGG
T ss_pred HHHccccCCCCCCccccccccchhhhhcccccccccccccccchhhcccccCCCCCCCCchHHHHHHHHHHHHhhccccc
Confidence 7643211 1111110011111111111 112 110 1111112255568888888887 7 8
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCcceecC
Q 002872 198 NESLKEKMSAVVSALSACQKEIGSGYLSAF 227 (872)
Q Consensus 198 D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~ 227 (872)
++.+++-+.+-|+.|+..|- +||=..+|
T Consensus 170 ~~~y~~Ai~Rgl~wlL~mQ~--~nGGWpqF 197 (408)
T 1r76_A 170 AAPYRDAALKGIEYLLASQF--PNGGWPQV 197 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHSC--TTSCCBSB
T ss_pred cHHHHHHHHHHHHHHHHccC--CCCCCcCc
Confidence 99999999999999999999 77643444
No 56
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=61.12 E-value=23 Score=40.29 Aligned_cols=87 Identities=17% Similarity=0.193 Sum_probs=60.4
Q ss_pred hhHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHH
Q 002872 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (872)
Q Consensus 182 ~GhyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~ 261 (872)
..+||=+.+.+|+.++|++|.+.+..|...+ +=|=|++.+.. -..++.-...-.||- +.+|++.|++
T Consensus 375 ~~~yll~~vra~~~s~D~~Lw~~~~~ma~~~-------~lgdi~~~~~~-~~~~~~~~~~~sp~l-----L~allEL~~a 441 (543)
T 2v8i_A 375 GNEFLISYARAYAIDNDPLLWKVARGIANDQ-------GLGDIGTAPGK-EVKVNMDTTNSDPYA-----LFALLDLYHA 441 (543)
T ss_dssp CHHHHHHHHHHHHHSCCHHHHHHHHHHHHHT-------TCEECTTBTTB-SCEECTTCCCCCHHH-----HHHHHHHHHH
T ss_pred CchhhHHHHHHHHcCCCHHHHHHHHHHHhhC-------CccccCCCcCc-ccccccCCCCcCHHH-----HHHHHHHHHH
Confidence 4678999999999999999988877765543 34555553211 001111123334553 4567899999
Q ss_pred cCChhHHHHHHHHHHHHHHH
Q 002872 262 ADNAEALRMTTWMVEYFYNR 281 (872)
Q Consensus 262 tG~~~aL~va~~~ad~~~~~ 281 (872)
|++++.++.|.++++-+.++
T Consensus 442 tq~~~~l~lA~~~g~nl~~~ 461 (543)
T 2v8i_A 442 SQVADYRKLAEKIGDNIIKI 461 (543)
T ss_dssp HCCHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999988753
No 57
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=49.55 E-value=49 Score=37.31 Aligned_cols=121 Identities=11% Similarity=0.119 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCc-ceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHHc
Q 002872 184 HYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSG-YLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYA 262 (872)
Q Consensus 184 hyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dG-YL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~t 262 (872)
-++=|++.+|..|+|+.+++++........++|. .+. +.. ...|.-...+..+ ||. +.+
T Consensus 212 E~~WAAa~Ly~aTgd~~Yl~~a~~~~~~~~~~~~--~~~~~~~-------------~~~Wd~~~~g~~~---lla--~~~ 271 (441)
T 1ia6_A 212 DLAWAATWLYTATNDSTYITDAEQFITLGNTMNE--NKMQDKW-------------TMCWDDMYVPAAL---RLA--QIT 271 (441)
T ss_dssp HHHHHHHHHHHHHCCTHHHHHHHHHTTC--------CGGGCSS-------------CSSSSCCHHHHHH---HHH--HHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhccc--ccccCCC-------------cCCccchHHHHHH---HHH--hcc
Confidence 4556999999999999999999876654444443 110 100 1133333333222 222 246
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHH--HHHHHcCCHHHHHHhhh
Q 002872 263 DNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLY--KLFCITQDPKHLMLAHL 327 (872)
Q Consensus 263 G~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmneaL~--~LY~~TGd~ryL~lA~~ 327 (872)
++++..+.+.+.++++...+..-..++.....|....- ..+.++. --++.+++++|+++|+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~---~~~~a~l~~~~~~~~~~~~y~~~A~~ 335 (441)
T 1ia6_A 272 GKQIYKDAIEFNFNYWKTQVTTTPGGLKWLSNWGVLRY---AAAESMVMLVYCKQNPDQSLLDLAKK 335 (441)
T ss_dssp CCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTTHHHH---HHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhhcccCCCCceecCCcchHHH---HHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 78888888888887765332211111111111221110 0222222 22578999999999975
No 58
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=47.34 E-value=55 Score=36.83 Aligned_cols=119 Identities=12% Similarity=0.117 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHHcC
Q 002872 184 HYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYAD 263 (872)
Q Consensus 184 hyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~tG 263 (872)
-++=|++.+|..|+|+.+++++......+... . +. ..-.|.-...+-.|+ ..+.++
T Consensus 214 E~~WAAa~Ly~aTgd~~Yl~~~~~~~~~~~~~-~-----~~-------------~~~~Wd~~~~g~~~l-----la~~~~ 269 (433)
T 1ks8_A 214 ELVWAAAWLYRATNDNTYLNTAESLYDEFGLQ-N-----WG-------------GGLNWDSKVSGVQVL-----LAKLTN 269 (433)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHTTGG-G-----SC-------------CCCCSSCCHHHHHHH-----HHHHHC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCcC-c-----Cc-------------CCcCccchhhHHHHH-----HhhccC
Confidence 34669999999999999999988765443110 0 00 112343332222221 124468
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHH-cCCHHHHHHhhh
Q 002872 264 NAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCI-TQDPKHLMLAHL 327 (872)
Q Consensus 264 ~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~-TGd~ryL~lA~~ 327 (872)
+++..+.+..+++++........-++.....|....-- ..+-..+...++. +++++|+++|+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~-~n~a~l~~~~~~~~~~~~~y~~~A~~ 333 (433)
T 1ks8_A 270 KQAYKDTVQSYVNYLINNQQKTPKGLLYIDMWGTLRHA-ANAAFIMLEAAELGLSASSYRQFAQT 333 (433)
T ss_dssp CHHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTTHHHHH-HHHHHHHHHHHHTTSSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCcCCCCceeecCCchhHHH-HHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 88888889998888865432211111111122211000 0011234444556 899999999975
No 59
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=44.74 E-value=69 Score=30.00 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=24.9
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CccCCCcEEEECCeec
Q 002872 551 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQDL 589 (872)
Q Consensus 551 ~VtltV~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~~ 589 (872)
.|+++|..+ +....+|.+|.-. ........|.|||+.+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (139)
T 2w87_A 40 AVVWAIDAT-SSGRRTLTIRYANGGTANRNGSLVINGGSN 78 (139)
T ss_dssp EEEEEEEES-SCEEEEEEEEEECCSSSCCCEEEEETTTTT
T ss_pred EEEEEEECC-CCcEEEEEEEEECCCCCCceEEEEECCEEc
Confidence 466666654 4567788888764 3221258999999865
No 60
>2wry_A IL-1 beta, interleukin-1BETA; immune system, pyrogen, mitogen, inflammatory response; 1.58A {Gallus gallus} PDB: 3nj5_A
Probab=32.34 E-value=30 Score=33.93 Aligned_cols=37 Identities=24% Similarity=0.455 Sum_probs=26.7
Q ss_pred eEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002872 771 VFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLG 812 (872)
Q Consensus 771 ~f~~vpgl~g~~g~vsles~~~pg~~~~~~~~~~~g~~~~l~ 812 (872)
-||-..|. ..+.+|||+.+||||+-.. ...+.-|.|.
T Consensus 110 Fyr~~~G~---~~~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 146 (162)
T 2wry_A 110 FYRLDSPT---EGTTRFESAAFPGWFICTS--LQPRQPVGIT 146 (162)
T ss_dssp EEEEEETT---TTEEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred EEEecCCC---CCceEEEeccCCCcEEEcC--CCCCeEEEee
Confidence 45555664 3699999999999999753 2346677776
No 61
>2nvh_A IL-1 beta, interleukin-1 beta, catabolin; water, hydration, protein folding, cytokine; 1.53A {Homo sapiens} SCOP: b.42.1.2 PDB: 1iob_A 1itb_A 2i1b_A 2kh2_A 1i1b_A 4i1b_A 5i1b_A 6i1b_A 7i1b_A 9ilb_A 4dep_A* 3o4o_A* 1twm_A 1twe_A 1s0l_A 1too_A 1t4q_A 41bi_A 21bi_A 1hib_A ...
Probab=31.64 E-value=20 Score=34.83 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=22.0
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002872 783 RTVSLESETYKGCFVYTAVNLQSSESTKLG 812 (872)
Q Consensus 783 g~vsles~~~pg~~~~~~~~~~~g~~~~l~ 812 (872)
.+.+|||+.+||||+-.. ...+.-|.|.
T Consensus 108 ~~~~fESaa~PgWFI~Ts--~~~~qPV~Lt 135 (153)
T 2nvh_A 108 NKLEFESAQFPNWYISTS--QAENMPVFLG 135 (153)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEE
T ss_pred CeeEEEeccCCCcEEecC--CCCCeEEEee
Confidence 689999999999999753 2346677777
No 62
>2ila_A Interleukin-1 alpha; cytokine; 2.30A {Homo sapiens} SCOP: b.42.1.2 PDB: 2kki_A 2l5x_A
Probab=30.77 E-value=20 Score=35.02 Aligned_cols=26 Identities=15% Similarity=0.016 Sum_probs=21.3
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002872 783 RTVSLESETYKGCFVYTAVNLQSSESTKLG 812 (872)
Q Consensus 783 g~vsles~~~pg~~~~~~~~~~~g~~~~l~ 812 (872)
.+.+|||+.+||||+-.. .+.-|.|.
T Consensus 114 ~~~~FESaa~PgWFI~Ts----~~qPV~Lt 139 (155)
T 2ila_A 114 TKNYFTSVAHPNLFIATK----QDYWVCLA 139 (155)
T ss_pred CeeEEEeccCCCcEEEcC----CCCCeEee
Confidence 589999999999999753 16677776
No 63
>1md6_A Interleukin 1 family, member 5 (delta); beta triple, alpha helix, immune system; 1.60A {Mus musculus} SCOP: b.42.1.2
Probab=30.39 E-value=21 Score=34.83 Aligned_cols=27 Identities=33% Similarity=0.562 Sum_probs=21.4
Q ss_pred eEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002872 784 TVSLESETYKGCFVYTAVNLQSSESTKLG 812 (872)
Q Consensus 784 ~vsles~~~pg~~~~~~~~~~~g~~~~l~ 812 (872)
+.+|||+.+||||+-.. ...+.-|.|.
T Consensus 107 ~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 133 (154)
T 1md6_A 107 TSSFESAAYPGWFLCTS--PEADQPVRLT 133 (154)
T ss_dssp CEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred eEEEEeccCCCcEEecC--CCCCeEEEee
Confidence 89999999999999753 2346677776
No 64
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=29.52 E-value=2.9e+02 Score=25.86 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=25.1
Q ss_pred EEEEEEEeCCCCeeeEEEEecc-CCccCCCcEEEECCeec
Q 002872 551 RVTLTFSSKGSGLTTSLNLRIP-TWTSSNGAKATLNGQDL 589 (872)
Q Consensus 551 ~VtltV~~~~~~~~ftL~LRIP-~Wa~~~~~~v~VNG~~~ 589 (872)
.|+++|+.. ++...+|.+|.- +........|.|||+.+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (145)
T 2w3j_A 40 SIVWSLSAA-SAKTYTAQIRFGNGGTSARRATVVVNDSQI 78 (145)
T ss_dssp EEEEEEEES-SCEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC-CCeEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 466666654 456778888875 33222257999999865
No 65
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=28.54 E-value=1.5e+02 Score=32.31 Aligned_cols=91 Identities=16% Similarity=0.115 Sum_probs=60.0
Q ss_pred hhHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCcceecCCchhhhhhhhcCCCccccchHHHHHHHHHHHHHH
Q 002872 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (872)
Q Consensus 182 ~GhyLsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~f~~~~~l~~~W~pyy~~HkI~aGLld~y~~ 261 (872)
+..=|.+++.++..++++.+++-+++-|+.|+..|- +||=..+|.... ..=..+-|+.. -+++.+|.....
T Consensus 76 Ta~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~--~nGGWpqFdpd~-----~~Yl~~IpFnD--DvtarvLelL~~ 146 (332)
T 1gxm_A 76 TITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQY--STGALPQFYPLK-----GGYSDHATFND--NGMAYALTVLDF 146 (332)
T ss_dssp THHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC--TTSCCBSEESCC-----SGGGGSEECGG--GHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccC--CCCCccccCCCc-----ccccccCCcch--HHHHHHHHHHHH
Confidence 556788899999999999999999999999999999 776555553210 00011123332 134444443333
Q ss_pred cCC---------------hhHHHHHHHHHHHHHHH
Q 002872 262 ADN---------------AEALRMTTWMVEYFYNR 281 (872)
Q Consensus 262 tG~---------------~~aL~va~~~ad~~~~~ 281 (872)
.+. .++...+.|-.+|+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~ 181 (332)
T 1gxm_A 147 AANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKA 181 (332)
T ss_dssp HHTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCccccccccchhhhhHHHHHHHHHHHHHh
Confidence 322 57778899999999764
No 66
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=27.90 E-value=4.8e+02 Score=29.79 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=37.8
Q ss_pred CCCceEEeecCCceEEEecCCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 002872 744 SPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 800 (872)
Q Consensus 744 ~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~g~vsles~~~pg~~~~~~ 800 (872)
.-|.|+.-.+..-.|.+..+...+.+.+|.++- ..+.|+|++. .|+||...
T Consensus 226 ~~GkYL~~~g~~g~L~~~~~~~~g~~E~F~L~~----~~~qVaL~s~--ngkyVsa~ 276 (493)
T 3llp_A 226 CEGRYLAPSGPSGTLKAGKATKVGKDELFALEQ----SCAQVVLQAA--NERNVSTR 276 (493)
T ss_dssp TTSCBEEEETTTTEEEECC---CCGGGCEEEEE----CCCEEEEECT--TSCEEECC
T ss_pred CCCCEEeEECCCCeEEeccCCCCCCceEEEEEe----CCCEEEEEec--CCcEEEec
Confidence 678888888766556555566667799999996 3689999987 89999753
No 67
>1ilt_A Interleukin-1 receptor antagonist; cytokine; 2.00A {Homo sapiens} SCOP: b.42.1.2 PDB: 1ilr_1 1ira_X* 2irt_A 1irp_A
Probab=26.64 E-value=24 Score=34.29 Aligned_cols=27 Identities=33% Similarity=0.519 Sum_probs=21.1
Q ss_pred eEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002872 784 TVSLESETYKGCFVYTAVNLQSSESTKLG 812 (872)
Q Consensus 784 ~vsles~~~pg~~~~~~~~~~~g~~~~l~ 812 (872)
+.+|||+.+||||+-.. ...+.-|.|.
T Consensus 108 ~~~fESaa~PgWFI~Ts--~~~~~PV~Lt 134 (152)
T 1ilt_A 108 TTSFESAACPGWFLCTA--MEADQPVSLT 134 (152)
T ss_pred ceEEEeccCCCcEEEcC--CcCCeEEEee
Confidence 89999999999999753 2235667776
No 68
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=25.87 E-value=2e+02 Score=26.74 Aligned_cols=37 Identities=19% Similarity=0.199 Sum_probs=21.4
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CccCCCcEEEECCee
Q 002872 551 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQD 588 (872)
Q Consensus 551 ~VtltV~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~ 588 (872)
.|+++|+.. ++...+|.+|.=. -.......|.|||+.
T Consensus 41 ~v~~~V~v~-~aG~Y~l~~ryan~~~~~~~~~l~VNG~~ 78 (144)
T 2w47_A 41 YIEWNVNAP-SSGSYALIFRYANGTTANRPMRITVNGNI 78 (144)
T ss_dssp EEEEEEEES-SSEEEEEEEEEECCSSSCCCEEEEETTEE
T ss_pred EEEEEEECC-CCcEEEEEEEEECCCCCCeEEEEEECCeE
Confidence 456666543 3556666666521 111115789999986
No 69
>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A
Probab=22.80 E-value=95 Score=29.12 Aligned_cols=34 Identities=24% Similarity=0.141 Sum_probs=23.8
Q ss_pred EEEECCeecCCCCCCCEEEEEeecCCCCEEEEEecceeEEEec
Q 002872 581 KATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAI 623 (872)
Q Consensus 581 ~v~VNG~~~~~~~~ggY~~I~R~Wk~GD~I~L~LPm~lr~~~~ 623 (872)
.|+|||+.+.. + + .-+.||+|+|.++-..+.+.+
T Consensus 35 ~V~VNG~~vk~---s-~-----~V~~GD~I~I~~~~~~~~~~v 68 (133)
T 1dm9_A 35 KVHYNGQRSKP---S-K-----IVELNATLTLRQGNDERTVIV 68 (133)
T ss_dssp CEEETTEECCT---T-C-----BCCTTCEEEEEETTEEEEEEE
T ss_pred cEEECCEEcCC---C-C-----EeCCCCEEEEEeCCceeeEEE
Confidence 68999997532 1 1 126799999999876665544
No 70
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=22.44 E-value=1.9e+02 Score=33.31 Aligned_cols=75 Identities=15% Similarity=0.059 Sum_probs=49.7
Q ss_pred HHHHHHHhCC------hHHHHHHHHHHHHHhccCeeeecCCCCCCCCCCCcccccCCCCCcccccchHHHHHHHHHHhcc
Q 002872 359 SQMRYEVTGD------QLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRW 432 (872)
Q Consensus 359 ~a~~Y~~TGD------~~y~~aa~~fwd~V~~~h~Y~TGG~g~~E~f~~p~~L~~~l~~~~~ETCas~nmlkl~~~Lf~~ 432 (872)
.|..+++-++ ++++++|+..|+...++..-. +..+.. .....|+.+.-.=+++.=+-.||+.
T Consensus 252 lA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~---------~~~~~~---~~~~~Y~~~~~~Del~wAA~~Ly~a 319 (537)
T 3gzk_A 252 MAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQP---------FHNPDG---ILTGEYGDAELRDELLWASCALLRM 319 (537)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCC---------CCCCTT---CCSCCCCCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhccccc---------ccCCcc---cccCCcCCCccchHHHHHHHHHHHH
Confidence 4555777776 688999999999987654311 111100 0112244444455577778899999
Q ss_pred cCCchhHHHHHHH
Q 002872 433 TKEIAYADYYERS 445 (872)
Q Consensus 433 tgd~~YaD~~ERa 445 (872)
|||.+|.++++..
T Consensus 320 Tgd~~Yl~~a~~~ 332 (537)
T 3gzk_A 320 TGDSAWARVCEPL 332 (537)
T ss_dssp HCCGGGHHHHHHH
T ss_pred hCCHHHHHHHHHh
Confidence 9999999999874
No 71
>2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A*
Probab=21.62 E-value=1.7e+02 Score=28.17 Aligned_cols=45 Identities=4% Similarity=-0.025 Sum_probs=33.9
Q ss_pred CCCceEEEee-ccCCCCCeEEEeecCCcceEEEEe-eccCCCCcEEEE
Q 002872 767 QGSSVFHLVA-GLDGGDRTVSLESETYKGCFVYTA-VNLQSSESTKLG 812 (872)
Q Consensus 767 ~~~s~f~~vp-gl~g~~g~vsles~~~pg~~~~~~-~~~~~g~~~~l~ 812 (872)
.++..|||.| |-+| +|+..+|++..+|.=+-+. ....+|.+|..-
T Consensus 92 ~~~~rWrI~~~G~~~-~G~f~I~nk~~s~~vldV~~~~t~~GAdVi~~ 138 (153)
T 2x2s_A 92 DPSARWTIKPATTHQ-YEVFTINNKVSELGQLTVKDYSTHSGADVLSA 138 (153)
T ss_dssp CGGGCEEEEESCC---CCCEEEEESSGGGCEEEEGGGCCSTTCBEEEE
T ss_pred CccceEEEEeccccC-cceEEEecccCCCceEEeccCCCCCCceEEEe
Confidence 4889999998 8899 7999999999999888643 444567777554
No 72
>3ltq_A Interleukin-1 beta; lanthanide binding TAG, LBT, terbium, IL1B, cytokine, inflam response, mitogen, pyrogen, secreted; 2.10A {Homo sapiens} SCOP: b.42.1.2
Probab=21.59 E-value=40 Score=33.37 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=21.3
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002872 783 RTVSLESETYKGCFVYTAVNLQSSESTKLG 812 (872)
Q Consensus 783 g~vsles~~~pg~~~~~~~~~~~g~~~~l~ 812 (872)
.+.+|||+.+||+|+-.. ...+..|.|.
T Consensus 126 s~stFESaa~PGWFI~Ts--~~~~qPV~Lt 153 (171)
T 3ltq_A 126 NKLEFESAQFPNWYISTS--QAENMPVFLG 153 (171)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEE
T ss_pred CceEEEecCCCCCEEeec--CCCCeeEEee
Confidence 478999999999999753 2345567776
Done!