Query 002874
Match_columns 872
No_of_seqs 783 out of 3263
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 04:57:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002874.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/002874hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 99.9 1.1E-25 8.2E-30 223.5 18.4 162 194-357 6-179 (183)
2 d1b7fa1 d.58.7.1 (A:123-204) S 99.6 1.9E-16 1.4E-20 137.1 9.1 76 279-354 2-82 (82)
3 d2cq0a1 d.58.7.1 (A:231-320) E 99.6 4.9E-16 3.6E-20 137.2 10.3 79 277-355 6-89 (90)
4 d1b7fa1 d.58.7.1 (A:123-204) S 99.6 4.7E-16 3.4E-20 134.6 9.8 75 194-268 2-81 (82)
5 d1fxla1 d.58.7.1 (A:37-118) Hu 99.6 7.3E-16 5.3E-20 133.3 10.1 75 194-268 2-81 (82)
6 d1fxla1 d.58.7.1 (A:37-118) Hu 99.6 5.8E-16 4.2E-20 133.9 9.4 75 279-353 2-81 (82)
7 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.6 5.9E-16 4.3E-20 136.2 9.2 79 277-355 5-88 (88)
8 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.6 1.3E-15 9.4E-20 135.4 11.4 79 192-270 7-90 (93)
9 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.6 8.4E-16 6.1E-20 135.2 9.9 80 190-269 3-87 (88)
10 d2cqba1 d.58.7.1 (A:1-89) Pept 99.6 5.1E-16 3.7E-20 136.8 8.1 80 278-357 4-88 (89)
11 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.6 8.9E-16 6.5E-20 136.5 9.7 81 278-358 6-91 (93)
12 d2cq0a1 d.58.7.1 (A:231-320) E 99.6 1E-15 7.3E-20 135.2 9.8 79 192-270 6-89 (90)
13 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.6 1.2E-15 8.8E-20 135.6 9.5 78 278-355 8-90 (93)
14 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.6 2.1E-15 1.5E-19 134.1 11.0 78 192-269 5-87 (93)
15 d1whwa_ d.58.7.1 (A:) Probable 99.6 3.5E-15 2.5E-19 133.9 12.3 81 192-272 6-91 (99)
16 d2cqba1 d.58.7.1 (A:1-89) Pept 99.6 1E-15 7.5E-20 134.8 8.6 78 193-270 4-86 (89)
17 d2f9da1 d.58.7.1 (A:12-125) Pr 99.6 8.2E-16 5.9E-20 141.3 8.1 102 192-305 5-108 (114)
18 d2f9da1 d.58.7.1 (A:12-125) Pr 99.6 1.7E-15 1.2E-19 139.2 10.3 100 279-382 7-108 (114)
19 d1fjca_ d.58.7.1 (A:) Nucleoli 99.6 8.4E-16 6.2E-20 137.3 8.0 82 277-358 14-95 (96)
20 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.6 2.1E-15 1.5E-19 133.1 10.3 81 277-357 6-89 (90)
21 d2cpha1 d.58.7.1 (A:454-547) P 99.6 3.3E-15 2.4E-19 133.0 11.6 80 191-270 5-91 (94)
22 d2cpza1 d.58.7.1 (A:383-484) C 99.6 1.3E-15 9.5E-20 137.7 9.0 80 278-357 17-101 (102)
23 d1cvja2 d.58.7.1 (A:91-179) Po 99.6 5E-16 3.6E-20 136.9 6.0 79 279-357 8-89 (89)
24 d2cq3a1 d.58.7.1 (A:110-202) R 99.6 3.3E-15 2.4E-19 132.7 11.5 80 276-355 8-90 (93)
25 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.6 3.7E-15 2.7E-19 131.5 11.4 80 191-270 5-87 (90)
26 d2cpha1 d.58.7.1 (A:454-547) P 99.6 2.2E-15 1.6E-19 134.1 9.9 79 278-356 7-92 (94)
27 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.6 4.1E-15 3E-19 129.2 11.3 77 191-267 5-82 (83)
28 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.6 2.9E-15 2.1E-19 130.2 9.8 76 277-352 6-82 (83)
29 d2adca1 d.58.7.1 (A:335-443) P 99.6 7E-16 5.1E-20 140.4 6.1 77 279-355 2-79 (109)
30 d1no8a_ d.58.7.1 (A:) Nuclear 99.6 2.5E-15 1.8E-19 129.1 9.3 73 280-352 1-77 (78)
31 d2ghpa1 d.58.7.1 (A:116-196) U 99.6 1.7E-15 1.3E-19 130.8 8.2 75 194-268 1-80 (81)
32 d2cpza1 d.58.7.1 (A:383-484) C 99.6 2.8E-15 2.1E-19 135.4 10.0 80 192-271 16-100 (102)
33 d2cq3a1 d.58.7.1 (A:110-202) R 99.6 7.3E-15 5.3E-19 130.4 12.4 80 191-270 8-90 (93)
34 d2ghpa1 d.58.7.1 (A:116-196) U 99.6 1.5E-15 1.1E-19 131.1 7.4 74 280-353 2-80 (81)
35 d1whxa_ d.58.7.1 (A:) Probable 99.6 2.6E-15 1.9E-19 136.9 9.3 78 191-269 7-84 (111)
36 d1fjca_ d.58.7.1 (A:) Nucleoli 99.6 1.8E-15 1.3E-19 135.0 8.1 81 191-271 13-93 (96)
37 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.6 3.3E-15 2.4E-19 131.6 9.6 79 193-271 4-87 (90)
38 d1whwa_ d.58.7.1 (A:) Probable 99.6 4.1E-15 3E-19 133.4 10.4 79 278-356 7-90 (99)
39 d1cvja1 d.58.7.1 (A:11-90) Pol 99.6 2.5E-15 1.8E-19 129.7 8.2 73 281-353 2-79 (80)
40 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.6 8.2E-15 6E-19 130.5 11.5 79 191-269 11-91 (95)
41 d1p1ta_ d.58.7.1 (A:) Cleavage 99.6 1.2E-15 8.9E-20 138.0 6.2 81 189-269 3-88 (104)
42 d2cpda1 d.58.7.1 (A:223-308) A 99.6 5.1E-15 3.7E-19 129.3 9.9 79 193-272 7-85 (86)
43 d2cpfa1 d.58.7.1 (A:362-446) P 99.6 4.5E-15 3.3E-19 129.3 9.5 75 197-271 1-83 (85)
44 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.5 2.1E-15 1.5E-19 132.9 7.1 81 278-358 4-89 (90)
45 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.5 4.5E-15 3.3E-19 141.1 9.9 79 279-357 42-125 (139)
46 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.5 1E-14 7.4E-19 130.0 11.4 81 191-271 5-96 (98)
47 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.5 9.3E-15 6.8E-19 138.9 11.8 81 191-271 39-124 (139)
48 d2u2fa_ d.58.7.1 (A:) Splicing 99.5 3.4E-15 2.5E-19 130.5 8.0 76 280-355 2-82 (85)
49 d1b7fa2 d.58.7.1 (A:205-289) S 99.5 7.6E-15 5.5E-19 128.0 10.2 75 192-266 4-85 (85)
50 d2cpfa1 d.58.7.1 (A:362-446) P 99.5 3.7E-15 2.7E-19 129.9 8.1 74 282-355 1-82 (85)
51 d2adca2 d.58.7.1 (A:444-531) P 99.5 9.2E-15 6.7E-19 128.2 10.7 77 192-268 8-86 (88)
52 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.5 5.5E-15 4E-19 132.2 9.3 76 279-355 18-93 (96)
53 d2u2fa_ d.58.7.1 (A:) Splicing 99.5 5.1E-15 3.7E-19 129.3 8.9 76 195-270 2-82 (85)
54 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.5 8.8E-15 6.4E-19 130.3 10.5 77 278-354 13-91 (95)
55 d1wf2a_ d.58.7.1 (A:) Heteroge 99.5 7.5E-15 5.4E-19 131.8 10.1 75 278-355 14-89 (98)
56 d1cvja2 d.58.7.1 (A:91-179) Po 99.5 5E-15 3.7E-19 130.3 8.7 77 194-270 8-87 (89)
57 d1cvja1 d.58.7.1 (A:11-90) Pol 99.5 5.6E-15 4.1E-19 127.4 8.7 72 196-267 2-78 (80)
58 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.5 9.5E-15 6.9E-19 130.6 10.4 76 193-269 17-92 (96)
59 d2cqca1 d.58.7.1 (A:109-191) A 99.5 7E-15 5.1E-19 127.6 9.0 72 192-263 7-83 (83)
60 d2adca1 d.58.7.1 (A:335-443) P 99.5 1.3E-14 9.3E-19 131.9 11.2 76 194-269 2-78 (109)
61 d1no8a_ d.58.7.1 (A:) Nuclear 99.5 8.5E-15 6.2E-19 125.8 9.4 72 196-267 2-77 (78)
62 d2ghpa3 d.58.7.1 (A:206-291) U 99.5 6.3E-15 4.6E-19 129.0 8.6 76 278-354 3-85 (86)
63 d2cqda1 d.58.7.1 (A:1-103) RNA 99.5 7.4E-15 5.4E-19 132.9 9.3 82 275-357 6-92 (103)
64 d1fxla2 d.58.7.1 (A:119-203) H 99.5 1.1E-14 7.7E-19 127.2 10.0 73 194-266 6-85 (85)
65 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.5 4.3E-15 3.1E-19 130.6 7.5 79 192-272 3-81 (88)
66 d2cq4a1 d.58.7.1 (A:132-232) R 99.5 2.8E-15 2E-19 135.4 6.4 77 277-354 16-97 (101)
67 d1b7fa2 d.58.7.1 (A:205-289) S 99.5 7.7E-15 5.6E-19 127.9 9.0 74 278-351 5-85 (85)
68 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.5 9.9E-15 7.2E-19 131.5 9.9 78 191-268 15-96 (101)
69 d2cqda1 d.58.7.1 (A:1-103) RNA 99.5 1.7E-14 1.2E-18 130.5 11.2 81 191-272 7-92 (103)
70 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.5 1.9E-15 1.4E-19 130.6 4.6 77 280-357 2-79 (80)
71 d2cqca1 d.58.7.1 (A:109-191) A 99.5 1.1E-14 8.2E-19 126.2 9.6 71 278-348 8-83 (83)
72 d1fxla2 d.58.7.1 (A:119-203) H 99.5 8.7E-15 6.3E-19 127.8 8.8 74 278-351 5-85 (85)
73 d1nu4a_ d.58.7.1 (A:) Spliceso 99.5 8.2E-15 5.9E-19 129.5 8.6 79 192-270 1-85 (91)
74 d1whxa_ d.58.7.1 (A:) Probable 99.5 6.2E-15 4.5E-19 134.4 8.0 76 278-354 9-84 (111)
75 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.5 4.6E-15 3.4E-19 128.6 6.8 76 282-357 1-82 (83)
76 d2cpda1 d.58.7.1 (A:223-308) A 99.5 9E-15 6.6E-19 127.7 8.5 77 279-356 8-84 (86)
77 d2cpja1 d.58.7.1 (A:65-150) No 99.5 1.3E-14 9.3E-19 127.1 9.5 76 194-270 8-83 (86)
78 d2cqga1 d.58.7.1 (A:96-185) TA 99.5 1.7E-14 1.2E-18 127.6 10.3 78 192-271 6-88 (90)
79 d2adca2 d.58.7.1 (A:444-531) P 99.5 1.1E-14 7.7E-19 127.8 8.9 77 278-354 9-87 (88)
80 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.5 3.8E-15 2.8E-19 128.6 5.7 76 195-271 2-78 (80)
81 d2cpea1 d.58.7.1 (A:353-453) R 99.5 1.1E-14 7.9E-19 130.6 8.9 82 189-270 3-97 (101)
82 d1p1ta_ d.58.7.1 (A:) Cleavage 99.5 4.7E-15 3.4E-19 134.1 6.5 79 278-356 7-90 (104)
83 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.5 4.2E-15 3E-19 130.7 5.9 78 278-357 4-81 (88)
84 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.5 1.5E-14 1.1E-18 124.5 9.1 75 192-269 3-77 (79)
85 d2cpja1 d.58.7.1 (A:65-150) No 99.5 9E-15 6.5E-19 128.1 7.8 76 279-355 8-83 (86)
86 d1x4ba1 d.58.7.1 (A:8-110) Het 99.5 9E-15 6.6E-19 132.5 7.9 79 278-357 19-102 (103)
87 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.5 7E-15 5.1E-19 127.5 6.8 75 197-271 1-81 (83)
88 d2cqga1 d.58.7.1 (A:96-185) TA 99.5 2.4E-14 1.8E-18 126.5 10.2 77 278-356 7-88 (90)
89 d2cpea1 d.58.7.1 (A:353-453) R 99.5 8.5E-15 6.2E-19 131.3 7.3 81 277-357 6-99 (101)
90 d1wf2a_ d.58.7.1 (A:) Heteroge 99.5 2.2E-14 1.6E-18 128.7 10.0 77 191-270 12-89 (98)
91 d2cpxa1 d.58.7.1 (A:291-392) R 99.5 6.6E-15 4.8E-19 132.4 6.5 80 192-271 16-100 (102)
92 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.5 2.7E-14 2E-18 127.1 10.4 79 278-356 7-96 (98)
93 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.5 1.1E-14 7.9E-19 125.4 7.5 75 278-355 4-78 (79)
94 d2ghpa3 d.58.7.1 (A:206-291) U 99.5 1.4E-14 1E-18 126.8 8.2 76 193-269 3-85 (86)
95 d1wg1a_ d.58.7.1 (A:) Probable 99.5 2.6E-14 1.9E-18 125.6 9.3 76 193-270 4-79 (88)
96 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.5 3E-14 2.2E-18 124.1 9.6 74 193-267 5-83 (84)
97 d2disa1 d.58.7.1 (A:8-103) Hyp 99.5 3.6E-14 2.7E-18 126.4 10.0 81 194-274 1-90 (96)
98 d1wg1a_ d.58.7.1 (A:) Probable 99.5 1.4E-14 1E-18 127.3 7.1 75 279-355 5-79 (88)
99 d1whya_ d.58.7.1 (A:) Putative 99.5 5.6E-14 4.1E-18 125.5 10.9 77 192-269 15-93 (97)
100 d2adba1 d.58.7.1 (A:177-284) P 99.5 3.9E-14 2.9E-18 129.0 10.0 80 191-270 4-86 (108)
101 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.5 1.9E-14 1.4E-18 129.7 7.6 77 278-354 17-97 (101)
102 d1x4ba1 d.58.7.1 (A:8-110) Het 99.5 2.4E-14 1.8E-18 129.6 8.4 78 193-271 19-101 (103)
103 d1u1qa_ d.58.7.1 (A:) Nuclear 99.5 6.1E-14 4.4E-18 137.9 12.0 154 101-269 11-176 (183)
104 d2cq1a1 d.58.7.1 (A:51-138) Po 99.5 7.6E-14 5.5E-18 122.3 11.4 80 190-270 4-85 (88)
105 d2cq4a1 d.58.7.1 (A:132-232) R 99.5 9.4E-15 6.8E-19 131.9 5.6 77 191-268 15-96 (101)
106 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.5 4.6E-14 3.4E-18 122.9 9.8 74 278-352 5-83 (84)
107 d3begb1 d.58.7.1 (B:121-207) S 99.5 1.2E-14 8.8E-19 127.4 5.8 73 281-355 2-74 (87)
108 d1wg4a_ d.58.7.1 (A:) Splicing 99.5 5.7E-14 4.1E-18 126.0 10.1 81 188-270 9-89 (98)
109 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.5 5.3E-14 3.9E-18 120.0 9.5 71 282-354 1-71 (75)
110 d1l3ka2 d.58.7.1 (A:103-181) N 99.5 4.8E-14 3.5E-18 120.9 9.2 72 194-266 2-78 (79)
111 d1hd0a_ d.58.7.1 (A:) Heteroge 99.5 2.8E-14 2E-18 121.6 7.7 70 281-351 1-75 (75)
112 d2cpxa1 d.58.7.1 (A:291-392) R 99.5 1.4E-14 1E-18 130.2 6.1 80 278-357 17-101 (102)
113 d1whya_ d.58.7.1 (A:) Putative 99.5 4.9E-14 3.6E-18 125.9 9.5 77 278-355 16-94 (97)
114 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.5 6.2E-14 4.5E-18 119.6 9.6 71 197-269 1-71 (75)
115 d1nu4a_ d.58.7.1 (A:) Spliceso 99.5 2.4E-14 1.7E-18 126.4 7.2 78 279-356 3-86 (91)
116 d1hd0a_ d.58.7.1 (A:) Heteroge 99.5 4.7E-14 3.4E-18 120.2 8.8 70 196-266 1-75 (75)
117 d1l3ka2 d.58.7.1 (A:103-181) N 99.5 5.3E-14 3.9E-18 120.6 8.8 71 280-351 3-78 (79)
118 d1uawa_ d.58.7.1 (A:) Musashi- 99.5 1.6E-14 1.1E-18 124.0 5.4 71 280-351 1-76 (77)
119 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.5 1.4E-14 1E-18 128.2 5.0 78 191-269 10-91 (91)
120 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.5 9.1E-15 6.6E-19 129.4 3.4 76 278-354 12-91 (91)
121 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.5 1.5E-13 1.1E-17 124.0 11.5 79 192-272 13-97 (104)
122 d3begb1 d.58.7.1 (B:121-207) S 99.5 3.2E-14 2.3E-18 124.6 6.8 73 195-269 1-73 (87)
123 d1wg4a_ d.58.7.1 (A:) Splicing 99.4 3.5E-14 2.5E-18 127.4 6.9 77 278-356 14-90 (98)
124 d1wexa_ d.58.7.1 (A:) Heteroge 99.4 3.1E-13 2.2E-17 122.2 13.3 80 190-270 11-92 (104)
125 d1uawa_ d.58.7.1 (A:) Musashi- 99.4 2.4E-14 1.7E-18 122.9 5.4 71 195-266 1-76 (77)
126 d2msta_ d.58.7.1 (A:) Neural R 99.4 3.5E-14 2.6E-18 120.3 6.4 70 281-351 1-75 (75)
127 d2msta_ d.58.7.1 (A:) Neural R 99.4 5.6E-14 4.1E-18 119.0 7.1 70 196-266 1-75 (75)
128 d2cpia1 d.58.7.1 (A:101-189) E 99.4 1.2E-13 8.7E-18 121.6 9.5 72 278-349 7-89 (89)
129 d2adba1 d.58.7.1 (A:177-284) P 99.4 3.6E-14 2.6E-18 129.2 6.3 78 279-356 7-87 (108)
130 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.4 1.6E-13 1.2E-17 123.8 10.3 78 278-357 14-97 (104)
131 d1zh5a2 d.58.7.1 (A:105-189) L 99.4 1.1E-13 8.4E-18 120.6 8.9 73 193-266 5-81 (85)
132 d2ghpa2 d.58.7.1 (A:41-115) U4 99.4 1.1E-13 8.3E-18 117.9 8.6 71 280-351 1-74 (75)
133 d1zh5a2 d.58.7.1 (A:105-189) L 99.4 9.9E-14 7.2E-18 121.1 7.8 74 278-352 5-82 (85)
134 d2cq1a1 d.58.7.1 (A:51-138) Po 99.4 2.7E-13 2E-17 118.7 10.5 78 277-355 6-85 (88)
135 d1x0fa1 d.58.7.1 (A:183-257) N 99.4 5.9E-14 4.3E-18 119.8 5.5 70 281-351 1-75 (75)
136 d2disa1 d.58.7.1 (A:8-103) Hyp 99.4 1.1E-13 8.4E-18 123.1 7.6 78 280-357 2-88 (96)
137 d1x0fa1 d.58.7.1 (A:183-257) N 99.4 1E-13 7.4E-18 118.3 6.8 70 196-266 1-75 (75)
138 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.4 9.9E-14 7.2E-18 116.8 6.2 66 197-262 1-71 (72)
139 d2ghpa2 d.58.7.1 (A:41-115) U4 99.4 2.5E-13 1.8E-17 115.7 8.6 71 195-266 1-74 (75)
140 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.4 8.3E-14 6E-18 117.3 5.1 66 282-347 1-71 (72)
141 d1x4da1 d.58.7.1 (A:8-96) Matr 99.4 4.2E-13 3.1E-17 118.1 9.9 78 190-268 4-84 (89)
142 d1wexa_ d.58.7.1 (A:) Heteroge 99.4 6.3E-13 4.6E-17 120.1 10.8 79 277-356 13-93 (104)
143 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.4 3.6E-13 2.6E-17 120.8 9.0 79 190-269 14-95 (99)
144 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.4 3.7E-13 2.7E-17 120.7 8.9 78 277-355 16-96 (99)
145 d2cqpa1 d.58.7.1 (A:917-1002) 99.4 1.9E-13 1.4E-17 119.0 6.4 75 192-266 7-86 (86)
146 d1wg5a_ d.58.7.1 (A:) Heteroge 99.4 9.2E-13 6.7E-17 118.9 11.2 79 191-270 12-95 (104)
147 d2cqpa1 d.58.7.1 (A:917-1002) 99.4 1.7E-13 1.2E-17 119.4 6.0 74 278-351 8-86 (86)
148 d1wg5a_ d.58.7.1 (A:) Heteroge 99.4 6.4E-13 4.7E-17 120.0 9.7 79 277-356 13-96 (104)
149 d1weza_ d.58.7.1 (A:) Heteroge 99.4 7E-13 5.1E-17 119.4 9.4 81 189-270 10-93 (102)
150 d1weza_ d.58.7.1 (A:) Heteroge 99.4 4.6E-13 3.4E-17 120.6 8.0 79 277-357 13-95 (102)
151 d2cpia1 d.58.7.1 (A:101-189) E 99.4 2.6E-13 1.9E-17 119.4 6.0 72 193-264 7-89 (89)
152 d1x4da1 d.58.7.1 (A:8-96) Matr 99.4 1.2E-12 8.9E-17 115.1 10.3 76 278-354 7-85 (89)
153 d1weya_ d.58.7.1 (A:) Calcipre 99.3 4.1E-13 3E-17 121.7 5.8 79 278-357 4-87 (104)
154 d1weya_ d.58.7.1 (A:) Calcipre 99.3 6.2E-13 4.5E-17 120.5 6.2 79 192-271 3-86 (104)
155 d2cpya1 d.58.7.1 (A:536-638) R 99.3 1.2E-12 8.8E-17 117.8 6.1 75 192-267 6-85 (103)
156 d2cpya1 d.58.7.1 (A:536-638) R 99.3 8.2E-13 6E-17 118.9 4.8 75 279-354 8-87 (103)
157 d1u2fa_ d.58.7.1 (A:) Splicing 99.2 2.9E-13 2.1E-17 118.9 -0.9 71 195-266 2-82 (90)
158 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=1.1e-25 Score=223.47 Aligned_cols=162 Identities=20% Similarity=0.374 Sum_probs=140.1
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCC
Q 002874 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 268 (872)
Q Consensus 194 srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~p 268 (872)
.|+|||+|||+++|+++|+++|++||.|.++.+ ++.++|||||+|.+.++|++|+. +.+..+.++.+.+.+..+
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~-~~~~~~~~~~~~~~~~~~ 84 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAVS 84 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHH-hcCCcccccchhhhhhhh
Confidence 489999999999999999999999999998873 56789999999999999999998 566777888888877654
Q ss_pred CCCC--CCccccccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCcee
Q 002874 269 KDNP--SEKDVNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDI 341 (872)
Q Consensus 269 k~~~--~~~~~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l 341 (872)
.... .......++|||+|||+.+|+++|+++|+.||.|..+.+ ++.++|||||+|.+.++|.+|++ +++..|
T Consensus 85 ~~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~ 163 (183)
T d1u1qa_ 85 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTV 163 (183)
T ss_dssp TTGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEE
T ss_pred cccccccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeE
Confidence 4322 122345679999999999999999999999999999965 35678999999999999999997 799999
Q ss_pred CCcEEEEEecCCCccc
Q 002874 342 NGKRIKLEPSRPGGAR 357 (872)
Q Consensus 342 ~Gr~L~V~~s~p~~~r 357 (872)
.|++|+|.+|.++.++
T Consensus 164 ~G~~i~V~~A~~k~e~ 179 (183)
T d1u1qa_ 164 NGHNCEVRKALSKQEM 179 (183)
T ss_dssp TTEEEEEEECCCHHHH
T ss_pred CCEEEEEEecCCcccc
Confidence 9999999999887554
No 2
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.64 E-value=1.9e-16 Score=137.08 Aligned_cols=76 Identities=26% Similarity=0.440 Sum_probs=70.9
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCC
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRP 353 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p 353 (872)
.++|||+|||+++++++|+++|++||.|+++++ ++.++|||||+|.+.++|++|++.|||..|.|++|+|+||+|
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 457999999999999999999999999999976 345689999999999999999999999999999999999998
Q ss_pred C
Q 002874 354 G 354 (872)
Q Consensus 354 ~ 354 (872)
+
T Consensus 82 g 82 (82)
T d1b7fa1 82 G 82 (82)
T ss_dssp C
T ss_pred C
Confidence 5
No 3
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=4.9e-16 Score=137.21 Aligned_cols=79 Identities=22% Similarity=0.353 Sum_probs=73.0
Q ss_pred ccccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 277 VNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 277 ~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
...++|||+|||.++++++|+++|++||.|.+|++ ++.++|||||+|.+.++|++|++.|||..|+|++|+|+|+
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 34678999999999999999999999999999975 3567899999999999999999999999999999999999
Q ss_pred CCCc
Q 002874 352 RPGG 355 (872)
Q Consensus 352 ~p~~ 355 (872)
+|+.
T Consensus 86 kp~~ 89 (90)
T d2cq0a1 86 KPST 89 (90)
T ss_dssp SCCC
T ss_pred eCCC
Confidence 9874
No 4
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.62 E-value=4.7e-16 Score=134.61 Aligned_cols=75 Identities=21% Similarity=0.435 Sum_probs=70.6
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCC
Q 002874 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 268 (872)
Q Consensus 194 srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~p 268 (872)
+++|||+|||.++++++|+++|++||+|.+|++ ++.++|||||+|.+.++|++|++.|+|..+.|++|+|+|+.|
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 578999999999999999999999999999973 456789999999999999999999999999999999999976
No 5
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=7.3e-16 Score=133.27 Aligned_cols=75 Identities=24% Similarity=0.470 Sum_probs=70.4
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCC
Q 002874 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 268 (872)
Q Consensus 194 srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~p 268 (872)
.++|||+|||.++++++|+++|++||+|.+|++ .++++|||||+|.+.++|++|++.|+|..+.|++|+|.|+.|
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 468999999999999999999999999999873 457889999999999999999999999999999999999976
No 6
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=5.8e-16 Score=133.92 Aligned_cols=75 Identities=28% Similarity=0.509 Sum_probs=70.0
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCC
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRP 353 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p 353 (872)
.++|||+|||.++++++|+++|++||.|.+|++ .+..+|||||+|.+.++|++|++.|||..|+|++|+|+||+|
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 357999999999999999999999999999976 246689999999999999999999999999999999999987
No 7
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.61 E-value=5.9e-16 Score=136.20 Aligned_cols=79 Identities=28% Similarity=0.401 Sum_probs=72.1
Q ss_pred ccccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 277 VNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 277 ~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
....+|||+|||.++++++|+++|++||.|++|++ +++++|||||+|.+.++|++|++.|||..|+|++|+|+||
T Consensus 5 ~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a 84 (88)
T d1rk8a_ 5 VEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWC 84 (88)
T ss_dssp C-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 35678999999999999999999999999999976 3456899999999999999999999999999999999999
Q ss_pred CCCc
Q 002874 352 RPGG 355 (872)
Q Consensus 352 ~p~~ 355 (872)
.+++
T Consensus 85 ~~kG 88 (88)
T d1rk8a_ 85 FVKG 88 (88)
T ss_dssp EECC
T ss_pred cCCC
Confidence 8764
No 8
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.3e-15 Score=135.41 Aligned_cols=79 Identities=16% Similarity=0.313 Sum_probs=73.4
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
...++|||+|||.++|+++|+++|++||+|.+|++ ++.++|||||+|.+.++|++|++.|+|..+.|++|+|+|+
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A 86 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKA 86 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEET
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 45689999999999999999999999999999973 4678999999999999999999999999999999999999
Q ss_pred CCCC
Q 002874 267 IPKD 270 (872)
Q Consensus 267 ~pk~ 270 (872)
.++.
T Consensus 87 ~~~~ 90 (93)
T d1x5ua1 87 SAHN 90 (93)
T ss_dssp TTTS
T ss_pred CCCC
Confidence 8764
No 9
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.60 E-value=8.4e-16 Score=135.20 Aligned_cols=80 Identities=20% Similarity=0.402 Sum_probs=72.5
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeee
Q 002874 190 GEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIH 264 (872)
Q Consensus 190 ~e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~ 264 (872)
...+.++|||+|||.++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|+|..+.|++|.|+
T Consensus 3 ~s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~ 82 (88)
T d1rk8a_ 3 RSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVD 82 (88)
T ss_dssp CCC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 3456789999999999999999999999999999873 35789999999999999999999999999999999999
Q ss_pred ecCCC
Q 002874 265 FSIPK 269 (872)
Q Consensus 265 ~a~pk 269 (872)
|+.++
T Consensus 83 ~a~~k 87 (88)
T d1rk8a_ 83 WCFVK 87 (88)
T ss_dssp ESEEC
T ss_pred EecCC
Confidence 99764
No 10
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=5.1e-16 Score=136.81 Aligned_cols=80 Identities=26% Similarity=0.442 Sum_probs=73.5
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
..++|||+|||+++++++|+++|++||.|.+|++ ++.++|||||+|.+.++|++|++.|||..|+|++|+|++++
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 3579999999999999999999999999999976 35678999999999999999999999999999999999999
Q ss_pred CCccc
Q 002874 353 PGGAR 357 (872)
Q Consensus 353 p~~~r 357 (872)
|+..+
T Consensus 84 p~~~k 88 (89)
T d2cqba1 84 PMRIK 88 (89)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 87543
No 11
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=8.9e-16 Score=136.47 Aligned_cols=81 Identities=23% Similarity=0.333 Sum_probs=73.8
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
..+||||+|||.++|+++|+++|++||.|.+|++ ++.++|||||+|.+.++|.+|++.|||..|+|++|+|+|+.
T Consensus 6 ~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~ 85 (93)
T d1h2vz_ 6 KSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDA 85 (93)
T ss_dssp TCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 4679999999999999999999999999999976 35568999999999999999999999999999999999998
Q ss_pred CCcccc
Q 002874 353 PGGARR 358 (872)
Q Consensus 353 p~~~r~ 358 (872)
.....+
T Consensus 86 ~~~~gr 91 (93)
T d1h2vz_ 86 GFKEGR 91 (93)
T ss_dssp CCCTTC
T ss_pred CCCCCC
Confidence 765544
No 12
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1e-15 Score=135.19 Aligned_cols=79 Identities=22% Similarity=0.448 Sum_probs=73.4
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
.+.++|||+|||.++++++|+++|++||+|.+|++ ++.++|||||+|.+.++|++|++.|+|..+.|++|.|+|+
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 45789999999999999999999999999999873 4678999999999999999999999999999999999999
Q ss_pred CCCC
Q 002874 267 IPKD 270 (872)
Q Consensus 267 ~pk~ 270 (872)
.|+.
T Consensus 86 kp~~ 89 (90)
T d2cq0a1 86 KPST 89 (90)
T ss_dssp SCCC
T ss_pred eCCC
Confidence 8764
No 13
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.2e-15 Score=135.62 Aligned_cols=78 Identities=24% Similarity=0.337 Sum_probs=72.6
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
..++|||+|||.++|+++|+++|++||.|.+|++ ++.++|||||+|.+.++|++|++.|||..|.|++|+|++|+
T Consensus 8 ~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~ 87 (93)
T d1x5ua1 8 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKAS 87 (93)
T ss_dssp TTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETT
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 3578999999999999999999999999999976 35678999999999999999999999999999999999998
Q ss_pred CCc
Q 002874 353 PGG 355 (872)
Q Consensus 353 p~~ 355 (872)
++.
T Consensus 88 ~~~ 90 (93)
T d1x5ua1 88 AHN 90 (93)
T ss_dssp TTS
T ss_pred CCC
Confidence 875
No 14
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=2.1e-15 Score=134.09 Aligned_cols=78 Identities=26% Similarity=0.419 Sum_probs=72.3
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
..++||||+|||.++|+++|+++|++||+|.+|.+ ++.++|||||+|.+.++|++|++.|+|..+.|++|.|+|+
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 46789999999999999999999999999999983 4668899999999999999999999999999999999998
Q ss_pred CCC
Q 002874 267 IPK 269 (872)
Q Consensus 267 ~pk 269 (872)
...
T Consensus 85 ~~~ 87 (93)
T d1h2vz_ 85 AGF 87 (93)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 15
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=3.5e-15 Score=133.89 Aligned_cols=81 Identities=26% Similarity=0.388 Sum_probs=74.3
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
..+++|||+|||+++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|++..|.|++|.|.++
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a 85 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 85 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEEC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 45788999999999999999999999999999983 4678999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 002874 267 IPKDNP 272 (872)
Q Consensus 267 ~pk~~~ 272 (872)
.++...
T Consensus 86 ~~~~~~ 91 (99)
T d1whwa_ 86 TIKKEA 91 (99)
T ss_dssp CCCSTT
T ss_pred CCCCcc
Confidence 876543
No 16
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1e-15 Score=134.82 Aligned_cols=78 Identities=26% Similarity=0.485 Sum_probs=72.7
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecC
Q 002874 193 PSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 267 (872)
Q Consensus 193 ~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~ 267 (872)
..++|||+|||+++++++|+++|++||+|.+|++ ++.++|||||+|.+.++|++|++.|++..+.|++|.|.|+.
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 4689999999999999999999999999999983 46789999999999999999999999999999999999998
Q ss_pred CCC
Q 002874 268 PKD 270 (872)
Q Consensus 268 pk~ 270 (872)
|+.
T Consensus 84 p~~ 86 (89)
T d2cqba1 84 PMR 86 (89)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 17
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=8.2e-16 Score=141.31 Aligned_cols=102 Identities=24% Similarity=0.391 Sum_probs=84.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe--CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCC
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT--ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 269 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~--~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk 269 (872)
..+++|||+|||.++++++|+++|++||+|.+|++ .+.++|||||+|.+.++|..|++.|+|..|.|++|.|.|+.++
T Consensus 5 ~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~~ 84 (114)
T d2f9da1 5 EVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNAN 84 (114)
T ss_dssp TCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCHH
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 35789999999999999999999999999999984 5678999999999999999999999999999999999998543
Q ss_pred CCCCCccccccceeeeccCCccchhhHhhhhcccCC
Q 002874 270 DNPSEKDVNQGTLVVFNLDASVSNDDLRQIFGAYGE 305 (872)
Q Consensus 270 ~~~~~~~~~~~tLfV~NLp~~~teedLre~Fs~fG~ 305 (872)
.... .......+++++.+.++||.
T Consensus 85 ~~~~------------~~~~~~~~~~~~~~~~~~g~ 108 (114)
T d2f9da1 85 RAFQ------------KMDTKKKEEQLKLLKEKYGI 108 (114)
T ss_dssp HHTT------------TSCHHHHHHHHHHHHHHHCC
T ss_pred chhh------------hhHHHHHHHHHHHHHHHhCC
Confidence 2111 12223456778888888773
No 18
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.7e-15 Score=139.19 Aligned_cols=100 Identities=20% Similarity=0.389 Sum_probs=84.2
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEEEEe--CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCcc
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE--TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGGA 356 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri--~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~~ 356 (872)
.++|||+|||.++++++|+++|++||.|++|++ ++..+|||||+|.+.++|.+|++.|||..|+|++|+|.++.+...
T Consensus 7 ~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~~~~ 86 (114)
T d2f9da1 7 NRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRA 86 (114)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCch
Confidence 578999999999999999999999999999987 456789999999999999999999999999999999999876432
Q ss_pred cchhhhcCChhccHHHHHHhhhccCC
Q 002874 357 RRNLMQQLNQELEQDEARGFRHQVGS 382 (872)
Q Consensus 357 r~~~v~ql~~~~~q~~~~~~f~~~Gs 382 (872)
. ........++++..+..++|.
T Consensus 87 ~----~~~~~~~~~~~~~~~~~~~g~ 108 (114)
T d2f9da1 87 F----QKMDTKKKEEQLKLLKEKYGI 108 (114)
T ss_dssp T----TTSCHHHHHHHHHHHHHHHCC
T ss_pred h----hhhHHHHHHHHHHHHHHHhCC
Confidence 2 233334455666777777774
No 19
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.58 E-value=8.4e-16 Score=137.29 Aligned_cols=82 Identities=23% Similarity=0.387 Sum_probs=77.0
Q ss_pred ccccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCcc
Q 002874 277 VNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGGA 356 (872)
Q Consensus 277 ~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~~ 356 (872)
...++|||+|||+++++++|+++|++||.|..++.++.+++||||+|.+.++|++|++.|||..|+|++|+|.|+.++..
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~~ 93 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGG 93 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCCC
Confidence 35679999999999999999999999999999988888999999999999999999999999999999999999999876
Q ss_pred cc
Q 002874 357 RR 358 (872)
Q Consensus 357 r~ 358 (872)
++
T Consensus 94 ~r 95 (96)
T d1fjca_ 94 TR 95 (96)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 20
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2.1e-15 Score=133.06 Aligned_cols=81 Identities=31% Similarity=0.381 Sum_probs=73.2
Q ss_pred ccccceeeeccCCccchhhHhhhhcccCCeEEEEeC---CCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCC
Q 002874 277 VNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRET---PHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRP 353 (872)
Q Consensus 277 ~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~---~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p 353 (872)
...++|||+|||.++++++|+++|+.||.|..|++. ...++||||+|.+.++|.+|++.|||..|.|+.|+|.|+++
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~~ 85 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT 85 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 345799999999999999999999999999999763 34578999999999999999999999999999999999987
Q ss_pred Cccc
Q 002874 354 GGAR 357 (872)
Q Consensus 354 ~~~r 357 (872)
...+
T Consensus 86 ~~~~ 89 (90)
T d2cqia1 86 PSSQ 89 (90)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 6544
No 21
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=3.3e-15 Score=133.04 Aligned_cols=80 Identities=26% Similarity=0.510 Sum_probs=72.9
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe------CCCcccEEEEEeCCHHHHHHHHHHh-cCcccccceeee
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT------ACKHRGFVMISYYDIRAARTAMRAL-QNKPLRRRKLDI 263 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~------~~~srG~AFVeF~~~e~A~~Ai~~L-ng~~l~gr~L~V 263 (872)
..++++|||+|||.++++++|+++|++||.|..|++ ++.++|||||+|.+.++|.+|++.| ++..+.|++|.|
T Consensus 5 ~~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V 84 (94)
T d2cpha1 5 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVL 84 (94)
T ss_dssp SSCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEE
Confidence 346788999999999999999999999999999984 3568999999999999999999998 899999999999
Q ss_pred eecCCCC
Q 002874 264 HFSIPKD 270 (872)
Q Consensus 264 ~~a~pk~ 270 (872)
+|+.++.
T Consensus 85 ~~A~~~~ 91 (94)
T d2cpha1 85 EWADSEV 91 (94)
T ss_dssp EECCCCC
T ss_pred EEcCCCC
Confidence 9997654
No 22
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.3e-15 Score=137.68 Aligned_cols=80 Identities=24% Similarity=0.424 Sum_probs=73.5
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
..++|||+|||+++++++|+++|++||.|.++++ ++.++|||||+|.+.++|++|++.|||..|.|++|+|+|++
T Consensus 17 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~ 96 (102)
T d2cpza1 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKR 96 (102)
T ss_dssp TTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 4568999999999999999999999999988864 35678999999999999999999999999999999999999
Q ss_pred CCccc
Q 002874 353 PGGAR 357 (872)
Q Consensus 353 p~~~r 357 (872)
++..+
T Consensus 97 ~k~~~ 101 (102)
T d2cpza1 97 SKNDS 101 (102)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 98765
No 23
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=5e-16 Score=136.88 Aligned_cols=79 Identities=24% Similarity=0.396 Sum_probs=72.4
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEEEEeC---CCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCc
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRET---PHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGG 355 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~---~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~ 355 (872)
.++|||+|||+++++++|+++|++||.|..+++. ..++|||||+|.+.++|++|++.|||..|+|++|+|++++++.
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~~ 87 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 87 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCTT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 4579999999999999999999999999999874 3357999999999999999999999999999999999999876
Q ss_pred cc
Q 002874 356 AR 357 (872)
Q Consensus 356 ~r 357 (872)
.|
T Consensus 88 ~R 89 (89)
T d1cvja2 88 ER 89 (89)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 24
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.3e-15 Score=132.65 Aligned_cols=80 Identities=21% Similarity=0.395 Sum_probs=72.9
Q ss_pred cccccceeeeccCCccchhhHhhhhcccCCeEEEEeC---CCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 276 DVNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRET---PHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 276 ~~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~---~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
....++|||+|||+++++++|+++|++||.|++|++. ..++|||||+|.+.++|.+|++.|||..|+|++|+|++++
T Consensus 8 ~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~ 87 (93)
T d2cq3a1 8 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 87 (93)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecC
Confidence 3456789999999999999999999999999999763 3468999999999999999999999999999999999999
Q ss_pred CCc
Q 002874 353 PGG 355 (872)
Q Consensus 353 p~~ 355 (872)
++.
T Consensus 88 ~r~ 90 (93)
T d2cq3a1 88 ARV 90 (93)
T ss_dssp SSC
T ss_pred cCC
Confidence 875
No 25
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.7e-15 Score=131.47 Aligned_cols=80 Identities=19% Similarity=0.455 Sum_probs=72.5
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe---CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecC
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT---ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 267 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~---~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~ 267 (872)
+.+.++|||+|||.++++++|+++|++||+|.+|++ ....+|||||+|.+.++|++|++.|+|..+.|++|+|.|+.
T Consensus 5 ~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~ 84 (90)
T d2cqia1 5 DGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 84 (90)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 355789999999999999999999999999999874 23468999999999999999999999999999999999997
Q ss_pred CCC
Q 002874 268 PKD 270 (872)
Q Consensus 268 pk~ 270 (872)
++.
T Consensus 85 ~~~ 87 (90)
T d2cqia1 85 TPS 87 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
No 26
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=2.2e-15 Score=134.12 Aligned_cols=79 Identities=25% Similarity=0.483 Sum_probs=72.5
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe------CCCCccEEEEEECCHHHHHHHHHHh-CCceeCCcEEEEEe
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE------TPHKRHHKFIEFYDVRAAEAALRAL-NRSDINGKRIKLEP 350 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri------~~~skG~gFVeF~~~e~A~kAl~~L-nG~~l~Gr~L~V~~ 350 (872)
...+|||+|||+++++++|+++|++||.|.+|++ ++.++|||||+|.+.++|.+|++.| ||..|.|++|+|+|
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~ 86 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 86 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEE
Confidence 4578999999999999999999999999999986 2457899999999999999999998 89999999999999
Q ss_pred cCCCcc
Q 002874 351 SRPGGA 356 (872)
Q Consensus 351 s~p~~~ 356 (872)
|.+...
T Consensus 87 A~~~~~ 92 (94)
T d2cpha1 87 ADSEVT 92 (94)
T ss_dssp CCCCCC
T ss_pred cCCCCC
Confidence 987653
No 27
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.57 E-value=4.1e-15 Score=129.19 Aligned_cols=77 Identities=18% Similarity=0.367 Sum_probs=71.7
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccc-cceeeeeecC
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLR-RRKLDIHFSI 267 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~-gr~L~V~~a~ 267 (872)
..|+++|||+|||.++++++|+++|++||+|..|++....+|||||+|.+.++|..|++.|+|..+. |++|.|.|++
T Consensus 5 ~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 5 QPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp CSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 4578999999999999999999999999999999987778899999999999999999999999884 6899999985
No 28
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.57 E-value=2.9e-15 Score=130.20 Aligned_cols=76 Identities=24% Similarity=0.327 Sum_probs=71.2
Q ss_pred ccccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCcee-CCcEEEEEecC
Q 002874 277 VNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDI-NGKRIKLEPSR 352 (872)
Q Consensus 277 ~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l-~Gr~L~V~~s~ 352 (872)
.+.++|||+|||..+++++|+++|++||.|+.|++...++|||||+|.+.++|.+|++.|||..| +|++|+|+||+
T Consensus 6 pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 6 PPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp SCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 34679999999999999999999999999999999878889999999999999999999999988 57999999996
No 29
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=7e-16 Score=140.44 Aligned_cols=77 Identities=27% Similarity=0.487 Sum_probs=71.5
Q ss_pred ccceeeeccCC-ccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCc
Q 002874 279 QGTLVVFNLDA-SVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGG 355 (872)
Q Consensus 279 ~~tLfV~NLp~-~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~ 355 (872)
..+|||+||++ .+|+++|+++|++||.|+.|++...++|||||+|.+.++|.+|++.|||..|.|++|+|+|++...
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~~ 79 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 79 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCCC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 46899999965 599999999999999999999988889999999999999999999999999999999999987553
No 30
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=2.5e-15 Score=129.11 Aligned_cols=73 Identities=23% Similarity=0.408 Sum_probs=68.4
Q ss_pred cceeeeccCCccchhhHhhhhcccCCeEEEEe----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 280 GTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 280 ~tLfV~NLp~~~teedLre~Fs~fG~V~~vri----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
++|||+|||+++++++|+++|++||.|.++++ +++++|||||+|.+.++|++|++.|||..++|++|+|+++.
T Consensus 1 grl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 1 GKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp CEEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 46999999999999999999999999999987 35668899999999999999999999999999999999985
No 31
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.57 E-value=1.7e-15 Score=130.78 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=66.8
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCC
Q 002874 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 268 (872)
Q Consensus 194 srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~p 268 (872)
.+||||+|||+++|+++|+++|++||.|..+.+ .++++|||||+|.+.++|++|++.|+|..+.|++|.|+++.|
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 379999999999999999999999999976652 467899999999999999999999999999999999999976
No 32
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=2.8e-15 Score=135.44 Aligned_cols=80 Identities=16% Similarity=0.372 Sum_probs=73.3
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
.+.++|||+|||+++++++|+++|++||.|.++++ ++.++|||||+|.+.++|++|++.|+|..|.|++|+|+|+
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 35678999999999999999999999999988863 4678999999999999999999999999999999999999
Q ss_pred CCCCC
Q 002874 267 IPKDN 271 (872)
Q Consensus 267 ~pk~~ 271 (872)
.++.+
T Consensus 96 ~~k~~ 100 (102)
T d2cpza1 96 RSKND 100 (102)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 87764
No 33
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=7.3e-15 Score=130.41 Aligned_cols=80 Identities=23% Similarity=0.396 Sum_probs=72.8
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe---CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecC
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT---ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 267 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~---~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~ 267 (872)
....++|||+|||+++++++|+++|++||+|..|++ ...++|||||+|.+.++|++|++.|++..+.|++|+|+|+.
T Consensus 8 ~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~ 87 (93)
T d2cq3a1 8 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 87 (93)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecC
Confidence 445688999999999999999999999999999874 34468999999999999999999999999999999999998
Q ss_pred CCC
Q 002874 268 PKD 270 (872)
Q Consensus 268 pk~ 270 (872)
++.
T Consensus 88 ~r~ 90 (93)
T d2cq3a1 88 ARV 90 (93)
T ss_dssp SSC
T ss_pred cCC
Confidence 764
No 34
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.56 E-value=1.5e-15 Score=131.11 Aligned_cols=74 Identities=20% Similarity=0.249 Sum_probs=66.6
Q ss_pred cceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCC
Q 002874 280 GTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRP 353 (872)
Q Consensus 280 ~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p 353 (872)
+||||+|||+++|+++|+++|++||.|..+.+ .++++|||||+|.+.++|++|++.|||..++|++|+|++++|
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 58999999999999999999999999977644 356789999999999999999999999999999999999987
No 35
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=2.6e-15 Score=136.92 Aligned_cols=78 Identities=13% Similarity=0.253 Sum_probs=72.4
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCC
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 269 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk 269 (872)
.+.+++|||+|||+++++++|+++|++||+|..|.+ .+++|||||+|.+.++|++|++.|+|..|.|++|+|+|+...
T Consensus 7 ~r~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l-~~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~ 84 (111)
T d1whxa_ 7 GRSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLL-PEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIG 84 (111)
T ss_dssp SEEEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEEC-CSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETT
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhhccCCccEEEe-eccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCC
Confidence 456789999999999999999999999999999976 578999999999999999999999999999999999998543
No 36
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.56 E-value=1.8e-15 Score=135.05 Aligned_cols=81 Identities=22% Similarity=0.367 Sum_probs=76.2
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCCC
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 270 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk~ 270 (872)
.++.++|||+|||.++|+++|+++|++||.|..++..++++|||||+|.+.++|++|++.|++..|.|++|.|.|+.++.
T Consensus 13 ~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~ 92 (96)
T d1fjca_ 13 VRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKG 92 (96)
T ss_dssp TTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSC
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCC
Confidence 45679999999999999999999999999999888888999999999999999999999999999999999999998765
Q ss_pred C
Q 002874 271 N 271 (872)
Q Consensus 271 ~ 271 (872)
.
T Consensus 93 ~ 93 (96)
T d1fjca_ 93 G 93 (96)
T ss_dssp C
T ss_pred C
Confidence 4
No 37
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3.3e-15 Score=131.59 Aligned_cols=79 Identities=23% Similarity=0.470 Sum_probs=72.4
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEE-----eCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecC
Q 002874 193 PSRTLFVRNINSNVEDLELRSLFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 267 (872)
Q Consensus 193 ~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~-----~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~ 267 (872)
..++|||+|||+++++++|+++|++||.|..+. ..+.++|||||+|.+.++|++|++.|++..|.|++|.|+++.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 468899999999999999999999999999886 246789999999999999999999999999999999999997
Q ss_pred CCCC
Q 002874 268 PKDN 271 (872)
Q Consensus 268 pk~~ 271 (872)
++..
T Consensus 84 ~~~~ 87 (90)
T d1x5sa1 84 KSSD 87 (90)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6643
No 38
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=4.1e-15 Score=133.42 Aligned_cols=79 Identities=27% Similarity=0.417 Sum_probs=72.8
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
..++|||+|||+++++++|+++|++||.|.+|++ +++++|||||+|.+.++|++|++.|||..|+|++|+|.+++
T Consensus 7 ~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~ 86 (99)
T d1whwa_ 7 GSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPST 86 (99)
T ss_dssp SCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECC
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 3568999999999999999999999999999986 35678999999999999999999999999999999999999
Q ss_pred CCcc
Q 002874 353 PGGA 356 (872)
Q Consensus 353 p~~~ 356 (872)
++..
T Consensus 87 ~~~~ 90 (99)
T d1whwa_ 87 IKKE 90 (99)
T ss_dssp CCST
T ss_pred CCCc
Confidence 8654
No 39
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2.5e-15 Score=129.72 Aligned_cols=73 Identities=27% Similarity=0.338 Sum_probs=68.3
Q ss_pred ceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCC
Q 002874 281 TLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRP 353 (872)
Q Consensus 281 tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p 353 (872)
+|||+|||+.+|+++|+++|++||.|.+|++ +++++|||||+|.+.++|.+|++.|||..+.|++|+|.|++.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 6999999999999999999999999999976 355689999999999999999999999999999999999863
No 40
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=8.2e-15 Score=130.51 Aligned_cols=79 Identities=18% Similarity=0.335 Sum_probs=72.5
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe--CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCC
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT--ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 268 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~--~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~p 268 (872)
..++++|||+|||+++++++|+++|++||.|..+.+ ....++||||+|.+.++|++|++.|++..|.|++|+|+|+.+
T Consensus 11 ~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~ 90 (95)
T d1x4aa1 11 GNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRS 90 (95)
T ss_dssp CCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccC
Confidence 356789999999999999999999999999999874 456789999999999999999999999999999999999865
Q ss_pred C
Q 002874 269 K 269 (872)
Q Consensus 269 k 269 (872)
.
T Consensus 91 ~ 91 (95)
T d1x4aa1 91 G 91 (95)
T ss_dssp C
T ss_pred C
Confidence 3
No 41
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.2e-15 Score=138.03 Aligned_cols=81 Identities=23% Similarity=0.412 Sum_probs=73.4
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeee
Q 002874 189 YGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDI 263 (872)
Q Consensus 189 ~~e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V 263 (872)
..+++.++|||+|||.++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|++..|.|++|+|
T Consensus 3 ~~~~~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V 82 (104)
T d1p1ta_ 3 AVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 82 (104)
T ss_dssp CSHHHHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEE
T ss_pred CCCCCCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEE
Confidence 34456689999999999999999999999999999873 4668899999999999999999999999999999999
Q ss_pred eecCCC
Q 002874 264 HFSIPK 269 (872)
Q Consensus 264 ~~a~pk 269 (872)
+|+.++
T Consensus 83 ~~a~~~ 88 (104)
T d1p1ta_ 83 DNAASE 88 (104)
T ss_dssp EETTCT
T ss_pred EECCCC
Confidence 998764
No 42
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=5.1e-15 Score=129.32 Aligned_cols=79 Identities=20% Similarity=0.310 Sum_probs=72.4
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCCCCC
Q 002874 193 PSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNP 272 (872)
Q Consensus 193 ~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk~~~ 272 (872)
..++|||+|||+++++++|+++|++||.|..+.+ .+++|||||+|.+.++|.+|+..|+|..|.|++|.|+|+.|++..
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~-~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~~~ 85 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERV-KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDKD 85 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEE-EECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEE-ccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCCCC
Confidence 3589999999999999999999999999877754 568999999999999999999999999999999999999887643
No 43
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=4.5e-15 Score=129.25 Aligned_cols=75 Identities=24% Similarity=0.449 Sum_probs=68.0
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEEEEeC--------CCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCC
Q 002874 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTA--------CKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 268 (872)
Q Consensus 197 LfV~NLP~~vteeeLr~lFs~fG~I~~v~~~--------~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~p 268 (872)
|||+|||.++|+++|+++|++||+|.+|++. ..++|||||+|.+.++|++|++.|+|..+.|++|.|+|+.+
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 8999999999999999999999999998731 23689999999999999999999999999999999999865
Q ss_pred CCC
Q 002874 269 KDN 271 (872)
Q Consensus 269 k~~ 271 (872)
+..
T Consensus 81 ~~k 83 (85)
T d2cpfa1 81 ATK 83 (85)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 44
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=2.1e-15 Score=132.86 Aligned_cols=81 Identities=26% Similarity=0.536 Sum_probs=73.3
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
..++|||+|||+++++++|+++|++||.|..+.+ .+.++|||||+|.+.++|++|++.|||..|.|++|+|+++.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 3567999999999999999999999999999864 35678999999999999999999999999999999999998
Q ss_pred CCcccc
Q 002874 353 PGGARR 358 (872)
Q Consensus 353 p~~~r~ 358 (872)
++...+
T Consensus 84 ~~~~~r 89 (90)
T d1x5sa1 84 KSSDNR 89 (90)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 876543
No 45
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.55 E-value=4.5e-15 Score=141.10 Aligned_cols=79 Identities=29% Similarity=0.460 Sum_probs=72.5
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCC
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRP 353 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p 353 (872)
.++|||+|||+++++++|+++|++||.|++|++ ++.++|||||+|.+.++|.+|++.|||..|+|++|+|+++++
T Consensus 42 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~~ 121 (139)
T d1u6fa1 42 LRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAAS 121 (139)
T ss_dssp TSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESSC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 468999999999999999999999999999976 356789999999999999999999999999999999999987
Q ss_pred Cccc
Q 002874 354 GGAR 357 (872)
Q Consensus 354 ~~~r 357 (872)
+..+
T Consensus 122 ~~~~ 125 (139)
T d1u6fa1 122 GHQR 125 (139)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 46
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=1e-14 Score=129.97 Aligned_cols=81 Identities=21% Similarity=0.458 Sum_probs=72.0
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhc------Ccccccc
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQ------NKPLRRR 259 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Ln------g~~l~gr 259 (872)
....++|||+|||+++|+++|+++|++||+|.++.+ .+.++|||||+|.+.++|++|++.|+ |..+.|+
T Consensus 5 ~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr 84 (98)
T d1x4ha1 5 VTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGR 84 (98)
T ss_dssp CCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSC
T ss_pred CCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCE
Confidence 445789999999999999999999999999998873 45688999999999999999999886 5678999
Q ss_pred eeeeeecCCCCC
Q 002874 260 KLDIHFSIPKDN 271 (872)
Q Consensus 260 ~L~V~~a~pk~~ 271 (872)
+|.|+|+.++++
T Consensus 85 ~l~v~~a~~k~~ 96 (98)
T d1x4ha1 85 QLKVDLAVTRDE 96 (98)
T ss_dssp EEEEECCCCCCC
T ss_pred EEEEEECCCCCc
Confidence 999999987654
No 47
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.55 E-value=9.3e-15 Score=138.88 Aligned_cols=81 Identities=23% Similarity=0.468 Sum_probs=73.6
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeee
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 265 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~ 265 (872)
....++|||+|||.++|+++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|+|..|.|++|+|+|
T Consensus 39 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~ 118 (139)
T d1u6fa1 39 PDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVAL 118 (139)
T ss_dssp TTTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 345689999999999999999999999999999874 467899999999999999999999999999999999999
Q ss_pred cCCCCC
Q 002874 266 SIPKDN 271 (872)
Q Consensus 266 a~pk~~ 271 (872)
+.++..
T Consensus 119 a~~~~~ 124 (139)
T d1u6fa1 119 AASGHQ 124 (139)
T ss_dssp SSCCCC
T ss_pred cCCCCC
Confidence 976553
No 48
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.4e-15 Score=130.48 Aligned_cols=76 Identities=18% Similarity=0.401 Sum_probs=71.0
Q ss_pred cceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCC
Q 002874 280 GTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPG 354 (872)
Q Consensus 280 ~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~ 354 (872)
.+|||+|||..+|+++|+++|++||+|.+|++ ++.++|||||+|.+.++|++|++.|||..|+|++|+|+++.++
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 37999999999999999999999999999976 3567899999999999999999999999999999999999876
Q ss_pred c
Q 002874 355 G 355 (872)
Q Consensus 355 ~ 355 (872)
.
T Consensus 82 ~ 82 (85)
T d2u2fa_ 82 A 82 (85)
T ss_dssp C
T ss_pred C
Confidence 4
No 49
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.54 E-value=7.6e-15 Score=127.98 Aligned_cols=75 Identities=24% Similarity=0.426 Sum_probs=68.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCccccc--ceeeee
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRR--RKLDIH 264 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~g--r~L~V~ 264 (872)
...++|||+|||.++++++|+++|++||+|..|++ +++++|||||+|.+.++|++|++.|++..+.| ++|+|+
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~ 83 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVR 83 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEE
Confidence 35678999999999999999999999999999873 46789999999999999999999999999976 889999
Q ss_pred ec
Q 002874 265 FS 266 (872)
Q Consensus 265 ~a 266 (872)
||
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 50
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=3.7e-15 Score=129.86 Aligned_cols=74 Identities=22% Similarity=0.407 Sum_probs=67.6
Q ss_pred eeeeccCCccchhhHhhhhcccCCeEEEEeC-----C---CCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCC
Q 002874 282 LVVFNLDASVSNDDLRQIFGAYGEVKEIRET-----P---HKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRP 353 (872)
Q Consensus 282 LfV~NLp~~~teedLre~Fs~fG~V~~vri~-----~---~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p 353 (872)
|||+|||+++|+++|+++|++||.|.+|++. + .++|||||+|.+.++|++|++.|||..|+|++|+|+++++
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7999999999999999999999999998752 1 2479999999999999999999999999999999999976
Q ss_pred Cc
Q 002874 354 GG 355 (872)
Q Consensus 354 ~~ 355 (872)
..
T Consensus 81 ~~ 82 (85)
T d2cpfa1 81 AT 82 (85)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 51
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=9.2e-15 Score=128.20 Aligned_cols=77 Identities=29% Similarity=0.414 Sum_probs=70.3
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEE-eCCCcccEEEEEeCCHHHHHHHHHHhcCccc-ccceeeeeecCC
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLY-TACKHRGFVMISYYDIRAARTAMRALQNKPL-RRRKLDIHFSIP 268 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~-~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l-~gr~L~V~~a~p 268 (872)
.|+++|||+|||.++++++|+++|++||.|..+. ...+.+|||||+|.+.++|.+|+..|+|..+ .|++|+|.|+++
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~ 86 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKS 86 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSS
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCC
Confidence 4689999999999999999999999999998765 4667899999999999999999999999988 589999999864
No 52
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=5.5e-15 Score=132.18 Aligned_cols=76 Identities=22% Similarity=0.386 Sum_probs=71.3
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCc
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGG 355 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~ 355 (872)
.++|||+|||..+++++|+++|++||.|++|++.. .+|||||+|.+.++|++|++.|||..|+|++|+|.|++++.
T Consensus 18 ~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~-~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~p 93 (96)
T d1x4ga1 18 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFP-EKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 93 (96)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEET-TTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEe-cceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 56899999999999999999999999999999864 48999999999999999999999999999999999998754
No 53
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=5.1e-15 Score=129.32 Aligned_cols=76 Identities=18% Similarity=0.394 Sum_probs=70.7
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCC
Q 002874 195 RTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 269 (872)
Q Consensus 195 rtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk 269 (872)
.+|||+|||.++|+++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|++..+.|++|.|+|+.+.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 47999999999999999999999999999973 4678999999999999999999999999999999999999765
Q ss_pred C
Q 002874 270 D 270 (872)
Q Consensus 270 ~ 270 (872)
.
T Consensus 82 ~ 82 (85)
T d2u2fa_ 82 A 82 (85)
T ss_dssp C
T ss_pred C
Confidence 4
No 54
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=8.8e-15 Score=130.32 Aligned_cols=77 Identities=30% Similarity=0.487 Sum_probs=71.3
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEeC--CCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRET--PHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPG 354 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~--~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~ 354 (872)
..++|||+|||+++++++|+++|++||.|+.+++. ...++||||+|.+.++|++|++.|||+.|.|++|+|+|+++.
T Consensus 13 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~~ 91 (95)
T d1x4aa1 13 NDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSG 91 (95)
T ss_dssp CSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCCC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccCC
Confidence 45689999999999999999999999999999763 456899999999999999999999999999999999999875
No 55
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=7.5e-15 Score=131.83 Aligned_cols=75 Identities=20% Similarity=0.357 Sum_probs=68.8
Q ss_pred cccceeeeccC-CccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCc
Q 002874 278 NQGTLVVFNLD-ASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGG 355 (872)
Q Consensus 278 ~~~tLfV~NLp-~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~ 355 (872)
...+|||+||+ ..+++++|+++|++||.|.+|++ ++|||||+|.+.++|++|++.|||+.|.|++|+|++++++.
T Consensus 14 ~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i---~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~~ 89 (98)
T d1wf2a_ 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV---HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPK 89 (98)
T ss_dssp CCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE---ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSCC
T ss_pred CCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE---eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 45689999997 56788899999999999999998 58999999999999999999999999999999999998654
No 56
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=5e-15 Score=130.33 Aligned_cols=77 Identities=17% Similarity=0.355 Sum_probs=70.8
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe---CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCCC
Q 002874 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT---ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 270 (872)
Q Consensus 194 srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~---~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk~ 270 (872)
..+|||+|||+++++++|+++|++||.|..+++ ...++|||||+|.+.++|++|++.|+|..+.|++|.|.++.++.
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~~ 87 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 87 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCTT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 468999999999999999999999999999884 34468999999999999999999999999999999999998654
No 57
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=5.6e-15 Score=127.44 Aligned_cols=72 Identities=17% Similarity=0.357 Sum_probs=68.0
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecC
Q 002874 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 267 (872)
Q Consensus 196 tLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~ 267 (872)
+|||+|||+++|+++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|+|..+.|++|+|.|+.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 6999999999999999999999999999984 46678999999999999999999999999999999999984
No 58
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=9.5e-15 Score=130.58 Aligned_cols=76 Identities=14% Similarity=0.319 Sum_probs=71.0
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCC
Q 002874 193 PSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 269 (872)
Q Consensus 193 ~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk 269 (872)
..++|||+|||.++++++|+++|++||+|.+|++. +.+|||||+|.+.++|++|+..|+|..|.|++|+|.|+.++
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~-~~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~ 92 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF-PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 92 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEE-TTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEE-ecceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 46899999999999999999999999999999864 56999999999999999999999999999999999998654
No 59
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=7e-15 Score=127.57 Aligned_cols=72 Identities=22% Similarity=0.436 Sum_probs=67.1
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeee
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDI 263 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V 263 (872)
.++++|||+|||+++|+++|+++|++||.|.+|++ +++++|||||+|.+.++|++|++.|++..|.|++|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 46789999999999999999999999999999873 3678999999999999999999999999999999987
No 60
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.3e-14 Score=131.92 Aligned_cols=76 Identities=25% Similarity=0.364 Sum_probs=70.9
Q ss_pred CcEEEEcCCCC-CCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCC
Q 002874 194 SRTLFVRNINS-NVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 269 (872)
Q Consensus 194 srtLfV~NLP~-~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk 269 (872)
+++|||+|||+ .+|+++|+++|++||+|..|++....+|||||+|.+.++|.+|++.|+|..|.|++|+|+|+...
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~ 78 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQ 78 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 58999999965 69999999999999999999987778999999999999999999999999999999999998654
No 61
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=8.5e-15 Score=125.77 Aligned_cols=72 Identities=22% Similarity=0.433 Sum_probs=67.9
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEe----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecC
Q 002874 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYT----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 267 (872)
Q Consensus 196 tLfV~NLP~~vteeeLr~lFs~fG~I~~v~~----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~ 267 (872)
+|||+|||+++++++|+++|++||+|.+|++ .++++|||||+|.+.++|++|++.|+|..+.|++|+|+++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 6999999999999999999999999999984 56788999999999999999999999999999999999874
No 62
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.53 E-value=6.3e-15 Score=128.96 Aligned_cols=76 Identities=22% Similarity=0.397 Sum_probs=67.5
Q ss_pred cccceeeeccCCccch-hhHhhhhcccCCeEEEEe------CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEe
Q 002874 278 NQGTLVVFNLDASVSN-DDLRQIFGAYGEVKEIRE------TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEP 350 (872)
Q Consensus 278 ~~~tLfV~NLp~~~te-edLre~Fs~fG~V~~vri------~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~ 350 (872)
..++|||+|||+++++ ++|+++|++||.|.+|++ +++++|||||+|.+.++|++|++ |||..|+|++|+|++
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 4679999999999865 569999999999999976 24568999999999999999996 999999999999999
Q ss_pred cCCC
Q 002874 351 SRPG 354 (872)
Q Consensus 351 s~p~ 354 (872)
+.++
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 63
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=7.4e-15 Score=132.89 Aligned_cols=82 Identities=26% Similarity=0.356 Sum_probs=72.4
Q ss_pred ccccccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEE
Q 002874 275 KDVNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLE 349 (872)
Q Consensus 275 ~~~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~ 349 (872)
++...++|||+|||+.+++++|+++|++||.|.+|++ +++++|||||+|.+.++|++|++.+|+ .|+|++|+|+
T Consensus 6 ~d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~ 84 (103)
T d2cqda1 6 KDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVN 84 (103)
T ss_dssp CSCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEE
T ss_pred CCCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEE
Confidence 3445578999999999999999999999999999986 356789999999999999999998876 7999999999
Q ss_pred ecCCCccc
Q 002874 350 PSRPGGAR 357 (872)
Q Consensus 350 ~s~p~~~r 357 (872)
++.++...
T Consensus 85 ~a~~~~~p 92 (103)
T d2cqda1 85 LAYLGAKP 92 (103)
T ss_dssp ESTTTCCC
T ss_pred EcCCCCCC
Confidence 99876543
No 64
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.1e-14 Score=127.23 Aligned_cols=73 Identities=25% Similarity=0.401 Sum_probs=67.1
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCccccc--ceeeeeec
Q 002874 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRR--RKLDIHFS 266 (872)
Q Consensus 194 srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~g--r~L~V~~a 266 (872)
+++|||+|||+++|+++|+++|++||+|.++++ ++.++|||||+|.+.++|++|++.|+|..+.| ++|.|.||
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 578999999999999999999999999999874 45789999999999999999999999999987 56899885
No 65
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=4.3e-15 Score=130.60 Aligned_cols=79 Identities=24% Similarity=0.441 Sum_probs=72.9
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCCCC
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDN 271 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk~~ 271 (872)
..+++|||+|||+++|+++|+++|++||+|.+|++...++|||||+|.+.++|++|+. ++..|.|++|.|.++.++..
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~ 80 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHN 80 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCC
Confidence 4579999999999999999999999999999999888899999999999999999985 78889999999999987654
Q ss_pred C
Q 002874 272 P 272 (872)
Q Consensus 272 ~ 272 (872)
.
T Consensus 81 ~ 81 (88)
T d1wf0a_ 81 S 81 (88)
T ss_dssp C
T ss_pred C
Confidence 3
No 66
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=2.8e-15 Score=135.42 Aligned_cols=77 Identities=22% Similarity=0.434 Sum_probs=70.2
Q ss_pred ccccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 277 VNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 277 ~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
...++|||+|||+++++++|+++|+.||.|.+|++ +++++|||||+|.+.++|.+|++ |||..|.|+.|+|+++
T Consensus 16 ~~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a 94 (101)
T d2cq4a1 16 RDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQAS 94 (101)
T ss_dssp HHHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEEC
Confidence 34578999999999999999999999999999976 35679999999999999999995 9999999999999998
Q ss_pred CCC
Q 002874 352 RPG 354 (872)
Q Consensus 352 ~p~ 354 (872)
.++
T Consensus 95 ~~~ 97 (101)
T d2cq4a1 95 QAE 97 (101)
T ss_dssp HHH
T ss_pred CCC
Confidence 654
No 67
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.53 E-value=7.7e-15 Score=127.93 Aligned_cols=74 Identities=27% Similarity=0.446 Sum_probs=68.0
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCC--cEEEEEe
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDING--KRIKLEP 350 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~G--r~L~V~~ 350 (872)
..++|||+|||.++++++|+++|++||.|.++++ +++++|||||+|.+.++|.+|++.|||..+.| ++|+|+|
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~ 84 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEE
Confidence 4567999999999999999999999999999975 35678999999999999999999999999987 8899998
Q ss_pred c
Q 002874 351 S 351 (872)
Q Consensus 351 s 351 (872)
|
T Consensus 85 A 85 (85)
T d1b7fa2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 68
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=9.9e-15 Score=131.51 Aligned_cols=78 Identities=13% Similarity=0.252 Sum_probs=70.8
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
+...++|||+|||+++++++|+++|++||+|..+.+ .+.++|||||+|.+.++|++|++.|||+.|.|+++.|.++
T Consensus 15 ~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 15 EQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp CCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 445689999999999999999999999999988762 4567899999999999999999999999999999999887
Q ss_pred CC
Q 002874 267 IP 268 (872)
Q Consensus 267 ~p 268 (872)
.|
T Consensus 95 ~P 96 (101)
T d1x5oa1 95 EP 96 (101)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 69
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.7e-14 Score=130.45 Aligned_cols=81 Identities=25% Similarity=0.411 Sum_probs=71.8
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeee
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 265 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~ 265 (872)
+...++|||+|||+++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.+++ .|.|++|.|++
T Consensus 7 d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~ 85 (103)
T d2cqda1 7 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNL 85 (103)
T ss_dssp SCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEE
T ss_pred CCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEE
Confidence 345688999999999999999999999999999984 367899999999999999999998875 69999999999
Q ss_pred cCCCCCC
Q 002874 266 SIPKDNP 272 (872)
Q Consensus 266 a~pk~~~ 272 (872)
+..+..+
T Consensus 86 a~~~~~p 92 (103)
T d2cqda1 86 AYLGAKP 92 (103)
T ss_dssp STTTCCC
T ss_pred cCCCCCC
Confidence 8765543
No 70
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.9e-15 Score=130.64 Aligned_cols=77 Identities=27% Similarity=0.343 Sum_probs=69.7
Q ss_pred cceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCc-eeCCcEEEEEecCCCccc
Q 002874 280 GTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRS-DINGKRIKLEPSRPGGAR 357 (872)
Q Consensus 280 ~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~-~l~Gr~L~V~~s~p~~~r 357 (872)
.+|||+|||.++|+++|+++|++||.|..+++. .++|||||+|.+.++|++|++.|||. .|+|++|+|+|+.|+..|
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~-~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~r 79 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVL-LKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLR 79 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEE-EETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEe-cccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCcC
Confidence 379999999999999999999999998776553 46899999999999999999999996 699999999999997654
No 71
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.1e-14 Score=126.24 Aligned_cols=71 Identities=28% Similarity=0.526 Sum_probs=66.1
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEE
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKL 348 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V 348 (872)
..++|||+|||+.+|+++|+++|++||.|.+|++ +++++|||||+|.+.++|++|++.|||..|+|++|+|
T Consensus 8 ~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 8 PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp GGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 4678999999999999999999999999999876 3566899999999999999999999999999999987
No 72
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=8.7e-15 Score=127.77 Aligned_cols=74 Identities=28% Similarity=0.420 Sum_probs=67.5
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCC--cEEEEEe
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDING--KRIKLEP 350 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~G--r~L~V~~ 350 (872)
..++|||+|||+.+|+++|+++|++||.|+++++ ++.++|||||+|.+.++|++|++.|||..+.| ++|+|+|
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 3567999999999999999999999999999976 35678999999999999999999999999998 5699988
Q ss_pred c
Q 002874 351 S 351 (872)
Q Consensus 351 s 351 (872)
|
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 73
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=8.2e-15 Score=129.50 Aligned_cols=79 Identities=23% Similarity=0.576 Sum_probs=71.2
Q ss_pred CCCcEEEEcCCCCCCCHHHHHH----HhhccCCeEEEEeC--CCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeee
Q 002874 192 HPSRTLFVRNINSNVEDLELRS----LFEQYGDIRTLYTA--CKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 265 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~----lFs~fG~I~~v~~~--~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~ 265 (872)
+|++||||+|||.+++++||++ +|++||+|.+|++. ++++|||||+|.+.++|.+|++.++|..+.|++|.|.|
T Consensus 1 ~P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ 80 (91)
T d1nu4a_ 1 RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQY 80 (91)
T ss_dssp CCCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 4789999999999999999864 68999999999853 45789999999999999999999999999999999999
Q ss_pred cCCCC
Q 002874 266 SIPKD 270 (872)
Q Consensus 266 a~pk~ 270 (872)
+.++.
T Consensus 81 ak~~~ 85 (91)
T d1nu4a_ 81 AKTDS 85 (91)
T ss_dssp CSSCC
T ss_pred eCCCc
Confidence 97654
No 74
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.52 E-value=6.2e-15 Score=134.37 Aligned_cols=76 Identities=20% Similarity=0.290 Sum_probs=71.0
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPG 354 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~ 354 (872)
..++|||+|||+++++++|+++|++||.|..|.+. +.++||||+|.+.++|++|++.|||..|.|++|+|+|+...
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~-~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~ 84 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLP-EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIG 84 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECC-SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETT
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEee-ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCC
Confidence 45789999999999999999999999999999984 57899999999999999999999999999999999998654
No 75
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=4.6e-15 Score=128.62 Aligned_cols=76 Identities=22% Similarity=0.364 Sum_probs=68.6
Q ss_pred eeeeccCCccchhhHhhhhcccCCeEEE-Ee-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCc
Q 002874 282 LVVFNLDASVSNDDLRQIFGAYGEVKEI-RE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGG 355 (872)
Q Consensus 282 LfV~NLp~~~teedLre~Fs~fG~V~~v-ri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~ 355 (872)
|||+|||+++++++|+++|++||.|..+ ++ +++++|||||+|.+.++|++|++.|+|..|+|++|+|+++.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999998654 33 35678999999999999999999999999999999999999876
Q ss_pred cc
Q 002874 356 AR 357 (872)
Q Consensus 356 ~r 357 (872)
.+
T Consensus 81 ~k 82 (83)
T d1x5ta1 81 SK 82 (83)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 76
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=9e-15 Score=127.70 Aligned_cols=77 Identities=25% Similarity=0.279 Sum_probs=71.0
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCcc
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGGA 356 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~~ 356 (872)
.++|||+|||+++++++|+++|++||.|..+++ .+.+|||||+|.+.++|.+|+..|||..|.|++|+|+|++|+..
T Consensus 8 ~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~-~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~~ 84 (86)
T d2cpda1 8 VKILYVRNLMLSTSEEMIEKEFNNIKPGAVERV-KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDK 84 (86)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEE-EECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHhhcccceeeeEEE-ccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCCC
Confidence 468999999999999999999999999887776 35789999999999999999999999999999999999998754
No 77
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.52 E-value=1.3e-14 Score=127.07 Aligned_cols=76 Identities=32% Similarity=0.555 Sum_probs=71.0
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCCC
Q 002874 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 270 (872)
Q Consensus 194 srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk~ 270 (872)
.++|||+|||.++++++|+++|++||+|.+|++. +.+|||||+|.+.++|++|++.|+|..+.|++|+|+|+.++.
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~-~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-KDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEE-TTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeeee-cccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 4689999999999999999999999999999764 678999999999999999999999999999999999997654
No 78
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.7e-14 Score=127.56 Aligned_cols=78 Identities=14% Similarity=0.307 Sum_probs=69.9
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
...++|||+|||+++|+++|+++|++||+|.+|++ ++.++|||||+|.+.++|++|++.. ..|.|+.|.|+++
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~--~~l~Gr~i~v~~a 83 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR--HMIDGRWCDCKLP 83 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSC--EEETTEEEEEECC
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcC--CccCCEEeEEEeC
Confidence 45789999999999999999999999999999873 5788999999999999999999854 4789999999999
Q ss_pred CCCCC
Q 002874 267 IPKDN 271 (872)
Q Consensus 267 ~pk~~ 271 (872)
.++..
T Consensus 84 ~~k~~ 88 (90)
T d2cqga1 84 NSKQS 88 (90)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 87654
No 79
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.1e-14 Score=127.79 Aligned_cols=77 Identities=26% Similarity=0.334 Sum_probs=69.9
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEE-eCCCCccEEEEEECCHHHHHHHHHHhCCcee-CCcEEEEEecCCC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIR-ETPHKRHHKFIEFYDVRAAEAALRALNRSDI-NGKRIKLEPSRPG 354 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vr-i~~~skG~gFVeF~~~e~A~kAl~~LnG~~l-~Gr~L~V~~s~p~ 354 (872)
+.++|||+|||.++++++|+++|++||.|..+. ..++.++||||+|.+.++|.+|+..|||..| +|+.|+|+|+++.
T Consensus 9 Ps~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~~ 87 (88)
T d2adca2 9 PSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKST 87 (88)
T ss_dssp SCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSSC
T ss_pred CCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCCC
Confidence 357899999999999999999999999998774 4667789999999999999999999999988 5899999999864
No 80
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=3.8e-15 Score=128.65 Aligned_cols=76 Identities=22% Similarity=0.350 Sum_probs=68.6
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCc-ccccceeeeeecCCCCC
Q 002874 195 RTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNK-PLRRRKLDIHFSIPKDN 271 (872)
Q Consensus 195 rtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~-~l~gr~L~V~~a~pk~~ 271 (872)
++|||+|||.++|+++|+++|++||.|.++.+ .+.+|||||+|.+.++|++|++.|+|. .+.|++|+|+|+.|+..
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~-~~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~ 78 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQV-LLKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKL 78 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCE-EEETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEE-ecccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCc
Confidence 46999999999999999999999999877643 357899999999999999999999996 59999999999988654
No 81
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.1e-14 Score=130.61 Aligned_cols=82 Identities=22% Similarity=0.342 Sum_probs=72.0
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEE-------------eCCCcccEEEEEeCCHHHHHHHHHHhcCcc
Q 002874 189 YGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLY-------------TACKHRGFVMISYYDIRAARTAMRALQNKP 255 (872)
Q Consensus 189 ~~e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~-------------~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~ 255 (872)
..+...++|||+|||.++|+++|+++|++||.|..+. .+++++|||||+|.+.++|.+|++.|+|..
T Consensus 3 ~~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~ 82 (101)
T d2cpea1 3 DEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKD 82 (101)
T ss_dssp CCCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCE
T ss_pred CCCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCE
Confidence 3456679999999999999999999999999985432 135778999999999999999999999999
Q ss_pred cccceeeeeecCCCC
Q 002874 256 LRRRKLDIHFSIPKD 270 (872)
Q Consensus 256 l~gr~L~V~~a~pk~ 270 (872)
|.|++|+|+++.++.
T Consensus 83 ~~gr~i~V~~a~~~~ 97 (101)
T d2cpea1 83 FQGSKLKVSLARKKP 97 (101)
T ss_dssp ETTEECEEECSSCCC
T ss_pred ECCEEEEEEEcCCCC
Confidence 999999999997654
No 82
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=4.7e-15 Score=134.12 Aligned_cols=79 Identities=23% Similarity=0.392 Sum_probs=72.3
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
..++|||+|||.++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|||..|.|++|+|+++.
T Consensus 7 ~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~ 86 (104)
T d1p1ta_ 7 SLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAA 86 (104)
T ss_dssp HHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETT
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 4568999999999999999999999999999875 35568999999999999999999999999999999999998
Q ss_pred CCcc
Q 002874 353 PGGA 356 (872)
Q Consensus 353 p~~~ 356 (872)
++..
T Consensus 87 ~~~~ 90 (104)
T d1p1ta_ 87 SEKN 90 (104)
T ss_dssp CTTH
T ss_pred CCCC
Confidence 7653
No 83
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=4.2e-15 Score=130.67 Aligned_cols=78 Identities=21% Similarity=0.351 Sum_probs=72.3
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCccc
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGGAR 357 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~~r 357 (872)
..++|||+|||+++|+++|+++|++||.|.+|++...+++||||+|.+.++|++|+. ++..|+|++|+|++++++...
T Consensus 4 ~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~~ 81 (88)
T d1wf0a_ 4 GSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHNS 81 (88)
T ss_dssp CCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCCC
Confidence 357899999999999999999999999999999988889999999999999999986 889999999999999887543
No 84
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.5e-14 Score=124.52 Aligned_cols=75 Identities=20% Similarity=0.353 Sum_probs=69.4
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCC
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 269 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk 269 (872)
+..++|||+||+ +|+++|+++|++||+|.+|++ .+.+|||||+|.+.++|.+|++.|+|..+.|++|+|.|+.++
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~-~~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~ 77 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSM-DPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQ 77 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEE-ETTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSS
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhccCccceeee-ccCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCC
Confidence 567899999996 999999999999999999976 467899999999999999999999999999999999999754
No 85
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.51 E-value=9e-15 Score=128.08 Aligned_cols=76 Identities=22% Similarity=0.391 Sum_probs=71.1
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCc
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGG 355 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~ 355 (872)
.++|||+|||.++++++|+++|++||.|.+|++. +.++||||+|.+.++|++|++.|||..|+|++|+|+||.++.
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~-~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-KDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEE-TTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeeee-cccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 4579999999999999999999999999999885 457999999999999999999999999999999999998764
No 86
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=9e-15 Score=132.53 Aligned_cols=79 Identities=15% Similarity=0.312 Sum_probs=71.8
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
..++|||+|||+++++++|+++|++||.|..+.+ ++.++|||||+|.+.++|++|++ ++|..|+|++|.|.++.
T Consensus 19 ~~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~ 97 (103)
T d1x4ba1 19 QFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAV 97 (103)
T ss_dssp HHTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCS
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECc
Confidence 3478999999999999999999999999999976 34678999999999999999996 89999999999999999
Q ss_pred CCccc
Q 002874 353 PGGAR 357 (872)
Q Consensus 353 p~~~r 357 (872)
++..+
T Consensus 98 ~ke~~ 102 (103)
T d1x4ba1 98 AREES 102 (103)
T ss_dssp SCCCC
T ss_pred ccCCC
Confidence 87653
No 87
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=7e-15 Score=127.45 Aligned_cols=75 Identities=20% Similarity=0.475 Sum_probs=67.7
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEEE-E-----eCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCCC
Q 002874 197 LFVRNINSNVEDLELRSLFEQYGDIRTL-Y-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 270 (872)
Q Consensus 197 LfV~NLP~~vteeeLr~lFs~fG~I~~v-~-----~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk~ 270 (872)
|||+|||+++|+++|+++|++||.|..+ + .+++++|||||+|.+.++|++|++.|+|..+.|++|+|+|+.+++
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999998653 2 246789999999999999999999999999999999999998764
Q ss_pred C
Q 002874 271 N 271 (872)
Q Consensus 271 ~ 271 (872)
.
T Consensus 81 ~ 81 (83)
T d1x5ta1 81 S 81 (83)
T ss_dssp C
T ss_pred c
Confidence 3
No 88
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=2.4e-14 Score=126.50 Aligned_cols=77 Identities=21% Similarity=0.402 Sum_probs=69.6
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
...+|||+|||+++|+++|+++|++||.|.+|++ ++.++|||||+|.+.++|++||+. +..|+|+.|.|+++.
T Consensus 7 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a~ 84 (90)
T d2cqga1 7 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLPN 84 (90)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECCC
T ss_pred CCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeCC
Confidence 4578999999999999999999999999999975 467799999999999999999984 558999999999998
Q ss_pred CCcc
Q 002874 353 PGGA 356 (872)
Q Consensus 353 p~~~ 356 (872)
++..
T Consensus 85 ~k~~ 88 (90)
T d2cqga1 85 SKQS 88 (90)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 8754
No 89
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=8.5e-15 Score=131.32 Aligned_cols=81 Identities=25% Similarity=0.336 Sum_probs=71.5
Q ss_pred ccccceeeeccCCccchhhHhhhhcccCCeEEE--------Ee-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCC
Q 002874 277 VNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEI--------RE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDING 343 (872)
Q Consensus 277 ~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~v--------ri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~G 343 (872)
....+|||+|||..+|+++|+++|+.||.|..+ .+ +++++|||||+|.+.++|.+|++.|||..|+|
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 85 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQG 85 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECC
Confidence 456799999999999999999999999988643 21 35668999999999999999999999999999
Q ss_pred cEEEEEecCCCccc
Q 002874 344 KRIKLEPSRPGGAR 357 (872)
Q Consensus 344 r~L~V~~s~p~~~r 357 (872)
++|+|++++++..+
T Consensus 86 r~i~V~~a~~~~p~ 99 (101)
T d2cpea1 86 SKLKVSLARKKPPM 99 (101)
T ss_dssp EECEEECSSCCCCS
T ss_pred EEEEEEEcCCCCCC
Confidence 99999999986543
No 90
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=2.2e-14 Score=128.69 Aligned_cols=77 Identities=25% Similarity=0.490 Sum_probs=69.6
Q ss_pred CCCCcEEEEcCCC-CCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCC
Q 002874 191 EHPSRTLFVRNIN-SNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 269 (872)
Q Consensus 191 e~~srtLfV~NLP-~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk 269 (872)
....++|||+||| ..+++++|+++|++||+|.+|++ ++|||||+|.+.++|++|++.|+|+.|.|++|+|+|+.++
T Consensus 12 ~~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i---~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~ 88 (98)
T d1wf2a_ 12 RSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV---HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEP 88 (98)
T ss_dssp SSCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE---ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSC
T ss_pred CCCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE---eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 3445789999997 57889999999999999999986 6899999999999999999999999999999999999754
Q ss_pred C
Q 002874 270 D 270 (872)
Q Consensus 270 ~ 270 (872)
.
T Consensus 89 ~ 89 (98)
T d1wf2a_ 89 K 89 (98)
T ss_dssp C
T ss_pred C
Confidence 3
No 91
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=6.6e-15 Score=132.40 Aligned_cols=80 Identities=23% Similarity=0.402 Sum_probs=73.1
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEE-----eCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~-----~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
.++++|||+|||.++++++|+++|++||.|..+. ..++++|||||+|.+.++|++|++.|+|..|.|++|.|.|+
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 4689999999999999999999999999876654 35789999999999999999999999999999999999999
Q ss_pred CCCCC
Q 002874 267 IPKDN 271 (872)
Q Consensus 267 ~pk~~ 271 (872)
.+++.
T Consensus 96 k~k~~ 100 (102)
T d2cpxa1 96 KNKKQ 100 (102)
T ss_dssp CCCSC
T ss_pred CCccc
Confidence 87654
No 92
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=2.7e-14 Score=127.11 Aligned_cols=79 Identities=22% Similarity=0.408 Sum_probs=71.0
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhC------CceeCCcEE
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALN------RSDINGKRI 346 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~Ln------G~~l~Gr~L 346 (872)
..++|||+|||+++|+++|+++|++||.|.++++ .+.++|||||+|.+.++|.+|++.|| |..|.|++|
T Consensus 7 ~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l 86 (98)
T d1x4ha1 7 EGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQL 86 (98)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEE
T ss_pred CCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEE
Confidence 3578999999999999999999999999999875 34578999999999999999999987 678999999
Q ss_pred EEEecCCCcc
Q 002874 347 KLEPSRPGGA 356 (872)
Q Consensus 347 ~V~~s~p~~~ 356 (872)
+|+++.++.+
T Consensus 87 ~v~~a~~k~~ 96 (98)
T d1x4ha1 87 KVDLAVTRDE 96 (98)
T ss_dssp EEECCCCCCC
T ss_pred EEEECCCCCc
Confidence 9999988654
No 93
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.1e-14 Score=125.38 Aligned_cols=75 Identities=21% Similarity=0.424 Sum_probs=69.2
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCc
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGG 355 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~ 355 (872)
..++|||+|++ +|+++|+++|++||.|.+|++. +.++||||+|.+.++|.+|++.|||..|+|++|+|+|++++.
T Consensus 4 ~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~-~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~P 78 (79)
T d2bz2a1 4 KGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMD-PPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQP 78 (79)
T ss_dssp CCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEE-TTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSSC
T ss_pred CCCEEEEECCC--CCHHHHHHHHhccCccceeeec-cCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCCC
Confidence 35789999986 8999999999999999999885 567999999999999999999999999999999999998763
No 94
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.50 E-value=1.4e-14 Score=126.76 Aligned_cols=76 Identities=18% Similarity=0.378 Sum_probs=67.4
Q ss_pred CCcEEEEcCCCCCCC-HHHHHHHhhccCCeEEEEe------CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeee
Q 002874 193 PSRTLFVRNINSNVE-DLELRSLFEQYGDIRTLYT------ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 265 (872)
Q Consensus 193 ~srtLfV~NLP~~vt-eeeLr~lFs~fG~I~~v~~------~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~ 265 (872)
..++|||+|||++++ +++|+++|++||+|.+|++ .++++|||||+|.+.++|++|++ |++..+.|++|.|++
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 468999999999976 5679999999999999973 35678999999999999999996 999999999999999
Q ss_pred cCCC
Q 002874 266 SIPK 269 (872)
Q Consensus 266 a~pk 269 (872)
+.++
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9764
No 95
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=2.6e-14 Score=125.65 Aligned_cols=76 Identities=14% Similarity=0.305 Sum_probs=67.3
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCCC
Q 002874 193 PSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 270 (872)
Q Consensus 193 ~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk~ 270 (872)
.+++|||+|||++++++||+++|++||. ..+. ..+.+|||||+|.+.++|++|++.|++..|.|++|.|+|+..+.
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G~-~~~~-~~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYDL-KYCY-VDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDA 79 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSCC-CCEE-EEGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcCc-eeee-eeccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 4689999999999999999999999992 2232 25789999999999999999999999999999999999996543
No 96
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=3e-14 Score=124.13 Aligned_cols=74 Identities=24% Similarity=0.439 Sum_probs=68.2
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecC
Q 002874 193 PSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 267 (872)
Q Consensus 193 ~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~ 267 (872)
..++|||+|||+++++++|+++|++||+|..+.+ +++++|||||+|.+.++|++|++ +++..|.|+.|.|+.|.
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 4589999999999999999999999999999873 47789999999999999999997 79999999999998874
No 97
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=3.6e-14 Score=126.40 Aligned_cols=81 Identities=22% Similarity=0.334 Sum_probs=70.8
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCC-eEEEEe------CCCcccEEEEEeCCHHHHHHHHHHhcCc--ccccceeeee
Q 002874 194 SRTLFVRNINSNVEDLELRSLFEQYGD-IRTLYT------ACKHRGFVMISYYDIRAARTAMRALQNK--PLRRRKLDIH 264 (872)
Q Consensus 194 srtLfV~NLP~~vteeeLr~lFs~fG~-I~~v~~------~~~srG~AFVeF~~~e~A~~Ai~~Lng~--~l~gr~L~V~ 264 (872)
+++|||+|||.++++++|+++|++||+ |..+++ .++++|||||+|.+.++|.+|++.|++. .+.|++|.|.
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 368999999999999999999999996 888874 3568899999999999999999999654 5579999999
Q ss_pred ecCCCCCCCC
Q 002874 265 FSIPKDNPSE 274 (872)
Q Consensus 265 ~a~pk~~~~~ 274 (872)
|+.|+..+..
T Consensus 81 ~A~p~~~~~~ 90 (96)
T d2disa1 81 WAEPEIDVDE 90 (96)
T ss_dssp ESCSSCSTTT
T ss_pred EcCCCCCCCh
Confidence 9998776643
No 98
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.4e-14 Score=127.32 Aligned_cols=75 Identities=13% Similarity=0.293 Sum_probs=66.4
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCc
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGG 355 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~ 355 (872)
.++|||+|||++++++||+++|++|| ++.+.+ ...++||||+|.+.++|++|++.|||..|+|++|+|++++++.
T Consensus 5 s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~-~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 5 SSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV-DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDA 79 (88)
T ss_dssp CCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE-EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred CCEEEEeCCCCccChHHHHHHHHhcC-ceeeee-eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 46899999999999999999999999 333333 3568999999999999999999999999999999999997653
No 99
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.48 E-value=5.6e-14 Score=125.53 Aligned_cols=77 Identities=29% Similarity=0.507 Sum_probs=70.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCccccc--ceeeeeecCCC
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRR--RKLDIHFSIPK 269 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~g--r~L~V~~a~pk 269 (872)
.|+++|||+|||+++++++|+++|++||+|..|++. +.++||||+|.+.++|++|++.|++..|.| ++|+|+|+.+.
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~-~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~ 93 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHV-KGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSG 93 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEEC-SSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeee-ccccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCC
Confidence 568999999999999999999999999999999864 578999999999999999999999999976 58999998754
No 100
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=3.9e-14 Score=128.98 Aligned_cols=80 Identities=21% Similarity=0.285 Sum_probs=71.6
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-CCCcccEEEEEeCCHHHHHHHHHHhcCccc--ccceeeeeecC
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-ACKHRGFVMISYYDIRAARTAMRALQNKPL--RRRKLDIHFSI 267 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l--~gr~L~V~~a~ 267 (872)
..+..+|||+|||+++|+++|+++|++||.|.+|.+ ..+++|||||+|.+.++|++|+..|+|..| .+++|+|.|+.
T Consensus 4 ~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~ 83 (108)
T d2adba1 4 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSK 83 (108)
T ss_dssp CCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECS
T ss_pred CCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecC
Confidence 456789999999999999999999999999999874 345789999999999999999999999998 57899999987
Q ss_pred CCC
Q 002874 268 PKD 270 (872)
Q Consensus 268 pk~ 270 (872)
++.
T Consensus 84 ~~~ 86 (108)
T d2adba1 84 LTS 86 (108)
T ss_dssp SCS
T ss_pred Ccc
Confidence 654
No 101
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=1.9e-14 Score=129.67 Aligned_cols=77 Identities=21% Similarity=0.283 Sum_probs=70.1
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRP 353 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p 353 (872)
..++|||+|||+++++++|+++|++||.|..+++ .+.++|||||+|.+.++|++|++.|||..|.|+++.|.+++|
T Consensus 17 ~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~P 96 (101)
T d1x5oa1 17 DPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 96 (101)
T ss_dssp CTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCCC
Confidence 3568999999999999999999999999998864 345689999999999999999999999999999999988877
Q ss_pred C
Q 002874 354 G 354 (872)
Q Consensus 354 ~ 354 (872)
-
T Consensus 97 l 97 (101)
T d1x5oa1 97 L 97 (101)
T ss_dssp B
T ss_pred c
Confidence 4
No 102
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=2.4e-14 Score=129.64 Aligned_cols=78 Identities=18% Similarity=0.422 Sum_probs=71.2
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecC
Q 002874 193 PSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 267 (872)
Q Consensus 193 ~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~ 267 (872)
..++|||+|||+++++++|+++|++||.|..+.+ ++.++|||||+|.+.++|++|++ +++..|.|++|.|.++.
T Consensus 19 ~~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~ 97 (103)
T d1x4ba1 19 QFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAV 97 (103)
T ss_dssp HHTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCS
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECc
Confidence 3489999999999999999999999999999884 45789999999999999999996 89999999999999998
Q ss_pred CCCC
Q 002874 268 PKDN 271 (872)
Q Consensus 268 pk~~ 271 (872)
+++.
T Consensus 98 ~ke~ 101 (103)
T d1x4ba1 98 AREE 101 (103)
T ss_dssp SCCC
T ss_pred ccCC
Confidence 7654
No 103
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=6.1e-14 Score=137.94 Aligned_cols=154 Identities=19% Similarity=0.296 Sum_probs=109.4
Q ss_pred ccCCCCcchhHHHhhcccccccccCCCccccccc-ccc------CCCCcEEEEecChhhHHHhhhhhhcccCCcCCCccc
Q 002874 101 IGSLLPDDENDLLAGLVDDFDLRGLPSQLEDLED-DLF------DSGGGMELEFEPHESLSIGVSKLNISDGIAGTGIAH 173 (872)
Q Consensus 101 iwNlLp~~~dav~s~vadel~l~klfsd~~diee-dlf------ss~Ggv~V~~d~~esa~~a~~k~~~~~~~~~ngv~~ 173 (872)
++||.+..+++-+.. +|+.+++|.+ ++. ...|.++|+|...+.+..++......- ....+..
T Consensus 11 V~nLp~~~te~~L~~---------~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~--~~~~~~~ 79 (183)
T d1u1qa_ 11 IGGLSFETTDESLRS---------HFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKV--DGRVVEP 79 (183)
T ss_dssp EESCCTTCCHHHHHH---------HHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEE--TTEECEE
T ss_pred EECCCCCCCHHHHHH---------HHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcCCcc--cccchhh
Confidence 899999866655555 4445555555 332 223458999999998888766433110 0111111
Q ss_pred cccCCCCCcccCCCCCCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHH
Q 002874 174 YPISNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAM 248 (872)
Q Consensus 174 ~~l~n~~~~~~g~~~~~e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai 248 (872)
.... ..............++|||+|||..+|+++|+++|+.||.|..+.+ ++.++|||||+|.+.++|++|+
T Consensus 80 ~~~~---~~~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al 156 (183)
T d1u1qa_ 80 KRAV---SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 156 (183)
T ss_dssp EECC---CTTGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHH
T ss_pred hhhh---hcccccccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHH
Confidence 0111 0111122334567789999999999999999999999999999873 3678899999999999999999
Q ss_pred HHhcCcccccceeeeeecCCC
Q 002874 249 RALQNKPLRRRKLDIHFSIPK 269 (872)
Q Consensus 249 ~~Lng~~l~gr~L~V~~a~pk 269 (872)
+ +++..+.|++|.|.++.++
T Consensus 157 ~-~~~~~~~G~~i~V~~A~~k 176 (183)
T d1u1qa_ 157 I-QKYHTVNGHNCEVRKALSK 176 (183)
T ss_dssp T-SSCEEETTEEEEEEECCCH
T ss_pred H-hCCCeECCEEEEEEecCCc
Confidence 7 7889999999999998765
No 104
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=7.6e-14 Score=122.31 Aligned_cols=80 Identities=23% Similarity=0.326 Sum_probs=71.6
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHh--cCcccccceeeeeecC
Q 002874 190 GEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRAL--QNKPLRRRKLDIHFSI 267 (872)
Q Consensus 190 ~e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~L--ng~~l~gr~L~V~~a~ 267 (872)
...|+++|||+|||.++++++|+++|++||.|..+++. +.++||||+|.+.++|++|++.+ ++..+.|++|+|.|+.
T Consensus 4 ~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~-~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk 82 (88)
T d2cq1a1 4 DGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILML-KGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSN 82 (88)
T ss_dssp CSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEE-TTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECS
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccc-ccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECC
Confidence 35689999999999999999999999999999999754 67899999999999999999876 4678999999999997
Q ss_pred CCC
Q 002874 268 PKD 270 (872)
Q Consensus 268 pk~ 270 (872)
.+.
T Consensus 83 ~~~ 85 (88)
T d2cq1a1 83 HKE 85 (88)
T ss_dssp CSS
T ss_pred CCC
Confidence 543
No 105
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=9.4e-15 Score=131.93 Aligned_cols=77 Identities=18% Similarity=0.388 Sum_probs=70.4
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeee
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 265 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~ 265 (872)
++..++|||+|||+++++++|+++|+.||+|.+|++ +++++|||||+|.+.++|++|++ |+|..|.|++|.|++
T Consensus 15 ~~~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~ 93 (101)
T d2cq4a1 15 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQA 93 (101)
T ss_dssp HHHHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEE
Confidence 345689999999999999999999999999999984 46799999999999999999995 999999999999998
Q ss_pred cCC
Q 002874 266 SIP 268 (872)
Q Consensus 266 a~p 268 (872)
+.+
T Consensus 94 a~~ 96 (101)
T d2cq4a1 94 SQA 96 (101)
T ss_dssp HHH
T ss_pred CCC
Confidence 754
No 106
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=4.6e-14 Score=122.91 Aligned_cols=74 Identities=18% Similarity=0.350 Sum_probs=67.9
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
..++|||+|||+++++++|+++|++||.|..+++ ++.++|||||+|.+.++|++|++ +++..|.|++|+|+.|.
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 3468999999999999999999999999999975 46779999999999999999997 69999999999998875
No 107
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=1.2e-14 Score=127.39 Aligned_cols=73 Identities=21% Similarity=0.161 Sum_probs=67.8
Q ss_pred ceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCc
Q 002874 281 TLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGG 355 (872)
Q Consensus 281 tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~ 355 (872)
+|||+|||+++++++|+++|++||.|.++++. ++|||||+|.+.++|++||+.|||..|.|+.|+|.+++++.
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~ 74 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVY--RDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKV 74 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEEC--TTSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccc--ccceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCc
Confidence 69999999999999999999999999999985 45899999999999999999999999999999998876543
No 108
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=5.7e-14 Score=125.98 Aligned_cols=81 Identities=15% Similarity=0.218 Sum_probs=73.2
Q ss_pred CCCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecC
Q 002874 188 PYGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 267 (872)
Q Consensus 188 ~~~e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~ 267 (872)
|...+..++|||+|||+++++++|+++|++||+|..|.+. .+|||||+|.+.++|++||+.|++..|.|+.|+|.+..
T Consensus 9 p~~~~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~--~~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~ 86 (98)
T d1wg4a_ 9 PPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ--KDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIR 86 (98)
T ss_dssp CCCCSCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEE--TTTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEE
T ss_pred CCCCCCCCEEEEECCCCCCCHHHHHHHHHhhccccccccc--ccceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEe
Confidence 3445667899999999999999999999999999999863 57999999999999999999999999999999999986
Q ss_pred CCC
Q 002874 268 PKD 270 (872)
Q Consensus 268 pk~ 270 (872)
++.
T Consensus 87 ~~~ 89 (98)
T d1wg4a_ 87 VYP 89 (98)
T ss_dssp EEC
T ss_pred cCC
Confidence 544
No 109
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=5.3e-14 Score=119.97 Aligned_cols=71 Identities=15% Similarity=0.341 Sum_probs=65.5
Q ss_pred eeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCC
Q 002874 282 LVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPG 354 (872)
Q Consensus 282 LfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~ 354 (872)
|||+|||+++++++|+++|++|| ++.+++ .+.+|||||+|.+.++|++|++.|||..+.|++|+|++++..
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~-~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV-DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE-ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee-cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999999 666655 467899999999999999999999999999999999999765
No 110
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=4.8e-14 Score=120.86 Aligned_cols=72 Identities=24% Similarity=0.480 Sum_probs=66.6
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 194 srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
.++|||+|||+++|+++|+++|++||.|..+.+ ++.++|||||+|.+.++|++|++ ++|..|.|++|.|+.|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 489999999999999999999999999998873 56689999999999999999996 8999999999999876
No 111
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=2.8e-14 Score=121.61 Aligned_cols=70 Identities=21% Similarity=0.390 Sum_probs=64.5
Q ss_pred ceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 281 TLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 281 tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
+|||+|||+++++++|+++|++||.|..+++ +++++|||||+|.+.++|++|++ +++..|+|++|+|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 4899999999999999999999999999976 35678999999999999999997 8999999999999754
No 112
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=1.4e-14 Score=130.24 Aligned_cols=80 Identities=28% Similarity=0.320 Sum_probs=72.8
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEE-----eCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIR-----ETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vr-----i~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
..++|||+|||.++++++|+++|++||.|..+. .+++++|||||+|.+.++|.+|++.|||..|.|++|+|+|++
T Consensus 17 ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak 96 (102)
T d2cpxa1 17 PNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 96 (102)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCC
Confidence 467899999999999999999999999887663 357789999999999999999999999999999999999999
Q ss_pred CCccc
Q 002874 353 PGGAR 357 (872)
Q Consensus 353 p~~~r 357 (872)
++..|
T Consensus 97 ~k~~r 101 (102)
T d2cpxa1 97 NKKQR 101 (102)
T ss_dssp CCSCC
T ss_pred CcccC
Confidence 87654
No 113
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=4.9e-14 Score=125.91 Aligned_cols=77 Identities=21% Similarity=0.373 Sum_probs=70.9
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCC--cEEEEEecCCCc
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDING--KRIKLEPSRPGG 355 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~G--r~L~V~~s~p~~ 355 (872)
..++|||+|||+++++++|+++|++||.|..+++. +.++||||+|.+.++|++|++.|||..|.| ++|+|+|++++.
T Consensus 16 Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~-~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~~ 94 (97)
T d1whya_ 16 PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHV-KGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSGP 94 (97)
T ss_dssp CCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEEC-SSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeee-ccccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCCC
Confidence 46799999999999999999999999999999986 457899999999999999999999999987 589999998754
No 114
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=6.2e-14 Score=119.57 Aligned_cols=71 Identities=18% Similarity=0.445 Sum_probs=65.0
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCC
Q 002874 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 269 (872)
Q Consensus 197 LfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk 269 (872)
|||+|||+++++++|+++|++|| +..+++ .+++|||||+|.+.++|++|+..|+|..+.|++|.|+|+..+
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~-~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV-DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE-ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee-cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999999 555543 578999999999999999999999999999999999999543
No 115
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=2.4e-14 Score=126.43 Aligned_cols=78 Identities=23% Similarity=0.465 Sum_probs=70.4
Q ss_pred ccceeeeccCCccchhhHhh----hhcccCCeEEEEeC--CCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 279 QGTLVVFNLDASVSNDDLRQ----IFGAYGEVKEIRET--PHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre----~Fs~fG~V~~vri~--~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
.+||||+|||+.+++++|++ +|++||+|.+|++. ++.+|||||+|.+.++|.+|++.|||..++|++|+|.||+
T Consensus 3 ~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ak 82 (91)
T d1nu4a_ 3 NHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAK 82 (91)
T ss_dssp CSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEECS
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 57899999999999999864 68999999999874 3468999999999999999999999999999999999998
Q ss_pred CCcc
Q 002874 353 PGGA 356 (872)
Q Consensus 353 p~~~ 356 (872)
++..
T Consensus 83 ~~~~ 86 (91)
T d1nu4a_ 83 TDSD 86 (91)
T ss_dssp SCCT
T ss_pred CCch
Confidence 8654
No 116
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=4.7e-14 Score=120.17 Aligned_cols=70 Identities=14% Similarity=0.379 Sum_probs=64.6
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 196 tLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
+|||+|||+++++++|+++|++||+|..|.+ +++++|||||+|.+.++|++|++ +++..|.|++|.|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 4899999999999999999999999999983 46789999999999999999997 7999999999998754
No 117
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=5.3e-14 Score=120.56 Aligned_cols=71 Identities=20% Similarity=0.379 Sum_probs=65.4
Q ss_pred cceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 280 GTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 280 ~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
++|||+|||+++|+++|+++|++||.|..+.+ ++.++|||||+|.+.++|.+|++ ++|..|+|++|+|+.|
T Consensus 3 r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 3 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp SEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 58999999999999999999999999999865 45578999999999999999996 8999999999999876
No 118
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.46 E-value=1.6e-14 Score=124.02 Aligned_cols=71 Identities=27% Similarity=0.456 Sum_probs=65.7
Q ss_pred cceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 280 GTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 280 ~tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
++|||+|||+++|+++|+++|++||.|.++++ +++++|||||+|.+.++|++|++ +++..|+|++|+|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 47999999999999999999999999998865 46689999999999999999997 7999999999999876
No 119
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.46 E-value=1.4e-14 Score=128.23 Aligned_cols=78 Identities=15% Similarity=0.199 Sum_probs=69.9
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEE----eCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLY----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~----~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
....++|||+|||+++++++|+++|++||.|..++ .+++++|||||+|.+.++|++|++ |++..+.|++|.|.++
T Consensus 10 ~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~a 88 (91)
T d1fjeb1 10 STTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKP 88 (91)
T ss_dssp CSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECC
T ss_pred CCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEec
Confidence 34567999999999999999999999999876654 357899999999999999999996 9999999999999998
Q ss_pred CCC
Q 002874 267 IPK 269 (872)
Q Consensus 267 ~pk 269 (872)
..+
T Consensus 89 k~k 91 (91)
T d1fjeb1 89 KGR 91 (91)
T ss_dssp CCS
T ss_pred CCC
Confidence 653
No 120
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.45 E-value=9.1e-15 Score=129.45 Aligned_cols=76 Identities=22% Similarity=0.295 Sum_probs=69.0
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRP 353 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p 353 (872)
...+|||+|||+++++++|+++|++||.|..+++ +++++|||||+|.+.++|++||+ |||..|+|++|+|++++.
T Consensus 12 ~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak~ 90 (91)
T d1fjeb1 12 TPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPKG 90 (91)
T ss_dssp SSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCCC
T ss_pred CCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecCC
Confidence 4568999999999999999999999998877643 56789999999999999999996 999999999999999986
Q ss_pred C
Q 002874 354 G 354 (872)
Q Consensus 354 ~ 354 (872)
+
T Consensus 91 k 91 (91)
T d1fjeb1 91 R 91 (91)
T ss_dssp S
T ss_pred C
Confidence 4
No 121
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=1.5e-13 Score=123.97 Aligned_cols=79 Identities=16% Similarity=0.370 Sum_probs=68.6
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe------CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeee
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT------ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 265 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~------~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~ 265 (872)
.+.++|||+|||+++|+++|+++|++|| |..+++ .++++|||||+|.+.++|++|++ |++..|.|++|+|.+
T Consensus 13 ~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~~-~~~~~~~gr~l~V~~ 90 (104)
T d1wi8a_ 13 SPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS-LNEESLGNKRIRVDV 90 (104)
T ss_dssp SSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHG-GGTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 4679999999999999999999999999 556552 35678999999999999987775 999999999999999
Q ss_pred cCCCCCC
Q 002874 266 SIPKDNP 272 (872)
Q Consensus 266 a~pk~~~ 272 (872)
+.++...
T Consensus 91 a~~~~~~ 97 (104)
T d1wi8a_ 91 ADQAQDK 97 (104)
T ss_dssp CCCCCCC
T ss_pred CCCCCCC
Confidence 9876543
No 122
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=3.2e-14 Score=124.62 Aligned_cols=73 Identities=15% Similarity=0.192 Sum_probs=67.3
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeecCCC
Q 002874 195 RTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 269 (872)
Q Consensus 195 rtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~pk 269 (872)
++|||+|||+++++++|+++|++||+|..+++. .+|||||+|.+.++|++|++.|+|..|.|+.|.|.++.++
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY--RDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 73 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEEC--TTSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhccccccccc--ccceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecC
Confidence 369999999999999999999999999999864 4699999999999999999999999999999999887544
No 123
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=3.5e-14 Score=127.40 Aligned_cols=77 Identities=21% Similarity=0.159 Sum_probs=71.0
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCCCcc
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRPGGA 356 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~~ 356 (872)
...+|||+|||+++++++|+++|++||+|+.+++. ++|||||+|.+.++|++||+.|||..|.|+.|+|.+.+++..
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~--~~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~~~ 90 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ--KDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYPE 90 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEE--TTTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhccccccccc--ccceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecCCC
Confidence 35689999999999999999999999999999885 569999999999999999999999999999999999876543
No 124
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=3.1e-13 Score=122.19 Aligned_cols=80 Identities=15% Similarity=0.236 Sum_probs=71.5
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhc--CcccccceeeeeecC
Q 002874 190 GEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ--NKPLRRRKLDIHFSI 267 (872)
Q Consensus 190 ~e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Ln--g~~l~gr~L~V~~a~ 267 (872)
...++++|||+|||.++++++|+++|++||.|..|++ .+.+++|||+|.+.++|++|++.++ +..+.|++|+|.|+.
T Consensus 11 ~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~-~~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~ 89 (104)
T d1wexa_ 11 KVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMM-MPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYST 89 (104)
T ss_dssp CCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEE-ETTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECS
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEE-EecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcC
Confidence 3467999999999999999999999999999999976 4679999999999999999999885 456789999999997
Q ss_pred CCC
Q 002874 268 PKD 270 (872)
Q Consensus 268 pk~ 270 (872)
.+.
T Consensus 90 ~~~ 92 (104)
T d1wexa_ 90 SKR 92 (104)
T ss_dssp SSS
T ss_pred CCc
Confidence 654
No 125
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=2.4e-14 Score=122.86 Aligned_cols=71 Identities=17% Similarity=0.415 Sum_probs=65.9
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 195 RTLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 195 rtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
++|||+|||+++|+++|+++|++||+|.++++ +++++|||||+|.+.++|++|++ +++..+.|++|.|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 57999999999999999999999999988873 47799999999999999999997 7999999999999876
No 126
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=3.5e-14 Score=120.29 Aligned_cols=70 Identities=20% Similarity=0.361 Sum_probs=64.7
Q ss_pred ceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 281 TLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 281 tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
+|||+|||+++|+++|+++|++||.|..+.+ ++..++||||+|.+.++|++|++ |||+.|+|++|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 4899999999999999999999999999864 35678999999999999999996 9999999999999875
No 127
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44 E-value=5.6e-14 Score=119.02 Aligned_cols=70 Identities=16% Similarity=0.389 Sum_probs=64.9
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 196 tLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
+|||+|||+++|+++|+++|++||.|..+.+ ++.++|||||+|.+.++|++|++ +++..|.|++|.|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 4899999999999999999999999998872 46788999999999999999997 9999999999999875
No 128
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44 E-value=1.2e-13 Score=121.56 Aligned_cols=72 Identities=14% Similarity=0.392 Sum_probs=64.4
Q ss_pred cccceeeeccCCccchhhH---hhhhcccCCeEEEEeCC--------CCccEEEEEECCHHHHHHHHHHhCCceeCCcEE
Q 002874 278 NQGTLVVFNLDASVSNDDL---RQIFGAYGEVKEIRETP--------HKRHHKFIEFYDVRAAEAALRALNRSDINGKRI 346 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedL---re~Fs~fG~V~~vri~~--------~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L 346 (872)
..++|||+|||+++++++| +++|++||.|..|.+.. ..+|||||+|.+.++|.+|++.|||..|+|+.|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 3567999999999999999 78999999999997631 234899999999999999999999999999999
Q ss_pred EEE
Q 002874 347 KLE 349 (872)
Q Consensus 347 ~V~ 349 (872)
+|+
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 985
No 129
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=3.6e-14 Score=129.21 Aligned_cols=78 Identities=23% Similarity=0.292 Sum_probs=69.9
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEEEEeC-CCCccEEEEEECCHHHHHHHHHHhCCcee--CCcEEEEEecCCCc
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRET-PHKRHHKFIEFYDVRAAEAALRALNRSDI--NGKRIKLEPSRPGG 355 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~-~~skG~gFVeF~~~e~A~kAl~~LnG~~l--~Gr~L~V~~s~p~~ 355 (872)
..+|||+||++.+|+++|+++|++||.|..|.+. .+++|||||+|.+.++|++|++.|||..| .|++|+|.+++++.
T Consensus 7 ~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~~~ 86 (108)
T d2adba1 7 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTS 86 (108)
T ss_dssp EEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSSCS
T ss_pred eEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCCcc
Confidence 4579999999999999999999999999998763 34689999999999999999999999988 57899999998764
Q ss_pred c
Q 002874 356 A 356 (872)
Q Consensus 356 ~ 356 (872)
.
T Consensus 87 ~ 87 (108)
T d2adba1 87 L 87 (108)
T ss_dssp C
T ss_pred c
Confidence 3
No 130
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.6e-13 Score=123.77 Aligned_cols=78 Identities=21% Similarity=0.360 Sum_probs=67.7
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe------CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE------TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri------~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
...+|||+|||+++++++|+++|++|| |.++++ +++.+|||||+|.+.++|++|++ ||+..|+|++|+|.++
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~~-~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS-LNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHG-GGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHHH-cCCCEECCEEEEEEEC
Confidence 357999999999999999999999999 666654 34568999999999999987774 9999999999999999
Q ss_pred CCCccc
Q 002874 352 RPGGAR 357 (872)
Q Consensus 352 ~p~~~r 357 (872)
.++..+
T Consensus 92 ~~~~~~ 97 (104)
T d1wi8a_ 92 DQAQDK 97 (104)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 876543
No 131
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.1e-13 Score=120.64 Aligned_cols=73 Identities=12% Similarity=0.329 Sum_probs=67.6
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 193 PSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYT----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 193 ~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
..++|||+|||.++|+++|+++|++||+|..|++ +++++|||||+|.+.++|++|++ +++..+.|+.|.|+|.
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~ 81 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFK 81 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEc
Confidence 4689999999999999999999999999999974 45678999999999999999996 8999999999999985
No 132
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.43 E-value=1.1e-13 Score=117.87 Aligned_cols=71 Identities=20% Similarity=0.213 Sum_probs=64.5
Q ss_pred cceeeeccCCccchhhHhhhhcccCCeEEEEeC---CCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 280 GTLVVFNLDASVSNDDLRQIFGAYGEVKEIRET---PHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 280 ~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~---~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
+||||+|||+++++++|+++|+.||.|+.|++. ...++||||+|.+.++|++|+. +|++.|+|++|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 479999999999999999999999999999763 3456899999999999999995 8999999999999864
No 133
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=9.9e-14 Score=121.05 Aligned_cols=74 Identities=11% Similarity=0.179 Sum_probs=67.6
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEe----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
..++|||+|||.++|+++|+++|+.||.|..|++ ++.++|||||+|.+.++|++||+ ++|..+.|+.|+|.++.
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 4679999999999999999999999999999976 34568999999999999999996 79999999999999853
No 134
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=2.7e-13 Score=118.74 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=70.6
Q ss_pred ccccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHh--CCceeCCcEEEEEecCCC
Q 002874 277 VNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRAL--NRSDINGKRIKLEPSRPG 354 (872)
Q Consensus 277 ~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~L--nG~~l~Gr~L~V~~s~p~ 354 (872)
...++|||+|||.++++++|+++|++||.|.++++. +.+++|||+|.+.++|++|++.+ ++..+.|++|+|.|++.+
T Consensus 6 ~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~-~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~~ 84 (88)
T d2cq1a1 6 APSRVLHIRKLPGEVTETEVIALGLPFGKVTNILML-KGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHK 84 (88)
T ss_dssp SCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEE-TTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhccccccccccc-ccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCCC
Confidence 357899999999999999999999999999999875 45789999999999999999876 567999999999999865
Q ss_pred c
Q 002874 355 G 355 (872)
Q Consensus 355 ~ 355 (872)
.
T Consensus 85 ~ 85 (88)
T d2cq1a1 85 E 85 (88)
T ss_dssp S
T ss_pred C
Confidence 4
No 135
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=5.9e-14 Score=119.84 Aligned_cols=70 Identities=20% Similarity=0.410 Sum_probs=64.1
Q ss_pred ceeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 281 TLVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 281 tLfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
+|||+|||+++|+++|+++|++||.|.+|++ +++++|||||+|.+.++|++||+ +++..|+|+.|+|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 4899999999999999999999999999976 35679999999999999999997 5778999999999865
No 136
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.1e-13 Score=123.11 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=69.1
Q ss_pred cceeeeccCCccchhhHhhhhcccCC-eEEEEeC------CCCccEEEEEECCHHHHHHHHHHhCCc--eeCCcEEEEEe
Q 002874 280 GTLVVFNLDASVSNDDLRQIFGAYGE-VKEIRET------PHKRHHKFIEFYDVRAAEAALRALNRS--DINGKRIKLEP 350 (872)
Q Consensus 280 ~tLfV~NLp~~~teedLre~Fs~fG~-V~~vri~------~~skG~gFVeF~~~e~A~kAl~~LnG~--~l~Gr~L~V~~ 350 (872)
++|||+|||.++++++|+++|++||. |..+++. ++++|||||+|.+.++|.+|++.|++. .++|+.|+|+|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 57999999999999999999999996 8888762 457899999999999999999999654 66899999999
Q ss_pred cCCCccc
Q 002874 351 SRPGGAR 357 (872)
Q Consensus 351 s~p~~~r 357 (872)
|+|+...
T Consensus 82 A~p~~~~ 88 (96)
T d2disa1 82 AEPEIDV 88 (96)
T ss_dssp SCSSCST
T ss_pred cCCCCCC
Confidence 9987654
No 137
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1e-13 Score=118.31 Aligned_cols=70 Identities=19% Similarity=0.456 Sum_probs=64.0
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 196 TLFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 196 tLfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
+|||+|||+++|+++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++ .++..+.|+.|.|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 5999999999999999999999999999983 46789999999999999999997 5778899999998764
No 138
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=9.9e-14 Score=116.82 Aligned_cols=66 Identities=23% Similarity=0.431 Sum_probs=61.6
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceee
Q 002874 197 LFVRNINSNVEDLELRSLFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLD 262 (872)
Q Consensus 197 LfV~NLP~~vteeeLr~lFs~fG~I~~v~~-----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~ 262 (872)
|||+|||.++|+++|+++|++||.|..+++ .+.++|||||+|.+.++|++|++.|+|..+.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 799999999999999999999999999873 466899999999999999999999999999999874
No 139
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.40 E-value=2.5e-13 Score=115.69 Aligned_cols=71 Identities=17% Similarity=0.238 Sum_probs=64.4
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe---CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 195 RTLFVRNINSNVEDLELRSLFEQYGDIRTLYT---ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 195 rtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~---~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
++|||+|||+++++++|+++|++||+|..|++ ....++||||+|.+.++|++|+. ++++.|.|++|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 58999999999999999999999999999874 33456899999999999999996 8999999999999864
No 140
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=8.3e-14 Score=117.32 Aligned_cols=66 Identities=24% Similarity=0.408 Sum_probs=61.3
Q ss_pred eeeeccCCccchhhHhhhhcccCCeEEEEe-----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEE
Q 002874 282 LVVFNLDASVSNDDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIK 347 (872)
Q Consensus 282 LfV~NLp~~~teedLre~Fs~fG~V~~vri-----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~ 347 (872)
|||+|||.++|+++|+++|++||.|..+++ ++.++|||||+|.+.++|++|++.|||+.|+|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 799999999999999999999999999865 345789999999999999999999999999998874
No 141
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.39 E-value=4.2e-13 Score=118.08 Aligned_cols=78 Identities=14% Similarity=0.162 Sum_probs=69.8
Q ss_pred CCCCCcEEEEcCCCCC-CCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHh--cCcccccceeeeeec
Q 002874 190 GEHPSRTLFVRNINSN-VEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRAL--QNKPLRRRKLDIHFS 266 (872)
Q Consensus 190 ~e~~srtLfV~NLP~~-vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~L--ng~~l~gr~L~V~~a 266 (872)
...++++|||+|||.. +|++||+++|++||+|..|.+. +.+++|||+|.+.++|..|++.+ ++..+.|++|+|.|+
T Consensus 4 ~~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~-~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s 82 (89)
T d1x4da1 4 RVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLIL-NKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLS 82 (89)
T ss_dssp CCCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEEC-SSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEE
T ss_pred CCCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEee-ccceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEEC
Confidence 3467899999999986 8899999999999999999864 56889999999999999999976 567799999999998
Q ss_pred CC
Q 002874 267 IP 268 (872)
Q Consensus 267 ~p 268 (872)
..
T Consensus 83 ~~ 84 (89)
T d1x4da1 83 QK 84 (89)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 142
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.38 E-value=6.3e-13 Score=120.12 Aligned_cols=79 Identities=16% Similarity=0.174 Sum_probs=70.9
Q ss_pred ccccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHh--CCceeCCcEEEEEecCCC
Q 002874 277 VNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRAL--NRSDINGKRIKLEPSRPG 354 (872)
Q Consensus 277 ~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~L--nG~~l~Gr~L~V~~s~p~ 354 (872)
....+|||+|||..+++++|+++|++||.|+.+++. +.+++|||+|.+.++|++|++.| ++..++|++|+|.|++.+
T Consensus 13 ~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~-~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~~ 91 (104)
T d1wexa_ 13 SVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMM-PFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTSK 91 (104)
T ss_dssp CCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEE-TTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSSS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEE-ecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCCC
Confidence 356799999999999999999999999999999885 46799999999999999999988 556789999999999765
Q ss_pred cc
Q 002874 355 GA 356 (872)
Q Consensus 355 ~~ 356 (872)
..
T Consensus 92 ~~ 93 (104)
T d1wexa_ 92 RI 93 (104)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 143
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.38 E-value=3.6e-13 Score=120.82 Aligned_cols=79 Identities=15% Similarity=0.190 Sum_probs=70.1
Q ss_pred CCCCCcEEEEcCCCCC-CCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHH--HhcCcccccceeeeeec
Q 002874 190 GEHPSRTLFVRNINSN-VEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMR--ALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 190 ~e~~srtLfV~NLP~~-vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~--~Lng~~l~gr~L~V~~a 266 (872)
...++++|||+|||.+ +|+++|+++|++||.|.+|.+. +.+|||||+|.+.++|.+|++ .+++..+.|++|+|.|+
T Consensus 14 ~~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~-~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s 92 (99)
T d1x4fa1 14 KQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILM-RMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLS 92 (99)
T ss_dssp SSCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEE-TTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEE
T ss_pred CCCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEe-ecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEc
Confidence 3456799999999985 8999999999999999999764 678999999999999999998 46788899999999999
Q ss_pred CCC
Q 002874 267 IPK 269 (872)
Q Consensus 267 ~pk 269 (872)
..+
T Consensus 93 ~~~ 95 (99)
T d1x4fa1 93 EKY 95 (99)
T ss_dssp CSC
T ss_pred CCc
Confidence 644
No 144
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.38 E-value=3.7e-13 Score=120.72 Aligned_cols=78 Identities=19% Similarity=0.189 Sum_probs=69.4
Q ss_pred ccccceeeeccCCc-cchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHH--HhCCceeCCcEEEEEecCC
Q 002874 277 VNQGTLVVFNLDAS-VSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALR--ALNRSDINGKRIKLEPSRP 353 (872)
Q Consensus 277 ~~~~tLfV~NLp~~-~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~--~LnG~~l~Gr~L~V~~s~p 353 (872)
...++|||+|||.+ +|+++|+++|++||.|.++++. ..+|+|||+|.+.++|.+|++ .+++..|+|++|+|.+|+.
T Consensus 16 ~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~-~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~~ 94 (99)
T d1x4fa1 16 ELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILM-RMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEK 94 (99)
T ss_dssp CCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEE-TTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEECS
T ss_pred CCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEe-ecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcCC
Confidence 34578999999985 8999999999999999999885 457999999999999999998 5788899999999999976
Q ss_pred Cc
Q 002874 354 GG 355 (872)
Q Consensus 354 ~~ 355 (872)
+.
T Consensus 95 ~~ 96 (99)
T d1x4fa1 95 YK 96 (99)
T ss_dssp CS
T ss_pred cc
Confidence 53
No 145
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.37 E-value=1.9e-13 Score=119.01 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=66.6
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEE---EE--eCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRT---LY--TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~---v~--~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
...++|||+|||++++++||+++|+.||.|.. +. .++.++|+|||+|.+.++|++|++.|++..+.|++|+|.++
T Consensus 7 p~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 7 PGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp CSSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 34578999999999999999999999998743 21 35678999999999999999999999999999999999864
No 146
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=9.2e-13 Score=118.92 Aligned_cols=79 Identities=11% Similarity=0.151 Sum_probs=70.0
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEE-----eCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeee
Q 002874 191 EHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 265 (872)
Q Consensus 191 e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~-----~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~ 265 (872)
...+.+|||+|||+++|++||+++|..||.|..+. ..++++|||||+|.++++|++|++ +++..|.|+.|.|.+
T Consensus 12 ~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~ 90 (104)
T d1wg5a_ 12 TANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFK 90 (104)
T ss_dssp CSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEE
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEE
Confidence 44567899999999999999999999999987754 246788999999999999999996 999999999999999
Q ss_pred cCCCC
Q 002874 266 SIPKD 270 (872)
Q Consensus 266 a~pk~ 270 (872)
+.+++
T Consensus 91 ~~~~~ 95 (104)
T d1wg5a_ 91 SSRAE 95 (104)
T ss_dssp ECTTT
T ss_pred CCHHH
Confidence 87654
No 147
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.37 E-value=1.7e-13 Score=119.36 Aligned_cols=74 Identities=23% Similarity=0.292 Sum_probs=65.8
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEE-EE----eCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKE-IR----ETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~-vr----i~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
...+|||+|||+++++++|+++|+.||.|.. +. .++.++|+|||+|.+.++|++|++.|||+.|.||+|+|+++
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 3567999999999999999999999998754 22 24677899999999999999999999999999999999875
No 148
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=6.4e-13 Score=119.99 Aligned_cols=79 Identities=20% Similarity=0.250 Sum_probs=69.5
Q ss_pred ccccceeeeccCCccchhhHhhhhcccCCeEEEE-e----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 277 VNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIR-E----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 277 ~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vr-i----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
.+..+|||+|||+++|+++|+++|+.||.|..+. + ++.++|||||+|.+.++|++|++ +|+..|+||.|+|.++
T Consensus 13 ~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~ 91 (104)
T d1wg5a_ 13 ANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKS 91 (104)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEE
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEEC
Confidence 3456899999999999999999999999887743 2 45678999999999999999996 9999999999999999
Q ss_pred CCCcc
Q 002874 352 RPGGA 356 (872)
Q Consensus 352 ~p~~~ 356 (872)
.+...
T Consensus 92 ~~~~~ 96 (104)
T d1wg5a_ 92 SRAEV 96 (104)
T ss_dssp CTTTS
T ss_pred CHHHh
Confidence 87653
No 149
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=7e-13 Score=119.38 Aligned_cols=81 Identities=10% Similarity=0.224 Sum_probs=69.3
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEE---eCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeee
Q 002874 189 YGEHPSRTLFVRNINSNVEDLELRSLFEQYGDIRTLY---TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 265 (872)
Q Consensus 189 ~~e~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~---~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~ 265 (872)
.......+|||+|||+++|++||+++|+.||.+.... ..+..+|||||+|.+.++|++|++ +++..|.||.|+|.+
T Consensus 10 ~~~~~~~~v~v~nLp~~~te~dl~~~F~~~~~~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~ 88 (102)
T d1weza_ 10 FQSTTGHCVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFL 88 (102)
T ss_dssp CCCSSSCEEEEESCCTTCCHHHHHHSSCSCCCSEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEE
T ss_pred CcCCCCCEEEEeCCCCcCCHHHHHHHHhccCcceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 3445668999999999999999999999999653222 356689999999999999999986 899999999999999
Q ss_pred cCCCC
Q 002874 266 SIPKD 270 (872)
Q Consensus 266 a~pk~ 270 (872)
+.++.
T Consensus 89 s~~~~ 93 (102)
T d1weza_ 89 NSTAG 93 (102)
T ss_dssp ECCCC
T ss_pred cCCCC
Confidence 87654
No 150
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=4.6e-13 Score=120.59 Aligned_cols=79 Identities=13% Similarity=0.201 Sum_probs=68.1
Q ss_pred ccccceeeeccCCccchhhHhhhhcccCCeEEEEe----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 277 VNQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 277 ~~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
....+|||+|||+++|+++|+++|+.||.+ .|++ .+..+|||||+|.+.++|++|++ ||+..|+||.|+|.++.
T Consensus 13 ~~~~~v~v~nLp~~~te~dl~~~F~~~~~~-~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~ 90 (102)
T d1weza_ 13 TTGHCVHMRGLPYRATENDIYNFFSPLNPM-RVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLNS 90 (102)
T ss_dssp SSSCEEEEESCCTTCCHHHHHHSSCSCCCS-EEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEEC
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHhccCcc-eeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEcC
Confidence 345689999999999999999999999854 3432 45668999999999999999986 89999999999999998
Q ss_pred CCccc
Q 002874 353 PGGAR 357 (872)
Q Consensus 353 p~~~r 357 (872)
+....
T Consensus 91 ~~~~~ 95 (102)
T d1weza_ 91 TAGTS 95 (102)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 76543
No 151
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35 E-value=2.6e-13 Score=119.36 Aligned_cols=72 Identities=18% Similarity=0.316 Sum_probs=63.8
Q ss_pred CCcEEEEcCCCCCCCHHHH---HHHhhccCCeEEEEeC--------CCcccEEEEEeCCHHHHHHHHHHhcCccccccee
Q 002874 193 PSRTLFVRNINSNVEDLEL---RSLFEQYGDIRTLYTA--------CKHRGFVMISYYDIRAARTAMRALQNKPLRRRKL 261 (872)
Q Consensus 193 ~srtLfV~NLP~~vteeeL---r~lFs~fG~I~~v~~~--------~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L 261 (872)
..++|||+|||+++++++| +++|++||+|..|.+. ...+|||||+|.+.++|.+|++.|||..+.|++|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 3578999999999999999 6789999999999741 2245899999999999999999999999999999
Q ss_pred eee
Q 002874 262 DIH 264 (872)
Q Consensus 262 ~V~ 264 (872)
+|.
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 873
No 152
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35 E-value=1.2e-12 Score=115.06 Aligned_cols=76 Identities=17% Similarity=0.233 Sum_probs=68.7
Q ss_pred cccceeeeccCCc-cchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHh--CCceeCCcEEEEEecCCC
Q 002874 278 NQGTLVVFNLDAS-VSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRAL--NRSDINGKRIKLEPSRPG 354 (872)
Q Consensus 278 ~~~tLfV~NLp~~-~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~L--nG~~l~Gr~L~V~~s~p~ 354 (872)
..++|||+|||.. +|++||.++|++||.|..|++. ..+++|||+|++.++|.+|++.| ++..+.|++|+|.||++.
T Consensus 7 ~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~-~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~~~ 85 (89)
T d1x4da1 7 TRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLIL-NKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 85 (89)
T ss_dssp CCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEEC-SSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEECCC
T ss_pred CCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEee-ccceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECCCc
Confidence 4678999999986 8999999999999999999986 35689999999999999999966 678999999999999754
No 153
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.33 E-value=4.1e-13 Score=121.65 Aligned_cols=79 Identities=16% Similarity=0.188 Sum_probs=69.9
Q ss_pred cccceeeeccCCccch-----hhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSN-----DDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~te-----edLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
...+|||+||+.++.. ++|+++|++||.|+++++. ++++||||+|.+.++|.+|++.|||..|.|++|+|.|++
T Consensus 4 ~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~-k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~ 82 (104)
T d1weya_ 4 GSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYF-KSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQ 82 (104)
T ss_dssp CCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEE-TTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCC
T ss_pred CCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEe-cCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecc
Confidence 3568999999998743 4588999999999999875 568899999999999999999999999999999999998
Q ss_pred CCccc
Q 002874 353 PGGAR 357 (872)
Q Consensus 353 p~~~r 357 (872)
+....
T Consensus 83 ~~~~~ 87 (104)
T d1weya_ 83 TLHIG 87 (104)
T ss_dssp CSSCC
T ss_pred cCCCC
Confidence 76543
No 154
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.31 E-value=6.2e-13 Score=120.49 Aligned_cols=79 Identities=20% Similarity=0.193 Sum_probs=70.2
Q ss_pred CCCcEEEEcCCCCCC-C----HHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 192 HPSRTLFVRNINSNV-E----DLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 192 ~~srtLfV~NLP~~v-t----eeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
..+++|||+||+.++ + +++|+++|++||+|.+++.. ++++||||+|.+.++|.+|++.|+|..|.|++|+|.|+
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~-k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a 81 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYF-KSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFA 81 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEE-TTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEe-cCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeec
Confidence 457899999999886 3 35699999999999999764 78999999999999999999999999999999999999
Q ss_pred CCCCC
Q 002874 267 IPKDN 271 (872)
Q Consensus 267 ~pk~~ 271 (872)
.+...
T Consensus 82 ~~~~~ 86 (104)
T d1weya_ 82 QTLHI 86 (104)
T ss_dssp CCSSC
T ss_pred ccCCC
Confidence 76543
No 155
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28 E-value=1.2e-12 Score=117.76 Aligned_cols=75 Identities=16% Similarity=0.222 Sum_probs=66.6
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEE-EE----eCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRT-LY----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~-v~----~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
...++|||+|||+++|+++|+++|+.||.|.. +. ..++++|||||+|.+.++|++|++ |++..|.|+.|.|.++
T Consensus 6 ~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~ 84 (103)
T d2cpya1 6 SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVV 84 (103)
T ss_dssp SCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEE
T ss_pred CCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEEC
Confidence 44678999999999999999999999998754 22 356789999999999999999996 9999999999999986
Q ss_pred C
Q 002874 267 I 267 (872)
Q Consensus 267 ~ 267 (872)
.
T Consensus 85 ~ 85 (103)
T d2cpya1 85 T 85 (103)
T ss_dssp C
T ss_pred C
Confidence 4
No 156
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28 E-value=8.2e-13 Score=118.91 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=66.3
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEE-EEe----CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecCC
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKE-IRE----TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSRP 353 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~-vri----~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~p 353 (872)
..+|||+|||+++|+++|+++|+.||.|.. +.+ .+.++|||||+|.+.++|++|++ |||..|+|+.|.|.++.+
T Consensus 8 ~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~~ 86 (103)
T d2cpya1 8 KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVTL 86 (103)
T ss_dssp CCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEECH
T ss_pred ceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECCH
Confidence 568999999999999999999999998765 332 45679999999999999999996 999999999999998754
Q ss_pred C
Q 002874 354 G 354 (872)
Q Consensus 354 ~ 354 (872)
.
T Consensus 87 ~ 87 (103)
T d2cpya1 87 E 87 (103)
T ss_dssp H
T ss_pred H
Confidence 3
No 157
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=2.9e-13 Score=118.94 Aligned_cols=71 Identities=17% Similarity=0.322 Sum_probs=63.3
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEE----------eCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeee
Q 002874 195 RTLFVRNINSNVEDLELRSLFEQYGDIRTLY----------TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIH 264 (872)
Q Consensus 195 rtLfV~NLP~~vteeeLr~lFs~fG~I~~v~----------~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~ 264 (872)
|+|||+|||+++|+++|+++|++||.|..+. ...+++|||||+|.+.++|++|++ |+|..+.|++|+|.
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 7899999999999999999999999875443 235689999999999999999995 99999999999997
Q ss_pred ec
Q 002874 265 FS 266 (872)
Q Consensus 265 ~a 266 (872)
.+
T Consensus 81 r~ 82 (90)
T d1u2fa_ 81 RP 82 (90)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 158
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=2.2e-12 Score=116.81 Aligned_cols=72 Identities=24% Similarity=0.286 Sum_probs=67.4
Q ss_pred cceeeeccCCccchhhHhhhhcccCCeEEEEeC----CCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEec
Q 002874 280 GTLVVFNLDASVSNDDLRQIFGAYGEVKEIRET----PHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPS 351 (872)
Q Consensus 280 ~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~----~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s 351 (872)
..++|+++..++++++|+++|++||.|.+|++. ++++|+|||+|.+.++|.+|++.|||+.++||+|+|+|+
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 469999999999999999999999999999873 567899999999999999999999999999999999986
No 159
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=1.6e-11 Score=110.46 Aligned_cols=66 Identities=18% Similarity=0.327 Sum_probs=59.9
Q ss_pred CCCCcEEEEcC--CCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccc
Q 002874 191 EHPSRTLFVRN--INSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLR 257 (872)
Q Consensus 191 e~~srtLfV~N--LP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~ 257 (872)
..++++|+|.| ||.++|+++|+++|++||.|..|++. +.++||||+|.+.++|.+|++.|+|+.+.
T Consensus 15 ~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~-~~k~~aFV~f~~~e~A~~A~~~lng~~i~ 82 (101)
T d2cq2a1 15 SYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMP-PNKPYSFARYRTTEESKRAYVTLNGKEVV 82 (101)
T ss_dssp SSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECC-TTCSCEEEEESSHHHHHHHHHHTTTCEEE
T ss_pred CCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeec-cCccEEEEEECCHHHHHHHHHHhCCCCCC
Confidence 45788999965 99999999999999999999999754 67899999999999999999999999873
No 160
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=5.6e-12 Score=115.33 Aligned_cols=76 Identities=9% Similarity=0.171 Sum_probs=66.9
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEE---E--eCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 192 HPSRTLFVRNINSNVEDLELRSLFEQYGDIRTL---Y--TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 192 ~~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v---~--~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
...++|||+|||+++|+++|+++|+.||.|..+ . ..+..+|||||+|.+.++|++|++ |++..|+|+.|.|..+
T Consensus 16 ~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~ 94 (112)
T d1wela1 16 EAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPI 94 (112)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEE
T ss_pred CCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEc
Confidence 456799999999999999999999999987432 1 467889999999999999999996 9999999999999887
Q ss_pred CC
Q 002874 267 IP 268 (872)
Q Consensus 267 ~p 268 (872)
.+
T Consensus 95 ~~ 96 (112)
T d1wela1 95 TK 96 (112)
T ss_dssp CH
T ss_pred Ch
Confidence 43
No 161
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=2.4e-12 Score=117.83 Aligned_cols=77 Identities=17% Similarity=0.209 Sum_probs=67.2
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEE-----EeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEI-----RETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~v-----ri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
...+|||+|||+++|+++|+++|+.||.|..+ ...+.++|||||+|.+.++|++|++ |||..|+|+.|+|..+.
T Consensus 17 ~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~~ 95 (112)
T d1wela1 17 AGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPIT 95 (112)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEEC
T ss_pred CCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEcC
Confidence 35689999999999999999999999987542 2356778999999999999999996 99999999999999886
Q ss_pred CCc
Q 002874 353 PGG 355 (872)
Q Consensus 353 p~~ 355 (872)
+..
T Consensus 96 ~~~ 98 (112)
T d1wela1 96 KKG 98 (112)
T ss_dssp HHH
T ss_pred hHH
Confidence 654
No 162
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.16 E-value=5.1e-13 Score=117.35 Aligned_cols=71 Identities=17% Similarity=0.333 Sum_probs=62.3
Q ss_pred cceeeeccCCccchhhHhhhhcccCCeEEEEe----------CCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEEE
Q 002874 280 GTLVVFNLDASVSNDDLRQIFGAYGEVKEIRE----------TPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKLE 349 (872)
Q Consensus 280 ~tLfV~NLp~~~teedLre~Fs~fG~V~~vri----------~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~ 349 (872)
++|||+|||.++|+++|+++|+.||.|..+.+ +++++|||||+|.+.++|++|++ |||..+.|++|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 57999999999999999999999998765532 23568999999999999999995 99999999999996
Q ss_pred ec
Q 002874 350 PS 351 (872)
Q Consensus 350 ~s 351 (872)
.+
T Consensus 81 r~ 82 (90)
T d1u2fa_ 81 RP 82 (90)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 163
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=3.5e-11 Score=107.73 Aligned_cols=82 Identities=18% Similarity=0.276 Sum_probs=70.8
Q ss_pred CCCCCCcEEEEcCC--CCCCC---------HHHHHHHhhccCCeEEEEe-CCCcccEEEEEeCCHHHHHHHHHHhcCccc
Q 002874 189 YGEHPSRTLFVRNI--NSNVE---------DLELRSLFEQYGDIRTLYT-ACKHRGFVMISYYDIRAARTAMRALQNKPL 256 (872)
Q Consensus 189 ~~e~~srtLfV~NL--P~~vt---------eeeLr~lFs~fG~I~~v~~-~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l 256 (872)
...+.+++|+|+|| |.++. +++|++.|++||.|..|++ ....+|+|||+|.+.++|.+|+..|+|+.+
T Consensus 3 ~~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~ 82 (99)
T d2dita1 3 SRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWF 82 (99)
T ss_dssp CCCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEE
T ss_pred CCCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEE
Confidence 34567899999999 65432 3689999999999999884 556789999999999999999999999999
Q ss_pred ccceeeeeecCCCC
Q 002874 257 RRRKLDIHFSIPKD 270 (872)
Q Consensus 257 ~gr~L~V~~a~pk~ 270 (872)
.|++|.|++..++.
T Consensus 83 ~gr~i~v~~~~g~~ 96 (99)
T d2dita1 83 GGRQITAQAWDGTT 96 (99)
T ss_dssp TTEECEEEECCSCC
T ss_pred CCEEEEEEEeCCcC
Confidence 99999999987654
No 164
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.13 E-value=3.8e-11 Score=107.88 Aligned_cols=66 Identities=21% Similarity=0.316 Sum_probs=58.6
Q ss_pred cccceeeec--cCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCcee-CCc
Q 002874 278 NQGTLVVFN--LDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDI-NGK 344 (872)
Q Consensus 278 ~~~tLfV~N--Lp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l-~Gr 344 (872)
...+|+|.| |+.++|+++|+++|++||.|+.|++. ..++||||+|.+.++|.+|++.|||+.| +++
T Consensus 17 pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~-~~k~~aFV~f~~~e~A~~A~~~lng~~i~~~~ 85 (101)
T d2cq2a1 17 ATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMP-PNKPYSFARYRTTEESKRAYVTLNGKEVVDDL 85 (101)
T ss_dssp CCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECC-TTCSCEEEEESSHHHHHHHHHHTTTCEEECTT
T ss_pred CCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeec-cCccEEEEEECCHHHHHHHHHHhCCCCCCCCC
Confidence 356788866 99999999999999999999999886 4578999999999999999999999977 443
No 165
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=5.1e-11 Score=106.58 Aligned_cols=79 Identities=15% Similarity=0.278 Sum_probs=68.2
Q ss_pred ccccceeeecc--CCcc---------chhhHhhhhcccCCeEEEEe-CCCCccEEEEEECCHHHHHHHHHHhCCceeCCc
Q 002874 277 VNQGTLVVFNL--DASV---------SNDDLRQIFGAYGEVKEIRE-TPHKRHHKFIEFYDVRAAEAALRALNRSDINGK 344 (872)
Q Consensus 277 ~~~~tLfV~NL--p~~~---------teedLre~Fs~fG~V~~vri-~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr 344 (872)
...++|+|+|+ +.++ .+++|++.|++||.|..|++ .++.+|++||+|.+.++|.+|++.|||+.++||
T Consensus 6 ~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~~gr 85 (99)
T d2dita1 6 RHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGR 85 (99)
T ss_dssp CSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEETTE
T ss_pred CCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEECCE
Confidence 34678999998 5443 23689999999999999976 456689999999999999999999999999999
Q ss_pred EEEEEecCCCc
Q 002874 345 RIKLEPSRPGG 355 (872)
Q Consensus 345 ~L~V~~s~p~~ 355 (872)
+|+|++..++.
T Consensus 86 ~i~v~~~~g~~ 96 (99)
T d2dita1 86 QITAQAWDGTT 96 (99)
T ss_dssp ECEEEECCSCC
T ss_pred EEEEEEeCCcC
Confidence 99999987654
No 166
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=3.1e-11 Score=110.52 Aligned_cols=77 Identities=18% Similarity=0.178 Sum_probs=67.7
Q ss_pred cceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCH-HHHHHHHHHhCCceeCCcEEEEEecCCCccc
Q 002874 280 GTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDV-RAAEAALRALNRSDINGKRIKLEPSRPGGAR 357 (872)
Q Consensus 280 ~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~-e~A~kAl~~LnG~~l~Gr~L~V~~s~p~~~r 357 (872)
-.+||+|||+.+|+++|+++|++||.|.+|++. +.++||||+|.+. ++|.+|+..|++..+.++.+.|.++...+..
T Consensus 12 ~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~-~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~~~~~ 89 (113)
T d1owxa_ 12 LLKFSGDLDDQTCREDLHILFSNHGEIKWIDFV-RGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVLEGEV 89 (113)
T ss_dssp EEEEEESCCSSCCHHHHHHHTCSSCCEEEEECC-TTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEECCHHH
T ss_pred eEEEECCCCCCCCHHHHHHHHHhcCChheEEEe-cCCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeeccchh
Confidence 457999999999999999999999999999986 5689999999985 7899999999999998888888777665443
No 167
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=7.5e-11 Score=107.94 Aligned_cols=74 Identities=15% Similarity=0.223 Sum_probs=66.0
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCH-HHHHHHHHHhcCcccccceeeeeecCC
Q 002874 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDI-RAARTAMRALQNKPLRRRKLDIHFSIP 268 (872)
Q Consensus 194 srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~-e~A~~Ai~~Lng~~l~gr~L~V~~a~p 268 (872)
...+||+|||..+|+++|+++|++||+|..|.+. +.+|||||.|.++ ++|..|+..+++..+.++.+.|.|...
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~-~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~ 85 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFV-RGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVL 85 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECC-TTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEEC
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcCChheEEEe-cCCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeec
Confidence 4567999999999999999999999999999865 6799999999995 789999999999999888888877643
No 168
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=1.2e-11 Score=111.92 Aligned_cols=72 Identities=14% Similarity=0.212 Sum_probs=67.0
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe----CCCcccEEEEEeCCHHHHHHHHHHhcCcccccceeeeeec
Q 002874 195 RTLFVRNINSNVEDLELRSLFEQYGDIRTLYT----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 266 (872)
Q Consensus 195 rtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~----~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a 266 (872)
+.++|++++.+++|++|+++|++||+|.+|++ ++.++|||||+|.+.++|++|++.|+|+.+.|++|.|+|+
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 45888999999999999999999999999985 4678999999999999999999999999999999999986
No 169
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.07 E-value=1.2e-10 Score=100.40 Aligned_cols=74 Identities=16% Similarity=0.196 Sum_probs=64.1
Q ss_pred cccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcE-EEEEecCCC
Q 002874 278 NQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKR-IKLEPSRPG 354 (872)
Q Consensus 278 ~~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~-L~V~~s~p~ 354 (872)
+.+.|+|.++|++++++.| ++|++||+|.++++. +.++||||+|.+.++|++||+ +||..|+|+. |.|.++..+
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~-~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~~k 77 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCIDK 77 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEEC-SSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECCCH
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheEEec-CCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCCCh
Confidence 4567999999999997655 579999999999974 568999999999999999996 9999999985 678887664
No 170
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.95 E-value=4.1e-10 Score=97.05 Aligned_cols=71 Identities=18% Similarity=0.218 Sum_probs=61.7
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccce-eeeeecC
Q 002874 194 SRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRK-LDIHFSI 267 (872)
Q Consensus 194 srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~-L~V~~a~ 267 (872)
++.|+|.++|++++++.| ++|++||+|.+++. .+.+|||||+|.++++|++|++ ++|..|.|+. |.|....
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~-~~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~ 75 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQYGNILKHVM-SNTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCI 75 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEE-CSSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECC
T ss_pred ccEEEEECCChHHHHHHH-HHHHhhhhhheEEe-cCCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCC
Confidence 578999999999987655 57999999999975 4778999999999999999996 9999999984 5687664
No 171
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=5.3e-10 Score=100.66 Aligned_cols=76 Identities=21% Similarity=0.319 Sum_probs=64.4
Q ss_pred cccceeeecc--CCcc--------chhhHhhhhcccCCeEEEEeCC-------CCccEEEEEECCHHHHHHHHHHhCCce
Q 002874 278 NQGTLVVFNL--DASV--------SNDDLRQIFGAYGEVKEIRETP-------HKRHHKFIEFYDVRAAEAALRALNRSD 340 (872)
Q Consensus 278 ~~~tLfV~NL--p~~~--------teedLre~Fs~fG~V~~vri~~-------~skG~gFVeF~~~e~A~kAl~~LnG~~ 340 (872)
++++|.|.|+ +..+ ..+||++.|++||.|++|.+.. ...|++||+|.+.++|.+|++.|||+.
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 3568999998 3332 3467999999999999998732 235899999999999999999999999
Q ss_pred eCCcEEEEEecCC
Q 002874 341 INGKRIKLEPSRP 353 (872)
Q Consensus 341 l~Gr~L~V~~s~p 353 (872)
++||+|+|.+..+
T Consensus 83 f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 83 FANRVVVTKYCDP 95 (104)
T ss_dssp SSSSCCEEEEECH
T ss_pred ECCeEEEEEEcCH
Confidence 9999999999864
No 172
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=1.6e-09 Score=97.46 Aligned_cols=76 Identities=16% Similarity=0.337 Sum_probs=65.4
Q ss_pred CCCcEEEEcCC--CCCCC--------HHHHHHHhhccCCeEEEEeC-------CCcccEEEEEeCCHHHHHHHHHHhcCc
Q 002874 192 HPSRTLFVRNI--NSNVE--------DLELRSLFEQYGDIRTLYTA-------CKHRGFVMISYYDIRAARTAMRALQNK 254 (872)
Q Consensus 192 ~~srtLfV~NL--P~~vt--------eeeLr~lFs~fG~I~~v~~~-------~~srG~AFVeF~~~e~A~~Ai~~Lng~ 254 (872)
.|+++|.|+|| |..+. .++|++.|++||.|.+|.+. ....|++||+|.+.++|.+|+..|+|+
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 46899999999 55443 45789999999999999852 234589999999999999999999999
Q ss_pred ccccceeeeeecC
Q 002874 255 PLRRRKLDIHFSI 267 (872)
Q Consensus 255 ~l~gr~L~V~~a~ 267 (872)
.+.||+|.+.|..
T Consensus 82 ~f~gR~v~v~f~~ 94 (104)
T d1o0pa_ 82 KFANRVVVTKYCD 94 (104)
T ss_dssp CSSSSCCEEEEEC
T ss_pred EECCeEEEEEEcC
Confidence 9999999999974
No 173
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79 E-value=7.5e-09 Score=90.58 Aligned_cols=84 Identities=21% Similarity=0.343 Sum_probs=72.3
Q ss_pred eeEEeecCCCCCCHHHHHHHHhhcCCceeeEE-Eeeecccccce-eEEEEEeccChhHHHHHHHHhcCCcccCCCC-ccE
Q 002874 713 TTLMIKNIPNKYTSKMLLAAIDENHRGTYDFL-YLPIDFKNKCN-VGYAFINMVSPSHIISFYEAFNGKKWEKFNS-EKV 789 (872)
Q Consensus 713 TTvMirNIPnk~t~~~L~~~id~~~~~~ydf~-Ylp~df~~~~n-~gyaFinf~~~~~~~~f~~~f~g~~w~~~~s-~k~ 789 (872)
|.|.||++|+.+|++.+++.|+ ..+++||+ |.|-+...+-+ -..|||||.+++++..|.+.|+|+.+-.-+. +-.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~--~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~ 79 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQ--PMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYP 79 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHC--SCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEE
T ss_pred ceEEEecCCCCCCHHHHHHHhC--CcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEee
Confidence 8999999999999999999998 47899999 57777776544 4789999999999999999999999986543 468
Q ss_pred EEEEeeecc
Q 002874 790 ASLAYARIQ 798 (872)
Q Consensus 790 ~~v~~A~iQ 798 (872)
+.|.||--|
T Consensus 80 a~VE~AP~q 88 (91)
T d1uw4a_ 80 AIVEFAPFQ 88 (91)
T ss_dssp CEEEECSSC
T ss_pred eEEEEcCcc
Confidence 899999776
No 174
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.65 E-value=0.0019 Score=52.64 Aligned_cols=60 Identities=23% Similarity=0.409 Sum_probs=53.3
Q ss_pred hhhHhhhhcccCCeEEEEeCCCCcc--EEEEEECCHHHHHHHHHHhCCceeCCcEEEEEecC
Q 002874 293 NDDLRQIFGAYGEVKEIRETPHKRH--HKFIEFYDVRAAEAALRALNRSDINGKRIKLEPSR 352 (872)
Q Consensus 293 eedLre~Fs~fG~V~~vri~~~skG--~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V~~s~ 352 (872)
.+-|.+.|+++|.|..+.+.+...+ .|-|...+.++|.-|+..|+.+.|++++|.|.++.
T Consensus 10 qq~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 10 QQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 3556788999999999999776654 69999999999999999999999999999999875
No 175
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.20 E-value=0.0032 Score=53.72 Aligned_cols=72 Identities=21% Similarity=0.384 Sum_probs=57.0
Q ss_pred cccceeeeccCCccc---------hhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhCCceeCCcEEEE
Q 002874 278 NQGTLVVFNLDASVS---------NDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDINGKRIKL 348 (872)
Q Consensus 278 ~~~tLfV~NLp~~~t---------eedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~LnG~~l~Gr~L~V 348 (872)
...||.|.=...+.. -.+|.+.|..||+|.-||+.. +.-.|+|.+-+.|.+|++ ++|.++.|+.|+|
T Consensus 14 pDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~---d~mwVTF~dG~SAL~al~-l~g~~v~G~~l~I 89 (95)
T d1ufwa_ 14 LDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQ---GQMLVTFADSHSALSVLD-VDGMKVKGRAVKI 89 (95)
T ss_dssp TTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEET---TEEEEECSCSHHHHHHHH-GGGSEETTEEEEE
T ss_pred CCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeC---CeEEEEECCcHHHHHHhc-cCCeEEcceEEEE
Confidence 456777754443332 256888999999999999864 457999999999999998 9999999999999
Q ss_pred EecCC
Q 002874 349 EPSRP 353 (872)
Q Consensus 349 ~~s~p 353 (872)
..-.|
T Consensus 90 t~~~~ 94 (95)
T d1ufwa_ 90 SGPSS 94 (95)
T ss_dssp ECCCC
T ss_pred ecCCC
Confidence 86544
No 176
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.86 E-value=0.011 Score=47.99 Aligned_cols=63 Identities=13% Similarity=0.236 Sum_probs=54.1
Q ss_pred CCCHHH----HHHHhhccCCeEEEEeCCCccc--EEEEEeCCHHHHHHHHHHhcCcccccceeeeeecC
Q 002874 205 NVEDLE----LRSLFEQYGDIRTLYTACKHRG--FVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 267 (872)
Q Consensus 205 ~vteee----Lr~lFs~fG~I~~v~~~~~srG--~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~V~~a~ 267 (872)
..++.+ |.+.|.++|.|.++.+.+.+.| .|-|...+..+|..|+..|+..++++++|.|.++.
T Consensus 3 ~L~~kelqq~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 3 RLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp TSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 344555 5578999999999998766665 79999999999999999999999999999999864
No 177
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.52 E-value=0.012 Score=50.41 Aligned_cols=73 Identities=5% Similarity=0.043 Sum_probs=58.0
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEE-eC------CCcccEEEEEeCCHHHHHHHHHHhcCcccccc-----eee
Q 002874 195 RTLFVRNINSNVEDLELRSLFEQYGDIRTLY-TA------CKHRGFVMISYYDIRAARTAMRALQNKPLRRR-----KLD 262 (872)
Q Consensus 195 rtLfV~NLP~~vteeeLr~lFs~fG~I~~v~-~~------~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr-----~L~ 262 (872)
++|.|+.||++.||+++.+.+...|++...+ .. ...-.-|||.|.+.++.....+..+|..|.+. +-.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~ 81 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAI 81 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeE
Confidence 6899999999999999999999999987765 11 11224699999999999999999999988542 345
Q ss_pred eeecC
Q 002874 263 IHFSI 267 (872)
Q Consensus 263 V~~a~ 267 (872)
|++|.
T Consensus 82 VE~AP 86 (91)
T d1uw4a_ 82 VEFAP 86 (91)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 56653
No 178
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.05 E-value=0.017 Score=49.26 Aligned_cols=71 Identities=18% Similarity=0.308 Sum_probs=57.2
Q ss_pred CCCcEEEEcCCCCCCCH---------HHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhcCcccccceee
Q 002874 192 HPSRTLFVRNINSNVED---------LELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLD 262 (872)
Q Consensus 192 ~~srtLfV~NLP~~vte---------eeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Lng~~l~gr~L~ 262 (872)
.++-||.|.=...+.++ .+|.+.|..||+|.-|+.. .+...|+|.+-+.|-+|+. +++.++.|+.|.
T Consensus 13 PpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv---~d~mwVTF~dG~SAL~al~-l~g~~v~G~~l~ 88 (95)
T d1ufwa_ 13 PLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRIN---QGQMLVTFADSHSALSVLD-VDGMKVKGRAVK 88 (95)
T ss_dssp CTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEE---TTEEEEECSCSHHHHHHHH-GGGSEETTEEEE
T ss_pred CCCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEe---CCeEEEEECCcHHHHHHhc-cCCeEEcceEEE
Confidence 56788888655544433 4688899999999888742 4568999999999999998 999999999999
Q ss_pred eeec
Q 002874 263 IHFS 266 (872)
Q Consensus 263 V~~a 266 (872)
|...
T Consensus 89 It~~ 92 (95)
T d1ufwa_ 89 ISGP 92 (95)
T ss_dssp EECC
T ss_pred EecC
Confidence 8753
No 179
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.76 E-value=1.3 Score=37.83 Aligned_cols=56 Identities=14% Similarity=0.279 Sum_probs=45.9
Q ss_pred ccceeeeccCCccchhhHhhhhcccCCeEEEEeCCCCccEEEEEECCHHHHHHHHHHhC
Q 002874 279 QGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALN 337 (872)
Q Consensus 279 ~~tLfV~NLp~~~teedLre~Fs~fG~V~~vri~~~skG~gFVeF~~~e~A~kAl~~Ln 337 (872)
..-||.-..|..+...||.++|++||.|.---+.. --|||...+.++|+.+++.+.
T Consensus 15 RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswIdd---TSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 15 RDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDD---TSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEEET---TEEEEECSCHHHHHHHHHHHH
T ss_pred cceeEEEeCCcccchhHHHHHhcCCCceEEEEecC---ceEEEEecCHHHHHHHHHHhc
Confidence 45688888999999999999999999875554432 259999999999999988654
No 180
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.49 E-value=1.7 Score=37.01 Aligned_cols=57 Identities=12% Similarity=0.219 Sum_probs=47.0
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeCCCcccEEEEEeCCHHHHHHHHHHhc
Q 002874 193 PSRTLFVRNINSNVEDLELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 252 (872)
Q Consensus 193 ~srtLfV~NLP~~vteeeLr~lFs~fG~I~~v~~~~~srG~AFVeF~~~e~A~~Ai~~Ln 252 (872)
....||.-..|..+...||.++|+.||.|.--.+. ..-|||...+.++|+.+++.+.
T Consensus 14 ~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswId---dTSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 14 KRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWID---DTSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEEE---TTEEEEECSCHHHHHHHHHHHH
T ss_pred CcceeEEEeCCcccchhHHHHHhcCCCceEEEEec---CceEEEEecCHHHHHHHHHHhc
Confidence 34579999999999999999999999987644442 3479999999999999987544
Done!