Query 002875
Match_columns 872
No_of_seqs 587 out of 5535
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 04:59:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.5E-65 5E-70 618.7 38.6 525 17-547 125-753 (768)
2 3rgz_A Protein brassinosteroid 100.0 1E-59 3.5E-64 567.8 36.4 517 10-534 94-717 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.6E-54 5.6E-59 518.0 44.5 522 18-539 25-627 (680)
4 3t6q_A CD180 antigen; protein- 100.0 8.1E-54 2.8E-58 505.2 39.6 509 7-523 26-572 (606)
5 1ziw_A TOLL-like receptor 3; i 100.0 4.5E-53 1.5E-57 505.7 44.6 510 11-523 44-635 (680)
6 3j0a_A TOLL-like receptor 5; m 100.0 1.7E-52 5.8E-57 510.1 40.8 492 17-516 23-565 (844)
7 3t6q_A CD180 antigen; protein- 100.0 6.2E-52 2.1E-56 489.0 41.7 515 19-539 13-565 (606)
8 3vq2_A TLR4, TOLL-like recepto 100.0 1E-51 3.6E-56 487.1 34.8 509 18-538 32-562 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 1.7E-51 5.7E-56 485.4 34.3 503 18-534 11-534 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 2.9E-49 1E-53 481.5 39.4 471 4-490 36-563 (844)
11 4gt4_A Tyrosine-protein kinase 100.0 5.3E-51 1.8E-55 430.8 18.2 245 612-868 30-305 (308)
12 4asz_A BDNF/NT-3 growth factor 100.0 4.7E-51 1.6E-55 429.3 16.3 245 612-868 17-288 (299)
13 4aoj_A High affinity nerve gro 100.0 1.4E-50 4.8E-55 431.8 18.1 245 612-868 45-318 (329)
14 3omv_A RAF proto-oncogene seri 100.0 2.8E-50 9.6E-55 422.9 17.6 247 612-868 40-299 (307)
15 3hmm_A TGF-beta receptor type- 100.0 7.2E-50 2.4E-54 423.9 17.0 254 612-868 7-296 (303)
16 4fih_A Serine/threonine-protei 100.0 1E-49 3.5E-54 423.6 15.6 242 612-863 78-324 (346)
17 2z63_A TOLL-like receptor 4, v 100.0 1.7E-47 5.7E-52 448.1 33.7 510 18-538 28-560 (570)
18 3fpq_A Serine/threonine-protei 100.0 5.1E-49 1.7E-53 410.4 15.7 243 612-863 30-283 (290)
19 4b9d_A Serine/threonine-protei 100.0 6.2E-49 2.1E-53 418.3 15.2 242 610-863 26-277 (350)
20 4g3f_A NF-kappa-beta-inducing 100.0 9.3E-49 3.2E-53 415.1 15.5 241 612-866 62-313 (336)
21 4fie_A Serine/threonine-protei 100.0 1.5E-48 5E-53 425.0 15.6 243 611-863 154-401 (423)
22 4ase_A Vascular endothelial gr 100.0 3.6E-48 1.2E-52 416.4 13.9 245 612-867 68-345 (353)
23 3hyh_A Carbon catabolite-derep 100.0 1.3E-47 4.5E-52 396.0 17.2 242 606-863 13-263 (275)
24 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.4E-48 1.2E-52 405.6 12.7 237 612-861 36-283 (311)
25 2z63_A TOLL-like receptor 4, v 100.0 9.7E-46 3.3E-50 433.2 31.1 475 6-492 42-536 (570)
26 2z81_A CD282 antigen, TOLL-lik 100.0 5.8E-46 2E-50 432.7 28.2 482 22-517 9-516 (549)
27 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-47 3.8E-52 402.1 10.6 240 611-863 27-282 (304)
28 4eco_A Uncharacterized protein 100.0 1.3E-46 4.3E-51 443.1 19.5 449 18-512 81-601 (636)
29 4g31_A Eukaryotic translation 100.0 3.7E-46 1.3E-50 392.9 16.0 241 607-863 6-280 (299)
30 4ecn_A Leucine-rich repeat pro 100.0 3.2E-45 1.1E-49 437.0 25.4 447 18-510 323-863 (876)
31 2z7x_B TOLL-like receptor 1, v 100.0 2.4E-45 8.1E-50 424.3 21.9 457 21-519 3-489 (520)
32 4eco_A Uncharacterized protein 100.0 3.8E-45 1.3E-49 430.5 23.6 461 42-537 81-603 (636)
33 2z81_A CD282 antigen, TOLL-lik 100.0 5.9E-45 2E-49 424.2 24.9 470 7-491 19-514 (549)
34 4g8a_A TOLL-like receptor 4; l 100.0 5.6E-43 1.9E-47 415.5 33.9 513 18-539 52-585 (635)
35 4ecn_A Leucine-rich repeat pro 100.0 1.8E-43 6.1E-48 422.0 26.4 463 42-538 323-870 (876)
36 2z7x_B TOLL-like receptor 1, v 100.0 8.2E-43 2.8E-47 403.1 23.0 452 45-539 3-486 (520)
37 4b99_A Mitogen-activated prote 100.0 5.7E-43 2E-47 382.9 20.1 249 611-863 57-345 (398)
38 4f9c_A Cell division cycle 7-r 100.0 4.6E-43 1.6E-47 379.8 16.9 194 606-806 21-251 (361)
39 3v5w_A G-protein coupled recep 100.0 1E-42 3.5E-47 395.4 15.9 244 608-863 191-450 (689)
40 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.1E-41 7.1E-46 394.5 24.5 461 19-520 32-519 (562)
41 3uto_A Twitchin; kinase, muscl 100.0 2.2E-42 7.7E-47 397.5 15.1 249 604-863 155-411 (573)
42 4g8a_A TOLL-like receptor 4; l 100.0 2.7E-40 9.1E-45 392.5 30.9 502 10-523 70-592 (635)
43 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-39 4E-44 379.8 26.4 456 40-538 29-514 (562)
44 2qkw_B Protein kinase; three-h 100.0 6.9E-40 2.4E-44 353.5 21.9 257 604-867 37-313 (321)
45 3uim_A Brassinosteroid insensi 100.0 5.8E-40 2E-44 355.1 18.8 259 606-868 30-310 (326)
46 3soc_A Activin receptor type-2 100.0 2.5E-40 8.5E-45 356.8 15.8 259 610-869 26-318 (322)
47 3v47_A TOLL-like receptor 5B a 100.0 7.2E-39 2.5E-43 363.7 27.9 392 45-518 13-415 (455)
48 3fxz_A Serine/threonine-protei 100.0 5.8E-40 2E-44 349.4 16.4 246 606-863 20-270 (297)
49 3sxs_A Cytoplasmic tyrosine-pr 100.0 9.6E-40 3.3E-44 342.8 16.6 249 612-872 12-267 (268)
50 1tki_A Titin; serine kinase, m 100.0 3E-40 1E-44 355.2 13.0 247 606-863 5-258 (321)
51 3fe3_A MAP/microtubule affinit 100.0 1E-39 3.5E-44 351.5 16.7 239 612-863 19-265 (328)
52 3s95_A LIMK-1, LIM domain kina 100.0 3.9E-39 1.3E-43 345.9 21.2 247 612-868 14-281 (310)
53 2yab_A Death-associated protei 100.0 1.1E-39 3.6E-44 355.5 16.6 251 602-863 8-273 (361)
54 2psq_A Fibroblast growth facto 100.0 3.1E-39 1.1E-43 354.4 20.2 244 612-867 85-362 (370)
55 3p86_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44 349.0 15.9 246 611-868 40-297 (309)
56 3zgw_A Maternal embryonic leuc 100.0 8.9E-40 3.1E-44 353.7 15.3 247 602-863 6-261 (347)
57 4hcu_A Tyrosine-protein kinase 100.0 1.2E-39 4.3E-44 342.1 15.6 247 612-870 14-267 (269)
58 3v47_A TOLL-like receptor 5B a 100.0 2.6E-38 8.9E-43 359.1 27.0 349 42-390 30-407 (455)
59 3q4u_A Activin receptor type-1 100.0 3.6E-39 1.2E-43 344.8 17.3 252 606-867 8-300 (301)
60 2c30_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 346.7 17.6 242 612-863 49-295 (321)
61 3soa_A Calcium/calmodulin-depe 100.0 7.2E-39 2.5E-43 358.1 19.8 251 602-863 7-268 (444)
62 2y0a_A Death-associated protei 100.0 5E-39 1.7E-43 346.8 16.8 251 602-863 7-272 (326)
63 3kul_A Ephrin type-A receptor 100.0 5.9E-39 2E-43 346.1 17.0 245 612-868 53-312 (325)
64 1qcf_A Haematopoetic cell kina 100.0 6.7E-39 2.3E-43 362.0 18.2 245 612-869 192-444 (454)
65 2qol_A Ephrin receptor; recept 100.0 6.1E-39 2.1E-43 352.2 17.2 244 612-867 49-307 (373)
66 3niz_A Rhodanese family protei 100.0 8.4E-39 2.9E-43 342.8 17.6 256 602-863 17-301 (311)
67 3cbl_A C-FES, proto-oncogene t 100.0 1.5E-39 5E-44 358.4 12.0 246 612-869 118-374 (377)
68 3gen_A Tyrosine-protein kinase 100.0 9.6E-39 3.3E-43 338.1 17.4 245 612-868 28-279 (283)
69 2bdw_A Hypothetical protein K1 100.0 8.8E-39 3E-43 349.5 17.3 249 604-863 27-285 (362)
70 1o6l_A RAC-beta serine/threoni 100.0 1.5E-38 5E-43 343.3 18.3 239 612-863 9-261 (337)
71 2x4f_A Myosin light chain kina 100.0 7.9E-39 2.7E-43 351.1 16.3 247 608-863 89-343 (373)
72 1opk_A P150, C-ABL, proto-onco 100.0 1.3E-38 4.6E-43 362.8 18.3 247 612-870 224-479 (495)
73 3c0i_A Peripheral plasma membr 100.0 6.2E-39 2.1E-43 349.8 14.7 246 606-863 24-287 (351)
74 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.3E-38 7.9E-43 341.4 18.6 238 612-863 13-259 (336)
75 4euu_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 338.9 20.9 254 611-867 12-307 (319)
76 3uc3_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 347.7 17.3 246 611-863 23-275 (361)
77 3l9p_A Anaplastic lymphoma kin 100.0 1E-38 3.6E-43 350.1 15.2 245 612-868 75-344 (367)
78 1jl5_A Outer protein YOPM; leu 100.0 2.6E-37 8.8E-42 347.6 26.8 289 17-368 10-311 (454)
79 4eqm_A Protein kinase; transfe 100.0 1.7E-38 5.8E-43 337.7 16.1 251 612-870 15-276 (294)
80 3vhe_A Vascular endothelial gr 100.0 8E-39 2.7E-43 351.3 14.0 249 607-868 23-354 (359)
81 3dtc_A Mitogen-activated prote 100.0 1E-38 3.5E-43 335.6 13.9 247 612-867 11-271 (271)
82 1k9a_A Carboxyl-terminal SRC k 100.0 2.4E-38 8.1E-43 356.8 17.9 243 612-869 197-445 (450)
83 2w4o_A Calcium/calmodulin-depe 100.0 1.3E-38 4.4E-43 346.8 15.2 247 606-863 53-306 (349)
84 3ugc_A Tyrosine-protein kinase 100.0 6.5E-39 2.2E-43 341.5 12.5 252 612-869 14-291 (295)
85 3qd2_B Eukaryotic translation 100.0 2.9E-38 1E-42 342.8 17.6 244 604-863 4-326 (332)
86 2nru_A Interleukin-1 receptor- 100.0 1.6E-37 5.3E-42 333.0 22.8 248 614-869 37-306 (307)
87 1kob_A Twitchin; kinase, intra 100.0 1.6E-38 5.4E-43 349.4 15.3 250 603-863 48-305 (387)
88 3mdy_A Bone morphogenetic prot 100.0 6E-38 2.1E-42 341.1 19.6 264 602-870 33-332 (337)
89 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.6E-38 8.9E-43 356.7 17.0 245 612-869 188-440 (452)
90 4fr4_A YANK1, serine/threonine 100.0 7.9E-38 2.7E-42 342.4 20.3 244 607-862 16-271 (384)
91 3tt0_A Basic fibroblast growth 100.0 4.7E-38 1.6E-42 347.2 18.2 244 612-867 73-350 (382)
92 3t9t_A Tyrosine-protein kinase 100.0 3E-38 1E-42 331.2 15.7 247 612-870 12-265 (267)
93 3tki_A Serine/threonine-protei 100.0 2.9E-38 1E-42 340.2 15.9 243 612-864 11-263 (323)
94 4dc2_A Protein kinase C IOTA t 100.0 4.6E-38 1.6E-42 345.4 17.7 245 612-863 56-319 (396)
95 3g2f_A Bone morphogenetic prot 100.0 4.6E-38 1.6E-42 341.8 16.9 255 612-867 17-316 (336)
96 3lb7_A RAF proto-oncogene seri 100.0 5.7E-38 1.9E-42 335.5 17.3 247 612-868 40-299 (307)
97 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.8E-38 6.3E-43 344.9 13.7 239 612-863 27-281 (353)
98 2pmi_A Negative RE, cyclin-dep 100.0 2.1E-37 7.3E-42 333.0 21.8 248 612-863 9-294 (317)
99 3kn6_A Ribosomal protein S6 ki 100.0 1.9E-38 6.6E-43 341.9 13.4 246 613-863 16-271 (325)
100 2ivs_A Proto-oncogene tyrosine 100.0 4.3E-38 1.5E-42 338.6 16.1 247 612-870 27-312 (314)
101 1luf_A Muscle-specific tyrosin 100.0 6.8E-38 2.3E-42 341.5 17.8 247 612-870 51-336 (343)
102 1ob3_A PFPK5, cell division co 100.0 5.5E-38 1.9E-42 333.0 16.6 247 612-863 6-281 (288)
103 3v8s_A RHO-associated protein 100.0 1.6E-38 5.3E-43 351.2 12.6 244 611-863 72-330 (410)
104 1xjd_A Protein kinase C, theta 100.0 2.3E-38 7.8E-43 342.7 13.5 238 612-862 21-269 (345)
105 3gxj_A TGF-beta receptor type- 100.0 4.8E-39 1.6E-43 344.1 8.0 252 612-870 7-298 (303)
106 2izr_A Casein kinase I isoform 100.0 3.6E-38 1.2E-42 341.4 14.8 248 612-867 13-279 (330)
107 2a2a_A Death-associated protei 100.0 8.1E-38 2.8E-42 337.2 17.4 251 602-863 8-273 (321)
108 1fot_A TPK1 delta, CAMP-depend 100.0 8.4E-38 2.9E-42 335.0 17.3 238 612-863 10-259 (318)
109 3ttj_A Mitogen-activated prote 100.0 1.5E-37 5.2E-42 350.5 20.2 252 606-863 62-356 (464)
110 2zv2_A Calcium/calmodulin-depe 100.0 4.7E-38 1.6E-42 335.4 14.9 241 612-863 17-293 (298)
111 4f0f_A Serine/threonine-protei 100.0 2E-37 6.9E-42 328.6 19.6 244 612-867 23-287 (287)
112 3o0g_A Cell division protein k 100.0 1.7E-37 5.8E-42 330.0 19.1 249 611-863 5-283 (292)
113 2y94_A 5'-AMP-activated protei 100.0 9.4E-38 3.2E-42 351.2 18.0 239 612-863 20-267 (476)
114 2eva_A TAK1 kinase - TAB1 chim 100.0 1.2E-37 4E-42 333.4 17.8 245 612-868 12-262 (307)
115 3a8x_A Protein kinase C IOTA t 100.0 1E-37 3.6E-42 338.3 17.6 245 612-863 13-276 (345)
116 3poz_A Epidermal growth factor 100.0 6.2E-38 2.1E-42 338.8 15.7 246 610-868 17-277 (327)
117 3kmu_A ILK, integrin-linked ki 100.0 5.9E-38 2E-42 329.8 14.9 243 612-869 14-270 (271)
118 1nxk_A MAP kinase-activated pr 100.0 6.5E-38 2.2E-42 347.3 15.8 242 614-864 68-323 (400)
119 3hko_A Calcium/calmodulin-depe 100.0 8.2E-38 2.8E-42 341.2 16.3 253 600-863 20-331 (345)
120 3c1x_A Hepatocyte growth facto 100.0 6.7E-38 2.3E-42 343.5 15.3 246 611-867 92-353 (373)
121 3dls_A PAS domain-containing s 100.0 1.1E-37 3.8E-42 337.3 16.6 240 603-863 21-275 (335)
122 1rjb_A FL cytokine receptor; k 100.0 1.5E-37 5.2E-42 338.8 17.8 247 612-869 49-334 (344)
123 2qr7_A Ribosomal protein S6 ki 100.0 6.9E-38 2.4E-42 339.3 14.8 249 604-863 20-278 (342)
124 3is5_A Calcium-dependent prote 100.0 3E-37 1E-41 326.7 19.3 248 603-863 19-279 (285)
125 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.3E-37 4.4E-42 338.1 16.8 238 612-863 45-294 (350)
126 3p1a_A MYT1 kinase, membrane-a 100.0 9.7E-38 3.3E-42 334.7 15.4 240 606-863 57-305 (311)
127 4fvq_A Tyrosine-protein kinase 100.0 4.8E-38 1.7E-42 333.9 12.9 243 612-869 12-275 (289)
128 1qpc_A LCK kinase; alpha beta 100.0 1.4E-37 4.8E-42 328.4 16.3 243 612-867 17-267 (279)
129 1jl5_A Outer protein YOPM; leu 100.0 7.3E-37 2.5E-41 343.9 23.1 406 35-515 5-415 (454)
130 3kfa_A Tyrosine-protein kinase 100.0 1.8E-37 6.1E-42 329.3 17.0 244 612-867 17-269 (288)
131 3cok_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 328.0 16.2 243 606-863 11-263 (278)
132 3fdn_A Serine/threonine-protei 100.0 1.8E-37 6.1E-42 327.6 16.8 240 612-864 13-259 (279)
133 1mp8_A Focal adhesion kinase 1 100.0 1.8E-37 6.3E-42 327.8 16.6 244 612-868 19-275 (281)
134 3kex_A Receptor tyrosine-prote 100.0 1.5E-37 5E-42 335.7 16.2 246 611-869 16-276 (325)
135 1t46_A HOMO sapiens V-KIT hard 100.0 2.1E-37 7.2E-42 333.0 17.2 245 612-867 27-305 (313)
136 1csn_A Casein kinase-1; phosph 100.0 1E-37 3.4E-42 333.0 14.6 248 612-867 14-281 (298)
137 3a62_A Ribosomal protein S6 ki 100.0 1.2E-37 4E-42 336.3 15.2 242 607-863 18-277 (327)
138 2wqm_A Serine/threonine-protei 100.0 2.5E-37 8.4E-42 331.9 17.6 253 606-869 32-297 (310)
139 2h8h_A Proto-oncogene tyrosine 100.0 8.7E-38 3E-42 359.4 14.5 245 612-869 271-523 (535)
140 3qup_A Tyrosine-protein kinase 100.0 1.9E-37 6.5E-42 334.9 16.2 245 612-868 27-297 (323)
141 4aw2_A Serine/threonine-protei 100.0 7E-38 2.4E-42 348.7 13.1 243 612-863 78-339 (437)
142 2pvf_A Fibroblast growth facto 100.0 2.9E-37 1E-41 334.8 17.5 244 612-867 39-316 (334)
143 3q60_A ROP5B; pseudokinase, tr 100.0 7.8E-38 2.7E-42 344.4 13.2 246 610-862 64-352 (371)
144 3g33_A Cell division protein k 100.0 2.6E-37 8.9E-42 331.3 16.8 252 606-863 9-297 (308)
145 2i0e_A Protein kinase C-beta I 100.0 1.8E-37 6E-42 336.9 15.6 239 612-863 24-277 (353)
146 3bz5_A Internalin-J, INLJ; leu 100.0 1.8E-35 6E-40 332.9 32.3 232 6-267 32-263 (457)
147 3f3z_A Calcium/calmodulin-depe 100.0 2.1E-37 7.2E-42 326.7 15.6 249 603-863 6-262 (277)
148 1b6c_B TGF-B superfamily recep 100.0 3.8E-37 1.3E-41 335.5 18.1 260 602-870 38-337 (342)
149 3kk8_A Calcium/calmodulin depe 100.0 2.3E-37 7.9E-42 327.7 15.9 247 606-863 6-262 (284)
150 4e5w_A Tyrosine-protein kinase 100.0 1.4E-37 4.9E-42 332.5 14.2 250 612-867 25-300 (302)
151 3mwu_A Calmodulin-domain prote 100.0 5.1E-37 1.7E-41 350.2 19.3 250 602-863 18-277 (486)
152 2y7j_A Phosphorylase B kinase 100.0 3.1E-37 1.1E-41 338.1 16.8 249 604-863 92-360 (365)
153 2acx_A G protein-coupled recep 100.0 3E-37 1E-41 351.1 17.2 243 612-863 188-445 (576)
154 3bz5_A Internalin-J, INLJ; leu 100.0 8.5E-36 2.9E-40 335.5 28.7 366 28-517 28-393 (457)
155 2a19_B Interferon-induced, dou 100.0 1.3E-37 4.6E-42 329.6 13.2 245 604-870 9-275 (284)
156 4eut_A Serine/threonine-protei 100.0 6E-37 2.1E-41 339.9 19.0 255 610-867 11-307 (396)
157 3i6u_A CDS1, serine/threonine- 100.0 2.1E-37 7.2E-42 345.7 15.3 251 602-863 131-400 (419)
158 2vd5_A DMPK protein; serine/th 100.0 1.6E-37 5.6E-42 343.2 14.2 242 612-863 65-328 (412)
159 3og7_A AKAP9-BRAF fusion prote 100.0 1.9E-37 6.6E-42 329.0 14.1 248 612-869 28-288 (289)
160 3bhy_A Death-associated protei 100.0 3.2E-37 1.1E-41 326.5 15.6 247 606-863 5-266 (283)
161 4ejn_A RAC-alpha serine/threon 100.0 1.6E-37 5.6E-42 350.2 14.1 239 612-863 152-405 (446)
162 3lxp_A Non-receptor tyrosine-p 100.0 2.4E-37 8.1E-42 332.9 14.5 252 612-868 35-309 (318)
163 3dbq_A Dual specificity protei 100.0 5.3E-37 1.8E-41 333.8 17.4 240 611-863 12-274 (343)
164 2jam_A Calcium/calmodulin-depe 100.0 3.2E-37 1.1E-41 330.0 15.4 249 604-863 7-262 (304)
165 3gni_B Strad alpha; kinase fol 100.0 6.2E-37 2.1E-41 339.6 18.2 250 611-863 28-334 (389)
166 2zmd_A Dual specificity protei 100.0 6.3E-37 2.1E-41 338.4 18.1 241 610-863 58-321 (390)
167 1u5q_A Serine/threonine protei 100.0 2E-37 6.7E-42 336.9 13.8 242 606-864 54-307 (348)
168 2ac3_A MAP kinase-interacting 100.0 6.3E-37 2.2E-41 329.7 17.6 247 613-863 18-296 (316)
169 3llt_A Serine/threonine kinase 100.0 3.8E-37 1.3E-41 337.9 16.1 193 606-805 35-262 (360)
170 3ork_A Serine/threonine protei 100.0 3.6E-38 1.2E-42 338.3 7.7 251 604-865 10-277 (311)
171 2eue_A Carbon catabolite derep 100.0 3.5E-37 1.2E-41 324.5 15.2 238 612-863 17-263 (275)
172 1p4o_A Insulin-like growth fac 100.0 5.1E-37 1.7E-41 331.4 16.8 248 607-868 26-298 (322)
173 1byg_A CSK, protein (C-termina 100.0 5.5E-37 1.9E-41 323.6 16.4 243 612-869 25-273 (278)
174 3byv_A Rhoptry kinase; malaria 100.0 1.1E-37 3.6E-42 343.9 11.4 232 612-863 77-360 (377)
175 3lij_A Calcium/calmodulin depe 100.0 5.3E-37 1.8E-41 350.6 17.5 248 604-863 35-292 (494)
176 3pls_A Macrophage-stimulating 100.0 4.7E-37 1.6E-41 327.8 16.0 246 611-867 24-285 (298)
177 3f66_A Hepatocyte growth facto 100.0 4.9E-37 1.7E-41 327.6 16.1 248 610-868 27-290 (298)
178 2xrw_A Mitogen-activated prote 100.0 1.6E-36 5.4E-41 333.6 20.6 252 606-863 25-319 (371)
179 2ozo_A Tyrosine-protein kinase 100.0 7E-37 2.4E-41 356.8 18.6 240 615-867 343-596 (613)
180 3oz6_A Mitogen-activated prote 100.0 4.8E-37 1.7E-41 340.2 16.4 255 603-863 6-329 (388)
181 2r5t_A Serine/threonine-protei 100.0 3E-37 1E-41 337.5 14.4 237 607-858 39-285 (373)
182 3lxl_A Tyrosine-protein kinase 100.0 1.3E-37 4.5E-42 336.6 11.3 255 610-869 25-303 (327)
183 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.6E-37 1.9E-41 348.5 16.7 242 612-862 189-448 (543)
184 3eqc_A Dual specificity mitoge 100.0 4.4E-37 1.5E-41 337.2 15.3 249 611-863 36-325 (360)
185 3nyv_A Calmodulin-domain prote 100.0 3.3E-37 1.1E-41 352.0 14.8 248 604-863 24-282 (484)
186 3op5_A Serine/threonine-protei 100.0 2.8E-37 9.6E-42 339.0 13.5 250 607-867 36-327 (364)
187 4agu_A Cyclin-dependent kinase 100.0 4.7E-37 1.6E-41 329.9 14.8 249 612-863 7-285 (311)
188 1fvr_A Tyrosine-protein kinase 100.0 6.3E-37 2.2E-41 331.2 15.8 245 612-868 29-299 (327)
189 1mqb_A Ephrin type-A receptor 100.0 1.1E-36 3.7E-41 329.8 17.6 244 612-867 48-307 (333)
190 3q5i_A Protein kinase; CDPK, m 100.0 5.9E-37 2E-41 351.1 16.2 248 604-863 34-302 (504)
191 1t4h_A Serine/threonine-protei 100.0 1.7E-36 5.8E-41 322.0 18.5 241 612-863 30-283 (290)
192 2vgo_A Serine/threonine-protei 100.0 1.2E-36 4.1E-41 322.1 17.0 239 612-863 18-263 (284)
193 1u59_A Tyrosine-protein kinase 100.0 1.1E-36 3.8E-41 322.8 16.7 243 612-867 13-270 (287)
194 4fl3_A Tyrosine-protein kinase 100.0 5.6E-37 1.9E-41 358.3 15.8 241 614-867 375-629 (635)
195 2xir_A Vascular endothelial gr 100.0 7.6E-37 2.6E-41 329.2 15.6 246 612-868 31-309 (316)
196 3rp9_A Mitogen-activated prote 100.0 1.1E-36 3.7E-41 345.2 17.6 187 606-798 53-280 (458)
197 2h34_A Serine/threonine-protei 100.0 8.2E-37 2.8E-41 327.3 15.7 252 606-869 34-296 (309)
198 3cc6_A Protein tyrosine kinase 100.0 1.5E-36 5.2E-41 320.8 17.3 244 612-868 16-272 (281)
199 4hgt_A Casein kinase I isoform 100.0 6.8E-37 2.3E-41 326.2 14.7 252 606-867 9-278 (296)
200 3brb_A Proto-oncogene tyrosine 100.0 2.1E-36 7.2E-41 325.1 18.5 245 612-868 38-307 (313)
201 2yex_A Serine/threonine-protei 100.0 3E-36 1E-40 317.7 19.2 248 605-864 6-263 (276)
202 3kvw_A DYRK2, dual specificity 100.0 8.3E-37 2.8E-41 341.7 15.7 191 610-805 99-302 (429)
203 2w1i_A JAK2; chromosomal rearr 100.0 5.9E-37 2E-41 331.2 14.0 251 612-868 45-321 (326)
204 2i1m_A Macrophage colony-stimu 100.0 7.3E-37 2.5E-41 331.8 14.8 247 611-868 49-325 (333)
205 2buj_A Serine/threonine-protei 100.0 1.1E-36 3.7E-41 328.1 15.9 251 610-870 31-307 (317)
206 2v62_A Serine/threonine-protei 100.0 5.6E-37 1.9E-41 334.0 13.7 249 611-868 40-327 (345)
207 3lzb_A Epidermal growth factor 100.0 1.1E-36 3.7E-41 328.7 15.9 246 610-868 17-277 (327)
208 3uzp_A CKI-delta, CKID, casein 100.0 9.3E-37 3.2E-41 325.2 14.9 251 607-867 10-278 (296)
209 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3E-36 1E-40 325.9 19.1 252 606-863 34-319 (329)
210 3lm5_A Serine/threonine-protei 100.0 8.6E-37 2.9E-41 329.8 14.6 241 614-863 35-288 (327)
211 1x8b_A WEE1HU, WEE1-like prote 100.0 9.7E-37 3.3E-41 323.8 14.7 242 604-864 9-281 (289)
212 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.8E-36 6.2E-41 332.8 17.4 237 612-867 69-337 (365)
213 1vzo_A Ribosomal protein S6 ki 100.0 4.2E-37 1.4E-41 335.9 12.2 247 607-864 55-323 (355)
214 2yfx_A Tyrosine-protein kinase 100.0 1.1E-36 3.8E-41 329.3 15.5 245 612-868 34-303 (327)
215 3mtl_A Cell division protein k 100.0 2.8E-37 9.5E-42 333.2 10.6 248 612-863 6-282 (324)
216 2w5a_A Serine/threonine-protei 100.0 5.9E-37 2E-41 323.7 12.5 247 612-870 10-275 (279)
217 3nsz_A CK II alpha, casein kin 100.0 1.5E-36 5.2E-41 328.9 15.7 246 612-863 40-320 (330)
218 2vwi_A Serine/threonine-protei 100.0 5.5E-37 1.9E-41 328.1 11.9 248 611-863 18-288 (303)
219 1xbb_A Tyrosine-protein kinase 100.0 1.4E-36 4.9E-41 322.7 14.9 243 612-867 20-277 (291)
220 1cm8_A Phosphorylated MAP kina 100.0 2E-36 7E-41 331.6 16.5 251 606-863 25-308 (367)
221 4aaa_A Cyclin-dependent kinase 100.0 9.6E-37 3.3E-41 330.3 13.7 253 606-863 25-307 (331)
222 2jii_A Serine/threonine-protei 100.0 2E-37 6.8E-42 338.6 8.2 248 611-867 45-334 (352)
223 1phk_A Phosphorylase kinase; g 100.0 2E-36 6.8E-41 323.0 15.6 248 605-863 16-284 (298)
224 3n9x_A Phosphotransferase; mal 100.0 1E-36 3.5E-41 341.8 13.9 194 604-803 24-253 (432)
225 2owb_A Serine/threonine-protei 100.0 1.5E-36 5.2E-41 329.1 14.6 239 612-863 45-292 (335)
226 2rku_A Serine/threonine-protei 100.0 1.8E-36 6E-41 322.6 14.8 239 612-863 19-266 (294)
227 2h6d_A 5'-AMP-activated protei 100.0 2.2E-36 7.5E-41 318.7 15.2 239 612-863 15-262 (276)
228 3a7i_A MST3 kinase, serine/thr 100.0 4E-36 1.4E-40 321.3 17.4 241 612-864 26-272 (303)
229 1ua2_A CAK, cell division prot 100.0 3.7E-36 1.3E-40 327.6 17.4 253 606-864 10-293 (346)
230 2ycf_A Serine/threonine-protei 100.0 1.4E-36 4.6E-41 327.9 13.5 251 602-863 6-275 (322)
231 3uqc_A Probable conserved tran 100.0 2.3E-36 8E-41 318.9 14.9 229 607-869 32-265 (286)
232 3com_A Serine/threonine-protei 100.0 4E-36 1.4E-40 323.2 17.0 241 612-863 33-279 (314)
233 2clq_A Mitogen-activated prote 100.0 3.7E-36 1.3E-40 320.3 16.3 242 612-863 26-279 (295)
234 2pml_X PFPK7, Ser/Thr protein 100.0 1.4E-36 4.9E-41 331.8 13.3 247 612-863 35-323 (348)
235 3mi9_A Cell division protein k 100.0 3.1E-36 1.1E-40 329.3 15.8 251 606-863 17-312 (351)
236 1zy4_A Serine/threonine-protei 100.0 3.9E-36 1.3E-40 321.5 15.8 246 605-863 5-284 (303)
237 3pfq_A PKC-B, PKC-beta, protei 100.0 4.4E-36 1.5E-40 353.1 17.5 240 611-863 344-598 (674)
238 2r3i_A Cell division protein k 100.0 1.7E-35 5.8E-40 315.9 20.1 248 612-863 7-284 (299)
239 2j7t_A Serine/threonine-protei 100.0 2.7E-36 9.3E-41 322.6 13.9 246 606-863 19-276 (302)
240 2wei_A Calmodulin-domain prote 100.0 7.7E-36 2.6E-40 316.3 17.0 249 603-863 19-277 (287)
241 3rgf_A Cyclin-dependent kinase 100.0 1.8E-36 6.3E-41 337.5 12.7 246 613-863 26-334 (405)
242 3fhr_A MAP kinase-activated pr 100.0 2.8E-36 9.6E-41 326.8 13.4 250 604-863 26-288 (336)
243 3fme_A Dual specificity mitoge 100.0 5E-36 1.7E-40 318.5 15.0 242 612-863 11-267 (290)
244 1u46_A ACK-1, activated CDC42 100.0 2.7E-36 9.1E-41 320.8 12.8 248 611-870 21-285 (291)
245 3ll6_A Cyclin G-associated kin 100.0 9.3E-36 3.2E-40 323.8 17.4 243 610-868 30-307 (337)
246 1o6v_A Internalin A; bacterial 100.0 2.6E-34 8.8E-39 326.4 29.6 345 17-417 45-389 (466)
247 1wak_A Serine/threonine-protei 100.0 6.4E-36 2.2E-40 333.1 15.9 248 612-863 41-392 (397)
248 3eb0_A Putative uncharacterize 100.0 3.8E-36 1.3E-40 332.3 13.4 246 611-863 10-322 (383)
249 2fst_X Mitogen-activated prote 100.0 2.9E-36 1E-40 329.9 12.4 251 606-863 29-312 (367)
250 4exu_A Mitogen-activated prote 100.0 5E-36 1.7E-40 329.6 14.2 251 606-863 42-324 (371)
251 3sv0_A Casein kinase I-like; t 100.0 6.6E-36 2.3E-40 336.8 15.2 251 607-867 8-276 (483)
252 4e7w_A Glycogen synthase kinas 100.0 1.1E-35 3.8E-40 329.1 16.6 252 610-867 42-328 (394)
253 2x7f_A TRAF2 and NCK-interacti 100.0 1E-35 3.6E-40 321.7 15.9 244 606-863 24-287 (326)
254 3pg1_A Mitogen-activated prote 100.0 3.4E-36 1.2E-40 330.5 12.2 249 611-863 25-317 (362)
255 2id5_A Lingo-1, leucine rich r 100.0 5.2E-34 1.8E-38 325.5 29.8 323 20-369 13-335 (477)
256 3e3p_A Protein kinase, putativ 100.0 1.1E-35 3.6E-40 326.5 15.2 254 604-863 21-315 (360)
257 2j0j_A Focal adhesion kinase 1 100.0 1.5E-35 5.2E-40 347.5 16.9 243 612-867 394-649 (656)
258 1z57_A Dual specificity protei 100.0 1.1E-35 3.8E-40 323.5 14.6 247 612-863 18-329 (339)
259 3qyz_A Mitogen-activated prote 100.0 1.1E-35 3.7E-40 326.3 14.6 251 607-863 28-314 (364)
260 1j1b_A Glycogen synthase kinas 100.0 2.1E-35 7.1E-40 329.6 17.0 247 610-863 56-337 (420)
261 3coi_A Mitogen-activated prote 100.0 1.5E-35 5.1E-40 324.0 15.4 251 606-863 24-306 (353)
262 2wtk_C Serine/threonine-protei 100.0 2.2E-35 7.4E-40 316.0 16.2 242 606-863 5-264 (305)
263 3an0_A Dual specificity mitoge 100.0 1.1E-35 3.9E-40 323.4 14.1 242 612-863 55-311 (340)
264 2rio_A Serine/threonine-protei 100.0 2.8E-35 9.5E-40 330.1 17.6 241 612-863 19-296 (434)
265 3m2w_A MAP kinase-activated pr 100.0 2.1E-35 7.1E-40 314.9 15.0 232 601-863 12-257 (299)
266 2vx3_A Dual specificity tyrosi 100.0 1.5E-35 5E-40 327.4 14.2 195 606-805 54-261 (382)
267 2b9h_A MAP kinase FUS3, mitoge 100.0 9.8E-36 3.4E-40 325.8 12.6 252 606-863 11-306 (353)
268 2i6l_A Mitogen-activated prote 100.0 2E-35 6.8E-40 318.7 14.7 248 612-863 15-306 (320)
269 1o6v_A Internalin A; bacterial 100.0 1.8E-33 6.3E-38 319.4 31.4 347 39-440 43-389 (466)
270 1blx_A Cyclin-dependent kinase 100.0 3.2E-35 1.1E-39 317.9 16.2 251 607-863 12-297 (326)
271 2id5_A Lingo-1, leucine rich r 100.0 1.1E-33 3.6E-38 322.9 28.8 321 44-391 13-333 (477)
272 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.8E-35 6.2E-40 318.8 13.4 246 611-870 36-303 (319)
273 3aln_A Dual specificity mitoge 100.0 2.8E-35 9.5E-40 318.4 14.5 244 612-863 26-286 (327)
274 3a99_A Proto-oncogene serine/t 100.0 6.8E-36 2.3E-40 321.7 9.7 233 612-863 47-294 (320)
275 3cek_A Dual specificity protei 100.0 7.3E-35 2.5E-39 313.0 17.3 240 611-863 31-293 (313)
276 3p23_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39 328.4 13.4 241 610-863 26-284 (432)
277 1q8y_A SR protein kinase; tran 100.0 3.4E-35 1.1E-39 324.2 13.4 250 610-863 21-334 (373)
278 3qa8_A MGC80376 protein; kinas 100.0 4.1E-35 1.4E-39 336.3 14.2 250 606-860 14-295 (676)
279 2dyl_A Dual specificity mitoge 100.0 8.8E-35 3E-39 313.3 15.3 242 612-863 29-284 (318)
280 2iwi_A Serine/threonine-protei 100.0 1.5E-35 5.2E-40 318.2 8.5 237 606-863 31-284 (312)
281 2eu9_A Dual specificity protei 100.0 9.5E-35 3.3E-39 318.3 14.7 251 606-863 19-334 (355)
282 3o6n_A APL1; leucine-rich repe 100.0 1.5E-32 5.1E-37 304.6 25.9 309 41-367 44-352 (390)
283 2pzi_A Probable serine/threoni 100.0 6.5E-34 2.2E-38 337.5 15.3 236 606-866 80-325 (681)
284 3oja_B Anopheles plasmodium-re 100.0 3.9E-32 1.3E-36 317.9 26.3 307 41-389 50-356 (597)
285 3o6n_A APL1; leucine-rich repe 100.0 6.6E-32 2.2E-36 299.4 25.5 310 64-416 43-352 (390)
286 3dzo_A Rhoptry kinase domain; 100.0 2.8E-33 9.7E-38 311.6 12.2 231 612-862 82-363 (413)
287 3oja_B Anopheles plasmodium-re 100.0 1.5E-31 5.1E-36 313.0 25.5 310 17-368 50-359 (597)
288 1ogq_A PGIP-2, polygalacturona 100.0 1.8E-32 6E-37 293.5 15.0 250 42-294 50-303 (313)
289 4fmz_A Internalin; leucine ric 100.0 3E-31 1E-35 289.4 24.8 305 38-389 40-344 (347)
290 4fmz_A Internalin; leucine ric 100.0 5.3E-31 1.8E-35 287.4 26.2 304 17-367 43-346 (347)
291 1ogq_A PGIP-2, polygalacturona 100.0 5.9E-32 2E-36 289.4 16.5 249 18-269 50-302 (313)
292 2vuw_A Serine/threonine-protei 100.0 2E-33 6.9E-38 304.9 1.4 241 606-863 20-332 (336)
293 1xku_A Decorin; proteoglycan, 100.0 1.5E-29 5.2E-34 273.6 28.9 250 19-278 32-283 (330)
294 1xku_A Decorin; proteoglycan, 100.0 3.1E-29 1.1E-33 271.1 29.5 296 41-364 30-329 (330)
295 2ft3_A Biglycan; proteoglycan, 100.0 9.9E-30 3.4E-34 275.2 25.0 288 19-317 34-331 (332)
296 2ft3_A Biglycan; proteoglycan, 100.0 1.9E-29 6.4E-34 273.0 26.5 295 42-365 33-331 (332)
297 1z7x_W Ribonuclease inhibitor; 100.0 6.5E-33 2.2E-37 315.2 -14.2 353 17-389 2-409 (461)
298 2z80_A TOLL-like receptor 2, v 100.0 3E-28 1E-32 266.0 17.6 276 18-297 31-316 (353)
299 4fcg_A Uncharacterized protein 100.0 1.1E-27 3.8E-32 257.7 20.0 225 17-270 80-313 (328)
300 1z7x_W Ribonuclease inhibitor; 100.0 9.8E-32 3.4E-36 305.5 -12.6 356 42-417 3-412 (461)
301 2z66_A Variable lymphocyte rec 100.0 8.5E-28 2.9E-32 256.9 18.7 279 21-303 10-295 (306)
302 2z80_A TOLL-like receptor 2, v 100.0 4.3E-28 1.5E-32 264.7 15.6 259 17-275 51-318 (353)
303 2z66_A Variable lymphocyte rec 100.0 3.8E-27 1.3E-31 251.8 22.0 262 18-280 28-296 (306)
304 3zyi_A Leucine-rich repeat-con 99.9 1.1E-26 3.7E-31 262.5 26.3 246 21-295 57-303 (452)
305 3zyj_A Leucine-rich repeat-con 99.9 1.6E-26 5.6E-31 260.1 26.5 248 20-295 45-292 (440)
306 4fcg_A Uncharacterized protein 99.9 4.5E-27 1.5E-31 253.0 20.4 236 40-295 79-314 (328)
307 3zyi_A Leucine-rich repeat-con 99.9 1.2E-26 4.1E-31 262.1 24.2 229 17-271 74-303 (452)
308 1ozn_A Reticulon 4 receptor; N 99.9 6.9E-27 2.3E-31 247.0 20.2 255 20-278 13-268 (285)
309 3zyj_A Leucine-rich repeat-con 99.9 1.9E-26 6.6E-31 259.5 24.4 229 17-271 63-292 (440)
310 4azs_A Methyltransferase WBDD; 99.9 8.8E-29 3E-33 284.6 4.8 181 616-801 242-437 (569)
311 1ozn_A Reticulon 4 receptor; N 99.9 8.9E-27 3E-31 246.2 16.9 239 17-256 31-270 (285)
312 3o53_A Protein LRIM1, AGAP0063 99.9 9.2E-28 3.2E-32 257.6 5.5 258 19-290 11-270 (317)
313 1wwl_A Monocyte differentiatio 99.9 1.5E-27 5E-32 255.4 4.2 249 38-296 39-310 (312)
314 1wwl_A Monocyte differentiatio 99.9 1.7E-27 5.7E-32 255.0 3.7 245 18-272 43-310 (312)
315 3ogk_B Coronatine-insensitive 99.9 4.5E-29 1.6E-33 293.1 -9.2 328 35-387 66-445 (592)
316 3o53_A Protein LRIM1, AGAP0063 99.9 2E-26 6.8E-31 247.2 10.0 246 17-276 33-281 (317)
317 3ogk_B Coronatine-insensitive 99.9 1.6E-28 5.6E-33 288.3 -10.1 400 17-418 72-528 (592)
318 3oja_A Leucine-rich immune mol 99.9 1.1E-25 3.7E-30 255.5 12.2 233 19-289 35-269 (487)
319 3oja_A Leucine-rich immune mol 99.9 5.5E-26 1.9E-30 258.0 9.0 235 42-314 34-270 (487)
320 2z62_A TOLL-like receptor 4, v 99.9 6.5E-24 2.2E-28 223.0 21.5 222 22-247 11-237 (276)
321 3g06_A SSPH2 (leucine-rich rep 99.9 2.9E-23 1E-27 240.0 28.7 268 19-378 41-308 (622)
322 3g06_A SSPH2 (leucine-rich rep 99.9 3.1E-23 1.1E-27 239.8 28.2 256 43-390 41-296 (622)
323 2z62_A TOLL-like receptor 4, v 99.9 6.4E-24 2.2E-28 223.1 20.2 208 17-225 27-239 (276)
324 2o6q_A Variable lymphocyte rec 99.9 9.8E-23 3.4E-27 213.0 24.0 203 19-248 17-219 (270)
325 2o6q_A Variable lymphocyte rec 99.9 1.7E-22 5.8E-27 211.2 23.7 203 43-272 17-219 (270)
326 3en9_A Glycoprotease, O-sialog 99.9 2.7E-24 9.2E-29 245.9 9.0 178 612-801 340-537 (540)
327 3rfs_A Internalin B, repeat mo 99.9 1.1E-23 3.8E-28 220.4 13.0 228 19-283 20-247 (272)
328 3rfs_A Internalin B, repeat mo 99.9 6.4E-23 2.2E-27 214.6 17.3 226 44-306 21-246 (272)
329 1p9a_G Platelet glycoprotein I 99.9 9E-22 3.1E-26 207.5 22.4 200 17-247 9-208 (290)
330 1p9a_G Platelet glycoprotein I 99.9 9.4E-22 3.2E-26 207.3 22.2 177 17-197 30-206 (290)
331 2xwt_C Thyrotropin receptor; s 99.9 5.5E-22 1.9E-26 203.3 16.1 196 43-244 32-236 (239)
332 2p1m_B Transport inhibitor res 99.9 5.2E-26 1.8E-30 267.2 -16.7 431 37-510 61-543 (594)
333 2xwt_C Thyrotropin receptor; s 99.9 1.1E-21 3.7E-26 201.1 16.8 196 67-268 32-236 (239)
334 2p1m_B Transport inhibitor res 99.9 3.5E-25 1.2E-29 260.1 -12.3 395 17-415 65-518 (594)
335 2ast_B S-phase kinase-associat 99.9 3.8E-23 1.3E-27 224.1 4.2 221 20-244 49-282 (336)
336 3goz_A Leucine-rich repeat-con 99.9 3.7E-23 1.3E-27 226.1 4.0 256 22-297 2-299 (362)
337 4glp_A Monocyte differentiatio 99.9 6.3E-22 2.2E-26 211.4 11.7 226 41-272 63-308 (310)
338 4glp_A Monocyte differentiatio 99.9 9.5E-22 3.3E-26 210.0 12.6 225 18-248 64-308 (310)
339 3goz_A Leucine-rich repeat-con 99.9 7.9E-23 2.7E-27 223.5 4.0 258 46-323 2-301 (362)
340 3m19_A Variable lymphocyte rec 99.9 1.4E-20 4.6E-25 194.4 20.6 179 19-224 15-193 (251)
341 2ca6_A RAN GTPase-activating p 99.9 4E-23 1.4E-27 228.3 0.5 237 35-271 25-316 (386)
342 1zar_A RIO2 kinase; serine kin 99.9 3.6E-22 1.2E-26 209.0 7.0 130 611-753 93-241 (282)
343 3m19_A Variable lymphocyte rec 99.8 2.5E-20 8.4E-25 192.5 20.0 180 43-249 15-194 (251)
344 2ca6_A RAN GTPase-activating p 99.8 7.6E-23 2.6E-27 226.0 1.1 242 8-251 24-320 (386)
345 2ast_B S-phase kinase-associat 99.8 1.2E-22 4.3E-27 220.0 2.5 253 42-302 47-313 (336)
346 1h6u_A Internalin H; cell adhe 99.8 1.1E-20 3.6E-25 201.3 16.4 209 21-247 22-230 (308)
347 1h6u_A Internalin H; cell adhe 99.8 1.2E-20 4.1E-25 200.9 16.3 192 17-224 40-231 (308)
348 4ay9_X Follicle-stimulating ho 99.8 7E-20 2.4E-24 199.0 19.4 240 21-291 12-255 (350)
349 4ay9_X Follicle-stimulating ho 99.8 1.2E-19 4E-24 197.2 18.0 221 91-316 31-256 (350)
350 2o6s_A Variable lymphocyte rec 99.8 1.9E-19 6.7E-24 180.0 14.6 181 21-211 10-190 (208)
351 2o6s_A Variable lymphocyte rec 99.8 3.7E-19 1.3E-23 177.9 16.2 162 18-186 28-189 (208)
352 3cvr_A Invasion plasmid antige 99.8 1.2E-18 4E-23 199.0 17.5 188 43-258 60-254 (571)
353 3cvr_A Invasion plasmid antige 99.8 2.2E-18 7.5E-23 196.7 17.1 193 61-281 49-253 (571)
354 2v9t_B SLIT homolog 2 protein 99.8 8.7E-18 3E-22 169.2 16.8 152 21-199 14-165 (220)
355 1zth_A RIO1 serine protein kin 99.8 7.6E-19 2.6E-23 181.6 8.8 135 610-754 49-219 (258)
356 2xot_A Amphoterin-induced prot 99.8 3.7E-18 1.3E-22 186.2 14.5 177 20-223 20-202 (361)
357 1m9s_A Internalin B; cell inva 99.8 2.4E-18 8.2E-23 198.8 13.1 189 19-223 22-210 (605)
358 1h6t_A Internalin B; cell adhe 99.7 4.8E-18 1.6E-22 179.1 13.7 189 20-224 26-214 (291)
359 1h6t_A Internalin B; cell adhe 99.7 4.7E-18 1.6E-22 179.1 13.3 188 45-248 27-214 (291)
360 2v70_A SLIT-2, SLIT homolog 2 99.7 1.5E-17 5.1E-22 167.4 16.2 153 21-200 14-167 (220)
361 2v9t_B SLIT homolog 2 protein 99.7 2.6E-17 9.1E-22 165.6 17.1 153 45-224 14-166 (220)
362 2xot_A Amphoterin-induced prot 99.7 1.1E-17 3.7E-22 182.5 14.8 176 45-247 21-202 (361)
363 1m9s_A Internalin B; cell inva 99.7 1.1E-17 3.7E-22 193.3 15.6 193 41-249 20-212 (605)
364 2v70_A SLIT-2, SLIT homolog 2 99.7 3.3E-17 1.1E-21 164.9 16.4 154 45-225 14-168 (220)
365 3e6j_A Variable lymphocyte rec 99.7 7.3E-17 2.5E-21 163.6 17.3 154 20-201 21-174 (229)
366 3e6j_A Variable lymphocyte rec 99.7 1.4E-16 4.9E-21 161.4 17.5 153 45-225 22-174 (229)
367 4ezg_A Putative uncharacterize 99.7 3.5E-17 1.2E-21 161.9 11.2 154 39-223 41-194 (197)
368 1xeu_A Internalin C; cellular 99.7 1.9E-17 6.5E-22 171.6 7.4 167 18-199 19-185 (263)
369 4ezg_A Putative uncharacterize 99.7 8.7E-17 3E-21 159.0 11.7 150 17-174 43-193 (197)
370 1dce_A Protein (RAB geranylger 99.7 1.1E-19 3.9E-24 208.7 -10.9 204 63-289 346-567 (567)
371 1xeu_A Internalin C; cellular 99.7 9.8E-18 3.4E-22 173.8 4.6 171 40-249 17-187 (263)
372 4b8c_D Glucose-repressible alc 99.7 9.8E-18 3.3E-22 198.9 3.1 155 18-182 173-336 (727)
373 1dce_A Protein (RAB geranylger 99.7 2.6E-19 8.8E-24 205.7 -10.2 189 87-298 346-549 (567)
374 3sb4_A Hypothetical leucine ri 99.7 3.4E-17 1.1E-21 176.2 6.7 262 17-289 24-328 (329)
375 1w8a_A SLIT protein; signaling 99.6 1.2E-15 4.2E-20 149.9 14.4 130 21-153 11-141 (192)
376 4b8c_D Glucose-repressible alc 99.6 6.1E-17 2.1E-21 192.0 4.2 168 19-196 192-369 (727)
377 4gyi_A RIO2 kinase; protein ki 99.6 5.1E-17 1.7E-21 173.4 2.6 134 610-752 97-263 (397)
378 2ell_A Acidic leucine-rich nuc 99.6 1.3E-15 4.3E-20 146.4 9.8 111 17-129 23-135 (168)
379 4fdw_A Leucine rich hypothetic 99.6 1E-13 3.4E-18 152.2 25.4 265 17-294 112-382 (401)
380 1w8a_A SLIT protein; signaling 99.6 6.7E-15 2.3E-19 144.6 13.7 130 45-201 11-141 (192)
381 2je0_A Acidic leucine-rich nuc 99.6 1.1E-15 3.7E-20 143.7 7.7 127 17-145 16-147 (149)
382 2ell_A Acidic leucine-rich nuc 99.6 3.3E-15 1.1E-19 143.5 10.9 134 40-175 22-160 (168)
383 2wfh_A SLIT homolog 2 protein 99.6 1.4E-14 4.6E-19 142.3 14.8 128 20-151 12-139 (193)
384 3sb4_A Hypothetical leucine ri 99.6 2E-15 6.9E-20 162.3 9.6 240 17-265 48-328 (329)
385 4fdw_A Leucine rich hypothetic 99.6 1.2E-13 4E-18 151.6 23.9 243 18-271 135-383 (401)
386 2o6r_A Variable lymphocyte rec 99.6 2.5E-14 8.4E-19 138.7 14.6 131 20-153 9-139 (177)
387 2je0_A Acidic leucine-rich nuc 99.5 4.5E-15 1.6E-19 139.4 7.4 110 41-152 16-127 (149)
388 2wfh_A SLIT homolog 2 protein 99.5 6.7E-14 2.3E-18 137.3 14.3 127 45-199 13-139 (193)
389 2o6r_A Variable lymphocyte rec 99.5 1.3E-13 4.3E-18 133.6 14.1 128 44-174 9-136 (177)
390 1a9n_A U2A', U2A'; complex (nu 99.5 9.3E-14 3.2E-18 134.4 9.1 86 38-126 15-100 (176)
391 1a9n_A U2A', U2A'; complex (nu 99.4 1E-13 3.5E-18 134.1 8.4 126 17-148 18-150 (176)
392 3g39_A Variable lymphocyte rec 99.4 6.1E-13 2.1E-17 127.5 12.6 106 20-128 11-116 (170)
393 2r9u_A Variable lymphocyte rec 99.4 1E-12 3.4E-17 126.5 12.5 105 20-127 14-118 (174)
394 4fs7_A Uncharacterized protein 99.4 1.7E-11 5.7E-16 135.2 22.7 316 32-388 61-376 (394)
395 1ds9_A Outer arm dynein; leuci 99.4 1.8E-15 6.1E-20 149.7 -8.6 130 17-151 17-153 (198)
396 1ds9_A Outer arm dynein; leuci 99.4 3.6E-15 1.2E-19 147.5 -9.3 155 38-223 14-185 (198)
397 3g39_A Variable lymphocyte rec 99.4 4.1E-12 1.4E-16 121.7 12.4 106 44-152 11-116 (170)
398 4fs7_A Uncharacterized protein 99.3 7.7E-11 2.6E-15 129.8 24.2 323 17-382 70-392 (394)
399 2r9u_A Variable lymphocyte rec 99.3 7.4E-12 2.5E-16 120.4 12.5 105 44-151 14-118 (174)
400 2ifg_A High affinity nerve gro 99.2 5.5E-11 1.9E-15 128.7 11.5 103 22-127 12-116 (347)
401 3tm0_A Aminoglycoside 3'-phosp 99.1 8.8E-11 3E-15 121.6 10.4 137 612-752 18-212 (263)
402 3un9_A NLR family member X1; l 99.1 7.5E-13 2.6E-17 143.8 -6.1 187 17-223 71-283 (372)
403 3un9_A NLR family member X1; l 99.1 1.3E-12 4.3E-17 142.0 -6.6 111 137-247 154-283 (372)
404 1nd4_A Aminoglycoside 3'-phosp 99.1 2E-10 6.7E-15 118.9 10.1 128 617-752 29-213 (264)
405 2ifg_A High affinity nerve gro 99.1 2.9E-10 9.8E-15 123.0 11.5 102 46-150 12-115 (347)
406 4gt6_A Cell surface protein; l 99.1 1.9E-08 6.5E-13 110.6 26.3 131 226-387 257-387 (394)
407 4gt6_A Cell surface protein; l 99.0 1.6E-08 5.5E-13 111.2 23.6 310 19-366 65-390 (394)
408 3dxp_A Putative acyl-COA dehyd 99.0 9.3E-10 3.2E-14 119.5 11.2 140 612-752 42-247 (359)
409 3sg8_A APH(2'')-ID; antibiotic 98.8 5.9E-09 2E-13 110.2 6.2 186 612-802 24-287 (304)
410 4h09_A Hypothetical leucine ri 98.7 1.5E-06 5.2E-11 94.8 25.4 253 18-294 46-298 (379)
411 2ra8_A Uncharacterized protein 98.6 9.3E-09 3.2E-13 110.4 2.5 63 185-247 251-320 (362)
412 4h09_A Hypothetical leucine ri 98.6 5.3E-06 1.8E-10 90.4 24.4 263 17-291 68-342 (379)
413 2ra8_A Uncharacterized protein 98.6 1.1E-08 3.9E-13 109.7 2.5 84 160-245 250-341 (362)
414 3r70_A Aminoglycoside phosphot 98.4 4.7E-07 1.6E-11 96.2 10.1 134 611-753 40-237 (320)
415 3rw6_A Nuclear RNA export fact 98.3 1.2E-07 3.9E-12 96.4 0.8 80 63-144 167-257 (267)
416 3tdw_A Gentamicin resistance p 98.3 2.9E-06 1E-10 89.3 11.6 137 612-753 23-224 (306)
417 3d1u_A Putative fructosamine-3 98.3 1.6E-06 5.5E-11 90.1 9.0 75 612-690 19-97 (288)
418 1io0_A Tropomodulin; LRR prote 98.2 1.9E-07 6.3E-12 90.4 1.1 114 37-150 31-163 (185)
419 1io0_A Tropomodulin; LRR prote 98.1 3.7E-07 1.3E-11 88.2 0.6 87 40-126 63-163 (185)
420 3rw6_A Nuclear RNA export fact 98.1 1.6E-06 5.5E-11 88.0 5.3 97 23-121 148-258 (267)
421 4gkh_A Aminoglycoside 3'-phosp 98.1 1.3E-05 4.4E-10 82.8 11.5 134 615-752 31-222 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 97.9 1.3E-05 4.5E-10 86.2 8.3 74 613-691 46-122 (362)
423 3ats_A Putative uncharacterize 97.9 9.9E-06 3.4E-10 87.5 6.3 79 613-691 25-121 (357)
424 3jr1_A Putative fructosamine-3 97.7 0.00018 6E-09 75.3 11.0 134 612-749 40-232 (312)
425 2olc_A MTR kinase, methylthior 97.6 8E-05 2.7E-09 81.6 8.2 75 612-688 34-120 (397)
426 3e4g_A ATP synthase subunit S, 97.6 1.5E-05 5.3E-10 74.7 1.8 85 41-125 60-150 (176)
427 3e4g_A ATP synthase subunit S, 97.6 2.4E-05 8.2E-10 73.4 2.4 93 7-101 52-150 (176)
428 2q83_A YTAA protein; 2635576, 97.5 0.00026 9.1E-09 75.6 10.1 135 614-752 38-251 (346)
429 2pyw_A Uncharacterized protein 97.2 0.00072 2.5E-08 74.5 9.8 73 612-687 38-122 (420)
430 3f7w_A Putative fructosamine-3 97.2 0.00047 1.6E-08 71.6 7.1 75 612-690 19-97 (288)
431 1zyl_A Hypothetical protein YI 96.9 0.0011 3.9E-08 70.1 6.7 74 615-689 33-113 (328)
432 3csv_A Aminoglycoside phosphot 96.9 0.0045 1.5E-07 65.6 11.3 135 614-752 24-216 (333)
433 3rfe_A Platelet glycoprotein I 96.7 0.0013 4.5E-08 58.7 4.3 68 453-522 11-79 (130)
434 1pgv_A TMD-1, tropomodulin TMD 96.5 0.00068 2.3E-08 64.8 1.7 111 39-149 38-168 (197)
435 3rfe_A Platelet glycoprotein I 96.5 0.0049 1.7E-07 54.9 6.9 55 22-78 12-67 (130)
436 3feg_A Choline/ethanolamine ki 96.4 0.0075 2.6E-07 64.6 8.9 136 613-752 55-253 (379)
437 2ppq_A HSK, HK, homoserine kin 96.4 0.0024 8.1E-08 67.4 4.8 138 613-752 27-216 (322)
438 3dxq_A Choline/ethanolamine ki 96.3 0.0019 6.7E-08 67.4 3.9 71 613-690 23-95 (301)
439 1pgv_A TMD-1, tropomodulin TMD 96.2 0.0014 4.8E-08 62.6 1.7 85 63-147 38-135 (197)
440 1nw1_A Choline kinase (49.2 KD 96.1 0.0071 2.4E-07 66.4 6.9 73 613-690 78-159 (429)
441 3c5i_A Choline kinase; choline 95.9 0.0098 3.3E-07 64.0 6.9 74 613-690 38-121 (369)
442 2qg7_A Ethanolamine kinase PV0 95.6 0.015 5.1E-07 64.1 7.0 74 613-690 113-188 (458)
443 3i1a_A Spectinomycin phosphotr 95.1 0.067 2.3E-06 56.6 10.0 30 723-752 206-235 (339)
444 3f2s_A CK, chetk-alpha, cholin 92.7 0.12 4E-06 55.6 5.9 30 723-752 244-279 (401)
445 3mes_A Choline kinase; malaria 92.4 0.16 5.5E-06 55.1 6.6 74 613-690 75-157 (424)
446 2yle_A Protein spire homolog 1 85.7 4.8 0.00016 38.6 10.3 100 689-802 34-136 (229)
447 4ann_A ESSB; membrane protein, 81.8 2.4 8.3E-05 40.5 6.5 84 661-751 43-126 (215)
448 4ano_A ESSB; membrane protein, 80.4 3.7 0.00013 39.4 7.3 83 661-751 48-131 (219)
449 3cxl_A N-chimerin; SH2, RHO-GA 79.0 0.28 9.4E-06 54.1 -1.3 60 612-674 146-215 (463)
450 3g15_A CK, chetk-alpha, cholin 72.3 6.1 0.00021 42.4 7.2 28 725-752 246-279 (401)
451 2lz0_A Uncharacterized protein 44.9 42 0.0014 27.5 6.0 41 57-98 11-51 (100)
452 2lz0_A Uncharacterized protein 38.4 63 0.0022 26.4 6.1 49 27-76 5-53 (100)
453 2ks1_B Epidermal growth factor 37.0 15 0.00052 24.9 1.6 8 563-570 21-28 (44)
454 2jwa_A Receptor tyrosine-prote 33.6 9.5 0.00032 25.8 0.1 7 577-583 33-39 (44)
455 1cja_A Protein (actin-fragmin 31.3 2.8E+02 0.0095 28.3 10.5 75 677-753 156-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.5e-65 Score=618.67 Aligned_cols=525 Identities=33% Similarity=0.499 Sum_probs=392.2
Q ss_pred CCCCcEEECCCCCCcccCCccc-cCCCCCCEEECcCCcCcccCCcc---ccCCCCCcEEECcCCcCccccCccccCCCCC
Q 002875 17 FNELVDLNLSHNSFSGQFPVEI-FNLTSLISLDISRNNFSGHFPGG---IQSLRNLLVLDAFSNSFSGSVPAEISQLEHL 92 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~Ls~N~i~~~~~~~---~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L 92 (872)
++.|++|+|++|.+.+..|..+ .++++|++|+|++|.+.+..|.. +.++++|++|++++|.+.+..| +..+++|
T Consensus 125 l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L 202 (768)
T 3rgz_A 125 CSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNL 202 (768)
T ss_dssp CTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTC
T ss_pred CCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcC
Confidence 4445555555554444444433 44455555555555544444433 4444444444444444443322 2567777
Q ss_pred CEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecC
Q 002875 93 KVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGA 172 (872)
Q Consensus 93 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n 172 (872)
++|+|++|.+.+..|. |+++++|++|++++|.+++.+|..++.+++|++|++++|.+.+.+|.. .+++|++|++++|
T Consensus 203 ~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n 279 (768)
T 3rgz_A 203 EFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAEN 279 (768)
T ss_dssp CEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSS
T ss_pred CEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCC
Confidence 7777777777766665 777777888888777777777777777777777777777766655543 5556666666666
Q ss_pred CCcccCCccCcCC-CCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCcc-ccCCCCCCEEEcccccCCCCC
Q 002875 173 NLSGSIPKELSNL-TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES-FADLKNLRLLSLMYNEMSGTV 250 (872)
Q Consensus 173 ~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~ 250 (872)
.+.+.+|..+..+ ++|++|++++|.+.+..|..|..+++|++|++++|++++.+|.. +..+++|++|++++|++.+.+
T Consensus 280 ~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~ 359 (768)
T 3rgz_A 280 KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGEL 359 (768)
T ss_dssp EEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECC
T ss_pred ccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccc
Confidence 6665555555443 56666666666665555555555566666666665555444433 555555555555555554444
Q ss_pred Cc-------------------------cccC--CCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCC
Q 002875 251 PE-------------------------SLVQ--LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDIC 303 (872)
Q Consensus 251 p~-------------------------~l~~--l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~ 303 (872)
|. .+.. +++|++|++++|.+++.+|..+..+++|+.|++++|.+.+.+|..+.
T Consensus 360 p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 439 (768)
T 3rgz_A 360 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG 439 (768)
T ss_dssp CTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG
T ss_pred cHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHh
Confidence 44 3333 55677777777777777777788888888888888888888888888
Q ss_pred CCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccc
Q 002875 304 SGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYF 383 (872)
Q Consensus 304 ~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 383 (872)
.+..|+.|.+.+|.+.+.+|..+..+++|+.|++++|++++.+|..+..+++|++|++++|++.+.+|..+..+++|++|
T Consensus 440 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 519 (768)
T 3rgz_A 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 519 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred cCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEE
Confidence 88888888888888888888888888889999999999888888888889999999999999998889888889999999
Q ss_pred cccCCCCCCCcCCcccCCCcccccccccccccCCCCCC------------------------------------------
Q 002875 384 NVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPP------------------------------------------ 421 (872)
Q Consensus 384 ~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~------------------------------------------ 421 (872)
++++| .+.+.+|..+..+++|+.|++++|.+++.+|.
T Consensus 520 ~L~~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (768)
T 3rgz_A 520 KLSNN-SFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQG 598 (768)
T ss_dssp ECCSS-CCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTT
T ss_pred ECCCC-cccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccccccccc
Confidence 99998 45567888888899999999999988765552
Q ss_pred -----------------------------CCcCCccceeeccccccCCCCCCcccccccCcEEEccCccceeccchhccC
Q 002875 422 -----------------------------FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLAR 472 (872)
Q Consensus 422 -----------------------------~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 472 (872)
+..++.++.++++.|.++|.+|..+.++++|+.|+|++|++++.+|..++.
T Consensus 599 ~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~ 678 (768)
T 3rgz_A 599 IRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGD 678 (768)
T ss_dssp CCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGG
T ss_pred ccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhC
Confidence 233567889999999999999999999999999999999999999999999
Q ss_pred CCCCCEEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCCccccccCCccccCCCCCCCCCCCCCCCCcc
Q 002875 473 LPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAPLQPCHASVA 547 (872)
Q Consensus 473 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~np~~c~~~l~~~~~~~~ 547 (872)
++.|++|||++|+++|.+|..+..+++|++|++++|+++|.+|....+..+...+|.|||.+||.|+.+|....+
T Consensus 679 L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~~~ 753 (768)
T 3rgz_A 679 LRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNA 753 (768)
T ss_dssp CTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSCC-
T ss_pred CCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999988876543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1e-59 Score=567.77 Aligned_cols=517 Identities=32% Similarity=0.488 Sum_probs=389.9
Q ss_pred cchhhhcCCCCcEEECCCCCCcccCCc--cccCCCCCCEEECcCCcCcccCCccc-cCCCCCcEEECcCCcCccccCcc-
Q 002875 10 GKPLRIFFNELVDLNLSHNSFSGQFPV--EIFNLTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDAFSNSFSGSVPAE- 85 (872)
Q Consensus 10 ~~~~~~~~~~L~~L~L~~n~i~~~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~-~~l~~L~~LdL~~n~l~~~~p~~- 85 (872)
..+.+ +++|++|+|++|.+++.+|. .+.++++|++|+|++|.+.+..|..+ ..+++|++||+++|.+++..|..
T Consensus 94 ~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 171 (768)
T 3rgz_A 94 SGFKC--SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGW 171 (768)
T ss_dssp CCCCC--CTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHH
T ss_pred hhhcc--CCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhh
Confidence 45555 78889999999998887887 88889999999999998887777665 78899999999999988877776
Q ss_pred --ccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCC
Q 002875 86 --ISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSE 163 (872)
Q Consensus 86 --~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~ 163 (872)
+.++++|++|++++|.+.+..| +..+++|++|+|++|.+++.+|. ++.+++|++|++++|.+.+.+|..+.++++
T Consensus 172 ~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~ 248 (768)
T 3rgz_A 172 VLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTE 248 (768)
T ss_dssp HHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSS
T ss_pred hhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCC
Confidence 7889999999999998887554 48899999999999999988887 999999999999999999999999999999
Q ss_pred CcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCcccccC-CCCCEEeCcCCCCcCcCCccccCCCCCCEEEcc
Q 002875 164 VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRV-TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 242 (872)
Q Consensus 164 L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 242 (872)
|++|++++|.+.+.+|.. .+++|++|++++|.+.+.+|..+... ++|++|++++|.+++..|..|+.+++|+.|+++
T Consensus 249 L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 326 (768)
T 3rgz_A 249 LKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALS 326 (768)
T ss_dssp CCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECC
T ss_pred CCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECC
Confidence 999999999999888875 89999999999999999888888765 999999999999999999999999999999999
Q ss_pred cccCCCCCCcc-ccCCCCcceeecccccccccCCccCCCCC-CCcEEecCCCeeeecCCCCCCC--CCceeEEEcCCCcC
Q 002875 243 YNEMSGTVPES-LVQLPSLEILFIWNNYFSGSLPENLGRNS-KLRWVDVSTNNFNGSIPPDICS--GGVLFKLILFSNNF 318 (872)
Q Consensus 243 ~n~l~~~~p~~-l~~l~~L~~L~l~~n~l~~~~p~~~~~~~-~L~~L~ls~n~l~~~~p~~~~~--~~~l~~l~l~~n~~ 318 (872)
+|.+.+.+|.. +..+++|++|++++|.+.+.+|..+..+. +|+.|++++|.+.+.+|+.++. ...++.|.+.+|.+
T Consensus 327 ~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l 406 (768)
T 3rgz_A 327 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 406 (768)
T ss_dssp SSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEE
T ss_pred CCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcc
Confidence 99999778765 89999999999999999888887776665 6666666666666655555443 34455555555555
Q ss_pred CCCCCC------------------------CCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCCCCCchh
Q 002875 319 TGSLSP------------------------SLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDI 374 (872)
Q Consensus 319 ~~~~~~------------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 374 (872)
.+.+|. .+..+++|+.|++++|.+++.+|..+..+++|++|++++|++.+.+|..+
T Consensus 407 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 486 (768)
T 3rgz_A 407 TGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486 (768)
T ss_dssp EEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred ccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHH
Confidence 444444 44444455555555555554455555555555555555555555555555
Q ss_pred hhhcccccccccCCCCCCCcCCcccCCCcccccccccccccCCCCCC-CCcCCccceeeccccccCCCCCCcc-------
Q 002875 375 NQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESV------- 446 (872)
Q Consensus 375 ~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~-~~~~~~l~~l~l~~n~l~~~~p~~~------- 446 (872)
..+++|++|++++| .+.+.+|..+..+++|+.|++++|.+++.+|. +..+++|+.++++.|.+.|.+|..+
T Consensus 487 ~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~ 565 (768)
T 3rgz_A 487 SNCTNLNWISLSNN-RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 565 (768)
T ss_dssp GGCTTCCEEECCSS-CCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCB
T ss_pred hcCCCCCEEEccCC-ccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchh
Confidence 55555555555555 23345555555566666666666666555543 4566667777777766666555432
Q ss_pred ---------------------------------------------------------------cccccCcEEEccCccce
Q 002875 447 ---------------------------------------------------------------SNCVELERIDLANNKLI 463 (872)
Q Consensus 447 ---------------------------------------------------------------~~l~~L~~L~Ls~N~l~ 463 (872)
..+++|++|||++|+++
T Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~ 645 (768)
T 3rgz_A 566 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLS 645 (768)
T ss_dssp CCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCB
T ss_pred hhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCccc
Confidence 23456777777777777
Q ss_pred eccchhccCCCCCCEEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCCc-cccccCCccccCCCCC
Q 002875 464 GSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGK-VLRLMGSSAYAGNPKL 534 (872)
Q Consensus 464 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~~~~~~~~~~~np~~ 534 (872)
+.+|..++.++.|+.|+|++|+++|.+|..|+.+++|++||+++|+++|.+|..- .+..+....+.+|+..
T Consensus 646 g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 646 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred ccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 7777777778888888888888888888888888888888888888888777542 2333444455666543
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.6e-54 Score=518.05 Aligned_cols=522 Identities=22% Similarity=0.186 Sum_probs=393.3
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEc
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 97 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L 97 (872)
+.+++|+|++|.++++.+.+|.++++|++|+|++|.+.+..|+.|..+++|++|++++|.+++..+..|.++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 57888999999888888788888888999999888888888888888888999999888888666667888888999999
Q ss_pred cCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCcccc--CCCCCcEEEeecCCCc
Q 002875 98 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG--NMSEVQYLDIAGANLS 175 (872)
Q Consensus 98 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~--~l~~L~~L~ls~n~l~ 175 (872)
++|.+.+..|..|+++++|++|+|++|.+++..|..++.+++|++|++++|.+.+..+..+. .+++|+.|++++|.+.
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 88888877778888888899999988888888888888888888888888887766655443 4577788888877777
Q ss_pred ccCCccCcCC---------------------------CCCCEEEccCCCCcccCCcccccCCC--CCEEeCcCCCCcCcC
Q 002875 176 GSIPKELSNL---------------------------TKLESLFLFRNQLAGQVPWEFSRVTT--LKSLDLSDNRLSGPI 226 (872)
Q Consensus 176 ~~~p~~l~~l---------------------------~~L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~ 226 (872)
+..|..+..+ ++|+.|++++|.+.+..|..|..++. |++|++++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 6666544432 34555555666665555555555533 666666666666555
Q ss_pred CccccCCCCCCEEEcccccCCCCCCcccc---------------------------------CCCCcceeeccccccccc
Q 002875 227 PESFADLKNLRLLSLMYNEMSGTVPESLV---------------------------------QLPSLEILFIWNNYFSGS 273 (872)
Q Consensus 227 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~---------------------------------~l~~L~~L~l~~n~l~~~ 273 (872)
|..|+.+++|+.|++++|++.+..|..+. .+++|++|++++|.+.+.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 55666666666666666665554444444 445555555555555555
Q ss_pred CCccCCCCCCCcEEecCCCeeeec-CCCC-CC--CCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccC-c
Q 002875 274 LPENLGRNSKLRWVDVSTNNFNGS-IPPD-IC--SGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIP-L 348 (872)
Q Consensus 274 ~p~~~~~~~~L~~L~ls~n~l~~~-~p~~-~~--~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~ 348 (872)
.+..+..+++|++|++++|.+... ++.. +. ....++.+++.+|++.+..+..+..+++|+.|++++|.+++.++ .
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 424 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSG
T ss_pred ChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcc
Confidence 555555556666666665543221 1111 11 11356677777777777777788888888888888888877655 5
Q ss_pred cCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccccCCCCCC-CcCCcccCCCcccccccccccccCCCCCC-CCcCC
Q 002875 349 KFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLG-GMIPAQTWSLPSLQNFSASACNITGNLPP-FKSCK 426 (872)
Q Consensus 349 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~-~~~~~~~~~l~~L~~L~l~~~~l~~~~~~-~~~~~ 426 (872)
.|.++++|++|++++|++.+..+..+..+++|+.|++++|.... +..|..+..+++|+.|++++|.+++..+. +..++
T Consensus 425 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 504 (680)
T 1ziw_A 425 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE 504 (680)
T ss_dssp GGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccc
Confidence 78888888888888888887777888888888888888885321 45677788899999999999999876654 68899
Q ss_pred ccceeeccccccCCCCC--------CcccccccCcEEEccCccceeccchhccCCCCCCEEECCCCccccccCccccCCC
Q 002875 427 SISVIESHMNNLSGTIP--------ESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCS 498 (872)
Q Consensus 427 ~l~~l~l~~n~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 498 (872)
+|+.|++++|.+.+..+ ..+.++++|++|+|++|++....+..|..+++|+.|+|++|++++..+..|..++
T Consensus 505 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~ 584 (680)
T 1ziw_A 505 KLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQV 584 (680)
T ss_dssp TCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCC
Confidence 99999999999875422 2378899999999999999977777899999999999999999998888999999
Q ss_pred CCcEEECcCCeeeecCCCCc--cccccCCccccCCCCCCCCCC
Q 002875 499 SLTVLNVSFNDISGSIPSGK--VLRLMGSSAYAGNPKLCGAPL 539 (872)
Q Consensus 499 ~L~~L~ls~N~l~~~~p~~~--~~~~~~~~~~~~np~~c~~~l 539 (872)
+|++|++++|++++..|... .+..+....+.+||+.|+|+.
T Consensus 585 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 585 SLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 99999999999997554321 345566778999999999874
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8.1e-54 Score=505.15 Aligned_cols=509 Identities=19% Similarity=0.177 Sum_probs=434.0
Q ss_pred cCCcchhhhcCCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccc
Q 002875 7 ALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEI 86 (872)
Q Consensus 7 ~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~ 86 (872)
.||... .+.+++|+|++|.|+++.|.+|.++++|++|+|++|.+.+..|++|.++++|++|++++|.+.+..|.+|
T Consensus 26 ~iP~~l----~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 101 (606)
T 3t6q_A 26 EIPGTL----PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETAL 101 (606)
T ss_dssp SCCTTS----CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTT
T ss_pred cCcCCC----CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhh
Confidence 455543 3469999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred cCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCc-
Q 002875 87 SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ- 165 (872)
Q Consensus 87 ~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~- 165 (872)
+++++|++|+|++|.+.+..|..|+++++|++|++++|.+++.....+..+++|++|++++|.+.+..|..+..+++|+
T Consensus 102 ~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 181 (606)
T 3t6q_A 102 SGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATN 181 (606)
T ss_dssp SSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCS
T ss_pred cccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccce
Confidence 9999999999999999987788899999999999999999886555555699999999999999988888899999999
Q ss_pred -EEEeecCCCcccCCccCcCCCCCCEEEccCCCCc--------------------------ccCCcccccCC--CCCEEe
Q 002875 166 -YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA--------------------------GQVPWEFSRVT--TLKSLD 216 (872)
Q Consensus 166 -~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~--------------------------~~~~~~~~~l~--~L~~L~ 216 (872)
.|++++|.+.+..|..+.. .+|+.|++++|... ...+..|..+. +|+.|+
T Consensus 182 l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~ 260 (606)
T 3t6q_A 182 LSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESIN 260 (606)
T ss_dssp EEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEE
T ss_pred eEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEE
Confidence 8999999999888777654 67889988876511 11122233332 688999
Q ss_pred CcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeee
Q 002875 217 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 296 (872)
Q Consensus 217 L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~ 296 (872)
+++|.+++..+..|..+++|+.|++++|+++ .+|..+..+++|++|++++|.+.+..|..+..+++|++|++++|.+.+
T Consensus 261 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 339 (606)
T 3t6q_A 261 LQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRL 339 (606)
T ss_dssp CTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCC
T ss_pred eecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccc
Confidence 9999999888888999999999999999988 677888999999999999999998888888999999999999999887
Q ss_pred cCCCC-CCCCCceeEEEcCCCcCCCCC--CCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCCCCCc-
Q 002875 297 SIPPD-ICSGGVLFKLILFSNNFTGSL--SPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPT- 372 (872)
Q Consensus 297 ~~p~~-~~~~~~l~~l~l~~n~~~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~- 372 (872)
.+|.. +.....|+.+++++|.+.+.. +..+..+++|+.|++++|++.+..+..|..+++|+.|++++|.+.+..+.
T Consensus 340 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 419 (606)
T 3t6q_A 340 ELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQS 419 (606)
T ss_dssp BCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCC
T ss_pred ccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccch
Confidence 77765 667788999999999988765 67788999999999999999988888899999999999999998877654
Q ss_pred hhhhhcccccccccCCCCCCCcCCcccCCCcccccccccccccCCC-C---CCCCcCCccceeeccccccCCCCCCcccc
Q 002875 373 DINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN-L---PPFKSCKSISVIESHMNNLSGTIPESVSN 448 (872)
Q Consensus 373 ~~~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~-~---~~~~~~~~l~~l~l~~n~l~~~~p~~~~~ 448 (872)
.+..+++|++|++++|. +.+..|..+..+++|++|++++|.+++. + ..+..+++|+.|+++.|.+.+..|..+.+
T Consensus 420 ~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 498 (606)
T 3t6q_A 420 PFQNLHLLKVLNLSHSL-LDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTS 498 (606)
T ss_dssp TTTTCTTCCEEECTTCC-CBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTT
T ss_pred hhhCcccCCEEECCCCc-cCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcc
Confidence 47888999999999984 4555677777889999999999988762 2 23577888999999999998888888889
Q ss_pred cccCcEEEccCccceeccchhccCCCCCCEEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCCcccccc
Q 002875 449 CVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLM 523 (872)
Q Consensus 449 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~ 523 (872)
+++|++|+|++|++++..|+.+..++.| .|++++|++++..|..|..+++|++|++++|++++.++..+...|+
T Consensus 499 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~w~ 572 (606)
T 3t6q_A 499 LKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEWY 572 (606)
T ss_dssp CTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHHHHHHH
T ss_pred ccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHHHHHHH
Confidence 9999999999999998888899999999 9999999999888888888889999999999998877755444443
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.5e-53 Score=505.66 Aligned_cols=510 Identities=20% Similarity=0.220 Sum_probs=411.9
Q ss_pred chhhhcCCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCC
Q 002875 11 KPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 90 (872)
Q Consensus 11 ~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~ 90 (872)
.+.+ ++.|++|+|++|.++++.|.+|.++++|++|+|++|.+.+..+..|.++++|++|++++|.+.+..|.+|++++
T Consensus 44 ~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 121 (680)
T 1ziw_A 44 NFTR--YSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQK 121 (680)
T ss_dssp GGGG--GTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCT
T ss_pred HHhC--CCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccC
Confidence 4556 78899999999999888888888899999999999988876666788999999999999988877778888899
Q ss_pred CCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCC--CCCCCCEEEccCccCcccCCccc----------
Q 002875 91 HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG--MLKTVTHMEIGYNFYQGNIPWQL---------- 158 (872)
Q Consensus 91 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~--~L~~L~~L~l~~n~~~~~~p~~~---------- 158 (872)
+|++|+|++|.+.+..|..|+++++|++|++++|.+++..+..+. .+++|+.|++++|.+.+..|..+
T Consensus 122 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 201 (680)
T 1ziw_A 122 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLF 201 (680)
T ss_dssp TCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEE
T ss_pred CCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhh
Confidence 999999999988888888888888888888888888776665543 44667777777776655444333
Q ss_pred -----------------------------------------cCCC--CCcEEEeecCCCcccCCccCcCCCCCCEEEccC
Q 002875 159 -----------------------------------------GNMS--EVQYLDIAGANLSGSIPKELSNLTKLESLFLFR 195 (872)
Q Consensus 159 -----------------------------------------~~l~--~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~ 195 (872)
.++. +|+.|++++|.+.+..|..+..+++|++|++++
T Consensus 202 l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (680)
T 1ziw_A 202 LNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEY 281 (680)
T ss_dssp CTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCC
Confidence 2222 256666666666655555566666666666666
Q ss_pred CCCcccCCcccccCCCCCEEeCcCCCCcC-----cCCc----cccCCCCCCEEEcccccCCCCCCccccCCCCcceeecc
Q 002875 196 NQLAGQVPWEFSRVTTLKSLDLSDNRLSG-----PIPE----SFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIW 266 (872)
Q Consensus 196 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-----~~~~----~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 266 (872)
|.+.+..|..|..+++|++|++++|...+ .+|. .|..+++|+.|++++|.+.+..+..+..+++|++|+++
T Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 361 (680)
T 1ziw_A 282 NNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS 361 (680)
T ss_dssp CCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECT
T ss_pred CccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECC
Confidence 66666555566666666666666543322 1222 56778889999999999998888889999999999999
Q ss_pred ccccccc--CCccCCC--CCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCC-CCCCCCCCCcEEEcCCCc
Q 002875 267 NNYFSGS--LPENLGR--NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLS-PSLSNCSSLVRLRLEDNS 341 (872)
Q Consensus 267 ~n~l~~~--~p~~~~~--~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~-~~~~~l~~L~~L~L~~N~ 341 (872)
+|.+... .+..+.. .++|+.|++++|.+.+..|..+.....|+.|++++|.+.+.++ ..+.++++|+.|++++|+
T Consensus 362 ~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~ 441 (680)
T 1ziw_A 362 NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNK 441 (680)
T ss_dssp TCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCS
T ss_pred CCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCC
Confidence 9985432 2223332 3589999999999998888888889999999999999987665 678999999999999999
Q ss_pred cccccCccCCCCCCCcEEEcCCCcCC--CCCCchhhhhcccccccccCCCCCCCcCCcccCCCcccccccccccccCCC-
Q 002875 342 FSGEIPLKFSQLPDINYIDLSRNGFT--GGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN- 418 (872)
Q Consensus 342 l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~- 418 (872)
+.+..+..|..+++|+.|++++|.+. +.+|..+..+++|++|++++|. +.+..+..+..+++|+.|++++|.+++.
T Consensus 442 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~-l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~ 520 (680)
T 1ziw_A 442 YLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNN-IANINDDMLEGLEKLEILDLQHNNLARLW 520 (680)
T ss_dssp EEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCGGGG
T ss_pred cceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCC-CCcCChhhhccccccCEEeCCCCCccccc
Confidence 99999999999999999999999986 5678899999999999999994 5556666788899999999999998752
Q ss_pred --------CCCCCcCCccceeeccccccCCCCCCcccccccCcEEEccCccceeccchhccCCCCCCEEECCCCcccccc
Q 002875 419 --------LPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQI 490 (872)
Q Consensus 419 --------~~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 490 (872)
...+..+++|+.++++.|.+....+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 521 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~ 600 (680)
T 1ziw_A 521 KHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE 600 (680)
T ss_dssp STTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCC
T ss_pred hhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccC
Confidence 123688999999999999999655567999999999999999999988889999999999999999999999
Q ss_pred Ccccc-CCCCCcEEECcCCeeeecCCC-Ccccccc
Q 002875 491 PAKFG-SCSSLTVLNVSFNDISGSIPS-GKVLRLM 523 (872)
Q Consensus 491 ~~~~~-~l~~L~~L~ls~N~l~~~~p~-~~~~~~~ 523 (872)
+..|. .+++|+.|++++|++.+.++. .++..|+
T Consensus 601 ~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~ 635 (680)
T 1ziw_A 601 KKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWI 635 (680)
T ss_dssp HHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECCS
T ss_pred hhHhcccccccCEEEccCCCcccCCccHHHHHHHH
Confidence 98887 789999999999999998885 5555554
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-52 Score=510.07 Aligned_cols=492 Identities=20% Similarity=0.173 Sum_probs=303.0
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcc-cCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG-HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 95 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L 95 (872)
.+.+++|||++|.|+++.|.+|.++++|++|+|++|.+.+ +.|++|+++++|++|+|++|.+.+..|.+|.++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 5689999999999999999999999999999999996544 448899999999999999999998889999999999999
Q ss_pred EccCCcccccCCcc--cCCCCCCcEeeCccCcCCccCC-ccCCCCCCCCEEEccCccCcccCCccccCC--CCCcEEEee
Q 002875 96 NLAGSYFSGPIPSQ--FGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNM--SEVQYLDIA 170 (872)
Q Consensus 96 ~L~~n~~~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p-~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l--~~L~~L~ls 170 (872)
+|++|.+.+..|.. |+++++|++|+|++|.+++..+ ..|+.+++|++|++++|.+.+..+..+..+ ++|+.|+++
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999998866655 9999999999999999987755 579999999999999999998888888877 899999999
Q ss_pred cCCCcccCCccCcCCCC------CCEEEccCCCCcccCCcccccC---CCCCEEeCcC---------CCCcCcCCccccC
Q 002875 171 GANLSGSIPKELSNLTK------LESLFLFRNQLAGQVPWEFSRV---TTLKSLDLSD---------NRLSGPIPESFAD 232 (872)
Q Consensus 171 ~n~l~~~~p~~l~~l~~------L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~---------N~l~~~~~~~~~~ 232 (872)
+|.+.+..|..+..+++ |+.|++++|.+.+..+..+... +.++.|.++. +.+....+..|.+
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 99999888887776665 9999999998887666555432 2344444331 1122222222333
Q ss_pred C--CCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeE
Q 002875 233 L--KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFK 310 (872)
Q Consensus 233 l--~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~ 310 (872)
+ ++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+..|..|..+++|+.|++++|.+.+..|..+..+..|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 2 34455555555444444444444455555555555544444444444445555555555444443444444444555
Q ss_pred EEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccc------------------cCccCCCCCCCcEEEcCCCcCCCCCCc
Q 002875 311 LILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGE------------------IPLKFSQLPDINYIDLSRNGFTGGIPT 372 (872)
Q Consensus 311 l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~------------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 372 (872)
|++.+|.+....+..|.++++|+.|++++|.+++. +|.. ..+++.|++++|++.+....
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~---~~~l~~L~ls~N~l~~l~~~ 419 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKI---NLTANLIHLSENRLENLDIL 419 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCC---CTTCCEEECCSCCCCSSTTH
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCccccccc---ccccceeecccCccccCchh
Confidence 55555544444444444445555555555544421 1211 23344455555544432111
Q ss_pred -hhhhhcccccccccCCCCCCCcCCcccCCCcccccccccccccCCCC------CCCCcCCccceeeccccccCCCCCCc
Q 002875 373 -DINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNL------PPFKSCKSISVIESHMNNLSGTIPES 445 (872)
Q Consensus 373 -~~~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~------~~~~~~~~l~~l~l~~n~l~~~~p~~ 445 (872)
.+..+++|++|++++|....-........+++|+.|++++|.++... ..+..+++|+.|++++|.+++..|..
T Consensus 420 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 499 (844)
T 3j0a_A 420 YFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGV 499 (844)
T ss_dssp HHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTS
T ss_pred hhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhH
Confidence 12244455555555553211111111223445555555555443211 11344455555555555555544444
Q ss_pred ccccccCcEEEccCccceeccchhccCCCCCCEEECCCCccccccCccccCCCCCcEEECcCCeeeecCCC
Q 002875 446 VSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPS 516 (872)
Q Consensus 446 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~ 516 (872)
|.++++|++|+|++|++++..+..+. ++|+.|+|++|++++..|..|. +|+.|++++|++.+.++.
T Consensus 500 ~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 500 FSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICECEL 565 (844)
T ss_dssp SSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCSSSC
T ss_pred ccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCccccccc
Confidence 55555555555555555544444433 4455555555555555544432 445555555555544443
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.2e-52 Score=489.04 Aligned_cols=515 Identities=18% Similarity=0.149 Sum_probs=451.0
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
.-+.++.++..++ .+|..+. .++++|+|++|.|++..|.+|..+++|++||+++|.+.+..|.+|.++++|++|+|+
T Consensus 13 ~~~~~~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 89 (606)
T 3t6q_A 13 VNKTYNCENLGLN-EIPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLT 89 (606)
T ss_dssp TTTEEECTTSCCS-SCCTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCceEECCCCCcc-cCcCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCC
Confidence 3557899999887 4566666 479999999999999989999999999999999999999999999999999999999
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccC
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 178 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 178 (872)
+|.+.+..|..|+++++|++|++++|.+++..+..++.+++|++|++++|.+.+..+..+..+++|++|++++|.+.+..
T Consensus 90 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 169 (606)
T 3t6q_A 90 ANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLS 169 (606)
T ss_dssp TCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEEC
T ss_pred CCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccC
Confidence 99999999999999999999999999999888889999999999999999998744334445999999999999999888
Q ss_pred CccCcCCCCCC--EEEccCCCCcccCCcccccCCCCCEEeCcCCCCc--------------------------CcCCccc
Q 002875 179 PKELSNLTKLE--SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS--------------------------GPIPESF 230 (872)
Q Consensus 179 p~~l~~l~~L~--~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--------------------------~~~~~~~ 230 (872)
|..++.+++|+ .|++++|.+.+..|..|.. .+|+.|++++|... ...+..+
T Consensus 170 ~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~ 248 (606)
T 3t6q_A 170 KEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVF 248 (606)
T ss_dssp HHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGG
T ss_pred hhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHh
Confidence 88999999999 8999999999988877655 57899999887511 1112233
Q ss_pred cCCC--CCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCce
Q 002875 231 ADLK--NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVL 308 (872)
Q Consensus 231 ~~l~--~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l 308 (872)
..+. +|+.|++++|.+.+..+..+..+++|++|++++|.++ .+|..+..+++|++|++++|.+.+..|..+.....|
T Consensus 249 ~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 327 (606)
T 3t6q_A 249 EGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327 (606)
T ss_dssp GGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTC
T ss_pred chhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcC
Confidence 3333 7899999999999888888999999999999999998 688889999999999999999997777788888999
Q ss_pred eEEEcCCCcCCCCCCC-CCCCCCCCcEEEcCCCcccccc--CccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccc
Q 002875 309 FKLILFSNNFTGSLSP-SLSNCSSLVRLRLEDNSFSGEI--PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNV 385 (872)
Q Consensus 309 ~~l~l~~n~~~~~~~~-~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 385 (872)
+.+.+.+|.+.+.++. .+..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+..|..+..+++|++|++
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp SEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred CEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 9999999999877665 4899999999999999999876 778999999999999999999888999999999999999
Q ss_pred cCCCCCCCcCCcccCCCcccccccccccccCCCCCC-CCcCCccceeeccccccCCC---CCCcccccccCcEEEccCcc
Q 002875 386 SNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGT---IPESVSNCVELERIDLANNK 461 (872)
Q Consensus 386 s~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~-~~~~~~l~~l~l~~n~l~~~---~p~~~~~l~~L~~L~Ls~N~ 461 (872)
++|.......+..+..+++|+.|++++|.+++..|. +..+++|+.|+++.|.+.+. .+..+..+++|++|++++|+
T Consensus 408 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp TTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSC
T ss_pred CCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCc
Confidence 999654333344577899999999999999887664 68899999999999999762 34678999999999999999
Q ss_pred ceeccchhccCCCCCCEEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCC-ccccccCCccccCCCCCCCCCC
Q 002875 462 LIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG-KVLRLMGSSAYAGNPKLCGAPL 539 (872)
Q Consensus 462 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~np~~c~~~l 539 (872)
+++..|..|..+++|++|+|++|++++..|..|..+++| +|++++|++++..|.. .....+....+.+||+.|+|+.
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred cCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 999999999999999999999999999999999999999 9999999999765543 2344567778999999998753
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1e-51 Score=487.12 Aligned_cols=509 Identities=19% Similarity=0.194 Sum_probs=262.9
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEc
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 97 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L 97 (872)
+.+++|+|++|.++++.+.+|.++++|++|+|++|.+.++.|++|.++++|++|+|++|.+++..|.+|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 45666666666666666666666666666666666666666666666666666666666666655666666666666666
Q ss_pred cCCcccccCCcccCCCCCCcEeeCccCcCCc-cCCccCCCCCCCCEEEccCccCcccCCccccCCCCCc----EEEeecC
Q 002875 98 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ----YLDIAGA 172 (872)
Q Consensus 98 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~----~L~ls~n 172 (872)
++|.+.+..+..|+++++|++|++++|.+++ .+|..++.+++|++|++++|.+.+..|..+..+.+|+ .|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 6666665555666666666666666666654 3466666666666666666666665555555444333 5666666
Q ss_pred CCcccCCccCcCCCCCCEEEccCCCCc-ccCCcccccCCCCCEEeCcCCCCcC------cCCccccCCC--CCCEEEc-c
Q 002875 173 NLSGSIPKELSNLTKLESLFLFRNQLA-GQVPWEFSRVTTLKSLDLSDNRLSG------PIPESFADLK--NLRLLSL-M 242 (872)
Q Consensus 173 ~l~~~~p~~l~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~------~~~~~~~~l~--~L~~L~L-~ 242 (872)
.+.+..+..+... +|+.|++++|.+. +..|..+.+++.|+.+++..+.+.. ..+..+..+. .++.+++ .
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 6665444444333 6666666666654 2333444555555544442111100 0000011111 1111222 3
Q ss_pred cccCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCC
Q 002875 243 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSL 322 (872)
Q Consensus 243 ~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~ 322 (872)
.|.+.+..|. +..+++|+.|++++|.+. .+| .+..+++|+.|++++|.+ +.+| .+ ....++.+.+.+|...+..
T Consensus 271 ~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~ 344 (606)
T 3vq2_A 271 TNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF 344 (606)
T ss_dssp CTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC
T ss_pred cccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch
Confidence 3333333333 444555555555555543 233 444455555555555555 3444 22 4445555555555333222
Q ss_pred CCCCCCCCCCcEEEcCCCccccc--cCccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccccCCCCCCCcCC-ccc
Q 002875 323 SPSLSNCSSLVRLRLEDNSFSGE--IPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIP-AQT 399 (872)
Q Consensus 323 ~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~~~~~-~~~ 399 (872)
.+..+++|+.|++++|.+++. .+..+..+++|++|++++|.+.+ +|..+..+++|++|++++|.. .+..+ ..+
T Consensus 345 --~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l-~~~~~~~~~ 420 (606)
T 3vq2_A 345 --KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTL-KRVTEFSAF 420 (606)
T ss_dssp --CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEE-ESTTTTTTT
T ss_pred --hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCcc-CCccChhhh
Confidence 334455555555555555443 24444455555555555555443 334444555555555555522 22222 334
Q ss_pred CCCcccccccccccccCCCCCC-CCcCCccceeeccccccCC-CCCCcccccccCcEEEccCccceeccchhccCCCCCC
Q 002875 400 WSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSG-TIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLG 477 (872)
Q Consensus 400 ~~l~~L~~L~l~~~~l~~~~~~-~~~~~~l~~l~l~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 477 (872)
..+++|+.|++++|.+++..|. +..+++|+.++++.|.+.+ .+|..+.++++|++|++++|++++..|..+..+++|+
T Consensus 421 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 500 (606)
T 3vq2_A 421 LSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQ 500 (606)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCC
Confidence 4455555555555555443332 3445555555555555554 2445555555555555555555555555555555555
Q ss_pred EEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCC-ccc-cccCCccccCCCCCCCCC
Q 002875 478 VLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG-KVL-RLMGSSAYAGNPKLCGAP 538 (872)
Q Consensus 478 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~-~~~~~~~~~~np~~c~~~ 538 (872)
+|++++|++++..|..|..+++|++|++++|+++ .+|.. ... +.+....+.+||+.|+|+
T Consensus 501 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 501 LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp EEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred EEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 5555555555555555555555555555555555 23322 011 113333455555555554
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.7e-51 Score=485.37 Aligned_cols=503 Identities=19% Similarity=0.200 Sum_probs=433.6
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEc
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 97 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L 97 (872)
...+.++.+++.++.+ |..+. ++|++|+|++|.+.+..+..|.++++|++||+++|.+++..|.+|.++++|++|+|
T Consensus 11 ~~~~~~~c~~~~l~~i-p~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~L 87 (606)
T 3vq2_A 11 VPNITYQCMDQKLSKV-PDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLIL 87 (606)
T ss_dssp ETTTEEECTTSCCSSC-CTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCceEccCCCcccC-CCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeEC
Confidence 3457899999999854 55555 89999999999999998889999999999999999999888999999999999999
Q ss_pred cCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcc-cCCccccCCCCCcEEEeecCCCcc
Q 002875 98 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSG 176 (872)
Q Consensus 98 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~-~~p~~~~~l~~L~~L~ls~n~l~~ 176 (872)
++|.+.+..|..|+++++|++|+|++|.+++..+..++.+++|++|++++|.+.+ .+|..++++++|++|++++|.+.+
T Consensus 88 s~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~ 167 (606)
T 3vq2_A 88 TGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167 (606)
T ss_dssp TTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE
T ss_pred CCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee
Confidence 9999999889999999999999999999998888899999999999999999876 679999999999999999999999
Q ss_pred cCCccCcCCCCCC----EEEccCCCCcccCCcccccCCCCCEEeCcCCCCc-CcCCccccCCCCCCEEEcccccCCCC--
Q 002875 177 SIPKELSNLTKLE----SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS-GPIPESFADLKNLRLLSLMYNEMSGT-- 249 (872)
Q Consensus 177 ~~p~~l~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~-- 249 (872)
..|..++.+++|+ +|++++|.+.+..+..+... +|+.|++++|.++ +..|..+..+++|+.+++..+.+...
T Consensus 168 ~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~ 246 (606)
T 3vq2_A 168 ITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERN 246 (606)
T ss_dssp ECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCC
T ss_pred cChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCc
Confidence 8888887776655 89999999998877777665 8999999999987 35678899999999999877665432
Q ss_pred ----CCccccCCC--Ccceeec-ccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCC
Q 002875 250 ----VPESLVQLP--SLEILFI-WNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSL 322 (872)
Q Consensus 250 ----~p~~l~~l~--~L~~L~l-~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~ 322 (872)
.+..+..+. +++.+++ ..|.+.+..|. +..+++|+.|++++|.+. .+| .+.....++.+.+.+|.+ +.+
T Consensus 247 l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~l 322 (606)
T 3vq2_A 247 LEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQF 322 (606)
T ss_dssp CSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSC
T ss_pred ccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-ccc
Confidence 112222222 4566677 67788888887 889999999999999996 566 777888999999999999 667
Q ss_pred CCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCCC--CCchhhhhcccccccccCCCCCCCcCCcccC
Q 002875 323 SPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGG--IPTDINQASKLEYFNVSNNPKLGGMIPAQTW 400 (872)
Q Consensus 323 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~ls~n~~l~~~~~~~~~ 400 (872)
| .+ .+++|+.|++++|+..+.. .+..+++|++|++++|.+.+. +|..+..+++|++|++++|... .+|..+.
T Consensus 323 p-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~--~~~~~~~ 396 (606)
T 3vq2_A 323 P-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI--IMSANFM 396 (606)
T ss_dssp C-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE--EECCCCT
T ss_pred c-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc--cchhhcc
Confidence 7 45 8999999999999665544 678999999999999999866 4788899999999999999632 3567788
Q ss_pred CCcccccccccccccCCCCC--CCCcCCccceeeccccccCCCCCCcccccccCcEEEccCcccee-ccchhccCCCCCC
Q 002875 401 SLPSLQNFSASACNITGNLP--PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIG-SIPEVLARLPVLG 477 (872)
Q Consensus 401 ~l~~L~~L~l~~~~l~~~~~--~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~ 477 (872)
.+++|+.|++++|.+.+..| .+..+++|+.++++.|.+.+..|..+.++++|++|++++|++.+ .+|..+..+++|+
T Consensus 397 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 476 (606)
T 3vq2_A 397 GLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLT 476 (606)
T ss_dssp TCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred CCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCC
Confidence 89999999999999988766 57899999999999999999999999999999999999999998 5789999999999
Q ss_pred EEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCCc-cccccCCccccCCCCC
Q 002875 478 VLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGK-VLRLMGSSAYAGNPKL 534 (872)
Q Consensus 478 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~~~~~~~~~~~np~~ 534 (872)
+|++++|++++..|..|..+++|++|++++|++++..|..- ....+....+.+|...
T Consensus 477 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 477 FLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred EEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 99999999999999999999999999999999998765431 2334455566677543
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-49 Score=481.54 Aligned_cols=471 Identities=20% Similarity=0.225 Sum_probs=402.6
Q ss_pred CcccCCcchhhhcCCCCcEEECCCCCC-cccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCcccc
Q 002875 4 LSGALPGKPLRIFFNELVDLNLSHNSF-SGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV 82 (872)
Q Consensus 4 ~~~~~~~~~~~~~~~~L~~L~L~~n~i-~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~ 82 (872)
+.+..|..+.+ ++.|++|+|++|.+ ..+.|.+|.++++|++|+|++|.+.+..|+.|.++++|++|+|++|.+++..
T Consensus 36 i~~i~~~~~~~--l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 113 (844)
T 3j0a_A 36 IRTVTASSFPF--LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAV 113 (844)
T ss_dssp CCEECSSSCSS--CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCC
T ss_pred CCccChhHCcc--cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCccc
Confidence 45555667777 89999999999954 4455889999999999999999999999999999999999999999999866
Q ss_pred Ccc--ccCCCCCCEEEccCCcccccCC-cccCCCCCCcEeeCccCcCCccCCccCCCC--CCCCEEEccCccCcccCCcc
Q 002875 83 PAE--ISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAELGML--KTVTHMEIGYNFYQGNIPWQ 157 (872)
Q Consensus 83 p~~--~~~L~~L~~L~L~~n~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L--~~L~~L~l~~n~~~~~~p~~ 157 (872)
|.. |.++++|++|+|++|.+.+..+ ..|+++++|++|+|++|.+++..+..+..+ ++|+.|+++.|.+.+..|..
T Consensus 114 ~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~ 193 (844)
T 3j0a_A 114 LKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVD 193 (844)
T ss_dssp STTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCC
T ss_pred ccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccc
Confidence 665 9999999999999999987655 579999999999999999999999999888 89999999999999888877
Q ss_pred ccCCCC------CcEEEeecCCCcccCCccCcC--------------------------------------CCCCCEEEc
Q 002875 158 LGNMSE------VQYLDIAGANLSGSIPKELSN--------------------------------------LTKLESLFL 193 (872)
Q Consensus 158 ~~~l~~------L~~L~ls~n~l~~~~p~~l~~--------------------------------------l~~L~~L~L 193 (872)
+..+.+ |+.|++++|.+.+..+..+.. .++|+.|++
T Consensus 194 ~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~L 273 (844)
T 3j0a_A 194 WGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDL 273 (844)
T ss_dssp CCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEEC
T ss_pred hhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEEC
Confidence 766655 999999999887665544321 267999999
Q ss_pred cCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeeccccccccc
Q 002875 194 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGS 273 (872)
Q Consensus 194 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 273 (872)
++|.+.+..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+.
T Consensus 274 s~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 353 (844)
T 3j0a_A 274 SHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAII 353 (844)
T ss_dssp TTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCC
T ss_pred CCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCcc
Confidence 99999988888899999999999999999988888999999999999999999988888999999999999999999888
Q ss_pred CCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccC-ccCCC
Q 002875 274 LPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIP-LKFSQ 352 (872)
Q Consensus 274 ~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~ 352 (872)
.+..+..+++|+.|++++|.+.+ ++ ..+.++.+.+.+|++... |.. ..+++.|++++|++++... ..+..
T Consensus 354 ~~~~~~~l~~L~~L~Ls~N~l~~-i~----~~~~L~~L~l~~N~l~~l-~~~---~~~l~~L~ls~N~l~~l~~~~~~~~ 424 (844)
T 3j0a_A 354 QDQTFKFLEKLQTLDLRDNALTT-IH----FIPSIPDIFLSGNKLVTL-PKI---NLTANLIHLSENRLENLDILYFLLR 424 (844)
T ss_dssp CSSCSCSCCCCCEEEEETCCSCC-CS----SCCSCSEEEEESCCCCCC-CCC---CTTCCEEECCSCCCCSSTTHHHHTT
T ss_pred ChhhhcCCCCCCEEECCCCCCCc-cc----CCCCcchhccCCCCcccc-ccc---ccccceeecccCccccCchhhhhhc
Confidence 88889999999999999999873 22 256789999999998843 332 5679999999999986532 23568
Q ss_pred CCCCcEEEcCCCcCCCCCCc-hhhhhcccccccccCCCCCC----CcCCcccCCCcccccccccccccCCCCCC-CCcCC
Q 002875 353 LPDINYIDLSRNGFTGGIPT-DINQASKLEYFNVSNNPKLG----GMIPAQTWSLPSLQNFSASACNITGNLPP-FKSCK 426 (872)
Q Consensus 353 l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~ls~n~~l~----~~~~~~~~~l~~L~~L~l~~~~l~~~~~~-~~~~~ 426 (872)
+++|+.|++++|++++..+. .+..+++|++|++++|.... +..+..+..+++|+.|++++|.+++..|. +..++
T Consensus 425 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 504 (844)
T 3j0a_A 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLT 504 (844)
T ss_dssp CTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCC
T ss_pred CCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchh
Confidence 99999999999999876543 35567899999999995431 33345567889999999999999987765 68999
Q ss_pred ccceeeccccccCCCCCCcccccccCcEEEccCccceeccchhccCCCCCCEEECCCCcccccc
Q 002875 427 SISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQI 490 (872)
Q Consensus 427 ~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 490 (872)
+|+.|+++.|.+++..|..+. ++|+.|+|++|++++..|..| +.|+.|++++|.+...-
T Consensus 505 ~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 505 ALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICEC 563 (844)
T ss_dssp SCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSS
T ss_pred hhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCccccc
Confidence 999999999999987777665 899999999999999998775 47899999999987643
No 11
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.3e-51 Score=430.83 Aligned_cols=245 Identities=17% Similarity=0.199 Sum_probs=197.1
Q ss_pred hhhhccCCCCCceeeeec------CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEc
Q 002875 612 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~------~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 683 (872)
..+.||+|+||+||||+. .+++.||||+++... ...+.|.+|+.++++++|||||+++|+|.+++..|||||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence 667899999999999985 367899999997532 235789999999999999999999999999999999999
Q ss_pred ccCCCChHHHhhC------------------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeE
Q 002875 684 YLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 745 (872)
Q Consensus 684 y~~~g~L~~~l~~------------------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki 745 (872)
||++|||.++|+. ..+|.++..|+.|||+||+|||+. +||||||||+|||+++++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCEEE
Confidence 9999999999953 357899999999999999999999 9999999999999999999999
Q ss_pred ccccccccccccCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcccccccccc
Q 002875 746 AEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 820 (872)
Q Consensus 746 ~dfg~~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 820 (872)
+|||+++....... ....++..|++||+.....++.++|||||||++|||+| |..||.+.... .....+
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~------~~~~~i 260 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------DVVEMI 260 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH------HHHHHH
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH------HHHHHH
Confidence 99999986533221 12235556788898888899999999999999999999 67777643211 111111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 821 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
......+.++ +.+.++.+++.+||+.||++||||+||+++|+.+.
T Consensus 261 ~~~~~~~~p~---~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 RNRQVLPCPD---DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HcCCCCCCcc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 1111111122 23356778999999999999999999999998764
No 12
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.7e-51 Score=429.31 Aligned_cols=245 Identities=18% Similarity=0.220 Sum_probs=196.6
Q ss_pred hhhhccCCCCCceeeeec------CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcc
Q 002875 612 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 684 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~------~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 684 (872)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.|.+|+++|++++|||||+++|+|.+++..||||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 678899999999999985 358899999997643 3467899999999999999999999999999999999999
Q ss_pred cCCCChHHHhhC---------------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccc
Q 002875 685 LPNGNLSEKIRT---------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 749 (872)
Q Consensus 685 ~~~g~L~~~l~~---------------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg 749 (872)
|++|||.++|+. ..+|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCcc
Confidence 999999999964 358999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcccccccccccccc
Q 002875 750 FKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN 824 (872)
Q Consensus 750 ~~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 824 (872)
+|+....... ....++..|++||+.....++.++|||||||++|||+| |+.||.+.... +.+..+....
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i~~~~ 247 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------EVIECITQGR 247 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHHTC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHHcCC
Confidence 9976433221 11235566788899988899999999999999999999 78887643211 1111111111
Q ss_pred ccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 825 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 825 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
....++ ..+.++.+++.+||+.||++||||+|+.+.|+.+.
T Consensus 248 ~~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 248 VLQRPR---TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp CCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 111122 22346778999999999999999999999998763
No 13
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-50 Score=431.80 Aligned_cols=245 Identities=17% Similarity=0.199 Sum_probs=193.0
Q ss_pred hhhhccCCCCCceeeeec------CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcc
Q 002875 612 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 684 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~------~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 684 (872)
..++||+|+||+||+|+. .+|+.||||+++... ...+.|.+|+++|++++|||||+++|+|.+++..||||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 567899999999999975 358899999997543 3467899999999999999999999999999999999999
Q ss_pred cCCCChHHHhhC-----------------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcc
Q 002875 685 LPNGNLSEKIRT-----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 747 (872)
Q Consensus 685 ~~~g~L~~~l~~-----------------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~d 747 (872)
|++|+|.++++. ..+|.++..|+.|||+||+|||+. +||||||||+|||+++++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEcc
Confidence 999999999964 257899999999999999999998 999999999999999999999999
Q ss_pred ccccccccccCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcccccccccccc
Q 002875 748 FGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN 822 (872)
Q Consensus 748 fg~~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 822 (872)
||+++....... ....++..|++||+..+..++.++|||||||++|||+| |+.||.+....+ .+..+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~------~~~~i~~ 275 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------AIDCITQ 275 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH------HHHHHHH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH------HHHHHHc
Confidence 999986533221 12235556788899988899999999999999999999 788886433211 1111111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 823 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
......++ ...+++.+++.+||+.||++||||+||+++|+.+.
T Consensus 276 g~~~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 276 GRELERPR---ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp TCCCCCCT---TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCcc---cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 11111122 22346778999999999999999999999998764
No 14
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-50 Score=422.95 Aligned_cols=247 Identities=16% Similarity=0.208 Sum_probs=192.0
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeecc---chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
..+.||+|+||+||+|+... .||||+++.. ....+.|.+|+++|++++|||||+++|+|.+ +..|||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCC
Confidence 67889999999999998743 6999998743 2345778999999999999999999999865 5689999999999
Q ss_pred ChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC----CCC
Q 002875 689 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----GSF 761 (872)
Q Consensus 689 ~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~----~~~ 761 (872)
+|.++++. ..+|.++..|+.|||+||+|||+. +||||||||+|||+++++.+||+|||+|+...... ...
T Consensus 117 sL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~ 193 (307)
T 3omv_A 117 SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193 (307)
T ss_dssp BHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------------
T ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecc
Confidence 99999964 468999999999999999999998 99999999999999999999999999997654321 122
Q ss_pred cccccccCchhhhcc---cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002875 762 PAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~---~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
..++..|++||++.. ..++.++|||||||++|||+||+.||.+...... ...........+.. .....+...+
T Consensus 194 ~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~~~~~~~p~~---~~~~~~~~~~ 269 (307)
T 3omv_A 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYASPDL---SKLYKNCPKA 269 (307)
T ss_dssp CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHTTCCCCCS---TTSCTTSCHH
T ss_pred cccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHHhcCCCCCCc---ccccccchHH
Confidence 346667888888753 3588899999999999999999999975432111 00001111111111 1111233456
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 839 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
+.+++.+||+.||++||||+||+++|+.++
T Consensus 270 l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 270 MKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp HHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 778999999999999999999999988664
No 15
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.2e-50 Score=423.87 Aligned_cols=254 Identities=20% Similarity=0.240 Sum_probs=195.8
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCC----eeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lv~ey~~~ 687 (872)
..+.||+|+||+||+|+. +|+.||||+++........+..|+..+.+++|||||+++|+|.+++ +.|||||||++
T Consensus 7 L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 668899999999999987 7999999999765544445556777788999999999999998653 57999999999
Q ss_pred CChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhC-----CCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC-
Q 002875 688 GNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHD-----CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 760 (872)
Q Consensus 688 g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~-----~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~- 760 (872)
|+|.++++. ..+|.++.+++.|+|+||+|||++ +.++||||||||+|||+|+++.+||+|||+++........
T Consensus 86 gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 165 (303)
T 3hmm_A 86 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 165 (303)
T ss_dssp CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEE
T ss_pred CcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCce
Confidence 999999976 468999999999999999999976 3569999999999999999999999999999765432211
Q ss_pred -----CcccccccCchhhhccc------CCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc----------cc---
Q 002875 761 -----FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------GL--- 816 (872)
Q Consensus 761 -----~~~~~~~~~~~e~~~~~------~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~----------~~--- 816 (872)
...++.+|++||++.+. .++.++|||||||++|||+||+.|+......+ .+.. ..
T Consensus 166 ~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~ 244 (303)
T 3hmm_A 166 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ-LPYYDLVPSDPSVEEMRKV 244 (303)
T ss_dssp SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCC-CTTTTTSCSSCCHHHHHHH
T ss_pred eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccc-ccchhcccccchHHHHHHH
Confidence 12366778888987543 46778999999999999999988765332211 1110 00
Q ss_pred -ccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 817 -LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 817 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
..+..++. .+......+..+.+.+++.+||+.||++||||+||++.|+.+.
T Consensus 245 ~~~~~~rp~-~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 245 VCEQKLRPN-IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HTTSCCCCC-CCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcccCCCC-CCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 01111111 1101112345667889999999999999999999999998774
No 16
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1e-49 Score=423.56 Aligned_cols=242 Identities=15% Similarity=0.240 Sum_probs=200.4
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 689 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~ 689 (872)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||+++++|++++..|||||||++|+
T Consensus 78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 157 (346)
T 4fih_A 78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157 (346)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred EeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 778999999999999985 689999999997543 335668899999999999999999999999999999999999999
Q ss_pred hHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--CCccccc
Q 002875 690 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 766 (872)
Q Consensus 690 L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--~~~~~~~ 766 (872)
|.+++.+ ..++.+...|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+....... ....++.
T Consensus 158 L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp 234 (346)
T 4fih_A 158 LTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 234 (346)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCc
Confidence 9999865 568889999999999999999999 999999999999999999999999999986543322 2334788
Q ss_pred ccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002875 767 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 846 (872)
Q Consensus 767 ~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c 846 (872)
+|++||++....|+.++||||+||++|||+||+.||.+..... .+..+.... ....+.......++.+++.+|
T Consensus 235 ~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 235 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AMKMIRDNL-PPRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSS-CCCCSCGGGSCHHHHHHHHHH
T ss_pred CcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHcCC-CCCCCccccCCHHHHHHHHHH
Confidence 8999999988889999999999999999999999997543211 111111111 111222233445678999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 002875 847 TRSTPSDRPSMEEALKL 863 (872)
Q Consensus 847 l~~dp~~Rpt~~~v~~~ 863 (872)
|+.||++|||++|++++
T Consensus 308 L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 308 LVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999875
No 17
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-47 Score=448.14 Aligned_cols=510 Identities=20% Similarity=0.195 Sum_probs=396.3
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEc
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 97 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L 97 (872)
..++.|+|++|.++++.+.+|.++++|++|+|++|.+.+..++.|..+++|++|++++|.+++..|..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46888888888888888888888888888888888888777788888888888888888888777778888888888888
Q ss_pred cCCcccccCCcccCCCCCCcEeeCccCcCCc-cCCccCCCCCCCCEEEccCccCcccCCccccCCCCC----cEEEeecC
Q 002875 98 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV----QYLDIAGA 172 (872)
Q Consensus 98 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L----~~L~ls~n 172 (872)
++|.+.+..+..|+++++|++|++++|.+++ .+|..++.+++|++|++++|.+.+..|..+..+.+| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 8888876666578888888888888888876 357888888888888888888777777777777777 78888888
Q ss_pred CCcccCCccCcCCCCCCEEEccCCCCcc-cCCcccccCCCCCEEeCcCCC------CcCcCCccccCCCC--CCEEEccc
Q 002875 173 NLSGSIPKELSNLTKLESLFLFRNQLAG-QVPWEFSRVTTLKSLDLSDNR------LSGPIPESFADLKN--LRLLSLMY 243 (872)
Q Consensus 173 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~------l~~~~~~~~~~l~~--L~~L~L~~ 243 (872)
.+.+..|..+..+ +|+.|++++|.... ..+..+..++.++.+.+.... +.......+..+.+ ++.++++.
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 8887777776655 78888888774332 123345556666555443211 12122233333333 45566666
Q ss_pred c-cCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCC
Q 002875 244 N-EMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSL 322 (872)
Q Consensus 244 n-~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~ 322 (872)
+ .+.+..|+.+..+++|+.|++++|.+. .+|..+..+ +|+.|++++|.+. .+|. .....++.+.+.+|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 6 566677788888889999999888887 577777777 8899999888886 5555 34567888888888887666
Q ss_pred CCCCCCCCCCcEEEcCCCcccccc--CccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccccCCCCCCCcCC-ccc
Q 002875 323 SPSLSNCSSLVRLRLEDNSFSGEI--PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIP-AQT 399 (872)
Q Consensus 323 ~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~~~~~-~~~ 399 (872)
+. ..+++|+.|++++|.+++.. +..+..+++|++|++++|.+.+..+. +..+++|++|++++|... +..+ ..+
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~-~~~~~~~~ 417 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLK-QMSEFSVF 417 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEE-SCTTSCTT
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccc-cccchhhh
Confidence 54 67889999999999988654 66788899999999999988865444 888899999999998543 3333 456
Q ss_pred CCCcccccccccccccCCCCCC-CCcCCccceeeccccccC-CCCCCcccccccCcEEEccCccceeccchhccCCCCCC
Q 002875 400 WSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLS-GTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLG 477 (872)
Q Consensus 400 ~~l~~L~~L~l~~~~l~~~~~~-~~~~~~l~~l~l~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 477 (872)
..+++|+.|++++|.+.+..|. +..+++|+.|+++.|.+. +.+|..+..+++|++|++++|++++..|..+..+++|+
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 7789999999999988876654 678999999999999987 67899999999999999999999999899999999999
Q ss_pred EEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCCccc-cccCC--ccccCCCCCCCCC
Q 002875 478 VLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVL-RLMGS--SAYAGNPKLCGAP 538 (872)
Q Consensus 478 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-~~~~~--~~~~~np~~c~~~ 538 (872)
+|++++|++++..|..|..+++|++|++++|++++.+|..... .|+.. ..+.+.+ .|..+
T Consensus 498 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 498 VLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred EEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 9999999999999999999999999999999999999877655 55422 2344555 66544
No 18
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.1e-49 Score=410.39 Aligned_cols=243 Identities=19% Similarity=0.212 Sum_probs=191.4
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEec----CCeeEEEEc
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYD 683 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~e 683 (872)
..++||+|+||+||+|.. .+|+.||||++.... ...+.+.+|+++|++++|||||+++++|++ ++.+|||||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 456799999999999985 679999999997532 335678999999999999999999999875 356899999
Q ss_pred ccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC-CCCeeEccccccccccccCCC
Q 002875 684 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGS 760 (872)
Q Consensus 684 y~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~-~~~~ki~dfg~~~~~~~~~~~ 760 (872)
||++|+|.+++++ ..++.....|+.||+.||+|||++ .++||||||||+|||++. ++.+||+|||+|+........
T Consensus 110 y~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~ 188 (290)
T 3fpq_A 110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccC
Confidence 9999999999975 468888999999999999999997 123999999999999984 789999999999865443333
Q ss_pred CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002875 761 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 840 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (872)
...++++|++||++.+ +++.++|||||||++|||+||+.||.+...... ....+.....+ ........+++.
T Consensus 189 ~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-----~~~~i~~~~~~--~~~~~~~~~~~~ 260 (290)
T 3fpq_A 189 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----IYRRVTSGVKP--ASFDKVAIPEVK 260 (290)
T ss_dssp ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----HHHHHTTTCCC--GGGGGCCCHHHH
T ss_pred CcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-----HHHHHHcCCCC--CCCCccCCHHHH
Confidence 3447778899998765 689999999999999999999999975432111 01111111000 000111224577
Q ss_pred HHHHHcccCCCCCCCCHHHHHHH
Q 002875 841 DVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 841 ~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+++.+||+.||++|||++|++++
T Consensus 261 ~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 261 EIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCChhHCcCHHHHhcC
Confidence 89999999999999999999875
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.2e-49 Score=418.30 Aligned_cols=242 Identities=16% Similarity=0.186 Sum_probs=192.2
Q ss_pred cchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEccc
Q 002875 610 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
|...+.||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++++++..|||||||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~ 105 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC 105 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 33889999999999999985 689999999997542 34567889999999999999999999999999999999999
Q ss_pred CCCChHHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--
Q 002875 686 PNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 759 (872)
Q Consensus 686 ~~g~L~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~-- 759 (872)
+||+|.++|... .++.+...|+.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+.......
T Consensus 106 ~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 182 (350)
T 4b9d_A 106 EGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182 (350)
T ss_dssp TTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred CCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence 999999999642 36778889999999999999999 999999999999999999999999999986543211
Q ss_pred CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002875 760 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 839 (872)
Q Consensus 760 ~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (872)
....++.+|++||++.+..++.++||||+||++|||+||+.||.+.... ..+..+......+.+. ....++
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~~~~~~~~~---~~s~~~ 253 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK------NLVLKIISGSFPPVSL---HYSYDL 253 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCCCCCT---TSCHHH
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHHcCCCCCCCc---cCCHHH
Confidence 1223677899999998888999999999999999999999999754321 1111122111111111 223467
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHH
Q 002875 840 LDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 840 ~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.+++.+||+.||++|||++|++++
T Consensus 254 ~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 254 RSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHccCChhHCcCHHHHhcC
Confidence 789999999999999999999864
No 20
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.3e-49 Score=415.12 Aligned_cols=241 Identities=17% Similarity=0.145 Sum_probs=194.6
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCCh
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 690 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L 690 (872)
..+.||+|+||+||+|+. .+|+.||||+++.... ..+|+.++++++|||||++++++.+++..|||||||+||+|
T Consensus 62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 667899999999999985 6799999999975432 24689999999999999999999999999999999999999
Q ss_pred HHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC-CeeEccccccccccccC-------CC
Q 002875 691 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLAD-------GS 760 (872)
Q Consensus 691 ~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~-~~ki~dfg~~~~~~~~~-------~~ 760 (872)
.+++++ ..++.+...|+.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+...... ..
T Consensus 138 ~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~ 214 (336)
T 4g3f_A 138 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214 (336)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------C
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCC
Confidence 999975 468889999999999999999999 999999999999999987 69999999998654321 11
Q ss_pred CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002875 761 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 840 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (872)
...++++|++||++.+..++.++||||+||++|||+||+.||.+...... +..+....+. .....+.....+.
T Consensus 215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~------~~~i~~~~~~-~~~~~~~~s~~~~ 287 (336)
T 4g3f_A 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL------CLKIASEPPP-IREIPPSCAPLTA 287 (336)
T ss_dssp CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC------HHHHHHSCCG-GGGSCTTSCHHHH
T ss_pred ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH------HHHHHcCCCC-chhcCccCCHHHH
Confidence 22467789999999888899999999999999999999999975432211 1111111100 0011122335677
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHcc
Q 002875 841 DVALLCTRSTPSDRPSMEEALKLLSG 866 (872)
Q Consensus 841 ~l~~~cl~~dp~~Rpt~~~v~~~L~~ 866 (872)
+++.+||+.||++|||++|++++|..
T Consensus 288 ~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 288 QAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 89999999999999999999988754
No 21
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.5e-48 Score=425.02 Aligned_cols=243 Identities=15% Similarity=0.239 Sum_probs=200.2
Q ss_pred chhhhccCCCCCceeeeec-CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 611 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+.+|++++|||||+++++|.+++..|||||||+||
T Consensus 154 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG 233 (423)
T 4fie_A 154 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 233 (423)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCC
Confidence 3888999999999999985 689999999997543 34567889999999999999999999999999999999999999
Q ss_pred ChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--CCcccc
Q 002875 689 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 765 (872)
Q Consensus 689 ~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--~~~~~~ 765 (872)
+|.++++. ..++.+...|+.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+....... ....++
T Consensus 234 ~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT 310 (423)
T 4fie_A 234 ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 310 (423)
T ss_dssp EHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEEC
T ss_pred cHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccC
Confidence 99999975 568888999999999999999999 999999999999999999999999999986543322 233478
Q ss_pred cccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002875 766 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 845 (872)
Q Consensus 766 ~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 845 (872)
.+|++||++....|+.++||||+||++|||+||+.||.+..... .+..+.... ............++.+++.+
T Consensus 311 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~~~~-~~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 311 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AMKMIRDNL-PPRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp TTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSC-CCCCSCTTSSCHHHHHHHHH
T ss_pred cCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHcCC-CCCCcccccCCHHHHHHHHH
Confidence 88999999988899999999999999999999999997543211 111111110 11111112234567889999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 002875 846 CTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 846 cl~~dp~~Rpt~~~v~~~ 863 (872)
||+.||++|||++|++++
T Consensus 384 ~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 384 LLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HSCSSTTTSCCHHHHTTC
T ss_pred HcCCChhHCcCHHHHhcC
Confidence 999999999999999875
No 22
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.6e-48 Score=416.40 Aligned_cols=245 Identities=21% Similarity=0.215 Sum_probs=194.2
Q ss_pred hhhhccCCCCCceeeeec------CCCcEEEEEEeeccch--hHHHHHHHHHHhhccCC-CCceeEEEEEecC-CeeEEE
Q 002875 612 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRH-KNLIRLLGFCYNR-HQAYLL 681 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~------~~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~-~~~~lv 681 (872)
..+.||+|+||+||+|.. .+++.||||+++.... ..+.+.+|+++|++++| ||||+++|+|.++ +..|||
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 778899999999999974 3457899999976432 35678999999999965 8999999999764 578999
Q ss_pred EcccCCCChHHHhhC------------------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCe
Q 002875 682 YDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 743 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~------------------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ 743 (872)
||||++|+|.++|+. ..+|.++..|+.|||+||+|||++ +||||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCCCCE
Confidence 999999999999964 247889999999999999999999 99999999999999999999
Q ss_pred eEccccccccccccCCC----CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcccccccc
Q 002875 744 HLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLG 818 (872)
Q Consensus 744 ki~dfg~~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 818 (872)
||+|||+|+........ ...++..|++||++....++.++|||||||++|||+| |+.||.+...... ....+
T Consensus 225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~--~~~~i- 301 (353)
T 4ase_A 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRL- 301 (353)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--HHHHH-
T ss_pred EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH--HHHHH-
Confidence 99999999865432221 1224556788898888899999999999999999999 7888764332111 11111
Q ss_pred ccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 819 EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
........++. ...++.+++.+||+.||++||||+|++++|+.+
T Consensus 302 --~~g~~~~~p~~---~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 302 --KEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp --HHTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HcCCCCCCCcc---CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 11111111221 234677899999999999999999999999875
No 23
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-47 Score=395.97 Aligned_cols=242 Identities=17% Similarity=0.161 Sum_probs=185.7
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 680 (872)
..|. ..+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++++++..|+
T Consensus 13 g~Y~--i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 13 GNYQ--IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp -CCE--EEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred eCeE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 3455 889999999999999985 679999999997532 235678899999999999999999999999999999
Q ss_pred EEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC
Q 002875 681 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 758 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~ 758 (872)
||||| +|+|.+++.+ ..+..+...++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 91 vmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99999 6899999865 467888899999999999999999 99999999999999999999999999997654332
Q ss_pred C-CCcccccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 759 G-SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 759 ~-~~~~~~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
. ....++++|++||++.+..+ +.++||||+||++|||+||+.||.+.... .....+.... ...+. ...
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~------~~~~~i~~~~-~~~p~---~~s 236 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNISNGV-YTLPK---FLS 236 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-CCCCT---TSC
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCC
Confidence 2 23347788999999877665 57899999999999999999999753211 1111111111 11111 123
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 837 KLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.++.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 467789999999999999999999875
No 24
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.4e-48 Score=405.57 Aligned_cols=237 Identities=18% Similarity=0.156 Sum_probs=196.3
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||+||+|+. .+|+.||||++.+.. ...+.+.+|+++|++++|||||++++++++++..|||||||+
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 889999999999999985 789999999997532 235678999999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC----CC
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----GS 760 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~----~~ 760 (872)
||+|.+++++ ..+..+...|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+...... ..
T Consensus 116 gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 192 (311)
T 4aw0_A 116 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192 (311)
T ss_dssp TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBC
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCccccc
Confidence 9999999975 467888899999999999999999 99999999999999999999999999998654322 12
Q ss_pred CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002875 761 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 840 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (872)
...|+++|++||++.+..++.++||||+||++|||+||+.||.+.... ..+..+.... ...++ ....++.
T Consensus 193 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~~~~-~~~p~---~~s~~~~ 262 (311)
T 4aw0_A 193 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG------LIFAKIIKLE-YDFPE---KFFPKAR 262 (311)
T ss_dssp CCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-CCCCT---TCCHHHH
T ss_pred CcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-CCCCc---ccCHHHH
Confidence 234778899999998888999999999999999999999999754321 1111111111 11111 1234677
Q ss_pred HHHHHcccCCCCCCCCHHHHH
Q 002875 841 DVALLCTRSTPSDRPSMEEAL 861 (872)
Q Consensus 841 ~l~~~cl~~dp~~Rpt~~~v~ 861 (872)
+++.+||+.||++|||++|+.
T Consensus 263 dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 263 DLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHHHSCSSGGGSTTSGGGT
T ss_pred HHHHHHccCCHhHCcChHHHc
Confidence 899999999999999999863
No 25
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.7e-46 Score=433.15 Aligned_cols=475 Identities=19% Similarity=0.181 Sum_probs=364.0
Q ss_pred ccCCcchhhhcCCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCcc
Q 002875 6 GALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAE 85 (872)
Q Consensus 6 ~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~ 85 (872)
+..+..+.+ ++.|++|+|++|+++++.+.+|.++++|++|+|++|.+.+..|+.|.++++|++|++++|.+++..+..
T Consensus 42 ~~~~~~~~~--l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~ 119 (570)
T 2z63_A 42 HLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFP 119 (570)
T ss_dssp EECTTTTTT--CSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCS
T ss_pred ccChhHhhC--CCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCcc
Confidence 333445566 889999999999999999999999999999999999999988899999999999999999999776668
Q ss_pred ccCCCCCCEEEccCCcccc-cCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCC----CEEEccCccCcccCCccccC
Q 002875 86 ISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV----THMEIGYNFYQGNIPWQLGN 160 (872)
Q Consensus 86 ~~~L~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L----~~L~l~~n~~~~~~p~~~~~ 160 (872)
|+++++|++|+|++|.+.+ .+|..|+++++|++|++++|.+++..+..++.+++| ..+++++|.+.+..|..+..
T Consensus 120 ~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~ 199 (570)
T 2z63_A 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE 199 (570)
T ss_dssp CTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTT
T ss_pred ccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhcc
Confidence 9999999999999999987 469999999999999999999998888889888888 89999999998887777766
Q ss_pred CCCCcEEEeecCCCc-ccCCccCcCCCCCCEEEccCCCC------cccCCcccccCCC--CCEEeCcCC-CCcCcCCccc
Q 002875 161 MSEVQYLDIAGANLS-GSIPKELSNLTKLESLFLFRNQL------AGQVPWEFSRVTT--LKSLDLSDN-RLSGPIPESF 230 (872)
Q Consensus 161 l~~L~~L~ls~n~l~-~~~p~~l~~l~~L~~L~L~~n~l------~~~~~~~~~~l~~--L~~L~L~~N-~l~~~~~~~~ 230 (872)
. +|+.|++++|... ..++..+..+++++.+.+....+ .......+..+.+ ++.++++.+ .+.+..+..+
T Consensus 200 ~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~ 278 (570)
T 2z63_A 200 I-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLF 278 (570)
T ss_dssp C-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTT
T ss_pred C-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhh
Confidence 5 7999999987543 23344555666666555432211 1122222333332 344555555 4555566666
Q ss_pred cCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeE
Q 002875 231 ADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFK 310 (872)
Q Consensus 231 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~ 310 (872)
..+++|+.|++++|.+. .+|..+..+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+..+. .....|+.
T Consensus 279 ~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~ 351 (570)
T 2z63_A 279 NCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEF 351 (570)
T ss_dssp GGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCE
T ss_pred cCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCE
Confidence 66677777777777666 355556666 6777777777666 3443 3556667777777666554443 34556677
Q ss_pred EEcCCCcCCCCC--CCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCCCCC-chhhhhcccccccccC
Q 002875 311 LILFSNNFTGSL--SPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIP-TDINQASKLEYFNVSN 387 (872)
Q Consensus 311 l~l~~n~~~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~ls~ 387 (872)
+++++|.+.+.. +..+..+++|++|++++|.+.+..+. +..+++|+.|++++|.+.+..+ ..+..+++|++|++++
T Consensus 352 L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~ 430 (570)
T 2z63_A 352 LDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 430 (570)
T ss_dssp EECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTT
T ss_pred EeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcC
Confidence 777777665443 44566778888888888888765554 7788888888888888876655 4577788888888888
Q ss_pred CCCCCCcCCcccCCCcccccccccccccC-CCCC-CCCcCCccceeeccccccCCCCCCcccccccCcEEEccCccceec
Q 002875 388 NPKLGGMIPAQTWSLPSLQNFSASACNIT-GNLP-PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGS 465 (872)
Q Consensus 388 n~~l~~~~~~~~~~l~~L~~L~l~~~~l~-~~~~-~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 465 (872)
|. +.+..|..+..+++|+.|++++|.++ +.+| .+..+++|+.|+++.|.+.+..|..+.++++|++|++++|++++.
T Consensus 431 n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 509 (570)
T 2z63_A 431 TH-TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509 (570)
T ss_dssp SC-CEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred Cc-ccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCC
Confidence 83 44455666777888888888888876 3444 467888999999999999988899999999999999999999999
Q ss_pred cchhccCCCCCCEEECCCCccccccCc
Q 002875 466 IPEVLARLPVLGVLDLSHNSLSGQIPA 492 (872)
Q Consensus 466 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 492 (872)
++..|..+++|+.|++++|.+++..|.
T Consensus 510 ~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 510 PDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CHHHhhcccCCcEEEecCCcccCCCcc
Confidence 899999999999999999999987664
No 26
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.8e-46 Score=432.74 Aligned_cols=482 Identities=18% Similarity=0.170 Sum_probs=354.9
Q ss_pred EEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCc
Q 002875 22 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 101 (872)
Q Consensus 22 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~ 101 (872)
+.|.++|.++.+ |..+. ++|++|+|++|.+.+..|.+|..+++|++|++++|.+.+..|.+|.++++|++|+|++|.
T Consensus 9 ~c~~~~~~l~~i-p~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 85 (549)
T 2z81_A 9 VCDGRSRSFTSI-PSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNH 85 (549)
T ss_dssp EEECTTSCCSSC-CSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred eEECCCCccccc-cccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCc
Confidence 356777777644 44443 677777777777777777777777777777777777777666777777777777777777
Q ss_pred ccccCCcccCCCCCCcEeeCccCcCCc-cCCccCCCCCCCCEEEccCccCcccCC-ccccCCCCCcEEEeecCCCcccCC
Q 002875 102 FSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSGSIP 179 (872)
Q Consensus 102 ~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~L~~L~~L~l~~n~~~~~~p-~~~~~l~~L~~L~ls~n~l~~~~p 179 (872)
+.+..|..|+++++|++|++++|.+++ ..|..++.+++|++|++++|...+.+| ..+.++++|++|++++|.+.+..|
T Consensus 86 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 165 (549)
T 2z81_A 86 LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQS 165 (549)
T ss_dssp CCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred cCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccCh
Confidence 776666667777777777777777765 345667777777777777776444443 567777888888888888887777
Q ss_pred ccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcC--C-ccccCCCCCCEEEcccccCCCCCC----c
Q 002875 180 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI--P-ESFADLKNLRLLSLMYNEMSGTVP----E 252 (872)
Q Consensus 180 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~-~~~~~l~~L~~L~L~~n~l~~~~p----~ 252 (872)
..+..+++|++|+++.|.+....+..+..+++|++|++++|++++.. + .....+++|+.|++++|.+.+..+ .
T Consensus 166 ~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~ 245 (549)
T 2z81_A 166 QSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLK 245 (549)
T ss_dssp TTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHG
T ss_pred hhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHH
Confidence 78888888888888877776443333456778888888888877532 1 223456778888888887765433 2
Q ss_pred cccCCCCcceeecccccccccC------CccCCCCCCCcEEecCCCeeeecC-----CCCCCCCCceeEEEcCCCcCCCC
Q 002875 253 SLVQLPSLEILFIWNNYFSGSL------PENLGRNSKLRWVDVSTNNFNGSI-----PPDICSGGVLFKLILFSNNFTGS 321 (872)
Q Consensus 253 ~l~~l~~L~~L~l~~n~l~~~~------p~~~~~~~~L~~L~ls~n~l~~~~-----p~~~~~~~~l~~l~l~~n~~~~~ 321 (872)
.+..+++|+.+++++|.+.+.. ...+..+.+++.++++++.+.... +..+.....++.+.+.+|.+. .
T Consensus 246 ~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ 324 (549)
T 2z81_A 246 LLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-L 324 (549)
T ss_dssp GGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-C
T ss_pred HhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-c
Confidence 3455677888888888776531 123455667788887777654211 000111246888888888876 4
Q ss_pred CCCCC-CCCCCCcEEEcCCCccccccC---ccCCCCCCCcEEEcCCCcCCCCCC--chhhhhcccccccccCCCCCCCcC
Q 002875 322 LSPSL-SNCSSLVRLRLEDNSFSGEIP---LKFSQLPDINYIDLSRNGFTGGIP--TDINQASKLEYFNVSNNPKLGGMI 395 (872)
Q Consensus 322 ~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~L~ls~n~~l~~~~ 395 (872)
+|..+ ..+++|+.|++++|++++..| ..+..+++|++|++++|++++..+ ..+..+++|++|++++|.. . .+
T Consensus 325 ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l-~-~l 402 (549)
T 2z81_A 325 VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF-H-PM 402 (549)
T ss_dssp CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCC-C-CC
T ss_pred CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCC-c-cC
Confidence 45444 578999999999999988764 347889999999999999986432 4577889999999999954 3 56
Q ss_pred CcccCCCcccccccccccccCCCCCCCCcCCccceeeccccccCCCCCCcccccccCcEEEccCccceeccchhccCCCC
Q 002875 396 PAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPV 475 (872)
Q Consensus 396 ~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 475 (872)
|..+..+++|+.|++++|.++...... .++|+.|++++|.+++.+ .++++|++|+|++|+++. +|. ...+++
T Consensus 403 p~~~~~~~~L~~L~Ls~N~l~~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~-ip~-~~~l~~ 474 (549)
T 2z81_A 403 PDSCQWPEKMRFLNLSSTGIRVVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLKT-LPD-ASLFPV 474 (549)
T ss_dssp CSCCCCCTTCCEEECTTSCCSCCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSS-CCC-GGGCTT
T ss_pred ChhhcccccccEEECCCCCcccccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccCc-CCC-cccCcc
Confidence 777788899999999999987432221 258999999999998753 478999999999999984 555 457899
Q ss_pred CCEEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCC
Q 002875 476 LGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG 517 (872)
Q Consensus 476 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~ 517 (872)
|++|+|++|++++..|..|..+++|++|++++|++++.+|..
T Consensus 475 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 516 (549)
T 2z81_A 475 LLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 516 (549)
T ss_dssp CCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHH
T ss_pred CCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccH
Confidence 999999999999999999999999999999999999988743
No 27
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.1e-47 Score=402.05 Aligned_cols=240 Identities=16% Similarity=0.112 Sum_probs=188.6
Q ss_pred chhhhccCCCCCceeeeec----CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEc
Q 002875 611 TECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~----~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 683 (872)
+..+.||+|+||+||+|+. .+|+.||||+++... .....+.+|+++|++++|||||++++++++++..|+|||
T Consensus 27 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE 106 (304)
T 3ubd_A 27 ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILD 106 (304)
T ss_dssp EEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEEC
T ss_pred EEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEE
Confidence 3889999999999999974 367899999997532 234467889999999999999999999999999999999
Q ss_pred ccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--C
Q 002875 684 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--G 759 (872)
Q Consensus 684 y~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~--~ 759 (872)
||+||+|.+++.+ ..++.+...++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+...... .
T Consensus 107 y~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 183 (304)
T 3ubd_A 107 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183 (304)
T ss_dssp CCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCC
T ss_pred cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccc
Confidence 9999999999976 457888899999999999999999 99999999999999999999999999997643322 2
Q ss_pred CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002875 760 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 839 (872)
Q Consensus 760 ~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (872)
....++++|++||.+.+..++.++||||+||++|||+||+.||.+..... .+..+.... ...++ ....++
T Consensus 184 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~------~~~~i~~~~-~~~p~---~~s~~~ 253 (304)
T 3ubd_A 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE------TMTMILKAK-LGMPQ---FLSPEA 253 (304)
T ss_dssp CSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCT---TSCHHH
T ss_pred cccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH------HHHHHHcCC-CCCCC---cCCHHH
Confidence 23347788999999988889999999999999999999999997543211 111111111 11111 123467
Q ss_pred HHHHHHcccCCCCCCCC-----HHHHHHH
Q 002875 840 LDVALLCTRSTPSDRPS-----MEEALKL 863 (872)
Q Consensus 840 ~~l~~~cl~~dp~~Rpt-----~~~v~~~ 863 (872)
.+++.+||+.||++||| ++|++++
T Consensus 254 ~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 254 QSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp HHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred HHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 78999999999999998 5787754
No 28
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.3e-46 Score=443.08 Aligned_cols=449 Identities=17% Similarity=0.233 Sum_probs=230.3
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCc------c------cCCccccCCCCCcEEECcCCcCccccCcc
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFS------G------HFPGGIQSLRNLLVLDAFSNSFSGSVPAE 85 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~------~------~~~~~~~~l~~L~~LdL~~n~l~~~~p~~ 85 (872)
..++.|+|++|.+++.+|.+|.+|++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 36888888888888888888888888888888888652 1 122211 23344 455555444444443
Q ss_pred ccCC-------------------CCCCEEEcc--CCcccccCCcccCCCCCCcEeeCccCcCCcc-CCccCCCCCCCCEE
Q 002875 86 ISQL-------------------EHLKVLNLA--GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ-IPAELGMLKTVTHM 143 (872)
Q Consensus 86 ~~~L-------------------~~L~~L~L~--~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~l~~L~~L~~L 143 (872)
+..+ ..++.+.+. +|.+++ +|.+|+++++|++|+|++|.+++. ++..+..
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~------- 229 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN------- 229 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC-------
T ss_pred HHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccc-------
Confidence 3310 111111111 234444 444444444444444444444432 0000000
Q ss_pred EccCccCcccCCcccc--CCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCC-Ccc-cCCcccccC------CCCC
Q 002875 144 EIGYNFYQGNIPWQLG--NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ-LAG-QVPWEFSRV------TTLK 213 (872)
Q Consensus 144 ~l~~n~~~~~~p~~~~--~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~ 213 (872)
.+.+...+.+|..++ ++++|++|++++|.+.+.+|..++.+++|++|++++|+ +++ .+|..+..+ ++|+
T Consensus 230 -~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~ 308 (636)
T 4eco_A 230 -ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQ 308 (636)
T ss_dssp -TTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCC
T ss_pred -cccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCC
Confidence 000000001444444 44444444444444444444444444444444444444 444 344444333 4455
Q ss_pred EEeCcCCCCcCcCCc--cccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCC-CcEEecC
Q 002875 214 SLDLSDNRLSGPIPE--SFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSK-LRWVDVS 290 (872)
Q Consensus 214 ~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~-L~~L~ls 290 (872)
+|++++|+++ .+|. .++.+++|+.|++++|++.+.+| .+..+++|++|++++|.++ .+|..+..+++ |+.|+++
T Consensus 309 ~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls 385 (636)
T 4eco_A 309 IIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFA 385 (636)
T ss_dssp EEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECC
T ss_pred EEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEcc
Confidence 5555555544 3444 44455555555555555544444 4444455555555555444 44444444444 5555555
Q ss_pred CCeeeecCCCCCCCCC--ceeEEEcCCCcCCCCCCCCCC-------CCCCCcEEEcCCCccccccCccCCCCCCCcEEEc
Q 002875 291 TNNFNGSIPPDICSGG--VLFKLILFSNNFTGSLSPSLS-------NCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDL 361 (872)
Q Consensus 291 ~n~l~~~~p~~~~~~~--~l~~l~l~~n~~~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 361 (872)
+|.+. .+|..+.... .|+.+++++|.+.+..|..+. .+++|+.|++++|+++...+..+..+++|++|++
T Consensus 386 ~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~L 464 (636)
T 4eco_A 386 HNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINL 464 (636)
T ss_dssp SSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEEC
T ss_pred CCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEEC
Confidence 55544 4444333322 455555555555555444444 4556666666666666433334445666666666
Q ss_pred CCCcCCCCCCch-hhhh-------cccccccccCCCCCCCcCCcccC--CCcccccccccccccCCCCCCCCcCCcccee
Q 002875 362 SRNGFTGGIPTD-INQA-------SKLEYFNVSNNPKLGGMIPAQTW--SLPSLQNFSASACNITGNLPPFKSCKSISVI 431 (872)
Q Consensus 362 s~N~l~~~~~~~-~~~l-------~~L~~L~ls~n~~l~~~~~~~~~--~l~~L~~L~l~~~~l~~~~~~~~~~~~l~~l 431 (872)
++|.++ .+|.. +... ++|++|++++|... .+|..+. .+++|+.|++++|.++
T Consensus 465 s~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~~~l~~L~~L~Ls~N~l~--------------- 526 (636)
T 4eco_A 465 MGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT--KLSDDFRATTLPYLVGIDLSYNSFS--------------- 526 (636)
T ss_dssp CSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC--BCCGGGSTTTCTTCCEEECCSSCCS---------------
T ss_pred CCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC--ccChhhhhccCCCcCEEECCCCCCC---------------
Confidence 666666 33332 2222 26666666666332 3454443 4555555555444443
Q ss_pred eccccccCCCCCCcccccccCcEEEc------cCccceeccchhccCCCCCCEEECCCCccccccCccccCCCCCcEEEC
Q 002875 432 ESHMNNLSGTIPESVSNCVELERIDL------ANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNV 505 (872)
Q Consensus 432 ~l~~n~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 505 (872)
+ +|..+.++++|++|+| ++|++.+.+|..+..+++|++|+|++|++ +.+|..+. ++|++|++
T Consensus 527 --------~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~L 594 (636)
T 4eco_A 527 --------K-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDI 594 (636)
T ss_dssp --------S-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEEC
T ss_pred --------C-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEEC
Confidence 2 4445555666666666 45666777777777777777777777777 45555544 67777777
Q ss_pred cCCeeee
Q 002875 506 SFNDISG 512 (872)
Q Consensus 506 s~N~l~~ 512 (872)
++|++..
T Consensus 595 s~N~l~~ 601 (636)
T 4eco_A 595 KDNPNIS 601 (636)
T ss_dssp CSCTTCE
T ss_pred cCCCCcc
Confidence 7777764
No 29
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.7e-46 Score=392.93 Aligned_cols=241 Identities=16% Similarity=0.202 Sum_probs=184.4
Q ss_pred hcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCC-------
Q 002875 607 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------- 676 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------- 676 (872)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 6 dy~--~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 6 DFE--PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HEE--EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hCE--EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 355 889999999999999985 689999999997543 23567889999999999999999999987543
Q ss_pred -----eeEEEEcccCCCChHHHhhCCC-----CHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEc
Q 002875 677 -----QAYLLYDYLPNGNLSEKIRTKR-----DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 746 (872)
Q Consensus 677 -----~~~lv~ey~~~g~L~~~l~~~~-----~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~ 746 (872)
..|+|||||++|+|.+++.... ++.....|+.|+++||+|||++ +|+||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 3699999999999999998643 4556778999999999999999 99999999999999999999999
Q ss_pred cccccccccccCC--------------CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcc
Q 002875 747 EFGFKYLTQLADG--------------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP 812 (872)
Q Consensus 747 dfg~~~~~~~~~~--------------~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~ 812 (872)
|||+|+....... ....|+++|++||...+..++.++||||+||++|||++ ||.....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~----- 232 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME----- 232 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-----
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-----
Confidence 9999976543211 11236778899999988899999999999999999997 6542110
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 813 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
....+..... ...++...+..+...+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~---~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 233 RVRTLTDVRN---LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHHHT---TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhc---CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0001111111 11122334444567789999999999999999999874
No 30
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.2e-45 Score=437.02 Aligned_cols=447 Identities=19% Similarity=0.216 Sum_probs=242.3
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEEC-cCCcCcccCCcccc---------------------------------
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDI-SRNNFSGHFPGGIQ--------------------------------- 63 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L-s~N~i~~~~~~~~~--------------------------------- 63 (872)
..++.|+|++|.+++.+|.+|.+|++|++|+| ++|.+.+..|-...
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46899999999999999999999999999999 88887665321100
Q ss_pred ------------------CCCCCcEEECc--CCcCccccCccccCCCCCCEEEccCCcccc-----------------cC
Q 002875 64 ------------------SLRNLLVLDAF--SNSFSGSVPAEISQLEHLKVLNLAGSYFSG-----------------PI 106 (872)
Q Consensus 64 ------------------~l~~L~~LdL~--~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~-----------------~~ 106 (872)
....++.+.+. .|.+++ +|..|+++++|++|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 00111111111 244444 45555555555555555555554 14
Q ss_pred CcccC--CCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCcc-Ccc-cCCccccCCCCCcEEEeecCCCcccCCccC
Q 002875 107 PSQFG--SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNF-YQG-NIPWQLGNMSEVQYLDIAGANLSGSIPKEL 182 (872)
Q Consensus 107 p~~~~--~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~-~~~-~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l 182 (872)
|..++ ++++|++|+|++|.+.+.+|..++.+++|+.|++++|. +.+ .+|..+++++ ..+
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~-----------------~~~ 544 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA-----------------DDE 544 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHH-----------------HCT
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhh-----------------hcc
Confidence 44444 44445555554444444444444444444444444443 443 3443333222 011
Q ss_pred cCCCCCCEEEccCCCCcccCCc--ccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCC-
Q 002875 183 SNLTKLESLFLFRNQLAGQVPW--EFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS- 259 (872)
Q Consensus 183 ~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~- 259 (872)
..+++|+.|++++|.+. .+|. .|..+++|+.|+|++|+++ .+| .|+.+++|+.|++++|++. .+|..+..+++
T Consensus 545 ~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~ 620 (876)
T 4ecn_A 545 DTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQ 620 (876)
T ss_dssp TTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTT
T ss_pred cccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhcccc
Confidence 11225555555555555 3444 4555555555555555554 344 4555555555555555554 44444555555
Q ss_pred cceeecccccccccCCccCCCCCC--CcEEecCCCeeeecCCCCC-----CCCCceeEEEcCCCcCCCCCCCCCCCCCCC
Q 002875 260 LEILFIWNNYFSGSLPENLGRNSK--LRWVDVSTNNFNGSIPPDI-----CSGGVLFKLILFSNNFTGSLSPSLSNCSSL 332 (872)
Q Consensus 260 L~~L~l~~n~l~~~~p~~~~~~~~--L~~L~ls~n~l~~~~p~~~-----~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L 332 (872)
|+.|++++|.+. .+|..+..... |+.|++++|.+.+.+|... +....|+.|++++|.+....+..+..+++|
T Consensus 621 L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L 699 (876)
T 4ecn_A 621 VEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPI 699 (876)
T ss_dssp CCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCC
T ss_pred CCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCC
Confidence 555555555554 34444443332 5555555555544333211 122356666666666653222223466777
Q ss_pred cEEEcCCCccccccCccCCCC-------CCCcEEEcCCCcCCCCCCchhh--hhcccccccccCCCCCCCcCCcccCCCc
Q 002875 333 VRLRLEDNSFSGEIPLKFSQL-------PDINYIDLSRNGFTGGIPTDIN--QASKLEYFNVSNNPKLGGMIPAQTWSLP 403 (872)
Q Consensus 333 ~~L~L~~N~l~~~~~~~~~~l-------~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~ls~n~~l~~~~~~~~~~l~ 403 (872)
+.|++++|+++...+..+... ++|+.|+|++|+++ .+|..+. .+++|+.|++++|... + +|..+..++
T Consensus 700 ~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~-~-lp~~l~~L~ 776 (876)
T 4ecn_A 700 STIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFS-S-FPTQPLNSS 776 (876)
T ss_dssp SEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCS-S-CCCGGGGCT
T ss_pred CEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCC-c-cchhhhcCC
Confidence 777777777763322233222 26777777777777 5666655 6667777777776332 2 455555555
Q ss_pred ccccccccccccCCCCCCCCcCCccceeeccccccCCCCCCcccccccCcEEEccCccceeccchhccCCCCCCEEECCC
Q 002875 404 SLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSH 483 (872)
Q Consensus 404 ~L~~L~l~~~~l~~~~~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 483 (872)
+|+.|++++|. +++.|.+.+.+|..+.++++|++|+|++|++ +.+|..+. ++|+.|||++
T Consensus 777 ~L~~L~Ls~N~-----------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~ 836 (876)
T 4ecn_A 777 QLKAFGIRHQR-----------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIAD 836 (876)
T ss_dssp TCCEEECCCCB-----------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCS
T ss_pred CCCEEECCCCC-----------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCC
Confidence 55555555543 2344566666777777777777777777777 45555543 5677777777
Q ss_pred CccccccCccccCCCCCcEEECcCCee
Q 002875 484 NSLSGQIPAKFGSCSSLTVLNVSFNDI 510 (872)
Q Consensus 484 N~l~~~~~~~~~~l~~L~~L~ls~N~l 510 (872)
|++....+..|.....+..+.+.+|++
T Consensus 837 N~l~~i~~~~~~~~~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 837 NPNISIDVTSVCPYIEAGMYVLLYDKT 863 (876)
T ss_dssp CTTCEEECGGGHHHHHTTCCEEECCTT
T ss_pred CCCCccChHHccccccchheeecCCCc
Confidence 777666555554443444444444443
No 31
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.4e-45 Score=424.32 Aligned_cols=457 Identities=18% Similarity=0.171 Sum_probs=340.7
Q ss_pred cEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCC
Q 002875 21 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 100 (872)
Q Consensus 21 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n 100 (872)
++||+++|.++. +|..+. ++|++|+|++|.+.+..|+.|..+++|++|++++|.+++..|..|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 579999999985 566666 89999999999999888889999999999999999999888899999999999999999
Q ss_pred cccccCCcccCCCCCCcEeeCccCcCCc-cCCccCCCCCCCCEEEccCccCcccCCccccCCCCC--cEEEeecCCC--c
Q 002875 101 YFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV--QYLDIAGANL--S 175 (872)
Q Consensus 101 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L--~~L~ls~n~l--~ 175 (872)
.+.. +|.. .+++|++|+|++|.+++ .+|..++.+++|++|++++|.+.+ ..+..+++| +.|++++|.+ .
T Consensus 80 ~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred ceee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 9984 5555 89999999999999987 467889999999999999988765 345667777 9999999988 7
Q ss_pred ccCCccCcCCC-CCCEEEccCCCCcccCC-cccccCCCCCEEeCcCCC-------CcCcCCccccCCCCCCEEEcccccC
Q 002875 176 GSIPKELSNLT-KLESLFLFRNQLAGQVP-WEFSRVTTLKSLDLSDNR-------LSGPIPESFADLKNLRLLSLMYNEM 246 (872)
Q Consensus 176 ~~~p~~l~~l~-~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~L~~n~l 246 (872)
+..|..+..++ +...++++.|.+.+..+ ..+..+++|+.|++++|. +.+.+| .++.+++|+.|+++.|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 77787777665 23356777787766444 356778888888888886 554444 677888888888888877
Q ss_pred CCCCCcccc---CCCCcceeecccccccccCCccC-----CCCCCCcEEecCCCeeeecCCC-CCC---CCCceeEEEcC
Q 002875 247 SGTVPESLV---QLPSLEILFIWNNYFSGSLPENL-----GRNSKLRWVDVSTNNFNGSIPP-DIC---SGGVLFKLILF 314 (872)
Q Consensus 247 ~~~~p~~l~---~l~~L~~L~l~~n~l~~~~p~~~-----~~~~~L~~L~ls~n~l~~~~p~-~~~---~~~~l~~l~l~ 314 (872)
.+..+..+. ..++|++|++++|.+.|.+|..+ ..++.|+.+++++|.+ .+|. .++ ....++.+.+.
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 653222211 23578888888888887788777 7777888888887777 4442 111 11346677777
Q ss_pred CCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCC--CCCchhhhhcccccccccCCCCCC
Q 002875 315 SNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTG--GIPTDINQASKLEYFNVSNNPKLG 392 (872)
Q Consensus 315 ~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~ls~n~~l~ 392 (872)
+|.+.... .+..+++|++|++++|++++..|..+..+++|++|++++|++.+ .+|..+..+++|++|++++|
T Consensus 311 ~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N---- 384 (520)
T 2z7x_B 311 GTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQN---- 384 (520)
T ss_dssp SSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSS----
T ss_pred CCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCC----
Confidence 77665432 12466777777777777777667777777777777777777764 33445556666666666666
Q ss_pred CcCCcccCCCcccccccccccccCCCCC--CCCcCCccceeeccccccCCCCCCcccccccCcEEEccCccceeccchhc
Q 002875 393 GMIPAQTWSLPSLQNFSASACNITGNLP--PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVL 470 (872)
Q Consensus 393 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~--~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 470 (872)
.+++.+| .+..+++|+.++++.|.+++..|..+. ++|++|++++|+++ .+|..+
T Consensus 385 ---------------------~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 385 ---------------------SVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp ---------------------CCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGG
T ss_pred ---------------------cCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhh
Confidence 3333222 134455666666666666655555443 78999999999999 566666
Q ss_pred cCCCCCCEEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCCcc
Q 002875 471 ARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKV 519 (872)
Q Consensus 471 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 519 (872)
..+++|++|++++|++++..+..|..+++|++|++++|++++.++..+.
T Consensus 441 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 489 (520)
T 2z7x_B 441 VKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 489 (520)
T ss_dssp GGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHH
T ss_pred hcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCchHH
Confidence 6999999999999999966555699999999999999999987775444
No 32
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.8e-45 Score=430.46 Aligned_cols=461 Identities=19% Similarity=0.263 Sum_probs=352.7
Q ss_pred CCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCc------c------ccCccccCCCCCCEEEccCCcccccCCcc
Q 002875 42 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS------G------SVPAEISQLEHLKVLNLAGSYFSGPIPSQ 109 (872)
Q Consensus 42 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~------~------~~p~~~~~L~~L~~L~L~~n~~~~~~p~~ 109 (872)
.+++.|+|++|.+.|.+|.+|+.|++|++|||++|.+. + .+|... +..|+ +++++|.+.+..|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 36777777777777777777777777777777777541 1 222222 34455 566666665555554
Q ss_pred cCC-CCCCcEeeCccCcCCccCCccCCCCCCCCEEEcc--CccCcccCCccccCCCCCcEEEeecCCCccc---------
Q 002875 110 FGS-FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIG--YNFYQGNIPWQLGNMSEVQYLDIAGANLSGS--------- 177 (872)
Q Consensus 110 ~~~-l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~--~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~--------- 177 (872)
+.. +..+..+++....+.. .....++.+.++ .|.+.+ +|..++++++|++|++++|.+++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 442 2223333333222211 111222222332 466777 888999999999999999999986
Q ss_pred --------CCccCc--CCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCC-CcC-cCCccccCC------CCCCEE
Q 002875 178 --------IPKELS--NLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR-LSG-PIPESFADL------KNLRLL 239 (872)
Q Consensus 178 --------~p~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l------~~L~~L 239 (872)
+|..++ .+++|++|++++|.+.+.+|..|.++++|++|++++|+ +++ .+|..++.+ ++|+.|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 899998 99999999999999999999999999999999999998 887 788888776 899999
Q ss_pred EcccccCCCCCCc--cccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCc-eeEEEcCCC
Q 002875 240 SLMYNEMSGTVPE--SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGV-LFKLILFSN 316 (872)
Q Consensus 240 ~L~~n~l~~~~p~--~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~-l~~l~l~~n 316 (872)
++++|+++ .+|. .+..+++|++|++++|.+.|.+| .+..+++|+.|++++|.+. .+|..+..... |+.|++++|
T Consensus 311 ~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N 387 (636)
T 4eco_A 311 YIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHN 387 (636)
T ss_dssp ECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSS
T ss_pred ECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCC
Confidence 99999999 7887 89999999999999999998899 8888999999999999998 78888888888 889999998
Q ss_pred cCCCCCCCCCCCCC--CCcEEEcCCCccccccCccCC-------CCCCCcEEEcCCCcCCCCCCchhhhhcccccccccC
Q 002875 317 NFTGSLSPSLSNCS--SLVRLRLEDNSFSGEIPLKFS-------QLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSN 387 (872)
Q Consensus 317 ~~~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~ 387 (872)
.+. .+|..+..++ +|+.|++++|.+++..|..+. .+++|++|++++|.+....+..+..+++|++|++++
T Consensus 388 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~ 466 (636)
T 4eco_A 388 KLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMG 466 (636)
T ss_dssp CCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCS
T ss_pred cCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCC
Confidence 888 6677776654 888999999998888888777 778888899998888854444455678888888888
Q ss_pred CCCCCCcCCcccCCCcccccccccccccCCCCCCCCcCCccceeeccccccCCCCCCccc--ccccCcEEEccCccceec
Q 002875 388 NPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVS--NCVELERIDLANNKLIGS 465 (872)
Q Consensus 388 n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~l~~l~l~~n~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~ 465 (872)
|... .+|...+... .+....+++|+.|+++.|.+. .+|..+. .+++|++|+|++|++++
T Consensus 467 N~l~--~i~~~~~~~~---------------~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~- 527 (636)
T 4eco_A 467 NMLT--EIPKNSLKDE---------------NENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK- 527 (636)
T ss_dssp SCCS--BCCSSSSEET---------------TEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-
T ss_pred CCCC--CcCHHHhccc---------------cccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-
Confidence 8432 3332221100 011233447788888888887 6787776 99999999999999998
Q ss_pred cchhccCCCCCCEEEC------CCCccccccCccccCCCCCcEEECcCCeeeecCCCCccccccCCccccCCCCCCCC
Q 002875 466 IPEVLARLPVLGVLDL------SHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGA 537 (872)
Q Consensus 466 ~~~~~~~l~~L~~L~L------s~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~np~~c~~ 537 (872)
+|..+..+++|++|+| ++|++.+.+|..+..+++|++|++++|++ +.+|.. ....+....+.+||..|-.
T Consensus 528 ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 528 FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEE
T ss_pred cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcccc
Confidence 7888899999999999 56888999999999999999999999999 678865 3356677788999988743
No 33
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.9e-45 Score=424.24 Aligned_cols=470 Identities=18% Similarity=0.159 Sum_probs=392.2
Q ss_pred cCCcchhhhcCCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccc
Q 002875 7 ALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEI 86 (872)
Q Consensus 7 ~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~ 86 (872)
+||... .+.|++|+|++|+++++.|.+|.++++|++|+|++|.+.+..|++|..+++|++||+++|.+.+..|..|
T Consensus 19 ~ip~~~----~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 94 (549)
T 2z81_A 19 SIPSGL----TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWF 94 (549)
T ss_dssp SCCSCC----CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHH
T ss_pred cccccC----CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHh
Confidence 456543 4689999999999999999999999999999999999999999999999999999999999998888789
Q ss_pred cCCCCCCEEEccCCcccc-cCCcccCCCCCCcEeeCccCc-CCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCC
Q 002875 87 SQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNL-LNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV 164 (872)
Q Consensus 87 ~~L~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L 164 (872)
+++++|++|+|++|.+.+ ..|..|+++++|++|++++|. +....+..++.+++|++|++++|.+.+..|..+.++++|
T Consensus 95 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 174 (549)
T 2z81_A 95 GPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDI 174 (549)
T ss_dssp TTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEE
T ss_pred ccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccC
Confidence 999999999999999986 357789999999999999998 444445789999999999999999999999999999999
Q ss_pred cEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccC--C-cccccCCCCCEEeCcCCCCcCcCC----ccccCCCCCC
Q 002875 165 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV--P-WEFSRVTTLKSLDLSDNRLSGPIP----ESFADLKNLR 237 (872)
Q Consensus 165 ~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~--~-~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~ 237 (872)
++|++++|.+.......+..+++|++|++++|++.+.. | .....+++|+.|++++|.+++..+ ..+..+++|+
T Consensus 175 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~ 254 (549)
T 2z81_A 175 HHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELS 254 (549)
T ss_dssp EEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCC
T ss_pred ceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccc
Confidence 99999999986433333467899999999999998752 1 223567899999999999876433 3456788999
Q ss_pred EEEcccccCCCCC------CccccCCCCcceeecccccccccC-----CccCCCCCCCcEEecCCCeeeecCCCCCC-CC
Q 002875 238 LLSLMYNEMSGTV------PESLVQLPSLEILFIWNNYFSGSL-----PENLGRNSKLRWVDVSTNNFNGSIPPDIC-SG 305 (872)
Q Consensus 238 ~L~L~~n~l~~~~------p~~l~~l~~L~~L~l~~n~l~~~~-----p~~~~~~~~L~~L~ls~n~l~~~~p~~~~-~~ 305 (872)
.+++++|.+.+.. ...+..+++|+.|++.++.+.... +..+....+|+.|++++|.+. .+|..++ ..
T Consensus 255 ~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l 333 (549)
T 2z81_A 255 EVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHL 333 (549)
T ss_dssp EEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHC
T ss_pred ccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcC
Confidence 9999999876531 134567789999999888765321 111223467999999999986 6776653 57
Q ss_pred CceeEEEcCCCcCCCCCC---CCCCCCCCCcEEEcCCCccccccC--ccCCCCCCCcEEEcCCCcCCCCCCchhhhhccc
Q 002875 306 GVLFKLILFSNNFTGSLS---PSLSNCSSLVRLRLEDNSFSGEIP--LKFSQLPDINYIDLSRNGFTGGIPTDINQASKL 380 (872)
Q Consensus 306 ~~l~~l~l~~n~~~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 380 (872)
..|+.|++++|++.+..+ ..++.+++|+.|++++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|
T Consensus 334 ~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L 412 (549)
T 2z81_A 334 KSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKM 412 (549)
T ss_dssp TTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTC
T ss_pred ccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccc
Confidence 889999999999987653 347889999999999999986543 45888999999999999998 578888889999
Q ss_pred ccccccCCCCCCCcCCcccCCCcccccccccccccCCCCCCCCcCCccceeeccccccCCCCCCcccccccCcEEEccCc
Q 002875 381 EYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANN 460 (872)
Q Consensus 381 ~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N 460 (872)
++|++++|.. . .+|... .++|+.|++++|.+++.. ..+++|+.|++++|.++ .+|. ...+++|++|+|++|
T Consensus 413 ~~L~Ls~N~l-~-~l~~~~--~~~L~~L~Ls~N~l~~~~---~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N 483 (549)
T 2z81_A 413 RFLNLSSTGI-R-VVKTCI--PQTLEVLDVSNNNLDSFS---LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRN 483 (549)
T ss_dssp CEEECTTSCC-S-CCCTTS--CTTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSS
T ss_pred cEEECCCCCc-c-cccchh--cCCceEEECCCCChhhhc---ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCC
Confidence 9999999953 2 233332 268999999999998753 47889999999999998 6676 567999999999999
Q ss_pred cceeccchhccCCCCCCEEECCCCccccccC
Q 002875 461 KLIGSIPEVLARLPVLGVLDLSHNSLSGQIP 491 (872)
Q Consensus 461 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 491 (872)
++++.+|..+..+++|+.|++++|.+.+..|
T Consensus 484 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 484 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred ccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 9999999999999999999999999987665
No 34
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.6e-43 Score=415.51 Aligned_cols=513 Identities=19% Similarity=0.166 Sum_probs=353.7
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEc
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 97 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L 97 (872)
+.+++|||++|+|+++.+.+|.++++|++|+|++|+|+++.|++|+++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36888888888888888888888888888888888888877888888888888888888888766677888888888888
Q ss_pred cCCcccccCCcccCCCCCCcEeeCccCcCCc-cCCccCCCCCCCCEEEccCccCcccCCccccCCCCC----cEEEeecC
Q 002875 98 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV----QYLDIAGA 172 (872)
Q Consensus 98 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L----~~L~ls~n 172 (872)
++|.+++..+..|+++++|++|+|++|.++. ..|..++.+++|++|++++|.+.+..+..+..+.++ ..++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 8888887777778888888888888888865 356777888888888888888877767666554433 35777788
Q ss_pred CCcccCCccCcCCCCCCEEEccCCCCcc-cCCcccccCCCCCEEeCcCC------CCcCcCCccccCCCCCCEEEccccc
Q 002875 173 NLSGSIPKELSNLTKLESLFLFRNQLAG-QVPWEFSRVTTLKSLDLSDN------RLSGPIPESFADLKNLRLLSLMYNE 245 (872)
Q Consensus 173 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N------~l~~~~~~~~~~l~~L~~L~L~~n~ 245 (872)
.+....+..+. ...++.+++..|.... ..+..+..+..++...+..+ .+.......+..+..+....+..+.
T Consensus 212 ~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 77755444443 3456677777765442 22233555666665544322 1222233344455555555555444
Q ss_pred CCCC---CCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCC
Q 002875 246 MSGT---VPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSL 322 (872)
Q Consensus 246 l~~~---~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~ 322 (872)
.... .+..+..+.+++.+.+.++.+.... .+.....++.|++++|.+.+..+. ....+..+.+..|......
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~ 365 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF 365 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC
T ss_pred hcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc
Confidence 3321 2233445567777777777665432 244456778888888877543222 2345666777776655432
Q ss_pred CCCCCCCCCCcEEEcCCCcccc--ccCccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccccCCCCCCCcCCcccC
Q 002875 323 SPSLSNCSSLVRLRLEDNSFSG--EIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTW 400 (872)
Q Consensus 323 ~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~~~~~~~~~ 400 (872)
....+++|+.|++++|.+.. ..+..+..+.+|++++++.|.... .+..+..+++|+.++++.|.......+..+.
T Consensus 366 --~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~ 442 (635)
T 4g8a_A 366 --SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFL 442 (635)
T ss_dssp --CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTT
T ss_pred --ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccc
Confidence 34467788888888887753 334455567778888888777653 3445666778888888777554444444556
Q ss_pred CCcccccccccccccCCCCCC-CCcCCccceeecccccc-CCCCCCcccccccCcEEEccCccceeccchhccCCCCCCE
Q 002875 401 SLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNL-SGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGV 478 (872)
Q Consensus 401 ~l~~L~~L~l~~~~l~~~~~~-~~~~~~l~~l~l~~n~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 478 (872)
.+++++.++++.|.+.+..+. +..++.++.++++.|.+ .+..|..|..+++|++|+|++|++++..|..|.++++|++
T Consensus 443 ~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~ 522 (635)
T 4g8a_A 443 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 522 (635)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCE
Confidence 677788888888877665543 46677788888887764 4456777888888888888888888888888888888888
Q ss_pred EECCCCccccccCccccCCCCCcEEECcCCeeeecCCCCc--cccccCCccccCCCCCCCCCC
Q 002875 479 LDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGK--VLRLMGSSAYAGNPKLCGAPL 539 (872)
Q Consensus 479 L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~~~~~~~~~~np~~c~~~l 539 (872)
|+|++|+|++..|..|..+++|++|++++|+|++..|..- ....+....+.+||+.|+|.+
T Consensus 523 L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 523 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp EECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred EECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 8888888888888888888888888888888887655431 113345566788888887653
No 35
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.8e-43 Score=422.00 Aligned_cols=463 Identities=17% Similarity=0.176 Sum_probs=333.8
Q ss_pred CCCCEEECcCCcCcccCCccccCCCCCcEEEC-cCCcCccccCccccCCC-CCCE-----EEc----------cCCcccc
Q 002875 42 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDA-FSNSFSGSVPAEISQLE-HLKV-----LNL----------AGSYFSG 104 (872)
Q Consensus 42 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL-~~n~l~~~~p~~~~~L~-~L~~-----L~L----------~~n~~~~ 104 (872)
.+++.|+|++|.+.+.+|.+|+.|++|++||| ++|.+.+..|....... .+.. +.. ....+..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57889999999999999999999999999999 88877765332211000 0000 000 0000000
Q ss_pred -----------cCCcccCCCCCCcEeeCcc--CcCCccCCccCCCCCCCCEEEccCccCcc-----------------cC
Q 002875 105 -----------PIPSQFGSFKSLEFLHLAG--NLLNDQIPAELGMLKTVTHMEIGYNFYQG-----------------NI 154 (872)
Q Consensus 105 -----------~~p~~~~~l~~L~~L~L~~--n~l~~~~p~~l~~L~~L~~L~l~~n~~~~-----------------~~ 154 (872)
..+........++.+.+.. |.+++ +|..++.+++|+.|++++|.+.+ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0000011112222222222 44444 44445555555555555555444 58
Q ss_pred Ccccc--CCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCC-Ccc-cCCcccccCC-------CCCEEeCcCCCCc
Q 002875 155 PWQLG--NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ-LAG-QVPWEFSRVT-------TLKSLDLSDNRLS 223 (872)
Q Consensus 155 p~~~~--~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~l~-------~L~~L~L~~N~l~ 223 (872)
|..++ ++++|++|++++|++.+.+|..+..+++|+.|+|++|+ +++ .+|..+..++ +|++|++++|.++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 88877 99999999999999999999999999999999999998 887 6777666555 9999999999999
Q ss_pred CcCCc--cccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCC-CcEEecCCCeeeecCCC
Q 002875 224 GPIPE--SFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSK-LRWVDVSTNNFNGSIPP 300 (872)
Q Consensus 224 ~~~~~--~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~-L~~L~ls~n~l~~~~p~ 300 (872)
.+|. .++.+++|+.|++++|++. .+| .+..+++|+.|++++|.+. .+|..+..+++ |+.|++++|.+. .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 7888 8999999999999999999 777 8999999999999999999 88988999999 999999999998 7887
Q ss_pred CCCCCCc--eeEEEcCCCcCCCCCCCC---CC--CCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCCCCCch
Q 002875 301 DICSGGV--LFKLILFSNNFTGSLSPS---LS--NCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTD 373 (872)
Q Consensus 301 ~~~~~~~--l~~l~l~~n~~~~~~~~~---~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 373 (872)
.+..... |+.|.+++|.+.+.+|.. +. .+++|+.|++++|.++...+..+..+++|+.|++++|++. .+|..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~ 715 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPEN 715 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChH
Confidence 7766544 999999999999876532 22 3458999999999999544444568999999999999999 55544
Q ss_pred hhh--------hcccccccccCCCCCCCcCCcccCCCcccccccccccccCCCCCCCCcCCccceeeccccccCCCCCCc
Q 002875 374 INQ--------ASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPES 445 (872)
Q Consensus 374 ~~~--------l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~l~~l~l~~n~l~~~~p~~ 445 (872)
+.. +++|+.|++++|... .+|..+. ...+++|+.|+++.|.+.+ +|..
T Consensus 716 ~~~~~~~~l~nl~~L~~L~Ls~N~L~--~lp~~l~---------------------~~~l~~L~~L~Ls~N~L~~-lp~~ 771 (876)
T 4ecn_A 716 SLKPKDGNYKNTYLLTTIDLRFNKLT--SLSDDFR---------------------ATTLPYLSNMDVSYNCFSS-FPTQ 771 (876)
T ss_dssp SSSCTTSCCTTGGGCCEEECCSSCCC--CCCGGGS---------------------TTTCTTCCEEECCSSCCSS-CCCG
T ss_pred HhccccccccccCCccEEECCCCCCc--cchHHhh---------------------hccCCCcCEEEeCCCCCCc-cchh
Confidence 322 236777777777332 3444433 0134455555555556655 5777
Q ss_pred ccccccCcEEEccC------ccceeccchhccCCCCCCEEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCCcc
Q 002875 446 VSNCVELERIDLAN------NKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKV 519 (872)
Q Consensus 446 ~~~l~~L~~L~Ls~------N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 519 (872)
+.++++|+.|+|++ |++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|++++|++...-+....
T Consensus 772 l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~ 848 (876)
T 4ecn_A 772 PLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVC 848 (876)
T ss_dssp GGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGH
T ss_pred hhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHcc
Confidence 77888888888866 888999999999999999999999999 67777765 6999999999999754432211
Q ss_pred c-cccCCccccCCCCCC--CCC
Q 002875 520 L-RLMGSSAYAGNPKLC--GAP 538 (872)
Q Consensus 520 ~-~~~~~~~~~~np~~c--~~~ 538 (872)
. .......+.+|+..+ +|+
T Consensus 849 ~~~~~~~~~L~~n~~~~I~gC~ 870 (876)
T 4ecn_A 849 PYIEAGMYVLLYDKTQDIRGCD 870 (876)
T ss_dssp HHHHTTCCEEECCTTSEEESCG
T ss_pred ccccchheeecCCCccccCCCC
Confidence 1 112334455555444 543
No 36
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.2e-43 Score=403.06 Aligned_cols=452 Identities=19% Similarity=0.238 Sum_probs=360.1
Q ss_pred CEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccC
Q 002875 45 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 124 (872)
Q Consensus 45 ~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 124 (872)
++||+++|.++. +|..+. ++|++||+++|.+.+..|.+|.++++|++|+|++|.+.+..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 589999999984 666665 89999999999999888889999999999999999999988999999999999999999
Q ss_pred cCCccCCccCCCCCCCCEEEccCccCcc-cCCccccCCCCCcEEEeecCCCcccCCccCcCCCCC--CEEEccCCCC--c
Q 002875 125 LLNDQIPAELGMLKTVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKL--ESLFLFRNQL--A 199 (872)
Q Consensus 125 ~l~~~~p~~l~~L~~L~~L~l~~n~~~~-~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L--~~L~L~~n~l--~ 199 (872)
.++. +|.. .+++|++|++++|.+.+ .+|..++++++|++|++++|.+.+ ..+..+++| +.|++++|.+ .
T Consensus 80 ~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred ceee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 9984 5555 89999999999999987 578999999999999999999986 456677777 9999999999 7
Q ss_pred ccCCcccccCC-CCCEEeCcCCCCcCcCC-ccccCCCCCCEEEccccc-------CCCCCCccccCCCCcceeecccccc
Q 002875 200 GQVPWEFSRVT-TLKSLDLSDNRLSGPIP-ESFADLKNLRLLSLMYNE-------MSGTVPESLVQLPSLEILFIWNNYF 270 (872)
Q Consensus 200 ~~~~~~~~~l~-~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~-------l~~~~p~~l~~l~~L~~L~l~~n~l 270 (872)
+..|..+..+. ....+++++|.+.+.++ ..+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 77777776665 23357888888876554 467889999999999987 555554 688899999999999888
Q ss_pred cccCCccCC---CCCCCcEEecCCCeeeecCCCCC-----CCCCceeEEEcCCCcCCCCCC-CCCCCC---CCCcEEEcC
Q 002875 271 SGSLPENLG---RNSKLRWVDVSTNNFNGSIPPDI-----CSGGVLFKLILFSNNFTGSLS-PSLSNC---SSLVRLRLE 338 (872)
Q Consensus 271 ~~~~p~~~~---~~~~L~~L~ls~n~l~~~~p~~~-----~~~~~l~~l~l~~n~~~~~~~-~~~~~l---~~L~~L~L~ 338 (872)
++..+..+. ..++|+.|++++|.+.|.+|..+ ..+..|+.+.+..|.+ .+| ..+..+ .+|+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 754322111 13589999999999998899887 6677788888888877 333 233333 568888888
Q ss_pred CCccccccCccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccccCCCCCCCcCCcccCCCcccccccccccccCC-
Q 002875 339 DNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITG- 417 (872)
Q Consensus 339 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~- 417 (872)
+|.+.... .+..+++|++|++++|++.+.+|..+..+++|++|++++|. +++
T Consensus 311 ~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~-------------------------l~~l 363 (520)
T 2z7x_B 311 GTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQ-------------------------LKEL 363 (520)
T ss_dssp SSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSC-------------------------CCBH
T ss_pred CCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCc-------------------------cCcc
Confidence 88775432 12567788888888888877777777777777777777763 221
Q ss_pred -CCC-CCCcCCccceeeccccccCCCCCC-cccccccCcEEEccCccceeccchhccCCCCCCEEECCCCccccccCccc
Q 002875 418 -NLP-PFKSCKSISVIESHMNNLSGTIPE-SVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKF 494 (872)
Q Consensus 418 -~~~-~~~~~~~l~~l~l~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 494 (872)
.+| .+..+++|+.|+++.|.+.+.+|. .+..+++|++|++++|++++..|..+. +.|++|++++|+++ .+|..+
T Consensus 364 ~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 364 SKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp HHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGG
T ss_pred ccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhh
Confidence 111 135677899999999999986665 488899999999999999988877664 79999999999999 667766
Q ss_pred cCCCCCcEEECcCCeeeecCCCCc--cccccCCccccCCCCCCCCCC
Q 002875 495 GSCSSLTVLNVSFNDISGSIPSGK--VLRLMGSSAYAGNPKLCGAPL 539 (872)
Q Consensus 495 ~~l~~L~~L~ls~N~l~~~~p~~~--~~~~~~~~~~~~np~~c~~~l 539 (872)
..+++|++|++++|+++ .+|... ....+....+.+||..|+|++
T Consensus 441 ~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 441 VKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp GGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred hcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 69999999999999999 466542 234456667899999998653
No 37
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.7e-43 Score=382.88 Aligned_cols=249 Identities=19% Similarity=0.212 Sum_probs=190.4
Q ss_pred chhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEec------CCeeEE
Q 002875 611 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN------RHQAYL 680 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~~~l 680 (872)
...+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.. .+..||
T Consensus 57 ~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~i 136 (398)
T 4b99_A 57 EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYV 136 (398)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEE
Confidence 3889999999999999985 689999999997532 235567889999999999999999999864 357899
Q ss_pred EEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc-
Q 002875 681 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA- 757 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~- 757 (872)
|||||+ |+|.+++.. ..++.+...|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 137 vmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~ 212 (398)
T 4b99_A 137 VLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212 (398)
T ss_dssp EEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC----
T ss_pred EEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecccCc
Confidence 999996 789999976 357888999999999999999999 9999999999999999999999999999754321
Q ss_pred -----CCCCcccccccCchhhhccc-CCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc-----------------
Q 002875 758 -----DGSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------------- 814 (872)
Q Consensus 758 -----~~~~~~~~~~~~~~e~~~~~-~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~----------------- 814 (872)
......++.+|++||++.+. .++.++||||+||++|||+||+.||.+..........
T Consensus 213 ~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~ 292 (398)
T 4b99_A 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 292 (398)
T ss_dssp ---CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC----
T ss_pred cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhh
Confidence 11223477889999987654 5688999999999999999999999754321100000
Q ss_pred ccccccccccccCCCCchH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 815 GLLGEMYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
..........+...+..+. ....++.+++.+||+.||++|||++|+++|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 293 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000000011111 123567899999999999999999999875
No 38
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.6e-43 Score=379.78 Aligned_cols=194 Identities=14% Similarity=0.155 Sum_probs=164.4
Q ss_pred hhcCcchhhhccCCCCCceeeeec----CCCcEEEEEEeeccchhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~----~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 680 (872)
+.|. ..+.||+|+||+||+|+. .+++.||||++.... ....+.+|+++|+++ +|||||++++++.++++.|+
T Consensus 21 ~~Y~--i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l 97 (361)
T 4f9c_A 21 NVFK--IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI 97 (361)
T ss_dssp GTCE--EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred CcEE--EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence 4455 889999999999999974 467899999987543 344567899999988 69999999999999999999
Q ss_pred EEcccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC-CCeeEccccccccccccC-
Q 002875 681 LYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLAD- 758 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~-~~~ki~dfg~~~~~~~~~- 758 (872)
|||||++|+|.++++ ..++.+...++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+......
T Consensus 98 vmE~~~g~~L~~~~~-~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 98 AMPYLEHESFLDILN-SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp EEECCCCCCHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred EEeCCCcccHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 999999999999985 578889999999999999999999 99999999999999876 799999999997432211
Q ss_pred -----------------------------CCCcccccccCchhhhccc-CCcccccchhHHHHHHHHHcCCCCCCCCC
Q 002875 759 -----------------------------GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGS 806 (872)
Q Consensus 759 -----------------------------~~~~~~~~~~~~~e~~~~~-~~~~~~Dv~S~Gvil~el~tg~~p~~~~~ 806 (872)
.....++++|++||+..+. .++.++||||+||++|||+||+.||..+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 0112367889999987654 58899999999999999999999997654
No 39
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1e-42 Score=395.36 Aligned_cols=244 Identities=11% Similarity=0.060 Sum_probs=193.7
Q ss_pred cCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch----hHHHHH---HHHHHhhccCCCCceeEEEEEecCCeeE
Q 002875 608 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVS---EFITRIGTVRHKNLIRLLGFCYNRHQAY 679 (872)
Q Consensus 608 ~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~----~~~~~~---~e~~~l~~l~H~niv~l~~~~~~~~~~~ 679 (872)
|. ..+.||+|+||+||+|.. .+|+.||||++++... ...... .++.+++.++|||||++++++++++..|
T Consensus 191 f~--i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 191 FS--VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp EE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred eE--EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 55 889999999999999985 6899999999975321 122233 3466777889999999999999999999
Q ss_pred EEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc
Q 002875 680 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 680 lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~ 757 (872)
+|||||+||+|.++|.+ ..+..+...|+.||+.||+|||++ +||||||||+||||+.+|.+||+|||+|+.....
T Consensus 269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 99999999999999975 457888889999999999999999 9999999999999999999999999999876554
Q ss_pred CCCCcccccccCchhhhc-ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 758 DGSFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 758 ~~~~~~~~~~~~~~e~~~-~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
......|+++|++||++. +..++.++||||+||++|||+||..||.+....... .......... ...+. ...
T Consensus 346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~---~i~~~i~~~~-~~~p~---~~S 418 (689)
T 3v5w_A 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRMTLTMA-VELPD---SFS 418 (689)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH---HHHHHHHHCC-CCCCT---TSC
T ss_pred CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHhhcCCC-CCCCc---cCC
Confidence 444556788899999885 457899999999999999999999999753321110 1111111111 11111 233
Q ss_pred HHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002875 837 KLVLDVALLCTRSTPSDRPS-----MEEALKL 863 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt-----~~~v~~~ 863 (872)
.++.+++.+||+.||++|++ ++|+.+|
T Consensus 419 ~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 56789999999999999998 6887654
No 40
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.1e-41 Score=394.55 Aligned_cols=461 Identities=18% Similarity=0.171 Sum_probs=306.0
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
..+.+++++|.+++ +|..+. ++|++|+|++|.|.+..|++|..+++|++|++++|.+++..|..|.++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 44788999999886 455554 788999999999888877888999999999999999888888888889999999999
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCcc-CCccCCCCCCCCEEEccCccCcccCCccccCCCCC--cEEEeecCCC-
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV--QYLDIAGANL- 174 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L--~~L~ls~n~l- 174 (872)
+|.++. +|.. .+++|++|+|++|.+++. .|..++.+++|++|++++|.+.+. .+..+++| +.|++++|.+
T Consensus 109 ~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 109 HNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp TSCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CCcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 998884 5655 788999999999988763 457788888888888888877653 33444444 8888888887
Q ss_pred -cccCCccCcCCC--CCCEEEccCCCCcccCCc-ccccCCCCCEEeCcCCCCc----CcCCccccCCCCCCEEEcccccC
Q 002875 175 -SGSIPKELSNLT--KLESLFLFRNQLAGQVPW-EFSRVTTLKSLDLSDNRLS----GPIPESFADLKNLRLLSLMYNEM 246 (872)
Q Consensus 175 -~~~~p~~l~~l~--~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L~~n~l 246 (872)
.+..|..+..+. .+ .++++.|.+.+..+. .+..+++|+.+++++|+.. ......+..+++|+.|+++.+.+
T Consensus 183 ~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 183 IKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEE
T ss_pred ccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcC
Confidence 777777776654 22 456677776654443 3556677777777777421 01123456677777777776665
Q ss_pred CCCC----CccccCCCCcceeecccccccccCCccC-----CCCCCCcEEecCCCeeeecCCCC-C---CCCCceeEEEc
Q 002875 247 SGTV----PESLVQLPSLEILFIWNNYFSGSLPENL-----GRNSKLRWVDVSTNNFNGSIPPD-I---CSGGVLFKLIL 313 (872)
Q Consensus 247 ~~~~----p~~l~~l~~L~~L~l~~n~l~~~~p~~~-----~~~~~L~~L~ls~n~l~~~~p~~-~---~~~~~l~~l~l 313 (872)
.+.. +.. ...++|++|++++|.+.|.+|..+ ..+..|+.++++.|.+ .+|.. + +....++.+.+
T Consensus 262 ~~~~~~~~~~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l 338 (562)
T 3a79_B 262 TWKCSVKLFQF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSI 338 (562)
T ss_dssp CHHHHHHHHHH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEE
T ss_pred cHHHHHHHHHh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEc
Confidence 4321 111 123477777777777776666665 4444444445444443 22211 0 01123555555
Q ss_pred CCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccccCCCCCCC
Q 002875 314 FSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGG 393 (872)
Q Consensus 314 ~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~~ 393 (872)
.+|.+..... ...+++|++|++++|++++..|..+..+++|++|++++|++++..
T Consensus 339 ~~n~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----------------------- 393 (562)
T 3a79_B 339 SDTPFIHMVC--PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF----------------------- 393 (562)
T ss_dssp ESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT-----------------------
T ss_pred cCCCcccccC--ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc-----------------------
Confidence 5555432211 134555555555555555555555555555555555555555321
Q ss_pred cCCcccCCCcccccccccccccCCCCCC--CCcCCccceeeccccccCCCCCCcccccccCcEEEccCccceeccchhcc
Q 002875 394 MIPAQTWSLPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLA 471 (872)
Q Consensus 394 ~~~~~~~~l~~L~~L~l~~~~l~~~~~~--~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 471 (872)
..|..+..+++|+.|++++|.+++.+|. +..+++|+.++++.|.+++.+|..+. ++|++|++++|+++. +|..+.
T Consensus 394 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~ 470 (562)
T 3a79_B 394 KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVT 470 (562)
T ss_dssp HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTT
T ss_pred cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cChhhc
Confidence 1122233444555555555555443332 45566777777777777666665543 689999999999984 555555
Q ss_pred CCCCCCEEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCCccc
Q 002875 472 RLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVL 520 (872)
Q Consensus 472 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 520 (872)
.+++|++|+|++|++++..+..|..+++|+.|++++|++++.++..+..
T Consensus 471 ~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~ 519 (562)
T 3a79_B 471 HLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYL 519 (562)
T ss_dssp SSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHHHH
T ss_pred CCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHHHH
Confidence 9999999999999999665555999999999999999999887765543
No 41
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.2e-42 Score=397.50 Aligned_cols=249 Identities=19% Similarity=0.237 Sum_probs=201.1
Q ss_pred HHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEE
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 681 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 681 (872)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++++++..|||
T Consensus 155 il~~Y~--i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 155 VLDHYD--IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred CccccE--EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 445565 889999999999999985 689999999997643 3466788999999999999999999999999999999
Q ss_pred EcccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC--CCeeEccccccccccc
Q 002875 682 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN--MEPHLAEFGFKYLTQL 756 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~--~~~ki~dfg~~~~~~~ 756 (872)
||||+||+|.+++.. ..++.+...++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+++....
T Consensus 233 ~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp EECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred EeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 999999999999964 346788899999999999999999 99999999999999854 7899999999986543
Q ss_pred cCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002875 757 ADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 835 (872)
Q Consensus 757 ~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (872)
... ....++.+|++||++.+..++.++||||+||++|||++|..||.+..... .+..+.........+.....
T Consensus 310 ~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~ 383 (573)
T 3uto_A 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE------TLRNVKSCDWNMDDSAFSGI 383 (573)
T ss_dssp TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCCCCCSGGGTTS
T ss_pred CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHhCCCCCCcccccCC
Confidence 322 12346778999999998899999999999999999999999997543211 11111111101111112233
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 836 IKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 836 ~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
..++.+++.+||+.||++|||++|+++|
T Consensus 384 s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 384 SEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 4567899999999999999999999985
No 42
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.7e-40 Score=392.49 Aligned_cols=502 Identities=19% Similarity=0.164 Sum_probs=346.1
Q ss_pred cchhhhcCCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCC
Q 002875 10 GKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQL 89 (872)
Q Consensus 10 ~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L 89 (872)
..+.+ ++.|++|+|++|+|+++.+.+|.++++|++|+|++|+|++..++.|.++++|++|+|++|.+++..+..|+++
T Consensus 70 ~~f~~--l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L 147 (635)
T 4g8a_A 70 YSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHL 147 (635)
T ss_dssp TTTTT--CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTC
T ss_pred HHHhC--CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcC
Confidence 35666 8999999999999999999999999999999999999998888899999999999999999998777889999
Q ss_pred CCCCEEEccCCcccc-cCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCC----CEEEccCccCcccCCccccCCCCC
Q 002875 90 EHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV----THMEIGYNFYQGNIPWQLGNMSEV 164 (872)
Q Consensus 90 ~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L----~~L~l~~n~~~~~~p~~~~~l~~L 164 (872)
++|++|+|++|.+.. ..|..++.+++|++|+|++|.+++..+..+..+.++ ..++++.|.+....+.. .....+
T Consensus 148 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~-~~~~~~ 226 (635)
T 4g8a_A 148 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA-FKEIRL 226 (635)
T ss_dssp TTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTT-TTTCEE
T ss_pred cccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCccc-ccchhh
Confidence 999999999999976 468889999999999999999999888888766554 36788888776544433 334456
Q ss_pred cEEEeecCCCcc-cCCccCcCCCCCCEEEccCCC------CcccCCcccccCCCCCEEeCcCCCCcC---cCCccccCCC
Q 002875 165 QYLDIAGANLSG-SIPKELSNLTKLESLFLFRNQ------LAGQVPWEFSRVTTLKSLDLSDNRLSG---PIPESFADLK 234 (872)
Q Consensus 165 ~~L~ls~n~l~~-~~p~~l~~l~~L~~L~L~~n~------l~~~~~~~~~~l~~L~~L~L~~N~l~~---~~~~~~~~l~ 234 (872)
+.+++.+|.... ..+..+..+..++...+..+. +.......+..+..+...++..+.... .....+..+.
T Consensus 227 ~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 306 (635)
T 4g8a_A 227 HKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLT 306 (635)
T ss_dssp EEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGT
T ss_pred hhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhc
Confidence 778888776542 223345556666655543222 111222233334444444433322211 1223344455
Q ss_pred CCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcC
Q 002875 235 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 314 (872)
Q Consensus 235 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~ 314 (872)
+++.+.+..+.+.... .+....+|+.|++.+|.+.+..+. .+..|+.++++.|..... ......+.++.+.++
T Consensus 307 ~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls 379 (635)
T 4g8a_A 307 NVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLS 379 (635)
T ss_dssp TCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECC
T ss_pred cccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhh
Confidence 5555555555544321 233445555666665555433222 233455555555544321 122234455555555
Q ss_pred CCcCCC--CCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCCCCC-chhhhhcccccccccCCCCC
Q 002875 315 SNNFTG--SLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIP-TDINQASKLEYFNVSNNPKL 391 (872)
Q Consensus 315 ~n~~~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~ls~n~~l 391 (872)
.|.+.. ..+..+..+.+|+.|++..|.+.. .+..+..+++|+.++++.|+.....+ ..+..+.+++.+++++| .+
T Consensus 380 ~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n-~l 457 (635)
T 4g8a_A 380 RNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT-HT 457 (635)
T ss_dssp SSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTS-CC
T ss_pred ccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccccccc-cc
Confidence 555432 223334455666666666666553 33455666666666666665544433 34555666666666666 33
Q ss_pred CCcCCcccCCCcccccccccccccCCC-CC-CCCcCCccceeeccccccCCCCCCcccccccCcEEEccCccceeccchh
Q 002875 392 GGMIPAQTWSLPSLQNFSASACNITGN-LP-PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEV 469 (872)
Q Consensus 392 ~~~~~~~~~~l~~L~~L~l~~~~l~~~-~~-~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 469 (872)
....+..+..+++++.|++++|..... .| .+..+++|+.|+++.|.+.+..|..|.++++|++|+|++|++++..|..
T Consensus 458 ~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~ 537 (635)
T 4g8a_A 458 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFP 537 (635)
T ss_dssp EECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGG
T ss_pred ccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhH
Confidence 344455555566677777776654332 22 3567788888888889998888999999999999999999999999999
Q ss_pred ccCCCCCCEEECCCCccccccCccccCC-CCCcEEECcCCeeeecCCCCcccccc
Q 002875 470 LARLPVLGVLDLSHNSLSGQIPAKFGSC-SSLTVLNVSFNDISGSIPSGKVLRLM 523 (872)
Q Consensus 470 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~ls~N~l~~~~p~~~~~~~~ 523 (872)
|..+++|++|||++|+|++..|..|..+ ++|++|++++|++++.+...++..|+
T Consensus 538 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl 592 (635)
T 4g8a_A 538 YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWI 592 (635)
T ss_dssp GTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHH
T ss_pred HhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHH
Confidence 9999999999999999999999999988 68999999999999988765555554
No 43
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=379.76 Aligned_cols=456 Identities=20% Similarity=0.254 Sum_probs=338.7
Q ss_pred CCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEe
Q 002875 40 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 119 (872)
Q Consensus 40 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L 119 (872)
.....+++++++|.+++ +|..+. ++|++||+++|.+.+..|.+|.++++|++|+|++|.+++..|+.|+++++|++|
T Consensus 29 ~~~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 105 (562)
T 3a79_B 29 SNELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYL 105 (562)
T ss_dssp ----CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEE
Confidence 34455899999999986 665553 899999999999998888899999999999999999999989999999999999
Q ss_pred eCccCcCCccCCccCCCCCCCCEEEccCccCcc-cCCccccCCCCCcEEEeecCCCcccCCccCcCCCCC--CEEEccCC
Q 002875 120 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKL--ESLFLFRN 196 (872)
Q Consensus 120 ~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~-~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L--~~L~L~~n 196 (872)
+|++|.++. +|.. .+++|++|++++|.+.+ .+|..++++++|++|++++|.+.+. .+..+++| +.|+++.|
T Consensus 106 ~Ls~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n 179 (562)
T 3a79_B 106 DVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLV 179 (562)
T ss_dssp ECTTSCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEES
T ss_pred ECCCCcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecc
Confidence 999999984 5555 89999999999999887 4578899999999999999999864 34455555 99999999
Q ss_pred CC--cccCCcccccCC-CCCEEeCcCCCCcCcCCc-cccCCCCCCEEEcccccCC----CCCCccccCCCCcceeecccc
Q 002875 197 QL--AGQVPWEFSRVT-TLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYNEMS----GTVPESLVQLPSLEILFIWNN 268 (872)
Q Consensus 197 ~l--~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~----~~~p~~l~~l~~L~~L~l~~n 268 (872)
.+ .+..|..+..+. ..-.+++++|.+.+.++. .+..+++|+.+++++|+.. ......+..+++|+.|++.++
T Consensus 180 ~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~ 259 (562)
T 3a79_B 180 SYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHI 259 (562)
T ss_dssp SCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEE
T ss_pred cccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCC
Confidence 99 888888777765 112568888888775543 5678899999999988521 012235677888888888887
Q ss_pred ccccc----CCccCCCCCCCcEEecCCCeeeecCCCCC-----CCCCceeEEEcCCCcCCCCCC-CCCCC---CCCCcEE
Q 002875 269 YFSGS----LPENLGRNSKLRWVDVSTNNFNGSIPPDI-----CSGGVLFKLILFSNNFTGSLS-PSLSN---CSSLVRL 335 (872)
Q Consensus 269 ~l~~~----~p~~~~~~~~L~~L~ls~n~l~~~~p~~~-----~~~~~l~~l~l~~n~~~~~~~-~~~~~---l~~L~~L 335 (872)
.+.+. .+..+ ...+|++|++++|.+.|.+|..+ ..+..|..+.+..+.+ .+| ..+.. ..+|+.|
T Consensus 260 ~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L 336 (562)
T 3a79_B 260 ETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKML 336 (562)
T ss_dssp EECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEE
T ss_pred cCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEE
Confidence 76542 12222 23478999999999988888776 3344444444444444 222 11111 1457777
Q ss_pred EcCCCccccccCccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccccCCCCCCCcCCcccCCCccccccccccccc
Q 002875 336 RLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNI 415 (872)
Q Consensus 336 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l 415 (872)
++++|.+.... ....+++|++|++++|.+.+.+|..+..+++|++|++++| .+
T Consensus 337 ~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N-------------------------~l 389 (562)
T 3a79_B 337 SISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRN-------------------------GL 389 (562)
T ss_dssp EEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSS-------------------------CC
T ss_pred EccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCC-------------------------Cc
Confidence 77777664321 1155667777777777766655555555555555555555 44
Q ss_pred CCCC--C-CCCcCCccceeeccccccCCCCCC-cccccccCcEEEccCccceeccchhccCCCCCCEEECCCCccccccC
Q 002875 416 TGNL--P-PFKSCKSISVIESHMNNLSGTIPE-SVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIP 491 (872)
Q Consensus 416 ~~~~--~-~~~~~~~l~~l~l~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 491 (872)
++.. | .+..+++|+.++++.|.+.+.+|. .+..+++|++|++++|++++..|..+. ++|++|+|++|+++. +|
T Consensus 390 ~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip 466 (562)
T 3a79_B 390 KNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IP 466 (562)
T ss_dssp CBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CC
T ss_pred CCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cC
Confidence 4311 1 367788999999999999985664 588999999999999999887776554 799999999999995 55
Q ss_pred ccccCCCCCcEEECcCCeeeecCCCC--ccccccCCccccCCCCCCCCC
Q 002875 492 AKFGSCSSLTVLNVSFNDISGSIPSG--KVLRLMGSSAYAGNPKLCGAP 538 (872)
Q Consensus 492 ~~~~~l~~L~~L~ls~N~l~~~~p~~--~~~~~~~~~~~~~np~~c~~~ 538 (872)
..+..+++|++|++++|+++ .+|.. .....+....+.+||+.|+|+
T Consensus 467 ~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 467 KDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred hhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 55559999999999999999 46654 233455667789999999865
No 44
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.9e-40 Score=353.49 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=207.2
Q ss_pred HHhhcCcchhhhccCCCCCceeeeecCCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEE
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 682 (872)
..+.|. ..+.||+|+||.||+|+..+|+.||||++.... ...+.+.+|++++++++|||||+++++|.+.+..++||
T Consensus 37 ~~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (321)
T 2qkw_B 37 ATNNFD--HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY 114 (321)
T ss_dssp CCCCCS--CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEE
T ss_pred HHhccC--ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 334455 888999999999999999899999999987543 34667899999999999999999999999999999999
Q ss_pred cccCCCChHHHhhCC------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccc
Q 002875 683 DYLPNGNLSEKIRTK------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 756 (872)
Q Consensus 683 ey~~~g~L~~~l~~~------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~ 756 (872)
||+++|+|.+++... .++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 191 (321)
T 2qkw_B 115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTE 191 (321)
T ss_dssp ECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSS
T ss_pred EcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 999999999999652 57899999999999999999999 999999999999999999999999999875432
Q ss_pred cCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc---------ccccccccc
Q 002875 757 ADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID---------GLLGEMYNE 823 (872)
Q Consensus 757 ~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~---------~~~~~~~~~ 823 (872)
... ....++..|.+||......++.++|||||||++|||+||+.||............ ..+.+..++
T Consensus 192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (321)
T 2qkw_B 192 LDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDP 271 (321)
T ss_dssp SSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSS
T ss_pred ccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcCh
Confidence 211 1122456688889887778899999999999999999999998754432211100 111122222
Q ss_pred cccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 824 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
... .....+....+.+++.+||+.||++|||++|++++|+.+
T Consensus 272 ~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 272 NLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp SCT--TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhc--cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 111 122356677889999999999999999999999999765
No 45
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.8e-40 Score=355.07 Aligned_cols=259 Identities=30% Similarity=0.517 Sum_probs=206.0
Q ss_pred hhcCcchhhhccCCCCCceeeeecCCCcEEEEEEeeccch--hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEc
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 683 (872)
+.|. ..+.||+|+||.||+|...+|+.||||++..... ....+.+|++++++++|||||+++++|.+++..++|||
T Consensus 30 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 107 (326)
T 3uim_A 30 DNFS--NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 107 (326)
T ss_dssp TSSC--STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEE
T ss_pred hccc--cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEE
Confidence 3455 8899999999999999998999999999975432 23468899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhCC------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc
Q 002875 684 YLPNGNLSEKIRTK------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 684 y~~~g~L~~~l~~~------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~ 757 (872)
|+++|+|.+++... .++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 187 (326)
T 3uim_A 108 YMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187 (326)
T ss_dssp CCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSS
T ss_pred eccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcc
Confidence 99999999999753 578899999999999999999988889999999999999999999999999999765332
Q ss_pred CCC---CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCC--CCccc---------cccccccccc
Q 002875 758 DGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL--QNKPI---------DGLLGEMYNE 823 (872)
Q Consensus 758 ~~~---~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~--~~~~~---------~~~~~~~~~~ 823 (872)
... ...++..|.+||...+..++.++||||+||++|||+||+.||...... ..... ........+.
T Consensus 188 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (326)
T 3uim_A 188 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 267 (326)
T ss_dssp SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCT
T ss_pred cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcCh
Confidence 221 122556688889887778899999999999999999999998621100 00000 0111111111
Q ss_pred cccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 824 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
.. ......+....+.+++.+||+.||++|||++|++++|++..
T Consensus 268 ~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 268 DL--QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp TC--TTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hh--ccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 11 12233566778999999999999999999999999997654
No 46
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.5e-40 Score=356.76 Aligned_cols=259 Identities=17% Similarity=0.247 Sum_probs=199.4
Q ss_pred cchhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCC----eeEEEEccc
Q 002875 610 STECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYL 685 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lv~ey~ 685 (872)
|...+.||+|+||.||+|+.. |+.||||++...........+|+.++++++|||||++++++.+.. ..++|||||
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~ 104 (322)
T 3soc_A 26 LQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFH 104 (322)
T ss_dssp EEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred chhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecC
Confidence 348899999999999999874 899999999866555666777899999999999999999998743 479999999
Q ss_pred CCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhC-------CCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc
Q 002875 686 PNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHD-------CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 686 ~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~-------~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~ 757 (872)
++|+|.++++. ..++.++..++.|+++||+|||+. +.++|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~ 184 (322)
T 3soc_A 105 EKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184 (322)
T ss_dssp TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTT
T ss_pred CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccc
Confidence 99999999976 468999999999999999999986 2458999999999999999999999999999754332
Q ss_pred CC----CCcccccccCchhhhcc-----cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccc---------cc-
Q 002875 758 DG----SFPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGL---------LG- 818 (872)
Q Consensus 758 ~~----~~~~~~~~~~~~e~~~~-----~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~---------~~- 818 (872)
.. ....++..|.+||...+ ..++.++|||||||++|||+||+.||.........+.... ..
T Consensus 185 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (322)
T 3soc_A 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQE 264 (322)
T ss_dssp SCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHH
T ss_pred cCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhh
Confidence 21 11234566788887765 3456778999999999999999999875433221111100 00
Q ss_pred ccccccccCC-CC--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 819 EMYNENEVGS-SS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 819 ~~~~~~~~~~-~~--~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
........+. .. .......++.+++.+||+.||++|||++|+++.|+.++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 265 VVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0000100000 11 112345668899999999999999999999999988754
No 47
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7.2e-39 Score=363.66 Aligned_cols=392 Identities=18% Similarity=0.137 Sum_probs=257.4
Q ss_pred CEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCccccc-CCcccCCCCCCcEeeCcc
Q 002875 45 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP-IPSQFGSFKSLEFLHLAG 123 (872)
Q Consensus 45 ~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~-~p~~~~~l~~L~~L~L~~ 123 (872)
+.++.+++.++. +|. + .++|++|||++|.+++..|..|.++++|++|+|++|.+.+. .|..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~~-lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLHQ-VPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCSS-CCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCccc-CCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 456777777763 444 2 26788888888888877777888888888888888877643 356788888888888888
Q ss_pred CcCCccCCccCCCCCCCCEEEccCccCcccCCcc--ccCCCCCcEEEeecCCCcccCCcc-CcCCCCCCEEEccCCCCcc
Q 002875 124 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ--LGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLAG 200 (872)
Q Consensus 124 n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~--~~~l~~L~~L~ls~n~l~~~~p~~-l~~l~~L~~L~L~~n~l~~ 200 (872)
|.+++..|..++.+++|++|++++|.+.+.+|.. +.++++|++|++++|.+.+..|.. +..+++|++|++++|.+.+
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 8887766777777777776666666665533332 555556666666666555554443 4555555555555555555
Q ss_pred cCCcccccC--CCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccC
Q 002875 201 QVPWEFSRV--TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 278 (872)
Q Consensus 201 ~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~ 278 (872)
..+..+..+ .+|+.|++++|.+.+..+..++. .....+..+++|++|++++|.+.+..|..+
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 232 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRF 232 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHH
T ss_pred cChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhh
Confidence 555444443 34555555555554332222110 000012234455555555555555444433
Q ss_pred CC---CCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCC--CCCCCcEEEcCCCccccccCccCCCC
Q 002875 279 GR---NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLS--NCSSLVRLRLEDNSFSGEIPLKFSQL 353 (872)
Q Consensus 279 ~~---~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l 353 (872)
.. ..+++.|++++|...+... ..+.+....+..+. ..++|+.|++++|.+++..|..|..+
T Consensus 233 ~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 298 (455)
T 3v47_A 233 FDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHF 298 (455)
T ss_dssp HHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTC
T ss_pred hccccccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccC
Confidence 22 2455666666554432110 11111112222222 23678888888888888888888888
Q ss_pred CCCcEEEcCCCcCCCCCCchhhhhcccccccccCCCCCCCcCCcccCCCcccccccccccccCCCCCCCCcCCccceeec
Q 002875 354 PDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIES 433 (872)
Q Consensus 354 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~l~~l~l 433 (872)
++|++|++++|.+.+..|..+..+++|++|++++|
T Consensus 299 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N--------------------------------------------- 333 (455)
T 3v47_A 299 TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN--------------------------------------------- 333 (455)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS---------------------------------------------
T ss_pred CCCCEEECCCCcccccChhHhcCcccCCEEECCCC---------------------------------------------
Confidence 88888888888887666666666666666666555
Q ss_pred cccccCCCCCCcccccccCcEEEccCccceeccchhccCCCCCCEEECCCCccccccCccccCCCCCcEEECcCCeeeec
Q 002875 434 HMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGS 513 (872)
Q Consensus 434 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 513 (872)
.+.+..|..+.++++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|++|++++|++++.
T Consensus 334 ---~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 334 ---FLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp ---CCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ---ccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 22223455677889999999999999999999999999999999999999998888899999999999999999999
Q ss_pred CCCCc
Q 002875 514 IPSGK 518 (872)
Q Consensus 514 ~p~~~ 518 (872)
+|...
T Consensus 411 ~~~~~ 415 (455)
T 3v47_A 411 CPRID 415 (455)
T ss_dssp TTTTH
T ss_pred CCcch
Confidence 98654
No 48
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.8e-40 Score=349.39 Aligned_cols=246 Identities=15% Similarity=0.228 Sum_probs=197.8
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEc
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 683 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++.+.+..|+|||
T Consensus 20 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 20 KKYT--RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GTBC--CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcee--eeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 4455 889999999999999984 789999999997543 345678899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhCC-CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC--
Q 002875 684 YLPNGNLSEKIRTK-RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 760 (872)
Q Consensus 684 y~~~g~L~~~l~~~-~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~-- 760 (872)
|+++|+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 98 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp CCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 99999999999764 68888999999999999999999 9999999999999999999999999998754432221
Q ss_pred CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002875 761 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 840 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (872)
...++..|.+||...+..++.++||||+||++|||+||+.||.......... ...... .............+.
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~ 247 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY------LIATNG-TPELQNPEKLSAIFR 247 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHHHHC-SCCCSCGGGSCHHHH
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHhCC-CCCCCCccccCHHHH
Confidence 2235666888999888889999999999999999999999987543211000 000000 000111122334677
Q ss_pred HHHHHcccCCCCCCCCHHHHHHH
Q 002875 841 DVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 841 ~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+++.+||+.||++|||++|++++
T Consensus 248 ~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 248 DFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHccCChhHCcCHHHHhhC
Confidence 89999999999999999999864
No 49
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=9.6e-40 Score=342.82 Aligned_cols=249 Identities=17% Similarity=0.246 Sum_probs=200.3
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCChH
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 691 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L~ 691 (872)
..+.||+|+||.||+|...++..||||++.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 78899999999999999988999999999876666778899999999999999999999999999999999999999999
Q ss_pred HHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC---Ccccc
Q 002875 692 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FPAKI 765 (872)
Q Consensus 692 ~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~---~~~~~ 765 (872)
+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...+.
T Consensus 92 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 168 (268)
T 3sxs_A 92 NYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP 168 (268)
T ss_dssp HHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCC
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcC
Confidence 99975 368899999999999999999999 9999999999999999999999999998754332211 11123
Q ss_pred cccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002875 766 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 844 (872)
Q Consensus 766 ~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 844 (872)
..|.+||...+..++.++||||+||++|||+| |+.||........ ............+.. ....+.+++.
T Consensus 169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~---~~~~l~~li~ 239 (268)
T 3sxs_A 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV------VLKVSQGHRLYRPHL---ASDTIYQIMY 239 (268)
T ss_dssp GGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH------HHHHHTTCCCCCCTT---SCHHHHHHHH
T ss_pred cccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH------HHHHHcCCCCCCCCc---ChHHHHHHHH
Confidence 34778888887788899999999999999999 7777754321110 001111110111111 1245778999
Q ss_pred HcccCCCCCCCCHHHHHHHHcccCCCCC
Q 002875 845 LCTRSTPSDRPSMEEALKLLSGLKPHGK 872 (872)
Q Consensus 845 ~cl~~dp~~Rpt~~~v~~~L~~~~~~~~ 872 (872)
.||+.||++|||++|++++|+.+++..|
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~~k 267 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREKDK 267 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence 9999999999999999999999987654
No 50
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-40 Score=355.25 Aligned_cols=247 Identities=17% Similarity=0.195 Sum_probs=198.8
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcc
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 684 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 684 (872)
+.|. ..+.||+|+||.||+|+. .+|+.||+|.+.......+.+.+|+.++++++|||||++++++.+.+..++||||
T Consensus 5 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 5 EKYM--IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hceE--eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4455 888999999999999986 5789999999987666677789999999999999999999999999999999999
Q ss_pred cCCCChHHHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC--CCCeeEccccccccccccCC
Q 002875 685 LPNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQLADG 759 (872)
Q Consensus 685 ~~~g~L~~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~--~~~~ki~dfg~~~~~~~~~~ 759 (872)
|++|+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999999753 57888999999999999999999 9999999999999987 78999999999976543221
Q ss_pred -CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002875 760 -SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 760 -~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
....++++|.+||...+..++.++||||+||++|||+||..||....... ....+.........+.......+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~s~~ 233 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ------IIENIMNAEYTFDEEAFKEISIE 233 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCCCCCHHHHTTSCHH
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH------HHHHHHcCCCCCChhhhccCCHH
Confidence 11225566888898887778899999999999999999999987543211 11111111101001111223456
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 839 VLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 234 AMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcC
Confidence 8899999999999999999999875
No 51
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1e-39 Score=351.50 Aligned_cols=239 Identities=17% Similarity=0.201 Sum_probs=193.1
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..|+||||+++
T Consensus 19 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 98 (328)
T 3fe3_A 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98 (328)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCC
Confidence 889999999999999986 789999999997532 2355678899999999999999999999999999999999999
Q ss_pred CChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-CCccc
Q 002875 688 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPAK 764 (872)
Q Consensus 688 g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~-~~~~~ 764 (872)
|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 99 ~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~g 175 (328)
T 3fe3_A 99 GEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG 175 (328)
T ss_dssp CBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSS
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccC
Confidence 999999854 567888899999999999999999 999999999999999999999999999875433221 12235
Q ss_pred ccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 843 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 843 (872)
+.+|.+||...+..+ +.++||||+||++|||+||+.||.+..... ....+.... ...+. ....++.+++
T Consensus 176 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~-~~~p~---~~s~~~~~li 245 (328)
T 3fe3_A 176 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE------LRERVLRGK-YRIPF---YMSTDCENLL 245 (328)
T ss_dssp SGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCT---TSCHHHHHHH
T ss_pred CcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCC---CCCHHHHHHH
Confidence 667888898876665 478999999999999999999987543111 111111111 00111 1234577899
Q ss_pred HHcccCCCCCCCCHHHHHHH
Q 002875 844 LLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 844 ~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.+||+.||++|||++|++++
T Consensus 246 ~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 246 KRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHCCSSTTTSCCHHHHTTC
T ss_pred HHHCCCChhHCcCHHHHhcC
Confidence 99999999999999999875
No 52
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=345.87 Aligned_cols=247 Identities=18% Similarity=0.261 Sum_probs=197.9
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeecc-chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG-ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 689 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~ 689 (872)
..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++.+++..++||||+++|+
T Consensus 14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred ccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 788999999999999986 57999999988643 3456788999999999999999999999999999999999999999
Q ss_pred hHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC------
Q 002875 690 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS------ 760 (872)
Q Consensus 690 L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~------ 760 (872)
|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 94 L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 170 (310)
T 3s95_A 94 LRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170 (310)
T ss_dssp HHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-----------
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccccccc
Confidence 9999975 458899999999999999999999 9999999999999999999999999998754322111
Q ss_pred ----------CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002875 761 ----------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 830 (872)
Q Consensus 761 ----------~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (872)
...++..|.+||...+..++.++|||||||++|||+||..|+........... ........... ++
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~ 246 (310)
T 3s95_A 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG-LNVRGFLDRYC---PP 246 (310)
T ss_dssp ---------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS-BCHHHHHHHTC---CT
T ss_pred ccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh-hhhhccccccC---CC
Confidence 12355668889998888889999999999999999999988764332211110 00111111100 00
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 831 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 831 ~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
.....+.+++.+||+.||++|||++|+++.|+.++
T Consensus 247 ---~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 247 ---NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp ---TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11235778899999999999999999999998764
No 53
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.1e-39 Score=355.48 Aligned_cols=251 Identities=19% Similarity=0.165 Sum_probs=199.5
Q ss_pred hhHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch-------hHHHHHHHHHHhhccCCCCceeEEEEEe
Q 002875 602 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCY 673 (872)
Q Consensus 602 ~~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~~~~~ 673 (872)
.++.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|+.++++++|||||++++++.
T Consensus 8 ~~~~~~y~--~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 85 (361)
T 2yab_A 8 QKVEDFYD--IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE 85 (361)
T ss_dssp SCGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred CChhhceE--EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 34445566 889999999999999986 5799999999975432 2467889999999999999999999999
Q ss_pred cCCeeEEEEcccCCCChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC----CeeEcc
Q 002875 674 NRHQAYLLYDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAE 747 (872)
Q Consensus 674 ~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~----~~ki~d 747 (872)
+.+..|+||||+++|+|.+++... .++.+...++.||+.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 86 ~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 999999999999999999999763 57888999999999999999999 999999999999998776 799999
Q ss_pred ccccccccccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccccccc
Q 002875 748 FGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 826 (872)
Q Consensus 748 fg~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (872)
||+++....... ....++..|.+||+..+..++.++||||+||++|||+||..||.+..... ....+......
T Consensus 163 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~------~~~~i~~~~~~ 236 (361)
T 2yab_A 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITAVSYD 236 (361)
T ss_dssp CSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCCC
T ss_pred cCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcCCC
Confidence 999976543322 22336677889999888888999999999999999999999997543211 11111111100
Q ss_pred CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 827 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 827 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
...+........+.+++.+||..||++|||++|++++
T Consensus 237 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0001112233567889999999999999999999864
No 54
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.1e-39 Score=354.43 Aligned_cols=244 Identities=21% Similarity=0.266 Sum_probs=194.1
Q ss_pred hhhhccCCCCCceeeeec--------CCCcEEEEEEeeccc--hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEE
Q 002875 612 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~--------~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 680 (872)
..+.||+|+||.||+|.. .++..||||+++... ...+.+.+|+++++++ +|||||+++++|.+.+..|+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 788999999999999974 356689999997543 2356788999999999 89999999999999999999
Q ss_pred EEcccCCCChHHHhhCC------------------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC
Q 002875 681 LYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 742 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~~------------------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~ 742 (872)
||||+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 241 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 241 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECCCCC
Confidence 99999999999999642 47888899999999999999999 9999999999999999999
Q ss_pred eeEccccccccccccCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccc
Q 002875 743 PHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 817 (872)
Q Consensus 743 ~ki~dfg~~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~ 817 (872)
+||+|||+++....... ....++..|.+||...+..++.++|||||||++|||+| |+.||.+..... ..
T Consensus 242 ~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~------~~ 315 (370)
T 2psq_A 242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------LF 315 (370)
T ss_dssp EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG------HH
T ss_pred EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH------HH
Confidence 99999999975433221 11123345788898888889999999999999999999 777776432111 11
Q ss_pred cccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 818 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
..+........+ .....++.+++.+||+.||++|||++|+++.|+.+
T Consensus 316 ~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 316 KLLKEGHRMDKP---ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp HHHHTTCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111111101111 12234677899999999999999999999999875
No 55
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-39 Score=348.98 Aligned_cols=246 Identities=21% Similarity=0.270 Sum_probs=191.2
Q ss_pred chhhhccCCCCCceeeeecCCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 611 TECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
...+.||+|+||.||+|.. +|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..++||||+++
T Consensus 40 ~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 3p86_A 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118 (309)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTT
T ss_pred eeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCC
Confidence 3788999999999999976 78999999987543 2355788999999999999999999999999999999999999
Q ss_pred CChHHHhhCC-----CCHHHHHHHHHHHHHHHHHHhhCCCCC--cccCCCCCCCeeeCCCCCeeEccccccccccccC--
Q 002875 688 GNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 758 (872)
Q Consensus 688 g~L~~~l~~~-----~~~~~~~~i~~~i~~gl~~lH~~~~~~--i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~-- 758 (872)
|+|.+++... .++.++..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++......
T Consensus 119 ~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 195 (309)
T 3p86_A 119 GSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS 195 (309)
T ss_dssp CBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----------
T ss_pred CcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccc
Confidence 9999999763 57888899999999999999998 7 9999999999999999999999999987543321
Q ss_pred CCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002875 759 GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 759 ~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
.....++..|.+||...+..++.++||||+||++|||+||+.||......... .... ........+ .....+
T Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~---~~~~--~~~~~~~~~---~~~~~~ 267 (309)
T 3p86_A 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV---AAVG--FKCKRLEIP---RNLNPQ 267 (309)
T ss_dssp ------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHH---HHHH--HSCCCCCCC---TTSCHH
T ss_pred cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHH--hcCCCCCCC---ccCCHH
Confidence 11223556688899988888899999999999999999999998743321100 0000 000001111 122345
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 839 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 778999999999999999999999998663
No 56
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.9e-40 Score=353.74 Aligned_cols=247 Identities=16% Similarity=0.211 Sum_probs=191.9
Q ss_pred hhHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCee
Q 002875 602 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 678 (872)
Q Consensus 602 ~~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 678 (872)
+++.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..
T Consensus 6 ~~l~~~y~--i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~ 83 (347)
T 3zgw_A 6 DELLKYYE--LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKI 83 (347)
T ss_dssp TTTTTTEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHhcCeE--EEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEE
Confidence 34455566 889999999999999984 789999999997543 2345678999999999999999999999999999
Q ss_pred EEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccc
Q 002875 679 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 756 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~ 756 (872)
++|||||++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 84 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 84 FMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 999999999999999854 568889999999999999999999 999999999999999999999999999865432
Q ss_pred cCC---CCcccccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002875 757 ADG---SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 832 (872)
Q Consensus 757 ~~~---~~~~~~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (872)
... ....++.+|++||...+..+ +.++||||+||++|||+||..||.+..... ....+.... ...+.
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~-- 231 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA------LYKKIMRGK-YDVPK-- 231 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC-CCCCT--
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCC-CCCCC--
Confidence 221 12235667888898876654 888999999999999999999987533111 111111111 00111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 833 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 833 ~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.....+.+++.+||+.||++|||++|++++
T Consensus 232 -~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 232 -WLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -CCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 122456789999999999999999999875
No 57
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-39 Score=342.09 Aligned_cols=247 Identities=20% Similarity=0.275 Sum_probs=199.8
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCChH
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 691 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L~ 691 (872)
..+.+|+|+||.||+|...+++.||||++.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 78899999999999999988999999999876666778999999999999999999999999999999999999999999
Q ss_pred HHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC---CCCcccc
Q 002875 692 EKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 765 (872)
Q Consensus 692 ~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~---~~~~~~~ 765 (872)
+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....+.
T Consensus 94 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 170 (269)
T 4hcu_A 94 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 170 (269)
T ss_dssp HHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred HHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccc
Confidence 999653 57888999999999999999999 99999999999999999999999999987543221 1111223
Q ss_pred cccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002875 766 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 844 (872)
Q Consensus 766 ~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 844 (872)
..|.+||......++.++||||+||++|||+| |..||....... ....+........+. .....+.+++.
T Consensus 171 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~li~ 241 (269)
T 4hcu_A 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFRLYKPR---LASTHVYQIMN 241 (269)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTCCCCCCT---TSCHHHHHHHH
T ss_pred cccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH------HHHHHhcCccCCCCC---cCCHHHHHHHH
Confidence 34778898888889999999999999999999 777775432110 011111110011111 11245778899
Q ss_pred HcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 845 LCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 845 ~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
+||+.||++|||++|++++|+.+...
T Consensus 242 ~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 242 HCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHccCCcccCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999987654
No 58
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.6e-38 Score=359.07 Aligned_cols=349 Identities=18% Similarity=0.162 Sum_probs=192.8
Q ss_pred CCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCcccc-CccccCCCCCCEEEccCCcccccCCcccCCCCCCcEee
Q 002875 42 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV-PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLH 120 (872)
Q Consensus 42 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~-p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 120 (872)
++|++|+|++|.+.+..|..|..+++|++|++++|.+.+.+ |..|.++++|++|+|++|.+.+..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 44555555555554444444555555555555555443222 33445555555555555555444444555555555555
Q ss_pred CccCcCCccCCcc--CCCCCCCCEEEccCccCcccCCcc-ccCCCCCcEEEeecCCCcccCCccCcCC--CCCCEEEccC
Q 002875 121 LAGNLLNDQIPAE--LGMLKTVTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKELSNL--TKLESLFLFR 195 (872)
Q Consensus 121 L~~n~l~~~~p~~--l~~L~~L~~L~l~~n~~~~~~p~~-~~~l~~L~~L~ls~n~l~~~~p~~l~~l--~~L~~L~L~~ 195 (872)
|++|.+++..+.. ++.+++|++|++++|.+.+..|.. +.++++|++|++++|.+.+..+..+..+ .+|+.|+++.
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 5555544433322 444555555555555544444433 4455555555555555554444444433 3455555555
Q ss_pred CCCcccCCccc--------ccCCCCCEEeCcCCCCcCcCCccccCC---CCCCEEEcccccCCCC----------CCccc
Q 002875 196 NQLAGQVPWEF--------SRVTTLKSLDLSDNRLSGPIPESFADL---KNLRLLSLMYNEMSGT----------VPESL 254 (872)
Q Consensus 196 n~l~~~~~~~~--------~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~----------~p~~l 254 (872)
|.+.+..+..+ ..+++|++|++++|++++..|..+..+ ++|+.|+++.|...+. .+..+
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 55544333221 133455555555555554444433322 4555555555433221 11111
Q ss_pred cC--CCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCC
Q 002875 255 VQ--LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSL 332 (872)
Q Consensus 255 ~~--l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L 332 (872)
.. .++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+.....|+.|++++|.+.+..+..+.++++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 11 2466666666666666666666666666666666666665555566666666666666666666666667777777
Q ss_pred cEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccccCCCC
Q 002875 333 VRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPK 390 (872)
Q Consensus 333 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~ 390 (872)
++|++++|++++..|..|..+++|++|++++|++++..+..+..+++|++|++++|+.
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 407 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCc
Confidence 7777777777777777777777777777777777766566667777777777777754
No 59
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.6e-39 Score=344.80 Aligned_cols=252 Identities=19% Similarity=0.224 Sum_probs=189.2
Q ss_pred hhcCcchhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhc--cCCCCceeEEEEEec----CCeeE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGT--VRHKNLIRLLGFCYN----RHQAY 679 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~----~~~~~ 679 (872)
+.|. ..+.||+|+||.||+|+. +|+.||||++.... .+.+.+|.+++.. ++||||+++++++.. ....+
T Consensus 8 ~~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 8 RDIT--LLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGCE--EEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred CcEE--EEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 3455 889999999999999987 79999999997543 3344445555544 899999999999764 34689
Q ss_pred EEEcccCCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHh--------hCCCCCcccCCCCCCCeeeCCCCCeeEccccc
Q 002875 680 LLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 750 (872)
Q Consensus 680 lv~ey~~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH--------~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~ 750 (872)
+||||+++|+|.++++. ..++.....++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 99999999999999976 4588999999999999999999 66 999999999999999999999999999
Q ss_pred cccccccCC------CCcccccccCchhhhccc------CCcccccchhHHHHHHHHHcC----------CCCCCCCCCC
Q 002875 751 KYLTQLADG------SFPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNAGSSL 808 (872)
Q Consensus 751 ~~~~~~~~~------~~~~~~~~~~~~e~~~~~------~~~~~~Dv~S~Gvil~el~tg----------~~p~~~~~~~ 808 (872)
++....... ....++..|.+||..... .++.++|||||||++|||+|| +.||......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 865433221 112355667888887654 445789999999999999999 6666543221
Q ss_pred CCccccccccccc--cccccCCCC--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 809 QNKPIDGLLGEMY--NENEVGSSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 809 ~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
.... . ...... .......+. ........+.+++.+||+.||++|||++|+++.|+.+
T Consensus 240 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSF-E-DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCH-H-HHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred Ccch-h-hhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1110 0 000000 000011111 1234567788999999999999999999999999875
No 60
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.2e-39 Score=346.67 Aligned_cols=242 Identities=15% Similarity=0.222 Sum_probs=195.6
Q ss_pred hhhhccCCCCCceeeeecC-CCcEEEEEEeeccch-hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCC
Q 002875 612 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 689 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~ 689 (872)
..+.||+|+||.||+|... +|+.||||++..... ..+.+.+|+.++++++|||||+++++|...+..++||||+++|+
T Consensus 49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 5678999999999999965 799999999975433 45678899999999999999999999999999999999999999
Q ss_pred hHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--CCccccc
Q 002875 690 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 766 (872)
Q Consensus 690 L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--~~~~~~~ 766 (872)
|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....++.
T Consensus 129 L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 205 (321)
T 2c30_A 129 LTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 205 (321)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCc
Confidence 9999876 468999999999999999999999 999999999999999999999999999875433221 1223556
Q ss_pred ccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002875 767 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 846 (872)
Q Consensus 767 ~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c 846 (872)
.|.+||......++.++|||||||++|||+||+.||....... ....+.... .+...........+.+++.+|
T Consensus 206 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~ 278 (321)
T 2c30_A 206 YWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ------AMKRLRDSP-PPKLKNSHKVSPVLRDFLERM 278 (321)
T ss_dssp GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSS-CCCCTTGGGSCHHHHHHHHHH
T ss_pred cccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhcCC-CCCcCccccCCHHHHHHHHHH
Confidence 6888898888888999999999999999999999987543211 011111111 000111112234577899999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 002875 847 TRSTPSDRPSMEEALKL 863 (872)
Q Consensus 847 l~~dp~~Rpt~~~v~~~ 863 (872)
|+.||++|||++|++++
T Consensus 279 l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 279 LVRDPQERATAQELLDH 295 (321)
T ss_dssp SCSSTTTSCCHHHHHTS
T ss_pred ccCChhhCcCHHHHhcC
Confidence 99999999999999875
No 61
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=7.2e-39 Score=358.11 Aligned_cols=251 Identities=17% Similarity=0.136 Sum_probs=198.4
Q ss_pred hhHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCe
Q 002875 602 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 677 (872)
Q Consensus 602 ~~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 677 (872)
..+.+.|. ..+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|+.++++++|||||++++++.+++.
T Consensus 7 ~~~~~~Y~--i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 84 (444)
T 3soa_A 7 TRFTEEYQ--LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGH 84 (444)
T ss_dssp CHHHHHEE--EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSE
T ss_pred ccccCCeE--EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCE
Confidence 44556676 889999999999999984 689999999997543 235568899999999999999999999999999
Q ss_pred eEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeC---CCCCeeEccccccc
Q 002875 678 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKY 752 (872)
Q Consensus 678 ~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~---~~~~~ki~dfg~~~ 752 (872)
.|+|||||++|+|.+.+.. ..++.+...++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 85 ~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 85 HYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 9999999999999999865 457888899999999999999999 999999999999998 46789999999997
Q ss_pred cccccCCC--CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002875 753 LTQLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 830 (872)
Q Consensus 753 ~~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (872)
........ ...++.+|.+||......++.++||||+||++|||++|..||.+..... ....+.........+
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~~ 235 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR------LYQQIKAGAYDFPSP 235 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHTCCCCCTT
T ss_pred EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHhCCCCCCcc
Confidence 65433221 2236677889999888889999999999999999999999997543211 011111111010111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 831 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 831 ~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.......++.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 122234567889999999999999999999875
No 62
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=346.84 Aligned_cols=251 Identities=18% Similarity=0.192 Sum_probs=199.0
Q ss_pred hhHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch-------hHHHHHHHHHHhhccCCCCceeEEEEEe
Q 002875 602 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCY 673 (872)
Q Consensus 602 ~~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~~~~~ 673 (872)
.++.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|+.++++++|||||++++++.
T Consensus 7 ~~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 84 (326)
T 2y0a_A 7 ENVDDYYD--TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE 84 (326)
T ss_dssp SCHHHHEE--EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CCcccceE--eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 34455566 889999999999999986 5799999999975322 3567889999999999999999999999
Q ss_pred cCCeeEEEEcccCCCChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC----CeeEcc
Q 002875 674 NRHQAYLLYDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAE 747 (872)
Q Consensus 674 ~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~----~~ki~d 747 (872)
+.+..++||||+++|+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 85 NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred eCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 999999999999999999999753 57888999999999999999999 999999999999999877 799999
Q ss_pred ccccccccccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccccccc
Q 002875 748 FGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 826 (872)
Q Consensus 748 fg~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (872)
||+++....... ....++..|.+||......++.++||||+||++|||+||..||....... ....+......
T Consensus 162 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~~~~~~~~ 235 (326)
T 2y0a_A 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANVSAVNYE 235 (326)
T ss_dssp CTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHTCCC
T ss_pred CCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHHhcCCC
Confidence 999976543222 22235666888999888888999999999999999999999987533111 00011000000
Q ss_pred CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 827 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 827 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
............+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000111223467789999999999999999999875
No 63
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=346.14 Aligned_cols=245 Identities=19% Similarity=0.262 Sum_probs=194.1
Q ss_pred hhhhccCCCCCceeeeecC----CCcEEEEEEeecc--chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~----~g~~vavK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+.||+|+||.||+|... .+..||||+++.. ....+.+.+|+.++++++|||||+++++|.+.+..|+||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 7889999999999999863 4556999999754 234567889999999999999999999999999999999999
Q ss_pred CCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCC-
Q 002875 686 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 761 (872)
Q Consensus 686 ~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~- 761 (872)
++|+|.++++. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 133 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (325)
T 3kul_A 133 ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209 (325)
T ss_dssp TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCE
T ss_pred CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCcccee
Confidence 99999999964 458889999999999999999999 99999999999999999999999999997654322111
Q ss_pred ----cccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 762 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 762 ----~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
..++..|.+||...+..++.++|||||||++|||+| |..||....... ....+........+. ...
T Consensus 210 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~ 280 (325)
T 3kul_A 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD------VISSVEEGYRLPAPM---GCP 280 (325)
T ss_dssp ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH------HHHHHHTTCCCCCCT---TCC
T ss_pred eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHHcCCCCCCCC---CcC
Confidence 112335778898887788999999999999999999 888876432211 011111111011111 223
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 837 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
..+.+++..||+.||++|||++|+++.|+.+.
T Consensus 281 ~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 281 HALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 46778999999999999999999999998763
No 64
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.7e-39 Score=361.98 Aligned_cols=245 Identities=17% Similarity=0.268 Sum_probs=198.0
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCChH
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 691 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L~ 691 (872)
..+.||+|+||.||+|...+++.||||+++......+.+.+|+.+|++++|||||++++++. .+..|+|||||++|+|.
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 77899999999999999988999999999876667788999999999999999999999986 56789999999999999
Q ss_pred HHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC---CCCccc
Q 002875 692 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAK 764 (872)
Q Consensus 692 ~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~---~~~~~~ 764 (872)
++++. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 347 (454)
T 1qcf_A 271 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 347 (454)
T ss_dssp HHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSS
T ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcc
Confidence 99975 467888899999999999999999 99999999999999999999999999997643211 111112
Q ss_pred ccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 843 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 843 (872)
...|.+||......++.++|||||||++|||+| |+.||.+..... ....+......+.+. ....++.+++
T Consensus 348 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l~~li 418 (454)
T 1qcf_A 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE------VIRALERGYRMPRPE---NCPEELYNIM 418 (454)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHHHTCCCCCCT---TSCHHHHHHH
T ss_pred cccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCCHHHHHHH
Confidence 334678888887889999999999999999999 777776432111 011111111011111 2234677899
Q ss_pred HHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 844 LLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 844 ~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
.+||+.||++||||+++++.|+.+..
T Consensus 419 ~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 419 MRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred HHHccCChhHCcCHHHHHHHHHHHHh
Confidence 99999999999999999999998753
No 65
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.1e-39 Score=352.24 Aligned_cols=244 Identities=20% Similarity=0.285 Sum_probs=187.0
Q ss_pred hhhhccCCCCCceeeeecC----CCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~----~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+.||+|+||.||+|+.. ++..||||+++... ...+.+.+|+.++++++|||||+++|+|.+.+..++||||+
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCC
Confidence 7889999999999999864 67889999997542 34567899999999999999999999999999999999999
Q ss_pred CCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCC-
Q 002875 686 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 761 (872)
Q Consensus 686 ~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~- 761 (872)
++|+|.++++. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 129 ~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 205 (373)
T 2qol_A 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205 (373)
T ss_dssp TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCCccce
Confidence 99999999976 358889999999999999999999 99999999999999999999999999987654322111
Q ss_pred --c--ccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 762 --P--AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 762 --~--~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
. .+...|.+||......++.++|||||||++|||+| |+.||....... .......... .+... ...
T Consensus 206 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~---~~~~i~~~~~---~~~~~---~~~ 276 (373)
T 2qol_A 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD---VIKAVDEGYR---LPPPM---DCP 276 (373)
T ss_dssp --------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH---HHHHHHTTEE---CCCCT---TCB
T ss_pred eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCCC---CCCCc---ccc
Confidence 1 12234778888888889999999999999999998 888886432111 0000111111 11111 223
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 837 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
..+.+++.+||+.||++||+++|+++.|+.+
T Consensus 277 ~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 277 AALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 4677899999999999999999999999876
No 66
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8.4e-39 Score=342.83 Aligned_cols=256 Identities=17% Similarity=0.232 Sum_probs=193.9
Q ss_pred hhHHhhcCcchhhhccCCCCCceeeeecCCCcEEEEEEeeccch---hHHHHHHHHHHhhccCCCCceeEEEEEecCCee
Q 002875 602 NDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 678 (872)
Q Consensus 602 ~~~~~~~~~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 678 (872)
+.+.+.|. ..+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++|||||++++++.+++..
T Consensus 17 q~l~~~y~--~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 94 (311)
T 3niz_A 17 QGLMEKYQ--KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94 (311)
T ss_dssp ECSSCEEE--EEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCE
T ss_pred cchHhhhH--hhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEE
Confidence 33445566 8899999999999999998899999999975332 246778999999999999999999999999999
Q ss_pred EEEEcccCCCChHHHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccc
Q 002875 679 YLLYDYLPNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 755 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~ 755 (872)
++|||||++ +|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 95 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 95 TLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 999999984 888887653 57888899999999999999999 99999999999999999999999999997654
Q ss_pred ccCC--CCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc-ccccccc----------
Q 002875 756 LADG--SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEMY---------- 821 (872)
Q Consensus 756 ~~~~--~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~-~~~~~~~---------- 821 (872)
.... ....++.+|.+||...+ ..++.++||||+||++|||+||+.||............ .......
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTS
T ss_pred CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhcc
Confidence 2221 12234566788887754 56789999999999999999999998754322110000 0000000
Q ss_pred ----cccc-cCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 822 ----NENE-VGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 822 ----~~~~-~~~~~~~----~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+... ....... +....++.+++.+||+.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000 0000000 1123467899999999999999999999974
No 67
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.5e-39 Score=358.42 Aligned_cols=246 Identities=18% Similarity=0.210 Sum_probs=194.9
Q ss_pred hhhhccCCCCCceeeeecC-CCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 612 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
..+.||+|+||.||+|... +|+.||||.++... ...+.+.+|+++|++++|||||+++|+|.+++..|+|||||++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 7789999999999999974 79999999987542 23456788999999999999999999999999999999999999
Q ss_pred ChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC----CC
Q 002875 689 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----SF 761 (872)
Q Consensus 689 ~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~----~~ 761 (872)
+|.++++. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 198 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~ 274 (377)
T 3cbl_A 198 DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274 (377)
T ss_dssp BHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSC
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCC
Confidence 99999975 368889999999999999999999 999999999999999999999999999875332111 11
Q ss_pred cccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002875 762 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 840 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (872)
......|.+||......++.++|||||||++|||+| |..|+....... ....... ....+.+.. ....+.
T Consensus 275 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~---~~~~~~~---~~~~~~~~~---~~~~l~ 345 (377)
T 3cbl_A 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ---TREFVEK---GGRLPCPEL---CPDAVF 345 (377)
T ss_dssp CEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH---HHHHHHT---TCCCCCCTT---CCHHHH
T ss_pred CCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHc---CCCCCCCCC---CCHHHH
Confidence 112334678888877788999999999999999999 777765432111 0000101 000111111 224577
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 841 DVALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 841 ~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
+++.+||+.||++|||++|+++.|+.++.
T Consensus 346 ~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 346 RLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 89999999999999999999999988754
No 68
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=9.6e-39 Score=338.11 Aligned_cols=245 Identities=16% Similarity=0.190 Sum_probs=196.0
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCChH
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 691 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L~ 691 (872)
..+.||+|+||.||+|...++..||||++.......+.+.+|++++++++||||++++++|.+.+..++||||+++|+|.
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 78999999999999999999999999999876666778899999999999999999999999999999999999999999
Q ss_pred HHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC---CCCcccc
Q 002875 692 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 765 (872)
Q Consensus 692 ~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~---~~~~~~~ 765 (872)
+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....++
T Consensus 108 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 184 (283)
T 3gen_A 108 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 184 (283)
T ss_dssp HHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSC
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccC
Confidence 99965 468899999999999999999999 99999999999999999999999999987543221 1111223
Q ss_pred cccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002875 766 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 844 (872)
Q Consensus 766 ~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 844 (872)
..|.+||......++.++||||+||++|||+| |+.||....... ......+..... .+.. ....+.+++.
T Consensus 185 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~~~~~~~~---~~~~---~~~~l~~li~ 255 (283)
T 3gen_A 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE---TAEHIAQGLRLY---RPHL---ASEKVYTIMY 255 (283)
T ss_dssp GGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHHHHHTTCCCC---CCTT---CCHHHHHHHH
T ss_pred cccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH---HHHHHhcccCCC---CCCc---CCHHHHHHHH
Confidence 44778888887788999999999999999999 888876432111 001111111110 0111 1245778999
Q ss_pred HcccCCCCCCCCHHHHHHHHcccC
Q 002875 845 LCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 845 ~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
+||+.||++|||++|++++|+++.
T Consensus 256 ~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 256 SCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHccCChhHCcCHHHHHHHHHHHh
Confidence 999999999999999999998763
No 69
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=8.8e-39 Score=349.49 Aligned_cols=249 Identities=17% Similarity=0.187 Sum_probs=197.9
Q ss_pred HHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeE
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 679 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 679 (872)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++.+++..|
T Consensus 27 ~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 27 FSDNYD--VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cccCeE--EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 445566 889999999999999986 579999999997543 23567889999999999999999999999999999
Q ss_pred EEEcccCCCChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC---CCeeEccccccccc
Q 002875 680 LLYDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLT 754 (872)
Q Consensus 680 lv~ey~~~g~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~---~~~ki~dfg~~~~~ 754 (872)
+|||||++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.+ +.+||+|||+++..
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 999999999999998753 57888999999999999999999 99999999999999865 45999999999765
Q ss_pred cccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002875 755 QLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 833 (872)
Q Consensus 755 ~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (872)
..... ....++.+|.+||+.....++.++||||+||++|||+||..||.+..... ....+.........+...
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 255 (362)
T 2bdw_A 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR------LYAQIKAGAYDYPSPEWD 255 (362)
T ss_dssp TTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCTTGGG
T ss_pred cCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCCCCCCccccc
Confidence 43222 12235667888999888888999999999999999999999987543211 011111111010111222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 834 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 834 ~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
....++.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 256 TVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 334567899999999999999999999865
No 70
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.5e-38 Score=343.30 Aligned_cols=239 Identities=12% Similarity=0.061 Sum_probs=193.7
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeecc----chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||+++.. ....+.+.+|+.++++++|||||++++++.+.+..|+||||++
T Consensus 9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 789999999999999986 57999999999753 2235667889999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--CCCc
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSFP 762 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~--~~~~ 762 (872)
+|+|.+++.. ..++.+...++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 89 gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~ 165 (337)
T 1o6l_A 89 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 165 (337)
T ss_dssp TCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCC
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCccccc
Confidence 9999999865 457888899999999999999999 99999999999999999999999999987532221 1223
Q ss_pred ccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002875 763 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 842 (872)
Q Consensus 763 ~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 842 (872)
.++..|.+||+..+..++.++||||+||++|||+||+.||....... ....+.... ...+. ....++.++
T Consensus 166 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~---~~s~~~~~l 235 (337)
T 1o6l_A 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER------LFELILMEE-IRFPR---TLSPEAKSL 235 (337)
T ss_dssp EECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCT---TSCHHHHHH
T ss_pred ccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH------HHHHHHcCC-CCCCC---CCCHHHHHH
Confidence 35667888999888888999999999999999999999987543111 111111111 11111 123457789
Q ss_pred HHHcccCCCCCCC-----CHHHHHHH
Q 002875 843 ALLCTRSTPSDRP-----SMEEALKL 863 (872)
Q Consensus 843 ~~~cl~~dp~~Rp-----t~~~v~~~ 863 (872)
+.+||+.||++|| +++|++++
T Consensus 236 i~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 236 LAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 9999999999999 89999865
No 71
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7.9e-39 Score=351.09 Aligned_cols=247 Identities=18% Similarity=0.155 Sum_probs=191.8
Q ss_pred cCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEccc
Q 002875 608 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 608 ~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
|.+...+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||+++++|.+.+..++||||+
T Consensus 89 ~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 4433567899999999999985 679999999997643 34667899999999999999999999999999999999999
Q ss_pred CCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee--CCCCCeeEccccccccccccCC-
Q 002875 686 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF--DENMEPHLAEFGFKYLTQLADG- 759 (872)
Q Consensus 686 ~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill--~~~~~~ki~dfg~~~~~~~~~~- 759 (872)
++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.......
T Consensus 169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~ 245 (373)
T 2x4f_A 169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245 (373)
T ss_dssp TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence 99999998854 368889999999999999999999 99999999999999 6678899999999976543222
Q ss_pred CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002875 760 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 839 (872)
Q Consensus 760 ~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (872)
....++..|.+||+.....++.++|||||||++|||+||+.||....... .+..+.................++
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~ 319 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE------TLNNILACRWDLEDEEFQDISEEA 319 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCCCSCSGGGTTSCHHH
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhccCCCChhhhccCCHHH
Confidence 12235667888998888888999999999999999999999987543211 111111111011111112234567
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHH
Q 002875 840 LDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 840 ~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.+++.+||+.||++|||++|++++
T Consensus 320 ~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 320 KEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHcCCChhhCCCHHHHhcC
Confidence 899999999999999999999874
No 72
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.3e-38 Score=362.81 Aligned_cols=247 Identities=21% Similarity=0.251 Sum_probs=198.4
Q ss_pred hhhhccCCCCCceeeeecC-CCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCCh
Q 002875 612 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 690 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L 690 (872)
..+.||+|+||.||+|+.. +|+.||||.++......+.+.+|+.+|++++|||||+++|+|.+.+..|+|||||++|+|
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 7789999999999999975 589999999987666678899999999999999999999999999999999999999999
Q ss_pred HHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC---Ccc
Q 002875 691 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FPA 763 (872)
Q Consensus 691 ~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~---~~~ 763 (872)
.++++. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........ ...
T Consensus 304 ~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 380 (495)
T 1opk_A 304 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 380 (495)
T ss_dssp HHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCC
T ss_pred HHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCc
Confidence 999974 357888999999999999999999 9999999999999999999999999999765322111 111
Q ss_pred cccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002875 764 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 842 (872)
Q Consensus 764 ~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 842 (872)
....|.+||......++.++|||||||++|||+| |..||....... ....+..... ...+. .....+.++
T Consensus 381 ~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~~~---~~~~~---~~~~~l~~l 451 (495)
T 1opk_A 381 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKDYR---MERPE---GCPEKVYEL 451 (495)
T ss_dssp CCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHHTTCC---CCCCT---TCCHHHHHH
T ss_pred CCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCCC---CCCCC---CCCHHHHHH
Confidence 2234677888877788999999999999999999 667765432111 0011111111 11111 223467789
Q ss_pred HHHcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 843 ALLCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 843 ~~~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
+.+||+.||++||||+|+++.|+.+...
T Consensus 452 i~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 452 MRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999987543
No 73
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.2e-39 Score=349.75 Aligned_cols=246 Identities=15% Similarity=0.165 Sum_probs=194.5
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc------hhHHHHHHHHHHhhccCCCCceeEEEEEecCCee
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 678 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 678 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++.+++..
T Consensus 24 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 24 DVYE--LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cceE--EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3455 889999999999999985 679999999996432 1356789999999999999999999999999999
Q ss_pred EEEEcccCCCChHHHhhC------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC---eeEcccc
Q 002875 679 YLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFG 749 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~---~ki~dfg 749 (872)
|+|||||++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCc
Confidence 999999999999988754 257888899999999999999999 9999999999999986654 9999999
Q ss_pred ccccccccCC--CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccC
Q 002875 750 FKYLTQLADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 827 (872)
Q Consensus 750 ~~~~~~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (872)
+++....... ....++.+|.+||......++.++||||+||++|||+||+.||..... .....+.......
T Consensus 179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~i~~~~~~~ 251 (351)
T 3c0i_A 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-------RLFEGIIKGKYKM 251 (351)
T ss_dssp TCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-------HHHHHHHHTCCCC
T ss_pred ceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-------HHHHHHHcCCCCC
Confidence 9976543221 122356678899998888889999999999999999999999875321 0111111111000
Q ss_pred CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 828 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 828 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
..........++.+++.+||+.||++|||+.|++++
T Consensus 252 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 252 NPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 011111223567899999999999999999999864
No 74
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-38 Score=341.35 Aligned_cols=238 Identities=16% Similarity=0.124 Sum_probs=191.1
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++.+++..++||||+
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 889999999999999995 789999999997532 12456889999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-CCcc
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 763 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~-~~~~ 763 (872)
+|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++++++.+||+|||++........ ....
T Consensus 92 ~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~ 168 (336)
T 3h4j_B 92 GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC 168 (336)
T ss_dssp CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCT
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCccccccc
Confidence 7899998854 568889999999999999999999 999999999999999999999999999876543321 2233
Q ss_pred cccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002875 764 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 842 (872)
Q Consensus 764 ~~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 842 (872)
++..|.+||...+..+ +.++||||+||++|||+||+.||.+...... ...+.... ...++ .....+.++
T Consensus 169 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~------~~~i~~~~-~~~p~---~~s~~~~~l 238 (336)
T 3h4j_B 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL------FKKVNSCV-YVMPD---FLSPGAQSL 238 (336)
T ss_dssp TSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC------BCCCCSSC-CCCCT---TSCHHHHHH
T ss_pred CCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH------HHHHHcCC-CCCcc---cCCHHHHHH
Confidence 5667888888776554 6789999999999999999999975432211 11111100 00111 122457789
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 002875 843 ALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 843 ~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+.+||+.||++|||++|++++
T Consensus 239 i~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 239 IRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp HHTTSCSSGGGSCCHHHHTTC
T ss_pred HHHHcCCChhHCcCHHHHHhC
Confidence 999999999999999999864
No 75
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=338.87 Aligned_cols=254 Identities=13% Similarity=0.113 Sum_probs=196.6
Q ss_pred chhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCC--eeEEEEccc
Q 002875 611 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDYL 685 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ey~ 685 (872)
...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++...+ ..++||||+
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 91 (319)
T 4euu_A 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (319)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred EEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCC
Confidence 3788999999999999986 469999999997533 23567789999999999999999999998755 789999999
Q ss_pred CCCChHHHhhCC-----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee----CCCCCeeEccccccccccc
Q 002875 686 PNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKYLTQL 756 (872)
Q Consensus 686 ~~g~L~~~l~~~-----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill----~~~~~~ki~dfg~~~~~~~ 756 (872)
++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 92 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 999999999762 68899999999999999999999 99999999999999 7888899999999976543
Q ss_pred cCCC-CcccccccCchhhhc--------ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcc--ccccccc------
Q 002875 757 ADGS-FPAKIAWTESGEFYN--------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP--IDGLLGE------ 819 (872)
Q Consensus 757 ~~~~-~~~~~~~~~~~e~~~--------~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~--~~~~~~~------ 819 (872)
.... ...++..|.+||... ...++.++|||||||++|||+||+.||.......... .......
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (319)
T 4euu_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI 248 (319)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCC
T ss_pred CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccc
Confidence 3222 222555677888765 4578889999999999999999999986432211100 0000000
Q ss_pred ---------c--ccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 820 ---------M--YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 820 ---------~--~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
. ..................+.+++.+||+.||++|||++|++++.++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 0 00000111122345566788999999999999999999999998643
No 76
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.5e-38 Score=347.69 Aligned_cols=246 Identities=16% Similarity=0.127 Sum_probs=187.1
Q ss_pred chhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCC
Q 002875 611 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 689 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~ 689 (872)
...+.||+|+||.||++.. .+|+.||||++.......+.+.+|+.++++++|||||++++++.+++..|+|||||++|+
T Consensus 23 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~ 102 (361)
T 3uc3_A 23 DFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGE 102 (361)
T ss_dssp EEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred EEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCC
Confidence 3889999999999999986 489999999998765556778899999999999999999999999999999999999999
Q ss_pred hHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC--eeEccccccccccccC-CCCccc
Q 002875 690 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKYLTQLAD-GSFPAK 764 (872)
Q Consensus 690 L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~--~ki~dfg~~~~~~~~~-~~~~~~ 764 (872)
|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++...... .....+
T Consensus 103 L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g 179 (361)
T 3uc3_A 103 LYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG 179 (361)
T ss_dssp HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------------
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcC
Confidence 9999864 568889999999999999999999 9999999999999987765 9999999987432221 122235
Q ss_pred ccccCchhhhcccCCccc-ccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKEEMY-MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 843 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~~~~-~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 843 (872)
+.+|.+||...+..+..+ +||||+||++|||+||+.||......... ......+...... .+........+.+++
T Consensus 180 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~s~~~~~li 255 (361)
T 3uc3_A 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRILSVKYS--IPDDIRISPECCHLI 255 (361)
T ss_dssp -CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHHHTTCCC--CCTTSCCCHHHHHHH
T ss_pred CCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHHhcCCCC--CCCcCCCCHHHHHHH
Confidence 667888898876666544 89999999999999999999754332211 1111111111100 000011224677899
Q ss_pred HHcccCCCCCCCCHHHHHHH
Q 002875 844 LLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 844 ~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.+||+.||++|||++|++++
T Consensus 256 ~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 256 SRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHSCSCTTTSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHHhC
Confidence 99999999999999999875
No 77
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=350.06 Aligned_cols=245 Identities=16% Similarity=0.169 Sum_probs=192.2
Q ss_pred hhhhccCCCCCceeeeec------CCCcEEEEEEeecc--chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEc
Q 002875 612 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~------~~g~~vavK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 683 (872)
..+.||+|+||.||+|.. .+++.||||++... ......+.+|+.++++++|||||++++++.+.+..++|||
T Consensus 75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEE
Confidence 788999999999999984 35779999999653 2345568889999999999999999999999999999999
Q ss_pred ccCCCChHHHhhC---------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC---CeeEcccccc
Q 002875 684 YLPNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFK 751 (872)
Q Consensus 684 y~~~g~L~~~l~~---------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~---~~ki~dfg~~ 751 (872)
||++|+|.+++.. ..++.+.+.++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 9999999999964 257889999999999999999999 999999999999999554 5999999998
Q ss_pred ccccccCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcccccccccccccccc
Q 002875 752 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 826 (872)
Q Consensus 752 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (872)
+....... ....++..|.+||......++.++|||||||++|||+| |..||....... ....+......
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~------~~~~i~~~~~~ 305 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE------VLEFVTSGGRM 305 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHHTTCCC
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCC
Confidence 75422211 11223456788898888889999999999999999999 777776432111 01111111101
Q ss_pred CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 827 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 827 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
..+. .....+.+++.+||+.||++|||++|++++|+.+.
T Consensus 306 ~~~~---~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 306 DPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCc---cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 1111 12345778999999999999999999999997653
No 78
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.6e-37 Score=347.61 Aligned_cols=289 Identities=23% Similarity=0.295 Sum_probs=147.7
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCC-------------cEEECcCCcCccccC
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNL-------------LVLDAFSNSFSGSVP 83 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L-------------~~LdL~~n~l~~~~p 83 (872)
.+.|++|++++|.+ +.+|.+|.++++|++|++++|.+.+.+|.+++.+++| ++|++++|.+++ +|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 56788889998888 6778888889999999999888888888888888765 777777777664 33
Q ss_pred ccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCC
Q 002875 84 AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSE 163 (872)
Q Consensus 84 ~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~ 163 (872)
.. .++|++|++++|.+++ +|.. +++|++|++++|.+++. |.. .++|++|++++|.+.+ +| .++++++
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred CC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 31 2567777777777765 4543 35677777777766542 111 1455666666655554 44 3555556
Q ss_pred CcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEccc
Q 002875 164 VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMY 243 (872)
Q Consensus 164 L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 243 (872)
|++|++++|.+++ +|..+ .+|++|++++|++++ +| .+..+++|++|++++|++++ +|.. .++|+.|++++
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~ 224 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGN 224 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCS
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcC
Confidence 6666666655553 33322 355555555555554 23 35555555555555555553 2221 13555555555
Q ss_pred ccCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCC
Q 002875 244 NEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLS 323 (872)
Q Consensus 244 n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~ 323 (872)
|.+. .+| .+..+++|++|++++|++++ +|.. ..+|+.|++++|.+.+ +|..
T Consensus 225 n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---------------------- 275 (454)
T 1jl5_A 225 NILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---------------------- 275 (454)
T ss_dssp SCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC----------------------
T ss_pred CcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc----------------------
Confidence 5555 333 25555555555555555553 2221 2445555555555442 2221
Q ss_pred CCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCC
Q 002875 324 PSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTG 368 (872)
Q Consensus 324 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 368 (872)
+++|+.|++++|++++.. . -.++|++|++++|.+.+
T Consensus 276 -----~~~L~~L~ls~N~l~~l~-~---~~~~L~~L~l~~N~l~~ 311 (454)
T 1jl5_A 276 -----PQSLTFLDVSENIFSGLS-E---LPPNLYYLNASSNEIRS 311 (454)
T ss_dssp -----CTTCCEEECCSSCCSEES-C---CCTTCCEEECCSSCCSE
T ss_pred -----cCcCCEEECcCCccCccc-C---cCCcCCEEECcCCcCCc
Confidence 245666666666665421 1 01456666666666553
No 79
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-38 Score=337.65 Aligned_cols=251 Identities=17% Similarity=0.173 Sum_probs=196.1
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeecc----chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||.+... ....+.+.+|+.++++++|||||++++++.+++..|+||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 889999999999999985 57899999998542 2235678899999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC---CC
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SF 761 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~---~~ 761 (872)
+|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 95 g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 171 (294)
T 4eqm_A 95 GPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH 171 (294)
T ss_dssp SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----------
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCc
Confidence 9999999975 468899999999999999999999 999999999999999999999999999876433221 11
Q ss_pred cccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002875 762 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 841 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (872)
..++..|.+||...+..++.++||||+||++|||+||+.||........ .............. ....+....+.+
T Consensus 172 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~l~~ 246 (294)
T 4eqm_A 172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI--AIKHIQDSVPNVTT---DVRKDIPQSLSN 246 (294)
T ss_dssp ---CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH--HHHHHSSCCCCHHH---HSCTTSCHHHHH
T ss_pred cccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhhccCCCcch---hcccCCCHHHHH
Confidence 2245668888988888889999999999999999999999875432110 00000000000000 000122346778
Q ss_pred HHHHcccCCCCCCC-CHHHHHHHHcccCCC
Q 002875 842 VALLCTRSTPSDRP-SMEEALKLLSGLKPH 870 (872)
Q Consensus 842 l~~~cl~~dp~~Rp-t~~~v~~~L~~~~~~ 870 (872)
++.+|++.||++|| +++++.+.|+.+..+
T Consensus 247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 247 VILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp HHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred HHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 99999999999998 899999999876543
No 80
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=8e-39 Score=351.25 Aligned_cols=249 Identities=21% Similarity=0.225 Sum_probs=195.0
Q ss_pred hcCcchhhhccCCCCCceeeee------cCCCcEEEEEEeeccc--hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCC-
Q 002875 607 SFNSTECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH- 676 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~------~~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~- 676 (872)
.|. ..+.||+|+||.||+|. ..+|+.||||+++... ...+.+.+|+++++++ +|||||+++++|.+.+
T Consensus 23 ~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 23 RLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GEE--EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred cee--eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 355 88999999999999996 3567899999997543 2356788999999999 7999999999998755
Q ss_pred eeEEEEcccCCCChHHHhhCC-----------------------------------------------------------
Q 002875 677 QAYLLYDYLPNGNLSEKIRTK----------------------------------------------------------- 697 (872)
Q Consensus 677 ~~~lv~ey~~~g~L~~~l~~~----------------------------------------------------------- 697 (872)
..++|||||++|+|.++++..
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 489999999999999999753
Q ss_pred ---------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC----CCccc
Q 002875 698 ---------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----SFPAK 764 (872)
Q Consensus 698 ---------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~----~~~~~ 764 (872)
.++...+.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 56778889999999999999999 999999999999999999999999999975432221 11224
Q ss_pred ccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 843 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 843 (872)
+..|.+||......++.++|||||||++|||+| |..||........ ...... .......+. ....++.+++
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~~~~---~~~~~~~~~---~~~~~l~~li 329 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLK---EGTRMRAPD---YTTPEMYQTM 329 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--HHHHHH---HTCCCCCCT---TCCHHHHHHH
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH--HHHHHH---cCCCCCCCC---CCCHHHHHHH
Confidence 455788898888888999999999999999999 8888864332111 000000 000011111 1224577889
Q ss_pred HHcccCCCCCCCCHHHHHHHHcccC
Q 002875 844 LLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 844 ~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
..||+.||++|||++|++++|+.+.
T Consensus 330 ~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 330 LDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHccCChhhCCCHHHHHHHHHHHH
Confidence 9999999999999999999998763
No 81
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1e-38 Score=335.60 Aligned_cols=247 Identities=21% Similarity=0.223 Sum_probs=186.1
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccc-----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.+|+|+||.||+|.. +|+.||||++.... ...+.+.+|++++++++||||++++++|.+++..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 788999999999999997 48999999986532 224678899999999999999999999999999999999999
Q ss_pred CCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC--------CCCeeEcccccccccccc
Q 002875 687 NGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--------NMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 687 ~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~--------~~~~ki~dfg~~~~~~~~ 757 (872)
+|+|.+++.. ..++.....++.|+++||+|||+....+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 90 ~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~ 169 (271)
T 3dtc_A 90 GGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169 (271)
T ss_dssp TEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------
T ss_pred CCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccc
Confidence 9999999975 4588889999999999999999983223999999999999986 678999999998765433
Q ss_pred CCCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002875 758 DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 837 (872)
Q Consensus 758 ~~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (872)
......++..|.+||...+..++.++||||+||++|||+||+.||........ .......... ...+ .....
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~---~~~~---~~~~~ 241 (271)
T 3dtc_A 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV--AYGVAMNKLA---LPIP---STCPE 241 (271)
T ss_dssp ------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHTSCCC---CCCC---TTCCH
T ss_pred cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHhhhcCCCC---CCCC---cccCH
Confidence 33333455668888988888889999999999999999999999875332110 0000000000 0011 11234
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 838 LVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 838 ~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
.+.+++.+||+.||++|||++|++++|+.+
T Consensus 242 ~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 242 PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 577899999999999999999999999864
No 82
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.4e-38 Score=356.77 Aligned_cols=243 Identities=19% Similarity=0.232 Sum_probs=193.3
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCC-eeEEEEcccCCCCh
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-QAYLLYDYLPNGNL 690 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lv~ey~~~g~L 690 (872)
..+.||+|+||.||+|.. .|+.||||.++... ..+.+.+|+++|++++|||||+++++|.+.+ ..|+|||||++|+|
T Consensus 197 ~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 778999999999999987 48899999997543 4567889999999999999999999987665 78999999999999
Q ss_pred HHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCCccccc
Q 002875 691 SEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 766 (872)
Q Consensus 691 ~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~~~~~~ 766 (872)
.++++.. .++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......... ....
T Consensus 275 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~-~~~~ 350 (450)
T 1k9a_A 275 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPV 350 (450)
T ss_dssp HHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-------CCCT
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC-CCCc
Confidence 9999752 47888899999999999999999 99999999999999999999999999987543222111 2234
Q ss_pred ccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002875 767 WTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 845 (872)
Q Consensus 767 ~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 845 (872)
.|.+||......++.++|||||||++|||+| |+.||........ ...+........+. .....+.+++.+
T Consensus 351 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~------~~~i~~~~~~~~p~---~~~~~l~~li~~ 421 (450)
T 1k9a_A 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV------VPRVEKGYKMDAPD---GCPPAVYDVMKN 421 (450)
T ss_dssp TTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH------HHHHHTTCCCCCCT---TCCHHHHHHHHH
T ss_pred ceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH------HHHHHcCCCCCCCC---cCCHHHHHHHHH
Confidence 4678888888889999999999999999999 8877764332111 11111111011111 223467789999
Q ss_pred cccCCCCCCCCHHHHHHHHcccCC
Q 002875 846 CTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 846 cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
||+.||++|||++|+++.|+.+..
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999987754
No 83
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=346.76 Aligned_cols=247 Identities=17% Similarity=0.148 Sum_probs=183.7
Q ss_pred hhcCcchhhhccCCCCCceeeeecC-CCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcc
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 684 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 684 (872)
+.|. ..+.||+|+||.||+|... +|+.||||+++... ..+.+.+|++++++++|||||+++++|.+++..++||||
T Consensus 53 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 53 DFFE--VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CcEE--EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 4455 7889999999999999964 68899999997543 345678899999999999999999999999999999999
Q ss_pred cCCCChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC---CCCeeEccccccccccccCC
Q 002875 685 LPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG 759 (872)
Q Consensus 685 ~~~g~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~---~~~~ki~dfg~~~~~~~~~~ 759 (872)
+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 130 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 206 (349)
T 2w4o_A 130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206 (349)
T ss_dssp CCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence 9999999999764 57888999999999999999999 9999999999999975 88999999999876543221
Q ss_pred -CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002875 760 -SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 760 -~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
....++..|.+||+..+..++.++|||||||++|||+||+.||........ ....+.........+.......+
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~ 281 (349)
T 2w4o_A 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-----MFRRILNCEYYFISPWWDEVSLN 281 (349)
T ss_dssp ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-----HHHHHHTTCCCCCTTTTTTSCHH
T ss_pred cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-----HHHHHHhCCCccCCchhhhCCHH
Confidence 122355668889998888889999999999999999999999875432110 01111111100011111223356
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 839 VLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+.+++.+||+.||++|||++|++++
T Consensus 282 ~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 282 AKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 7899999999999999999999875
No 84
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.5e-39 Score=341.54 Aligned_cols=252 Identities=17% Similarity=0.286 Sum_probs=192.8
Q ss_pred hhhhccCCCCCceeeeec-----CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecC--CeeEEEEc
Q 002875 612 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYD 683 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-----~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 683 (872)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||+++++|... ...++|||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEE
Confidence 889999999999999973 578999999997543 3356788999999999999999999999653 56899999
Q ss_pred ccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-
Q 002875 684 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 759 (872)
Q Consensus 684 y~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~- 759 (872)
|+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF 170 (295)
T ss_dssp CCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC--------
T ss_pred eCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccccCCcce
Confidence 9999999999965 368889999999999999999999 999999999999999999999999999976533221
Q ss_pred ----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCC---------CCCcccc-ccccccccccc
Q 002875 760 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS---------LQNKPID-GLLGEMYNENE 825 (872)
Q Consensus 760 ----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~---------~~~~~~~-~~~~~~~~~~~ 825 (872)
....+..+|.+||......++.++|||||||++|||+||..|+..... ....... ...........
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (295)
T 3ugc_A 171 FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250 (295)
T ss_dssp -----CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCc
Confidence 111234457788888888889999999999999999999888753210 0000000 00000001111
Q ss_pred cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 826 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 826 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
.+.+ .....++.+++.+||+.||++|||++|+++.|+.++.
T Consensus 251 ~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 251 LPRP---DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp CCCC---TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCC---cCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1111 1223567889999999999999999999999987754
No 85
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.9e-38 Score=342.83 Aligned_cols=244 Identities=16% Similarity=0.201 Sum_probs=190.9
Q ss_pred HHhhcCcchhhhccCCCCCceeeeecC-CCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCC----
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH---- 676 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~---- 676 (872)
..+.|. ..+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++++++|||||+++++|.+.+
T Consensus 4 ~~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 4 YLTDFE--PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHHEE--EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhhcCc--eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 345566 8899999999999999974 89999999997533 34677899999999999999999999986543
Q ss_pred -----------------------------------------------------eeEEEEcccCCCChHHHhhCCC-----
Q 002875 677 -----------------------------------------------------QAYLLYDYLPNGNLSEKIRTKR----- 698 (872)
Q Consensus 677 -----------------------------------------------------~~~lv~ey~~~g~L~~~l~~~~----- 698 (872)
..++|||||++|+|.+++....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 3799999999999999998643
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--------------CCCccc
Q 002875 699 DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--------------GSFPAK 764 (872)
Q Consensus 699 ~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~--------------~~~~~~ 764 (872)
.+...+.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....+
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 4566789999999999999999 99999999999999999999999999987654321 111235
Q ss_pred ccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 844 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 844 (872)
+..|.+||...+..++.++||||+||++|||+||..|+.... ......... ..+.........+.+++.
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~--------~~~~~~~~~---~~~~~~~~~~~~~~~li~ 307 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV--------RIITDVRNL---KFPLLFTQKYPQEHMMVQ 307 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH--------HHHHHHHTT---CCCHHHHHHCHHHHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH--------HHHHHhhcc---CCCcccccCChhHHHHHH
Confidence 566888998888888999999999999999999865532110 000011110 112222344456789999
Q ss_pred HcccCCCCCCCCHHHHHHH
Q 002875 845 LCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 845 ~cl~~dp~~Rpt~~~v~~~ 863 (872)
+||+.||++|||++|++++
T Consensus 308 ~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 308 DMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHCSSGGGSCCHHHHHHS
T ss_pred HHccCCCCcCCCHHHHhhc
Confidence 9999999999999999875
No 86
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.6e-37 Score=333.00 Aligned_cols=248 Identities=23% Similarity=0.368 Sum_probs=196.8
Q ss_pred hhccCCCCCceeeeecCCCcEEEEEEeecc-----chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 614 EEAARPQSAAGCKAVLPTGITVSVKKIEWG-----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 614 ~~~g~g~~~~v~~~~~~~g~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
+.||+|+||.||+|.. +|+.||||++... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 37 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 115 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115 (307)
T ss_dssp CEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred CccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence 7899999999999987 7899999998642 123567889999999999999999999999999999999999999
Q ss_pred ChHHHhhC-----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC----
Q 002875 689 NLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---- 759 (872)
Q Consensus 689 ~L~~~l~~-----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~---- 759 (872)
+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 116 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 192 (307)
T 2nru_A 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT 192 (307)
T ss_dssp BHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEEC
T ss_pred cHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEEeecccccccccccccccc
Confidence 99999863 368899999999999999999999 999999999999999999999999999875433211
Q ss_pred CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc-c-------ccccccccccccCCCCc
Q 002875 760 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-D-------GLLGEMYNENEVGSSSS 831 (872)
Q Consensus 760 ~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~ 831 (872)
....++..|.+||...+ .++.++||||+||++|||+||..||........... . ..+....+.. ....
T Consensus 193 ~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 268 (307)
T 2nru_A 193 SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKK---MNDA 268 (307)
T ss_dssp SSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSS---CSCC
T ss_pred cccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccc---cccc
Confidence 11224556778887654 467889999999999999999999875433221100 0 0001111111 1122
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 832 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 832 ~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
.......+.+++.+||+.||++|||++|++++|+.++.
T Consensus 269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 34556778899999999999999999999999998764
No 87
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=349.40 Aligned_cols=250 Identities=18% Similarity=0.190 Sum_probs=198.2
Q ss_pred hHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEE
Q 002875 603 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 603 ~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 680 (872)
++.+.|. ..+.||+|+||.||+|.. .+|+.||+|.+.... .....+.+|++++++++|||||++++++.+.+..++
T Consensus 48 ~~~~~y~--i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 48 SVYDYYD--ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp CGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccccceE--EEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 3445566 889999999999999986 578999999997543 345678899999999999999999999999999999
Q ss_pred EEcccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC--CCCeeEcccccccccc
Q 002875 681 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQ 755 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~--~~~~ki~dfg~~~~~~ 755 (872)
|||||++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 126 v~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 9999999999999975 357889999999999999999999 9999999999999974 4679999999997654
Q ss_pred ccCCC-CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002875 756 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 834 (872)
Q Consensus 756 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (872)
..... ...++..|.+||+.....++.++||||+||++|||+||..||....... ....+..............
T Consensus 203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~~ 276 (387)
T 1kob_A 203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE------TLQNVKRCDWEFDEDAFSS 276 (387)
T ss_dssp TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHCCCCCCSSTTTT
T ss_pred CCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCcccccc
Confidence 32211 1235666888999888888999999999999999999999987543211 0011110000000111122
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 835 EIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 835 ~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
...++.+++.+||+.||++|||++|++++
T Consensus 277 ~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 277 VSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 33567899999999999999999999875
No 88
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-38 Score=341.11 Aligned_cols=264 Identities=19% Similarity=0.223 Sum_probs=191.7
Q ss_pred hhHHhhcCcchhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecC----Ce
Q 002875 602 NDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR----HQ 677 (872)
Q Consensus 602 ~~~~~~~~~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~----~~ 677 (872)
..+.+.|. ..+.||+|+||.||+|+.. |+.||||++............|+.....++|||||++++++... +.
T Consensus 33 ~~~~~~y~--~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 33 RTIAKQIQ--MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp TTHHHHCE--EEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred cccccceE--EEeEeecCCCeEEEEEEEC-CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 33455676 8899999999999999874 99999999975433332333333334445999999999999876 68
Q ss_pred eEEEEcccCCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCC-----CCCcccCCCCCCCeeeCCCCCeeEcccccc
Q 002875 678 AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC-----YPAIPHGDLKASNIVFDENMEPHLAEFGFK 751 (872)
Q Consensus 678 ~~lv~ey~~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~-----~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~ 751 (872)
.|+||||+++|+|.++++. ..++.+...++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||++
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 9999999999999999975 4588899999999999999999762 458999999999999999999999999998
Q ss_pred ccccccCCC------CcccccccCchhhhcccCCccc------ccchhHHHHHHHHHcCCCC----------CCCCCCCC
Q 002875 752 YLTQLADGS------FPAKIAWTESGEFYNAMKEEMY------MDVYGFGEIILEILTNGRL----------TNAGSSLQ 809 (872)
Q Consensus 752 ~~~~~~~~~------~~~~~~~~~~~e~~~~~~~~~~------~Dv~S~Gvil~el~tg~~p----------~~~~~~~~ 809 (872)
+........ ...++..|.+||.......... +|||||||++|||+||..| +.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 654322211 2235566788888766554444 8999999999999999444 33221111
Q ss_pred Ccccccccccccc-cc-ccCCCC--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 810 NKPIDGLLGEMYN-EN-EVGSSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 810 ~~~~~~~~~~~~~-~~-~~~~~~--~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
. .. ........ .. ....+. ...+...++.+++.+||+.||++|||++|++++|+.+...
T Consensus 270 ~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 270 P-SY-EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp C-CH-HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred C-ch-hhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 0 00 00000000 00 000011 1235567788999999999999999999999999987543
No 89
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.6e-38 Score=356.68 Aligned_cols=245 Identities=17% Similarity=0.216 Sum_probs=193.8
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCChH
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 691 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L~ 691 (872)
..+.||+|+||.||+|....+..||||+++......+.+.+|+++|++++|||||++++++.+ +..|+|||||++|+|.
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 778899999999999999888899999998766667789999999999999999999999976 6789999999999999
Q ss_pred HHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCC---ccc
Q 002875 692 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 764 (872)
Q Consensus 692 ~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~---~~~ 764 (872)
++++. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......... ..+
T Consensus 267 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~ 343 (452)
T 1fmk_A 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343 (452)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------------C
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcc
Confidence 99974 368889999999999999999999 99999999999999999999999999997653322111 112
Q ss_pred ccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 843 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 843 (872)
...|.+||......++.++|||||||++|||+| |+.||.+..... ....+......+.++ .....+.+++
T Consensus 344 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l~~li 414 (452)
T 1fmk_A 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYRMPCPP---ECPESLHDLM 414 (452)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TSCHHHHHHH
T ss_pred cccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCCHHHHHHH
Confidence 334677888877788999999999999999999 777775432111 111111111011111 2234677899
Q ss_pred HHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 844 LLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 844 ~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
.+||+.||++|||++++++.|+.+..
T Consensus 415 ~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 415 CQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred HHHccCChhhCcCHHHHHHHHHHHhc
Confidence 99999999999999999999987743
No 90
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=7.9e-38 Score=342.42 Aligned_cols=244 Identities=16% Similarity=0.189 Sum_probs=193.2
Q ss_pred hcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEE
Q 002875 607 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 681 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 681 (872)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||+++++|.+.+..|+|
T Consensus 16 ~y~--i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 16 HFE--ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GEE--EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HeE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 355 889999999999999985 578999999997532 2356788899999999999999999999999999999
Q ss_pred EcccCCCChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC
Q 002875 682 YDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 759 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~ 759 (872)
|||+++|+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 9999999999999864 57888899999999999999999 999999999999999999999999999976543222
Q ss_pred -CCcccccccCchhhhcc---cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002875 760 -SFPAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 835 (872)
Q Consensus 760 -~~~~~~~~~~~~e~~~~---~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (872)
....++..|.+||++.. ..++.++||||+||++|||+||+.||........... ...+.... ...+. ..
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~---~~~~~~~~-~~~p~---~~ 243 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI---VHTFETTV-VTYPS---AW 243 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHH---HHHHHHCC-CCCCT---TS
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHH---HHHHhhcc-cCCCC---cC
Confidence 22335667888888753 3578899999999999999999999974432211111 11111110 11111 12
Q ss_pred HHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 002875 836 IKLVLDVALLCTRSTPSDRPS-MEEALK 862 (872)
Q Consensus 836 ~~~~~~l~~~cl~~dp~~Rpt-~~~v~~ 862 (872)
...+.+++.+||+.||++||+ ++++.+
T Consensus 244 s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 244 SQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 346788999999999999998 777764
No 91
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=347.25 Aligned_cols=244 Identities=21% Similarity=0.248 Sum_probs=194.1
Q ss_pred hhhhccCCCCCceeeeec--------CCCcEEEEEEeeccc--hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEE
Q 002875 612 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~--------~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 680 (872)
..+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+++++++ +|||||+++++|.+++..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 788999999999999974 334689999997543 2356788999999999 89999999999999999999
Q ss_pred EEcccCCCChHHHhhCC------------------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC
Q 002875 681 LYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 742 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~~------------------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~ 742 (872)
||||+++|+|.+++... .++.+++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 229 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNV 229 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCC
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcCCCc
Confidence 99999999999999642 57889999999999999999999 9999999999999999999
Q ss_pred eeEccccccccccccCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccc
Q 002875 743 PHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 817 (872)
Q Consensus 743 ~ki~dfg~~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~ 817 (872)
+||+|||+++....... ....++..|.+||...+..++.++|||||||++|||+| |+.||....... ..
T Consensus 230 ~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~------~~ 303 (382)
T 3tt0_A 230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------LF 303 (382)
T ss_dssp EEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HH
T ss_pred EEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH------HH
Confidence 99999999975433211 11123445788898888888999999999999999999 777776432110 01
Q ss_pred cccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 818 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
..+........+. ....++.+++.+||+.||++|||++|++++|+.+
T Consensus 304 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 304 KLLKEGHRMDKPS---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp HHHHTTCCCCCCS---SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111110011111 1234577899999999999999999999999866
No 92
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3e-38 Score=331.24 Aligned_cols=247 Identities=20% Similarity=0.265 Sum_probs=198.8
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCChH
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 691 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L~ 691 (872)
..+.+|+|+||.||+|...+++.||||++.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 78899999999999999888999999999876666678899999999999999999999999999999999999999999
Q ss_pred HHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC---CCCcccc
Q 002875 692 EKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 765 (872)
Q Consensus 692 ~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~---~~~~~~~ 765 (872)
+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 168 (267)
T 3t9t_A 92 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 168 (267)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred HHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccccccccc
Confidence 999753 57888999999999999999999 99999999999999999999999999987543211 1111233
Q ss_pred cccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002875 766 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 844 (872)
Q Consensus 766 ~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 844 (872)
..|.+||......++.++||||+||++|||+| |+.||....... ....+........+. .....+.+++.
T Consensus 169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l~~li~ 239 (267)
T 3t9t_A 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFRLYKPR---LASTHVYQIMN 239 (267)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTCCCCCCT---TSCHHHHHHHH
T ss_pred ccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH------HHHHHhcCCcCCCCc---cCcHHHHHHHH
Confidence 45778888887788899999999999999999 677765432110 011111110000011 11245778999
Q ss_pred HcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 845 LCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 845 ~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
+||+.||++|||++|++++|+.+...
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 240 HCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999887543
No 93
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.9e-38 Score=340.22 Aligned_cols=243 Identities=16% Similarity=0.170 Sum_probs=191.1
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch--hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.++++++|||||++++++.+++..|+|||||++|
T Consensus 11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 889999999999999986 4899999999965432 2456789999999999999999999999999999999999999
Q ss_pred ChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC----CCCc
Q 002875 689 NLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----GSFP 762 (872)
Q Consensus 689 ~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~----~~~~ 762 (872)
+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 91 ~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 167 (323)
T 3tki_A 91 ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167 (323)
T ss_dssp EGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSC
T ss_pred cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCC
Confidence 999999764 57889999999999999999999 99999999999999999999999999997543221 1122
Q ss_pred ccccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002875 763 AKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 841 (872)
Q Consensus 763 ~~~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (872)
.++..|.+||......+ +.++||||+||++|||+||+.||.......... ....... . ...........+.+
T Consensus 168 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-----~~~~~~~-~-~~~~~~~~~~~~~~ 240 (323)
T 3tki_A 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-----SDWKEKK-T-YLNPWKKIDSAPLA 240 (323)
T ss_dssp CSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH-----HHHHTTC-T-TSTTGGGSCHHHHH
T ss_pred ccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH-----HHHhccc-c-cCCccccCCHHHHH
Confidence 35566788888766554 778999999999999999999997543221100 0000000 0 01111223346778
Q ss_pred HHHHcccCCCCCCCCHHHHHHHH
Q 002875 842 VALLCTRSTPSDRPSMEEALKLL 864 (872)
Q Consensus 842 l~~~cl~~dp~~Rpt~~~v~~~L 864 (872)
++.+||+.||++|||++|++++-
T Consensus 241 li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 241 LLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTCT
T ss_pred HHHHHccCChhhCcCHHHHhhCh
Confidence 99999999999999999998753
No 94
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.6e-38 Score=345.39 Aligned_cols=245 Identities=15% Similarity=0.120 Sum_probs=191.2
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch----hHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~----~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|..++.++ +|||||++++++.+++..|+|||||
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~ 135 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 135 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcC
Confidence 889999999999999985 5688999999975422 234577888888876 8999999999999999999999999
Q ss_pred CCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc--CCCC
Q 002875 686 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA--DGSF 761 (872)
Q Consensus 686 ~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~--~~~~ 761 (872)
++|+|.+++.. ..++.+...++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 136 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~ 212 (396)
T 4dc2_A 136 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 212 (396)
T ss_dssp TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCC
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCCCcccc
Confidence 99999999875 468888999999999999999999 9999999999999999999999999999753221 1222
Q ss_pred cccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCc---cccccccccccccccCCCCchHHHHHH
Q 002875 762 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---PIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
..++..|.+||+..+..++.++||||+||++|||+||+.||......... ........+.... ...+. ....+
T Consensus 213 ~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~---~~s~~ 288 (396)
T 4dc2_A 213 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPR---SLSVK 288 (396)
T ss_dssp CCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-CCCCT---TSCHH
T ss_pred ccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-cCCCC---cCCHH
Confidence 34667788999998888999999999999999999999999643211110 0000111111111 11111 12346
Q ss_pred HHHHHHHcccCCCCCCCCH------HHHHHH
Q 002875 839 VLDVALLCTRSTPSDRPSM------EEALKL 863 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~------~~v~~~ 863 (872)
+.+++.+||+.||++||++ +|++++
T Consensus 289 ~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 289 AASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp HHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred HHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 7789999999999999985 677654
No 95
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=341.82 Aligned_cols=255 Identities=20% Similarity=0.248 Sum_probs=190.0
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEec-----CCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-----RHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-----~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|+. +|+.||||++...........+|+..+..++||||+++++++.. ....++|||||+
T Consensus 17 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~ 95 (336)
T 3g2f_A 17 LLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYP 95 (336)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCT
T ss_pred eeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCC
Confidence 889999999999999976 78999999997544333333445555667899999999986642 336789999999
Q ss_pred CCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCC------CCCcccCCCCCCCeeeCCCCCeeEccccccccccccC-
Q 002875 687 NGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC------YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD- 758 (872)
Q Consensus 687 ~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~------~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~- 758 (872)
+|+|.+++.. ..++.....++.|+++||+|||+.+ .++|+||||||+||+++.++.+||+|||+++......
T Consensus 96 ~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~ 175 (336)
T 3g2f_A 96 NGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175 (336)
T ss_dssp TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSC
T ss_pred CCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccc
Confidence 9999999975 4588889999999999999999873 3489999999999999999999999999997543211
Q ss_pred ---------CCCcccccccCchhhhcc-------cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccc------
Q 002875 759 ---------GSFPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGL------ 816 (872)
Q Consensus 759 ---------~~~~~~~~~~~~~e~~~~-------~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~------ 816 (872)
.....++..|.+||...+ ..++.++|||||||++|||+||+.|+..+...........
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3g2f_A 176 VRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNH 255 (336)
T ss_dssp C---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSS
T ss_pred cCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCC
Confidence 011224566788887765 4566789999999999999999888775543222111000
Q ss_pred ----------ccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 817 ----------LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 817 ----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
......+..............++.+++.+||+.||++|||++|+++.|+.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 256 PTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred chHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 000000110111111233556788999999999999999999999999865
No 96
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5.7e-38 Score=335.53 Aligned_cols=247 Identities=16% Similarity=0.211 Sum_probs=188.6
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeecc---chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
..+.||+|+||.||+|... ..+|||.++.. ....+.+.+|++++++++|||||++++++.. +..++||||+++|
T Consensus 40 ~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 40 LSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSC
T ss_pred EEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEecCCCC
Confidence 7889999999999999864 36899988653 2345678899999999999999999998754 5689999999999
Q ss_pred ChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC----CCC
Q 002875 689 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----GSF 761 (872)
Q Consensus 689 ~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~----~~~ 761 (872)
+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 117 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~ 193 (307)
T 3lb7_A 117 SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193 (307)
T ss_dssp BHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC------------
T ss_pred cHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccC
Confidence 99999964 457889999999999999999999 99999999999999999999999999987543211 112
Q ss_pred cccccccCchhhhc---ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002875 762 PAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 762 ~~~~~~~~~~e~~~---~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
..++..|.+||... ...++.++|||||||++|||+||+.||......... ..........+. . ..........
T Consensus 194 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-~~~~~~~~~~~~-~--~~~~~~~~~~ 269 (307)
T 3lb7_A 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI-IFMVGRGYASPD-L--SKLYKNCPKA 269 (307)
T ss_dssp CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHHHHHTCCCCC-S--TTSCSSSCHH
T ss_pred CCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH-HHHHhcCCCCcc-h--hhhhcCCcHH
Confidence 23556678888775 456788999999999999999999998754321110 000000111111 0 1111122346
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 839 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
+.+++.+||+.||++|||++|++++|+.++
T Consensus 270 l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 270 MKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp HHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 778999999999999999999999998664
No 97
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=344.90 Aligned_cols=239 Identities=17% Similarity=0.137 Sum_probs=190.4
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+.+++++ +|||||++++++.+.+..|+|||||
T Consensus 27 ~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~ 106 (353)
T 3txo_A 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFV 106 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCC
Confidence 889999999999999985 579999999997532 2355677889999887 6999999999999999999999999
Q ss_pred CCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--CCC
Q 002875 686 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSF 761 (872)
Q Consensus 686 ~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~--~~~ 761 (872)
++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 107 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 183 (353)
T 3txo_A 107 NGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT 183 (353)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-------
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccCCccccc
Confidence 99999999965 568888999999999999999999 99999999999999999999999999987532221 122
Q ss_pred cccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002875 762 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 841 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (872)
..++..|.+||+..+..++.++||||+||++|||+||+.||...... .....+.... ...+. .....+.+
T Consensus 184 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~~~~~~~ 253 (353)
T 3txo_A 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED------DLFEAILNDE-VVYPT---WLHEDATG 253 (353)
T ss_dssp --CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSCHHHHH
T ss_pred cCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCCHHHHH
Confidence 33567788999988888899999999999999999999999754321 1111111111 11111 12245778
Q ss_pred HHHHcccCCCCCCCCH------HHHHHH
Q 002875 842 VALLCTRSTPSDRPSM------EEALKL 863 (872)
Q Consensus 842 l~~~cl~~dp~~Rpt~------~~v~~~ 863 (872)
++.+||+.||++||++ +|++++
T Consensus 254 li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 254 ILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred HHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 9999999999999998 777653
No 98
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.1e-37 Score=332.99 Aligned_cols=248 Identities=18% Similarity=0.252 Sum_probs=180.5
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch--hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..++||||++ |
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 889999999999999986 5799999999975432 34677889999999999999999999999999999999998 6
Q ss_pred ChHHHhhC--------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-
Q 002875 689 NLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 759 (872)
Q Consensus 689 ~L~~~l~~--------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~- 759 (872)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence 99998853 357888899999999999999999 999999999999999999999999999876533221
Q ss_pred -CCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCC---------------cccccccccccc
Q 002875 760 -SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYN 822 (872)
Q Consensus 760 -~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~---------------~~~~~~~~~~~~ 822 (872)
....++.+|.+||...+ ..++.++||||+||++|||+||+.||........ +...........
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 244 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP 244 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCT
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhccc
Confidence 12234566788888765 4678899999999999999999999875432100 000000000000
Q ss_pred ccccCCCCchH---------HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 823 ENEVGSSSSLQ---------DEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 823 ~~~~~~~~~~~---------~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
........... ....++.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp TCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00000000000 123467899999999999999999999865
No 99
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.9e-38 Score=341.94 Aligned_cols=246 Identities=17% Similarity=0.186 Sum_probs=178.1
Q ss_pred hhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccC-CCCceeEEEEEecCCeeEEEEcccCCCCh
Q 002875 613 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNL 690 (872)
Q Consensus 613 ~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~g~L 690 (872)
.+.||+|+||.||+|.. .+|+.||||++... ....+.+|+.++++++ |||||++++++.+++..|+|||||++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 46799999999999986 57899999999743 3456778999999997 99999999999999999999999999999
Q ss_pred HHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC---CeeEccccccccccccCC--CCcc
Q 002875 691 SEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFKYLTQLADG--SFPA 763 (872)
Q Consensus 691 ~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~---~~ki~dfg~~~~~~~~~~--~~~~ 763 (872)
.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++....... ....
T Consensus 94 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 9999764 57888999999999999999999 999999999999997665 799999999975433221 1223
Q ss_pred cccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCc-cccccccccccccccCCCCchHHHHHHHHHH
Q 002875 764 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-PIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 842 (872)
Q Consensus 764 ~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 842 (872)
++..|.+||......++.++||||+||++|||+||+.||......... ........+.........+.......++.++
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 250 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHH
Confidence 456688889988888999999999999999999999999754321110 0111111111111111111223345678899
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 002875 843 ALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 843 ~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+.+||+.||++|||++|++++
T Consensus 251 i~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 251 IQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHCCCChhHCCCHHHHhcC
Confidence 999999999999999998754
No 100
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.3e-38 Score=338.63 Aligned_cols=247 Identities=19% Similarity=0.234 Sum_probs=195.5
Q ss_pred hhhhccCCCCCceeeeec------CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEc
Q 002875 612 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~------~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 683 (872)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 788999999999999974 456899999997542 345678899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhCC--------------------------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee
Q 002875 684 YLPNGNLSEKIRTK--------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 737 (872)
Q Consensus 684 y~~~g~L~~~l~~~--------------------------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill 737 (872)
|+++|+|.+++... .++.+.+.++.|+++||+|||+. +|+||||||+||++
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~NIli 183 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILV 183 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchheEEE
Confidence 99999999999642 46778899999999999999999 99999999999999
Q ss_pred CCCCCeeEccccccccccccCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcc
Q 002875 738 DENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 812 (872)
Q Consensus 738 ~~~~~~ki~dfg~~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~ 812 (872)
+.++.+||+|||+++....... ....+...|.+||...+..++.++||||+||++|||+| |+.||.......
T Consensus 184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 260 (314)
T 2ivs_A 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260 (314)
T ss_dssp ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence 9999999999999875432221 11123345778888877778899999999999999999 888876433211
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 813 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
....+........+ ......+.+++.+||+.||++|||++|++++|+++...
T Consensus 261 ---~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 261 ---LFNLLKTGHRMERP---DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp ---HHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---HHHHhhcCCcCCCC---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 00011111001111 12234677899999999999999999999999877543
No 101
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-38 Score=341.54 Aligned_cols=247 Identities=21% Similarity=0.238 Sum_probs=196.1
Q ss_pred hhhhccCCCCCceeeeec------CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEc
Q 002875 612 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~------~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 683 (872)
..+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+.++++++||||++++++|.+.+..|+|||
T Consensus 51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEe
Confidence 788999999999999986 345899999997543 235678999999999999999999999999999999999
Q ss_pred ccCCCChHHHhhC--------------------------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee
Q 002875 684 YLPNGNLSEKIRT--------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 737 (872)
Q Consensus 684 y~~~g~L~~~l~~--------------------------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill 737 (872)
|+++|+|.+++.. ..++.+++.++.|+++||+|||+. +|+||||||+||++
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLV 207 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEE
Confidence 9999999999864 357788899999999999999999 99999999999999
Q ss_pred CCCCCeeEccccccccccccCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcc
Q 002875 738 DENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 812 (872)
Q Consensus 738 ~~~~~~ki~dfg~~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~ 812 (872)
+.++.+||+|||+++....... ....++..|.+||......++.++|||||||++|||+| |..||.......
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 284 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE--- 284 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH---
Confidence 9999999999999865432211 11223445778888877788999999999999999999 877876432111
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 813 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
....+.+......+. .....+.+++.+||+.||++|||++|++++|+.+...
T Consensus 285 ---~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 285 ---VIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp ---HHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred ---HHHHHhCCCcCCCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 011111111011111 1234677899999999999999999999999988653
No 102
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.5e-38 Score=332.99 Aligned_cols=247 Identities=19% Similarity=0.250 Sum_probs=188.6
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccch---hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
..+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++|||||++++++.+++..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 7889999999999999998899999999965432 246778999999999999999999999999999999999985
Q ss_pred ChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--CCcc
Q 002875 689 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPA 763 (872)
Q Consensus 689 ~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--~~~~ 763 (872)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 161 (288)
T 1ob3_A 85 DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161 (288)
T ss_dssp EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccccc
Confidence 99998865 357888899999999999999999 999999999999999999999999999875432211 1122
Q ss_pred cccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCC---------------Cccccccccccccccc--
Q 002875 764 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEMYNENE-- 825 (872)
Q Consensus 764 ~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~-- 825 (872)
++..|.+||...+ ..++.++||||+||++|||+||+.||....... .++....... +++..
T Consensus 162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 240 (288)
T 1ob3_A 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK-YDPNFTV 240 (288)
T ss_dssp CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT-CCTTCCC
T ss_pred ccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc-ccccccc
Confidence 4556778887754 457899999999999999999999987432110 0000000000 00000
Q ss_pred ---cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 826 ---VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 826 ---~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
............++.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000011223567799999999999999999999865
No 103
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.6e-38 Score=351.21 Aligned_cols=244 Identities=15% Similarity=0.082 Sum_probs=192.4
Q ss_pred chhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEccc
Q 002875 611 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
...+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+.+++.++|||||+++++|.+++..|+|||||
T Consensus 72 ~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~ 151 (410)
T 3v8s_A 72 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYM 151 (410)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 3888999999999999986 568999999997532 22445788999999999999999999999999999999999
Q ss_pred CCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC---CCC
Q 002875 686 PNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSF 761 (872)
Q Consensus 686 ~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~---~~~ 761 (872)
++|+|.++++. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 152 ~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 228 (410)
T 3v8s_A 152 PGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228 (410)
T ss_dssp TTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCS
T ss_pred CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccC
Confidence 99999999975 457888899999999999999999 99999999999999999999999999997643321 122
Q ss_pred cccccccCchhhhcccC----CcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002875 762 PAKIAWTESGEFYNAMK----EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 837 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~----~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (872)
..++..|.+||+..... ++.++||||+||++|||+||+.||.+..... ....+.........+.......
T Consensus 229 ~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~p~~~~~s~ 302 (410)
T 3v8s_A 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMNHKNSLTFPDDNDISK 302 (410)
T ss_dssp CCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCCCCTTCCCCH
T ss_pred CcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh------HHHHHHhccccccCCCcccccH
Confidence 34566788889876544 7789999999999999999999997543211 1111111000000111111234
Q ss_pred HHHHHHHHcccCCCCC--CCCHHHHHHH
Q 002875 838 LVLDVALLCTRSTPSD--RPSMEEALKL 863 (872)
Q Consensus 838 ~~~~l~~~cl~~dp~~--Rpt~~~v~~~ 863 (872)
++.+++.+||..+|++ ||+++|+++|
T Consensus 303 ~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 303 EAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred HHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 6778899999999988 9999999876
No 104
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.3e-38 Score=342.72 Aligned_cols=238 Identities=18% Similarity=0.171 Sum_probs=191.1
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+..|..+++++ +|||||++++++.+.+..|+||||+
T Consensus 21 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~ 100 (345)
T 1xjd_A 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYL 100 (345)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 889999999999999986 579999999997542 2345677788888876 8999999999999999999999999
Q ss_pred CCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--CCC
Q 002875 686 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSF 761 (872)
Q Consensus 686 ~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~--~~~ 761 (872)
++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 101 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 177 (345)
T 1xjd_A 101 NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT 177 (345)
T ss_dssp TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCC
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccC
Confidence 99999999975 568889999999999999999999 99999999999999999999999999987532211 122
Q ss_pred cccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002875 762 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 841 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (872)
..++..|.+||+..+..++.++||||+||++|||+||+.||....... ....+.... ...+. ....++.+
T Consensus 178 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~---~~s~~~~~ 247 (345)
T 1xjd_A 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE------LFHSIRMDN-PFYPR---WLEKEAKD 247 (345)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCT---TSCHHHHH
T ss_pred CCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHhCC-CCCCc---ccCHHHHH
Confidence 335667889999888888999999999999999999999987543211 111111111 11111 12346778
Q ss_pred HHHHcccCCCCCCCCHH-HHHH
Q 002875 842 VALLCTRSTPSDRPSME-EALK 862 (872)
Q Consensus 842 l~~~cl~~dp~~Rpt~~-~v~~ 862 (872)
++.+||+.||++||++. |+.+
T Consensus 248 li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 248 LLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGG
T ss_pred HHHHHhcCCHhHcCCChHHHHc
Confidence 99999999999999997 6653
No 105
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.8e-39 Score=344.15 Aligned_cols=252 Identities=18% Similarity=0.203 Sum_probs=177.5
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhc--cCCCCceeEEEEEecCC----eeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGT--VRHKNLIRLLGFCYNRH----QAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~~lv~ey~ 685 (872)
..+.||+|+||.||+|+. +|+.||||+++.. ..+.+.+|.+++.. ++||||+++++++.+.+ ..++||||+
T Consensus 7 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp CCEEEEECSSSEEEEC-C-TTSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred ehhhccCCCCeEEEEEEE-cCcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEecc
Confidence 788999999999999987 5999999998743 33455667777776 79999999999998766 789999999
Q ss_pred CCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHh--------hCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccc
Q 002875 686 PNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 756 (872)
Q Consensus 686 ~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH--------~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~ 756 (872)
++|+|.+++.. ..++.+...++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~ 160 (303)
T 3gxj_A 84 EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp TTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEET
T ss_pred CCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecCcceeccC
Confidence 99999999975 4577888999999999999999 66 999999999999999999999999999865433
Q ss_pred cCCC------CcccccccCchhhhccc------CCcccccchhHHHHHHHHHcC----------CCCCCCCCCCCCcccc
Q 002875 757 ADGS------FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNAGSSLQNKPID 814 (872)
Q Consensus 757 ~~~~------~~~~~~~~~~~e~~~~~------~~~~~~Dv~S~Gvil~el~tg----------~~p~~~~~~~~~~~~~ 814 (872)
.... ...++..|.+||..... .++.++|||||||++|||+|| ..||........ ...
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~-~~~ 239 (303)
T 3gxj_A 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP-SVE 239 (303)
T ss_dssp TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC-CCC
T ss_pred CCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc-cHH
Confidence 2211 11345567888887654 344679999999999999999 445443211110 000
Q ss_pred ccccccccccccCC-CC--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 815 GLLGEMYNENEVGS-SS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 815 ~~~~~~~~~~~~~~-~~--~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
............+. +. ...+....+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 240 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp -CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred HHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 00011111110000 11 1125566788999999999999999999999999988764
No 106
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.6e-38 Score=341.41 Aligned_cols=248 Identities=10% Similarity=0.020 Sum_probs=194.9
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEEcccCCCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 689 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~g~ 689 (872)
..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|+++++++ +||||+++++++.+.+..++||||+ +|+
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (330)
T 2izr_A 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPS 90 (330)
T ss_dssp EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCC
Confidence 788999999999999985 789999999987543 234578899999999 9999999999999999999999999 999
Q ss_pred hHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC-----eeEccccccccccccCC--
Q 002875 690 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-----PHLAEFGFKYLTQLADG-- 759 (872)
Q Consensus 690 L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~-----~ki~dfg~~~~~~~~~~-- 759 (872)
|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.......
T Consensus 91 L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~ 167 (330)
T 2izr_A 91 LEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKK 167 (330)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCC
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCc
Confidence 9999873 568999999999999999999999 9999999999999998887 99999999976433221
Q ss_pred -------CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002875 760 -------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 832 (872)
Q Consensus 760 -------~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (872)
....++..|.+||...+..++.++|||||||++|||+||+.||......... .....+.........+..
T Consensus 168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~---~~~~~i~~~~~~~~~~~~ 244 (330)
T 2izr_A 168 HIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK---ERYQKIGDTKRATPIEVL 244 (330)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH---HHHHHHHHHHHHSCHHHH
T ss_pred cccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH---HHHHHHHhhhccCCHHHH
Confidence 1223556688899988888899999999999999999999999754321110 111111110000000000
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 833 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 833 ~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
.+...++.+++..||+.||.+||+++++.+.|+.+
T Consensus 245 ~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 245 CENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp TTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 01112788999999999999999999999998754
No 107
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=8.1e-38 Score=337.19 Aligned_cols=251 Identities=19% Similarity=0.169 Sum_probs=198.8
Q ss_pred hhHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch-------hHHHHHHHHHHhhccCCCCceeEEEEEe
Q 002875 602 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCY 673 (872)
Q Consensus 602 ~~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~~~~~ 673 (872)
..+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|+.++++++||||+++++++.
T Consensus 8 ~~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 85 (321)
T 2a2a_A 8 QKVEDFYD--IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE 85 (321)
T ss_dssp SCHHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhccEE--EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 34556666 889999999999999986 5799999999975321 3567889999999999999999999999
Q ss_pred cCCeeEEEEcccCCCChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC----CeeEcc
Q 002875 674 NRHQAYLLYDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAE 747 (872)
Q Consensus 674 ~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~----~~ki~d 747 (872)
+.+..++||||+++|+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred cCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 999999999999999999999764 46888899999999999999999 999999999999999887 799999
Q ss_pred ccccccccccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccccccc
Q 002875 748 FGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 826 (872)
Q Consensus 748 fg~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (872)
||+++....... ....++..|.+||...+..++.++||||+||++|||+||+.||....... ....+......
T Consensus 163 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~~ 236 (321)
T 2a2a_A 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITSVSYD 236 (321)
T ss_dssp CTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCCC
T ss_pred CccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcccc
Confidence 999876543222 22235566888898888888999999999999999999999987533111 01111110000
Q ss_pred CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 827 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 827 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
............+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000011223467889999999999999999999875
No 108
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-38 Score=334.98 Aligned_cols=238 Identities=17% Similarity=0.160 Sum_probs=194.0
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+.++++++|||||++++++.+.+..|+||||++
T Consensus 10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 889999999999999986 579999999997532 235667889999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCCccc
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 764 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~~~~ 764 (872)
+|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ...+
T Consensus 90 gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~-~~~g 165 (318)
T 1fot_A 90 GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY-TLCG 165 (318)
T ss_dssp SCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC-CCCS
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCccc-cccC
Confidence 9999999975 457888899999999999999999 999999999999999999999999999976543222 2235
Q ss_pred ccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 844 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 844 (872)
+..|.+||...+..++.++||||+||++|||+||+.||.+..... ....+.... ...++. ...++.+++.
T Consensus 166 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~-~~~p~~---~~~~~~~li~ 235 (318)
T 1fot_A 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK------TYEKILNAE-LRFPPF---FNEDVKDLLS 235 (318)
T ss_dssp CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHCC-CCCCTT---SCHHHHHHHH
T ss_pred CccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCCC---CCHHHHHHHH
Confidence 566888898888888999999999999999999999997543211 111111111 111111 2245778899
Q ss_pred HcccCCCCCCC-----CHHHHHHH
Q 002875 845 LCTRSTPSDRP-----SMEEALKL 863 (872)
Q Consensus 845 ~cl~~dp~~Rp-----t~~~v~~~ 863 (872)
+|++.||++|| +++|++++
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhccCHHHcCCCcCCCHHHHhcC
Confidence 99999999999 89998754
No 109
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.5e-37 Score=350.51 Aligned_cols=252 Identities=19% Similarity=0.218 Sum_probs=191.8
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc---chhHHHHHHHHHHhhccCCCCceeEEEEEecC------
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------ 675 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------ 675 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++++++|||||++++++...
T Consensus 62 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 62 KRYQ--NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp TTEE--EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred CCeE--EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 4455 889999999999999984 67999999999753 23456778999999999999999999999754
Q ss_pred CeeEEEEcccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccc
Q 002875 676 HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 755 (872)
Q Consensus 676 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~ 755 (872)
...|+|||||++ ++.+.+....++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred CeEEEEEeCCCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 357999999975 68888888889999999999999999999999 99999999999999999999999999997654
Q ss_pred ccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc-------------c---cccc
Q 002875 756 LADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-------------D---GLLG 818 (872)
Q Consensus 756 ~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~-------------~---~~~~ 818 (872)
.... ....++.+|.+||+..+..++.++||||+||++|||++|+.||.+......+.. . ....
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 3322 222366778999998888899999999999999999999999975432110000 0 0000
Q ss_pred cccccc---------------ccCC-CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 819 EMYNEN---------------EVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 819 ~~~~~~---------------~~~~-~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
...... .... .........++.+++.+||+.||++|||++|++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 0000 00112235678899999999999999999999875
No 110
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=335.39 Aligned_cols=241 Identities=15% Similarity=0.147 Sum_probs=184.8
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch---------------------------hHHHHHHHHHHhhccCCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------------------------RIKIVSEFITRIGTVRHK 663 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~---------------------------~~~~~~~e~~~l~~l~H~ 663 (872)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||
T Consensus 17 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 96 (298)
T 2zv2_A 17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP 96 (298)
T ss_dssp EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCT
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCC
Confidence 889999999999999985 6789999999965321 135678999999999999
Q ss_pred CceeEEEEEec--CCeeEEEEcccCCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC
Q 002875 664 NLIRLLGFCYN--RHQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 740 (872)
Q Consensus 664 niv~l~~~~~~--~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~ 740 (872)
|||++++++.+ .+..|+||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 173 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGED 173 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTT
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCC
Confidence 99999999986 5689999999999999987654 468889999999999999999999 99999999999999999
Q ss_pred CCeeEccccccccccccCC--CCcccccccCchhhhcccC---CcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccc
Q 002875 741 MEPHLAEFGFKYLTQLADG--SFPAKIAWTESGEFYNAMK---EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG 815 (872)
Q Consensus 741 ~~~ki~dfg~~~~~~~~~~--~~~~~~~~~~~~e~~~~~~---~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~ 815 (872)
+.+||+|||+++....... ....++..|.+||...... ++.++||||+||++|||+||+.||.......
T Consensus 174 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------ 247 (298)
T 2zv2_A 174 GHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC------ 247 (298)
T ss_dssp SCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------
T ss_pred CCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH------
Confidence 9999999999876543221 1223556677888776543 3677899999999999999999987432110
Q ss_pred cccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 816 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
....+.... .. .+.......++.+++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~~~~-~~-~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 248 LHSKIKSQA-LE-FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HHHHHHHCC-CC-CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HHHHHhccc-CC-CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 000000000 00 00001122457789999999999999999999764
No 111
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2e-37 Score=328.65 Aligned_cols=244 Identities=21% Similarity=0.274 Sum_probs=189.0
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccchh--------HHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEE
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR--------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~--------~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 682 (872)
..+.+|+|+||.||+|.. .+|+.||||++...... .+.+.+|+.++++++||||+++++++.+.. ++||
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~ 100 (287)
T 4f0f_A 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVM 100 (287)
T ss_dssp EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEE
T ss_pred ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEE
Confidence 788999999999999986 68999999998643221 167889999999999999999999997655 6999
Q ss_pred cccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCC--cccCCCCCCCeeeCCCCC-----eeEccccccc
Q 002875 683 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENME-----PHLAEFGFKY 752 (872)
Q Consensus 683 ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~--i~Hrdlk~~Nill~~~~~-----~ki~dfg~~~ 752 (872)
||+++|+|.+++.. ..++.....++.|++.||+|||+. + |+||||||+||+++.++. +||+|||+++
T Consensus 101 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp ECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred EecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 99999999998854 358899999999999999999998 7 999999999999987776 9999999987
Q ss_pred cccccCCCCcccccccCchhhh--cccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002875 753 LTQLADGSFPAKIAWTESGEFY--NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 830 (872)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~e~~--~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (872)
....... ...++..|.+||.. ....++.++||||+||++|||+||+.||....................+. .+
T Consensus 178 ~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~- 252 (287)
T 4f0f_A 178 QSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT---IP- 252 (287)
T ss_dssp CCSSCEE-CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC---CC-
T ss_pred ccccccc-ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC---CC-
Confidence 5432211 12245567788877 34456788999999999999999999987543211100000000000110 11
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 831 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 831 ~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
......+.+++.+||+.||++|||++|+++.|+++
T Consensus 253 --~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 253 --EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred --cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 12234678899999999999999999999999864
No 112
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.7e-37 Score=330.00 Aligned_cols=249 Identities=20% Similarity=0.237 Sum_probs=189.1
Q ss_pred chhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 611 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++.+++..++||||++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 84 (292)
T 3o0g_A 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD 84 (292)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC
Confidence 3788999999999999986 578999999997533 234677899999999999999999999999999999999998
Q ss_pred CCChHHHhh---CCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--CC
Q 002875 687 NGNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 761 (872)
Q Consensus 687 ~g~L~~~l~---~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--~~ 761 (872)
+ ++.+.+. ...++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 85 ~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (292)
T 3o0g_A 85 Q-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA 160 (292)
T ss_dssp E-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCS
T ss_pred C-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccC
Confidence 6 5555553 2468889999999999999999999 999999999999999999999999999976543221 22
Q ss_pred cccccccCchhhhcccC-CcccccchhHHHHHHHHHcCCCCCCCCCCCCCc----------------ccccccccccccc
Q 002875 762 PAKIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK----------------PIDGLLGEMYNEN 824 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~-~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~----------------~~~~~~~~~~~~~ 824 (872)
..++.+|.+||...+.. ++.++||||+||++|||+||+.|+..+...... .............
T Consensus 161 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (292)
T 3o0g_A 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240 (292)
T ss_dssp CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC
T ss_pred CccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccc
Confidence 23456678888876554 789999999999999999999997644321110 0000000000000
Q ss_pred ----ccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 825 ----EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 825 ----~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
........+.....+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000112234567799999999999999999999875
No 113
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=9.4e-38 Score=351.15 Aligned_cols=239 Identities=15% Similarity=0.200 Sum_probs=192.9
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch----hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+.++++++|||||++++++.+.+..|+|||||+
T Consensus 20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 788999999999999986 4899999999975422 24578899999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-CCcc
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 763 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~-~~~~ 763 (872)
+|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 100 gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~ 176 (476)
T 2y94_A 100 GGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 176 (476)
T ss_dssp SEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCC
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccccccccC
Confidence 9999999975 357888999999999999999999 999999999999999999999999999976543221 2233
Q ss_pred cccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002875 764 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 842 (872)
Q Consensus 764 ~~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 842 (872)
++..|.+||...+..+ +.++||||+||++|||+||+.||.+..... ....+.... ...+. .....+.++
T Consensus 177 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~------~~~~i~~~~-~~~p~---~~s~~~~~L 246 (476)
T 2y94_A 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT------LFKKICDGI-FYTPQ---YLNPSVISL 246 (476)
T ss_dssp SCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH------HHHHHHTTC-CCCCT---TCCHHHHHH
T ss_pred CCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH------HHHHHhcCC-cCCCc---cCCHHHHHH
Confidence 5667888898876554 678999999999999999999987543211 111111111 00011 122457789
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 002875 843 ALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 843 ~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+.+||+.||++|||++|++++
T Consensus 247 i~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHcCCCchhCcCHHHHHhC
Confidence 999999999999999999864
No 114
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=333.42 Aligned_cols=245 Identities=23% Similarity=0.295 Sum_probs=187.2
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCChH
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 691 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L~ 691 (872)
..+.||+|+||.||+|.. .|+.||||++... ...+.+.+|++++++++|||||+++|++.+ ..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEEECCSSSEEEEEEE-TTEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBHH
T ss_pred eeeEeecCCCceEEEEEE-CCeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCHH
Confidence 788999999999999987 4889999999643 345678899999999999999999998874 479999999999999
Q ss_pred HHhhCC-----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC-eeEccccccccccccCCCCcccc
Q 002875 692 EKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-PHLAEFGFKYLTQLADGSFPAKI 765 (872)
Q Consensus 692 ~~l~~~-----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~-~ki~dfg~~~~~~~~~~~~~~~~ 765 (872)
+++... .++.....++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++........ ...++
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~-~~~gt 166 (307)
T 2eva_A 88 NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT-NNKGS 166 (307)
T ss_dssp HHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------CC
T ss_pred HHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccc-cCCCC
Confidence 999763 367888999999999999999943239999999999999998886 79999999865433221 12345
Q ss_pred cccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002875 766 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 845 (872)
Q Consensus 766 ~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 845 (872)
..|.+||...+..++.++|||||||++|||+||+.||.......... ......... .+........+.+++.+
T Consensus 167 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~l~~li~~ 239 (307)
T 2eva_A 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI----MWAVHNGTR---PPLIKNLPKPIESLMTR 239 (307)
T ss_dssp TTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH----HHHHHTTCC---CCCBTTCCHHHHHHHHH
T ss_pred CceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH----HHHHhcCCC---CCcccccCHHHHHHHHH
Confidence 56788898888888999999999999999999999987432211000 000000000 01111223457789999
Q ss_pred cccCCCCCCCCHHHHHHHHcccC
Q 002875 846 CTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 846 cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
||+.||++|||++|++++|+.+.
T Consensus 240 ~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 240 CWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHG
T ss_pred HhcCChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999998664
No 115
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1e-37 Score=338.34 Aligned_cols=245 Identities=15% Similarity=0.120 Sum_probs=191.5
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+.+++++ +|||||++++++.+.+..|+||||+
T Consensus 13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~ 92 (345)
T 3a8x_A 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 92 (345)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCC
Confidence 889999999999999986 578999999997542 2345678899999887 8999999999999999999999999
Q ss_pred CCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--CCC
Q 002875 686 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSF 761 (872)
Q Consensus 686 ~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~--~~~ 761 (872)
++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 93 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~ 169 (345)
T 3a8x_A 93 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 169 (345)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCC
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccc
Confidence 99999999875 468888999999999999999999 99999999999999999999999999987532211 122
Q ss_pred cccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCc---cccccccccccccccCCCCchHHHHHH
Q 002875 762 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---PIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
..++..|.+||+..+..++.++||||+||++|||+||+.||......... ........+.... ...+. ....+
T Consensus 170 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~---~~s~~ 245 (345)
T 3a8x_A 170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPR---SLSVK 245 (345)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-CCCCT---TSCHH
T ss_pred cCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-CCCCC---CCCHH
Confidence 33566788999988888899999999999999999999999642211100 0000011111111 11111 12346
Q ss_pred HHHHHHHcccCCCCCCCCH------HHHHHH
Q 002875 839 VLDVALLCTRSTPSDRPSM------EEALKL 863 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~------~~v~~~ 863 (872)
+.+++.+||+.||++||++ +|++++
T Consensus 246 ~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 246 AASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp HHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred HHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 7789999999999999995 677654
No 116
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.2e-38 Score=338.80 Aligned_cols=246 Identities=17% Similarity=0.234 Sum_probs=187.3
Q ss_pred cchhhhccCCCCCceeeeec-CCCcE----EEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEE
Q 002875 610 STECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~-~~g~~----vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 682 (872)
|...+.||+|+||.||+|.. .+|+. ||+|.+.... ...+.+.+|+.++++++|||||+++++|.+.+ .++||
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~ 95 (327)
T 3poz_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIT 95 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEE
T ss_pred cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEE
Confidence 33889999999999999984 45554 5888775432 34567889999999999999999999998765 78999
Q ss_pred cccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC
Q 002875 683 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 759 (872)
Q Consensus 683 ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~ 759 (872)
||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 96 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp ECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 99999999999965 357889999999999999999999 999999999999999999999999999976533222
Q ss_pred CC----cccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002875 760 SF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 834 (872)
Q Consensus 760 ~~----~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (872)
.. ..++..|.+||...+..++.++|||||||++|||+| |+.||....... ...... .......+. .
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~~~---~~~~~~~~~---~ 243 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE---KGERLPQPP---I 243 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHH---TTCCCCCCT---T
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHHHHH---cCCCCCCCc---c
Confidence 11 112345778888888889999999999999999999 888876432211 000010 000011111 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 835 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 835 ~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
....+.+++.+||+.||++|||++|++++|+.+.
T Consensus 244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 244 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 2346778999999999999999999999997664
No 117
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.9e-38 Score=329.83 Aligned_cols=243 Identities=19% Similarity=0.259 Sum_probs=192.3
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecC--CeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ey~~ 686 (872)
..+.+|+|+||.||+|+. +|+.||||++.... ...+.+.+|+.++++++|||||+++++|.+. +..++||||++
T Consensus 14 ~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 788999999999999997 48999999997542 3356788999999999999999999999887 78899999999
Q ss_pred CCChHHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCC--cccCCCCCCCeeeCCCCCeeEccccccccccccCCC
Q 002875 687 NGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 760 (872)
Q Consensus 687 ~g~L~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~--i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~ 760 (872)
+|+|.+++... .++.+...++.|+++||+|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~--- 166 (271)
T 3kmu_A 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP--- 166 (271)
T ss_dssp TCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT---
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeeccc---
Confidence 99999999864 58899999999999999999998 6 999999999999999999999999987543221
Q ss_pred CcccccccCchhhhcccCCc---ccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002875 761 FPAKIAWTESGEFYNAMKEE---MYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 837 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~~~~~~---~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (872)
...++..|.+||...+.... .++||||+||++|||+||+.||........ ..........+. .+ .....
T Consensus 167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~---~~---~~~~~ 238 (271)
T 3kmu_A 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI--GMKVALEGLRPT---IP---PGISP 238 (271)
T ss_dssp TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH--HHHHHHSCCCCC---CC---TTCCH
T ss_pred CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH--HHHHHhcCCCCC---CC---CCCCH
Confidence 12234557788887654433 379999999999999999999874332110 000000110111 11 11234
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 838 LVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 838 ~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
.+.+++.+||+.||++|||++|+++.|+.++.
T Consensus 239 ~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 239 HVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 57789999999999999999999999998865
No 118
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.5e-38 Score=347.26 Aligned_cols=242 Identities=15% Similarity=0.167 Sum_probs=184.3
Q ss_pred hhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhh-ccCCCCceeEEEEEec----CCeeEEEEcccCC
Q 002875 614 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIG-TVRHKNLIRLLGFCYN----RHQAYLLYDYLPN 687 (872)
Q Consensus 614 ~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~-~l~H~niv~l~~~~~~----~~~~~lv~ey~~~ 687 (872)
+.||+|+||.||+|.. .+|+.||||+++.. ..+.+|++++. ..+|||||+++++|.. .+..|+|||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 6899999999999985 57899999999743 34567777764 4589999999999875 5678999999999
Q ss_pred CChHHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC---CCCeeEccccccccccccCC-
Q 002875 688 GNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG- 759 (872)
Q Consensus 688 g~L~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~---~~~~ki~dfg~~~~~~~~~~- 759 (872)
|+|.+++... .++.+...|+.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 144 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~ 220 (400)
T 1nxk_A 144 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 220 (400)
T ss_dssp EEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----
T ss_pred CcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCCCcc
Confidence 9999999763 57889999999999999999999 9999999999999997 78899999999976443221
Q ss_pred CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002875 760 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 839 (872)
Q Consensus 760 ~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (872)
....++.+|.+||+.....++.++|||||||++|||+||+.||........... ....+.........+.......++
T Consensus 221 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~s~~~ 298 (400)
T 1nxk_A 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRMGQYEFPNPEWSEVSEEV 298 (400)
T ss_dssp ------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHHHHHcCcccCCCcccccCCHHH
Confidence 223356678889998888899999999999999999999999975443221100 000000000000011112234567
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHH
Q 002875 840 LDVALLCTRSTPSDRPSMEEALKLL 864 (872)
Q Consensus 840 ~~l~~~cl~~dp~~Rpt~~~v~~~L 864 (872)
.+++.+||+.||++|||++|++++-
T Consensus 299 ~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 299 KMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHHCCCChhHCcCHHHHhcCc
Confidence 8999999999999999999999763
No 119
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.2e-38 Score=341.15 Aligned_cols=253 Identities=15% Similarity=0.162 Sum_probs=195.2
Q ss_pred chhhHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc------chhHHHHHHHHHHhhccCCCCceeEEEEE
Q 002875 600 TANDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG------ATRIKIVSEFITRIGTVRHKNLIRLLGFC 672 (872)
Q Consensus 600 ~~~~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~~~~ 672 (872)
+..++.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||+++++|
T Consensus 20 ~~~~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 97 (345)
T 3hko_A 20 SLLELQKKYH--LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY 97 (345)
T ss_dssp CHHHHHHHEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhhhhhhhee--ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh
Confidence 3566777787 889999999999999986 67889999998653 23456788999999999999999999999
Q ss_pred ecCCeeEEEEcccCCCChHHHhhC------------------------------------------CCCHHHHHHHHHHH
Q 002875 673 YNRHQAYLLYDYLPNGNLSEKIRT------------------------------------------KRDWAAKYKIVLGV 710 (872)
Q Consensus 673 ~~~~~~~lv~ey~~~g~L~~~l~~------------------------------------------~~~~~~~~~i~~~i 710 (872)
.+.+..++|||||++|+|.+++.. ..++.....++.|+
T Consensus 98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 177 (345)
T 3hko_A 98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177 (345)
T ss_dssp ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 999999999999999999999852 01345567899999
Q ss_pred HHHHHHHhhCCCCCcccCCCCCCCeeeCCCC--CeeEccccccccccccCC------CCcccccccCchhhhcc--cCCc
Q 002875 711 ARGLCFLHHDCYPAIPHGDLKASNIVFDENM--EPHLAEFGFKYLTQLADG------SFPAKIAWTESGEFYNA--MKEE 780 (872)
Q Consensus 711 ~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~--~~ki~dfg~~~~~~~~~~------~~~~~~~~~~~~e~~~~--~~~~ 780 (872)
++||+|||+. +|+||||||+||+++.++ .+||+|||+++....... ....++..|.+||.... ..++
T Consensus 178 ~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 254 (345)
T 3hko_A 178 FSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG 254 (345)
T ss_dssp HHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCC
T ss_pred HHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCC
Confidence 9999999999 999999999999998766 899999999875432111 12224556788888754 5678
Q ss_pred ccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 002875 781 MYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 860 (872)
Q Consensus 781 ~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v 860 (872)
.++|||||||++|||+||+.||....... ....+.........+........+.+++.+||+.||++|||++|+
T Consensus 255 ~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 255 PKCDAWSAGVLLHLLLMGAVPFPGVNDAD------TISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCChHH------HHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 89999999999999999999987543211 111111111111111122234567889999999999999999999
Q ss_pred HHH
Q 002875 861 LKL 863 (872)
Q Consensus 861 ~~~ 863 (872)
+++
T Consensus 329 l~h 331 (345)
T 3hko_A 329 LQH 331 (345)
T ss_dssp HHS
T ss_pred hcC
Confidence 875
No 120
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-38 Score=343.46 Aligned_cols=246 Identities=20% Similarity=0.227 Sum_probs=184.1
Q ss_pred chhhhccCCCCCceeeeecC--C--CcEEEEEEeecc--chhHHHHHHHHHHhhccCCCCceeEEEEEec-CCeeEEEEc
Q 002875 611 TECEEAARPQSAAGCKAVLP--T--GITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYD 683 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~--~--g~~vavK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~lv~e 683 (872)
...+.||+|+||.||+|+.. + +..||||.++.. ....+.+.+|+.++++++|||||+++++|.+ ++..++|||
T Consensus 92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e 171 (373)
T 3c1x_A 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 171 (373)
T ss_dssp EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEE
T ss_pred ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEE
Confidence 36688999999999999853 3 346899998643 2346778999999999999999999999764 567899999
Q ss_pred ccCCCChHHHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-
Q 002875 684 YLPNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 759 (872)
Q Consensus 684 y~~~g~L~~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~- 759 (872)
|+++|+|.++++.. .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 172 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 172 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 99999999999753 47888899999999999999999 999999999999999999999999999875432211
Q ss_pred -----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002875 760 -----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 834 (872)
Q Consensus 760 -----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (872)
....++..|.+||......++.++|||||||++|||+||+.|++......... ...........+. .
T Consensus 249 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~-----~~~~~~~~~~~p~---~ 320 (373)
T 3c1x_A 249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-----VYLLQGRRLLQPE---Y 320 (373)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH-----HHHHTTCCCCCCT---T
T ss_pred cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH-----HHHHcCCCCCCCC---C
Confidence 11113345778888888888999999999999999999666554333222111 0111111011111 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 835 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 835 ~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
....+.+++.+||+.||++|||++|+++.|+.+
T Consensus 321 ~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 321 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 224577899999999999999999999999876
No 121
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=337.32 Aligned_cols=240 Identities=16% Similarity=0.120 Sum_probs=194.4
Q ss_pred hHHhhcCcchhhhccCCCCCceeeee-cCCCcEEEEEEeeccch---------hHHHHHHHHHHhhccCCCCceeEEEEE
Q 002875 603 DVLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFC 672 (872)
Q Consensus 603 ~~~~~~~~~~~~~~g~g~~~~v~~~~-~~~g~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~~~~ 672 (872)
+..+.|. ..+.||+|+||.||+|. ..+|+.||||++..... ..+.+.+|+.++++++|||||+++++|
T Consensus 21 ~~~~~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~ 98 (335)
T 3dls_A 21 EYSQKYS--TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF 98 (335)
T ss_dssp HHHHHEE--EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred ccccceE--EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 4455666 88999999999999998 46899999999975431 234567899999999999999999999
Q ss_pred ecCCeeEEEEcccCCC-ChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccc
Q 002875 673 YNRHQAYLLYDYLPNG-NLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 749 (872)
Q Consensus 673 ~~~~~~~lv~ey~~~g-~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg 749 (872)
.+.+..++||||+.+| +|.+++... .++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 99 ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999999877 999999764 57888999999999999999999 99999999999999999999999999
Q ss_pred ccccccccCCC-CcccccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccC
Q 002875 750 FKYLTQLADGS-FPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 827 (872)
Q Consensus 750 ~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (872)
+++........ ...++..|.+||...+..+ +.++||||+||++|||+||+.||...... .......
T Consensus 176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~---- 243 (335)
T 3dls_A 176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------VEAAIHP---- 243 (335)
T ss_dssp TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------TTTCCCC----
T ss_pred cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------HhhccCC----
Confidence 99765433221 2225566788888776655 78899999999999999999998642211 0111111
Q ss_pred CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 828 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 828 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+.. ...++.+++.+||+.||++|||++|++++
T Consensus 244 -~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 244 -PYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -SSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -Ccc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 12457789999999999999999999986
No 122
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-37 Score=338.81 Aligned_cols=247 Identities=18% Similarity=0.198 Sum_probs=194.0
Q ss_pred hhhhccCCCCCceeeeec------CCCcEEEEEEeeccc--hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEE
Q 002875 612 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~------~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 682 (872)
..+.||+|+||.||+|.. .+++.||||.+.... ...+.+.+|+.+++++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 788999999999999985 356789999997532 2356788999999999 8999999999999999999999
Q ss_pred cccCCCChHHHhhCC-------------------------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee
Q 002875 683 DYLPNGNLSEKIRTK-------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 737 (872)
Q Consensus 683 ey~~~g~L~~~l~~~-------------------------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill 737 (872)
||+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||++
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll 205 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLV 205 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEE
Confidence 999999999999753 47788899999999999999999 99999999999999
Q ss_pred CCCCCeeEccccccccccccCCC----CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcc
Q 002875 738 DENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 812 (872)
Q Consensus 738 ~~~~~~ki~dfg~~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~ 812 (872)
+.++.+||+|||++......... ...++..|.+||......++.++|||||||++|||+| |..||........
T Consensus 206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-- 283 (344)
T 1rjb_A 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN-- 283 (344)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--
T ss_pred cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH--
Confidence 99999999999998755433221 1113345778888877788999999999999999999 8888764432110
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 813 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
............ .+. .....+.+++.+||+.||++|||++|++++|+.+..
T Consensus 284 ~~~~~~~~~~~~---~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 284 FYKLIQNGFKMD---QPF---YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp HHHHHHTTCCCC---CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHhcCCCCC---CCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 001111111110 011 123467789999999999999999999999987654
No 123
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.9e-38 Score=339.29 Aligned_cols=249 Identities=17% Similarity=0.223 Sum_probs=191.2
Q ss_pred HHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEE
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 681 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 681 (872)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ...+|++++.++ +|||||++++++.+++..|+|
T Consensus 20 ~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 20 FTDGYE--VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccccEE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 445566 889999999999999986 5799999999975432 235678888887 799999999999999999999
Q ss_pred EcccCCCChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC----CCeeEcccccccccc
Q 002875 682 YDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKYLTQ 755 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~----~~~ki~dfg~~~~~~ 755 (872)
||||++|+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||++.++ +.+||+|||+++...
T Consensus 95 ~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 95 TELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp ECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999999764 57888899999999999999999 99999999999998533 349999999997654
Q ss_pred ccCC--CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002875 756 LADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 833 (872)
Q Consensus 756 ~~~~--~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (872)
.... ....++..|.+||......++.++||||+||++|||+||..||......... .....+...........+.
T Consensus 172 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~---~~~~~i~~~~~~~~~~~~~ 248 (342)
T 2qr7_A 172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE---EILARIGSGKFSLSGGYWN 248 (342)
T ss_dssp CTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHH---HHHHHHHHCCCCCCSTTTT
T ss_pred CCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHH---HHHHHHccCCcccCccccc
Confidence 3222 1223566688889887777888999999999999999999999753221110 1111111111010011112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 834 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 834 ~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
....++.+++.+||+.||++|||++|++++
T Consensus 249 ~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 249 SVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 233567789999999999999999999864
No 124
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3e-37 Score=326.72 Aligned_cols=248 Identities=16% Similarity=0.203 Sum_probs=190.5
Q ss_pred hHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeE
Q 002875 603 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 679 (872)
Q Consensus 603 ~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 679 (872)
++.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 19 ~i~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 96 (285)
T 3is5_A 19 TIDDLFI--FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMY 96 (285)
T ss_dssp CHHHHEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred Chhhhee--ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEE
Confidence 3445566 889999999999999985 578999999997543 24578889999999999999999999999999999
Q ss_pred EEEcccCCCChHHHhhC------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee---CCCCCeeEccccc
Q 002875 680 LLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGF 750 (872)
Q Consensus 680 lv~ey~~~g~L~~~l~~------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill---~~~~~~ki~dfg~ 750 (872)
+||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~ 173 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGL 173 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence 99999999999998853 468888999999999999999999 99999999999999 4567899999999
Q ss_pred cccccccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCC
Q 002875 751 KYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 829 (872)
Q Consensus 751 ~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (872)
++....... ....++..|.+||... ..++.++||||+||++|||+||+.||........ ........ ....
T Consensus 174 a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~------~~~~~~~~-~~~~ 245 (285)
T 3is5_A 174 AELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV------QQKATYKE-PNYA 245 (285)
T ss_dssp CCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHCC-CCCC
T ss_pred ceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH------HhhhccCC-cccc
Confidence 976443222 2223556678888775 4578899999999999999999999875321110 00000000 0000
Q ss_pred CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 830 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 830 ~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
........++.+++.+||+.||++|||++|++++
T Consensus 246 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 246 VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001122457789999999999999999999864
No 125
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.3e-37 Score=338.11 Aligned_cols=238 Identities=13% Similarity=0.093 Sum_probs=194.5
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++.+.+..|+||||++
T Consensus 45 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 124 (350)
T 1rdq_E 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124 (350)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 889999999999999986 579999999997532 235677889999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCCccc
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 764 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~~~~ 764 (872)
+|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ...+
T Consensus 125 gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~-~~~g 200 (350)
T 1rdq_E 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-TLCG 200 (350)
T ss_dssp TCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC-CCEE
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCCcc-cccC
Confidence 9999999975 467888999999999999999999 999999999999999999999999999976543322 2335
Q ss_pred ccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 844 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 844 (872)
+..|.+||...+..++.++||||+||++|||+||..||....... ....+.... ...+. .....+.+++.
T Consensus 201 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~---~~~~~~~~li~ 270 (350)
T 1rdq_E 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSGK-VRFPS---HFSSDLKDLLR 270 (350)
T ss_dssp CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCT---TCCHHHHHHHH
T ss_pred CccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH------HHHHHHcCC-CCCCC---CCCHHHHHHHH
Confidence 667888998888888999999999999999999999987543211 111111111 11111 12345778999
Q ss_pred HcccCCCCCCCC-----HHHHHHH
Q 002875 845 LCTRSTPSDRPS-----MEEALKL 863 (872)
Q Consensus 845 ~cl~~dp~~Rpt-----~~~v~~~ 863 (872)
+||+.||++||+ ++|++++
T Consensus 271 ~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 271 NLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhhcCHHhccCCccCCHHHHHhC
Confidence 999999999998 8888764
No 126
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.7e-38 Score=334.71 Aligned_cols=240 Identities=18% Similarity=0.141 Sum_probs=184.9
Q ss_pred hhcCcchhhhccCCCCCceeeeecC-CCcEEEEEEeeccc---hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 680 (872)
+.|. ..+.||+|+||.||+|... +|+.||||++.... ........|+..+.++ +|||||+++++|.+.+..|+
T Consensus 57 ~~y~--~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQ--RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEE--EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhee--eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4566 8899999999999999874 79999999986432 2233444555555554 89999999999999999999
Q ss_pred EEcccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc
Q 002875 681 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~ 757 (872)
||||+ +|+|.+++.. ..++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 135 v~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred EEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 99999 6799998864 468999999999999999999999 9999999999999999999999999998765432
Q ss_pred CC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 758 DG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 758 ~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
.. ....++..|.+||+..+ .++.++|||||||++|||+||+.|+....... ........+ .......
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-----~~~~~~~~~------~~~~~~~ 278 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ-----QLRQGYLPP------EFTAGLS 278 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH-----HHTTTCCCH------HHHTTSC
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----HHhccCCCc------ccccCCC
Confidence 22 12235566788888765 68889999999999999999988776432110 000000000 0011223
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 837 KLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.++.+++.+||+.||++|||++|++++
T Consensus 279 ~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 279 SELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 568899999999999999999999875
No 127
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.8e-38 Score=333.85 Aligned_cols=243 Identities=18% Similarity=0.241 Sum_probs=191.0
Q ss_pred hhhhccCCCCCceeeeecC-CC-------cEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEE
Q 002875 612 ECEEAARPQSAAGCKAVLP-TG-------ITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~-~g-------~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 682 (872)
..+.||+|+||.||+|... +| +.||+|.+.... ...+.+.+|++++++++|||||++++++.+++..++||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 7889999999999999853 33 579999996543 34677899999999999999999999999999999999
Q ss_pred cccCCCChHHHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC--------eeEcccccc
Q 002875 683 DYLPNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--------PHLAEFGFK 751 (872)
Q Consensus 683 ey~~~g~L~~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~--------~ki~dfg~~ 751 (872)
||+++|+|.+++... .++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 92 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~ 168 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168 (289)
T ss_dssp ECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSC
T ss_pred ECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeeccCccc
Confidence 999999999999753 67888999999999999999999 9999999999999998877 999999998
Q ss_pred ccccccCCCCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002875 752 YLTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 830 (872)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (872)
....... ...+...|.+||.... ..++.++||||+||++|||+||+.|+.......... ..... .... +.
T Consensus 169 ~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~--~~~~~---~~~~--~~ 239 (289)
T 4fvq_A 169 ITVLPKD--ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL--QFYED---RHQL--PA 239 (289)
T ss_dssp TTTSCHH--HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH--HHHHT---TCCC--CC
T ss_pred ccccCcc--ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH--HHhhc---cCCC--CC
Confidence 6432211 1123345778887765 678899999999999999999877766443211100 00000 0000 00
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 831 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 831 ~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
. ...++.+++.+||+.||++|||++|++++|+.+..
T Consensus 240 ~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 240 P---KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp C---SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred C---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 0 12346788899999999999999999999988743
No 128
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.4e-37 Score=328.42 Aligned_cols=243 Identities=19% Similarity=0.269 Sum_probs=194.8
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCChH
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 691 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L~ 691 (872)
..+.+|+|+||.||+|...+++.||||.+.......+.+.+|++++++++||||+++++++.+ +..++||||+++|+|.
T Consensus 17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHH
T ss_pred heeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCCCHH
Confidence 788999999999999998888899999998766667788999999999999999999999864 5689999999999999
Q ss_pred HHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC---CCccc
Q 002875 692 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SFPAK 764 (872)
Q Consensus 692 ~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~---~~~~~ 764 (872)
+++.. ..++.+...++.|+++||+|||+. +|+||||||+||++++++.+||+|||++........ ....+
T Consensus 96 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 172 (279)
T 1qpc_A 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 172 (279)
T ss_dssp HHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCC
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCC
Confidence 99975 468889999999999999999999 999999999999999999999999999876433211 11112
Q ss_pred ccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 843 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 843 (872)
...|.+||......++.++||||+||++|||+| |..||.+..... ....+........+. ....++.+++
T Consensus 173 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~l~~li 243 (279)
T 1qpc_A 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGYRMVRPD---NCPEELYQLM 243 (279)
T ss_dssp CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TCCHHHHHHH
T ss_pred ccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH------HHHHHhcccCCCCcc---cccHHHHHHH
Confidence 335778888877778889999999999999999 777775432111 000111100001111 1234677899
Q ss_pred HHcccCCCCCCCCHHHHHHHHccc
Q 002875 844 LLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 844 ~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
.+||+.||++|||++++++.|+.+
T Consensus 244 ~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 244 RLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhccChhhCCCHHHHHHHHHHH
Confidence 999999999999999999999765
No 129
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7.3e-37 Score=343.93 Aligned_cols=406 Identities=22% Similarity=0.291 Sum_probs=204.4
Q ss_pred CccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCC
Q 002875 35 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFK 114 (872)
Q Consensus 35 ~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~ 114 (872)
|+.+. .++|++|++++|.+ +.+|++|+.+++|++|++++|.+.+.+|.+++++.+|+++++.+|.. .
T Consensus 5 p~~~~-~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~ 71 (454)
T 1jl5_A 5 PRNVS-NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------R 71 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------H
T ss_pred ccccc-cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------c
Confidence 44443 57788888888877 56777777888888888877777777777777777765555544421 3
Q ss_pred CCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEcc
Q 002875 115 SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLF 194 (872)
Q Consensus 115 ~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~ 194 (872)
++++|++++|.+++. |. ..++|++|++++|.+.+ +|.. +++|++|++++|.+.+ +|.. .++|++|+++
T Consensus 72 ~l~~L~l~~~~l~~l-p~---~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~ 139 (454)
T 1jl5_A 72 QAHELELNNLGLSSL-PE---LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVS 139 (454)
T ss_dssp TCSEEECTTSCCSCC-CS---CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECC
T ss_pred CCCEEEecCCccccC-CC---CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECc
Confidence 456677777766542 22 12556666666666655 4432 3677788888887764 2221 1578888888
Q ss_pred CCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccC
Q 002875 195 RNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 274 (872)
Q Consensus 195 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~ 274 (872)
+|++++ +| +|..+++|++|++++|++++ +|..+ .+|++|++++|++.+ +| .+..+++|++|++++|.+++ +
T Consensus 140 ~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l 210 (454)
T 1jl5_A 140 NNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-L 210 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-C
T ss_pred CCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-C
Confidence 888876 45 57888888888888888875 44433 478888888888876 44 57778888888888888775 3
Q ss_pred CccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCC
Q 002875 275 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLP 354 (872)
Q Consensus 275 p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 354 (872)
|... .+|+.|++++|.+. .+| .+..+..++.+++.+|++.+. |. .+++|+.|++++|++++ +|.. .+
T Consensus 211 ~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~---~~~~L~~L~l~~N~l~~-l~~~---~~ 277 (454)
T 1jl5_A 211 PDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL-PD---LPPSLEALNVRDNYLTD-LPEL---PQ 277 (454)
T ss_dssp CCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CS---CCTTCCEEECCSSCCSC-CCCC---CT
T ss_pred CCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcc-cc---cccccCEEECCCCcccc-cCcc---cC
Confidence 4322 46778888877776 555 355666667777777666642 22 23566677777776664 2322 35
Q ss_pred CCcEEEcCCCcCCCCCCchhhhhcccccccccCCCCCCCcCCcccCCC-cccccccccccccCCCCCCCCcCCccceeec
Q 002875 355 DINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSL-PSLQNFSASACNITGNLPPFKSCKSISVIES 433 (872)
Q Consensus 355 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~~~~~~~~~~l-~~L~~L~l~~~~l~~~~~~~~~~~~l~~l~l 433 (872)
+|++|++++|.+++. |.. .++|++|++++|... + ++ .+ ++|+.|++++|.+++ +|.. +++|+.+++
T Consensus 278 ~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~-~-i~----~~~~~L~~L~Ls~N~l~~-lp~~--~~~L~~L~L 344 (454)
T 1jl5_A 278 SLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIR-S-LC----DLPPSLEELNVSNNKLIE-LPAL--PPRLERLIA 344 (454)
T ss_dssp TCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCS-E-EC----CCCTTCCEEECCSSCCSC-CCCC--CTTCCEEEC
T ss_pred cCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCC-c-cc----CCcCcCCEEECCCCcccc-cccc--CCcCCEEEC
Confidence 666667766666541 110 145666666666321 1 11 11 245555555555443 2221 234444444
Q ss_pred cccccCCCCCCcccccccCcEEEccCcccee--ccchhccCCCCCCEEECCCCccccccCccccCCCCCcEEECcCCeee
Q 002875 434 HMNNLSGTIPESVSNCVELERIDLANNKLIG--SIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 511 (872)
Q Consensus 434 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 511 (872)
+.|.+++ +|. .+++|++|++++|++++ .+|..+.. ++.|.+.+.+|.. +++|++|++++|+++
T Consensus 345 ~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~ 409 (454)
T 1jl5_A 345 SFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLR 409 (454)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------------
T ss_pred CCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCC
Confidence 4444442 332 23444444444444444 22322211 1123333333321 278889999999988
Q ss_pred e--cCC
Q 002875 512 G--SIP 515 (872)
Q Consensus 512 ~--~~p 515 (872)
+ .+|
T Consensus 410 ~~~~iP 415 (454)
T 1jl5_A 410 EFPDIP 415 (454)
T ss_dssp ------
T ss_pred ccccch
Confidence 7 555
No 130
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.8e-37 Score=329.30 Aligned_cols=244 Identities=21% Similarity=0.268 Sum_probs=197.2
Q ss_pred hhhhccCCCCCceeeeecC-CCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCCh
Q 002875 612 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 690 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L 690 (872)
..+.||+|+||.||+|... +|+.||||.+.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 7889999999999999864 588999999987766778899999999999999999999999999999999999999999
Q ss_pred HHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCC---cc
Q 002875 691 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PA 763 (872)
Q Consensus 691 ~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~---~~ 763 (872)
.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......... ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 173 (288)
T 3kfa_A 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 173 (288)
T ss_dssp HHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEE
T ss_pred HHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCc
Confidence 999964 357888999999999999999999 99999999999999999999999999987654322111 11
Q ss_pred cccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002875 764 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 842 (872)
Q Consensus 764 ~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 842 (872)
+...|.+||......++.++||||+||++|||+| |..||....... .......... ...+ ......+.++
T Consensus 174 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~~~~~~~~---~~~~---~~~~~~l~~l 244 (288)
T 3kfa_A 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKDYR---MERP---EGCPEKVYEL 244 (288)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHHTTCC---CCCC---TTCCHHHHHH
T ss_pred cccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhccCC---CCCC---CCCCHHHHHH
Confidence 2345778898887888999999999999999999 777765432111 0011111111 1111 1123467789
Q ss_pred HHHcccCCCCCCCCHHHHHHHHccc
Q 002875 843 ALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 843 ~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
+.+||+.||++|||++|+++.|+.+
T Consensus 245 i~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 245 MRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhCCChhhCcCHHHHHHHHHHH
Confidence 9999999999999999999998765
No 131
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=328.03 Aligned_cols=243 Identities=19% Similarity=0.250 Sum_probs=178.8
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch----hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 680 (872)
+.|. ..+.+|+|+||.||+|+. .+|+.||||.+..... ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 11 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 11 EDFK--VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccce--eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 3455 889999999999999986 6899999999975322 24678899999999999999999999999999999
Q ss_pred EEcccCCCChHHHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc
Q 002875 681 LYDYLPNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~ 757 (872)
||||+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999763 57889999999999999999999 9999999999999999999999999998754322
Q ss_pred CC--CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002875 758 DG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 835 (872)
Q Consensus 758 ~~--~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (872)
.. ....++..|.+||......++.++||||+||++|||+||+.||........ ........ ...+. ..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~-~~~~~---~~ 235 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT------LNKVVLAD-YEMPS---FL 235 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCSSC-CCCCT---TS
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH------HHHHhhcc-cCCcc---cc
Confidence 11 112245567788888777788999999999999999999999875432111 01111100 00011 12
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 836 IKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 836 ~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
..++.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 236 SIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 2457789999999999999999999874
No 132
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.8e-37 Score=327.56 Aligned_cols=240 Identities=16% Similarity=0.206 Sum_probs=190.5
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch----hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (279)
T 3fdn_A 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 92 (279)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCC
Confidence 788999999999999985 5678999999965321 24568899999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCCccc
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 764 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~~~~ 764 (872)
+|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++............+
T Consensus 93 ~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 3fdn_A 93 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCG 169 (279)
T ss_dssp TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--------CC
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcccccccCC
Confidence 9999999875 467888999999999999999998 99999999999999999999999999986543332223335
Q ss_pred ccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 844 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 844 (872)
...|.+||...+..++.++||||+||++|||+||..||....... ....+.... ...+. .....+.+++.
T Consensus 170 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~---~~~~~~~~li~ 239 (279)
T 3fdn_A 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE------TYKRISRVE-FTFPD---FVTEGARDLIS 239 (279)
T ss_dssp CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTC-CCCCT---TSCHHHHHHHH
T ss_pred CCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH------HHHHHHhCC-CCCCC---cCCHHHHHHHH
Confidence 566788898888888899999999999999999999986432111 001111100 01111 12245678899
Q ss_pred HcccCCCCCCCCHHHHHHHH
Q 002875 845 LCTRSTPSDRPSMEEALKLL 864 (872)
Q Consensus 845 ~cl~~dp~~Rpt~~~v~~~L 864 (872)
+||+.||++|||++|++++-
T Consensus 240 ~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 240 RLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp HHCCSSGGGSCCHHHHHHCH
T ss_pred HHhccChhhCCCHHHHhhCc
Confidence 99999999999999999753
No 133
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.8e-37 Score=327.77 Aligned_cols=244 Identities=16% Similarity=0.175 Sum_probs=183.8
Q ss_pred hhhhccCCCCCceeeeecC----CCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~----~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+.||+|+||.||+|... .+..||||.+.... ...+.+.+|+.++++++|||||++++++. ++..|+||||+
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~ 97 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 97 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecC
Confidence 7889999999999999863 35679999986532 23567889999999999999999999984 46789999999
Q ss_pred CCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC--
Q 002875 686 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 760 (872)
Q Consensus 686 ~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~-- 760 (872)
++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (281)
T 1mp8_A 98 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 174 (281)
T ss_dssp TTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------------
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCccccccc
Confidence 99999999974 357889999999999999999999 9999999999999999999999999998765332211
Q ss_pred -CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002875 761 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 761 -~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
...+...|.+||......++.++||||+||++|||+| |..||....... ....+........++ .....
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~---~~~~~ 245 (281)
T 1mp8_A 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGERLPMPP---NCPPT 245 (281)
T ss_dssp ----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCCCCCCT---TCCHH
T ss_pred ccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH------HHHHHHcCCCCCCCC---CCCHH
Confidence 1113345778898887888999999999999999997 777776433211 111111111111111 22346
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 839 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
+.+++.+||+.||++|||++|++++|+.+.
T Consensus 246 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 246 LYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 778999999999999999999999998763
No 134
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.5e-37 Score=335.65 Aligned_cols=246 Identities=21% Similarity=0.270 Sum_probs=189.8
Q ss_pred chhhhccCCCCCceeeeec-CCCcE----EEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEc
Q 002875 611 TECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~-~~g~~----vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 683 (872)
...+.||+|+||.||+|.. .+|+. ||+|.+.... ...+.+.+|+.++++++|||||+++++|. .+..++|||
T Consensus 16 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e 94 (325)
T 3kex_A 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQ 94 (325)
T ss_dssp EEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEE
T ss_pred eeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEE
Confidence 3788999999999999985 45654 7777775332 22456678899999999999999999986 456899999
Q ss_pred ccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC
Q 002875 684 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 760 (872)
Q Consensus 684 y~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~ 760 (872)
|+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 95 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 171 (325)
T 3kex_A 95 YLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171 (325)
T ss_dssp CCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC
T ss_pred eCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCccccc
Confidence 9999999999975 357788999999999999999999 9999999999999999999999999999765432221
Q ss_pred ----CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002875 761 ----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 835 (872)
Q Consensus 761 ----~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (872)
...+...|.+||......++.++|||||||++|||+| |+.||........ ....... .....+.. .
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~~~~~~---~~~~~~~~---~ 242 (325)
T 3kex_A 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV---PDLLEKG---ERLAQPQI---C 242 (325)
T ss_dssp CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH---HHHHHTT---CBCCCCTT---B
T ss_pred ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH---HHHHHcC---CCCCCCCc---C
Confidence 1223445788898888889999999999999999999 8888864332110 0000000 00000111 1
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 836 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 836 ~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
...+.+++.+||+.||++|||++|++++|+.+..
T Consensus 243 ~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 243 TIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp CTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 2346688899999999999999999999987653
No 135
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.1e-37 Score=333.03 Aligned_cols=245 Identities=18% Similarity=0.227 Sum_probs=195.1
Q ss_pred hhhhccCCCCCceeeeec------CCCcEEEEEEeeccc--hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEE
Q 002875 612 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~------~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 682 (872)
..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+.+++++ +||||++++++|.+++..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 788999999999999973 567899999997543 3456788999999999 9999999999999999999999
Q ss_pred cccCCCChHHHhhCC--------------------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC
Q 002875 683 DYLPNGNLSEKIRTK--------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 742 (872)
Q Consensus 683 ey~~~g~L~~~l~~~--------------------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~ 742 (872)
||+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 183 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 183 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETTTE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcCCCC
Confidence 999999999999652 57888999999999999999999 9999999999999999999
Q ss_pred eeEccccccccccccCCC----CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccc
Q 002875 743 PHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 817 (872)
Q Consensus 743 ~ki~dfg~~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~ 817 (872)
+||+|||+++........ ...++..|.+||......++.++||||+||++|||+| |..||........ .....
T Consensus 184 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~~~ 261 (313)
T 1t46_A 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--FYKMI 261 (313)
T ss_dssp EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH--HHHHH
T ss_pred EEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH--HHHHh
Confidence 999999998765433221 1123345778888877788999999999999999999 7777754322110 00111
Q ss_pred cccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 818 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
....... .. ......+.+++.+||+.||++|||++|++++|+.+
T Consensus 262 ~~~~~~~---~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 262 KEGFRML---SP---EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp HHTCCCC---CC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCC---Cc---ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 1111110 01 11234677899999999999999999999999865
No 136
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1e-37 Score=333.01 Aligned_cols=248 Identities=10% Similarity=0.004 Sum_probs=195.1
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEEcccCCCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 689 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~g~ 689 (872)
..+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+.+++++ +|+|++++++++.+....++||||+ +|+
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 91 (298)
T 1csn_A 14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 91 (298)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCC
Confidence 889999999999999994 789999999986432 344577889999998 7999999999999999999999999 999
Q ss_pred hHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC-----eeEccccccccccccCC--
Q 002875 690 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-----PHLAEFGFKYLTQLADG-- 759 (872)
Q Consensus 690 L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~-----~ki~dfg~~~~~~~~~~-- 759 (872)
|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++.......
T Consensus 92 L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (298)
T 1csn_A 92 LEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 168 (298)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCC
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccc
Confidence 9999974 468899999999999999999999 9999999999999987776 99999999976543221
Q ss_pred -------CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCC-CCc
Q 002875 760 -------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS-SSS 831 (872)
Q Consensus 760 -------~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 831 (872)
....++..|.+||...+..++.++|||||||++|||+||+.||........... ...+........ ...
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 245 (298)
T 1csn_A 169 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQK---YERIGEKKQSTPLREL 245 (298)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHH---HHHHHHHHHHSCHHHH
T ss_pred cccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHH---HHHHHhhccCccHHHH
Confidence 112245567888988888889999999999999999999999875432211110 001100000000 000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 832 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 832 ~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
......++.+++.+||+.||++|||++++++.|+.+
T Consensus 246 ~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 246 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 012235678899999999999999999999999765
No 137
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.2e-37 Score=336.32 Aligned_cols=242 Identities=14% Similarity=0.121 Sum_probs=186.0
Q ss_pred hcCcchhhhccCCCCCceeeeec----CCCcEEEEEEeeccc-----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCe
Q 002875 607 SFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 677 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~----~~g~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 677 (872)
.|. ..+.||+|+||.||+|.. .+|+.||||+++... .....+.+|+.++++++|||||++++++.+.+.
T Consensus 18 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 18 CFE--LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GEE--EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HeE--EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 355 889999999999999986 589999999997542 234567789999999999999999999999999
Q ss_pred eEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccc
Q 002875 678 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 755 (872)
Q Consensus 678 ~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~ 755 (872)
.|+|||||++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999999999965 457888889999999999999999 99999999999999999999999999986532
Q ss_pred ccC--CCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002875 756 LAD--GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 833 (872)
Q Consensus 756 ~~~--~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (872)
... .....++..|.+||......++.++||||+||++|||+||+.||....... ....+.... ...++
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~-~~~p~--- 242 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK------TIDKILKCK-LNLPP--- 242 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHTC-CCCCT---
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCC-CCCCC---
Confidence 221 122235566888898888788999999999999999999999987543211 111111111 11111
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002875 834 DEIKLVLDVALLCTRSTPSDRP-----SMEEALKL 863 (872)
Q Consensus 834 ~~~~~~~~l~~~cl~~dp~~Rp-----t~~~v~~~ 863 (872)
.....+.+++.+||+.||++|| +++|++++
T Consensus 243 ~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 243 YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 1234577899999999999999 78888764
No 138
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.5e-37 Score=331.91 Aligned_cols=253 Identities=14% Similarity=0.167 Sum_probs=189.7
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc----chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 680 (872)
..|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 32 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 32 ANFR--IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGEE--EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cceE--EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3455 889999999999999985 68999999999742 2345678899999999999999999999999999999
Q ss_pred EEcccCCCChHHHhhC------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccc
Q 002875 681 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 754 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~ 754 (872)
||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999853 357888999999999999999999 9999999999999999999999999998754
Q ss_pred cccCCC--CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002875 755 QLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 832 (872)
Q Consensus 755 ~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (872)
...... ...+...|.+||......++.++|||||||++|||+||+.||........ ........ ....... .
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~---~~~~~~~--~ 260 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCKKIEQ---CDYPPLP--S 260 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH-HHHHHHHT---TCSCCCC--T
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH-HHHHHhhc---ccCCCCc--c
Confidence 332211 12245567888988877889999999999999999999999875432110 00000000 0000000 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 833 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 833 ~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
.....++.+++.+||+.||++|||++|+++.|+.+++
T Consensus 261 ~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 261 DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1123457789999999999999999999999988754
No 139
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=8.7e-38 Score=359.37 Aligned_cols=245 Identities=17% Similarity=0.214 Sum_probs=196.3
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCChH
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 691 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L~ 691 (872)
..+.||+|+||.||+|....+..||||+++......+.+.+|+++|++++|||||+++++|.+ +..|+|||||++|+|.
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 778999999999999999888899999998766667789999999999999999999999976 6789999999999999
Q ss_pred HHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC---CCCccc
Q 002875 692 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAK 764 (872)
Q Consensus 692 ~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~---~~~~~~ 764 (872)
++++. ..++.+...++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++...... .....+
T Consensus 350 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 426 (535)
T 2h8h_A 350 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 426 (535)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTS
T ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcC
Confidence 99974 368899999999999999999999 99999999999999999999999999997643211 111112
Q ss_pred ccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 843 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 843 (872)
...|.+||......++.++|||||||++|||+| |+.||.+..... ....+........+. .....+.+++
T Consensus 427 ~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l~~li 497 (535)
T 2h8h_A 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYRMPCPP---ECPESLHDLM 497 (535)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TCCHHHHHHH
T ss_pred cccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCCHHHHHHH
Confidence 234677888877788999999999999999999 777775432111 111111111011111 2234577899
Q ss_pred HHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 844 LLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 844 ~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
.+||+.||++|||++++++.|+.+..
T Consensus 498 ~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 498 CQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred HHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 99999999999999999999988743
No 140
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.9e-37 Score=334.88 Aligned_cols=245 Identities=17% Similarity=0.216 Sum_probs=183.3
Q ss_pred hhhhccCCCCCceeeeecCC-C---cEEEEEEeecc---chhHHHHHHHHHHhhccCCCCceeEEEEEecCCee------
Q 002875 612 ECEEAARPQSAAGCKAVLPT-G---ITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA------ 678 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~-g---~~vavK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~------ 678 (872)
..+.||+|+||.||+|.... + ..||||+++.. ....+.+.+|++++++++|||||++++++...+..
T Consensus 27 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CE
T ss_pred EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCcc
Confidence 88999999999999998643 3 27999999753 33467788999999999999999999999876654
Q ss_pred EEEEcccCCCChHHHhhC--------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccc
Q 002875 679 YLLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 750 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~--------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~ 750 (872)
++||||+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeeccc
Confidence 999999999999999853 367889999999999999999999 999999999999999999999999999
Q ss_pred cccccccCCC----CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccc
Q 002875 751 KYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE 825 (872)
Q Consensus 751 ~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 825 (872)
++........ ...+...|.+||......++.++||||+||++|||+| |..||....... ..........
T Consensus 184 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~ 257 (323)
T 3qup_A 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYLIGGNR 257 (323)
T ss_dssp -----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCC
T ss_pred cccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH------HHHHHhcCCC
Confidence 8754332211 1112345778888888888999999999999999999 677765433211 1111111110
Q ss_pred cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 826 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 826 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
.... ......+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 258 ~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 258 LKQP---PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp CCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC---CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111 122346788999999999999999999999998764
No 141
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=7e-38 Score=348.66 Aligned_cols=243 Identities=16% Similarity=0.088 Sum_probs=191.4
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch----hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|+.++++++|||||+++++|.+++..|+|||||+
T Consensus 78 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 889999999999999996 4588999999975321 23347889999999999999999999999999999999999
Q ss_pred CCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC---C
Q 002875 687 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---S 760 (872)
Q Consensus 687 ~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~---~ 760 (872)
+|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 158 gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~ 234 (437)
T 4aw2_A 158 GGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS 234 (437)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECC
T ss_pred CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccc
Confidence 9999999975 457888899999999999999999 999999999999999999999999999965433221 1
Q ss_pred CcccccccCchhhhc-----ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccccc-ccCCCCchHH
Q 002875 761 FPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQD 834 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~-----~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 834 (872)
...++.+|.+||+.. ...++.++||||+||++|||+||+.||.+..... ....+.... ....+.....
T Consensus 235 ~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~------~~~~i~~~~~~~~~p~~~~~ 308 (437)
T 4aw2_A 235 VAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKERFQFPTQVTD 308 (437)
T ss_dssp SCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCCCCSSCCC
T ss_pred cccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH------HHHhhhhccccccCCccccc
Confidence 234667788888875 4467889999999999999999999997543211 111111100 0000111112
Q ss_pred HHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 002875 835 EIKLVLDVALLCTRSTPSD--RPSMEEALKL 863 (872)
Q Consensus 835 ~~~~~~~l~~~cl~~dp~~--Rpt~~~v~~~ 863 (872)
...++.+++.+|+..+|++ ||+++|++++
T Consensus 309 ~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 309 VSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred CCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 2346778889999888888 9999999875
No 142
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.9e-37 Score=334.83 Aligned_cols=244 Identities=21% Similarity=0.271 Sum_probs=191.7
Q ss_pred hhhhccCCCCCceeeeec--------CCCcEEEEEEeeccc--hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEE
Q 002875 612 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~--------~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 680 (872)
..+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+++++++ +||||++++++|.+.+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 788999999999999975 457899999997543 3356788999999999 89999999999999999999
Q ss_pred EEcccCCCChHHHhhCC------------------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC
Q 002875 681 LYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 742 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~~------------------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~ 742 (872)
||||+++|+|.+++... .++.++..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 195 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcCCCC
Confidence 99999999999999753 57888899999999999999999 9999999999999999999
Q ss_pred eeEccccccccccccCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccc
Q 002875 743 PHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 817 (872)
Q Consensus 743 ~ki~dfg~~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~ 817 (872)
+||+|||+++....... ....+...|.+||......++.++|||||||++|||+| |+.||....... ..
T Consensus 196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~ 269 (334)
T 2pvf_A 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------LF 269 (334)
T ss_dssp EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HH
T ss_pred EEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH------HH
Confidence 99999999875433211 11123344778888877778899999999999999999 777776432110 00
Q ss_pred cccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 818 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
..+........+. .....+.+++.+||+.||++|||++|+++.|+++
T Consensus 270 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 270 KLLKEGHRMDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp HHHHHTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111110011111 1234577899999999999999999999999876
No 143
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=7.8e-38 Score=344.37 Aligned_cols=246 Identities=11% Similarity=-0.019 Sum_probs=173.0
Q ss_pred cchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhcc--CCCCceeEE-------EEEecC
Q 002875 610 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV--RHKNLIRLL-------GFCYNR 675 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l--~H~niv~l~-------~~~~~~ 675 (872)
|...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.+++.+ +|||||+++ +++..+
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 33889999999999999995 589999999998643 3355677885544444 699988855 444432
Q ss_pred -----------------CeeEEEEcccCCCChHHHhhC---CCCHHHH------HHHHHHHHHHHHHHhhCCCCCcccCC
Q 002875 676 -----------------HQAYLLYDYLPNGNLSEKIRT---KRDWAAK------YKIVLGVARGLCFLHHDCYPAIPHGD 729 (872)
Q Consensus 676 -----------------~~~~lv~ey~~~g~L~~~l~~---~~~~~~~------~~i~~~i~~gl~~lH~~~~~~i~Hrd 729 (872)
...|+|||||+ |+|.+++.. ...+..+ ..++.|+++||+|||+. +|+|||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrD 219 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGH 219 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCc
Confidence 33799999999 899999975 2344455 67789999999999999 999999
Q ss_pred CCCCCeeeCCCCCeeEccccccccccccCCCCcccccccCchhhhcc--cCCcccccchhHHHHHHHHHcCCCCCCCCCC
Q 002875 730 LKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSS 807 (872)
Q Consensus 730 lk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~~~~~~~~~~~e~~~~--~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~ 807 (872)
|||+|||++.++.+||+|||+++...........+ ..|++||.... ..++.++|||||||++|||+||+.||.....
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t-~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVP-VTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSC-GGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCccCccCC-cCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 99999999999999999999997654322122223 66888898876 6789999999999999999999999985532
Q ss_pred CCCccccc-cccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002875 808 LQNKPIDG-LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 862 (872)
Q Consensus 808 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~ 862 (872)
........ ......... . ..+........+.+++.+||+.||++|||++|+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSWKRPSLRVPGTDS-L-AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCCCBCCTTSCCCCS-C-CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccchhhhhhhhccccc-c-chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 21111110 000000000 0 01111123356788999999999999999999975
No 144
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=331.30 Aligned_cols=252 Identities=19% Similarity=0.209 Sum_probs=188.6
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc------hhHHHHHHHHHHhhccC---CCCceeEEEEEecC
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVR---HKNLIRLLGFCYNR 675 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~------~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~ 675 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++ |||||+++++|...
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 9 SRYE--PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp -CCE--EEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cceE--EEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3455 889999999999999995 679999999986422 11345666777776654 99999999999865
Q ss_pred C-----eeEEEEcccCCCChHHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEc
Q 002875 676 H-----QAYLLYDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 746 (872)
Q Consensus 676 ~-----~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~ 746 (872)
. ..++||||++ |+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5899999997 5999999763 57889999999999999999999 99999999999999999999999
Q ss_pred cccccccccccCCC-CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCC---------------
Q 002875 747 EFGFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN--------------- 810 (872)
Q Consensus 747 dfg~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~--------------- 810 (872)
|||+++........ ...++.+|.+||......++.++||||+||++|||+||+.||........
T Consensus 163 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (308)
T 3g33_A 163 DFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242 (308)
T ss_dssp SCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred eCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 99999765433222 22356678889998888899999999999999999999999864332110
Q ss_pred cccccccc-ccccccccCC-CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 811 KPIDGLLG-EMYNENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 811 ~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
++...... ....+..... ....++....+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00000000 0000000000 00001223567889999999999999999999875
No 145
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-37 Score=336.87 Aligned_cols=239 Identities=15% Similarity=0.113 Sum_probs=191.9
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+..|..+++.+ +||||+++++++++.+..|+||||+
T Consensus 24 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~ 103 (353)
T 2i0e_A 24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 103 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCC
Confidence 889999999999999986 468899999997532 2355677889999887 7999999999999999999999999
Q ss_pred CCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--CCC
Q 002875 686 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSF 761 (872)
Q Consensus 686 ~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~--~~~ 761 (872)
++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 104 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 180 (353)
T 2i0e_A 104 NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT 180 (353)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCC
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCccccc
Confidence 99999999975 568888999999999999999999 99999999999999999999999999987532211 122
Q ss_pred cccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002875 762 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 841 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (872)
..++..|.+||+..+..++.++||||+||++|||+||+.||...... .....+.... ...+. ....++.+
T Consensus 181 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~~~~~ 250 (353)
T 2i0e_A 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN-VAYPK---SMSKEAVA 250 (353)
T ss_dssp CCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSCHHHHH
T ss_pred ccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCC-CCCCC---CCCHHHHH
Confidence 33566788899988888899999999999999999999998753311 1111111111 11111 12346778
Q ss_pred HHHHcccCCCCCCCC-----HHHHHHH
Q 002875 842 VALLCTRSTPSDRPS-----MEEALKL 863 (872)
Q Consensus 842 l~~~cl~~dp~~Rpt-----~~~v~~~ 863 (872)
++.+||+.||++||+ ++|++++
T Consensus 251 li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 251 ICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred HHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999999995 5777654
No 146
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.8e-35 Score=332.94 Aligned_cols=232 Identities=19% Similarity=0.202 Sum_probs=174.8
Q ss_pred ccCCcchhhhcCCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCcc
Q 002875 6 GALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAE 85 (872)
Q Consensus 6 ~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~ 85 (872)
+..+....+ ++.|++|++++|.++++ | +|..+++|++|+|++|.+++. | +..+++|++|++++|.+++. |
T Consensus 32 ~~~~~~~~~--l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 32 ATDTISEEQ--LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp TTSEEEHHH--HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred cccccChhH--cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--
Confidence 344445556 78888888888888865 4 688888888888888888864 3 78888888888888888764 3
Q ss_pred ccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCc
Q 002875 86 ISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ 165 (872)
Q Consensus 86 ~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~ 165 (872)
++++++|++|++++|.+.+. | ++.+++|++|++++|.+++. .++.+++|++|++++|...+.+ .+..+++|+
T Consensus 102 ~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~ 173 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLT 173 (457)
T ss_dssp CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCC
T ss_pred cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCC
Confidence 78888888888888888763 3 78888888888888888764 3778888888888888655555 366778888
Q ss_pred EEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEccccc
Q 002875 166 YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE 245 (872)
Q Consensus 166 ~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~ 245 (872)
.|++++|.+++ +| +..+++|+.|++++|.+++. .+..+++|++|++++|++++ +| +..+++|+.|++++|+
T Consensus 174 ~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 174 TLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp EEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSC
T ss_pred EEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCc
Confidence 88888888876 34 67778888888888888765 37777888888888888876 44 7777888888888888
Q ss_pred CCCCCCccccCCCCcceeeccc
Q 002875 246 MSGTVPESLVQLPSLEILFIWN 267 (872)
Q Consensus 246 l~~~~p~~l~~l~~L~~L~l~~ 267 (872)
+++..+ ..+++|+.|+++.
T Consensus 245 l~~~~~---~~l~~L~~L~l~~ 263 (457)
T 3bz5_A 245 LTELDV---STLSKLTTLHCIQ 263 (457)
T ss_dssp CSCCCC---TTCTTCCEEECTT
T ss_pred CCCcCH---HHCCCCCEEeccC
Confidence 876543 3444555554443
No 147
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.1e-37 Score=326.70 Aligned_cols=249 Identities=16% Similarity=0.158 Sum_probs=195.4
Q ss_pred hHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc-chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEE
Q 002875 603 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG-ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 603 ~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 680 (872)
++.+.|. ..+.||+|+||.||+|.. .+++.||+|++... ....+.+.+|++++++++||||++++++|.+.+..++
T Consensus 6 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 6 DINQYYT--LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp CHHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhEE--eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 3455666 889999999999999986 56789999999754 2346778899999999999999999999999999999
Q ss_pred EEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee---CCCCCeeEcccccccccc
Q 002875 681 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQ 755 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill---~~~~~~ki~dfg~~~~~~ 755 (872)
||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 84 VMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 9999999999998864 458889999999999999999999 99999999999999 788999999999987544
Q ss_pred ccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002875 756 LADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 834 (872)
Q Consensus 756 ~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (872)
.... ....++..|.+||...+. ++.++||||+||++|||+||+.||....... ....+..............
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 233 (277)
T 3f3z_A 161 PGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE------VMLKIREGTFTFPEKDWLN 233 (277)
T ss_dssp TTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCHHHHTT
T ss_pred CccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCCCCCCchhhhc
Confidence 3222 122355567888877654 7889999999999999999999987533211 0111111110000000112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 835 EIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 835 ~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
....+.+++.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 234 VSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 34567899999999999999999999853
No 148
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.8e-37 Score=335.54 Aligned_cols=260 Identities=18% Similarity=0.200 Sum_probs=196.0
Q ss_pred hhHHhhcCcchhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhc--cCCCCceeEEEEEecCC---
Q 002875 602 NDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGT--VRHKNLIRLLGFCYNRH--- 676 (872)
Q Consensus 602 ~~~~~~~~~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~--- 676 (872)
..+.+.|. ..+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++...+
T Consensus 38 ~~~~~~y~--~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIV--LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCE--EEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEE--EEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 33455676 889999999999999987 6999999999643 34556677888776 79999999999998775
Q ss_pred -eeEEEEcccCCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHh--------hCCCCCcccCCCCCCCeeeCCCCCeeEc
Q 002875 677 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLA 746 (872)
Q Consensus 677 -~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH--------~~~~~~i~Hrdlk~~Nill~~~~~~ki~ 746 (872)
..++||||+++|+|.+++.+ ..++.+.+.++.|++.||+||| +. +|+||||||+||+++.++.+||+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEEC
T ss_pred ceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEE
Confidence 78999999999999999976 4688999999999999999999 66 99999999999999999999999
Q ss_pred cccccccccccC------CCCcccccccCchhhhccc------CCcccccchhHHHHHHHHHcC----------CCCCCC
Q 002875 747 EFGFKYLTQLAD------GSFPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNA 804 (872)
Q Consensus 747 dfg~~~~~~~~~------~~~~~~~~~~~~~e~~~~~------~~~~~~Dv~S~Gvil~el~tg----------~~p~~~ 804 (872)
|||+++...... .....++..|.+||..... .++.++|||||||++|||+|| ..||..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~ 269 (342)
T 1b6c_B 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269 (342)
T ss_dssp CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence 999987544322 1122345567788877654 233679999999999999999 455543
Q ss_pred CCCCCCccccccccccccccccC-CCC--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 805 GSSLQNKPIDGLLGEMYNENEVG-SSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
...... ...............+ .+. ...+....+.+++.+||+.||++|||++|++++|+.+...
T Consensus 270 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 270 LVPSDP-SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TSCSSC-CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cCcCcc-cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 221110 0000000011110000 111 1134566788999999999999999999999999987543
No 149
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.3e-37 Score=327.72 Aligned_cols=247 Identities=17% Similarity=0.191 Sum_probs=194.2
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 681 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 681 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 6 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 6 DNYD--VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhh--hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3455 889999999999999985 568999999997543 2346678899999999999999999999999999999
Q ss_pred EcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC---eeEccccccccccc
Q 002875 682 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGFKYLTQL 756 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~---~ki~dfg~~~~~~~ 756 (872)
|||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999988865 468889999999999999999999 9999999999999986655 99999999865443
Q ss_pred cCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002875 757 ADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 835 (872)
Q Consensus 757 ~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (872)
... ....+...|.+||...+..++.++||||+||++|||+||+.||........ ............ .+.....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~----~~~~~~~ 234 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL--YAQIKAGAYDYP----SPEWDTV 234 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHTCCCCC----TTTTTTS
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH--HHHHHhccccCC----chhhccc
Confidence 222 122355668888988888889999999999999999999999875432110 000000011000 1111122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 836 IKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 836 ~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
...+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 235 TPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 3467789999999999999999999864
No 150
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.4e-37 Score=332.45 Aligned_cols=250 Identities=18% Similarity=0.272 Sum_probs=192.1
Q ss_pred hhhhccCCCCCceeeee-----cCCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecC--CeeEEEE
Q 002875 612 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 682 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~-----~~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 682 (872)
..+.||+|+||.||+|. ..+|+.||||++.... ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 78999999999999998 4578999999997532 2356788999999999999999999999876 6689999
Q ss_pred cccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC
Q 002875 683 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 759 (872)
Q Consensus 683 ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~ 759 (872)
||+++|+|.+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 105 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 181 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181 (302)
T ss_dssp ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCC
T ss_pred EeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccCCCc
Confidence 99999999999943 468889999999999999999999 999999999999999999999999999876543221
Q ss_pred -----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCC--------CCC-ccccccccccccccc
Q 002875 760 -----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS--------LQN-KPIDGLLGEMYNENE 825 (872)
Q Consensus 760 -----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~--------~~~-~~~~~~~~~~~~~~~ 825 (872)
....++..|.+||...+..++.++||||+||++|||+||+.|+..... ... ...............
T Consensus 182 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (302)
T 4e5w_A 182 YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKR 261 (302)
T ss_dssp EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCC
T ss_pred ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCC
Confidence 112244457788888777888899999999999999999887542110 000 000000000101110
Q ss_pred cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 826 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 826 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
...+ ......+.+++.+||+.||++|||++|+++.|+.+
T Consensus 262 ~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 262 LPCP---PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp CCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCC---CCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 1111 12234678999999999999999999999999865
No 151
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.1e-37 Score=350.22 Aligned_cols=250 Identities=16% Similarity=0.172 Sum_probs=197.7
Q ss_pred hhHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc---chhHHHHHHHHHHhhccCCCCceeEEEEEecCCe
Q 002875 602 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 677 (872)
Q Consensus 602 ~~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 677 (872)
..+.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++.+.+.
T Consensus 18 g~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 95 (486)
T 3mwu_A 18 GTFAERYN--IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS 95 (486)
T ss_dssp CHHHHHEE--EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred CChhcceE--EeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCE
Confidence 34556677 889999999999999986 57999999999643 2345678899999999999999999999999999
Q ss_pred eEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeC---CCCCeeEccccccc
Q 002875 678 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKY 752 (872)
Q Consensus 678 ~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~---~~~~~ki~dfg~~~ 752 (872)
.|+|||||++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 9999999999999998854 568888999999999999999999 999999999999995 45679999999987
Q ss_pred cccccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCc
Q 002875 753 LTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 831 (872)
Q Consensus 753 ~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (872)
....... ....++.+|.+||+..+ .++.++||||+||++|||+||..||.+..... ....+.........+.
T Consensus 173 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~ 245 (486)
T 3mwu_A 173 CFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGKYAFDLPQ 245 (486)
T ss_dssp TBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCSCSGG
T ss_pred ECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCCcc
Confidence 5543222 22336677888898765 48889999999999999999999987543211 1111111110111122
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 832 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 832 ~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+......+.+++.+||+.||++|||++|++++
T Consensus 246 ~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 23334567899999999999999999999975
No 152
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.1e-37 Score=338.10 Aligned_cols=249 Identities=20% Similarity=0.252 Sum_probs=193.9
Q ss_pred HHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch---------hHHHHHHHHHHhhcc-CCCCceeEEEEE
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTV-RHKNLIRLLGFC 672 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~---------~~~~~~~e~~~l~~l-~H~niv~l~~~~ 672 (872)
..+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.+++++ +||||+++++++
T Consensus 92 ~~~~y~--~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 92 FYQKYD--PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhcc--cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 334455 778999999999999997 4799999999875431 145678899999999 799999999999
Q ss_pred ecCCeeEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccc
Q 002875 673 YNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 750 (872)
Q Consensus 673 ~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~ 750 (872)
...+..|+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCc
Confidence 999999999999999999999874 568889999999999999999999 999999999999999999999999999
Q ss_pred cccccccCC-CCcccccccCchhhhcc------cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccc
Q 002875 751 KYLTQLADG-SFPAKIAWTESGEFYNA------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 823 (872)
Q Consensus 751 ~~~~~~~~~-~~~~~~~~~~~~e~~~~------~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 823 (872)
+........ ....++..|.+||+..+ ..++.++|||||||++|||+||+.||....... ....+...
T Consensus 247 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~------~~~~i~~~ 320 (365)
T 2y7j_A 247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL------MLRMIMEG 320 (365)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHT
T ss_pred ccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhC
Confidence 875543222 12235566788887653 257788999999999999999999987532111 00111111
Q ss_pred cccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 824 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
......+........+.+++.+||+.||++|||++|++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000001111223467889999999999999999999875
No 153
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3e-37 Score=351.08 Aligned_cols=243 Identities=14% Similarity=0.116 Sum_probs=194.8
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++.+.+..|+|||||+
T Consensus 188 ~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~ 267 (576)
T 2acx_A 188 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 267 (576)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCC
Confidence 788999999999999986 589999999997532 234567889999999999999999999999999999999999
Q ss_pred CCChHHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-CC
Q 002875 687 NGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SF 761 (872)
Q Consensus 687 ~g~L~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~-~~ 761 (872)
+|+|.+++... .++.+...++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 268 gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~ 344 (576)
T 2acx_A 268 GGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344 (576)
T ss_dssp SCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEEC
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCccccc
Confidence 99999999752 57888999999999999999999 999999999999999999999999999976543222 12
Q ss_pred cccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002875 762 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 841 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (872)
..++..|.+||+..+..++.++||||+||++|||+||..||......... .. +.......+...+ .....++.+
T Consensus 345 ~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~--~~-i~~~i~~~~~~~p---~~~s~~~~d 418 (576)
T 2acx_A 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR--EE-VERLVKEVPEEYS---ERFSPQARS 418 (576)
T ss_dssp CCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH--HH-HHHHHHHCCCCCC---TTSCHHHHH
T ss_pred cCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH--HH-HHHHhhcccccCC---ccCCHHHHH
Confidence 24567788899988878899999999999999999999999754321110 00 0011111101111 122346788
Q ss_pred HHHHcccCCCCCCC-----CHHHHHHH
Q 002875 842 VALLCTRSTPSDRP-----SMEEALKL 863 (872)
Q Consensus 842 l~~~cl~~dp~~Rp-----t~~~v~~~ 863 (872)
++.+||+.||++|| +++|++++
T Consensus 419 LI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 419 LCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 99999999999999 78998765
No 154
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.5e-36 Score=335.52 Aligned_cols=366 Identities=16% Similarity=0.172 Sum_probs=226.9
Q ss_pred CCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCC
Q 002875 28 NSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIP 107 (872)
Q Consensus 28 n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p 107 (872)
+......+..+.++++|++|++++|.+.+. | +|..+++|++|++++|.+++. | ++.+++|++|+|++|.+.+. |
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e
Confidence 344455566788899999999999999864 5 688999999999999998864 3 88899999999999998864 3
Q ss_pred cccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCC
Q 002875 108 SQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK 187 (872)
Q Consensus 108 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~ 187 (872)
|+++++|++|++++|.+++. | ++.+++|++|++++|.+.+. + ++++++|++|++++|...+.+ .+..+++
T Consensus 102 --~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~ 171 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQ 171 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTT
T ss_pred --cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCc
Confidence 88899999999999988763 3 66677777777777666552 2 555666666666666443333 2455555
Q ss_pred CCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeeccc
Q 002875 188 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWN 267 (872)
Q Consensus 188 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~ 267 (872)
|++|++++|++++. | +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+++|+.|++++
T Consensus 172 L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~ 242 (457)
T 3bz5_A 172 LTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSV 242 (457)
T ss_dssp CCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCS
T ss_pred CCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeC
Confidence 66666666655542 2 45555555555555555543 24455555555555555554 22 44445555555555
Q ss_pred ccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccC
Q 002875 268 NYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIP 347 (872)
Q Consensus 268 n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 347 (872)
|.+++.. +..+++|+.|+++.| +|+.|++++|.+.+.+|
T Consensus 243 N~l~~~~---~~~l~~L~~L~l~~n--------------------------------------~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 243 NPLTELD---VSTLSKLTTLHCIQT--------------------------------------DLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SCCSCCC---CTTCTTCCEEECTTC--------------------------------------CCSCCCCTTCTTCCEEE
T ss_pred CcCCCcC---HHHCCCCCEEeccCC--------------------------------------CCCEEECCCCccCCccc
Confidence 5444321 122333333333322 23334444444443333
Q ss_pred ccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccccCCCCCCCcCCcccCCCcccccccccccccCCCCCCCCcCCc
Q 002875 348 LKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKS 427 (872)
Q Consensus 348 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~ 427 (872)
+..+++|+.|++++|...+.+|. ...+|+.|++++| ++
T Consensus 282 --~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------------------------------~~ 319 (457)
T 3bz5_A 282 --AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------------------------------PK 319 (457)
T ss_dssp --CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------------------------------TT
T ss_pred --ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------------------------------cc
Confidence 23344444444444444333332 1123333333332 34
Q ss_pred cceeeccccccCCCCCCcccccccCcEEEccCccceeccchhccCCCCCCEEECCCCccccccCccccCCCCCcEEECcC
Q 002875 428 ISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSF 507 (872)
Q Consensus 428 l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~ 507 (872)
|+.++++.|.+++. + +.++++|+.|++++|++++ ++.|..|++++|.+.|. ..+..|+.+++++
T Consensus 320 L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~ 383 (457)
T 3bz5_A 320 LVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTN 383 (457)
T ss_dssp CCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBT
T ss_pred CCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCcccccc
Confidence 55666666666663 2 7778888888888888875 35667778888888876 2345678889999
Q ss_pred CeeeecCCCC
Q 002875 508 NDISGSIPSG 517 (872)
Q Consensus 508 N~l~~~~p~~ 517 (872)
|+++|.+|..
T Consensus 384 N~l~g~ip~~ 393 (457)
T 3bz5_A 384 NSLTIAVSPD 393 (457)
T ss_dssp TBEEEECCTT
T ss_pred CcEEEEcChh
Confidence 9999988864
No 155
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.3e-37 Score=329.56 Aligned_cols=245 Identities=18% Similarity=0.230 Sum_probs=195.2
Q ss_pred HHhhcCcchhhhccCCCCCceeeeecC-CCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEec--------
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-------- 674 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-------- 674 (872)
+...|. ..+.||+|+||.||+|... +|+.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFK--EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEE--EEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccc--eeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 445566 8899999999999999974 89999999997543 356789999999999999999999864
Q ss_pred --------CCeeEEEEcccCCCChHHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC
Q 002875 675 --------RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 742 (872)
Q Consensus 675 --------~~~~~lv~ey~~~g~L~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~ 742 (872)
....++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTE
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCC
Confidence 3458999999999999999963 468889999999999999999999 9999999999999999999
Q ss_pred eeEccccccccccccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccc
Q 002875 743 PHLAEFGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 821 (872)
Q Consensus 743 ~ki~dfg~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 821 (872)
+||+|||+++....... ....+...|.+||......++.++|||||||++|||+||..|+..... ......
T Consensus 161 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--------~~~~~~ 232 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK--------FFTDLR 232 (284)
T ss_dssp EEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH--------HHHHHH
T ss_pred EEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH--------HHHHhh
Confidence 99999999876543222 222355567888988888889999999999999999999887642110 000111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 822 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
... . ... ....+.+++.+||+.||++|||++|++++|..++..
T Consensus 233 ~~~-~--~~~---~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 233 DGI-I--SDI---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp TTC-C--CTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred ccc-c--ccc---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 110 1 111 123467889999999999999999999999877543
No 156
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6e-37 Score=339.93 Aligned_cols=255 Identities=13% Similarity=0.117 Sum_probs=196.1
Q ss_pred cchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCC--eeEEEEcc
Q 002875 610 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDY 684 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ey 684 (872)
|...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~ 90 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence 33888999999999999986 469999999997533 23567788999999999999999999998755 78999999
Q ss_pred cCCCChHHHhhCC-----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee----CCCCCeeEcccccccccc
Q 002875 685 LPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKYLTQ 755 (872)
Q Consensus 685 ~~~g~L~~~l~~~-----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill----~~~~~~ki~dfg~~~~~~ 755 (872)
|++|+|.+++... .++.+.+.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++...
T Consensus 91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999999762 68889999999999999999999 99999999999999 777889999999997654
Q ss_pred ccCC-CCcccccccCchhhhcc--------cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcc--ccccccc-----
Q 002875 756 LADG-SFPAKIAWTESGEFYNA--------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP--IDGLLGE----- 819 (872)
Q Consensus 756 ~~~~-~~~~~~~~~~~~e~~~~--------~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~--~~~~~~~----- 819 (872)
.... ....++..|.+||.+.. ..++.++|||||||++|||+||+.||.......... .......
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence 3222 12234556778887654 456788999999999999999999986432211100 0000000
Q ss_pred -----------c-ccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 820 -----------M-YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 820 -----------~-~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
. +.................+.+++.+||+.||++|||++|+++.+..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 0 00000111112245566788999999999999999999999988765
No 157
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.1e-37 Score=345.66 Aligned_cols=251 Identities=15% Similarity=0.128 Sum_probs=187.7
Q ss_pred hhHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch---------hHHHHHHHHHHhhccCCCCceeEEEE
Q 002875 602 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGF 671 (872)
Q Consensus 602 ~~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~~~ 671 (872)
..+.+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ....+.+|++++++++|||||+++++
T Consensus 131 ~~~~~~y~--~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 208 (419)
T 3i6u_A 131 KALRDEYI--MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 208 (419)
T ss_dssp HHHHTTEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEE
T ss_pred hhhhccEE--EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 44555666 889999999999999985 6789999999975321 12347889999999999999999999
Q ss_pred EecCCeeEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC---CCeeEc
Q 002875 672 CYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLA 746 (872)
Q Consensus 672 ~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~---~~~ki~ 746 (872)
+.. +..|+|||||++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.+ ..+||+
T Consensus 209 ~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 209 FDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp EES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred Eec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 865 457999999999999999865 457889999999999999999999 99999999999999754 459999
Q ss_pred cccccccccccCC-CCcccccccCchhhhc---ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccc
Q 002875 747 EFGFKYLTQLADG-SFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 822 (872)
Q Consensus 747 dfg~~~~~~~~~~-~~~~~~~~~~~~e~~~---~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 822 (872)
|||+++....... ....++..|++||+.. ...++.++||||+||++|||+||..||......... . ..+..
T Consensus 285 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~--~---~~i~~ 359 (419)
T 3i6u_A 285 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL--K---DQITS 359 (419)
T ss_dssp CSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCH--H---HHHHT
T ss_pred ecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHH--H---HHHhc
Confidence 9999976543221 1223556678888764 356788999999999999999999998754322110 0 01111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 823 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
......++........+.+++.+||+.||++|||++|++++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 10000011112234568899999999999999999999875
No 158
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=343.25 Aligned_cols=242 Identities=14% Similarity=0.067 Sum_probs=190.6
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+.++.+++|||||++++++++.+..|+|||||+
T Consensus 65 ~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 65 ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 888999999999999986 579999999997532 223457889999999999999999999999999999999999
Q ss_pred CCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC---C
Q 002875 687 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---S 760 (872)
Q Consensus 687 ~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~---~ 760 (872)
+|+|.+++.+ ..++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 145 gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~ 221 (412)
T 2vd5_A 145 GGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSL 221 (412)
T ss_dssp SCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECS
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCCccccc
Confidence 9999999965 468888899999999999999999 999999999999999999999999999976543221 1
Q ss_pred CcccccccCchhhhc-------ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccccc-ccCCCCch
Q 002875 761 FPAKIAWTESGEFYN-------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSL 832 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~-------~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 832 (872)
...++..|.+||+.. ...++.++||||+||++|||+||+.||....... ....+.... ....+...
T Consensus 222 ~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~~~~~p~~~ 295 (412)
T 2vd5_A 222 VAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE------TYGKIVHYKEHLSLPLVD 295 (412)
T ss_dssp SCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCCCC---
T ss_pred eeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhcccCcCCCccc
Confidence 234566788888876 3457889999999999999999999997543211 111111100 00001111
Q ss_pred HHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 002875 833 QDEIKLVLDVALLCTRSTPSDR---PSMEEALKL 863 (872)
Q Consensus 833 ~~~~~~~~~l~~~cl~~dp~~R---pt~~~v~~~ 863 (872)
.....++.+++.+||. +|++| |+++|++++
T Consensus 296 ~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 296 EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp -CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 1233567889999999 99988 699999865
No 159
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.9e-37 Score=328.98 Aligned_cols=248 Identities=19% Similarity=0.232 Sum_probs=185.4
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
..+.||+|+||.||+|+.. ..||||+++... ...+.+.+|++++++++||||+++++++ ..+..++||||+++|
T Consensus 28 ~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 28 VGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 8899999999999999864 359999997532 3356788999999999999999999976 455689999999999
Q ss_pred ChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC----CC
Q 002875 689 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----SF 761 (872)
Q Consensus 689 ~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~----~~ 761 (872)
+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 105 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 181 (289)
T 3og7_A 105 SLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181 (289)
T ss_dssp EHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----------------
T ss_pred cHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccccccccc
Confidence 99999964 357888999999999999999999 999999999999999999999999999865432111 11
Q ss_pred cccccccCchhhhc---ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002875 762 PAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 762 ~~~~~~~~~~e~~~---~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
..++..|.+||... ...++.++||||+||++|||+||+.||......... ..........+.. ..........
T Consensus 182 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~ 257 (289)
T 3og7_A 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-IEMVGRGSLSPDL---SKVRSNCPKR 257 (289)
T ss_dssp --CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH-HHHHHHTSCCCCT---TSSCTTSCHH
T ss_pred cCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH-HHHhcccccCcch---hhccccCCHH
Confidence 22455677888775 556788999999999999999999998754321110 0000000111110 1111123356
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 839 VLDVALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
+.+++.+||+.||++|||++|+++.|+++..
T Consensus 258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 258 MKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 7899999999999999999999999998865
No 160
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.2e-37 Score=326.47 Aligned_cols=247 Identities=18% Similarity=0.176 Sum_probs=193.6
Q ss_pred hhcCcchhhhccCCCCCceeeeecC-CCcEEEEEEeeccch-------hHHHHHHHHHHhhccCCCCceeEEEEEecCCe
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 677 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 677 (872)
+.|. ..+.||+|+||.||+|... +|+.||||.+..... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 5 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 5 DHYE--MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 82 (283)
T ss_dssp HHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhh--hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence 4455 8899999999999999864 799999999875321 25678999999999999999999999999999
Q ss_pred eEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC----CeeEcccccc
Q 002875 678 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEFGFK 751 (872)
Q Consensus 678 ~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~----~~ki~dfg~~ 751 (872)
.++||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999999964 468899999999999999999999 999999999999998877 7999999998
Q ss_pred ccccccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002875 752 YLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 830 (872)
Q Consensus 752 ~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (872)
........ ....+...|.+||......++.++||||+||++|||+||+.||....... ....+..........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~ 233 (283)
T 3bhy_A 160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE------TLTNISAVNYDFDEE 233 (283)
T ss_dssp EECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTCCCCCHH
T ss_pred eeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH------HHHHhHhcccCCcch
Confidence 75433221 11224556788898887888999999999999999999999987533111 000110000000000
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 831 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 831 ~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
........+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 234 YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 011223467889999999999999999999874
No 161
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.6e-37 Score=350.19 Aligned_cols=239 Identities=13% Similarity=0.056 Sum_probs=185.3
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.++++++|||||+++++|.+.+..|+|||||+
T Consensus 152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 889999999999999985 679999999997532 234566788999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhh-CCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--CCC
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSF 761 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~-~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~--~~~ 761 (872)
+|+|.+++.. ..++.+...++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 232 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 308 (446)
T 4ejn_A 232 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 308 (446)
T ss_dssp SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CC
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCccccc
Confidence 9999999865 45788899999999999999998 7 99999999999999999999999999987532221 122
Q ss_pred cccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002875 762 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 841 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (872)
..++..|.+||+..+..++.++||||+||++|||+||+.||....... ....+.... ...+. ....++.+
T Consensus 309 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~---~~~~~~~~ 378 (446)
T 4ejn_A 309 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK------LFELILMEE-IRFPR---TLGPEAKS 378 (446)
T ss_dssp SSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCT---TSCHHHHH
T ss_pred ccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH------HHHHHHhCC-CCCCc---cCCHHHHH
Confidence 335667889999888889999999999999999999999997543211 111111111 11111 12245778
Q ss_pred HHHHcccCCCCCCC-----CHHHHHHH
Q 002875 842 VALLCTRSTPSDRP-----SMEEALKL 863 (872)
Q Consensus 842 l~~~cl~~dp~~Rp-----t~~~v~~~ 863 (872)
++.+||+.||++|| +++|++++
T Consensus 379 li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 379 LLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 99999999999999 99999864
No 162
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.4e-37 Score=332.94 Aligned_cols=252 Identities=19% Similarity=0.237 Sum_probs=194.5
Q ss_pred hhhhccCCCCCceeeeec-----CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecC--CeeEEEE
Q 002875 612 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 682 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-----~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 682 (872)
..+.||+|+||.||++.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+. ...++||
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 788999999999987753 478999999997543 3356788999999999999999999999874 6789999
Q ss_pred cccCCCChHHHhhCC-CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--
Q 002875 683 DYLPNGNLSEKIRTK-RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 759 (872)
Q Consensus 683 ey~~~g~L~~~l~~~-~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~-- 759 (872)
||+++|+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 191 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 191 (318)
T ss_dssp CCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEE
T ss_pred ecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccccccc
Confidence 999999999999764 68899999999999999999999 999999999999999999999999999876543221
Q ss_pred ---CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCC----Ccc----ccccccccccccccCC
Q 002875 760 ---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ----NKP----IDGLLGEMYNENEVGS 828 (872)
Q Consensus 760 ---~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~----~~~----~~~~~~~~~~~~~~~~ 828 (872)
....++.+|.+||......++.++||||+||++|||+||+.||....... .+. ......+.......
T Consensus 192 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 269 (318)
T 3lxp_A 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER-- 269 (318)
T ss_dssp EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC--
T ss_pred ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC--
Confidence 11223445778888887788899999999999999999999876321100 000 00000011111100
Q ss_pred CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 829 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 829 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
.+........+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 270 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 0111122356788999999999999999999999998763
No 163
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-37 Score=333.82 Aligned_cols=240 Identities=16% Similarity=0.149 Sum_probs=186.0
Q ss_pred chhhhccCCCCCceeeeecCCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCC--CCceeEEEEEecCCeeEEEEccc
Q 002875 611 TECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRH--KNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
...+.||+|+||.||+|...+|+.||||++.... ...+.+.+|+.++++++| ||||++++++.+++..|+||| +
T Consensus 12 ~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~ 90 (343)
T 3dbq_A 12 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-C 90 (343)
T ss_dssp EEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-C
T ss_pred EEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-C
Confidence 3889999999999999999999999999997532 234678899999999987 999999999999999999999 5
Q ss_pred CCCChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC----
Q 002875 686 PNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---- 759 (872)
Q Consensus 686 ~~g~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~---- 759 (872)
.+|+|.+++... .++.++..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++.......
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~ 166 (343)
T 3dbq_A 91 GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVK 166 (343)
T ss_dssp CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---------
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccccccC
Confidence 678999999763 57888999999999999999999 999999999999997 57899999999976543221
Q ss_pred CCcccccccCchhhhcc-----------cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccccccc-C
Q 002875 760 SFPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV-G 827 (872)
Q Consensus 760 ~~~~~~~~~~~~e~~~~-----------~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~ 827 (872)
....++.+|.+||+... ..++.++|||||||++|||+||+.||....... .......++... .
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~~~~~~~~~~ 241 (343)
T 3dbq_A 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAIIDPNHEIE 241 (343)
T ss_dssp ---CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----HHHHHHHCTTSCCC
T ss_pred CCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-----HHHHHHhcCCcccC
Confidence 12235667888888754 567888999999999999999999986432110 001111111100 0
Q ss_pred CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 828 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 828 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.+... ...+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~---~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 242 FPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CcccC---CHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11111 2357789999999999999999999875
No 164
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.2e-37 Score=329.97 Aligned_cols=249 Identities=18% Similarity=0.186 Sum_probs=194.9
Q ss_pred HHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch-hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEE
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 681 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 681 (872)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFI--FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccce--eeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 445566 889999999999999986 4799999999975432 345688999999999999999999999999999999
Q ss_pred EcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee---CCCCCeeEccccccccccc
Q 002875 682 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQL 756 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill---~~~~~~ki~dfg~~~~~~~ 756 (872)
|||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999999999864 457888999999999999999999 99999999999999 7888999999999875433
Q ss_pred cCCCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 757 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 757 ~~~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
.......++..|.+||...+..++.++||||+||++|||+||..||....... ....+.........+......
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~ 235 (304)
T 2jam_A 162 GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK------LFEKIKEGYYEFESPFWDDIS 235 (304)
T ss_dssp BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHCCCCCCTTTTTTSC
T ss_pred CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCCCCCCccccccCC
Confidence 22222224566788898888888999999999999999999999987533111 001111110000011112233
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 837 KLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
..+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 236 ESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 567889999999999999999999864
No 165
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=6.2e-37 Score=339.63 Aligned_cols=250 Identities=17% Similarity=0.156 Sum_probs=191.2
Q ss_pred chhhhccCC--CCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcc
Q 002875 611 TECEEAARP--QSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 684 (872)
Q Consensus 611 ~~~~~~g~g--~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 684 (872)
...+.||+| +||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++.+++..|+||||
T Consensus 28 ~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 107 (389)
T 3gni_B 28 ELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 107 (389)
T ss_dssp EEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEc
Confidence 388999999 9999999996 479999999997543 2356778899999999999999999999999999999999
Q ss_pred cCCCChHHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--
Q 002875 685 LPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 758 (872)
Q Consensus 685 ~~~g~L~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~-- 758 (872)
|++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.......
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~ 184 (389)
T 3gni_B 108 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184 (389)
T ss_dssp CTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEE
T ss_pred cCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecccccc
Confidence 999999999864 357888999999999999999999 99999999999999999999999999875432111
Q ss_pred -------CCCcccccccCchhhhcc--cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc--cccccccccccc--
Q 002875 759 -------GSFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI--DGLLGEMYNENE-- 825 (872)
Q Consensus 759 -------~~~~~~~~~~~~~e~~~~--~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~--~~~~~~~~~~~~-- 825 (872)
.....++..|.+||.... ..++.++||||+||++|||+||+.||.+......... ........+...
T Consensus 185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (389)
T 3gni_B 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 264 (389)
T ss_dssp CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------------
T ss_pred ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccc
Confidence 111234455778888765 5788999999999999999999999975432211000 000000000000
Q ss_pred --------------------------------cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 826 --------------------------------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 826 --------------------------------~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
....+........+.+++.+||+.||++|||++|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 265 AEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -----------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00000111233568899999999999999999999876
No 166
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.3e-37 Score=338.39 Aligned_cols=241 Identities=16% Similarity=0.139 Sum_probs=187.0
Q ss_pred cchhhhccCCCCCceeeeecCCCcEEEEEEeeccc---hhHHHHHHHHHHhhccC--CCCceeEEEEEecCCeeEEEEcc
Q 002875 610 STECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNRHQAYLLYDY 684 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ey 684 (872)
|...+.||+|+||.||+|...+|+.||||++.... ...+.+.+|++++++++ |||||++++++..++..|+|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E- 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence 34889999999999999998889999999997532 33567889999999996 5999999999999999999999
Q ss_pred cCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC---
Q 002875 685 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 759 (872)
Q Consensus 685 ~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--- 759 (872)
+.+|+|.+++.. ..++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.......
T Consensus 137 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~ 212 (390)
T 2zmd_A 137 CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 212 (390)
T ss_dssp CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--------
T ss_pred cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcccc
Confidence 568899999975 357788899999999999999999 999999999999996 57899999999976543221
Q ss_pred -CCcccccccCchhhhcc-----------cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccccccc-
Q 002875 760 -SFPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV- 826 (872)
Q Consensus 760 -~~~~~~~~~~~~e~~~~-----------~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 826 (872)
....++.+|.+||+... ..++.++|||||||++|||+||+.||....... ..+..+.++...
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-----~~~~~~~~~~~~~ 287 (390)
T 2zmd_A 213 KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAIIDPNHEI 287 (390)
T ss_dssp -CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-----HHHHHHHCTTSCC
T ss_pred CCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH-----HHHHHHhCccccC
Confidence 12235667888888754 357889999999999999999999987432110 011111111101
Q ss_pred CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 827 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 827 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
..+... ..++.+++.+||+.||++|||++|++++
T Consensus 288 ~~~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 288 EFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCccc---hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 001111 2457789999999999999999999865
No 167
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2e-37 Score=336.86 Aligned_cols=242 Identities=20% Similarity=0.251 Sum_probs=190.7
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 680 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||+++++|.+++..++
T Consensus 54 ~~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 131 (348)
T 1u5q_A 54 KLFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 131 (348)
T ss_dssp HHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhee--eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence 3455 778999999999999985 789999999997532 224568899999999999999999999999999999
Q ss_pred EEcccCCCChHHHhh---CCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc
Q 002875 681 LYDYLPNGNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 681 v~ey~~~g~L~~~l~---~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~ 757 (872)
||||++ |++.+++. ...++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 132 v~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 132 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp EEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred EEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 999997 68888874 3468899999999999999999999 9999999999999999999999999998765332
Q ss_pred CCCCcccccccCchhhhc---ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccccc-ccCCCCchH
Q 002875 758 DGSFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQ 833 (872)
Q Consensus 758 ~~~~~~~~~~~~~~e~~~---~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 833 (872)
. ...++.+|.+||... ...++.++|||||||++|||+||+.||........ ...+.... +.....
T Consensus 208 ~--~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~--- 276 (348)
T 1u5q_A 208 N--SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQNESPALQSG--- 276 (348)
T ss_dssp C--CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCCCCCCT---
T ss_pred C--cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHHhcCCCCCCCC---
Confidence 1 223556678888764 45678899999999999999999999875432110 00111100 000011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002875 834 DEIKLVLDVALLCTRSTPSDRPSMEEALKLL 864 (872)
Q Consensus 834 ~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L 864 (872)
.....+.+++.+||+.||++|||++|++++.
T Consensus 277 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 277 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred CCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 1124567889999999999999999998654
No 168
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=6.3e-37 Score=329.74 Aligned_cols=247 Identities=18% Similarity=0.154 Sum_probs=186.4
Q ss_pred hhhccCCCCCceeeeec-CCCcEEEEEEeeccc-hhHHHHHHHHHHhhc-cCCCCceeEEEEEecCCeeEEEEcccCCCC
Q 002875 613 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 689 (872)
Q Consensus 613 ~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~-l~H~niv~l~~~~~~~~~~~lv~ey~~~g~ 689 (872)
.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++.+ .+||||+++++++.+++..|+||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 36799999999999985 589999999997543 235678889999988 479999999999999999999999999999
Q ss_pred hHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC---eeEccccccccccccC------
Q 002875 690 LSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGFKYLTQLAD------ 758 (872)
Q Consensus 690 L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~---~ki~dfg~~~~~~~~~------ 758 (872)
|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++......
T Consensus 98 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 174 (316)
T 2ac3_A 98 ILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174 (316)
T ss_dssp HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------------
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccccc
Confidence 9999965 468888999999999999999999 9999999999999998765 9999999986543211
Q ss_pred ---CCCcccccccCchhhhcc-----cCCcccccchhHHHHHHHHHcCCCCCCCCCCCC-Cccccc--------cccccc
Q 002875 759 ---GSFPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ-NKPIDG--------LLGEMY 821 (872)
Q Consensus 759 ---~~~~~~~~~~~~~e~~~~-----~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~-~~~~~~--------~~~~~~ 821 (872)
.....++..|.+||.... ..++.++||||+||++|||+||+.||....... .+.... ....+.
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 254 (316)
T 2ac3_A 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQ 254 (316)
T ss_dssp -------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHH
T ss_pred ccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHh
Confidence 011224556778887754 457788999999999999999999997543221 111000 001111
Q ss_pred cccccCCCC-chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 822 NENEVGSSS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 822 ~~~~~~~~~-~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
... ...+. ........+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 255 EGK-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HCC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccC-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111 00010 011223568899999999999999999999985
No 169
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.8e-37 Score=337.88 Aligned_cols=193 Identities=16% Similarity=0.171 Sum_probs=167.1
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccC-----CCCceeEEEEEecCCeeE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----HKNLIRLLGFCYNRHQAY 679 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~~~~~~~~~~~ 679 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+..|+.++++++ |||||++++++...+..+
T Consensus 35 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 35 NAFL--VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred CEEE--EEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 3455 889999999999999986 67899999999865555667788899998886 999999999999999999
Q ss_pred EEEcccCCCChHHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC----------------
Q 002875 680 LLYDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---------------- 739 (872)
Q Consensus 680 lv~ey~~~g~L~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~---------------- 739 (872)
+||||+ +|+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++.
T Consensus 113 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~ 188 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188 (360)
T ss_dssp EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTC
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccccc
Confidence 999999 89999998752 57888999999999999999999 9999999999999985
Q ss_pred ---------CCCeeEccccccccccccCCCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCC
Q 002875 740 ---------NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 805 (872)
Q Consensus 740 ---------~~~~ki~dfg~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~ 805 (872)
++.+||+|||+++....... ...++..|.+||...+..++.++||||+||++|||+||+.||...
T Consensus 189 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 189 KKIQIYRTKSTGIKLIDFGCATFKSDYHG-SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp CEEEEEEESCCCEEECCCTTCEETTSCCC-SCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccCCCCEEEEeccCceecCCCCc-CccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 78899999999976443322 223456688899988888999999999999999999999998753
No 170
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.6e-38 Score=338.34 Aligned_cols=251 Identities=16% Similarity=0.142 Sum_probs=188.5
Q ss_pred HHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch----hHHHHHHHHHHhhccCCCCceeEEEEEecCC--
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-- 676 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-- 676 (872)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.++++++|||||++++++...+
T Consensus 10 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 87 (311)
T 3ork_A 10 LSDRYE--LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA 87 (311)
T ss_dssp ETTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred ecCcEE--EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence 334455 889999999999999995 7899999999975422 2456789999999999999999999987654
Q ss_pred --eeEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccc
Q 002875 677 --QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 752 (872)
Q Consensus 677 --~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~ 752 (872)
..|+||||+++|+|.++++. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred CcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 34999999999999999964 468889999999999999999999 99999999999999999999999999987
Q ss_pred cccccCCC-----CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccC
Q 002875 753 LTQLADGS-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 827 (872)
Q Consensus 753 ~~~~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (872)
........ ...++..|.+||...+..++.++||||+||++|||+||+.||....... ............
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~~ 238 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPIP 238 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhcCCCCC
Confidence 54332111 1224566888898888888999999999999999999999986533211 000111111000
Q ss_pred CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHH-HHHc
Q 002875 828 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL-KLLS 865 (872)
Q Consensus 828 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~-~~L~ 865 (872)
..........++.+++.+||+.||++||++.+++ +.+.
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 0000011235677899999999999999766655 4443
No 171
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.5e-37 Score=324.54 Aligned_cols=238 Identities=17% Similarity=0.161 Sum_probs=172.1
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 17 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~- 95 (275)
T 2eue_A 17 IVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp CCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-
T ss_pred EEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-
Confidence 889999999999999985 679999999996532 23557889999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-CCcc
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 763 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~-~~~~ 763 (872)
+|++.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....... ....
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 172 (275)
T 2eue_A 96 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 172 (275)
T ss_dssp CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------------
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcccccCCC
Confidence 6788888765 457889999999999999999999 999999999999999999999999999875433221 1223
Q ss_pred cccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002875 764 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 842 (872)
Q Consensus 764 ~~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 842 (872)
++..|.+||...+..+ +.++||||+||++|||+||+.||....... ....+.... ...+. .....+.++
T Consensus 173 ~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~---~~~~~~~~l 242 (275)
T 2eue_A 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV------LFKNISNGV-YTLPK---FLSPGAAGL 242 (275)
T ss_dssp --CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC-CCCCT---TSCHHHHHH
T ss_pred CCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCc---cCCHHHHHH
Confidence 4556788888766544 688999999999999999999986432110 001111111 01111 122457789
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 002875 843 ALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 843 ~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+.+||+.||++|||++|++++
T Consensus 243 i~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 243 IKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHhhcCHhHCCCHHHHhhC
Confidence 999999999999999999854
No 172
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.1e-37 Score=331.42 Aligned_cols=248 Identities=17% Similarity=0.224 Sum_probs=194.7
Q ss_pred hcCcchhhhccCCCCCceeeeecC------CCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCee
Q 002875 607 SFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 678 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~~------~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 678 (872)
.|. ..+.||+|+||.||+|+.. +++.||||.+.... .....+.+|++++++++||||+++++++.+.+..
T Consensus 26 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 26 KIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GEE--EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hee--eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 355 8899999999999999753 57899999997533 2345688999999999999999999999999999
Q ss_pred EEEEcccCCCChHHHhhC------------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEc
Q 002875 679 YLLYDYLPNGNLSEKIRT------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 746 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~------------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~ 746 (872)
++||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEEC
Confidence 999999999999999864 237888999999999999999999 99999999999999999999999
Q ss_pred cccccccccccCCC----CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccc
Q 002875 747 EFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 821 (872)
Q Consensus 747 dfg~~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 821 (872)
|||+++........ ...++..|.+||...+..++.++||||+||++|||+| |..||....... ....+.
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~ 254 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ------VLRFVM 254 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH------HHHHHH
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH------HHHHHH
Confidence 99998754322211 1123445778898887788999999999999999999 666665322110 011111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 822 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
......... .....+.+++.+||+.||++|||++|++++|+.+.
T Consensus 255 ~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 255 EGGLLDKPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp TTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred cCCcCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 111011111 22345778999999999999999999999998764
No 173
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.5e-37 Score=323.64 Aligned_cols=243 Identities=19% Similarity=0.235 Sum_probs=187.3
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecC-CeeEEEEcccCCCCh
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLYDYLPNGNL 690 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-~~~~lv~ey~~~g~L 690 (872)
..+.||+|+||.||+|.. +|+.||||.++... ..+.+.+|++++++++||||+++++++.+. +..++||||+++|+|
T Consensus 25 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EEeEEecCCCceEEEEEE-cCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 889999999999999987 58999999997543 456788999999999999999999997654 578999999999999
Q ss_pred HHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCCccccc
Q 002875 691 SEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 766 (872)
Q Consensus 691 ~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~~~~~~ 766 (872)
.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ..+..
T Consensus 103 ~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~ 178 (278)
T 1byg_A 103 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-GKLPV 178 (278)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------------CCT
T ss_pred HHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccccC-CCccc
Confidence 9999753 57888899999999999999999 9999999999999999999999999998754332221 12334
Q ss_pred ccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002875 767 WTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 845 (872)
Q Consensus 767 ~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 845 (872)
.|.+||......++.++||||+||++|||+| |..||....... ....+......... ......+.+++.+
T Consensus 179 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~l~~li~~ 249 (278)
T 1byg_A 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------VVPRVEKGYKMDAP---DGCPPAVYEVMKN 249 (278)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG------HHHHHTTTCCCCCC---TTCCHHHHHHHHH
T ss_pred cccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHhcCCCCCCc---ccCCHHHHHHHHH
Confidence 5778888887788999999999999999999 877776432111 01111111001111 1223467788999
Q ss_pred cccCCCCCCCCHHHHHHHHcccCC
Q 002875 846 CTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 846 cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
||+.||++|||++|+++.|+.++.
T Consensus 250 ~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 250 CWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcCChhhCCCHHHHHHHHHHHHh
Confidence 999999999999999999988754
No 174
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.1e-37 Score=343.93 Aligned_cols=232 Identities=17% Similarity=0.138 Sum_probs=179.9
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeecc----chhHHHHHHHH---HHhhccCCCCceeEE-------EEEecCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFI---TRIGTVRHKNLIRLL-------GFCYNRH 676 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~----~~~~~~~~~e~---~~l~~l~H~niv~l~-------~~~~~~~ 676 (872)
..+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|+ +.+++++|||||+++ +++.+++
T Consensus 77 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 77 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred EcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 788999999999999996 67999999999742 23457788999 556667899999998 6666553
Q ss_pred -----------------eeEEEEcccCCCChHHHhhCC--C-C------HHHHHHHHHHHHHHHHHHhhCCCCCcccCCC
Q 002875 677 -----------------QAYLLYDYLPNGNLSEKIRTK--R-D------WAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 730 (872)
Q Consensus 677 -----------------~~~lv~ey~~~g~L~~~l~~~--~-~------~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdl 730 (872)
..|+||||+ +|+|.+++... . . +..+..|+.|+++||+|||+. +|+||||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDi 232 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 232 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 278999999 68999999752 2 2 467788999999999999999 9999999
Q ss_pred CCCCeeeCCCCCeeEccccccccccccCCCCcccccccCchhhhccc-----------CCcccccchhHHHHHHHHHcCC
Q 002875 731 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-----------KEEMYMDVYGFGEIILEILTNG 799 (872)
Q Consensus 731 k~~Nill~~~~~~ki~dfg~~~~~~~~~~~~~~~~~~~~~~e~~~~~-----------~~~~~~Dv~S~Gvil~el~tg~ 799 (872)
||+||+++.++.+||+|||+++....... ...+ ..|.+||+.... .++.++|||||||++|||+||+
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~ 310 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVV-SSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEE-CCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CHHHEEEcCCCCEEEEechhheecCCccc-CCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC
Confidence 99999999999999999999975432221 2234 668888988776 7899999999999999999999
Q ss_pred CCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 800 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 800 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.||........ ........ + ....++.+++.+||+.||++|||++|++++
T Consensus 311 ~Pf~~~~~~~~------~~~~~~~~-----~---~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 311 LPITKDAALGG------SEWIFRSC-----K---NIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp CCC------CC------SGGGGSSC-----C---CCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred CCCcccccccc------hhhhhhhc-----c---CCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 99875432211 11111110 1 112457789999999999999999999863
No 175
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.3e-37 Score=350.58 Aligned_cols=248 Identities=17% Similarity=0.203 Sum_probs=191.9
Q ss_pred HHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeE
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 679 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 679 (872)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||+++++|.+.+..|
T Consensus 35 ~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 112 (494)
T 3lij_A 35 LSEMYQ--RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY 112 (494)
T ss_dssp HHHHEE--EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hhcCeE--EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 445566 889999999999999986 578999999997532 23567889999999999999999999999999999
Q ss_pred EEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC---CCeeEccccccccc
Q 002875 680 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLT 754 (872)
Q Consensus 680 lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~---~~~ki~dfg~~~~~ 754 (872)
+|||||++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.. +.+||+|||+++..
T Consensus 113 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 113 LVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 99999999999998864 467888899999999999999999 99999999999999764 55999999998765
Q ss_pred cccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002875 755 QLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 833 (872)
Q Consensus 755 ~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (872)
..... ....++.+|.+||+.. ..++.++||||+||++|||+||..||.+..... ....+.........+.+.
T Consensus 190 ~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 262 (494)
T 3lij_A 190 ENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE------ILRKVEKGKYTFDSPEWK 262 (494)
T ss_dssp BTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCSGGGT
T ss_pred CCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCchhcc
Confidence 43322 2223566788889876 458889999999999999999999987543211 111111111011111222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 834 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 834 ~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.....+.+++.+||+.||++|||++|++++
T Consensus 263 ~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 263 NVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 334567899999999999999999999864
No 176
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-37 Score=327.83 Aligned_cols=246 Identities=17% Similarity=0.195 Sum_probs=192.0
Q ss_pred chhhhccCCCCCceeeeecC----CCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCee-EEEEc
Q 002875 611 TECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA-YLLYD 683 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~----~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~-~lv~e 683 (872)
...+.||+|+||.||+|... ++..||||.+.... ...+.+.+|+.++++++|||||++++++.+.+.. ++|||
T Consensus 24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 103 (298)
T 3pls_A 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP 103 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence 36688999999999999842 23479999987532 3456788999999999999999999999876654 99999
Q ss_pred ccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--
Q 002875 684 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 758 (872)
Q Consensus 684 y~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~-- 758 (872)
|+.+|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 104 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 180 (298)
T 3pls_A 104 YMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180 (298)
T ss_dssp CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred cccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence 9999999999975 347888999999999999999999 99999999999999999999999999986542211
Q ss_pred ----CCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002875 759 ----GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 834 (872)
Q Consensus 759 ----~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (872)
.....+...|.+||...+..++.++||||+||++|||+||+.|++......... . ..........+. .
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~--~---~~~~~~~~~~~~---~ 252 (298)
T 3pls_A 181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT--H---FLAQGRRLPQPE---Y 252 (298)
T ss_dssp CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH--H---HHHTTCCCCCCT---T
T ss_pred ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH--H---HhhcCCCCCCCc---c
Confidence 111224455778888888888999999999999999999888876543322110 1 011111011111 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 835 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 835 ~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
....+.+++.+||+.||++|||++|+++.|+.+
T Consensus 253 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 253 CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 224577899999999999999999999999865
No 177
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.9e-37 Score=327.60 Aligned_cols=248 Identities=20% Similarity=0.231 Sum_probs=191.4
Q ss_pred cchhhhccCCCCCceeeeecCC----CcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEe-cCCeeEEEE
Q 002875 610 STECEEAARPQSAAGCKAVLPT----GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCY-NRHQAYLLY 682 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~~~----g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~-~~~~~~lv~ 682 (872)
+...+.||+|+||.||+|+..+ +..||||.+.... ...+.+.+|+.++++++|||||+++++|. .++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 4478899999999999998532 3468999987532 34567889999999999999999999975 456789999
Q ss_pred cccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC
Q 002875 683 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 759 (872)
Q Consensus 683 ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~ 759 (872)
||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 107 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp ECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred eCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 99999999999975 357888999999999999999999 999999999999999999999999999875432211
Q ss_pred ------CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002875 760 ------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 833 (872)
Q Consensus 760 ------~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (872)
....++..|.+||...+..++.++||||+||++|||+||+.|++.......... ..........+..
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-- 256 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-----YLLQGRRLLQPEY-- 256 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH-----HHHTTCCCCCCTT--
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH-----HHhcCCCCCCCcc--
Confidence 111233457788888888889999999999999999997776654433221110 1111110111111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 834 DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 834 ~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
....+.+++.+||+.||++|||++|+++.|+++.
T Consensus 257 -~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 257 -CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp -CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1245778999999999999999999999998763
No 178
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.6e-36 Score=333.59 Aligned_cols=252 Identities=20% Similarity=0.237 Sum_probs=189.1
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc---chhHHHHHHHHHHhhccCCCCceeEEEEEecCC-----
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 676 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----- 676 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++++++|||||++++++...+
T Consensus 25 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 25 KRYQ--NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhee--EeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 4455 889999999999999985 57899999999753 233566789999999999999999999997654
Q ss_pred -eeEEEEcccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccc
Q 002875 677 -QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 755 (872)
Q Consensus 677 -~~~lv~ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~ 755 (872)
..|+||||++ |+|.+.+....++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred cceEEEEEcCC-CCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 7899999997 589999988889999999999999999999999 99999999999999999999999999987653
Q ss_pred ccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc-ccccc---------------
Q 002875 756 LADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGLLG--------------- 818 (872)
Q Consensus 756 ~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~-~~~~~--------------- 818 (872)
.... ....++..|.+||...+..++.++||||+||++|||+||+.||.+......+.. .....
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 3221 122355668888988888889999999999999999999999875432110000 00000
Q ss_pred ---------------ccccccccCC-CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 819 ---------------EMYNENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 819 ---------------~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
........+. .........++.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000000 01112335678899999999999999999999875
No 179
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7e-37 Score=356.76 Aligned_cols=240 Identities=15% Similarity=0.169 Sum_probs=189.0
Q ss_pred hccCCCCCceeeeec---CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCC
Q 002875 615 EAARPQSAAGCKAVL---PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 689 (872)
Q Consensus 615 ~~g~g~~~~v~~~~~---~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~ 689 (872)
.||+|+||.||+|.. .++..||||+++... ...+.+.+|+++|++++|||||+++++|.+ +..|+|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 699999999999975 356789999997642 346788999999999999999999999986 56899999999999
Q ss_pred hHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCC-----
Q 002875 690 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF----- 761 (872)
Q Consensus 690 L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~----- 761 (872)
|.+++.. ..++.+...++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 9999964 357899999999999999999999 99999999999999999999999999997653222111
Q ss_pred cccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002875 762 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 840 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (872)
......|.+||+.....++.++|||||||++|||+| |+.||....... ... .+........++ ....++.
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~~---~i~~~~~~~~p~---~~~~~l~ 569 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMA---FIEQGKRMECPP---ECPPELY 569 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH---HHH---HHHTTCCCCCCT---TCCHHHH
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHH---HHHcCCCCCCCC---cCCHHHH
Confidence 112234778888888889999999999999999998 888886533211 001 111111011111 2235677
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 841 DVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 841 ~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
+++..||+.||++||+++++++.|+.+
T Consensus 570 ~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 570 ALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 899999999999999999999998764
No 180
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.8e-37 Score=340.23 Aligned_cols=255 Identities=22% Similarity=0.288 Sum_probs=184.7
Q ss_pred hHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc---chhHHHHHHHHHHhhccC-CCCceeEEEEEecCC-
Q 002875 603 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRH- 676 (872)
Q Consensus 603 ~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~- 676 (872)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.+++++. |||||++++++..++
T Consensus 6 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 6 HVLRKYE--LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHTTEE--EEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred cccCceE--EEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 3455666 889999999999999985 67999999998642 234556778999999997 999999999997544
Q ss_pred -eeEEEEcccCCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccc
Q 002875 677 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 754 (872)
Q Consensus 677 -~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~ 754 (872)
..|+|||||+ |+|.++++. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred CEEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 7899999998 699999875 467888899999999999999999 9999999999999999999999999999754
Q ss_pred cccC-----------------------CCCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCC
Q 002875 755 QLAD-----------------------GSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 810 (872)
Q Consensus 755 ~~~~-----------------------~~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~ 810 (872)
.... .....++.+|.+||+..+ ..++.++||||+||++|||+||+.||.+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 2210 011235677888998765 6788999999999999999999999875432110
Q ss_pred ccc-ccccc--------ccccc---------------cccCCCCchH-------------HHHHHHHHHHHHcccCCCCC
Q 002875 811 KPI-DGLLG--------EMYNE---------------NEVGSSSSLQ-------------DEIKLVLDVALLCTRSTPSD 853 (872)
Q Consensus 811 ~~~-~~~~~--------~~~~~---------------~~~~~~~~~~-------------~~~~~~~~l~~~cl~~dp~~ 853 (872)
... ..... ....+ .......... ....++.+++.+||+.||++
T Consensus 240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~ 319 (388)
T 3oz6_A 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319 (388)
T ss_dssp HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence 000 00000 00000 0000000000 12346889999999999999
Q ss_pred CCCHHHHHHH
Q 002875 854 RPSMEEALKL 863 (872)
Q Consensus 854 Rpt~~~v~~~ 863 (872)
|||++|++++
T Consensus 320 R~t~~e~l~H 329 (388)
T 3oz6_A 320 RISANDALKH 329 (388)
T ss_dssp SCCHHHHTTS
T ss_pred CCCHHHHhCC
Confidence 9999999987
No 181
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3e-37 Score=337.48 Aligned_cols=237 Identities=16% Similarity=0.101 Sum_probs=182.2
Q ss_pred hcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch----hHHHHHHHHHH-hhccCCCCceeEEEEEecCCeeEE
Q 002875 607 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~----~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~l 680 (872)
.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|..+ ++.++|||||++++++.+.+..|+
T Consensus 39 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 39 DFH--FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GEE--EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred heE--EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 355 889999999999999986 5688999999975432 23344555555 577899999999999999999999
Q ss_pred EEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC
Q 002875 681 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 758 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~ 758 (872)
||||+++|+|.+++.+ ..++.+...++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999999975 457788889999999999999999 99999999999999999999999999987532221
Q ss_pred --CCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 759 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 759 --~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
.....++..|.+||+..+..++.++||||+||++|||+||..||...... .....+.... ...++. ..
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~~~~---~~ 263 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA------EMYDNILNKP-LQLKPN---IT 263 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH------HHHHHHHHSC-CCCCSS---SC
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHhcc-cCCCCC---CC
Confidence 22233667788999988888999999999999999999999999753311 1111111111 111111 22
Q ss_pred HHHHHHHHHcccCCCCCCCCHH
Q 002875 837 KLVLDVALLCTRSTPSDRPSME 858 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt~~ 858 (872)
..+.+++.+||+.||++||++.
T Consensus 264 ~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 264 NSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSTTTT
T ss_pred HHHHHHHHHHcccCHHhCCCCC
Confidence 4577889999999999999974
No 182
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-37 Score=336.61 Aligned_cols=255 Identities=20% Similarity=0.241 Sum_probs=196.0
Q ss_pred cchhhhccCCCCCceeeee-----cCCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEe--cCCeeEEE
Q 002875 610 STECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCY--NRHQAYLL 681 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~-----~~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~~lv 681 (872)
|...+.||+|+||.||+|. ..+|+.||||++.... ...+.+.+|++++++++||||+++++++. +.+..++|
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 104 (327)
T 3lxl_A 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 104 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred hhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence 3488999999999999998 3578999999997543 34567899999999999999999999987 45678999
Q ss_pred EcccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC
Q 002875 682 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 758 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~ 758 (872)
|||+++|+|.+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 105 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred EeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 999999999999865 368999999999999999999999 99999999999999999999999999987643222
Q ss_pred C-----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCC--------Cccccccccccccccc
Q 002875 759 G-----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ--------NKPIDGLLGEMYNENE 825 (872)
Q Consensus 759 ~-----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~--------~~~~~~~~~~~~~~~~ 825 (872)
. ....++.+|.+||...+..++.++||||+||++|||+||+.||....... .........+......
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ 261 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC
T ss_pred ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc
Confidence 1 11224445788888887788899999999999999999999876322100 0000000000000000
Q ss_pred cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 826 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 826 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
. .+........+.+++.+||+.||++|||++|++++|+.+..
T Consensus 262 ~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 262 R--LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred C--CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 01111223567889999999999999999999999987743
No 183
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.6e-37 Score=348.47 Aligned_cols=242 Identities=13% Similarity=0.107 Sum_probs=193.1
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++.+.+..|+||||++
T Consensus 189 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~ 268 (543)
T 3c4z_A 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMN 268 (543)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEecc
Confidence 778899999999999986 579999999997532 234567889999999999999999999999999999999999
Q ss_pred CCChHHHhhC------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC
Q 002875 687 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 760 (872)
Q Consensus 687 ~g~L~~~l~~------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~ 760 (872)
+|+|.+++.. ..++.....++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 269 gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 269 GGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp TCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 9999999865 357788889999999999999999 9999999999999999999999999999765433221
Q ss_pred --CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002875 761 --FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 761 --~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
...++..|.+||+..+..++.++||||+||++|||+||+.||........ .......+.... ...++ .....
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~i~~~~-~~~p~---~~s~~ 419 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRVLEQA-VTYPD---KFSPA 419 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHHHHHCC-CCCCT---TSCHH
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHHHhhcc-cCCCc---ccCHH
Confidence 22466778899998888899999999999999999999999975432111 011111111111 11111 22346
Q ss_pred HHHHHHHcccCCCCCCCCH-----HHHHH
Q 002875 839 VLDVALLCTRSTPSDRPSM-----EEALK 862 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~-----~~v~~ 862 (872)
+.+++.+||+.||++||++ +|+.+
T Consensus 420 ~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 420 SKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred HHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 7789999999999999975 66654
No 184
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.4e-37 Score=337.22 Aligned_cols=249 Identities=16% Similarity=0.169 Sum_probs=193.3
Q ss_pred chhhhccCCCCCceeeeec-CCCcEEEEEEeecc--chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 611 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
...+.||+|+||.||+|.. .+|+.||+|++... ....+.+.+|+.++++++|||||++++++.+++..++||||+++
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 115 (360)
T 3eqc_A 36 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 115 (360)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred eeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCC
Confidence 3888999999999999986 47999999999754 23356788999999999999999999999999999999999999
Q ss_pred CChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCCcccc
Q 002875 688 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI 765 (872)
Q Consensus 688 g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~~~~~ 765 (872)
|+|.+++.. ..++.....++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++...........++
T Consensus 116 ~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt 193 (360)
T 3eqc_A 116 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 193 (360)
T ss_dssp CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCC
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCC
Confidence 999999975 4678888999999999999999832 799999999999999999999999999865433333333455
Q ss_pred cccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc-------------------------------
Q 002875 766 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------------------------- 814 (872)
Q Consensus 766 ~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~------------------------------- 814 (872)
..|.+||...+..++.++||||+||++|||+||+.||............
T Consensus 194 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (360)
T 3eqc_A 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRP 273 (360)
T ss_dssp CTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------
T ss_pred CCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCC
Confidence 6688899988888899999999999999999999998743211000000
Q ss_pred -----ccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 815 -----GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 815 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
............... ......++.+++.+||+.||++|||++|++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 274 PMAIFELLDYIVNEPPPKLP--SGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp CCCHHHHHHHHHHSCCCCCC--TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccchhhhhHHhccCCCCCC--cccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000000000000000 01123467899999999999999999999864
No 185
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.3e-37 Score=351.97 Aligned_cols=248 Identities=17% Similarity=0.201 Sum_probs=196.8
Q ss_pred HHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc----chhHHHHHHHHHHhhccCCCCceeEEEEEecCCee
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 678 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 678 (872)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++++++|||||+++++|.+.+..
T Consensus 24 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 101 (484)
T 3nyv_A 24 FSDRYK--GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF 101 (484)
T ss_dssp HHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred ccCceE--EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 445566 889999999999999986 48999999999653 23467788999999999999999999999999999
Q ss_pred EEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee---CCCCCeeEcccccccc
Q 002875 679 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYL 753 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill---~~~~~~ki~dfg~~~~ 753 (872)
|+|||||++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 102 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 102 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp EEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 999999999999999865 457888899999999999999999 99999999999999 4678999999999876
Q ss_pred ccccCCC-CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002875 754 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 832 (872)
Q Consensus 754 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (872)
....... ...++.+|.+||...+ .++.++||||+||++|||+||..||....... ....+.........+.+
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~ 251 (484)
T 3nyv_A 179 FEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD------ILKKVEKGKYTFELPQW 251 (484)
T ss_dssp BCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCSGGG
T ss_pred cccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCCCCCCCccc
Confidence 5432211 1235667888898765 58889999999999999999999987543211 11111111101111222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 833 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 833 ~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
......+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 252 KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 3334567899999999999999999999864
No 186
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.8e-37 Score=338.97 Aligned_cols=250 Identities=12% Similarity=0.062 Sum_probs=188.7
Q ss_pred hcCcchhhhccCCCCCceeeeecCC------CcEEEEEEeeccchh------------HHHHHHHHHHhhccCCCCceeE
Q 002875 607 SFNSTECEEAARPQSAAGCKAVLPT------GITVSVKKIEWGATR------------IKIVSEFITRIGTVRHKNLIRL 668 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~~~------g~~vavK~~~~~~~~------------~~~~~~e~~~l~~l~H~niv~l 668 (872)
.|. ..+.||+|+||.||+|...+ ++.||||++...... ...+.+|+..++.++|||||++
T Consensus 36 ~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 36 AWK--VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp EEE--EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred eEE--EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 455 88999999999999998644 578999998754321 1123445667788899999999
Q ss_pred EEEEecC----CeeEEEEcccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeC--C
Q 002875 669 LGFCYNR----HQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--E 739 (872)
Q Consensus 669 ~~~~~~~----~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~--~ 739 (872)
++++... ...|+||||| +|+|.+++.. ..++.++..|+.|++.||+|||+. +|+||||||+||+++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCC
Confidence 9999764 4589999999 9999999965 368999999999999999999999 999999999999999 8
Q ss_pred CCCeeEccccccccccccCC---------CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCC
Q 002875 740 NMEPHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 810 (872)
Q Consensus 740 ~~~~ki~dfg~~~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~ 810 (872)
++.+||+|||+++....... ....++..|++||...+..++.++|||||||++|||+||+.||.+......
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 89999999999975432211 111255668888988888899999999999999999999999874322111
Q ss_pred cccc------ccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 811 KPID------GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 811 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
.... .......+.... . .....++.+++..||+.||++||+++++++.|+.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKCFP--A---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHHSC--T---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHhcc--c---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 1000 000000000000 0 01134677899999999999999999999998754
No 187
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=329.89 Aligned_cols=249 Identities=20% Similarity=0.241 Sum_probs=189.3
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch---hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
..+.+|+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCC
Confidence 788999999999999986 5699999999865332 256678899999999999999999999999999999999999
Q ss_pred CChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--CCcc
Q 002875 688 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPA 763 (872)
Q Consensus 688 g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--~~~~ 763 (872)
|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........ ....
T Consensus 87 ~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 163 (311)
T 4agu_A 87 TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV 163 (311)
T ss_dssp EHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----------
T ss_pred chHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCc
Confidence 999998865 357888999999999999999999 999999999999999999999999999876542221 1223
Q ss_pred cccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc-ccccc-------------ccccccccCC
Q 002875 764 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGLLG-------------EMYNENEVGS 828 (872)
Q Consensus 764 ~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~ 828 (872)
++.+|.+||...+ ..++.++||||+||++|||+||+.||........... ..... ........+.
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (311)
T 4agu_A 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD 243 (311)
T ss_dssp --GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCC
T ss_pred CCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCC
Confidence 5566788887754 5678999999999999999999999875432110000 00000 0000000000
Q ss_pred C---Cc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 829 S---SS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 829 ~---~~----~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
. .. .+.....+.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 244 PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 00 01233467899999999999999999999865
No 188
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.3e-37 Score=331.24 Aligned_cols=245 Identities=22% Similarity=0.288 Sum_probs=191.2
Q ss_pred hhhhccCCCCCceeeeec-CCCcE--EEEEEeecc--chhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGIT--VSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~--vavK~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+.||+|+||.||+|.. .+|.. ||||.++.. ....+.+.+|+++++++ +||||+++++++.+.+..|+||||+
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 108 (327)
T 1fvr_A 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 108 (327)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecC
Confidence 788999999999999986 45664 499998753 23456788999999999 8999999999999999999999999
Q ss_pred CCCChHHHhhCC------------------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcc
Q 002875 686 PNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 747 (872)
Q Consensus 686 ~~g~L~~~l~~~------------------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~d 747 (872)
++|+|.+++... .++.+.+.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kL~D 185 (327)
T 1fvr_A 109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 185 (327)
T ss_dssp TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECC
T ss_pred CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEEEcc
Confidence 999999999753 57888899999999999999999 999999999999999999999999
Q ss_pred ccccccccccCCCC-cccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccc
Q 002875 748 FGFKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENE 825 (872)
Q Consensus 748 fg~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 825 (872)
||+++......... ..+...|.+||......++.++||||+||++|||+| |+.||....... ....+.....
T Consensus 186 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~~~~~~~~~ 259 (327)
T 1fvr_A 186 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYEKLPQGYR 259 (327)
T ss_dssp TTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHGGGTCC
T ss_pred cCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH------HHHHhhcCCC
Confidence 99986433222111 123345778888877778899999999999999999 888886433111 0111111100
Q ss_pred cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 826 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 826 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
...+. .....+.+++.+||+.||++|||++|++++|+.+.
T Consensus 260 ~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 260 LEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp CCCCT---TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111 12346778999999999999999999999998663
No 189
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-36 Score=329.83 Aligned_cols=244 Identities=19% Similarity=0.263 Sum_probs=188.6
Q ss_pred hhhhccCCCCCceeeeecCC-----CcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcc
Q 002875 612 ECEEAARPQSAAGCKAVLPT-----GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 684 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~-----g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 684 (872)
..+.||+|+||.||+|.... +..||||.+.... .....+.+|+.++++++|||||++++++.+.+..++||||
T Consensus 48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 66889999999999998532 3469999997542 3355788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCC
Q 002875 685 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 761 (872)
Q Consensus 685 ~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~ 761 (872)
+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 128 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 204 (333)
T 1mqb_A 128 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204 (333)
T ss_dssp CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccccccc
Confidence 999999999975 358889999999999999999999 99999999999999999999999999987643321111
Q ss_pred -----cccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002875 762 -----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 835 (872)
Q Consensus 762 -----~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (872)
..++..|.+||......++.++|||||||++|||+| |+.||....... ....+......+... ..
T Consensus 205 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~~~~~~~~~~~~~~---~~ 275 (333)
T 1mqb_A 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE------VMKAINDGFRLPTPM---DC 275 (333)
T ss_dssp ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTCCCCCCT---TC
T ss_pred cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHHCCCcCCCcc---cC
Confidence 112335778888887888999999999999999999 888886432110 111111111011111 22
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 836 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 836 ~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
...+.+++.+||+.||++||+++|++++|+.+
T Consensus 276 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 276 PSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp BHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 34577899999999999999999999999765
No 190
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.9e-37 Score=351.12 Aligned_cols=248 Identities=17% Similarity=0.202 Sum_probs=193.0
Q ss_pred HHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--------------hhHHHHHHHHHHhhccCCCCceeE
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--------------TRIKIVSEFITRIGTVRHKNLIRL 668 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--------------~~~~~~~~e~~~l~~l~H~niv~l 668 (872)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++
T Consensus 34 i~~~Y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~ 111 (504)
T 3q5i_A 34 IGESYF--KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111 (504)
T ss_dssp GGGTEE--EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred cccceE--EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 344555 889999999999999986 568899999997532 224678899999999999999999
Q ss_pred EEEEecCCeeEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC---Ce
Q 002875 669 LGFCYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EP 743 (872)
Q Consensus 669 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~---~~ 743 (872)
+++|.+.+..|+|||||++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++ .+
T Consensus 112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 112 FDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 9999999999999999999999998864 568899999999999999999999 999999999999998775 69
Q ss_pred eEccccccccccccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccc
Q 002875 744 HLAEFGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 822 (872)
Q Consensus 744 ki~dfg~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 822 (872)
||+|||+++....... ....++.+|.+||+... .++.++||||+||++|||+||..||.+..... ....+..
T Consensus 189 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~ 261 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD------IIKKVEK 261 (504)
T ss_dssp EECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH
T ss_pred EEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHc
Confidence 9999999976543322 22235667888898764 58889999999999999999999987543211 1111111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 823 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.......+.+.....++.+++.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 GKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11000011112234568899999999999999999999864
No 191
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.7e-36 Score=322.03 Aligned_cols=241 Identities=19% Similarity=0.200 Sum_probs=188.0
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEec----CCeeEEEEc
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYD 683 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~e 683 (872)
..+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|+.++++++|||||++++++.. ....++|||
T Consensus 30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence 667899999999999985 678899999997532 345678899999999999999999999875 356899999
Q ss_pred ccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCC--cccCCCCCCCeeeC-CCCCeeEccccccccccccC
Q 002875 684 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLAD 758 (872)
Q Consensus 684 y~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~--i~Hrdlk~~Nill~-~~~~~ki~dfg~~~~~~~~~ 758 (872)
|+++|+|.+++.. ..++.....++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||++.......
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 186 (290)
T 1t4h_A 110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred ecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc
Confidence 9999999999975 568888999999999999999998 6 99999999999998 78999999999986543332
Q ss_pred CCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002875 759 GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 759 ~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
.....+...|.+||.... .++.++||||+||++|||+||+.||......... .......... .........+
T Consensus 187 ~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~ 258 (290)
T 1t4h_A 187 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI-----YRRVTSGVKP--ASFDKVAIPE 258 (290)
T ss_dssp BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH-----HHHHTTTCCC--GGGGGCCCHH
T ss_pred cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH-----HHHHhccCCc--cccCCCCCHH
Confidence 222234556778887764 5888999999999999999999998753321110 0001000000 0001111245
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 839 VLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+.+++.+||+.||++|||++|++++
T Consensus 259 l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 259 VKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHccCChhhCCCHHHHhhC
Confidence 7889999999999999999999875
No 192
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.2e-36 Score=322.10 Aligned_cols=239 Identities=15% Similarity=0.176 Sum_probs=192.9
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.+|+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 18 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 889999999999999986 468899999996532 124678899999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCCccc
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 764 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~~~~ 764 (872)
+|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++............+
T Consensus 98 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 174 (284)
T 2vgo_A 98 RGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCG 174 (284)
T ss_dssp TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCS
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcccccccccC
Confidence 9999999875 467888999999999999999999 99999999999999999999999999986544322223335
Q ss_pred ccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002875 765 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 844 (872)
Q Consensus 765 ~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 844 (872)
...|.+||...+..++.++||||+||++|||+||+.||....... ....+.... ...++. ....+.+++.
T Consensus 175 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~~---~~~~~~~li~ 244 (284)
T 2vgo_A 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------THRRIVNVD-LKFPPF---LSDGSKDLIS 244 (284)
T ss_dssp CGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC-CCCCTT---SCHHHHHHHH
T ss_pred CCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HHHHHhccc-cCCCCc---CCHHHHHHHH
Confidence 566788898888888899999999999999999999986432111 001111111 111111 2245778999
Q ss_pred HcccCCCCCCCCHHHHHHH
Q 002875 845 LCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 845 ~cl~~dp~~Rpt~~~v~~~ 863 (872)
+||+.||++|||++|++++
T Consensus 245 ~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 245 KLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp HHSCSSGGGSCCHHHHHTC
T ss_pred HHhhcCHhhCCCHHHHhhC
Confidence 9999999999999999864
No 193
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-36 Score=322.84 Aligned_cols=243 Identities=15% Similarity=0.165 Sum_probs=191.1
Q ss_pred hhh-hccCCCCCceeeeec---CCCcEEEEEEeecc--chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECE-EAARPQSAAGCKAVL---PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~-~~g~g~~~~v~~~~~---~~g~~vavK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+ .||+|+||.||+|+. .+|+.||||+++.. ....+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 13 i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~ 91 (287)
T 1u59_A 13 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMA 91 (287)
T ss_dssp EEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECC
T ss_pred hhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEEEEeC
Confidence 444 899999999999974 36889999999763 234667889999999999999999999994 45689999999
Q ss_pred CCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC---
Q 002875 686 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 759 (872)
Q Consensus 686 ~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--- 759 (872)
++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 92 GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp TTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 99999999964 358899999999999999999999 999999999999999999999999999876532221
Q ss_pred --CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 760 --SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 760 --~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
....++..|.+||......++.++||||+||++|||+| |+.||....... ... .+........++ ...
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~---~i~~~~~~~~~~---~~~ 239 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMA---FIEQGKRMECPP---ECP 239 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HHH---HHHTTCCCCCCT---TCC
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH---HHH---HHhcCCcCCCCC---CcC
Confidence 11112345778888877778899999999999999999 888886433211 000 110110011111 223
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 837 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
..+.+++..||+.||++||+++|++++|+.+
T Consensus 240 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 240 PELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 4677899999999999999999999999865
No 194
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.6e-37 Score=358.30 Aligned_cols=241 Identities=17% Similarity=0.196 Sum_probs=189.4
Q ss_pred hhccCCCCCceeeeec---CCCcEEEEEEeeccch---hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 614 EEAARPQSAAGCKAVL---PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 614 ~~~g~g~~~~v~~~~~---~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|+++|++++|||||+++++|.+ +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999964 4578999999975432 35788999999999999999999999975 458899999999
Q ss_pred CChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC-----
Q 002875 688 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----- 760 (872)
Q Consensus 688 g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~----- 760 (872)
|+|.++++. ..++.+...|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 999999975 357889999999999999999999 9999999999999999999999999999765332211
Q ss_pred CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002875 761 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 839 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (872)
...++..|.+||+.....++.++|||||||++|||+| |+.||.+..... ....+..... ...+. ....++
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~~~i~~~~~---~~~p~---~~~~~l 601 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTAMLEKGER---MGCPA---GCPREM 601 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHHHHTTCC---CCCCT---TCCHHH
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCCC---CCCCC---CCCHHH
Confidence 1112344778898888889999999999999999999 888886433211 0011111100 11111 223567
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 840 LDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 840 ~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
.+++..||+.||++|||++++++.|+.+
T Consensus 602 ~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 602 YDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 7899999999999999999999999865
No 195
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.6e-37 Score=329.19 Aligned_cols=246 Identities=21% Similarity=0.217 Sum_probs=192.6
Q ss_pred hhhhccCCCCCceeeeec------CCCcEEEEEEeeccch--hHHHHHHHHHHhhcc-CCCCceeEEEEEecCC-eeEEE
Q 002875 612 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH-QAYLL 681 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~------~~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~-~~~lv 681 (872)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.+++++ +||||++++++|...+ ..++|
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 788999999999999973 5678999999975432 355788999999999 7999999999998754 58999
Q ss_pred EcccCCCChHHHhhCC------------------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCe
Q 002875 682 YDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 743 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~~------------------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ 743 (872)
|||+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~ 187 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVV 187 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCE
Confidence 9999999999999763 46788899999999999999999 99999999999999999999
Q ss_pred eEccccccccccccCCC----CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcccccccc
Q 002875 744 HLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLG 818 (872)
Q Consensus 744 ki~dfg~~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 818 (872)
||+|||+++........ ...++..|.+||......++.++||||+||++|||+| |..||........ . . .
T Consensus 188 kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~-~---~ 262 (316)
T 2xir_A 188 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-F-C---R 262 (316)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-H-H---H
T ss_pred EECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH-H-H---H
Confidence 99999998754332211 1123445788898888888999999999999999999 7777764332110 0 0 0
Q ss_pred ccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 819 EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
.+........+. .....+.+++.+||+.||++|||++|++++|+.+.
T Consensus 263 ~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 263 RLKEGTRMRAPD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp HHHHTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCccCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 010100011111 12245778899999999999999999999998763
No 196
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-36 Score=345.15 Aligned_cols=187 Identities=17% Similarity=0.260 Sum_probs=147.8
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc---chhHHHHHHHHHHhhccCCCCceeEEEEEecC-----C
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----H 676 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~ 676 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||+++++|... +
T Consensus 53 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 53 DRYE--IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TTEE--ECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCeE--EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 3455 889999999999999985 57999999999653 23456788999999999999999999999543 5
Q ss_pred eeEEEEcccCCCChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccc
Q 002875 677 QAYLLYDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 754 (872)
Q Consensus 677 ~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~ 754 (872)
..|+||||+. |+|.++++.. .++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred eEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 7899999985 7999999864 57888999999999999999999 9999999999999999999999999999764
Q ss_pred cccCC-----------------------------CCcccccccCchhhh-cccCCcccccchhHHHHHHHHHcC
Q 002875 755 QLADG-----------------------------SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTN 798 (872)
Q Consensus 755 ~~~~~-----------------------------~~~~~~~~~~~~e~~-~~~~~~~~~Dv~S~Gvil~el~tg 798 (872)
..... ....++.+|.+||++ ....++.++||||+||++|||+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 32110 111246778889965 566789999999999999999994
No 197
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.2e-37 Score=327.29 Aligned_cols=252 Identities=13% Similarity=0.077 Sum_probs=190.9
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch----hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 680 (872)
+.|. ..+.+|+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.++++++||||+++++++.+++..|+
T Consensus 34 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 34 GPYR--LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp CCEE--EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred ccEE--EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 4455 889999999999999986 4789999999975422 24678899999999999999999999999999999
Q ss_pred EEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC
Q 002875 681 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 758 (872)
Q Consensus 681 v~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~ 758 (872)
||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 9999999999999975 468889999999999999999999 99999999999999999999999999986543321
Q ss_pred C---CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002875 759 G---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 835 (872)
Q Consensus 759 ~---~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (872)
. ....+...|.+||......++.++|||||||++|||+||+.||...... ............. .......
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~----~~~~~~~ 261 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---VMGAHINQAIPRP----STVRPGI 261 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---HHHHHHHSCCCCG----GGTSTTC
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---HHHHHhccCCCCc----cccCCCC
Confidence 1 1122445678888887778889999999999999999999998743211 0000000000000 0001112
Q ss_pred HHHHHHHHHHcccCCCCCCC-CHHHHHHHHcccCC
Q 002875 836 IKLVLDVALLCTRSTPSDRP-SMEEALKLLSGLKP 869 (872)
Q Consensus 836 ~~~~~~l~~~cl~~dp~~Rp-t~~~v~~~L~~~~~ 869 (872)
..++.+++.+||+.||++|| +++++++.|+....
T Consensus 262 ~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 262 PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 24577889999999999999 99999999986643
No 198
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.5e-36 Score=320.76 Aligned_cols=244 Identities=17% Similarity=0.170 Sum_probs=189.9
Q ss_pred hhhhccCCCCCceeeeecC----CCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~----~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+.+|+|+||.||+|+.. ++..||||.+.... ...+.+.+|+.++++++||||+++++++.+ +..++||||+
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecC
Confidence 7889999999999999853 34569999997542 346678899999999999999999999865 4568999999
Q ss_pred CCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC---
Q 002875 686 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 759 (872)
Q Consensus 686 ~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--- 759 (872)
++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 95 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 171 (281)
T 3cc6_A 95 PYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171 (281)
T ss_dssp TTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--------
T ss_pred CCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccccccccc
Confidence 99999999964 368888999999999999999999 999999999999999999999999999875433221
Q ss_pred CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002875 760 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 760 ~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
....+...|.+||......++.++|||||||++|||+| |+.||........ ...+........+. .....
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~ 242 (281)
T 3cc6_A 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV------IGVLEKGDRLPKPD---LCPPV 242 (281)
T ss_dssp -CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH------HHHHHHTCCCCCCT---TCCHH
T ss_pred ccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH------HHHHhcCCCCCCCC---CCCHH
Confidence 11123345778888887788999999999999999999 8888864332110 00110000011111 12245
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 839 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
+.+++.+||+.||++|||++|++++|+.+.
T Consensus 243 l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 778999999999999999999999998753
No 199
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6.8e-37 Score=326.23 Aligned_cols=252 Identities=10% Similarity=0.043 Sum_probs=191.8
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEE-ecCCeeEEEEc
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYD 683 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv~e 683 (872)
+.|. ..+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+.++++++|++++..+++| .+.+..++|||
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 9 NRYR--LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp --CE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CceE--EeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 4455 889999999999999985 7899999998764322 33577889999999998887776666 56678899999
Q ss_pred ccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee---CCCCCeeEcccccccccccc
Q 002875 684 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 684 y~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill---~~~~~~ki~dfg~~~~~~~~ 757 (872)
|+ +|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 99 9999999863 468999999999999999999999 99999999999999 78899999999999765432
Q ss_pred CC---------CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCC
Q 002875 758 DG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 828 (872)
Q Consensus 758 ~~---------~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (872)
.. ....++..|.+||...+..++.++||||+||++|||+||+.||........... ............
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~ 238 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK---YERISEKKMSTP 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH---HHHHHHHHHHSC
T ss_pred ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh---hhhhhcccccch
Confidence 21 122345567888988888889999999999999999999999975432221111 111100000000
Q ss_pred -CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 829 -SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 829 -~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
..........+.+++.+||+.||++|||++|+++.|+.+
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 000011235688999999999999999999999999765
No 200
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.1e-36 Score=325.10 Aligned_cols=245 Identities=19% Similarity=0.253 Sum_probs=183.2
Q ss_pred hhhhccCCCCCceeeeecC----CCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCC-----eeE
Q 002875 612 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAY 679 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~----~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-----~~~ 679 (872)
..+.||+|+||.||+|... +++.||||.+.... ...+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 7888999999999999753 45689999997532 23567889999999999999999999998754 359
Q ss_pred EEEcccCCCChHHHhh--------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccc
Q 002875 680 LLYDYLPNGNLSEKIR--------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 751 (872)
Q Consensus 680 lv~ey~~~g~L~~~l~--------~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~ 751 (872)
+||||+++|+|.+++. ...++.+.+.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecCcc
Confidence 9999999999999983 2357889999999999999999999 9999999999999999999999999998
Q ss_pred ccccccCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcccccccccccccccc
Q 002875 752 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 826 (872)
Q Consensus 752 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (872)
+....... ....+...|.+||......++.++|||||||++|||+| |..||....... ...........
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~~ 268 (313)
T 3brb_A 195 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE------MYDYLLHGHRL 268 (313)
T ss_dssp ----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG------HHHHHHTTCCC
T ss_pred eecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHHcCCCC
Confidence 75432211 11123345778888888888999999999999999999 666665432211 01111111101
Q ss_pred CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 827 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 827 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
..+ ......+.+++.+||+.||++|||++|++++|+.+.
T Consensus 269 ~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 269 KQP---EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp CCB---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC---ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111 122346788999999999999999999999998763
No 201
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3e-36 Score=317.67 Aligned_cols=248 Identities=16% Similarity=0.179 Sum_probs=194.3
Q ss_pred HhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEE
Q 002875 605 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 681 (872)
Q Consensus 605 ~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 681 (872)
.+.|. ..+.+|+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 6 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 6 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ecceE--EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 34565 888999999999999986 479999999997533 3456788999999999999999999999999999999
Q ss_pred EcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC-
Q 002875 682 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD- 758 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~- 758 (872)
|||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 999999999999976 357888999999999999999999 99999999999999999999999999987543211
Q ss_pred ---CCCcccccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002875 759 ---GSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 834 (872)
Q Consensus 759 ---~~~~~~~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (872)
.....+...|.+||......+ +.++||||+||++|||+||+.||......... . ......... ......
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~----~~~~~~~~~--~~~~~~ 233 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-Y----SDWKEKKTY--LNPWKK 233 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH-H----HHHHTTCTT--STTGGG
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH-H----HHhhhcccc--cCchhh
Confidence 111224455778887765544 67899999999999999999998754322110 0 000000000 011112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002875 835 EIKLVLDVALLCTRSTPSDRPSMEEALKLL 864 (872)
Q Consensus 835 ~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L 864 (872)
....+.+++.+||+.||++|||++|++++-
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (276)
T 2yex_A 234 IDSAPLALLHKILVENPSARITIPDIKKDR 263 (276)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred cCHHHHHHHHHHCCCCchhCCCHHHHhcCc
Confidence 234677899999999999999999998753
No 202
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8.3e-37 Score=341.69 Aligned_cols=191 Identities=19% Similarity=0.176 Sum_probs=164.2
Q ss_pred cchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhcc------CCCCceeEEEEEecCCeeEEEE
Q 002875 610 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV------RHKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~~~~~~~~~~~lv~ 682 (872)
|...+.||+|+||.||+|.. .+|+.||||++.......+.+.+|+++++.+ .|+||+++++++...+..++||
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 178 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTF 178 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEE
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEE
Confidence 34889999999999999975 5689999999987655566778888888776 5779999999999999999999
Q ss_pred cccCCCChHHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC--eeEccccccccccc
Q 002875 683 DYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKYLTQL 756 (872)
Q Consensus 683 ey~~~g~L~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~--~ki~dfg~~~~~~~ 756 (872)
||++ |+|.+++... .++.....++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++....
T Consensus 179 e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 179 ELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp CCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred eccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 9996 6999988652 58889999999999999999999 9999999999999999887 99999999865433
Q ss_pred cCCCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCC
Q 002875 757 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 805 (872)
Q Consensus 757 ~~~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~ 805 (872)
... ...++.+|.+||+..+..++.++|||||||++|||+||..||...
T Consensus 255 ~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 255 RVY-TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CCC-SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccc-ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 222 223556688899988888999999999999999999999888754
No 203
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.9e-37 Score=331.22 Aligned_cols=251 Identities=18% Similarity=0.267 Sum_probs=193.1
Q ss_pred hhhhccCCCCCceeeee-----cCCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCC--eeEEEEc
Q 002875 612 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYD 683 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~-----~~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~e 683 (872)
..+.||+|+||.||+|. ..+|+.||||++.... ...+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 78899999999999997 3578999999997543 34567899999999999999999999987654 7899999
Q ss_pred ccCCCChHHHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-
Q 002875 684 YLPNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 759 (872)
Q Consensus 684 y~~~g~L~~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~- 759 (872)
|+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 125 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~ 201 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY 201 (326)
T ss_dssp CCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE
T ss_pred CCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccccccc
Confidence 99999999999753 58889999999999999999999 999999999999999999999999999876533221
Q ss_pred ----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCC---------CCCCccccccccccccc-cc
Q 002875 760 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGS---------SLQNKPIDGLLGEMYNE-NE 825 (872)
Q Consensus 760 ----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~---------~~~~~~~~~~~~~~~~~-~~ 825 (872)
....+...|.+||......++.++||||+||++|||+||..|+.... ..........+.+.... ..
T Consensus 202 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (326)
T 2w1i_A 202 YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 281 (326)
T ss_dssp EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC
Confidence 11123344678888877778899999999999999999988865210 00000000000011110 00
Q ss_pred cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 826 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 826 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
.+.+ .....++.+++.+||+.||++|||++|+++.|+.++
T Consensus 282 ~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 282 LPRP---DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp CCCC---TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC---CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111 122346778999999999999999999999998764
No 204
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.3e-37 Score=331.83 Aligned_cols=247 Identities=16% Similarity=0.186 Sum_probs=193.0
Q ss_pred chhhhccCCCCCceeeeecC-C-----CcEEEEEEeeccc--hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEE
Q 002875 611 TECEEAARPQSAAGCKAVLP-T-----GITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 681 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~-~-----g~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 681 (872)
...+.||+|+||.||+|... + ++.||||.+.... ...+.+.+|+.+++++ +|||||+++++|.+.+..++|
T Consensus 49 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 128 (333)
T 2i1m_A 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI 128 (333)
T ss_dssp EEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEE
Confidence 37789999999999999852 2 3479999997543 3456788999999999 899999999999999999999
Q ss_pred EcccCCCChHHHhhC----------------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeE
Q 002875 682 YDYLPNGNLSEKIRT----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 745 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~----------------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki 745 (872)
|||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 129 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl 205 (333)
T 2i1m_A 129 TEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKI 205 (333)
T ss_dssp EECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEEEB
T ss_pred EecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeEEE
Confidence 999999999999864 247788899999999999999999 9999999999999999999999
Q ss_pred ccccccccccccCCC----CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcccccccccc
Q 002875 746 AEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 820 (872)
Q Consensus 746 ~dfg~~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 820 (872)
+|||+++........ ...++..|.+||......++.++|||||||++|||+| |..||........ ........
T Consensus 206 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~~~~~~~~ 283 (333)
T 2i1m_A 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK--FYKLVKDG 283 (333)
T ss_dssp CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--HHHHHHHT
T ss_pred CccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--HHHHHhcC
Confidence 999999754332211 1123345778888877788999999999999999999 7677754322110 00111111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 821 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
.... .+. .....+.+++.+||+.||++|||++|++++|+.+.
T Consensus 284 ~~~~---~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 284 YQMA---QPA---FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp CCCC---CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC---CCC---CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 1110 011 11245778999999999999999999999998653
No 205
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=328.06 Aligned_cols=251 Identities=17% Similarity=0.205 Sum_probs=191.3
Q ss_pred cchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEe----cCCeeEEEEc
Q 002875 610 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCY----NRHQAYLLYD 683 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~----~~~~~~lv~e 683 (872)
|...+.||+|+||.||++.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++. ..+..++|||
T Consensus 31 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 110 (317)
T 2buj_A 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110 (317)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEE
Confidence 33889999999999999986 789999999986543 34667889999999999999999999997 3457899999
Q ss_pred ccCCCChHHHhhC------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc
Q 002875 684 YLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 684 y~~~g~L~~~l~~------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~ 757 (872)
|+++|+|.+++.. ..++.+.+.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp CCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred eCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 9999999999864 358889999999999999999999 9999999999999999999999999987653211
Q ss_pred CCC-----------CcccccccCchhhhccc---CCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccc
Q 002875 758 DGS-----------FPAKIAWTESGEFYNAM---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 823 (872)
Q Consensus 758 ~~~-----------~~~~~~~~~~~e~~~~~---~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 823 (872)
... ...++..|.+||..... .++.++|||||||++|||+||+.||.......... .........
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~- 265 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV-ALAVQNQLS- 265 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCH-HHHHHCC---
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchh-hHHhhccCC-
Confidence 100 01124557788876543 36788999999999999999999985311100000 000000000
Q ss_pred cccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 824 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
.+.. ......+.+++.+||+.||++|||++|++++|+.+++.
T Consensus 266 --~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 266 --IPQS---PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp --CCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred --CCcc---ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 1111 11234677899999999999999999999999988764
No 206
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.6e-37 Score=333.97 Aligned_cols=249 Identities=12% Similarity=0.043 Sum_probs=186.9
Q ss_pred chhhhccCCCCCceeeeecC----CCcEEEEEEeeccch------------hHHHHHHHHHHhhccCCCCceeEEEEEec
Q 002875 611 TECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGAT------------RIKIVSEFITRIGTVRHKNLIRLLGFCYN 674 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~----~g~~vavK~~~~~~~------------~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 674 (872)
...+.||+|+||.||+|... ++..||||++..... ..+.+.+|+..++.++||||+++++++.+
T Consensus 40 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~ 119 (345)
T 2v62_A 40 VLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLT 119 (345)
T ss_dssp EEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEE
T ss_pred EEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccc
Confidence 38899999999999999974 678999999875421 12335677888999999999999999987
Q ss_pred ----CCeeEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC--CeeEc
Q 002875 675 ----RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM--EPHLA 746 (872)
Q Consensus 675 ----~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~--~~ki~ 746 (872)
.+..|+||||+ +|+|.+++.. ..++.+++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 120 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kL~ 195 (345)
T 2v62_A 120 EFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLA 195 (345)
T ss_dssp ESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSEEEC
T ss_pred ccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcEEEE
Confidence 67899999999 9999999976 468999999999999999999999 999999999999998877 99999
Q ss_pred cccccccccccCC---------CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccc
Q 002875 747 EFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLL 817 (872)
Q Consensus 747 dfg~~~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~ 817 (872)
|||+++....... ....++..|.+||...+..++.++|||||||++|||+||+.||......... .....
T Consensus 196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~-~~~~~ 274 (345)
T 2v62_A 196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA-VQTAK 274 (345)
T ss_dssp CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH-HHHHH
T ss_pred eCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH-HHHHH
Confidence 9999975432211 1123455678889888888899999999999999999999998642211110 00000
Q ss_pred cccccccccCCCCchH------HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 818 GEMYNENEVGSSSSLQ------DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 818 ~~~~~~~~~~~~~~~~------~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
....... +.... ....++.+++.+||+.||++|||++++++.|+.+.
T Consensus 275 ~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 275 TNLLDEL----PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHTT----THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred Hhhcccc----cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 0000000 00000 12346888999999999999999999999998754
No 207
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=328.73 Aligned_cols=246 Identities=17% Similarity=0.225 Sum_probs=186.7
Q ss_pred cchhhhccCCCCCceeeeec-CCCcEE----EEEEeecc--chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEE
Q 002875 610 STECEEAARPQSAAGCKAVL-PTGITV----SVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~-~~g~~v----avK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 682 (872)
|...+.||+|+||.||+|.. .+|+.| |+|.+... ....+.+.+|+.++++++|||||+++++|.+.+ .++||
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~ 95 (327)
T 3lzb_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIT 95 (327)
T ss_dssp EEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEE
T ss_pred ceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEE
Confidence 34889999999999999984 556554 67766432 234677889999999999999999999998765 78999
Q ss_pred cccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC
Q 002875 683 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 759 (872)
Q Consensus 683 ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~ 759 (872)
||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 96 ~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp CCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 99999999999965 357888999999999999999999 999999999999999999999999999976533221
Q ss_pred CC----cccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002875 760 SF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 834 (872)
Q Consensus 760 ~~----~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (872)
.. ..++..|.+||...+..++.++||||+||++|||+| |..||....... ..... ........++ .
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~~---~~~~~~~~~~---~ 243 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSIL---EKGERLPQPP---I 243 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHH---HTTCCCCCCT---T
T ss_pred cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHH---HcCCCCCCCc---c
Confidence 11 112345778888888888999999999999999999 888876432211 00000 0111011111 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 835 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 835 ~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
...++.+++.+||+.||++|||++|+++.|+.+.
T Consensus 244 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 244 CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 2345778999999999999999999999998764
No 208
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=9.3e-37 Score=325.19 Aligned_cols=251 Identities=10% Similarity=0.042 Sum_probs=193.3
Q ss_pred hcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEE-ecCCeeEEEEcc
Q 002875 607 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYDY 684 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv~ey 684 (872)
.|. ..+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+.++++++|++++..++++ .+.+..++||||
T Consensus 10 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 10 RYR--LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred EEE--EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 355 889999999999999995 7899999999875432 34578899999999998877766666 566788999999
Q ss_pred cCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee---CCCCCeeEccccccccccccC
Q 002875 685 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLAD 758 (872)
Q Consensus 685 ~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill---~~~~~~ki~dfg~~~~~~~~~ 758 (872)
+ +|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++......
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (296)
T 3uzp_A 87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred c-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence 9 8999999862 468899999999999999999999 99999999999999 478899999999987654322
Q ss_pred C---------CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccc-cccccccccCC
Q 002875 759 G---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLL-GEMYNENEVGS 828 (872)
Q Consensus 759 ~---------~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 828 (872)
. ....++..|.+||...+..++.++|||||||++|||+||+.||............... ....... .
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~-- 239 (296)
T 3uzp_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-I-- 239 (296)
T ss_dssp TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-H--
T ss_pred cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-h--
Confidence 1 1223555678889888888899999999999999999999998754322111111000 0000000 0
Q ss_pred CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 829 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 829 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
.........++.+++.+||+.||++|||++|+++.|+.+
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence 000011234678899999999999999999999999865
No 209
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3e-36 Score=325.88 Aligned_cols=252 Identities=17% Similarity=0.208 Sum_probs=184.7
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch---hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 681 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 681 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.++++++|||||++++++.+++..++|
T Consensus 34 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 34 DRYR--RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp GGEE--EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhEE--EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 4455 889999999999999984 6899999999975432 244667899999999999999999999999999999
Q ss_pred EcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee-----CCCCCeeEccccccccc
Q 002875 682 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF-----DENMEPHLAEFGFKYLT 754 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill-----~~~~~~ki~dfg~~~~~ 754 (872)
|||++ |+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 112 ~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp EECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred EecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 99998 599999876 357888899999999999999999 99999999999999 45556999999998754
Q ss_pred cccCC--CCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCC---------------cccccc
Q 002875 755 QLADG--SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGL 816 (872)
Q Consensus 755 ~~~~~--~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~---------------~~~~~~ 816 (872)
..... ....++..|.+||...+ ..++.++||||+||++|||+||+.||........ +.....
T Consensus 188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (329)
T 3gbz_A 188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA 267 (329)
T ss_dssp C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhh
Confidence 32221 11224556788888765 4578999999999999999999999875432110 000000
Q ss_pred ccccccccccCCCCchHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 817 LGEMYNENEVGSSSSLQD-----EIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
........+......... ...++.+++.+||+.||++|||++|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp STTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000000000111111 23567899999999999999999999874
No 210
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.6e-37 Score=329.83 Aligned_cols=241 Identities=17% Similarity=0.165 Sum_probs=189.1
Q ss_pred hhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccC-CCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 614 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 614 ~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.++++++ ||||+++++++.+.+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 7899999999999986 579999999997532 23567888999999985 699999999999999999999999999
Q ss_pred ChHHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC---CCCeeEccccccccccccCC-C
Q 002875 689 NLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG-S 760 (872)
Q Consensus 689 ~L~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~---~~~~ki~dfg~~~~~~~~~~-~ 760 (872)
+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++....... .
T Consensus 115 ~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 191 (327)
T 3lm5_A 115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR 191 (327)
T ss_dssp EGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------
T ss_pred cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccc
Confidence 99999854 357889999999999999999999 9999999999999997 78999999999976543221 1
Q ss_pred CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002875 761 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 840 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (872)
...++..|.+||......++.++||||+||++|||+||+.||......... .. ........ ..+........+.
T Consensus 192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~--~~-i~~~~~~~---~~~~~~~~~~~~~ 265 (327)
T 3lm5_A 192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY--LN-ISQVNVDY---SEETFSSVSQLAT 265 (327)
T ss_dssp --CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HH-HHHTCCCC---CTTTTTTSCHHHH
T ss_pred cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH--HH-HHhccccc---CchhhcccCHHHH
Confidence 223556688899988888899999999999999999999998754321100 00 00000000 0111122334677
Q ss_pred HHHHHcccCCCCCCCCHHHHHHH
Q 002875 841 DVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 841 ~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+++.+||+.||++|||++|++++
T Consensus 266 ~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 266 DFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHHcCCChhhCcCHHHHhCC
Confidence 89999999999999999999875
No 211
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=9.7e-37 Score=323.78 Aligned_cols=242 Identities=15% Similarity=0.177 Sum_probs=188.6
Q ss_pred HHhhcCcchhhhccCCCCCceeeeecC-CCcEEEEEEeecc---chhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCee
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG---ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQA 678 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~ 678 (872)
....|. ..+.+|+|+||.||+|... +|+.||||++... ......+.+|+..+.++ +|||||++++++.+++..
T Consensus 9 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 9 YTTEFH--ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred ccchhh--hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 345566 8899999999999999864 8999999999753 23456677889999988 999999999999999999
Q ss_pred EEEEcccCCCChHHHhhC------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC------------
Q 002875 679 YLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN------------ 740 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~------------ 740 (872)
++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccc
Confidence 999999999999999964 358889999999999999999999 99999999999999844
Q ss_pred -------CCeeEccccccccccccCCCCcccccccCchhhhccc-CCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcc
Q 002875 741 -------MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP 812 (872)
Q Consensus 741 -------~~~ki~dfg~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~ 812 (872)
..+||+|||.+....... ...++..|.+||..... .++.++|||||||++|||++|..++......
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~---- 237 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISSPQ--VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW---- 237 (289)
T ss_dssp ------CCCEEECCCTTCEETTCSC--CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH----
T ss_pred ccccCCceEEEEcccccccccCCcc--ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH----
Confidence 479999999987654322 22244557777877554 5667899999999999999988766432210
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002875 813 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 864 (872)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L 864 (872)
..+........++. ....+.+++.+||+.||++|||++|++++-
T Consensus 238 -----~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 238 -----HEIRQGRLPRIPQV---LSQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp -----HHHHTTCCCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred -----HHHHcCCCCCCCcc---cCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 01111110011111 224577899999999999999999998753
No 212
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=332.79 Aligned_cols=237 Identities=10% Similarity=0.055 Sum_probs=186.5
Q ss_pred hhhhccCCCCCceeeee------cCCCcEEEEEEeeccchhHHHHHHHHHHhhccC---CCCceeEEEEEecCCeeEEEE
Q 002875 612 ECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~------~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ 682 (872)
..+.||+|+||.||+|+ ..+|+.||||+++.. ....+.+|++++++++ |+||+++++++..++..|+||
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~ 146 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG 146 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEE
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEE
Confidence 78899999999999994 567899999999754 3445667777777776 999999999999999999999
Q ss_pred cccCCCChHHHhhC-------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC-----------CCCee
Q 002875 683 DYLPNGNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-----------NMEPH 744 (872)
Q Consensus 683 ey~~~g~L~~~l~~-------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~-----------~~~~k 744 (872)
|||++|+|.+++.. ..++.++..|+.|+++||+|||+. +|+||||||+|||++. ++.+|
T Consensus 147 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k 223 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLA 223 (365)
T ss_dssp CCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred eccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccCCEE
Confidence 99999999999962 468899999999999999999998 9999999999999998 89999
Q ss_pred EccccccccccccC----CCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccc
Q 002875 745 LAEFGFKYLTQLAD----GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEM 820 (872)
Q Consensus 745 i~dfg~~~~~~~~~----~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 820 (872)
|+|||+++...... .....++.+|++||+..+..++.++|||||||++|||+||+.||....... +. ....
T Consensus 224 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~----~~~~ 298 (365)
T 3e7e_A 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-CK----PEGL 298 (365)
T ss_dssp ECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-EE----ECSC
T ss_pred EeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-ee----echh
Confidence 99999996543211 112235667889999888889999999999999999999999986432211 00 1111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHccc
Q 002875 821 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR-PSMEEALKLLSGL 867 (872)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R-pt~~~v~~~L~~~ 867 (872)
... .+. ...+.+++..|++.+|.+| |+++++.+.|+.+
T Consensus 299 ~~~-----~~~----~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 299 FRR-----LPH----LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp CTT-----CSS----HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ccc-----cCc----HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 111 111 2235567788999999988 6788877776643
No 213
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-37 Score=335.88 Aligned_cols=247 Identities=15% Similarity=0.113 Sum_probs=190.8
Q ss_pred hcCcchhhhccCCCCCceeeeec----CCCcEEEEEEeeccc-----hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCC
Q 002875 607 SFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH 676 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~----~~g~~vavK~~~~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 676 (872)
.|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+++++++ +||||+++++++.+.+
T Consensus 55 ~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 55 NFE--LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GEE--EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ceE--EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 355 889999999999999986 479999999986432 2345677889999999 6999999999999999
Q ss_pred eeEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccc
Q 002875 677 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 754 (872)
Q Consensus 677 ~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~ 754 (872)
..++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999999999975 467888899999999999999999 9999999999999999999999999998754
Q ss_pred cccCC---CCcccccccCchhhhcc--cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCC
Q 002875 755 QLADG---SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 829 (872)
Q Consensus 755 ~~~~~---~~~~~~~~~~~~e~~~~--~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (872)
..... ....++..|.+||+..+ ..++.++|||||||++|||+||+.||......... ........... ...+
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~-~~~~ 286 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ--AEISRRILKSE-PPYP 286 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH--HHHHHHHHHCC-CCCC
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH--HHHHHHHhccC-CCCC
Confidence 32211 11224566788888764 34678899999999999999999998744322111 01111111111 1111
Q ss_pred CchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 002875 830 SSLQDEIKLVLDVALLCTRSTPSDRP-----SMEEALKLL 864 (872)
Q Consensus 830 ~~~~~~~~~~~~l~~~cl~~dp~~Rp-----t~~~v~~~L 864 (872)
.+....+.+++.+||+.||++|| |++|++++.
T Consensus 287 ---~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 287 ---QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ---cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 12234577899999999999999 999998765
No 214
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.1e-36 Score=329.27 Aligned_cols=245 Identities=16% Similarity=0.174 Sum_probs=188.0
Q ss_pred hhhhccCCCCCceeeeec------CCCcEEEEEEeecc--chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEc
Q 002875 612 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~------~~g~~vavK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 683 (872)
..+.||+|+||.||+|.. .+|+.||||.+... ......+.+|+.++++++||||+++++++.+.+..|+|||
T Consensus 34 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEe
Confidence 889999999999999984 46789999999643 2345678889999999999999999999999999999999
Q ss_pred ccCCCChHHHhhCC---------CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC---CCCeeEcccccc
Q 002875 684 YLPNGNLSEKIRTK---------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFK 751 (872)
Q Consensus 684 y~~~g~L~~~l~~~---------~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~---~~~~ki~dfg~~ 751 (872)
|+++|+|.+++... .++.+.+.++.|+++||+|||+. +|+||||||+||+++. +..+||+|||++
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECccccc
Confidence 99999999999752 57888999999999999999999 9999999999999984 446999999998
Q ss_pred ccccccCC----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcccccccccccccccc
Q 002875 752 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 826 (872)
Q Consensus 752 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (872)
+....... ....+...|.+||......++.++|||||||++|||+| |..||....... ....+......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~ 264 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE------VLEFVTSGGRM 264 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHHTTCCC
T ss_pred cccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH------HHHHHhcCCCC
Confidence 64332211 11123445778888877788999999999999999999 777765432110 00011111001
Q ss_pred CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 827 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 827 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
.... .....+.+++.+||+.||++|||++|++++|+.+.
T Consensus 265 ~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 265 DPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 0111 12245778999999999999999999999998653
No 215
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=333.22 Aligned_cols=248 Identities=17% Similarity=0.222 Sum_probs=183.7
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccchh--HHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR--IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~--~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
..+.||+|+||.||+|.. .+|+.||||++...... ...+.+|++++++++|||||++++++.+++..++||||++ |
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 788999999999999986 47999999999753322 2234578999999999999999999999999999999997 5
Q ss_pred ChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC--Ccc
Q 002875 689 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 763 (872)
Q Consensus 689 ~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~--~~~ 763 (872)
+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 161 (324)
T 3mtl_A 85 DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV 161 (324)
T ss_dssp EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-----------
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccccc
Confidence 99998865 357888999999999999999999 9999999999999999999999999998754322211 122
Q ss_pred cccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc---------cccccccccc------cccC
Q 002875 764 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLGEMYNE------NEVG 827 (872)
Q Consensus 764 ~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~---------~~~~~~~~~~------~~~~ 827 (872)
++.+|.+||...+ ..++.++||||+||++|||+||+.||........... .......... ....
T Consensus 162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (324)
T 3mtl_A 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPK 241 (324)
T ss_dssp -CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCC
T ss_pred CcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccccc
Confidence 4566788887754 5678999999999999999999999875431110000 0000000000 0000
Q ss_pred -CCCc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 828 -SSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 828 -~~~~----~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.... ......++.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 01123467899999999999999999999864
No 216
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.9e-37 Score=323.68 Aligned_cols=247 Identities=17% Similarity=0.197 Sum_probs=192.1
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEe--cCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCY--NRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~~lv~ey~ 685 (872)
..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|+.++++++||||+++++++. ..+..++||||+
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 789999999999999986 579999999997532 34567889999999999999999999885 356899999999
Q ss_pred CCCChHHHhhC------CCCHHHHHHHHHHHHHHHHHHhhCCCCC-----cccCCCCCCCeeeCCCCCeeEccccccccc
Q 002875 686 PNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPA-----IPHGDLKASNIVFDENMEPHLAEFGFKYLT 754 (872)
Q Consensus 686 ~~g~L~~~l~~------~~~~~~~~~i~~~i~~gl~~lH~~~~~~-----i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~ 754 (872)
++|+|.+++.. ..++.+.+.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 99999999864 268899999999999999999998 6 999999999999999999999999998654
Q ss_pred cccCCC--CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002875 755 QLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 832 (872)
Q Consensus 755 ~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (872)
...... ...+...|.+||......++.++|||||||++|||+||+.||....... ....+........+.
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~i~~~~~~~~~~-- 238 (279)
T 2w5a_A 167 NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE------LAGKIREGKFRRIPY-- 238 (279)
T ss_dssp ---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCCT--
T ss_pred ccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH------HHHHHhhcccccCCc--
Confidence 322110 1123455778888887788899999999999999999999886432110 001111111001111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 833 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 833 ~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
....++.+++.+||+.||++|||++|+++++....++
T Consensus 239 -~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 239 -RYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred -ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 1234677899999999999999999999988765543
No 217
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.5e-36 Score=328.91 Aligned_cols=246 Identities=14% Similarity=0.158 Sum_probs=189.7
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccC-CCCceeEEEEEec--CCeeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYN--RHQAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~--~~~~~lv~ey~~~ 687 (872)
..+.||+|+||.||+|.. .+|+.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||||+++
T Consensus 40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 889999999999999984 78999999999743 3567889999999997 9999999999987 5678999999999
Q ss_pred CChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC-CeeEccccccccccccCC-CCcccc
Q 002875 688 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG-SFPAKI 765 (872)
Q Consensus 688 g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~-~~ki~dfg~~~~~~~~~~-~~~~~~ 765 (872)
|+|.++++. .+..+...++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++....... ....+.
T Consensus 118 ~~l~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 193 (330)
T 3nsz_A 118 TDFKQLYQT-LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 193 (330)
T ss_dssp CCHHHHGGG-CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSC
T ss_pred hhHHHHHHh-CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcccccccc
Confidence 999998864 78888999999999999999999 999999999999999776 899999999976543222 222355
Q ss_pred cccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc--c---------c-----------cccccc
Q 002875 766 AWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--G---------L-----------LGEMYN 822 (872)
Q Consensus 766 ~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~--~---------~-----------~~~~~~ 822 (872)
.+|.+||.... ..++.++||||+||++|||+||+.||..+......... . . ......
T Consensus 194 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (330)
T 3nsz_A 194 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILG 273 (330)
T ss_dssp GGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHC
T ss_pred ccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhh
Confidence 56778887765 66889999999999999999999999654321110000 0 0 000000
Q ss_pred c----cc--cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 823 E----NE--VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 823 ~----~~--~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
. .. ............++.+++.+||+.||++|||++|++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 274 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 00 00000011134568899999999999999999999975
No 218
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.5e-37 Score=328.12 Aligned_cols=248 Identities=20% Similarity=0.228 Sum_probs=174.3
Q ss_pred chhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 611 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 18 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (303)
T 2vwi_A 18 ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97 (303)
T ss_dssp EEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTT
T ss_pred hhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccC
Confidence 3889999999999999985 578999999986532 3356678899999999999999999999999999999999999
Q ss_pred CChHHHhhC----------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc
Q 002875 688 GNLSEKIRT----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 688 g~L~~~l~~----------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~ 757 (872)
|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp CBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred CchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 999999863 257889999999999999999999 9999999999999999999999999998654321
Q ss_pred C-------CCCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccccc--ccC
Q 002875 758 D-------GSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN--EVG 827 (872)
Q Consensus 758 ~-------~~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 827 (872)
. .....++..|.+||.... ..++.++||||+||++|||+||+.||......... ........... ...
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~ 252 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL--MLTLQNDPPSLETGVQ 252 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH--HHHHTSSCCCTTC---
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH--HHHhccCCCccccccc
Confidence 1 111124455777887754 56788999999999999999999998754321110 00000000000 000
Q ss_pred CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 828 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 828 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
...........+.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 253 DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp --CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000011122457789999999999999999999874
No 219
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.4e-36 Score=322.68 Aligned_cols=243 Identities=16% Similarity=0.200 Sum_probs=189.0
Q ss_pred hhh-hccCCCCCceeeeec---CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcc
Q 002875 612 ECE-EAARPQSAAGCKAVL---PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 684 (872)
Q Consensus 612 ~~~-~~g~g~~~~v~~~~~---~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 684 (872)
..+ .||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++++++||||+++++++ ..+..++||||
T Consensus 20 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~ 98 (291)
T 1xbb_A 20 LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEM 98 (291)
T ss_dssp EEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred hccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEe
Confidence 555 899999999999953 457899999997542 2356788999999999999999999999 55678999999
Q ss_pred cCCCChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC--
Q 002875 685 LPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 760 (872)
Q Consensus 685 ~~~g~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~-- 760 (872)
+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 99 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (291)
T 1xbb_A 99 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175 (291)
T ss_dssp CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred CCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccc
Confidence 9999999999753 57888999999999999999999 9999999999999999999999999998754332211
Q ss_pred ---CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 761 ---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 761 ---~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
...+...|.+||......++.++|||||||++|||+| |+.||....... ...... .......+ ....
T Consensus 176 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~---~~~~~~~~---~~~~ 246 (291)
T 1xbb_A 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTAMLE---KGERMGCP---AGCP 246 (291)
T ss_dssp C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHHHH---TTCCCCCC---TTCC
T ss_pred ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHH---cCCCCCCC---CCCC
Confidence 1112244678888877778889999999999999999 888876433211 000000 00001111 1223
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 837 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
..+.+++.+||+.||++|||++|+++.|+.+
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 4677899999999999999999999999865
No 220
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-36 Score=331.61 Aligned_cols=251 Identities=20% Similarity=0.264 Sum_probs=186.0
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc---chhHHHHHHHHHHhhccCCCCceeEEEEEecCC-----
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 676 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----- 676 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...+
T Consensus 25 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 25 AVYR--DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp SSEE--EEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ceEE--EeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 3354 888999999999999986 67999999999543 223566789999999999999999999998653
Q ss_pred -eeEEEEcccCCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccc
Q 002875 677 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 754 (872)
Q Consensus 677 -~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~ 754 (872)
..|+||||+ +++|.++++. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 469999999 7899999875 468888899999999999999999 9999999999999999999999999999765
Q ss_pred cccCCCCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc---------ccccc------
Q 002875 755 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLG------ 818 (872)
Q Consensus 755 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~---------~~~~~------ 818 (872)
..... ...++.+|.+||...+ ..++.++||||+||++|||+||+.||.+......... .....
T Consensus 179 ~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~ 257 (367)
T 1cm8_A 179 DSEMT-GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 257 (367)
T ss_dssp CSSCC-SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred ccccC-cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHH
Confidence 43222 2235667888887765 6789999999999999999999999875432110000 00000
Q ss_pred ------ccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 819 ------EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 819 ------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
....................+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000000000011223567899999999999999999999985
No 221
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=9.6e-37 Score=330.31 Aligned_cols=253 Identities=21% Similarity=0.282 Sum_probs=189.9
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch---hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEE
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 681 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 681 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.++++++|||||+++++|.+.+..++|
T Consensus 25 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 25 EKYE--NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGEE--EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhe--eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 3355 889999999999999986 5699999999865322 345678899999999999999999999999999999
Q ss_pred EcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC
Q 002875 682 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 759 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~ 759 (872)
|||+++++|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999999988754 468899999999999999999999 999999999999999999999999999875433221
Q ss_pred --CCcccccccCchhhhccc-CCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc------------------cccc
Q 002875 760 --SFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------------GLLG 818 (872)
Q Consensus 760 --~~~~~~~~~~~~e~~~~~-~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~------------------~~~~ 818 (872)
....+..+|.+||...+. .++.++||||+||++|||+||+.||............ ....
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 122345667888877654 6788999999999999999999998754321100000 0000
Q ss_pred ccccccccCCCCc---hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 819 EMYNENEVGSSSS---LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 819 ~~~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
....+......+. .+.....+.+++.+||+.||++|||++|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000000 01234568899999999999999999998864
No 222
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=338.63 Aligned_cols=248 Identities=14% Similarity=0.068 Sum_probs=190.0
Q ss_pred chhhhccCCCCCceeeeecC---------CCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCcee--------------
Q 002875 611 TECEEAARPQSAAGCKAVLP---------TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIR-------------- 667 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~---------~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~-------------- 667 (872)
...+.||+|+||.||+|... +|+.||||.+... +.+.+|++++++++|||||+
T Consensus 45 ~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~ 120 (352)
T 2jii_A 45 KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP 120 (352)
T ss_dssp EEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred EEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence 38899999999999999865 4889999999743 45778999999999999988
Q ss_pred -EEEEEec-CCeeEEEEcccCCCChHHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC
Q 002875 668 -LLGFCYN-RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM 741 (872)
Q Consensus 668 -l~~~~~~-~~~~~lv~ey~~~g~L~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~ 741 (872)
+++++.. .+..|+||||+ +|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~~~ 196 (352)
T 2jii_A 121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDPED 196 (352)
T ss_dssp CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEETTE
T ss_pred chhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcCCC
Confidence 6777775 67899999999 9999999975 368999999999999999999999 999999999999999988
Q ss_pred --CeeEccccccccccccCC---------CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCC
Q 002875 742 --EPHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 810 (872)
Q Consensus 742 --~~ki~dfg~~~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~ 810 (872)
.+||+|||+++....... ....++..|.+||...+..++.++|||||||++|||+||+.||........
T Consensus 197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 276 (352)
T 2jii_A 197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE 276 (352)
T ss_dssp EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHH
Confidence 899999999975433211 112345568888988888889999999999999999999999875431111
Q ss_pred cccccccccccccc-c-cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 811 KPIDGLLGEMYNEN-E-VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 811 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
.. ........... . ............++.+++.+||+.||++|||++|+++.|+.+
T Consensus 277 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 334 (352)
T 2jii_A 277 DI-MKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL 334 (352)
T ss_dssp HH-HHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HH-HHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence 10 00000000000 0 000000011235678899999999999999999999999766
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2e-36 Score=322.96 Aligned_cols=248 Identities=21% Similarity=0.228 Sum_probs=193.2
Q ss_pred HhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----------hhHHHHHHHHHHhhccC-CCCceeEEEEE
Q 002875 605 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----------TRIKIVSEFITRIGTVR-HKNLIRLLGFC 672 (872)
Q Consensus 605 ~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----------~~~~~~~~e~~~l~~l~-H~niv~l~~~~ 672 (872)
.+.|. ..+.+|+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++ ||||+++++++
T Consensus 16 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 16 YENYE--PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp TTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhccc--eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34455 889999999999999986 578999999996532 12456788999999996 99999999999
Q ss_pred ecCCeeEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccc
Q 002875 673 YNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 750 (872)
Q Consensus 673 ~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~ 750 (872)
.+++..++||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999975 468889999999999999999999 999999999999999999999999999
Q ss_pred cccccccCCC-CcccccccCchhhhc------ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccc
Q 002875 751 KYLTQLADGS-FPAKIAWTESGEFYN------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 823 (872)
Q Consensus 751 ~~~~~~~~~~-~~~~~~~~~~~e~~~------~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 823 (872)
+......... ...+...|.+||... ...++.++||||+||++|||+||+.||....... ....+...
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~ 244 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML------MLRMIMSG 244 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHT
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH------HHHHHhcC
Confidence 8764332211 122445577788764 3457788999999999999999999986432111 00011111
Q ss_pred cccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 824 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
......+........+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 1010111122334567899999999999999999999864
No 224
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1e-36 Score=341.76 Aligned_cols=194 Identities=18% Similarity=0.216 Sum_probs=161.1
Q ss_pred HHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc---chhHHHHHHHHHHhhccCCCCceeEEEEEecC----
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---- 675 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~---- 675 (872)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++++++|||||++++++...
T Consensus 24 i~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 101 (432)
T 3n9x_A 24 VPDNYI--IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK 101 (432)
T ss_dssp CCTTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred ecCCEE--EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc
Confidence 344555 889999999999999985 67899999999753 23356788999999999999999999999866
Q ss_pred -CeeEEEEcccCCCChHHHhhCC--CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccc
Q 002875 676 -HQAYLLYDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 752 (872)
Q Consensus 676 -~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~ 752 (872)
+..|+||||++ |+|.++++.. .++.....++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 57899999997 5999999874 58889999999999999999999 99999999999999999999999999997
Q ss_pred cccccCC------------------------CCcccccccCchhhh-cccCCcccccchhHHHHHHHHHcCCCCCC
Q 002875 753 LTQLADG------------------------SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTN 803 (872)
Q Consensus 753 ~~~~~~~------------------------~~~~~~~~~~~~e~~-~~~~~~~~~Dv~S~Gvil~el~tg~~p~~ 803 (872)
....... ....++.+|.+||.+ ....++.++||||+||++|||+||..|+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 6432211 122356778889975 56678999999999999999998655443
No 225
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.5e-36 Score=329.07 Aligned_cols=239 Identities=14% Similarity=0.160 Sum_probs=192.4
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||++.. .+|+.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..|+||||++
T Consensus 45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCC
Confidence 889999999999999986 468899999987532 345678899999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--CCc
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFP 762 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--~~~ 762 (872)
+|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 125 ~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 201 (335)
T 2owb_A 125 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL 201 (335)
T ss_dssp TCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred CCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCccccccc
Confidence 9999999864 468899999999999999999999 999999999999999999999999999876432221 122
Q ss_pred ccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002875 763 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 842 (872)
Q Consensus 763 ~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 842 (872)
.+...|.+||......++.++|||||||++|||+||+.||....... ....+.... ...+.. ....+.++
T Consensus 202 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~~---~~~~~~~l 271 (335)
T 2owb_A 202 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNE-YSIPKH---INPVAASL 271 (335)
T ss_dssp CSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTC-CCCCTT---SCHHHHHH
T ss_pred CCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHhcCC-CCCCcc---CCHHHHHH
Confidence 34556788898888788899999999999999999999986432111 000111110 001111 12356788
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 002875 843 ALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 843 ~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+.+||+.||++|||++|++++
T Consensus 272 i~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 272 IQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999864
No 226
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.8e-36 Score=322.57 Aligned_cols=239 Identities=14% Similarity=0.161 Sum_probs=192.2
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.||+|+||.||+|.. .+|+.||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCC
Confidence 889999999999999996 468899999986532 345678889999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--CCc
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFP 762 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--~~~ 762 (872)
+|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........ ...
T Consensus 99 ~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 175 (294)
T 2rku_A 99 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL 175 (294)
T ss_dssp TCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCccccccc
Confidence 9999999865 468899999999999999999999 999999999999999999999999999876432211 122
Q ss_pred ccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002875 763 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 842 (872)
Q Consensus 763 ~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 842 (872)
.+...|.+||......++.++||||+||++|||+||+.||....... ......... ...+. .....+.++
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~---~~~~~~~~l 245 (294)
T 2rku_A 176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNE-YSIPK---HINPVAASL 245 (294)
T ss_dssp CSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC-CCCCT---TSCHHHHHH
T ss_pred cCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhhcc-CCCcc---ccCHHHHHH
Confidence 24556788898887788899999999999999999999986432111 000111111 01111 112457788
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 002875 843 ALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 843 ~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+.+||+.||++|||++|++++
T Consensus 246 i~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 246 IQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHcccChhhCcCHHHHhhC
Confidence 999999999999999999864
No 227
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.2e-36 Score=318.73 Aligned_cols=239 Identities=14% Similarity=0.188 Sum_probs=185.7
Q ss_pred hhhhccCCCCCceeeeecC-CCcEEEEEEeeccc----hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccC
Q 002875 612 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
..+.+|+|+||.||+|... +|+.||||.+.... ...+.+.+|+..+++++||||+++++++.+++..|+||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccC
Confidence 7889999999999999964 79999999997532 224578899999999999999999999999999999999999
Q ss_pred CCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-CCcc
Q 002875 687 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 763 (872)
Q Consensus 687 ~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~-~~~~ 763 (872)
+|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........ ....
T Consensus 95 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 171 (276)
T 2h6d_A 95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 171 (276)
T ss_dssp SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--------
T ss_pred CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCcceeccc
Confidence 9999999865 468888999999999999999999 999999999999999999999999999876433221 1122
Q ss_pred cccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002875 764 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 842 (872)
Q Consensus 764 ~~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 842 (872)
+...|.+||...+..+ +.++||||+||++|||+||+.||....... ....+.... ...+.. ....+.++
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~---~~~~l~~l 241 (276)
T 2h6d_A 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT------LFKKIRGGV-FYIPEY---LNRSVATL 241 (276)
T ss_dssp -----CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---SCHHHHHH
T ss_pred CCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH------HHHHhhcCc-ccCchh---cCHHHHHH
Confidence 4455777887765544 678999999999999999999986432110 001111000 001111 12457788
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 002875 843 ALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 843 ~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+.+||+.||++|||++|++++
T Consensus 242 i~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 242 LMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHccCChhhCCCHHHHHhC
Confidence 999999999999999999975
No 228
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4e-36 Score=321.31 Aligned_cols=241 Identities=19% Similarity=0.231 Sum_probs=194.0
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred HhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 788999999999999985 679999999997542 34677899999999999999999999999999999999999999
Q ss_pred ChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--CCcccc
Q 002875 689 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 765 (872)
Q Consensus 689 ~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--~~~~~~ 765 (872)
+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........ ....+.
T Consensus 106 ~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 182 (303)
T 3a7i_A 106 SALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 182 (303)
T ss_dssp EHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSC
T ss_pred cHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCC
Confidence 99999976 458899999999999999999999 999999999999999999999999999865433221 122345
Q ss_pred cccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002875 766 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 845 (872)
Q Consensus 766 ~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 845 (872)
..|.+||......++.++|||||||++|||+||+.||....... ....+.......... .....+.+++.+
T Consensus 183 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~l~~li~~ 253 (303)
T 3a7i_A 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK------VLFLIPKNNPPTLEG---NYSKPLKEFVEA 253 (303)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSCCCCCCS---SCCHHHHHHHHH
T ss_pred cCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH------HHHHhhcCCCCCCcc---ccCHHHHHHHHH
Confidence 56788898888888899999999999999999999986432111 000000000000111 122457789999
Q ss_pred cccCCCCCCCCHHHHHHHH
Q 002875 846 CTRSTPSDRPSMEEALKLL 864 (872)
Q Consensus 846 cl~~dp~~Rpt~~~v~~~L 864 (872)
||+.||++|||++|++++.
T Consensus 254 ~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp HCCSSGGGSCCHHHHTTCH
T ss_pred HcCCChhhCcCHHHHhhCh
Confidence 9999999999999998753
No 229
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-36 Score=327.61 Aligned_cols=253 Identities=22% Similarity=0.244 Sum_probs=187.8
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchh------HHHHHHHHHHhhccCCCCceeEEEEEecCCee
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 678 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~------~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 678 (872)
+.|. ..+.+|+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++|||||++++++.+.+..
T Consensus 10 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 10 KRYE--KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp ---C--EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred cccE--EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4455 889999999999999996 46999999999753211 24677899999999999999999999999999
Q ss_pred EEEEcccCCCChHHHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccc
Q 002875 679 YLLYDYLPNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 755 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~ 755 (872)
++||||+++ +|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 999999986 899888753 46788899999999999999999 99999999999999999999999999987653
Q ss_pred ccCC--CCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCC---------------Cccccccc
Q 002875 756 LADG--SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL 817 (872)
Q Consensus 756 ~~~~--~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~---------------~~~~~~~~ 817 (872)
.... ....++.+|.+||...+ ..++.++||||+||++|||+||..||....... .|+.....
T Consensus 164 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 164 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp SCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSS
T ss_pred CCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccC
Confidence 3221 12235566788887754 457889999999999999999988876433110 00000000
Q ss_pred cccccccccCCCC---chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 002875 818 GEMYNENEVGSSS---SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLL 864 (872)
Q Consensus 818 ~~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L 864 (872)
.+.......+..+ .......++.+++.+||+.||++|||++|++++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 0000000000000 0012235688999999999999999999999763
No 230
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.4e-36 Score=327.85 Aligned_cols=251 Identities=16% Similarity=0.135 Sum_probs=188.5
Q ss_pred hhHHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch---------hHHHHHHHHHHhhccCCCCceeEEEE
Q 002875 602 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGF 671 (872)
Q Consensus 602 ~~~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~~~ 671 (872)
..+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ....+.+|++++++++||||++++++
T Consensus 6 ~~l~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 83 (322)
T 2ycf_A 6 KALRDEYI--MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 83 (322)
T ss_dssp HHHHHHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hhhhhcee--EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeE
Confidence 34555666 889999999999999985 5789999999864321 13357889999999999999999999
Q ss_pred EecCCeeEEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC---eeEc
Q 002875 672 CYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLA 746 (872)
Q Consensus 672 ~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~---~ki~ 746 (872)
+..++ .|+||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++. +||+
T Consensus 84 ~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 84 FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp EESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred EcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 97765 8999999999999999875 357888899999999999999999 9999999999999987654 9999
Q ss_pred cccccccccccCC-CCcccccccCchhhhc---ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccc
Q 002875 747 EFGFKYLTQLADG-SFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 822 (872)
Q Consensus 747 dfg~~~~~~~~~~-~~~~~~~~~~~~e~~~---~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 822 (872)
|||+++....... ....++..|.+||... ...++.++||||+||++|||+||..||......... . ..+..
T Consensus 160 Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~---~~~~~ 234 (322)
T 2ycf_A 160 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL--K---DQITS 234 (322)
T ss_dssp CCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCH--H---HHHHH
T ss_pred cCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHH--H---HHHHh
Confidence 9999875432211 0112445677888763 456788999999999999999999998754322110 0 00111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 823 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
......+.........+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 00000000111234567899999999999999999999864
No 231
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.3e-36 Score=318.95 Aligned_cols=229 Identities=12% Similarity=0.053 Sum_probs=181.9
Q ss_pred hcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch----hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEE
Q 002875 607 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 681 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 681 (872)
.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+..+++++|||||++++++.+++..|+|
T Consensus 32 ~y~--i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 32 RYR--LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TEE--EEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEE--EEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 355 789999999999999996 4599999999975422 246788999999999999999999999999999999
Q ss_pred EcccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCC
Q 002875 682 YDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 761 (872)
Q Consensus 682 ~ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~ 761 (872)
|||+++|+|.++++......+...|+.|++.||+|||+. +|+||||||+||+++.++.+||+++|..
T Consensus 110 ~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~---------- 176 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATM---------- 176 (286)
T ss_dssp EECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCC----------
T ss_pred EEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecccc----------
Confidence 999999999999987766777889999999999999999 9999999999999999999999866532
Q ss_pred cccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002875 762 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 841 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (872)
+ .++.++|||||||++|||+||+.||.+.......... ....................++.+
T Consensus 177 --------~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 238 (286)
T 3uqc_A 177 --------P-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDTAGQPIEPADIDRDIPFQISA 238 (286)
T ss_dssp --------T-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCTTSCBCCHHHHCTTSCHHHHH
T ss_pred --------C-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHhccCCCChhhcccCCCHHHHH
Confidence 1 2567789999999999999999999865432211100 000111100000001123356788
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHcccCC
Q 002875 842 VALLCTRSTPSDRPSMEEALKLLSGLKP 869 (872)
Q Consensus 842 l~~~cl~~dp~~Rpt~~~v~~~L~~~~~ 869 (872)
++.+||+.||++| |++|+++.|+.+..
T Consensus 239 li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 239 VAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred HHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 9999999999999 99999999987643
No 232
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=323.17 Aligned_cols=241 Identities=16% Similarity=0.196 Sum_probs=188.4
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCCh
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 690 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~L 690 (872)
..+.+|+|+||.||+|.. .+|+.||||.+.... ..+.+.+|+.++++++||||+++++++.+.+..|+||||+++|+|
T Consensus 33 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred hheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 888999999999999986 469999999997543 345678899999999999999999999999999999999999999
Q ss_pred HHHhh---CCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC--CCcccc
Q 002875 691 SEKIR---TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 765 (872)
Q Consensus 691 ~~~l~---~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--~~~~~~ 765 (872)
.+++. ...++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........ ....+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 188 (314)
T 3com_A 112 SDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGT 188 (314)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCC
Confidence 99986 3568899999999999999999999 999999999999999999999999999865433211 122345
Q ss_pred cccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002875 766 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 845 (872)
Q Consensus 766 ~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 845 (872)
..|.+||......++.++||||+||++|||+||+.||......... ....... .............+.+++.+
T Consensus 189 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~l~~li~~ 261 (314)
T 3com_A 189 PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI------FMIPTNP-PPTFRKPELWSDNFTDFVKQ 261 (314)
T ss_dssp GGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHHSC-CCCCSSGGGSCHHHHHHHHH
T ss_pred CCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHhcCC-CcccCCcccCCHHHHHHHHH
Confidence 5678889888878899999999999999999999998743321100 0000000 00011111123467789999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 002875 846 CTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 846 cl~~dp~~Rpt~~~v~~~ 863 (872)
||+.||++|||++|++++
T Consensus 262 ~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 262 CLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HTCSCTTTSCCHHHHTTS
T ss_pred HccCChhhCcCHHHHHhC
Confidence 999999999999999863
No 233
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=320.34 Aligned_cols=242 Identities=16% Similarity=0.164 Sum_probs=185.8
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCCCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 689 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g~ 689 (872)
....||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|+.++++++|||||++++++.+.+..++||||+++|+
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 105 (295)
T 2clq_A 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS 105 (295)
T ss_dssp SBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEE
T ss_pred CcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCC
Confidence 445899999999999985 678999999997543 335678899999999999999999999999999999999999999
Q ss_pred hHHHhhCC-----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC-CCCeeEccccccccccccCC--CC
Q 002875 690 LSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADG--SF 761 (872)
Q Consensus 690 L~~~l~~~-----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~-~~~~ki~dfg~~~~~~~~~~--~~ 761 (872)
|.+++... .++.....++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++....... ..
T Consensus 106 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 106 LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp HHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred HHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 99999753 24777888999999999999999 9999999999999987 89999999999875432211 12
Q ss_pred cccccccCchhhhccc--CCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002875 762 PAKIAWTESGEFYNAM--KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 839 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~--~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (872)
..+...|.+||..... .++.++|||||||++|||+||+.||............. ...... ...+ .....++
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~-~~~~---~~~~~~~ 255 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVH-PEIP---ESMSAEA 255 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH---HHHCCC-CCCC---TTSCHHH
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh---cccccc-cccc---ccCCHHH
Confidence 2244557788877543 37889999999999999999999986432111000000 000000 0011 1123467
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHH
Q 002875 840 LDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 840 ~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.+++.+||+.||++|||++|++++
T Consensus 256 ~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 256 KAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHccCChhhCCCHHHHhcC
Confidence 789999999999999999999864
No 234
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.4e-36 Score=331.77 Aligned_cols=247 Identities=17% Similarity=0.145 Sum_probs=190.5
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchh------------------HHHHHHHHHHhhccCCCCceeEEEEEe
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR------------------IKIVSEFITRIGTVRHKNLIRLLGFCY 673 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~------------------~~~~~~e~~~l~~l~H~niv~l~~~~~ 673 (872)
..+.+|+|+||.||+|.. +|+.||||++...... .+.+.+|++++++++||||+++++++.
T Consensus 35 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 113 (348)
T 2pml_X 35 IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEE
T ss_pred EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 889999999999999999 9999999999753221 178899999999999999999999999
Q ss_pred cCCeeEEEEcccCCCChHHH------hhC----CCCHHHHHHHHHHHHHHHHHHhh-CCCCCcccCCCCCCCeeeCCCCC
Q 002875 674 NRHQAYLLYDYLPNGNLSEK------IRT----KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENME 742 (872)
Q Consensus 674 ~~~~~~lv~ey~~~g~L~~~------l~~----~~~~~~~~~i~~~i~~gl~~lH~-~~~~~i~Hrdlk~~Nill~~~~~ 742 (872)
+.+..++||||+++|+|.++ +.. ..++.....++.|++.||+|||+ . +|+||||||+||+++.++.
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~~~ 190 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKNGR 190 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTTSC
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCCCc
Confidence 99999999999999999998 643 35788999999999999999998 7 9999999999999999999
Q ss_pred eeEccccccccccccCCCCcccccccCchhhhccc-CCcc-cccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccc
Q 002875 743 PHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-KEEM-YMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEM 820 (872)
Q Consensus 743 ~ki~dfg~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~-~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 820 (872)
+||+|||++............+...|.+||..... .++. ++||||+||++|||+||..||.......... .......
T Consensus 191 ~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~i~~~~ 269 (348)
T 2pml_X 191 VKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF-NNIRTKN 269 (348)
T ss_dssp EEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH-HHHTSCC
T ss_pred EEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH-HHHhccC
Confidence 99999999876433322223345567788887665 5555 8999999999999999999987543311000 0000000
Q ss_pred cc-c---------ccc-CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 821 YN-E---------NEV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 821 ~~-~---------~~~-~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.. + ... ............+.+++.+||+.||++|||++|++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 270 IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp CCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 0 000 0000001233567899999999999999999999874
No 235
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.1e-36 Score=329.29 Aligned_cols=251 Identities=21% Similarity=0.317 Sum_probs=188.5
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch---hHHHHHHHHHHhhccCCCCceeEEEEEec-------
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYN------- 674 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~------- 674 (872)
..|. ..+.||+|+||.||+|.. .+|+.||||++..... ....+.+|++++++++|||||++++++.+
T Consensus 17 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 17 SKYE--KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGEE--EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccee--EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 4455 889999999999999986 6899999999864322 24567789999999999999999999986
Q ss_pred -CCeeEEEEcccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccc
Q 002875 675 -RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 750 (872)
Q Consensus 675 -~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~ 750 (872)
.+..|+||||+++ +|.+.+.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 3468999999985 78777765 458899999999999999999999 999999999999999999999999999
Q ss_pred cccccccCC------CCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCC-------------
Q 002875 751 KYLTQLADG------SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN------------- 810 (872)
Q Consensus 751 ~~~~~~~~~------~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~------------- 810 (872)
++....... ....++.+|.+||...+ ..++.++||||+||++|||+||+.||.+......
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 875432111 11224566788887754 4578999999999999999999999875331100
Q ss_pred --ccccccccccccccc--cCCCCchHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 811 --KPIDGLLGEMYNENE--VGSSSSLQDE------IKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 811 --~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+...... +.+.... ........+. ...+.+++.+||+.||++|||++|++++
T Consensus 251 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 251 EVWPNVDNY-ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTSTTGGGC-GGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccc-hhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0000000 0000000 0001111111 2457899999999999999999999875
No 236
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.9e-36 Score=321.52 Aligned_cols=246 Identities=17% Similarity=0.260 Sum_probs=185.6
Q ss_pred HhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEec---------
Q 002875 605 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--------- 674 (872)
Q Consensus 605 ~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--------- 674 (872)
.+.|. ..+.+|+|+||.||+|.. .+|+.||||++.......+.+.+|+.++++++||||++++++|.+
T Consensus 5 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFE--EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccch--hhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 34565 889999999999999985 589999999997665567788999999999999999999999864
Q ss_pred ----CCeeEEEEcccCCCChHHHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcc
Q 002875 675 ----RHQAYLLYDYLPNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 747 (872)
Q Consensus 675 ----~~~~~lv~ey~~~g~L~~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~d 747 (872)
.+..|+||||+++|+|.+++... .++.+.+.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 35789999999999999999743 36788889999999999999999 999999999999999999999999
Q ss_pred ccccccccccC----------------CCCcccccccCchhhhccc-CCcccccchhHHHHHHHHHcCCCCCCCCCCCCC
Q 002875 748 FGFKYLTQLAD----------------GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 810 (872)
Q Consensus 748 fg~~~~~~~~~----------------~~~~~~~~~~~~~e~~~~~-~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~ 810 (872)
||++....... .....+...|.+||...+. .++.++||||+||++|||+| |+.......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~- 235 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV- 235 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH-
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHH-
Confidence 99986543210 0112244557788887643 68889999999999999998 443211100
Q ss_pred ccccccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 811 KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.....+..................+.+++.+||+.||++|||++|++++
T Consensus 236 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 236 ----NILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp ----HHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----HHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 0000000000000011112223457789999999999999999999875
No 237
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.4e-36 Score=353.15 Aligned_cols=240 Identities=15% Similarity=0.114 Sum_probs=193.4
Q ss_pred chhhhccCCCCCceeeeec-CCCcEEEEEEeeccc----hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEEcc
Q 002875 611 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDY 684 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey 684 (872)
...+.||+|+||.||+|.. .+|+.||||+++... ...+.+..|..++..+ +||||+++++++++.+..|+||||
T Consensus 344 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~ 423 (674)
T 3pfq_A 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEY 423 (674)
T ss_dssp EEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEEC
T ss_pred EEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeC
Confidence 3888999999999999985 578899999997532 2345677788888877 799999999999999999999999
Q ss_pred cCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--CC
Q 002875 685 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GS 760 (872)
Q Consensus 685 ~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~--~~ 760 (872)
+++|+|.++++. ..++.+...|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 424 ~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~ 500 (674)
T 3pfq_A 424 VNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 500 (674)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBC
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccc
Confidence 999999999975 568888999999999999999999 99999999999999999999999999997532221 12
Q ss_pred CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002875 761 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 840 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (872)
...++.+|++||++....++.++|||||||++|||+||+.||.+.... .....+.... ...+. ....++.
T Consensus 501 ~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~~~~ 570 (674)
T 3pfq_A 501 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN-VAYPK---SMSKEAV 570 (674)
T ss_dssp CCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHSSC-CCCCT---TSCHHHH
T ss_pred cccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCC-CCCCc---cCCHHHH
Confidence 233667789999998888999999999999999999999999754321 1111111111 11111 2235678
Q ss_pred HHHHHcccCCCCCCCCH-----HHHHHH
Q 002875 841 DVALLCTRSTPSDRPSM-----EEALKL 863 (872)
Q Consensus 841 ~l~~~cl~~dp~~Rpt~-----~~v~~~ 863 (872)
+++.+||+.||++||++ +|+.++
T Consensus 571 ~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 571 AICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 89999999999999997 777643
No 238
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.7e-35 Score=315.90 Aligned_cols=248 Identities=19% Similarity=0.238 Sum_probs=186.9
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch---hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
..+.+|+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-
Confidence 788999999999999986 4799999999865432 24567889999999999999999999999999999999998
Q ss_pred CChHHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccC--CCC
Q 002875 688 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSF 761 (872)
Q Consensus 688 g~L~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~--~~~ 761 (872)
|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....... ...
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (299)
T 2r3i_A 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162 (299)
T ss_dssp EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTS
T ss_pred CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccCc
Confidence 699999864 357888899999999999999999 99999999999999999999999999986543221 112
Q ss_pred cccccccCchhhhcccC-CcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc---------ccccccc-----cccccc
Q 002875 762 PAKIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLGEM-----YNENEV 826 (872)
Q Consensus 762 ~~~~~~~~~~e~~~~~~-~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~---------~~~~~~~-----~~~~~~ 826 (872)
..++..|.+||...+.. ++.++||||+||++|||+||+.||........... ....... +.+...
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T 2r3i_A 163 EVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242 (299)
T ss_dssp CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSC
T ss_pred ccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhh
Confidence 23455677888776544 78899999999999999999999875432110000 0000000 000000
Q ss_pred C-CCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 827 G-SSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 827 ~-~~~~~----~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
. ..... .....++.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp CCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 00000 1123567899999999999999999999874
No 239
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.7e-36 Score=322.56 Aligned_cols=246 Identities=17% Similarity=0.202 Sum_probs=188.2
Q ss_pred hhcCcchhhhccCCCCCceeeeecC-CCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEc
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 683 (872)
+.|. ..+.||+|+||.||+|... +|+.||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 19 ~~y~--i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 19 EVWE--IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GTEE--EEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccee--ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3455 8889999999999999974 68999999987543 345678899999999999999999999999999999999
Q ss_pred ccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc--C
Q 002875 684 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA--D 758 (872)
Q Consensus 684 y~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~--~ 758 (872)
|+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999999998853 468899999999999999999999 9999999999999999999999999987532111 1
Q ss_pred CCCcccccccCchhhh-----cccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002875 759 GSFPAKIAWTESGEFY-----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 833 (872)
Q Consensus 759 ~~~~~~~~~~~~~e~~-----~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (872)
.....+...|.+||.. ....++.++|||||||++|||+||+.|+....... ......... ........
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~~~ 246 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSD-PPTLLTPS 246 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSC-CCCCSSGG
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHhccC-CcccCCcc
Confidence 1112244557778876 34567889999999999999999999986433111 000111010 00001111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 834 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 834 ~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.....+.+++.+||+.||++|||++|++++
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 223467789999999999999999999864
No 240
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.7e-36 Score=316.35 Aligned_cols=249 Identities=16% Similarity=0.171 Sum_probs=193.8
Q ss_pred hHHhhcCcchhhhccCCCCCceeeeecC-CCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCee
Q 002875 603 DVLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 678 (872)
Q Consensus 603 ~~~~~~~~~~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 678 (872)
.+.+.|. ..+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 19 ~~~~~y~--i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 19 TFAERYN--IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHhhcce--eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 3445566 8899999999999999864 79999999996532 2466788999999999999999999999999999
Q ss_pred EEEEcccCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC---CCeeEcccccccc
Q 002875 679 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYL 753 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~---~~~ki~dfg~~~~ 753 (872)
++||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++..
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 999999999999998854 568889999999999999999999 99999999999999754 4699999999875
Q ss_pred ccccCCC-CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002875 754 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 832 (872)
Q Consensus 754 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (872)
....... ...+...|.+||...+ .++.++||||+||++|||+||+.||....... ....+.........+..
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~ 246 (287)
T 2wei_A 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGKYAFDLPQW 246 (287)
T ss_dssp BCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCSGGG
T ss_pred ecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHcCCCCCCchhh
Confidence 4432221 1224556778887765 47889999999999999999999987533111 00111111000001111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 833 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 833 ~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.....++.+++.+||+.||++|||++|++++
T Consensus 247 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 2233567889999999999999999999874
No 241
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=337.47 Aligned_cols=246 Identities=19% Similarity=0.239 Sum_probs=174.3
Q ss_pred hhhccCCCCCceeeeecC---CCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEe--cCCeeEEEEcccCC
Q 002875 613 CEEAARPQSAAGCKAVLP---TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCY--NRHQAYLLYDYLPN 687 (872)
Q Consensus 613 ~~~~g~g~~~~v~~~~~~---~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~~lv~ey~~~ 687 (872)
.++||+|+||.||+|... +++.||||++..... .+.+.+|+.++++++|||||++++++. .....|+||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 457999999999999854 688999999975432 345778999999999999999999995 4678999999997
Q ss_pred CChHHHhhC-----------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee----CCCCCeeEccccccc
Q 002875 688 GNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKY 752 (872)
Q Consensus 688 g~L~~~l~~-----------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill----~~~~~~ki~dfg~~~ 752 (872)
|+|.+++.. ..++...+.|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 180 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 180 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence 588887752 267888899999999999999999 99999999999999 677899999999997
Q ss_pred cccccC-----CCCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCc--cc-cccccccc--
Q 002875 753 LTQLAD-----GSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--PI-DGLLGEMY-- 821 (872)
Q Consensus 753 ~~~~~~-----~~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~--~~-~~~~~~~~-- 821 (872)
...... .....++.+|.+||+..+ ..++.++||||+||++|||+||+.||......... .. ...+..+.
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~ 260 (405)
T 3rgf_A 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV 260 (405)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHH
T ss_pred ecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHh
Confidence 654321 111235666888888765 45889999999999999999999999744321100 00 00000000
Q ss_pred -----c--------------------ccccCCCCchH-------HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 822 -----N--------------------ENEVGSSSSLQ-------DEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 822 -----~--------------------~~~~~~~~~~~-------~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
. ........... .....+.+++.+||+.||++|||++|++++
T Consensus 261 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 261 MGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0 00000000000 002457899999999999999999999875
No 242
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.8e-36 Score=326.84 Aligned_cols=250 Identities=14% Similarity=0.174 Sum_probs=169.2
Q ss_pred HHhhcCcchh-hhccCCCCCceeeeecC-CCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEec----CCe
Q 002875 604 VLRSFNSTEC-EEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQ 677 (872)
Q Consensus 604 ~~~~~~~~~~-~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~ 677 (872)
+.+.|. .. +.||+|+||.||+|... +|+.||||++....... .+....++.++||||+++++++.. ...
T Consensus 26 ~~~~y~--i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQ--LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR---QEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEE--EEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeE--ecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHH---HHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 444555 53 46999999999999864 79999999997543222 223334566799999999999975 456
Q ss_pred eEEEEcccCCCChHHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC---CCCeeEccccc
Q 002875 678 AYLLYDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGF 750 (872)
Q Consensus 678 ~~lv~ey~~~g~L~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~---~~~~ki~dfg~ 750 (872)
.++|||||++|+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 89999999999999999763 57889999999999999999999 9999999999999976 45599999999
Q ss_pred cccccccCCCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002875 751 KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 830 (872)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (872)
++...........++..|.+||......++.++||||+||++|||+||..||........... ....+.........+
T Consensus 178 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 178 AKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG--MKRRIRLGQYGFPNP 255 (336)
T ss_dssp CEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCTT
T ss_pred ceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh--HHHhhhccccccCch
Confidence 976543333333455667888988777788899999999999999999999875432211000 000000000000011
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 831 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 831 ~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
........+.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 112233567789999999999999999999974
No 243
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5e-36 Score=318.49 Aligned_cols=242 Identities=15% Similarity=0.178 Sum_probs=176.2
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch---hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.++...++.++||||+++++++.+++..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~- 89 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD- 89 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-
Confidence 889999999999999985 6899999999975422 23445555666888999999999999999999999999997
Q ss_pred CChHHHhhC------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC-
Q 002875 688 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 760 (872)
Q Consensus 688 g~L~~~l~~------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~- 760 (872)
|+|.+++.. ..++.....++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++........
T Consensus 90 ~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (290)
T 3fme_A 90 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167 (290)
T ss_dssp EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccccccccc
Confidence 588887753 4688999999999999999999842 8999999999999999999999999998754332221
Q ss_pred CcccccccCchhhh----cccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 761 FPAKIAWTESGEFY----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 761 ~~~~~~~~~~~e~~----~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
...++..|.+||.. ....++.++||||+||++|||+||+.||........ .............. .....
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~ 240 (290)
T 3fme_A 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-----QLKQVVEEPSPQLP--ADKFS 240 (290)
T ss_dssp --CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-----HHHHHHHSCCCCCC--TTTSC
T ss_pred ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH-----HHHHHhccCCCCcc--cccCC
Confidence 22345567788875 455678899999999999999999999864321110 01111111101000 01123
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 837 KLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.++.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 241 AEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 467889999999999999999999863
No 244
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.7e-36 Score=320.77 Aligned_cols=248 Identities=19% Similarity=0.238 Sum_probs=185.2
Q ss_pred chhhhccCCCCCceeeeec--CCCc--EEEEEEeecc----chhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEE
Q 002875 611 TECEEAARPQSAAGCKAVL--PTGI--TVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~--~~g~--~vavK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 682 (872)
...+.||+|+||.||+|+. .+++ .||||+++.. ....+.+.+|++++++++||||+++++++.+++ .++||
T Consensus 21 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~ 99 (291)
T 1u46_A 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVT 99 (291)
T ss_dssp EEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEE
T ss_pred eeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeE
Confidence 3889999999999999984 3333 6999998753 234567889999999999999999999998765 89999
Q ss_pred cccCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC
Q 002875 683 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 759 (872)
Q Consensus 683 ey~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~ 759 (872)
||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 176 (291)
T 1u46_A 100 ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176 (291)
T ss_dssp ECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC
T ss_pred ecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccccccc
Confidence 99999999999864 368889999999999999999999 999999999999999999999999999876533221
Q ss_pred -----CCcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002875 760 -----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 833 (872)
Q Consensus 760 -----~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (872)
....+...|.+||......++.++||||+||++|||+| |..||....... ....+...... .+...
T Consensus 177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~--~~~~~ 248 (291)
T 1u46_A 177 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------ILHKIDKEGER--LPRPE 248 (291)
T ss_dssp EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTSCCC--CCCCT
T ss_pred chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH------HHHHHHccCCC--CCCCc
Confidence 11123335778888877778889999999999999999 888876432111 01111110000 01111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 834 DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 834 ~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
....++.+++.+||+.||++|||++|+++.|+.+.+.
T Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 249 DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 2234678899999999999999999999999987654
No 245
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.3e-36 Score=323.83 Aligned_cols=243 Identities=15% Similarity=0.181 Sum_probs=178.1
Q ss_pred cchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc-hhHHHHHHHHHHhhccC-CCCceeEEEEEe--------cCCee
Q 002875 610 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCY--------NRHQA 678 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~~~~~--------~~~~~ 678 (872)
|...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.+++++. |||||++++++. .....
T Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 44889999999999999985 689999999986543 34567889999999996 999999999994 34468
Q ss_pred EEEEcccCCCChHHHhhC-----CCCHHHHHHHHHHHHHHHHHHhhCCCCC--cccCCCCCCCeeeCCCCCeeEcccccc
Q 002875 679 YLLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFK 751 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~-----~~~~~~~~~i~~~i~~gl~~lH~~~~~~--i~Hrdlk~~Nill~~~~~~ki~dfg~~ 751 (872)
++||||+. |+|.+++.. ..++.+.+.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 99999996 799998853 468899999999999999999998 7 999999999999999999999999998
Q ss_pred ccccccCCC--------------CcccccccCchhhh---cccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc
Q 002875 752 YLTQLADGS--------------FPAKIAWTESGEFY---NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID 814 (872)
Q Consensus 752 ~~~~~~~~~--------------~~~~~~~~~~~e~~---~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~ 814 (872)
+........ ...++..|.+||.. ....++.++|||||||++|||+||+.||........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---- 261 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI---- 261 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh----
Confidence 754322110 11244557788876 455678899999999999999999999875432110
Q ss_pred ccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccC
Q 002875 815 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 868 (872)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~ 868 (872)
........ . ... ....+.+++.+||+.||++|||++|++++|+.+.
T Consensus 262 --~~~~~~~~-~--~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 262 --VNGKYSIP-P--HDT---QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp ------CCCC-T--TCC---SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred --hcCcccCC-c--ccc---cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111100 0 000 1123668889999999999999999999998663
No 246
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.6e-34 Score=326.37 Aligned_cols=345 Identities=23% Similarity=0.340 Sum_probs=243.7
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
++.++.|++++|.+..+ | .+..+++|++|+|++|.+.+..+ |..+++|++|++++|.+.+..+ +.++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~~l-~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKSI-D-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCccC-c-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 45788899988888754 4 47788889999999998886544 8888899999999888886544 88888999999
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcc
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 176 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~ 176 (872)
+++|.+.+..+ |.++++|++|++++|.+.+. + .++.+++|++|+++. ...+.. .+.++++|+.|++++|.+.+
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~~-~~~~~~--~~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFGN-QVTDLK--PLANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEEE-SCCCCG--GGTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecCC-cccCch--hhccCCCCCEEECcCCcCCC
Confidence 99888876533 88888999999988888653 3 478888888888863 333222 27778888888888888764
Q ss_pred cCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccC
Q 002875 177 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 256 (872)
Q Consensus 177 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 256 (872)
. ..+..+++|++|++++|.+.+..| +..+++|++|++++|++++. ..+..+++|+.|++++|.+.+..+ +..
T Consensus 192 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 263 (466)
T 1o6v_A 192 I--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG 263 (466)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred C--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhc
Confidence 3 346777888888888888876554 66778888888888887753 357777888888888888776544 777
Q ss_pred CCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEE
Q 002875 257 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 336 (872)
Q Consensus 257 l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 336 (872)
+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|+
T Consensus 264 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--------------------------~~~l~~L~~L~ 315 (466)
T 1o6v_A 264 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--------------------------ISNLKNLTYLT 315 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--------------------------GGGCTTCSEEE
T ss_pred CCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--------------------------hcCCCCCCEEE
Confidence 7888888888887775443 6677777777777777653221 34555666666
Q ss_pred cCCCccccccCccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccccCCCCCCCcCCcccCCCcccccccccccccC
Q 002875 337 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNIT 416 (872)
Q Consensus 337 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~ 416 (872)
+++|++++..| +..+++|+.|++++|.+.+. ..+..+++|++|++++|+ +.+..| +..+++|+.|++++|.++
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~-l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQ-ISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSC-CCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCc-cCccch--hhcCCCCCEEeccCCccc
Confidence 66666655444 45566666666666666543 345555666666666663 233333 455666666777766665
Q ss_pred C
Q 002875 417 G 417 (872)
Q Consensus 417 ~ 417 (872)
+
T Consensus 389 ~ 389 (466)
T 1o6v_A 389 N 389 (466)
T ss_dssp C
T ss_pred C
Confidence 4
No 247
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.4e-36 Score=333.08 Aligned_cols=248 Identities=19% Similarity=0.186 Sum_probs=191.2
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccC--------CCCceeEEEEEe----cCCee
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR--------HKNLIRLLGFCY----NRHQA 678 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~~~~~----~~~~~ 678 (872)
..+.||+|+||.||+|.. .+|+.||||++.......+.+.+|+.++++++ |||||++++++. +....
T Consensus 41 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 120 (397)
T 1wak_A 41 VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120 (397)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEE
T ss_pred EEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceE
Confidence 889999999999999984 67899999999866666778889999999886 788999999998 55689
Q ss_pred EEEEcccCCCChHHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCC-------------
Q 002875 679 YLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM------------- 741 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~------------- 741 (872)
|+||||+ +|++.+++.. ..++.+...++.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 121 ~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~~~~~~ 197 (397)
T 1wak_A 121 CMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEATEW 197 (397)
T ss_dssp EEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHHHHC--
T ss_pred EEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhhhhHHH
Confidence 9999999 5566666643 3688999999999999999999854 899999999999999775
Q ss_pred ------------------------------------CeeEccccccccccccCCCCcccccccCchhhhcccCCcccccc
Q 002875 742 ------------------------------------EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDV 785 (872)
Q Consensus 742 ------------------------------------~~ki~dfg~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~Dv 785 (872)
.+||+|||+++....... ...++.+|++||+..+..++.++||
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Di 276 (397)
T 1wak_A 198 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT-EDIQTRQYRSLEVLIGSGYNTPADI 276 (397)
T ss_dssp -------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSC-SCCSCGGGCCHHHHHTSCCCTHHHH
T ss_pred hhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCc-cCCCCCcccCChhhcCCCCCcHHHH
Confidence 799999999976543322 2235667888998888888999999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCCCCCcccc-------cccc--------------cccccc-------cc----------C
Q 002875 786 YGFGEIILEILTNGRLTNAGSSLQNKPID-------GLLG--------------EMYNEN-------EV----------G 827 (872)
Q Consensus 786 ~S~Gvil~el~tg~~p~~~~~~~~~~~~~-------~~~~--------------~~~~~~-------~~----------~ 827 (872)
||+||++|||+||+.||............ .... ..+... .. .
T Consensus 277 wslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (397)
T 1wak_A 277 WSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVE 356 (397)
T ss_dssp HHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhh
Confidence 99999999999999999754322110000 0000 000000 00 0
Q ss_pred CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 828 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 828 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
......+....+.+++.+||+.||++|||++|++++
T Consensus 357 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 357 KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp TSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 001124456678899999999999999999999875
No 248
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.8e-36 Score=332.27 Aligned_cols=246 Identities=16% Similarity=0.222 Sum_probs=181.9
Q ss_pred chhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEec---------------
Q 002875 611 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--------------- 674 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--------------- 674 (872)
...+.||+|+||.||+|.. .+|+.||||++..... ...+|++++++++|||||++++++..
T Consensus 10 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~ 86 (383)
T 3eb0_A 10 SLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDH 86 (383)
T ss_dssp EEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC--------------
T ss_pred EEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCccccccccccccc
Confidence 3889999999999999985 7899999999865432 23468999999999999999999854
Q ss_pred -----------------------CCeeEEEEcccCCCChHHHhhC------CCCHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 002875 675 -----------------------RHQAYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAI 725 (872)
Q Consensus 675 -----------------------~~~~~lv~ey~~~g~L~~~l~~------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i 725 (872)
....++||||++ |+|.+.+.. ..++.....++.|+++||+|||+. +|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---gi 162 (383)
T 3eb0_A 87 NKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL---GI 162 (383)
T ss_dssp -----------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TE
T ss_pred ccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---cC
Confidence 234889999998 588777652 467888999999999999999999 99
Q ss_pred ccCCCCCCCeeeC-CCCCeeEccccccccccccCCC-CcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCC
Q 002875 726 PHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLT 802 (872)
Q Consensus 726 ~Hrdlk~~Nill~-~~~~~ki~dfg~~~~~~~~~~~-~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~ 802 (872)
+||||||+||+++ .++.+||+|||+++........ ...++.+|.+||...+ ..++.++||||+||++|||+||+.||
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 242 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCC
Confidence 9999999999998 6889999999999765333222 2234566788887655 45889999999999999999999998
Q ss_pred CCCCCCCCcccc-ccc-----------cccccccccC--CCCchH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 803 NAGSSLQNKPID-GLL-----------GEMYNENEVG--SSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 803 ~~~~~~~~~~~~-~~~-----------~~~~~~~~~~--~~~~~~-----~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.+.......... ... ...+.....+ ....+. ....++.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 243 SGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAH 322 (383)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 754321100000 000 0000000000 000111 123457899999999999999999999854
No 249
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.9e-36 Score=329.90 Aligned_cols=251 Identities=20% Similarity=0.265 Sum_probs=175.8
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc---chhHHHHHHHHHHhhccCCCCceeEEEEEecC------
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------ 675 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------ 675 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...
T Consensus 29 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 29 ERYQ--NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp TTEE--EEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceE--EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 4455 889999999999999984 67999999999653 22356778999999999999999999999754
Q ss_pred CeeEEEEcccCCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccc
Q 002875 676 HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 754 (872)
Q Consensus 676 ~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~ 754 (872)
...|+||||+ +++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred CeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 5689999999 6899998875 468889999999999999999999 9999999999999999999999999999764
Q ss_pred cccCCCCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc-c--------ccccc-----
Q 002875 755 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-D--------GLLGE----- 819 (872)
Q Consensus 755 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~-~--------~~~~~----- 819 (872)
..... ...++.+|.+||...+ ..++.++||||+||++|||+||+.||.+......... . .....
T Consensus 183 ~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 183 ADEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHH
T ss_pred cccCC-CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 43221 2235567888888765 6788999999999999999999999875432110000 0 00000
Q ss_pred ---cccccccCCCCchH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 820 ---MYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 820 ---~~~~~~~~~~~~~~----~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.............. .....+.+++.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000000000111 123467899999999999999999999875
No 250
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5e-36 Score=329.59 Aligned_cols=251 Identities=17% Similarity=0.230 Sum_probs=190.0
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCee---
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA--- 678 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~--- 678 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++...+..
T Consensus 42 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 42 KTYV--SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccEE--EEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 3455 788999999999999985 579999999997532 2356778999999999999999999999876654
Q ss_pred ---EEEEcccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccc
Q 002875 679 ---YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 755 (872)
Q Consensus 679 ---~lv~ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~ 755 (872)
|+||||++ |+|.+++....++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred eeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999997 699999988889999999999999999999999 99999999999999999999999999997654
Q ss_pred ccCCCCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc---------cccc-------
Q 002875 756 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID---------GLLG------- 818 (872)
Q Consensus 756 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~---------~~~~------- 818 (872)
..... ..++.+|.+||.... ..++.++||||+||++|||+||+.||.+.......... ....
T Consensus 196 ~~~~~-~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (371)
T 4exu_A 196 AEMTG-YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 274 (371)
T ss_dssp ----C-TTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHH
T ss_pred cCcCC-cccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhh
Confidence 33222 234556788887765 67889999999999999999999998754311100000 0000
Q ss_pred -ccccccccCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 819 -EMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 819 -~~~~~~~~~~~~~~----~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.............. ......+.+++.+||+.||++|||++|++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 275 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00000000000111 1124568899999999999999999999875
No 251
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.6e-36 Score=336.79 Aligned_cols=251 Identities=12% Similarity=0.058 Sum_probs=193.0
Q ss_pred hcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccCC-CCceeEEEEEecCCeeEEEEcc
Q 002875 607 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRH-KNLIRLLGFCYNRHQAYLLYDY 684 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~~~~~lv~ey 684 (872)
.|. ..+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+++++.++| ++|+.+..++...+..++||||
T Consensus 8 ~y~--i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 8 KFR--LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TEE--CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEE--EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 455 889999999999999985 7899999998865432 3346788999999987 5566666677778899999999
Q ss_pred cCCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee---CCCCCeeEccccccccccccC
Q 002875 685 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLAD 758 (872)
Q Consensus 685 ~~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill---~~~~~~ki~dfg~~~~~~~~~ 758 (872)
+ +|+|.+++.. ..++.+.+.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++......
T Consensus 85 ~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred C-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 9 9999999863 568999999999999999999999 99999999999999 588999999999997654322
Q ss_pred CC---------CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCC
Q 002875 759 GS---------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 829 (872)
Q Consensus 759 ~~---------~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (872)
.. ...++..|++||...+..++.++|||||||++|||+||+.||........... +..+.........
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~---~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK---YEKISEKKVATSI 237 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHH---HHHHHHHHHHSCH
T ss_pred cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHH---HHHHhhccccccH
Confidence 11 22355668888998888899999999999999999999999875432111100 0111000000000
Q ss_pred -CchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 830 -SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 830 -~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
........++.+++..||+.||++||+++++++.|+.+
T Consensus 238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 00011235688999999999999999999999998765
No 252
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.1e-35 Score=329.13 Aligned_cols=252 Identities=17% Similarity=0.191 Sum_probs=184.5
Q ss_pred cchhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCC------eeEEEEc
Q 002875 610 STECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------QAYLLYD 683 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lv~e 683 (872)
|...+.||+|+||.||+|....+..||||++..... ...+|++++++++|||||+++++|...+ ..++|||
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e 118 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE 118 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEee
Confidence 448899999999999999987777799999864322 2246899999999999999999996533 3789999
Q ss_pred ccCCCChHHHh-----hCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeC-CCCCeeEcccccccccccc
Q 002875 684 YLPNGNLSEKI-----RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 684 y~~~g~L~~~l-----~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~-~~~~~ki~dfg~~~~~~~~ 757 (872)
|++++.+.... ....++.....++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||+++.....
T Consensus 119 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 119 YVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp CCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred ccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 99875443332 23568888899999999999999999 999999999999999 7899999999999765332
Q ss_pred CCC-CcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc-cc------------ccccccc
Q 002875 758 DGS-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DG------------LLGEMYN 822 (872)
Q Consensus 758 ~~~-~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~-~~------------~~~~~~~ 822 (872)
... ...++.+|.+||...+ ..++.++||||+||++|||+||+.||.+......... .. .......
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 275 (394)
T 4e7w_A 196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYME 275 (394)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSS
T ss_pred CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhh
Confidence 222 2235566888887754 4588999999999999999999999975432110000 00 0000000
Q ss_pred ccccC-CCCchH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hccc
Q 002875 823 ENEVG-SSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGL 867 (872)
Q Consensus 823 ~~~~~-~~~~~~-----~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~--L~~~ 867 (872)
..... ...... ....++.+++.+||+.||++|||+.|++++ ++.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 276 HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp SCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred hccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 00000 000011 123568899999999999999999999976 4444
No 253
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=321.74 Aligned_cols=244 Identities=18% Similarity=0.211 Sum_probs=187.5
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhcc-CCCCceeEEEEEec------CCe
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN------RHQ 677 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~------~~~ 677 (872)
..|. ..+.||+|+||.||+|.. .+|+.||||++.......+.+.+|+.+++++ +||||+++++++.. .+.
T Consensus 24 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 24 GIFE--LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CcEE--EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 3455 889999999999999986 6899999999986666667888999999998 79999999999976 467
Q ss_pred eEEEEcccCCCChHHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccc
Q 002875 678 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 753 (872)
Q Consensus 678 ~~lv~ey~~~g~L~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~ 753 (872)
.++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 8999999999999999974 357888899999999999999999 999999999999999999999999999875
Q ss_pred ccccCC--CCcccccccCchhhhc-----ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccc-cc
Q 002875 754 TQLADG--SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE-NE 825 (872)
Q Consensus 754 ~~~~~~--~~~~~~~~~~~~e~~~-----~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~ 825 (872)
...... ....+...|.+||... ...++.++|||||||++|||+||+.||........ ....... .+
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~~ 252 (326)
T 2x7f_A 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA------LFLIPRNPAP 252 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCC
T ss_pred cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH------HHHhhcCccc
Confidence 432211 1222455677888775 45678889999999999999999999864331110 0000000 00
Q ss_pred cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 826 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 826 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
..... .....+.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 253 RLKSK---KWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp CCSCS---CSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCCcc---ccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00011 112457788999999999999999999874
No 254
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.4e-36 Score=330.52 Aligned_cols=249 Identities=18% Similarity=0.226 Sum_probs=183.0
Q ss_pred chhhhccCCCCCceeeeecCCCcEEEEEEeeccch------------hHHHHHHHHHHhhccCCCCceeEEEEEec----
Q 002875 611 TECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT------------RIKIVSEFITRIGTVRHKNLIRLLGFCYN---- 674 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~------------~~~~~~~e~~~l~~l~H~niv~l~~~~~~---- 674 (872)
...+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++|||||++++++..
T Consensus 25 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 104 (362)
T 3pg1_A 25 TVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEP 104 (362)
T ss_dssp EEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTT
T ss_pred EEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCC
Confidence 38899999999999999998899999999854211 13678899999999999999999999853
Q ss_pred -CCeeEEEEcccCCCChHHHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccc
Q 002875 675 -RHQAYLLYDYLPNGNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 750 (872)
Q Consensus 675 -~~~~~lv~ey~~~g~L~~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~ 750 (872)
....|+||||++ |+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 105 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 180 (362)
T 3pg1_A 105 AMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNL 180 (362)
T ss_dssp TCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCTTC
T ss_pred CcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEEecCc
Confidence 346899999998 6888888653 58889999999999999999999 999999999999999999999999999
Q ss_pred cccccccCC-CCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc-ccc-----------
Q 002875 751 KYLTQLADG-SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGL----------- 816 (872)
Q Consensus 751 ~~~~~~~~~-~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~-~~~----------- 816 (872)
++....... ....++.+|.+||...+ ..++.++||||+||++|||+||+.||........... ...
T Consensus 181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 260 (362)
T 3pg1_A 181 AREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM 260 (362)
T ss_dssp ---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhh
Confidence 875432222 12235566788887765 6688899999999999999999999875431110000 000
Q ss_pred -----ccccccccccC-CCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 817 -----LGEMYNENEVG-SSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 817 -----~~~~~~~~~~~-~~~~~----~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
........... ..... ......+.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 261 FSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp TSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 00000000000 00000 1123457899999999999999999999875
No 255
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=325.48 Aligned_cols=323 Identities=18% Similarity=0.136 Sum_probs=259.8
Q ss_pred CcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 20 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 20 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
-+.++.+++.++. +|..+. +++++|+|++|+|.+..+..|..+++|++|+|++|.+.+..|.+|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFVA-VPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-CCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 3578888888864 455554 5788999999998888888888999999999999988888888888899999999999
Q ss_pred CcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCC
Q 002875 100 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 179 (872)
Q Consensus 100 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p 179 (872)
|.+....+..|.++++|++|+|++|.+.+..+..+..+++|++|++++|.+.+..+..+.++++|+.|++++|.+.+..+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 98887766778888999999999998888888888888888888888888777777778888888888888888887666
Q ss_pred ccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCC
Q 002875 180 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 259 (872)
Q Consensus 180 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 259 (872)
..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.++.......+|+.|++++|+++...+..+..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 67788888888888888888777777888888888888887776666666556668888888888887655566777888
Q ss_pred cceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCC
Q 002875 260 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLED 339 (872)
Q Consensus 260 L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~ 339 (872)
|+.|++++|.+++..+..+..+++|+.|++++|.+.+. .+..|.++++|+.|++++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------------------------~~~~~~~l~~L~~L~L~~ 305 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVV------------------------EPYAFRGLNYLRVLNVSG 305 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEE------------------------CTTTBTTCTTCCEEECCS
T ss_pred cCeeECCCCcCCccChhhccccccCCEEECCCCccceE------------------------CHHHhcCcccCCEEECCC
Confidence 88888888888777777777777777777777776643 334566788899999999
Q ss_pred CccccccCccCCCCCCCcEEEcCCCcCCCC
Q 002875 340 NSFSGEIPLKFSQLPDINYIDLSRNGFTGG 369 (872)
Q Consensus 340 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 369 (872)
|++++..+..|..+++|+.|++++|.+...
T Consensus 306 N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 306 NQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp SCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred CcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 999887777888899999999999988743
No 256
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.1e-35 Score=326.47 Aligned_cols=254 Identities=17% Similarity=0.207 Sum_probs=177.0
Q ss_pred HHhhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecCCe-----
Q 002875 604 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ----- 677 (872)
Q Consensus 604 ~~~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----- 677 (872)
..+.|. ..+.||+|+||.||+|.. .+|+.||||++...........+|++.+++++|||||+++++|...+.
T Consensus 21 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 21 EMDRFQ--VERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHTTEE--EC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hccceE--EEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 344565 889999999999999986 579999999997655555566777888899999999999999975432
Q ss_pred --eEEEEcccCCCChHHHhh----C--CCCHHHHHHHHHHHHHHHHHHh--hCCCCCcccCCCCCCCeeeCC-CCCeeEc
Q 002875 678 --AYLLYDYLPNGNLSEKIR----T--KRDWAAKYKIVLGVARGLCFLH--HDCYPAIPHGDLKASNIVFDE-NMEPHLA 746 (872)
Q Consensus 678 --~~lv~ey~~~g~L~~~l~----~--~~~~~~~~~i~~~i~~gl~~lH--~~~~~~i~Hrdlk~~Nill~~-~~~~ki~ 746 (872)
.++||||+++ +|.+.+. . ..++.....++.|++.|++||| +. +|+||||||+||+++. ++.+||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~ 174 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLC 174 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEEC
T ss_pred eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEe
Confidence 7899999986 5554433 2 3477888899999999999999 76 9999999999999996 8999999
Q ss_pred cccccccccccCCC-CcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc-c--------
Q 002875 747 EFGFKYLTQLADGS-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G-------- 815 (872)
Q Consensus 747 dfg~~~~~~~~~~~-~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~-~-------- 815 (872)
|||+++........ ...++.+|.+||...+ ..++.++|||||||++|||+||+.||............ .
T Consensus 175 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 254 (360)
T 3e3p_A 175 DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE 254 (360)
T ss_dssp CCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred eCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHH
Confidence 99999765433222 2234566788887754 45889999999999999999999998754321100000 0
Q ss_pred ccc---------ccccccccC----CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 816 LLG---------EMYNENEVG----SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 816 ~~~---------~~~~~~~~~----~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
... ......... ..........++.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000 000000000 000001134578899999999999999999999875
No 257
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.5e-35 Score=347.50 Aligned_cols=243 Identities=16% Similarity=0.178 Sum_probs=189.9
Q ss_pred hhhhccCCCCCceeeeecC----CCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~----~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
..+.||+|+||.||+|... .+..||||.++... ...+.+.+|+.++++++|||||+++|++. ++..|+||||+
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcC
Confidence 7788999999999999853 35689999987532 23567889999999999999999999985 46689999999
Q ss_pred CCCChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC--
Q 002875 686 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 760 (872)
Q Consensus 686 ~~g~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~-- 760 (872)
++|+|.++++. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 473 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 549 (656)
T 2j0j_A 473 TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 549 (656)
T ss_dssp TTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCcceec
Confidence 99999999974 357889999999999999999999 9999999999999999999999999999765332211
Q ss_pred -CcccccccCchhhhcccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002875 761 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 838 (872)
Q Consensus 761 -~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (872)
...++..|++||......++.++|||||||++|||+| |..||.+..... ....+........++ .....
T Consensus 550 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~---~~~~~ 620 (656)
T 2j0j_A 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGERLPMPP---NCPPT 620 (656)
T ss_dssp ----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHHTCCCCCCT---TCCHH
T ss_pred cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHcCCCCCCCc---cccHH
Confidence 1113345788898888888999999999999999998 777776432111 111111111111111 22346
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHccc
Q 002875 839 VLDVALLCTRSTPSDRPSMEEALKLLSGL 867 (872)
Q Consensus 839 ~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~ 867 (872)
+.+++.+||+.||++|||++|+++.|+.+
T Consensus 621 l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 621 LYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 77899999999999999999999999876
No 258
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.1e-35 Score=323.47 Aligned_cols=247 Identities=17% Similarity=0.201 Sum_probs=192.5
Q ss_pred hhhhccCCCCCceeeeec--CCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCC------ceeEEEEEecCCeeEEEEc
Q 002875 612 ECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN------LIRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~--~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~~~~lv~e 683 (872)
..+.||+|+||.||+|.. .+|+.||||+++......+.+.+|++++++++|++ |+++++++.+.+..++|||
T Consensus 18 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 18 IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 889999999999999985 57899999999866556677889999999887765 9999999999999999999
Q ss_pred ccCCCChHHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC-------------------C
Q 002875 684 YLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------------------N 740 (872)
Q Consensus 684 y~~~g~L~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~-------------------~ 740 (872)
|+ +|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++. +
T Consensus 98 ~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~ 173 (339)
T 1z57_A 98 LL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN 173 (339)
T ss_dssp CC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEEEEESC
T ss_pred CC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccccccccC
Confidence 99 88999998753 46888999999999999999999 9999999999999987 6
Q ss_pred CCeeEccccccccccccCCCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc-cccc-
Q 002875 741 MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLG- 818 (872)
Q Consensus 741 ~~~ki~dfg~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~-~~~~- 818 (872)
+.+||+|||+++...... ....++..|.+||...+..++.++||||+||++|||+||..||............ ....
T Consensus 174 ~~~kl~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 252 (339)
T 1z57_A 174 PDIKVVDFGSATYDDEHH-STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGP 252 (339)
T ss_dssp CCEEECCCSSCEETTSCC-CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCS
T ss_pred CCceEeeCcccccCcccc-ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 689999999987644322 2233556688889888888899999999999999999999998754321100000 0000
Q ss_pred ------------cccccc---c-----------------cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 819 ------------EMYNEN---E-----------------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 819 ------------~~~~~~---~-----------------~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
...... + ............++.+++.+||+.||++|||++|++++
T Consensus 253 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 253 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 000000 0 00000112345678899999999999999999999865
No 259
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.1e-35 Score=326.35 Aligned_cols=251 Identities=18% Similarity=0.235 Sum_probs=190.4
Q ss_pred hcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecC-----Cee
Q 002875 607 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQA 678 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~ 678 (872)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++... ...
T Consensus 28 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 28 RYT--NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cEE--EEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 455 889999999999999985 578899999997532 2346788999999999999999999999764 368
Q ss_pred EEEEcccCCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc
Q 002875 679 YLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~ 757 (872)
|+||||++ |+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 99999997 599998875 468899999999999999999999 9999999999999999999999999999765432
Q ss_pred CC-----CCcccccccCchhhhc-ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc-cc--------cccc--
Q 002875 758 DG-----SFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL--------LGEM-- 820 (872)
Q Consensus 758 ~~-----~~~~~~~~~~~~e~~~-~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~-~~--------~~~~-- 820 (872)
.. ....++.+|.+||... ...++.++||||+||++|||+||+.||............ .. ....
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 21 1123566678888654 455889999999999999999999998754322110000 00 0000
Q ss_pred ------ccccccCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 821 ------YNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 821 ------~~~~~~~~~~~~----~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
....+....... .....++.+++.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000 1123567899999999999999999999875
No 260
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.1e-35 Score=329.64 Aligned_cols=247 Identities=19% Similarity=0.209 Sum_probs=182.2
Q ss_pred cchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCceeEEEEEecC------CeeEEEE
Q 002875 610 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------HQAYLLY 682 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~~lv~ 682 (872)
|...+.||+|+||.||+|+. .+|+.||||++.... +...+|++++++++|||||+++++|... ...++||
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 132 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence 44889999999999999997 579999999986532 2334689999999999999999998542 2467999
Q ss_pred cccCCCChHHHhh------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC-CCeeEcccccccccc
Q 002875 683 DYLPNGNLSEKIR------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQ 755 (872)
Q Consensus 683 ey~~~g~L~~~l~------~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~-~~~ki~dfg~~~~~~ 755 (872)
||+++ ++.+.+. ...++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++...
T Consensus 133 e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 133 DYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp ECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred hcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 99986 6666553 2468888999999999999999998 99999999999999965 568999999997653
Q ss_pred ccCC-CCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcc-cc--------cccccc---c
Q 002875 756 LADG-SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-ID--------GLLGEM---Y 821 (872)
Q Consensus 756 ~~~~-~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~-~~--------~~~~~~---~ 821 (872)
.... ....++.+|.+||+..+ ..++.++||||+||++|||+||+.||.+........ +. ..+..+ +
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 3222 12235667888888754 468899999999999999999999987543211000 00 000000 0
Q ss_pred cccccC--CCCchH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 822 NENEVG--SSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 822 ~~~~~~--~~~~~~-----~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.....+ ....+. ....++.+++.+||+.||++|||+.|++++
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000000 000011 123568899999999999999999999865
No 261
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=324.04 Aligned_cols=251 Identities=18% Similarity=0.227 Sum_probs=190.0
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCe----
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 677 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~---- 677 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++...+.
T Consensus 24 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 24 KTYV--SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEE--EeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 3455 788999999999999985 579999999996532 235677899999999999999999999987653
Q ss_pred --eEEEEcccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccc
Q 002875 678 --AYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 755 (872)
Q Consensus 678 --~~lv~ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~ 755 (872)
.|+||||++ |+|.+++....++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred eeEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 699999988889999999999999999999999 99999999999999999999999999987643
Q ss_pred ccCCCCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccc---------cc----------
Q 002875 756 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DG---------- 815 (872)
Q Consensus 756 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~---------~~---------- 815 (872)
.... ...++.+|.+||.... ..++.++||||+||++|||+||+.||.+......... ..
T Consensus 178 ~~~~-~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 3coi_A 178 AEMT-GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHH
T ss_pred CCcc-ccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHH
Confidence 3221 2234556788887765 6788899999999999999999999875431100000 00
Q ss_pred --cccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 816 --LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 816 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.......................+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000000000011112234568899999999999999999999865
No 262
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=316.02 Aligned_cols=242 Identities=16% Similarity=0.174 Sum_probs=185.1
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc-----hhHHHHHHHHHHhhccCCCCceeEEEEEe--cCCe
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCY--NRHQ 677 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~ 677 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++. +.+.
T Consensus 5 ~~y~--i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 5 GKYL--MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp CCBC--CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred ccee--EeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3455 889999999999999986 578999999997532 23567889999999999999999999985 4457
Q ss_pred eEEEEcccCCCChHHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccc
Q 002875 678 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 753 (872)
Q Consensus 678 ~~lv~ey~~~g~L~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~ 753 (872)
.++||||+++| +.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999976 7676643 457889999999999999999999 999999999999999999999999999875
Q ss_pred ccccCC----CCcccccccCchhhhcccC--CcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccC
Q 002875 754 TQLADG----SFPAKIAWTESGEFYNAMK--EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 827 (872)
Q Consensus 754 ~~~~~~----~~~~~~~~~~~~e~~~~~~--~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (872)
...... ....+...|.+||...+.. .+.++||||+||++|||+||+.||....... ....+.... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~i~~~~-~~ 231 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK------LFENIGKGS-YA 231 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCC-CC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH------HHHHHhcCC-CC
Confidence 432111 1122455677888776533 3678999999999999999999987432110 011111111 11
Q ss_pred CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 828 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 828 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.+. .....+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 IPG---DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCS---SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCC---ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 122456788999999999999999999975
No 263
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.1e-35 Score=323.37 Aligned_cols=242 Identities=16% Similarity=0.166 Sum_probs=183.3
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHHH-hhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
..+.||+|+||.||+|.. .+|+.||||++.... .....+..|+.+ ++.++|||||++++++.+++..|+||||+++
T Consensus 55 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 134 (340)
T 3an0_A 55 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134 (340)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE
T ss_pred EeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC
Confidence 778899999999999985 689999999997532 223344444444 7889999999999999999999999999985
Q ss_pred CChHHHhhC------CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-C
Q 002875 688 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-S 760 (872)
Q Consensus 688 g~L~~~l~~------~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~-~ 760 (872)
+|.+++.. ..++.....++.|+++||+|||+.+ +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 135 -~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 211 (340)
T 3an0_A 135 -SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT 211 (340)
T ss_dssp -EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHH
T ss_pred -cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecccccccc
Confidence 99888753 4688899999999999999999732 899999999999999999999999999865432111 1
Q ss_pred CcccccccCchhhhc----ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 761 FPAKIAWTESGEFYN----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~----~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
...++..|.+||... ...++.++|||||||++|||+||+.||........ .+............ .....
T Consensus 212 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~ 284 (340)
T 3an0_A 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-----QLKQVVEEPSPQLP--ADKFS 284 (340)
T ss_dssp HSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-----HHHHHHHSCCCCCC--GGGSC
T ss_pred cCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH-----HHHHHhcCCCCCCC--cccCC
Confidence 122445577888753 34678899999999999999999999874321110 01111111101001 11223
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 837 KLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.++.+++.+||+.||++|||++|++++
T Consensus 285 ~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 285 AEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 567889999999999999999999864
No 264
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.8e-35 Score=330.11 Aligned_cols=241 Identities=18% Similarity=0.184 Sum_probs=180.2
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEEcccCCCCh
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 690 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~g~L 690 (872)
..+.||+|+||.||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+++..|+|||||. |+|
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 56789999999998777778999999998743 245677899999876 89999999999999999999999996 699
Q ss_pred HHHhhCCCC---------HHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC-------------CCeeEccc
Q 002875 691 SEKIRTKRD---------WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-------------MEPHLAEF 748 (872)
Q Consensus 691 ~~~l~~~~~---------~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~-------------~~~ki~df 748 (872)
.+++..... +...+.++.||+.||+|||+. +|+||||||+||+++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 999976432 112367999999999999999 99999999999999654 47999999
Q ss_pred cccccccccCCC------CcccccccCchhhhcc-------cCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCcccc
Q 002875 749 GFKYLTQLADGS------FPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPID 814 (872)
Q Consensus 749 g~~~~~~~~~~~------~~~~~~~~~~~e~~~~-------~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~ 814 (872)
|+++........ ...++..|.+||+..+ ..++.++||||+||++|||+| |..||.+..... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~----~ 248 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE----S 248 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH----H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH----H
Confidence 999765432211 1235566788888754 567889999999999999999 777775432111 0
Q ss_pred ccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 815 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
............. .........++.+++.+||+.||++|||++|++++
T Consensus 249 ~i~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 249 NIIRGIFSLDEMK-CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HHHHTCCCCCCCT-TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHhcCCCCccccc-ccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 0111111111010 11123455678899999999999999999999864
No 265
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.1e-35 Score=314.88 Aligned_cols=232 Identities=16% Similarity=0.200 Sum_probs=175.3
Q ss_pred hhhHHhhcCcchh-hhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHh-hccCCCCceeEEEEEec---
Q 002875 601 ANDVLRSFNSTEC-EEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRI-GTVRHKNLIRLLGFCYN--- 674 (872)
Q Consensus 601 ~~~~~~~~~~~~~-~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~--- 674 (872)
..++...|. .. +.+|+|+||.||+|.. .+|+.||||+++.. ..+.+|++++ +..+||||+++++++..
T Consensus 12 ~~~~~~~y~--~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 85 (299)
T 3m2w_A 12 KNAIIDDYK--VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYA 85 (299)
T ss_dssp CSCGGGTEE--EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred ccccccchh--hcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcC
Confidence 344555554 54 6799999999999986 67999999999742 3466777777 55689999999999876
Q ss_pred -CCeeEEEEcccCCCChHHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC---CCCeeEc
Q 002875 675 -RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLA 746 (872)
Q Consensus 675 -~~~~~lv~ey~~~g~L~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~---~~~~ki~ 746 (872)
.+..++||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 6789999999999999999975 357889999999999999999999 9999999999999998 7889999
Q ss_pred cccccccccccCCCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccccccc
Q 002875 747 EFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 826 (872)
Q Consensus 747 dfg~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (872)
|||++.... ...++.++||||+||++|||+||+.||.......... ............
T Consensus 163 Dfg~a~~~~--------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~--~~~~~~~~~~~~ 220 (299)
T 3m2w_A 163 DFGFAKETT--------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GMKTRIRMGQYE 220 (299)
T ss_dssp CCTTCEECT--------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C--CSCCSSCTTCCS
T ss_pred ccccccccc--------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH--HHHHHHhhcccc
Confidence 999985422 1234567899999999999999999987543221100 000011100000
Q ss_pred CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 827 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 827 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
...+.......++.+++.+||+.||++|||++|++++
T Consensus 221 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 221 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000011234568899999999999999999999875
No 266
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.5e-35 Score=327.42 Aligned_cols=195 Identities=18% Similarity=0.174 Sum_probs=163.0
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccC-CC-----CceeEEEEEecCCee
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HK-----NLIRLLGFCYNRHQA 678 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~~~~~~~~~~ 678 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+..|+.+++.++ |+ +||++++++...+..
T Consensus 54 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 54 DRYE--IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeEE--EEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 4455 889999999999999985 57889999999866555667778888888775 44 499999999999999
Q ss_pred EEEEcccCCCChHHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeC--CCCCeeEccccccc
Q 002875 679 YLLYDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENMEPHLAEFGFKY 752 (872)
Q Consensus 679 ~lv~ey~~~g~L~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~--~~~~~ki~dfg~~~ 752 (872)
|+||||++ |+|.+++... .++.....++.|++.||+|||++ ..+|+||||||+||+++ .++.+||+|||+++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 99999996 5999998753 58899999999999999999952 23899999999999994 57789999999997
Q ss_pred cccccCCCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCC
Q 002875 753 LTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 805 (872)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~ 805 (872)
....... ...++.+|.+||+..+..++.++|||||||++|||+||+.||...
T Consensus 210 ~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 210 QLGQRIY-QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp ETTCCCC-SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecccccc-cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6543222 223556688899988888999999999999999999999998754
No 267
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=9.8e-36 Score=325.80 Aligned_cols=252 Identities=19% Similarity=0.211 Sum_probs=189.0
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecC-----Ce
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQ 677 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 677 (872)
+.|. ..+.+|+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++||||+++++++... ..
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 11 SDFQ--LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cceE--EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3455 889999999999999986 579999999997432 2355678899999999999999999998754 67
Q ss_pred eEEEEcccCCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccc
Q 002875 678 AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 756 (872)
Q Consensus 678 ~~lv~ey~~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~ 756 (872)
.|+||||++ |+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 899999997 699998875 468899999999999999999999 999999999999999999999999999875432
Q ss_pred cCC------------CCcccccccCchhhhc-ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcc-----------
Q 002875 757 ADG------------SFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP----------- 812 (872)
Q Consensus 757 ~~~------------~~~~~~~~~~~~e~~~-~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~----------- 812 (872)
... ....++.+|.+||... ...++.++||||+||++|||+||+.||..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 111 0112455677888654 4678889999999999999999999987543110000
Q ss_pred ---c----cccccccccccccCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 813 ---I----DGLLGEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 813 ---~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
. .....+.....+....... .....++.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 0000000000000000000 1223567899999999999999999999875
No 268
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=318.73 Aligned_cols=248 Identities=19% Similarity=0.244 Sum_probs=180.3
Q ss_pred hhhhccCCCCCceeeeecC-CCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCCCceeEEEEEe--------------cC
Q 002875 612 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCY--------------NR 675 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~--------------~~ 675 (872)
..+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++++++|||||++++++. +.
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccccc
Confidence 8899999999999999964 59999999987543 34567889999999999999999999884 34
Q ss_pred CeeEEEEcccCCCChHHHhhC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeC-CCCCeeEcccccccc
Q 002875 676 HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYL 753 (872)
Q Consensus 676 ~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~-~~~~~ki~dfg~~~~ 753 (872)
+..|+||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++ +++.+||+|||+++.
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~ 170 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARI 170 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCCTTCBC
T ss_pred CceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccCccccc
Confidence 67899999998 699999976 457888899999999999999999 999999999999997 567899999999876
Q ss_pred ccccC-----CCCcccccccCchhhhcc-cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc-ccc--------c
Q 002875 754 TQLAD-----GSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLL--------G 818 (872)
Q Consensus 754 ~~~~~-----~~~~~~~~~~~~~e~~~~-~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~-~~~--------~ 818 (872)
..... .....+..+|.+||.... ..++.++|||||||++|||+||+.||............ ... .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (320)
T 2i6l_A 171 MDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQ 250 (320)
T ss_dssp C--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHH
T ss_pred cCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhh
Confidence 43211 111123455777786644 67888999999999999999999998754321100000 000 0
Q ss_pred cc-------ccccccCCCCch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 819 EM-------YNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 819 ~~-------~~~~~~~~~~~~----~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
+. ............ .....++.+++.+||+.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 251 ELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00 000000000000 1124568899999999999999999999864
No 269
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.8e-33 Score=319.35 Aligned_cols=347 Identities=24% Similarity=0.327 Sum_probs=284.3
Q ss_pred cCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcE
Q 002875 39 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 118 (872)
Q Consensus 39 ~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 118 (872)
..+++|+.|++++|.+.. +| .+..+++|++||+++|.+.+..| +.++++|++|++++|.+.+..+ |+++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 457899999999999875 45 48899999999999999986544 9999999999999999987554 999999999
Q ss_pred eeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCC
Q 002875 119 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 198 (872)
Q Consensus 119 L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l 198 (872)
|++++|.+++..+ +..+++|++|++++|.+.+ ++ .+.++++|+.|+++ +.+.+.. .+..+++|+.|++++|.+
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKV 189 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcC
Confidence 9999999987543 8899999999999988765 33 47888899999986 4454332 378888899999998888
Q ss_pred cccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccC
Q 002875 199 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 278 (872)
Q Consensus 199 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~ 278 (872)
.+. ..+..+++|++|++++|.+++..| ++.+++|+.|++++|.+.+. ..+..+++|+.|++++|.+.+..+ +
T Consensus 190 ~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 261 (466)
T 1o6v_A 190 SDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--L 261 (466)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred CCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--h
Confidence 754 347888888999998888876544 67788888888888888753 357778888888888888876544 6
Q ss_pred CCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcE
Q 002875 279 GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINY 358 (872)
Q Consensus 279 ~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 358 (872)
..+++|+.|++++|.+.+ ..+ +..+++|+.|++++|++++..+ +..+++|+.
T Consensus 262 ~~l~~L~~L~l~~n~l~~------------------------~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 313 (466)
T 1o6v_A 262 SGLTKLTELKLGANQISN------------------------ISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTY 313 (466)
T ss_dssp TTCTTCSEEECCSSCCCC------------------------CGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSE
T ss_pred hcCCCCCEEECCCCccCc------------------------ccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCE
Confidence 677777888777776652 111 5678999999999999997655 788999999
Q ss_pred EEcCCCcCCCCCCchhhhhcccccccccCCCCCCCcCCcccCCCcccccccccccccCCCCCCCCcCCccceeecccccc
Q 002875 359 IDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNL 438 (872)
Q Consensus 359 L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~l~~l~l~~n~l 438 (872)
|++++|++.+..| +..+++|++|++++|+. .+. ..+..+++|+.|++++|.+++..| +..+++|+.++++.|.+
T Consensus 314 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l-~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 314 LTLYFNNISDISP--VSSLTKLQRLFFYNNKV-SDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAW 387 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCCEEECCSSCC-CCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEE
T ss_pred EECcCCcCCCchh--hccCccCCEeECCCCcc-CCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcc
Confidence 9999999998765 77899999999999954 333 367789999999999999988776 88899999999999999
Q ss_pred CC
Q 002875 439 SG 440 (872)
Q Consensus 439 ~~ 440 (872)
++
T Consensus 388 ~~ 389 (466)
T 1o6v_A 388 TN 389 (466)
T ss_dssp EC
T ss_pred cC
Confidence 87
No 270
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.2e-35 Score=317.91 Aligned_cols=251 Identities=20% Similarity=0.265 Sum_probs=187.1
Q ss_pred hcCcchhhhccCCCCCceeeeec--CCCcEEEEEEeeccch---hHHHHHHHHHHhhcc---CCCCceeEEEEEe-----
Q 002875 607 SFNSTECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGAT---RIKIVSEFITRIGTV---RHKNLIRLLGFCY----- 673 (872)
Q Consensus 607 ~~~~~~~~~~g~g~~~~v~~~~~--~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l---~H~niv~l~~~~~----- 673 (872)
.|. ..+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+++++ +||||++++++|.
T Consensus 12 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 12 QYE--CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp TEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred cee--eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 355 889999999999999986 5789999999865322 223456677776665 8999999999997
Q ss_pred cCCeeEEEEcccCCCChHHHhhCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccc
Q 002875 674 NRHQAYLLYDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 749 (872)
Q Consensus 674 ~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg 749 (872)
.....++||||++ |+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCc
Confidence 5567899999998 6999998652 57889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccCC-CCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCC---------------ccc
Q 002875 750 FKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPI 813 (872)
Q Consensus 750 ~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~---------------~~~ 813 (872)
+++....... ....+...|.+||......++.++||||+||++|||+||+.||........ +..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (326)
T 1blx_A 166 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245 (326)
T ss_dssp SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred ccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcc
Confidence 9875432211 122245567888988877889999999999999999999999875432110 000
Q ss_pred cccc-ccccccccc-CCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 814 DGLL-GEMYNENEV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 814 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.... ......... ............+.+++.+||+.||++|||++|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 000000000 0000011223467789999999999999999999965
No 271
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=322.91 Aligned_cols=321 Identities=20% Similarity=0.188 Sum_probs=277.3
Q ss_pred CCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCcc
Q 002875 44 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 123 (872)
Q Consensus 44 L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 123 (872)
-+.++.+++.+.. +|..+ .+++++|||++|.+++..|..|.++++|++|+|++|.+.+..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~~-ip~~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFVA-VPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCSS-CCSCC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-CCCCC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 4678888888874 56554 36899999999999988888999999999999999999998899999999999999999
Q ss_pred CcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCC
Q 002875 124 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP 203 (872)
Q Consensus 124 n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 203 (872)
|.++...+..|..+++|++|++++|.+.+..|..+.++++|++|++++|.+.+..+..|..+++|+.|++++|.+++..+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 99988777778999999999999999888888888899999999999999988888888889999999999999887777
Q ss_pred cccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCC
Q 002875 204 WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSK 283 (872)
Q Consensus 204 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~ 283 (872)
..|..+++|+.|++++|.+.+..+..|..+++|+.|++++|...+.+|.......+|+.|++++|.+++..+..+..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 77888899999999999988877788888899999999988877777766666678888888888888654456777888
Q ss_pred CcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCC
Q 002875 284 LRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSR 363 (872)
Q Consensus 284 L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 363 (872)
|+.|++++|.+.+. .+..|..+++|+.|++++|++++..+..|..+++|+.|++++
T Consensus 250 L~~L~Ls~n~l~~~------------------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (477)
T 2id5_A 250 LRFLNLSYNPISTI------------------------EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 305 (477)
T ss_dssp CCEEECCSSCCCEE------------------------CTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCS
T ss_pred cCeeECCCCcCCcc------------------------ChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCC
Confidence 88888888877632 233567789999999999999999999999999999999999
Q ss_pred CcCCCCCCchhhhhcccccccccCCCCC
Q 002875 364 NGFTGGIPTDINQASKLEYFNVSNNPKL 391 (872)
Q Consensus 364 N~l~~~~~~~~~~l~~L~~L~ls~n~~l 391 (872)
|++++..+..|..+++|++|++++|+..
T Consensus 306 N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 306 NQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp SCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred CcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 9999887778889999999999999753
No 272
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=318.81 Aligned_cols=246 Identities=17% Similarity=0.248 Sum_probs=185.5
Q ss_pred chhhhccCCCCCceeeeecCCCcEEEEEEeeccc---hhHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 611 TECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
...+.||+|+||.||+|.... .||||+++... ...+.+.+|+.++++++||||+++++++.+++..++||||+++
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~ 113 (319)
T 2y4i_B 36 EIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKG 113 (319)
T ss_dssp ECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCS
T ss_pred EEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccC
Confidence 388999999999999998743 59999987532 2345677899999999999999999999999999999999999
Q ss_pred CChHHHhhCC---CCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccccccccc-------
Q 002875 688 GNLSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA------- 757 (872)
Q Consensus 688 g~L~~~l~~~---~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~------- 757 (872)
|+|.+++... .++.+...++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 114 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~ 189 (319)
T 2y4i_B 114 RTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRED 189 (319)
T ss_dssp EEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----------CC
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccccccc
Confidence 9999999763 57889999999999999999999 999999999999998 679999999997653211
Q ss_pred CCCCcccccccCchhhhcc---------cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCC
Q 002875 758 DGSFPAKIAWTESGEFYNA---------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 828 (872)
Q Consensus 758 ~~~~~~~~~~~~~~e~~~~---------~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (872)
......++..|.+||.... ..++.++|||||||++|||+||+.||....... ..........+...
T Consensus 190 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~~-- 264 (319)
T 2y4i_B 190 KLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA---IIWQMGTGMKPNLS-- 264 (319)
T ss_dssp SCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH---HHHHHHTTCCCCCC--
T ss_pred ccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHhccCCCCCCC--
Confidence 1111224555778887653 346788999999999999999999986432111 00000000001000
Q ss_pred CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHcccCCC
Q 002875 829 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 870 (872)
Q Consensus 829 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~L~~~~~~ 870 (872)
.. ....++.+++.+||+.||++|||++|+++.|+.+...
T Consensus 265 ~~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 265 QI---GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp CS---SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred cC---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 00 1123477889999999999999999999999988654
No 273
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.8e-35 Score=318.42 Aligned_cols=244 Identities=18% Similarity=0.198 Sum_probs=169.5
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccc--hhHHHHHHHHH-HhhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFIT-RIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
..+.||+|+||.||+|.. .+|+.||||++.... .....+..|+. +++.++||||+++++++.+++..++||||+++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~ 105 (327)
T 3aln_A 26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105 (327)
T ss_dssp C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred ehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence 788999999999999986 579999999997542 22334444444 77888999999999999999999999999985
Q ss_pred CChHHHhh-------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC
Q 002875 688 GNLSEKIR-------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 760 (872)
Q Consensus 688 g~L~~~l~-------~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~ 760 (872)
+|.+++. ...++.....++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++........
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 8887764 24578889999999999999999842 8999999999999999999999999998764332211
Q ss_pred -CcccccccCchhhh----cccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCC-CCchHH
Q 002875 761 -FPAKIAWTESGEFY----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS-SSSLQD 834 (872)
Q Consensus 761 -~~~~~~~~~~~e~~----~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 834 (872)
...++..|.+||.. ....++.++|||||||++|||+||+.||......... ............ ......
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-----LTQVVKGDPPQLSNSEERE 257 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCSCCCCCCCCSSCC
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH-----HHHHhcCCCCCCCCccccc
Confidence 12345567788877 3456788999999999999999999998753321111 111111110000 000111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 835 EIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 835 ~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
....+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 258 FSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 23467789999999999999999999753
No 274
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.8e-36 Score=321.73 Aligned_cols=233 Identities=16% Similarity=0.133 Sum_probs=186.8
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch-------hHHHHHHHHHHhhccC--CCCceeEEEEEecCCeeEEE
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVR--HKNLIRLLGFCYNRHQAYLL 681 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv 681 (872)
..+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+.++++++ ||||+++++++.+++..++|
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv 126 (320)
T 3a99_A 47 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 126 (320)
T ss_dssp EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEE
Confidence 889999999999999984 6799999999975422 2245667899999996 59999999999999999999
Q ss_pred EcccCC-CChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeC-CCCCeeEcccccccccccc
Q 002875 682 YDYLPN-GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLA 757 (872)
Q Consensus 682 ~ey~~~-g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~-~~~~~ki~dfg~~~~~~~~ 757 (872)
|||+.+ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++ +++.+||+|||+++.....
T Consensus 127 ~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~ 203 (320)
T 3a99_A 127 LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 203 (320)
T ss_dssp EECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCSS
T ss_pred EEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccccccccc
Confidence 999986 899999875 467888999999999999999999 999999999999999 7889999999998765433
Q ss_pred CCCCcccccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 758 DGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 758 ~~~~~~~~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
......++..|.+||......+ +.++|||||||++|||+||+.||...... .... ...... ..
T Consensus 204 ~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------------~~~~-~~~~~~---~~ 267 (320)
T 3a99_A 204 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------------IRGQ-VFFRQR---VS 267 (320)
T ss_dssp CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------HHCC-CCCSSC---CC
T ss_pred cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh------------hccc-cccccc---CC
Confidence 3222335566788887765554 67889999999999999999998642110 0000 000111 12
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 837 KLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.++.+++.+||+.||++|||++|++++
T Consensus 268 ~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 268 SECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 457789999999999999999999875
No 275
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.3e-35 Score=313.03 Aligned_cols=240 Identities=16% Similarity=0.146 Sum_probs=184.5
Q ss_pred chhhhccCCCCCceeeeecCCCcEEEEEEeeccc---hhHHHHHHHHHHhhccC--CCCceeEEEEEecCCeeEEEEccc
Q 002875 611 TECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNRHQAYLLYDYL 685 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ey~ 685 (872)
...+.||+|+||.||+|...+|+.||||++.... ...+.+.+|++++++++ ||||+++++++.+++..|+||| +
T Consensus 31 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~ 109 (313)
T 3cek_A 31 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-C 109 (313)
T ss_dssp EEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-C
T ss_pred EEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-c
Confidence 3889999999999999999889999999996532 34567889999999997 4999999999999999999999 5
Q ss_pred CCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC---
Q 002875 686 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--- 760 (872)
Q Consensus 686 ~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~--- 760 (872)
.+|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+++........
T Consensus 110 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~ 185 (313)
T 3cek_A 110 GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVK 185 (313)
T ss_dssp CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC----------
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCccccccc
Confidence 67899999975 357888999999999999999999 9999999999999974 88999999998764332211
Q ss_pred -CcccccccCchhhhcc-----------cCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccccccccc-C
Q 002875 761 -FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV-G 827 (872)
Q Consensus 761 -~~~~~~~~~~~e~~~~-----------~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~ 827 (872)
...+...|.+||.... ..++.++|||||||++|||+||+.||........ ......++... .
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~ 260 (313)
T 3cek_A 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-----KLHAIIDPNHEIE 260 (313)
T ss_dssp ----CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-----HHHHHHCTTSCCC
T ss_pred cCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH-----HHHHHHhcccccC
Confidence 1224556778887754 3677889999999999999999999864322110 01111111100 0
Q ss_pred CCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 828 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 828 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.+... ..++.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 261 FPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Ccccc---hHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 01111 2457788999999999999999999865
No 276
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=328.39 Aligned_cols=241 Identities=17% Similarity=0.170 Sum_probs=176.3
Q ss_pred cchhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 610 STECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
+...+.||+|+||.||.....+|+.||||++..... +.+.+|+++++++ +|||||++++++.+.+..|+|||||+ |
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g 102 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-A 102 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence 447889999999997655567899999999964322 2356789999998 79999999999999999999999996 6
Q ss_pred ChHHHhhCCC---CHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCC-----CCCeeEccccccccccccC--
Q 002875 689 NLSEKIRTKR---DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-----NMEPHLAEFGFKYLTQLAD-- 758 (872)
Q Consensus 689 ~L~~~l~~~~---~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~-----~~~~ki~dfg~~~~~~~~~-- 758 (872)
+|.+++.... .+.+...++.|+++||+|||+. +|+||||||+||+++. ...+||+|||+++......
T Consensus 103 ~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~ 179 (432)
T 3p23_A 103 TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179 (432)
T ss_dssp EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------
T ss_pred CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc
Confidence 9999997632 3445678999999999999999 9999999999999943 3468899999997654321
Q ss_pred ---CCCcccccccCchhhhc---ccCCcccccchhHHHHHHHHHc-CCCCCCCCCCCCCccccccccccccccccCCCCc
Q 002875 759 ---GSFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 831 (872)
Q Consensus 759 ---~~~~~~~~~~~~~e~~~---~~~~~~~~Dv~S~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (872)
.....++.+|.+||+.. ...++.++||||+||++|||+| |..||........ ....... ... ....
T Consensus 180 ~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~---~~~~~~~-~~~---~~~~ 252 (432)
T 3p23_A 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA---NILLGAC-SLD---CLHP 252 (432)
T ss_dssp ------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH---HHHTTCC-CCT---TSCT
T ss_pred eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH---HHHhccC-Ccc---ccCc
Confidence 11123566688888876 4556778999999999999999 6666643221110 0000000 000 0011
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 832 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 832 ~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.......+.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 253 EKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 11233457789999999999999999999854
No 277
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.4e-35 Score=324.23 Aligned_cols=250 Identities=15% Similarity=0.144 Sum_probs=189.8
Q ss_pred cchhhhccCCCCCceeeeec-CCCcEEEEEEeeccchhHHHHHHHHHHhhccC-----------CCCceeEEEEEecCC-
Q 002875 610 STECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----------HKNLIRLLGFCYNRH- 676 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~~~~~~~~- 676 (872)
|...+.||+|+||.||+|.. .+|+.||||++.......+.+.+|+.++++++ ||||+++++++...+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 100 (373)
T 1q8y_A 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP 100 (373)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET
T ss_pred EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCC
Confidence 33889999999999999985 68999999999866666777888999998886 899999999998654
Q ss_pred ---eeEEEEcccCCCChHHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeC------CCCCe
Q 002875 677 ---QAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD------ENMEP 743 (872)
Q Consensus 677 ---~~~lv~ey~~~g~L~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~------~~~~~ 743 (872)
..++||||+ +|+|.+++.. ..++.....++.|++.||+|||+.+ +|+||||||+||+++ ..+.+
T Consensus 101 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~~~ 177 (373)
T 1q8y_A 101 NGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQI 177 (373)
T ss_dssp TEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred CCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcceE
Confidence 789999999 8899999864 3678889999999999999999853 899999999999994 44579
Q ss_pred eEccccccccccccCCCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccccccccc---
Q 002875 744 HLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEM--- 820 (872)
Q Consensus 744 ki~dfg~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 820 (872)
||+|||+++....... ...++..|.+||...+..++.++||||+||++|||+||+.||................++
T Consensus 178 kl~Dfg~a~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (373)
T 1q8y_A 178 KIADLGNACWYDEHYT-NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256 (373)
T ss_dssp EECCCTTCEETTBCCC-SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred EEcccccccccCCCCC-CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence 9999999976543322 223556688889888888899999999999999999999998744321100000000000
Q ss_pred ----------------------------ccccc-------cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 821 ----------------------------YNENE-------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 821 ----------------------------~~~~~-------~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
..... ............++.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 00000 00011123456678899999999999999999999875
No 278
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.1e-35 Score=336.31 Aligned_cols=250 Identities=14% Similarity=0.089 Sum_probs=187.5
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeecc--chhHHHHHHHHHHhhccCCCCceeEEEEEec------CC
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN------RH 676 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~ 676 (872)
..|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++.. .+
T Consensus 14 grY~--i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 14 GPWE--MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ---C--CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCeE--EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 4566 889999999999999986 67999999998753 2345678899999999999999999999865 67
Q ss_pred eeEEEEcccCCCChHHHhhC-----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC---eeEccc
Q 002875 677 QAYLLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEF 748 (872)
Q Consensus 677 ~~~lv~ey~~~g~L~~~l~~-----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~---~ki~df 748 (872)
..++|||||++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 78999999999999999976 356788899999999999999999 9999999999999997665 999999
Q ss_pred cccccccccCCC-CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCc------------cccc
Q 002875 749 GFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK------------PIDG 815 (872)
Q Consensus 749 g~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~------------~~~~ 815 (872)
|++......... ...++..|.+||...+..++.++||||+||++|||+||..||........+ ....
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 999765433221 223455678889888888899999999999999999999998653211100 0000
Q ss_pred cc-cccccccccCC-CCchHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 002875 816 LL-GEMYNENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 860 (872)
Q Consensus 816 ~~-~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v 860 (872)
.. .........+. ..........+.+++..||..||++|||++|+
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 00 00000000111 11123345678899999999999999999774
No 279
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=313.35 Aligned_cols=242 Identities=15% Similarity=0.161 Sum_probs=170.1
Q ss_pred hhhhccCCCCCceeeeec-CCCcEEEEEEeeccch---hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.++..+++.++||||+++++++.+++..++||||+ +
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 107 (318)
T 2dyl_A 29 NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-G 107 (318)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred ccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-C
Confidence 788999999999999986 4799999999975432 2344555566788899999999999999999999999999 4
Q ss_pred CChHHHhh---CCCCHHHHHHHHHHHHHHHHHHhh-CCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC-CCc
Q 002875 688 GNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFP 762 (872)
Q Consensus 688 g~L~~~l~---~~~~~~~~~~i~~~i~~gl~~lH~-~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~-~~~ 762 (872)
+.+..... ...++.....++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||++........ ...
T Consensus 108 ~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (318)
T 2dyl_A 108 TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS 184 (318)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC------------
T ss_pred CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcccccc
Confidence 55555543 356888899999999999999998 5 899999999999999999999999999865433221 122
Q ss_pred ccccccCchhhhc-----ccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002875 763 AKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 837 (872)
Q Consensus 763 ~~~~~~~~~e~~~-----~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (872)
.+...|.+||... ...++.++|||||||++|||+||+.||........ ............ .+.......
T Consensus 185 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~ 258 (318)
T 2dyl_A 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE-----VLTKVLQEEPPL-LPGHMGFSG 258 (318)
T ss_dssp --CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-----HHHHHHHSCCCC-CCSSSCCCH
T ss_pred CCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH-----HHHHHhccCCCC-CCccCCCCH
Confidence 2445577888773 45678889999999999999999999875322110 011111111000 010011224
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 838 LVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 838 ~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
++.+++.+||+.||++|||++|++++
T Consensus 259 ~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 259 DFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHHHccCChhHCcCHHHHhhC
Confidence 57788999999999999999999864
No 280
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=318.24 Aligned_cols=237 Identities=16% Similarity=0.156 Sum_probs=182.7
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCCcEEEEEEeeccch-------hHHHHHHHHHHhhcc----CCCCceeEEEEEe
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTV----RHKNLIRLLGFCY 673 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l----~H~niv~l~~~~~ 673 (872)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+++++ +||||+++++++.
T Consensus 31 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 31 AEYR--LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp --CE--EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hceE--EeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 4455 889999999999999985 6789999999965422 223455788888888 8999999999999
Q ss_pred cCCeeEEEEcc-cCCCChHHHhhC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeC-CCCCeeEcccc
Q 002875 674 NRHQAYLLYDY-LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFG 749 (872)
Q Consensus 674 ~~~~~~lv~ey-~~~g~L~~~l~~--~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~-~~~~~ki~dfg 749 (872)
+.+..++|||| +++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred cCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 99999999999 789999999975 468899999999999999999999 999999999999999 88999999999
Q ss_pred ccccccccCCCCcccccccCchhhhcccCC-cccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCC
Q 002875 750 FKYLTQLADGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 828 (872)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (872)
+++...........+...|.+||......+ +.++||||+||++|||+||+.||..... ..... ...
T Consensus 186 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------~~~~~-~~~ 252 (312)
T 2iwi_A 186 SGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------------ILEAE-LHF 252 (312)
T ss_dssp SCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------------HHHTC-CCC
T ss_pred hhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------------Hhhhc-cCC
Confidence 987654433233335556778887765544 4589999999999999999999863211 00000 000
Q ss_pred CCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002875 829 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 863 (872)
Q Consensus 829 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~~ 863 (872)
.. .....+.+++.+||+.||++|||++|++++
T Consensus 253 ~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 253 PA---HVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp CT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred cc---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 122457789999999999999999999975
No 281
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=9.5e-35 Score=318.33 Aligned_cols=251 Identities=16% Similarity=0.168 Sum_probs=191.0
Q ss_pred hhcCcchhhhccCCCCCceeeeec-CCC-cEEEEEEeeccchhHHHHHHHHHHhhccCCCC------ceeEEEEEecCCe
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVL-PTG-ITVSVKKIEWGATRIKIVSEFITRIGTVRHKN------LIRLLGFCYNRHQ 677 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~-~~g-~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~~ 677 (872)
+.|. ..+.||+|+||.||+|.. .+| +.||||+++......+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 19 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 19 ERYE--IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ccEE--EEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 3455 889999999999999985 344 78999999866566777888999999998776 9999999999999
Q ss_pred eEEEEcccCCCChHHHhhC----CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeee----------------
Q 002875 678 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---------------- 737 (872)
Q Consensus 678 ~~lv~ey~~~g~L~~~l~~----~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill---------------- 737 (872)
.++||||+ +|++.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 5677777653 357889999999999999999999 99999999999999
Q ss_pred ---CCCCCeeEccccccccccccCCCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCcccc
Q 002875 738 ---DENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID 814 (872)
Q Consensus 738 ---~~~~~~ki~dfg~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~ 814 (872)
+.++.+||+|||+++....... ...++..|.+||...+..++.++||||+||++|||+||+.||............
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHHT-TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCC-SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred ccccCCCcEEEeecCcccccccccc-CCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 5678999999999976443322 223556688889888888899999999999999999999998754321100000
Q ss_pred -ccccc-------------c-ccccc-------------------cCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 002875 815 -GLLGE-------------M-YNENE-------------------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 860 (872)
Q Consensus 815 -~~~~~-------------~-~~~~~-------------------~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v 860 (872)
..... . ..... ............++.+++.+||+.||++|||++|+
T Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 331 (355)
T 2eu9_A 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331 (355)
T ss_dssp HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence 00000 0 00000 00000011234578899999999999999999999
Q ss_pred HHH
Q 002875 861 LKL 863 (872)
Q Consensus 861 ~~~ 863 (872)
+++
T Consensus 332 l~h 334 (355)
T 2eu9_A 332 LLH 334 (355)
T ss_dssp TTS
T ss_pred hcC
Confidence 854
No 282
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-32 Score=304.59 Aligned_cols=309 Identities=17% Similarity=0.122 Sum_probs=149.7
Q ss_pred CCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEee
Q 002875 41 LTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLH 120 (872)
Q Consensus 41 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 120 (872)
++++++|++++|.+....+..|..+++|++|++++|.+.+..+..|..+++|++|+|++|.+.+..|..|+++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 34444444444444433333344444444444444444444444444444444444444444444444444444444444
Q ss_pred CccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcc
Q 002875 121 LAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG 200 (872)
Q Consensus 121 L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 200 (872)
|++|.++...+..++.+++|++|++++|.+.+..|..+.++++|++|++++|.+.+. .+..+++|+.|++++|.+.+
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 444444433333344444444444444444444444445555555555555555432 13344555555555555542
Q ss_pred cCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCC
Q 002875 201 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 280 (872)
Q Consensus 201 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~ 280 (872)
+...++|++|++++|.+... |. ...++|+.|++++|.+.+. ..+..+++|++|++++|.+.+..|..+..
T Consensus 201 -----~~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (390)
T 3o6n_A 201 -----LAIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVK 270 (390)
T ss_dssp -----EECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----cCCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccc
Confidence 22234555666666655533 21 1234566666666665542 34555666666666666666555666666
Q ss_pred CCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEE
Q 002875 281 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYID 360 (872)
Q Consensus 281 ~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 360 (872)
+++|+.|++++|.+.+ +|..+...+.|+.|++++|++. .+|..+..+++|+.|++++|+++.. .+..+++|+.|+
T Consensus 271 l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~---~~~~~~~L~~L~ 345 (390)
T 3o6n_A 271 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL---KLSTHHTLKNLT 345 (390)
T ss_dssp CSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC---CCCTTCCCSEEE
T ss_pred cccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee---CchhhccCCEEE
Confidence 6666666666665542 2222222223333333333332 1222334455566666666655533 144455555555
Q ss_pred cCCCcCC
Q 002875 361 LSRNGFT 367 (872)
Q Consensus 361 Ls~N~l~ 367 (872)
+++|.+.
T Consensus 346 l~~N~~~ 352 (390)
T 3o6n_A 346 LSHNDWD 352 (390)
T ss_dssp CCSSCEE
T ss_pred cCCCCcc
Confidence 5555544
No 283
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.5e-34 Score=337.50 Aligned_cols=236 Identities=15% Similarity=0.168 Sum_probs=184.5
Q ss_pred hhcCcchhhhccCCCCCceeeeecC--CCcEEEEEEeeccc--hhHHHHHHHHHHhhccCCCCceeEEEEEecCCe----
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVLP--TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 677 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~~--~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~---- 677 (872)
..|. ..+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++++++|||||+++++|...+.
T Consensus 80 ~~y~--i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYE--VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceE--EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 3455 8899999999999999864 68999999986432 335678899999999999999999999987654
Q ss_pred -eEEEEcccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccc
Q 002875 678 -AYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 756 (872)
Q Consensus 678 -~~lv~ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~ 756 (872)
.|+||||+++|+|.+++....++.+++.|+.||++||+|||+. +|+||||||+||+++.+ .+||+|||+++....
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred eeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 7999999999999999988889999999999999999999999 99999999999999986 899999999876543
Q ss_pred cCCCCcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002875 757 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 836 (872)
Q Consensus 757 ~~~~~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (872)
. ....++..|++||..... ++.++|||||||++|||++|..|+..... ... ..........
T Consensus 234 ~--~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~----------~~~------~~~~~~~~~~ 294 (681)
T 2pzi_A 234 F--GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV----------DGL------PEDDPVLKTY 294 (681)
T ss_dssp C--SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC----------SSC------CTTCHHHHHC
T ss_pred C--CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc----------ccc------cccccccccC
Confidence 2 223355667888877654 47899999999999999999777653110 000 0011112234
Q ss_pred HHHHHHHHHcccCCCCCCCC-HHHHHHHHcc
Q 002875 837 KLVLDVALLCTRSTPSDRPS-MEEALKLLSG 866 (872)
Q Consensus 837 ~~~~~l~~~cl~~dp~~Rpt-~~~v~~~L~~ 866 (872)
..+.+++.+||+.||++||+ ++++.+.|..
T Consensus 295 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 295 DSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 56789999999999999995 5555555543
No 284
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.9e-32 Score=317.92 Aligned_cols=307 Identities=15% Similarity=0.114 Sum_probs=187.4
Q ss_pred CCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEee
Q 002875 41 LTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLH 120 (872)
Q Consensus 41 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 120 (872)
+.+++.|++++|.+..+.+..|..+++|++|+|++|.+.+..|..|..+++|++|+|++|.+.+..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45666666666666655555556666666666666666655555666666666666666666665566666666666666
Q ss_pred CccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcc
Q 002875 121 LAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG 200 (872)
Q Consensus 121 L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 200 (872)
|++|.+++..+..|+.+++|++|++++|.+.+..|..+.++++|++|++++|.+.+.. ++.+++|+.|++++|.+.+
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 6666666554455566666666666666666666666666667777777777666532 3445667777777776653
Q ss_pred cCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCC
Q 002875 201 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 280 (872)
Q Consensus 201 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~ 280 (872)
+...++|+.|++++|.+....+. + .++|+.|++++|.+++ +..+..+++|+.|++++|.+.+..|..+..
T Consensus 207 -----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 -----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp -----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 23445677777777776643222 1 2567777777777765 356677777777777777777777777777
Q ss_pred CCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEE
Q 002875 281 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYID 360 (872)
Q Consensus 281 ~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 360 (872)
+++|+.|++++|.+.+ +|..+ ..+++|+.|+|++|.++ .+|..+..+++|++|+
T Consensus 277 l~~L~~L~Ls~N~l~~-l~~~~------------------------~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 277 MQRLERLYISNNRLVA-LNLYG------------------------QPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CSSCCEEECTTSCCCE-EECSS------------------------SCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred ccCCCEEECCCCCCCC-CCccc------------------------ccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 7777777777777754 23322 23444555555555554 2333444455555555
Q ss_pred cCCCcCCCCCCchhhhhcccccccccCCC
Q 002875 361 LSRNGFTGGIPTDINQASKLEYFNVSNNP 389 (872)
Q Consensus 361 Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~ 389 (872)
+++|.+.+.. +..+++|++|++++|+
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~ 356 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHND 356 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSC
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCC
Confidence 5555554321 3334455555555553
No 285
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=6.6e-32 Score=299.44 Aligned_cols=310 Identities=19% Similarity=0.174 Sum_probs=242.2
Q ss_pred CCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEE
Q 002875 64 SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHM 143 (872)
Q Consensus 64 ~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L 143 (872)
.+.++++|++++|.+....+..|..+++|++|+|++|.+.+..+..|+.+++|++|+|++|.+++..|..++.+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46899999999999986655568999999999999999998888899999999999999999999889999999999999
Q ss_pred EccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCc
Q 002875 144 EIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS 223 (872)
Q Consensus 144 ~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 223 (872)
++++|.+....+..+.++++|++|++++|.+.+..|..+..+++|++|++++|.+++. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 9999998865555578999999999999999988888899999999999999999875 3677899999999999987
Q ss_pred CcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCC
Q 002875 224 GPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDIC 303 (872)
Q Consensus 224 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~ 303 (872)
+ +...++|+.|++++|.+... |.. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+.+..|..+
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~- 268 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPF- 268 (390)
T ss_dssp E-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGG-
T ss_pred c-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHc-
Confidence 4 33456899999999999854 332 357999999999999864 578889999999999999876555444
Q ss_pred CCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccc
Q 002875 304 SGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYF 383 (872)
Q Consensus 304 ~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 383 (872)
..+++|+.|++++|++++ ++..+..+++|++|++++|++. .+|..+..+++|++|
T Consensus 269 -----------------------~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L 323 (390)
T 3o6n_A 269 -----------------------VKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 323 (390)
T ss_dssp -----------------------TTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred -----------------------cccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEE
Confidence 445556666666666554 2334455566666666666655 344445555666666
Q ss_pred cccCCCCCCCcCCcccCCCcccccccccccccC
Q 002875 384 NVSNNPKLGGMIPAQTWSLPSLQNFSASACNIT 416 (872)
Q Consensus 384 ~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~ 416 (872)
++++|+.. . + ....+++|+.|++++|.+.
T Consensus 324 ~L~~N~i~-~-~--~~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 324 YLDHNSIV-T-L--KLSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp ECCSSCCC-C-C--CCCTTCCCSEEECCSSCEE
T ss_pred ECCCCccc-e-e--CchhhccCCEEEcCCCCcc
Confidence 66666432 1 1 1334556666666666543
No 286
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-33 Score=311.63 Aligned_cols=231 Identities=19% Similarity=0.138 Sum_probs=170.0
Q ss_pred hhhhccCCCCCceeeee-cCCCcEEEEEEeeccc----hhHHHHHHHHHHhhccCC-CCce----------e--------
Q 002875 612 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRH-KNLI----------R-------- 667 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~-~~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~H-~niv----------~-------- 667 (872)
..+.||+|+||.||+|+ ..+|+.||||++.... ...+.+.+|+.+++.++| +|.. .
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 67889999999999999 5789999999987322 235678899999999987 3221 1
Q ss_pred ---EEEEEec-----CCeeEEEEcccCCCChHHHhh---------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCC
Q 002875 668 ---LLGFCYN-----RHQAYLLYDYLPNGNLSEKIR---------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 730 (872)
Q Consensus 668 ---l~~~~~~-----~~~~~lv~ey~~~g~L~~~l~---------~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdl 730 (872)
+..++.. ....+++|+++ +|+|.+++. ...++..+..++.|+++||+|||+. +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 1111111 12457777766 579999984 1235678889999999999999999 9999999
Q ss_pred CCCCeeeCCCCCeeEccccccccccccCCCCcccccccCchhhh----------cccCCcccccchhHHHHHHHHHcCCC
Q 002875 731 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFY----------NAMKEEMYMDVYGFGEIILEILTNGR 800 (872)
Q Consensus 731 k~~Nill~~~~~~ki~dfg~~~~~~~~~~~~~~~~~~~~~~e~~----------~~~~~~~~~Dv~S~Gvil~el~tg~~ 800 (872)
||+|||++.++.+||+|||+++....... ...+ ..|++||++ ....++.++|||||||++|||+||+.
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~-~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAV-SPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEEC-CCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccc-cCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 99999999999999999999876544322 2234 667888887 44557789999999999999999999
Q ss_pred CCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002875 801 LTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 862 (872)
Q Consensus 801 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~~v~~ 862 (872)
||........ ........ . .....+.+++.+||+.||++|||+.|+++
T Consensus 316 Pf~~~~~~~~------~~~~~~~~-~-------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 316 PNTDDAALGG------SEWIFRSC-K-------NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCCTTGGGSC------SGGGGSSC-C-------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcchhhh------HHHHHhhc-c-------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9875432111 11111111 1 11245778999999999999999888754
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.98 E-value=1.5e-31 Score=313.00 Aligned_cols=310 Identities=17% Similarity=0.137 Sum_probs=223.3
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
+..++.|++++|.+..+.+..|.++++|++|+|++|.+.+..|..|..+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 46677788888777776666677777888888888877777777777888888888888877777777777788888888
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcc
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 176 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~ 176 (872)
|++|.+.+..+..|+++++|++|+|++|.+++..|..++.+++|++|++++|.+.+. .+..+++|+.|++++|.+.+
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc
Confidence 888877765555667788888888888877777777777788888888877776653 24556777778887777764
Q ss_pred cCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccC
Q 002875 177 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 256 (872)
Q Consensus 177 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 256 (872)
. ...++|+.|++++|.+....+.. .++|+.|++++|.+++ +..+..+++|+.|++++|.+.+..|..+..
T Consensus 207 l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 L-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp E-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred c-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 2 33456777888877776544322 2567778888887775 356777778888888888877777777777
Q ss_pred CCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEE
Q 002875 257 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 336 (872)
Q Consensus 257 l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 336 (872)
+++|+.|++++|.+++ +|..+..+++|+.|++++|.+. .+ |..+..+++|+.|+
T Consensus 277 l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i------------------------~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 277 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HV------------------------ERNQPQFDRLENLY 330 (597)
T ss_dssp CSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CC------------------------GGGHHHHTTCSEEE
T ss_pred ccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-cc------------------------CcccccCCCCCEEE
Confidence 7888888888877775 4555666777777777777664 22 22345567778888
Q ss_pred cCCCccccccCccCCCCCCCcEEEcCCCcCCC
Q 002875 337 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTG 368 (872)
Q Consensus 337 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 368 (872)
+++|.+++. .+..+++|+.|++++|.+.+
T Consensus 331 L~~N~l~~~---~~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 331 LDHNSIVTL---KLSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CCSSCCCCC---CCCTTCCCSEEECCSSCEEH
T ss_pred CCCCCCCCc---ChhhcCCCCEEEeeCCCCCC
Confidence 888877654 25667777788888877653
No 288
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1.8e-32 Score=293.48 Aligned_cols=250 Identities=27% Similarity=0.384 Sum_probs=170.7
Q ss_pred CCCCEEECcCCcCcc--cCCccccCCCCCcEEECcC-CcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcE
Q 002875 42 TSLISLDISRNNFSG--HFPGGIQSLRNLLVLDAFS-NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 118 (872)
Q Consensus 42 ~~L~~L~Ls~N~i~~--~~~~~~~~l~~L~~LdL~~-n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 118 (872)
.+++.|+|++|.+.+ .+|..|..+++|++|++++ |.+.+.+|..|.++++|++|+|++|.+.+..|..|+++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 355666666666655 5556666666666666663 5565556666666666666666666666556666666666666
Q ss_pred eeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCC-CCcEEEeecCCCcccCCccCcCCCCCCEEEccCCC
Q 002875 119 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS-EVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ 197 (872)
Q Consensus 119 L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~-~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~ 197 (872)
|++++|.+++.+|..+..+++|++|++++|.+.+.+|..+.++. +|++|++++|.+.+.+|..+..++ |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 66666666556666666666666666666666666666666666 677777777777777777777665 7777777777
Q ss_pred CcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCcc
Q 002875 198 LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN 277 (872)
Q Consensus 198 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~ 277 (872)
+.+..|..|..+++|+.|++++|++++..|. +..+++|++|++++|++++.+|..+..+++|++|++++|.+++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 7777777777777777777777777655444 667777777777777777777777777777888888888777777765
Q ss_pred CCCCCCCcEEecCCCee
Q 002875 278 LGRNSKLRWVDVSTNNF 294 (872)
Q Consensus 278 ~~~~~~L~~L~ls~n~l 294 (872)
..+++|+.+++++|..
T Consensus 288 -~~l~~L~~l~l~~N~~ 303 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNKC 303 (313)
T ss_dssp -TTGGGSCGGGTCSSSE
T ss_pred -ccccccChHHhcCCCC
Confidence 6677777788887763
No 289
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=3e-31 Score=289.42 Aligned_cols=305 Identities=26% Similarity=0.344 Sum_probs=210.6
Q ss_pred ccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCc
Q 002875 38 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 117 (872)
Q Consensus 38 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 117 (872)
+..+++|++|++++|.+... + .+..+++|++|++++|.++...+ +..+++|++|++++|.+... ..|.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCC
Confidence 44566677777777666532 3 36666777777777776664322 66677777777777766542 2466777777
Q ss_pred EeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCC
Q 002875 118 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ 197 (872)
Q Consensus 118 ~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~ 197 (872)
+|++++|.+.+..+ +..+++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 77777776654332 6666666666666664443333 26677777777777777764433 6677778888888777
Q ss_pred CcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCcc
Q 002875 198 LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN 277 (872)
Q Consensus 198 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~ 277 (872)
+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++. +.
T Consensus 189 l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~ 260 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NA 260 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GG
T ss_pred cccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hh
Confidence 765433 6777778888888877765433 6777778888888887775433 67777788888877777653 34
Q ss_pred CCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCc
Q 002875 278 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDIN 357 (872)
Q Consensus 278 ~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 357 (872)
+..+++|+.|++++|.+.+. +.+..+++|+.|++++|.+++..+..+..+++|+
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~--------------------------~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 261 VKDLTKLKMLNVGSNQISDI--------------------------SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--------------------------GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred HhcCCCcCEEEccCCccCCC--------------------------hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 66677777777777766421 2356678888888888888888888888888899
Q ss_pred EEEcCCCcCCCCCCchhhhhcccccccccCCC
Q 002875 358 YIDLSRNGFTGGIPTDINQASKLEYFNVSNNP 389 (872)
Q Consensus 358 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n~ 389 (872)
+|++++|.+++..| +..+++|++|++++|+
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQV 344 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC-
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhc
Confidence 99999988887655 7778888999998885
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=5.3e-31 Score=287.38 Aligned_cols=304 Identities=20% Similarity=0.299 Sum_probs=256.5
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
++.|+.|++++|.+..+ + .+..+++|++|++++|.+.+..+ |..+++|++|++++|.+.. + .++.++++|++|+
T Consensus 43 l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEE
T ss_pred cccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEE
Confidence 78899999999999865 3 48899999999999999986543 9999999999999999985 3 3699999999999
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcc
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 176 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~ 176 (872)
+++|.+.+. +. +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 117 l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 999999864 33 9999999999999997655444 48999999999999998776544 7889999999999999986
Q ss_pred cCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccC
Q 002875 177 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 256 (872)
Q Consensus 177 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 256 (872)
..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+.+. +.+..
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~ 263 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKD 263 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTT
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhc
Confidence 443 8889999999999999987654 8899999999999999986544 89999999999999999864 56889
Q ss_pred CCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEE
Q 002875 257 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 336 (872)
Q Consensus 257 l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 336 (872)
+++|++|++++|.+++. +.+..+++|+.|++++|.+.+..| ..+..+++|+.|+
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~------------------------~~l~~l~~L~~L~ 317 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDM------------------------EVIGGLTNLTTLF 317 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGH------------------------HHHHTCTTCSEEE
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcCh------------------------hHhhccccCCEEE
Confidence 99999999999999864 457788899999999888764332 3456678888888
Q ss_pred cCCCccccccCccCCCCCCCcEEEcCCCcCC
Q 002875 337 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFT 367 (872)
Q Consensus 337 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 367 (872)
+++|++++..| +..+++|++|++++|.++
T Consensus 318 L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 318 LSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccCCccccccC--hhhhhccceeehhhhccc
Confidence 88888887665 777888888888888775
No 291
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=5.9e-32 Score=289.42 Aligned_cols=249 Identities=27% Similarity=0.422 Sum_probs=208.3
Q ss_pred CCCcEEECCCCCCcc--cCCccccCCCCCCEEECcC-CcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCE
Q 002875 18 NELVDLNLSHNSFSG--QFPVEIFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 94 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~Ls~-N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~ 94 (872)
..++.|+|++|.+.+ .+|.+|.++++|++|+|++ |.+.+.+|..|..+++|++|++++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 468888888888887 7788888888888888884 8888888888888888888888888888788888888888888
Q ss_pred EEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCC-CCCEEEccCccCcccCCccccCCCCCcEEEeecCC
Q 002875 95 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK-TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN 173 (872)
Q Consensus 95 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~-~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~ 173 (872)
|+|++|.+.+..|..|+++++|++|++++|.+++.+|..+..++ +|++|++++|.+.+.+|..+..+. |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 88888888888888888888888888888888878888888887 888888888888888888888776 8888888888
Q ss_pred CcccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCcc
Q 002875 174 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 253 (872)
Q Consensus 174 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 253 (872)
+.+..|..+..+++|+.|++++|.+++..|. +..+++|++|++++|++++.+|..+..+++|+.|++++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 8888888888888888888888888766654 777888888888888888788888888888888888888888777765
Q ss_pred ccCCCCcceeeccccc
Q 002875 254 LVQLPSLEILFIWNNY 269 (872)
Q Consensus 254 l~~l~~L~~L~l~~n~ 269 (872)
..+++|+.+++++|.
T Consensus 288 -~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNK 302 (313)
T ss_dssp -TTGGGSCGGGTCSSS
T ss_pred -ccccccChHHhcCCC
Confidence 778888888888887
No 292
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=2e-33 Score=304.86 Aligned_cols=241 Identities=12% Similarity=0.126 Sum_probs=178.6
Q ss_pred hhcCcchhhhccCCCCCceeeeecCCCcEEEEEEeeccch---------hHHHHHHHHHHhhccC---------CCCcee
Q 002875 606 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVR---------HKNLIR 667 (872)
Q Consensus 606 ~~~~~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~---------H~niv~ 667 (872)
+.|. ..+.||+|+||.||+|+. +|+.||||++..... ..+.+.+|+.++++++ |||||+
T Consensus 20 ~~y~--~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 20 EKLQ--RCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHH--TCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccch--heeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 3455 889999999999999987 889999999975421 2367888999988885 888888
Q ss_pred EEEEEe------------------------------cCCeeEEEEcccCCCChHHHhh-CCCCHHHHHHHHHHHHHHHHH
Q 002875 668 LLGFCY------------------------------NRHQAYLLYDYLPNGNLSEKIR-TKRDWAAKYKIVLGVARGLCF 716 (872)
Q Consensus 668 l~~~~~------------------------------~~~~~~lv~ey~~~g~L~~~l~-~~~~~~~~~~i~~~i~~gl~~ 716 (872)
+.+++. +.+..|+|||||++|++.+.+. ...++.+...++.|++.||+|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 877643 2678999999999997666554 456889999999999999999
Q ss_pred Hh-hCCCCCcccCCCCCCCeeeCCCC--------------------CeeEccccccccccccCCCCcccccccCchhhhc
Q 002875 717 LH-HDCYPAIPHGDLKASNIVFDENM--------------------EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYN 775 (872)
Q Consensus 717 lH-~~~~~~i~Hrdlk~~Nill~~~~--------------------~~ki~dfg~~~~~~~~~~~~~~~~~~~~~~e~~~ 775 (872)
|| +. +|+||||||+|||++.++ .+||+|||+++..... ...++..|++||.+.
T Consensus 177 lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 177 AEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---IVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---EEECCCCTTCSGGGC
T ss_pred HHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---cEEEeecccChhhhc
Confidence 99 88 999999999999999887 8999999999865432 223556688889887
Q ss_pred ccCCcccccchhHHHH-HHHHHcCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHcccCCCCCC
Q 002875 776 AMKEEMYMDVYGFGEI-ILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 854 (872)
Q Consensus 776 ~~~~~~~~Dv~S~Gvi-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R 854 (872)
+.. +.++||||+|++ .+++++|..||.+.... ............... ....+.......++.+++.+||+.|
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dli~~~L~~d---- 323 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL-HYLTDKMLKQMTFKT-KCNTPAMKQIKRKIQEFHRTMLNFS---- 323 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH-HHHHHHHHHTCCCSS-CCCSHHHHHHHHHHHHHHHHGGGSS----
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcchhhh-hHHHHhhhhhhccCc-ccchhhhhhcCHHHHHHHHHHhccC----
Confidence 655 789999998776 77888888877421000 000000000100111 1112223556778999999999976
Q ss_pred CCHHHHH-HH
Q 002875 855 PSMEEAL-KL 863 (872)
Q Consensus 855 pt~~~v~-~~ 863 (872)
|++|++ ++
T Consensus 324 -sa~e~l~~H 332 (336)
T 2vuw_A 324 -SATDLLCQH 332 (336)
T ss_dssp -SHHHHHHHC
T ss_pred -CHHHHHhcC
Confidence 999998 54
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.5e-29 Score=273.59 Aligned_cols=250 Identities=23% Similarity=0.310 Sum_probs=171.5
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
.++.++++++.+.. +|..+. ++|++|+|++|.+.+..+..|..+++|++|++++|.+++..|..|.++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCccc-cCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 57788888888764 455454 578888888888887777778888888888888888887777788888888888888
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcc--cCCccccCCCCCcEEEeecCCCcc
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG--NIPWQLGNMSEVQYLDIAGANLSG 176 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~--~~p~~~~~l~~L~~L~ls~n~l~~ 176 (872)
+|.+.. +|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.+.. ..+..+.++++|++|++++|.+..
T Consensus 109 ~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 888773 455443 678888888888877666667777777777777776642 455566666777777777776663
Q ss_pred cCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccC
Q 002875 177 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 256 (872)
Q Consensus 177 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 256 (872)
+|..+. ++|++|++++|.+.+..+..|..+++|++|++++|.+++..+..+..+++|+.|++++|++. .+|..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 443332 56666666666666666666666666666666666666555556666666666666666665 45555666
Q ss_pred CCCcceeecccccccccCCccC
Q 002875 257 LPSLEILFIWNNYFSGSLPENL 278 (872)
Q Consensus 257 l~~L~~L~l~~n~l~~~~p~~~ 278 (872)
+++|++|++++|.+++..+..|
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSS
T ss_pred CCCcCEEECCCCcCCccChhhc
Confidence 6666666666666655444333
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=3.1e-29 Score=271.14 Aligned_cols=296 Identities=20% Similarity=0.261 Sum_probs=205.6
Q ss_pred CCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEee
Q 002875 41 LTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLH 120 (872)
Q Consensus 41 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 120 (872)
..++++++++++.+.. +|..+. ++|++|++++|.+++..+..|.++++|++|+|++|.+.+..|..|+++++|++|+
T Consensus 30 ~c~l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EEETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCCeEEEecCCCccc-cCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 3478899999998874 555443 6889999999999887777899999999999999999888888999999999999
Q ss_pred CccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcc--cCCccCcCCCCCCEEEccCCCC
Q 002875 121 LAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG--SIPKELSNLTKLESLFLFRNQL 198 (872)
Q Consensus 121 L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~--~~p~~l~~l~~L~~L~L~~n~l 198 (872)
+++|.++. +|..+. ++|++|++++|.+.+..+..+.++++|+.|++++|.+.. ..+..+..+++|++|++++|.+
T Consensus 107 Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 99998874 454443 677888888877776666667777778888887777743 5666677777777777777777
Q ss_pred cccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccC
Q 002875 199 AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENL 278 (872)
Q Consensus 199 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~ 278 (872)
... |..+. ++|++|++++|++++..+..|..+++|+.|++++|.+.+..+..+..+++|++|++++|.++ .+|..+
T Consensus 184 ~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 259 (330)
T 1xku_A 184 TTI-PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259 (330)
T ss_dssp CSC-CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred ccC-Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh
Confidence 643 32222 57777777777777666677777777777777777777666666777777777777777776 566666
Q ss_pred CCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCcccc--ccCccCCCCCCC
Q 002875 279 GRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG--EIPLKFSQLPDI 356 (872)
Q Consensus 279 ~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L 356 (872)
..+++|++|++++|.+++.-+..++... .....+.++.|++++|.+.. ..|..|..++++
T Consensus 260 ~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l 321 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVR 321 (330)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCG
T ss_pred ccCCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccceEeecCcccccccCccccccccce
Confidence 6667777777777766532222221100 01123556666666666542 334455555556
Q ss_pred cEEEcCCC
Q 002875 357 NYIDLSRN 364 (872)
Q Consensus 357 ~~L~Ls~N 364 (872)
+.+++++|
T Consensus 322 ~~l~L~~N 329 (330)
T 1xku_A 322 AAVQLGNY 329 (330)
T ss_dssp GGEEC---
T ss_pred eEEEeccc
Confidence 66665555
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=9.9e-30 Score=275.17 Aligned_cols=288 Identities=23% Similarity=0.275 Sum_probs=246.2
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
.++.++++++.+.. +|..+. ++|++|+|++|.+.+..|+.|..+++|++|++++|.+++..|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLKA-VPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCccc-cCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 68999999999974 566564 689999999999998888899999999999999999998889999999999999999
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCc--ccCCccccCCCCCcEEEeecCCCcc
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ--GNIPWQLGNMSEVQYLDIAGANLSG 176 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~--~~~p~~~~~l~~L~~L~ls~n~l~~ 176 (872)
+|.+. .+|..+. ++|++|++++|.++...+..+..+++|+.|++++|.+. +..|..+..+ +|++|++++|.+.+
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 99998 4565554 89999999999998887788999999999999999885 3667777777 99999999999986
Q ss_pred cCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccC
Q 002875 177 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 256 (872)
Q Consensus 177 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 256 (872)
+|..+. ++|++|++++|.+.+..+..|..+++|++|++++|++++..+..+..+++|+.|++++|++. .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 565554 78999999999999888888999999999999999999888888999999999999999998 67888999
Q ss_pred CCCcceeecccccccccCCccCCC------CCCCcEEecCCCeee--ecCCCCCCCCCceeEEEcCCCc
Q 002875 257 LPSLEILFIWNNYFSGSLPENLGR------NSKLRWVDVSTNNFN--GSIPPDICSGGVLFKLILFSNN 317 (872)
Q Consensus 257 l~~L~~L~l~~n~l~~~~p~~~~~------~~~L~~L~ls~n~l~--~~~p~~~~~~~~l~~l~l~~n~ 317 (872)
+++|+.|++++|.+++..+..|.. ...++.+++++|.+. +..|..+.....++.+.+.+|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 999999999999999776666654 357899999999886 3444556667778888887764
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.9e-29 Score=273.02 Aligned_cols=295 Identities=24% Similarity=0.271 Sum_probs=240.8
Q ss_pred CCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeC
Q 002875 42 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 121 (872)
Q Consensus 42 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L 121 (872)
.+++.+++++|.+. .+|..+ .++|++|++++|.+.+..|..|.++++|++|+|++|.+.+..|..|+++++|++|++
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCcc-ccCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 37999999999987 456555 368999999999999888889999999999999999999888999999999999999
Q ss_pred ccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCc--ccCCccCcCCCCCCEEEccCCCCc
Q 002875 122 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS--GSIPKELSNLTKLESLFLFRNQLA 199 (872)
Q Consensus 122 ~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~--~~~p~~l~~l~~L~~L~L~~n~l~ 199 (872)
++|.++. +|..+. ++|++|++++|.+.+..+..+.++++|+.|++++|.+. +..+..+..+ +|+.|++++|+++
T Consensus 110 ~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 9999974 555544 78999999999888777777889999999999999985 4677778877 8999999999988
Q ss_pred ccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCC
Q 002875 200 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 279 (872)
Q Consensus 200 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~ 279 (872)
+. |..+. ++|++|++++|.+++..+..|..+++|+.|++++|++.+..+..+..+++|+.|++++|.++ .+|..+.
T Consensus 186 ~l-~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 186 GI-PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp SC-CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred cc-Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 64 43333 68899999999998887788999999999999999998887778888999999999999988 6787888
Q ss_pred CCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccc--cccCccCCCCCCCc
Q 002875 280 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFS--GEIPLKFSQLPDIN 357 (872)
Q Consensus 280 ~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~ 357 (872)
.+++|+.|++++|.+++.-+..++... + ....+.|+.|++++|.+. +..|..|..+++|+
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~----------------~--~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~ 323 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVG----------------F--GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRL 323 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSS----------------C--CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCST
T ss_pred cCccCCEEECCCCCCCccChhHccccc----------------c--ccccccccceEeecCcccccccCcccccccchhh
Confidence 889999999999988743333222110 0 012467889999999887 66778888999999
Q ss_pred EEEcCCCc
Q 002875 358 YIDLSRNG 365 (872)
Q Consensus 358 ~L~Ls~N~ 365 (872)
.+++++|+
T Consensus 324 ~l~l~~n~ 331 (332)
T 2ft3_A 324 AIQFGNYK 331 (332)
T ss_dssp TEEC----
T ss_pred hhhccccc
Confidence 99998874
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=6.5e-33 Score=315.24 Aligned_cols=353 Identities=16% Similarity=0.174 Sum_probs=241.4
Q ss_pred CCCCcEEECCCCCCcccCCcc-ccCCCCCCEEECcCCcCcc----cCCccccCCCCCcEEECcCCcCccccCccc-cCCC
Q 002875 17 FNELVDLNLSHNSFSGQFPVE-IFNLTSLISLDISRNNFSG----HFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLE 90 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~-~~~l~~L~~L~Ls~N~i~~----~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~-~~L~ 90 (872)
.+.|+.|+|++|+++...... |..+++|++|+|++|.+.. .++..+..+++|++||+++|.+....+..+ ..+.
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 356899999999997655444 7789999999999999874 346778889999999999999886555444 3455
Q ss_pred ----CCCEEEccCCcccc----cCCcccCCCCCCcEeeCccCcCCccCCccC-----CCCCCCCEEEccCccCccc----
Q 002875 91 ----HLKVLNLAGSYFSG----PIPSQFGSFKSLEFLHLAGNLLNDQIPAEL-----GMLKTVTHMEIGYNFYQGN---- 153 (872)
Q Consensus 91 ----~L~~L~L~~n~~~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l-----~~L~~L~~L~l~~n~~~~~---- 153 (872)
+|++|+|++|.+.. .++..|..+++|++|+|++|.+++..+..+ ...++|++|++++|.+...
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 79999999999884 558889999999999999999865433332 3356788888888877653
Q ss_pred CCccccCCCCCcEEEeecCCCcccCCccCc-----CCCCCCEEEccCCCCccc----CCcccccCCCCCEEeCcCCCCcC
Q 002875 154 IPWQLGNMSEVQYLDIAGANLSGSIPKELS-----NLTKLESLFLFRNQLAGQ----VPWEFSRVTTLKSLDLSDNRLSG 224 (872)
Q Consensus 154 ~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~-----~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~ 224 (872)
++..+..+++|++|++++|.+.+..+..+. ..++|++|++++|.++.. ++..+..+++|++|++++|.++.
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 345556678888888888887654443332 255788888888877753 34556677888888888887764
Q ss_pred cC-----CccccCCCCCCEEEcccccCCCC----CCccccCCCCcceeecccccccccCCccCC-----CCCCCcEEecC
Q 002875 225 PI-----PESFADLKNLRLLSLMYNEMSGT----VPESLVQLPSLEILFIWNNYFSGSLPENLG-----RNSKLRWVDVS 290 (872)
Q Consensus 225 ~~-----~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~-----~~~~L~~L~ls 290 (872)
.. +..+..+++|+.|++++|.++.. ++..+..+++|++|++++|.+.+..+..+. ..++|+.|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 32 22334577788888888877653 455566677788888888777643322221 22467777777
Q ss_pred CCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCC-----CCCCCcEEEcCCCc
Q 002875 291 TNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFS-----QLPDINYIDLSRNG 365 (872)
Q Consensus 291 ~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~ 365 (872)
+|.+++.... .++..+..+++|++|++++|.+++..+..+. ..++|++|++++|.
T Consensus 322 ~n~l~~~~~~--------------------~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 322 SCSFTAACCS--------------------HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp TSCCBGGGHH--------------------HHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred CCCCchHHHH--------------------HHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 7766532100 0223344556777777777776654333222 15677777777777
Q ss_pred CCC----CCCchhhhhcccccccccCCC
Q 002875 366 FTG----GIPTDINQASKLEYFNVSNNP 389 (872)
Q Consensus 366 l~~----~~~~~~~~l~~L~~L~ls~n~ 389 (872)
+++ .++..+..+++|++|++++|+
T Consensus 382 i~~~~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 382 VSDSSCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp CCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred CChhhHHHHHHHHHhCCCccEEECCCCC
Confidence 664 455566666777777777774
No 298
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=3e-28 Score=266.01 Aligned_cols=276 Identities=21% Similarity=0.224 Sum_probs=221.9
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEc
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 97 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L 97 (872)
+...+.+.++|.++.+ |..+. ++|++|++++|.+.+..++.|..+++|++|++++|.+++..|..|.++++|++|+|
T Consensus 31 ~~~~~c~~~~~~l~~i-P~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLNSI-PSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCSSC-CTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcccc-ccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 3455689999999754 55555 58999999999999877778999999999999999999888888999999999999
Q ss_pred cCCcccccCCcccCCCCCCcEeeCccCcCCccCC-ccCCCCCCCCEEEccCc-cCcccCCccccCCCCCcEEEeecCCCc
Q 002875 98 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYN-FYQGNIPWQLGNMSEVQYLDIAGANLS 175 (872)
Q Consensus 98 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~L~~L~~L~l~~n-~~~~~~p~~~~~l~~L~~L~ls~n~l~ 175 (872)
++|.+++..+..|+++++|++|++++|.++...+ ..+..+++|++|++++| .+....+..+.++++|++|++++|.+.
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 9999987655668999999999999999986554 47889999999999988 456566777888999999999999999
Q ss_pred ccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCcccc---CCCCCCEEEcccccCCC----
Q 002875 176 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFA---DLKNLRLLSLMYNEMSG---- 248 (872)
Q Consensus 176 ~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~L~~n~l~~---- 248 (872)
+..|..+..+++|++|++++|.+....+..+..+++|++|++++|++++..+..+. ....++.++++.+.+.+
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~ 267 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF 267 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHH
T ss_pred ccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchh
Confidence 88888999999999999999998755444456688999999999998876544433 35667888888887765
Q ss_pred CCCccccCCCCcceeecccccccccCCcc-CCCCCCCcEEecCCCeeeec
Q 002875 249 TVPESLVQLPSLEILFIWNNYFSGSLPEN-LGRNSKLRWVDVSTNNFNGS 297 (872)
Q Consensus 249 ~~p~~l~~l~~L~~L~l~~n~l~~~~p~~-~~~~~~L~~L~ls~n~l~~~ 297 (872)
.+|+.+..+++|+.|++++|+++. +|.. +..+++|++|++++|.+.+.
T Consensus 268 ~l~~~l~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 268 QVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp HHHHHHHTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hhHHHHhcccCCCEEECCCCCCCc-cCHHHHhcCCCCCEEEeeCCCccCc
Confidence 256667778888888888888874 4444 57788888888888877654
No 299
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1.1e-27 Score=257.66 Aligned_cols=225 Identities=24% Similarity=0.309 Sum_probs=142.0
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
...++.|+|++|.+. .+|..+.++++|++|+|++|.+. .+|..|..+++|++|+|++|.+. .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 356777777777776 45666777777777777777777 66777777777777777777776 5677777777777777
Q ss_pred ccCCcccccCCcccCC---------CCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEE
Q 002875 97 LAGSYFSGPIPSQFGS---------FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYL 167 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~---------l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L 167 (872)
|++|.+.+.+|..++. +++|++|+|++|.++ . +|..+.++++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~------------------------lp~~l~~l~~L~~L 211 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-S------------------------LPASIANLQNLKSL 211 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-C------------------------CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-c------------------------chHhhcCCCCCCEE
Confidence 7777766667766543 555555555555554 3 44444555555555
Q ss_pred EeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCC
Q 002875 168 DIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 247 (872)
Q Consensus 168 ~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 247 (872)
++++|.+.+ +|..+..+++|++|++++|.+.+.+|..|..+++|++|++++|++.+.+|..+..+++|+.|++++|++.
T Consensus 212 ~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 212 KIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp EEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred EccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 555555553 3444555555555555555555555555555556666666665555555555566666666666666655
Q ss_pred CCCCccccCCCCcceeecccccc
Q 002875 248 GTVPESLVQLPSLEILFIWNNYF 270 (872)
Q Consensus 248 ~~~p~~l~~l~~L~~L~l~~n~l 270 (872)
+.+|+.+..+++|+.+++..+.+
T Consensus 291 ~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 291 SRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CCCCGGGGGSCTTCEEECCGGGS
T ss_pred hhccHHHhhccCceEEeCCHHHH
Confidence 56666666666666665555443
No 300
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=9.8e-32 Score=305.49 Aligned_cols=356 Identities=17% Similarity=0.174 Sum_probs=266.4
Q ss_pred CCCCEEECcCCcCcccCCcc-ccCCCCCcEEECcCCcCcc----ccCccccCCCCCCEEEccCCcccccCCccc-CCCC-
Q 002875 42 TSLISLDISRNNFSGHFPGG-IQSLRNLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGPIPSQF-GSFK- 114 (872)
Q Consensus 42 ~~L~~L~Ls~N~i~~~~~~~-~~~l~~L~~LdL~~n~l~~----~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~-~~l~- 114 (872)
++|++|||++|++....... |..+++|++|++++|.+.. .++..+..+++|++|+|++|.+....+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 57899999999987654333 7889999999999999874 346678889999999999999876444333 2344
Q ss_pred ---CCcEeeCccCcCCc----cCCccCCCCCCCCEEEccCccCcccCCccc-----cCCCCCcEEEeecCCCcccC----
Q 002875 115 ---SLEFLHLAGNLLND----QIPAELGMLKTVTHMEIGYNFYQGNIPWQL-----GNMSEVQYLDIAGANLSGSI---- 178 (872)
Q Consensus 115 ---~L~~L~L~~n~l~~----~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~-----~~l~~L~~L~ls~n~l~~~~---- 178 (872)
+|++|+|++|.++. .++..+..+++|++|++++|.+....+..+ ...++|++|++++|.+.+..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 79999999999974 458889999999999999998764333322 23567999999999888643
Q ss_pred CccCcCCCCCCEEEccCCCCcccCCcccc-----cCCCCCEEeCcCCCCcCc----CCccccCCCCCCEEEcccccCCCC
Q 002875 179 PKELSNLTKLESLFLFRNQLAGQVPWEFS-----RVTTLKSLDLSDNRLSGP----IPESFADLKNLRLLSLMYNEMSGT 249 (872)
Q Consensus 179 p~~l~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~ 249 (872)
+..+..+++|++|++++|.+....+..+. ..++|++|++++|.++.. ++..+..+++|+.|++++|.+.+.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 55566778999999999988754333332 356899999999988763 466777889999999999987653
Q ss_pred C-----CccccCCCCcceeeccccccccc----CCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCC
Q 002875 250 V-----PESLVQLPSLEILFIWNNYFSGS----LPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 320 (872)
Q Consensus 250 ~-----p~~l~~l~~L~~L~l~~n~l~~~----~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~ 320 (872)
. +..+..+++|++|++++|.++.. ++..+..+++|+.|++++|.+.+..+..+..
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~---------------- 306 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE---------------- 306 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH----------------
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH----------------
Confidence 2 22233578899999999988764 5666667888899999888875332111100
Q ss_pred CCCCCCCCCCCCcEEEcCCCccccc----cCccCCCCCCCcEEEcCCCcCCCCCCchhhh-----hcccccccccCCCCC
Q 002875 321 SLSPSLSNCSSLVRLRLEDNSFSGE----IPLKFSQLPDINYIDLSRNGFTGGIPTDINQ-----ASKLEYFNVSNNPKL 391 (872)
Q Consensus 321 ~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~ls~n~~l 391 (872)
......++|+.|++++|.+++. ++..+..+++|++|++++|.+....+..+.. .++|++|++++|. +
T Consensus 307 ---~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~-i 382 (461)
T 1z7x_W 307 ---TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD-V 382 (461)
T ss_dssp ---HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC-C
T ss_pred ---HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC-C
Confidence 0012346899999999999865 4556677899999999999987544444433 5699999999995 3
Q ss_pred CC----cCCcccCCCcccccccccccccCC
Q 002875 392 GG----MIPAQTWSLPSLQNFSASACNITG 417 (872)
Q Consensus 392 ~~----~~~~~~~~l~~L~~L~l~~~~l~~ 417 (872)
.. .++..+..+++|++|++++|.++.
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 32 456666678999999999998864
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=8.5e-28 Score=256.92 Aligned_cols=279 Identities=20% Similarity=0.241 Sum_probs=193.7
Q ss_pred cEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccc--cCccccCCCCCCEEEcc
Q 002875 21 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS--VPAEISQLEHLKVLNLA 98 (872)
Q Consensus 21 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~--~p~~~~~L~~L~~L~L~ 98 (872)
+.++.+++.++.+ |..+. ++|++|+|++|.+....++.|..+++|++|++++|.+... .|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~~i-p~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLTSV-PTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCSSC-CSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcccC-CCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 4677777777643 44443 5777777777777755555577777777777777777632 25566667777777777
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCC-ccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcc-
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG- 176 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~- 176 (872)
+|.+.. +|..|..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..+..+.++++|++|++++|.+.+
T Consensus 87 ~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 777763 55567777777777777777765544 567777777777777777777677777777788888888877765
Q ss_pred cCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccC
Q 002875 177 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 256 (872)
Q Consensus 177 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 256 (872)
..|..+..+++|++|++++|.+++..|..|..+++|++|++++|++++..+..+..+++|+.|++++|++.+..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 56777777788888888888887777777777788888888888887766667777888888888888887777777777
Q ss_pred CC-CcceeecccccccccCCc--cCCCCCCCcEEecCCCeeeecCCCCCC
Q 002875 257 LP-SLEILFIWNNYFSGSLPE--NLGRNSKLRWVDVSTNNFNGSIPPDIC 303 (872)
Q Consensus 257 l~-~L~~L~l~~n~l~~~~p~--~~~~~~~L~~L~ls~n~l~~~~p~~~~ 303 (872)
++ +|++|++++|.+.+..+. ....+...+.+.+..+.+....|..+.
T Consensus 246 ~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp CCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGT
T ss_pred hhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhC
Confidence 74 788888888877653211 011122233344555566555555443
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=4.3e-28 Score=264.69 Aligned_cols=259 Identities=19% Similarity=0.180 Sum_probs=225.6
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
.+.|++|+|++|.++++.+..|.++++|++|+|++|.+.+..|+.|..+++|++||+++|.+++..+..|.++++|++|+
T Consensus 51 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 51 TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 46899999999999998888999999999999999999998899999999999999999999976666699999999999
Q ss_pred ccCCcccccCC-cccCCCCCCcEeeCccC-cCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCC
Q 002875 97 LAGSYFSGPIP-SQFGSFKSLEFLHLAGN-LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 174 (872)
Q Consensus 97 L~~n~~~~~~p-~~~~~l~~L~~L~L~~n-~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l 174 (872)
|++|.+....+ ..|.++++|++|++++| .+....+..++.+++|++|++++|.+.+..|..+.++++|++|++++|.+
T Consensus 131 L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 131 LLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred CCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 99999986444 48999999999999999 57777788999999999999999999998899999999999999999999
Q ss_pred cccCCccCcCCCCCCEEEccCCCCcccCCcccc---cCCCCCEEeCcCCCCcC----cCCccccCCCCCCEEEcccccCC
Q 002875 175 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFS---RVTTLKSLDLSDNRLSG----PIPESFADLKNLRLLSLMYNEMS 247 (872)
Q Consensus 175 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~n~l~ 247 (872)
....+..+..+++|+.|++++|.+++..+..+. ....++.++++++.+++ .+|..+..+++|+.|++++|+++
T Consensus 211 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 211 ILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp TTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred ccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 754444455689999999999999976654433 45678899999998875 36778899999999999999999
Q ss_pred CCCCccccCCCCcceeecccccccccCC
Q 002875 248 GTVPESLVQLPSLEILFIWNNYFSGSLP 275 (872)
Q Consensus 248 ~~~p~~l~~l~~L~~L~l~~n~l~~~~p 275 (872)
...+..+..+++|++|++++|.+.+..|
T Consensus 291 ~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 291 SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 5444446899999999999999986544
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=3.8e-27 Score=251.84 Aligned_cols=262 Identities=19% Similarity=0.226 Sum_probs=160.9
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCccc--CCccccCCCCCcEEECcCCcCccccCccccCCCCCCEE
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH--FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 95 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~--~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L 95 (872)
+.|++|+|++|.++.+.+..|.++++|++|+|++|.+... .+..+..+++|++|++++|.+. .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 4566666666666655555566666666777666666532 2445556666666666666665 345556666666677
Q ss_pred EccCCcccccCC-cccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcc-cCCccccCCCCCcEEEeecCC
Q 002875 96 NLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGAN 173 (872)
Q Consensus 96 ~L~~n~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~-~~p~~~~~l~~L~~L~ls~n~ 173 (872)
++++|.+.+..+ ..|.++++|++|++++|.+.+..+..+..+++|++|++++|.+.+ .+|..+..+++|++|++++|.
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 666666665443 456666666666666666666666666666666666666666654 456666666666666666666
Q ss_pred CcccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCC-CCCEEEcccccCCCCCC-
Q 002875 174 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK-NLRLLSLMYNEMSGTVP- 251 (872)
Q Consensus 174 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p- 251 (872)
+.+..|..+..+++|++|++++|.+.+..+..|..+++|++|++++|++++..|..+..++ +|+.|++++|++....+
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 6666666666666666666666666666555666666666666666666666666666663 66666666666654321
Q ss_pred -ccccCCCCcceeecccccccccCCccCCC
Q 002875 252 -ESLVQLPSLEILFIWNNYFSGSLPENLGR 280 (872)
Q Consensus 252 -~~l~~l~~L~~L~l~~n~l~~~~p~~~~~ 280 (872)
.....+...+.+.+..+.+....|..+.+
T Consensus 267 ~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 267 QSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp HHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred HHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 11122233333444445555445554443
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.1e-26 Score=262.47 Aligned_cols=246 Identities=20% Similarity=0.200 Sum_probs=145.2
Q ss_pred cEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCC
Q 002875 21 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 100 (872)
Q Consensus 21 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n 100 (872)
+.++.+++.++. +|..+. ++|++|+|++|+|.+..++.|..+++|++|+|++|.+.+..|..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 445555555543 233333 35555555555555555555555555555555555555555555555555555555555
Q ss_pred cccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCC-CcccCC
Q 002875 101 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN-LSGSIP 179 (872)
Q Consensus 101 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~-l~~~~p 179 (872)
.+....+..|..+++|++|+|++|.++...+.. +.++++|+.|++++|+ +....+
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~------------------------~~~l~~L~~L~l~~~~~l~~i~~ 189 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYA------------------------FNRVPSLMRLDLGELKKLEYISE 189 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTT------------------------TTTCTTCCEEECCCCTTCCEECT
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhH------------------------HhcCCcccEEeCCCCCCccccCh
Confidence 555444444555555555555555554444444 4455555555555532 222223
Q ss_pred ccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCC
Q 002875 180 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 259 (872)
Q Consensus 180 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 259 (872)
..+..+++|++|++++|.+++. | .+..+++|++|+|++|++++..|..|..+++|+.|++++|++.+..+..+..+++
T Consensus 190 ~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 267 (452)
T 3zyi_A 190 GAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLAS 267 (452)
T ss_dssp TTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCC
Confidence 3456666666666666666643 2 3566667777777777776666666777777777777777777666666777777
Q ss_pred cceeecccccccccCCccCCCCCCCcEEecCCCeee
Q 002875 260 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 295 (872)
Q Consensus 260 L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~ 295 (872)
|+.|++++|++++..+..+..+++|+.|++++|.+.
T Consensus 268 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 268 LVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 777777777777666666667777777777777765
No 305
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.6e-26 Score=260.08 Aligned_cols=248 Identities=20% Similarity=0.203 Sum_probs=145.8
Q ss_pred CcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 20 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 20 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
.+.++.+++.++. +|..+. ++++.|+|++|+|....+..|..+++|++|+|++|.+....+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLRE-VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCSS-CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcCc-CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 4456666666653 344443 4566666666666666666666666666666666666655556666666666666666
Q ss_pred CcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCC
Q 002875 100 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 179 (872)
Q Consensus 100 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p 179 (872)
|.++...+..|..+++|++|+|++|.++...+..|..+++|++|++++|.. +....+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~-----------------------l~~i~~ 178 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR-----------------------LSYISE 178 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTT-----------------------CCEECT
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCC-----------------------cceeCc
Confidence 666655555566666666666666666555444555555555555544322 222222
Q ss_pred ccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCC
Q 002875 180 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 259 (872)
Q Consensus 180 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 259 (872)
..|..+++|++|++++|.++.. | .+..+++|++|+|++|++++..|..|..+++|+.|++++|++.+..+..|..+++
T Consensus 179 ~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 256 (440)
T 3zyj_A 179 GAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS 256 (440)
T ss_dssp TTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTT
T ss_pred chhhcccccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCC
Confidence 3445555555555555555532 2 2455556666666666666555556666666666666666666555555666666
Q ss_pred cceeecccccccccCCccCCCCCCCcEEecCCCeee
Q 002875 260 LEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 295 (872)
Q Consensus 260 L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~ 295 (872)
|+.|++++|++++..+..+..+++|+.|++++|.+.
T Consensus 257 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 257 LVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 666666666666555555666666666666666664
No 306
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=4.5e-27 Score=252.97 Aligned_cols=236 Identities=19% Similarity=0.232 Sum_probs=206.7
Q ss_pred CCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEe
Q 002875 40 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 119 (872)
Q Consensus 40 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L 119 (872)
..+++++|+|++|.+. .+|..+..+++|++|+|++|.+. .+|..++++++|++|+|++|.+. .+|..|+++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578889999999887 56777888889999999998888 78888888889999999998888 678888888899999
Q ss_pred eCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCc
Q 002875 120 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 199 (872)
Q Consensus 120 ~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 199 (872)
+|++|.+.+.+|..+... .++..+.++++|++|++++|.++ .+|..+..+++|++|++++|.+.
T Consensus 156 ~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred ECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 998888777777655421 12334567899999999999998 78999999999999999999999
Q ss_pred ccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCC
Q 002875 200 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 279 (872)
Q Consensus 200 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~ 279 (872)
+ +|..+..+++|++|++++|++.+.+|..++.+++|+.|++++|++.+.+|..+..+++|++|++++|.+.+.+|..++
T Consensus 220 ~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 220 A-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp C-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred c-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 6 455799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEecCCCeee
Q 002875 280 RNSKLRWVDVSTNNFN 295 (872)
Q Consensus 280 ~~~~L~~L~ls~n~l~ 295 (872)
.+++++.++++.+.+.
T Consensus 299 ~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 299 QLPANCIILVPPHLQA 314 (328)
T ss_dssp GSCTTCEEECCGGGSC
T ss_pred hccCceEEeCCHHHHH
Confidence 9999999999987664
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.2e-26 Score=262.13 Aligned_cols=229 Identities=22% Similarity=0.207 Sum_probs=167.6
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
.+.++.|+|++|+|+++.+.+|.++++|++|+|++|.|.++.+..|.++++|++|+|++|.++...+..|..+++|++|+
T Consensus 74 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 74 PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999987777899999999999
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccC-cCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCc
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGN-LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 175 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n-~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~ 175 (872)
|++|.+....+..|.++++|++|++++| .+....+..+..+++|++|++++|.+.+
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~----------------------- 210 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD----------------------- 210 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-----------------------
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-----------------------
Confidence 9999999888889999999999999985 4443333445555555555555554442
Q ss_pred ccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCcccc
Q 002875 176 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 255 (872)
Q Consensus 176 ~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 255 (872)
. | .+..+++|+.|+|++|.+.+..|..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+..+.
T Consensus 211 -~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 211 -M-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp -C-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred -c-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 2 2 244455555555555555555555555555555555555555555555555555555555555555554445555
Q ss_pred CCCCcceeeccccccc
Q 002875 256 QLPSLEILFIWNNYFS 271 (872)
Q Consensus 256 ~l~~L~~L~l~~n~l~ 271 (872)
.+++|+.|++++|.+.
T Consensus 288 ~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 288 PLRYLVELHLHHNPWN 303 (452)
T ss_dssp TCTTCCEEECCSSCEE
T ss_pred cccCCCEEEccCCCcC
Confidence 5556666666665543
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=6.9e-27 Score=247.03 Aligned_cols=255 Identities=22% Similarity=0.225 Sum_probs=196.6
Q ss_pred CcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 20 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 20 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
-+.++.+++.+..+ |..+ .++|++|+|++|.+.+..++.|..+++|++|++++|.+++..|..|.++++|++|+|++
T Consensus 13 ~~~~~c~~~~l~~i-p~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQAV-PVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCSSC-CTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcccC-CcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 47888999888754 5444 36899999999999988888899999999999999999888788899999999999999
Q ss_pred Cc-ccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccC
Q 002875 100 SY-FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 178 (872)
Q Consensus 100 n~-~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 178 (872)
|. +....|..|..+++|++|++++|.+++..|..+..+++|++|++++|.+.+..+..+.++++|++|++++|.+.+..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 97 77766888999999999999999998877888888888888888888777666666777888888888888887666
Q ss_pred CccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCC
Q 002875 179 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 258 (872)
Q Consensus 179 p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 258 (872)
+..+..+++|++|++++|.+.+..|..|..+++|++|++++|++++..+..+..+++|+.|++++|++....+.. .-..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHH
Confidence 666777888888888888888777777777888888888888887766666777888888888888776432210 0112
Q ss_pred CcceeecccccccccCCccC
Q 002875 259 SLEILFIWNNYFSGSLPENL 278 (872)
Q Consensus 259 ~L~~L~l~~n~l~~~~p~~~ 278 (872)
.++.+..+.+.+....|..+
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHCCSEECCCBEEESGGG
T ss_pred HHHhcccccCccccCCchHh
Confidence 23334445555555555544
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.9e-26 Score=259.50 Aligned_cols=229 Identities=23% Similarity=0.227 Sum_probs=166.5
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
.+.++.|+|++|+|+.+.+.+|.++++|++|+|++|.|.++.++.|.++++|++|+|++|.++...+..|..+++|++|+
T Consensus 63 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 63 STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 46899999999999999999999999999999999999998889999999999999999999987777899999999999
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCc-CCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCc
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNL-LNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 175 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~ 175 (872)
|++|.+....+..|.++++|++|+|++|. +....+..|..+++|++|++++|.+.. +|
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-------------------- 201 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-------------------- 201 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC--------------------
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc--------------------
Confidence 99999998888899999999999999854 544444456666666666666665442 22
Q ss_pred ccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCcccc
Q 002875 176 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 255 (872)
Q Consensus 176 ~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 255 (872)
.+..+++|+.|+|++|.+++..|..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+..+.
T Consensus 202 -----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 276 (440)
T 3zyj_A 202 -----NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 276 (440)
T ss_dssp -----CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTS
T ss_pred -----ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhc
Confidence 234444555555555555554455555555555555555555555555555555555555555555544444455
Q ss_pred CCCCcceeeccccccc
Q 002875 256 QLPSLEILFIWNNYFS 271 (872)
Q Consensus 256 ~l~~L~~L~l~~n~l~ 271 (872)
.+++|+.|++++|.+.
T Consensus 277 ~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 277 PLHHLERIHLHHNPWN 292 (440)
T ss_dssp SCTTCCEEECCSSCEE
T ss_pred cccCCCEEEcCCCCcc
Confidence 5555555555555543
No 310
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=8.8e-29 Score=284.55 Aligned_cols=181 Identities=14% Similarity=0.060 Sum_probs=126.0
Q ss_pred ccCCCCCceeeee-cCCCcEEEEEEeeccc-----------hhHHHHHHHHHHhhcc-CCCCceeEEEEEecCCeeEEEE
Q 002875 616 AARPQSAAGCKAV-LPTGITVSVKKIEWGA-----------TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 616 ~g~g~~~~v~~~~-~~~g~~vavK~~~~~~-----------~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 682 (872)
.+.|+.|.++++. ...|+.||||++.... ...+.+.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 3455555555543 3579999999996531 1245789999999999 6999999999999999999999
Q ss_pred cccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCC--
Q 002875 683 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 760 (872)
Q Consensus 683 ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~-- 760 (872)
||++||+|.++|........ .+|+.||+.||+|+|++ +||||||||+|||+++++.+||+|||+|+........
T Consensus 322 Eyv~G~~L~d~i~~~~~l~~-~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~ 397 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEIDR-EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPT 397 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCCH-HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSH
T ss_pred ecCCCCcHHHHHHhCCCCCH-HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCCcccc
Confidence 99999999999987654433 35899999999999999 9999999999999999999999999999865433222
Q ss_pred CcccccccCchhhhcccCCcccccchhHHHHHHHHHcCCCC
Q 002875 761 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 801 (872)
Q Consensus 761 ~~~~~~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p 801 (872)
...++..|++||...+ .+..++|+||.|++++++.++..+
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 1225667788888765 356678999999999888776544
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=8.9e-27 Score=246.16 Aligned_cols=239 Identities=19% Similarity=0.181 Sum_probs=210.1
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCc-CccccCccccCCCCCCEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQLEHLKVL 95 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~-l~~~~p~~~~~L~~L~~L 95 (872)
.+.|+.|+|++|.++.+.+..|..+++|++|+|++|.+.+..|..|..+++|++|++++|. +....|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 5689999999999999988999999999999999999999889999999999999999997 877778899999999999
Q ss_pred EccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCc
Q 002875 96 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 175 (872)
Q Consensus 96 ~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~ 175 (872)
++++|.+.+..|..|.++++|++|++++|.+++..+..++.+++|++|++++|.+.+..+..+.++++|+.|++++|.+.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 99999999888999999999999999999999888888999999999999999998777777999999999999999999
Q ss_pred ccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCcccc
Q 002875 176 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 255 (872)
Q Consensus 176 ~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 255 (872)
+..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|++....+.. .-...++.+..+.+.+....|..+.
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGT
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhC
Confidence 999999999999999999999999877777999999999999999987543211 0111233444566777666666554
Q ss_pred C
Q 002875 256 Q 256 (872)
Q Consensus 256 ~ 256 (872)
.
T Consensus 270 g 270 (285)
T 1ozn_A 270 G 270 (285)
T ss_dssp T
T ss_pred C
Confidence 3
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=9.2e-28 Score=257.57 Aligned_cols=258 Identities=22% Similarity=0.213 Sum_probs=166.9
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
.++.++++.+.+.......+..+++|++|+|++|.+.+..|+.|..+++|++|++++|.+++..| +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 35556666666665555556666677777777777776666677777777777777777765443 6777777777777
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccC
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 178 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 178 (872)
+|.+++.. ..++|++|++++|.+++..+.. +++|++|++++|.+.+..+..+..+++|++|++++|.+.+..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 77766432 2367777777777776544432 455666777666666655556666667777777777766655
Q ss_pred CccC-cCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCC
Q 002875 179 PKEL-SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 257 (872)
Q Consensus 179 p~~l-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 257 (872)
+..+ ..+++|++|++++|.+++..+ ...+++|++|++++|++++. |..+..+++|+.|++++|+++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 5554 356667777777777665522 22366677777777776643 334666677777777777666 345556666
Q ss_pred CCcceeeccccccc-ccCCccCCCCCCCcEEecC
Q 002875 258 PSLEILFIWNNYFS-GSLPENLGRNSKLRWVDVS 290 (872)
Q Consensus 258 ~~L~~L~l~~n~l~-~~~p~~~~~~~~L~~L~ls 290 (872)
++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 77777777777666 5556666666666666666
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=1.5e-27 Score=255.40 Aligned_cols=249 Identities=19% Similarity=0.163 Sum_probs=151.9
Q ss_pred ccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCc-cccCcccc-------CCCCCCEEEccCCcccccCCcc
Q 002875 38 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFS-GSVPAEIS-------QLEHLKVLNLAGSYFSGPIPSQ 109 (872)
Q Consensus 38 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~-~~~p~~~~-------~L~~L~~L~L~~n~~~~~~p~~ 109 (872)
+...++|++|++++|.+ .+|..+... |+.|++++|.+. ..+|..+. ++++|++|+|++|.+.+..|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34455566666666665 344444332 555566666552 23444333 4566666666666666555555
Q ss_pred c--CCCCCCcEeeCccCcCCccCCccCCCC-----CCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCccc--CCc
Q 002875 110 F--GSFKSLEFLHLAGNLLNDQIPAELGML-----KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS--IPK 180 (872)
Q Consensus 110 ~--~~l~~L~~L~L~~n~l~~~~p~~l~~L-----~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~--~p~ 180 (872)
+ +.+++|++|+|++|.+++. |..++.+ ++|++|++++|.+.+..|..+.++++|++|++++|.+.+. .|.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 4 5666666666666666554 5555444 5666666666666655556666666666666666666543 233
Q ss_pred cC--cCCCCCCEEEccCCCCccc---CCcccccCCCCCEEeCcCCCCcCcCC-ccccCCCCCCEEEcccccCCCCCCccc
Q 002875 181 EL--SNLTKLESLFLFRNQLAGQ---VPWEFSRVTTLKSLDLSDNRLSGPIP-ESFADLKNLRLLSLMYNEMSGTVPESL 254 (872)
Q Consensus 181 ~l--~~l~~L~~L~L~~n~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~l 254 (872)
.+ ..+++|++|++++|++++. ....+..+++|++|++++|++++..| ..+..+++|+.|++++|+++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 33 5667777777777777621 12234566777777777777776553 44556677777777777776 555555
Q ss_pred cCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeee
Q 002875 255 VQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 296 (872)
Q Consensus 255 ~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~ 296 (872)
. ++|++|++++|++++. |. +..+++|++|++++|.+++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 4 6777777777777755 44 6777777777777777653
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=1.7e-27 Score=254.97 Aligned_cols=245 Identities=19% Similarity=0.234 Sum_probs=166.1
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCc-ccCCcccc-------CCCCCcEEECcCCcCccccCccc--c
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFS-GHFPGGIQ-------SLRNLLVLDAFSNSFSGSVPAEI--S 87 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~-~~~~~~~~-------~l~~L~~LdL~~n~l~~~~p~~~--~ 87 (872)
+.|+.|++++|.+ .+|..+... |++|+|++|.+. ...|..+. .+++|++|++++|.+++..|..+ .
T Consensus 43 ~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 118 (312)
T 1wwl_A 43 RSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEA 118 (312)
T ss_dssp EECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSC
T ss_pred CCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHh
Confidence 3466777777777 455555533 777777777773 34454444 57777777777777777677665 7
Q ss_pred CCCCCCEEEccCCcccccCCcccCCC-----CCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCccc--CCccc--
Q 002875 88 QLEHLKVLNLAGSYFSGPIPSQFGSF-----KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN--IPWQL-- 158 (872)
Q Consensus 88 ~L~~L~~L~L~~n~~~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~--~p~~~-- 158 (872)
.+++|++|+|++|.+.+. |..|+.+ ++|++|+|++|.+.+..|..++.+++|++|++++|.+.+. +|..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp CSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred cCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 777777777777777765 6666666 7777777777777777767777777777777777766543 22233
Q ss_pred cCCCCCcEEEeecCCCcc--cCC-ccCcCCCCCCEEEccCCCCcccCC-cccccCCCCCEEeCcCCCCcCcCCccccCCC
Q 002875 159 GNMSEVQYLDIAGANLSG--SIP-KELSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKSLDLSDNRLSGPIPESFADLK 234 (872)
Q Consensus 159 ~~l~~L~~L~ls~n~l~~--~~p-~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 234 (872)
.++++|++|++++|.+.+ .++ ..+..+++|++|++++|++.+..| ..+..+++|++|++++|+++ .+|..+. +
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~ 274 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--A 274 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--S
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--C
Confidence 667777777777777762 112 233466777777777777776654 34555677777777777776 4555554 6
Q ss_pred CCCEEEcccccCCCCCCccccCCCCcceeecccccccc
Q 002875 235 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 272 (872)
Q Consensus 235 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~ 272 (872)
+|+.|++++|++++. |. +..+++|++|++++|.+++
T Consensus 275 ~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 275 KLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 777777777777755 44 6777777777777777654
No 315
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.93 E-value=4.5e-29 Score=293.06 Aligned_cols=328 Identities=13% Similarity=0.082 Sum_probs=161.0
Q ss_pred CccccCCCCCCEEECcCCcCc---ccCCcccc------------CCCCCcEEECcCCcCccccCccccCC--CCCCEEEc
Q 002875 35 PVEIFNLTSLISLDISRNNFS---GHFPGGIQ------------SLRNLLVLDAFSNSFSGSVPAEISQL--EHLKVLNL 97 (872)
Q Consensus 35 ~~~~~~l~~L~~L~Ls~N~i~---~~~~~~~~------------~l~~L~~LdL~~n~l~~~~p~~~~~L--~~L~~L~L 97 (872)
+..+..+++|++|+|+++... +..|..++ .+++|++|+|++|.++...+..+..+ .+|++|+|
T Consensus 66 ~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L 145 (592)
T 3ogk_B 66 DRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKL 145 (592)
T ss_dssp HHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEE
T ss_pred HHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEEC
Confidence 334456667777777664321 22222222 56677777777776665555555442 33777777
Q ss_pred cCCcc-cc-cCCcccCCCCCCcEeeCccCcCCcc----CCccCCCCCCCCEEEccCccCc----ccCCccccCCCCCcEE
Q 002875 98 AGSYF-SG-PIPSQFGSFKSLEFLHLAGNLLNDQ----IPAELGMLKTVTHMEIGYNFYQ----GNIPWQLGNMSEVQYL 167 (872)
Q Consensus 98 ~~n~~-~~-~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~L~~L~~L~l~~n~~~----~~~p~~~~~l~~L~~L 167 (872)
++|.. .. .++....++++|++|+|++|.+++. ++..+..+++|++|++++|.+. +.++..+.++++|+.|
T Consensus 146 ~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L 225 (592)
T 3ogk_B 146 DKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSV 225 (592)
T ss_dssp ESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEE
T ss_pred cCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEE
Confidence 76651 10 1122223566777777777765443 2222344555666666555544 1223334455666666
Q ss_pred EeecCCCcccCCccCcCCCCCCEEEccCCCCc---ccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccc
Q 002875 168 DIAGANLSGSIPKELSNLTKLESLFLFRNQLA---GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 244 (872)
Q Consensus 168 ~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 244 (872)
++++|.+.+ +|..+..+++|++|+++..... ...+..+..+++|+.|+++++.. ..+|..+..+++|+.|++++|
T Consensus 226 ~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~ 303 (592)
T 3ogk_B 226 KVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYA 303 (592)
T ss_dssp ECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTC
T ss_pred eccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCC
Confidence 666665554 4455555666666666532211 11223344555566666555422 234445555556666666665
Q ss_pred cCCCCCC-ccccCCCCcceeecccccccccCCccCCCCCCCcEEecCC-----------CeeeecCCCCCCCCCceeEEE
Q 002875 245 EMSGTVP-ESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST-----------NNFNGSIPPDICSGGVLFKLI 312 (872)
Q Consensus 245 ~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~-----------n~l~~~~p~~~~~~~~l~~l~ 312 (872)
.+++... ..+..+++|+.|+++++...+.++.....+++|+.|++++ |.+++.
T Consensus 304 ~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~--------------- 368 (592)
T 3ogk_B 304 LLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR--------------- 368 (592)
T ss_dssp CCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH---------------
T ss_pred cCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH---------------
Confidence 5432221 2234555666666652222222222223344555555552 121110
Q ss_pred cCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCC-CCCCcEEEcC----CCcCCCC-----CCchhhhhccccc
Q 002875 313 LFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQ-LPDINYIDLS----RNGFTGG-----IPTDINQASKLEY 382 (872)
Q Consensus 313 l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~-----~~~~~~~l~~L~~ 382 (872)
.+......+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|++
T Consensus 369 --------~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~ 440 (592)
T 3ogk_B 369 --------GLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRR 440 (592)
T ss_dssp --------HHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCE
T ss_pred --------HHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCE
Confidence 00011234566777777666666554444443 6666666664 4455432 1122334555555
Q ss_pred ccccC
Q 002875 383 FNVSN 387 (872)
Q Consensus 383 L~ls~ 387 (872)
|++++
T Consensus 441 L~L~~ 445 (592)
T 3ogk_B 441 FAFYL 445 (592)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 55543
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2e-26 Score=247.19 Aligned_cols=246 Identities=20% Similarity=0.168 Sum_probs=214.6
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
.+.|+.|+|++|.++++.|..|.++++|++|+|++|.+.+..+ |..+++|++|++++|.+++.. ..++|++|+
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~ 105 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEE
Confidence 4689999999999999988999999999999999999987654 999999999999999988533 348999999
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccc-cCCCCCcEEEeecCCCc
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQL-GNMSEVQYLDIAGANLS 175 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~-~~l~~L~~L~ls~n~l~ 175 (872)
+++|.+.+..+.. +++|++|++++|.+++..+..++.+++|++|++++|.+.+..+..+ ..+++|++|++++|.++
T Consensus 106 l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 182 (317)
T 3o53_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (317)
T ss_dssp CCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc
Confidence 9999998765543 6789999999999999888899999999999999999988776666 47899999999999998
Q ss_pred ccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCC-CCCCccc
Q 002875 176 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS-GTVPESL 254 (872)
Q Consensus 176 ~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~p~~l 254 (872)
+. + ....+++|++|++++|++++..+ .+..+++|++|++++|+++. +|..+..+++|+.|++++|++. +.+|..+
T Consensus 183 ~~-~-~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 258 (317)
T 3o53_A 183 DV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (317)
T ss_dssp EE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHH
T ss_pred cc-c-cccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHH
Confidence 66 2 33458999999999999997655 58999999999999999984 6778999999999999999998 6778888
Q ss_pred cCCCCcceeecccc-cccccCCc
Q 002875 255 VQLPSLEILFIWNN-YFSGSLPE 276 (872)
Q Consensus 255 ~~l~~L~~L~l~~n-~l~~~~p~ 276 (872)
..+++|+.|+++++ .+.+..|.
T Consensus 259 ~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 259 SKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp HTCHHHHHHHHHHHHHHHSSSSC
T ss_pred hccccceEEECCCchhccCCchh
Confidence 99999999999844 45554443
No 317
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.92 E-value=1.6e-28 Score=288.29 Aligned_cols=400 Identities=17% Similarity=0.092 Sum_probs=281.3
Q ss_pred CCCCcEEECCCCCCc---ccCCcccc------------CCCCCCEEECcCCcCcccCCccccCC--CCCcEEECcCCc-C
Q 002875 17 FNELVDLNLSHNSFS---GQFPVEIF------------NLTSLISLDISRNNFSGHFPGGIQSL--RNLLVLDAFSNS-F 78 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~---~~~~~~~~------------~l~~L~~L~Ls~N~i~~~~~~~~~~l--~~L~~LdL~~n~-l 78 (872)
++.|+.|+|+++... +..|..+. .+++|++|+|++|.+.+..+..+... .+|++|++++|. +
T Consensus 72 ~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~ 151 (592)
T 3ogk_B 72 FPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGF 151 (592)
T ss_dssp CTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEE
T ss_pred CCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCc
Confidence 788999999875421 23333332 78999999999998876666666553 449999999886 2
Q ss_pred cc-ccCccccCCCCCCEEEccCCccccc----CCcccCCCCCCcEeeCccCcCCc----cCCccCCCCCCCCEEEccCcc
Q 002875 79 SG-SVPAEISQLEHLKVLNLAGSYFSGP----IPSQFGSFKSLEFLHLAGNLLND----QIPAELGMLKTVTHMEIGYNF 149 (872)
Q Consensus 79 ~~-~~p~~~~~L~~L~~L~L~~n~~~~~----~p~~~~~l~~L~~L~L~~n~l~~----~~p~~l~~L~~L~~L~l~~n~ 149 (872)
+. .++....++++|++|+|++|.+.+. ++..+..+++|++|++++|.+++ .++..+..+++|+.|++++|.
T Consensus 152 ~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~ 231 (592)
T 3ogk_B 152 TTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFE 231 (592)
T ss_dssp EHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCB
T ss_pred CHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCcc
Confidence 21 1222335789999999999988654 33345678999999999999873 344456678999999999988
Q ss_pred CcccCCccccCCCCCcEEEeecCCCc---ccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcC
Q 002875 150 YQGNIPWQLGNMSEVQYLDIAGANLS---GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI 226 (872)
Q Consensus 150 ~~~~~p~~~~~l~~L~~L~ls~n~l~---~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 226 (872)
+.+ +|..+.++++|+.|+++..... +..+..+..+++|+.|+++.+.. ..+|..+..+++|++|++++|.+++..
T Consensus 232 ~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~ 309 (592)
T 3ogk_B 232 ILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETED 309 (592)
T ss_dssp GGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHH
T ss_pred HHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHH
Confidence 775 6677889999999999864433 33445677889999999987643 345667788999999999999976543
Q ss_pred C-ccccCCCCCCEEEcccccCCCCCCccccCCCCcceeeccc-----------cccccc-CCccCCCCCCCcEEecCCCe
Q 002875 227 P-ESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWN-----------NYFSGS-LPENLGRNSKLRWVDVSTNN 293 (872)
Q Consensus 227 ~-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~-----------n~l~~~-~p~~~~~~~~L~~L~ls~n~ 293 (872)
. ..+..+++|+.|+++.+-....++.....+++|++|++++ |.+++. ++.....+++|+.|+++.|.
T Consensus 310 ~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~ 389 (592)
T 3ogk_B 310 HCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSD 389 (592)
T ss_dssp HHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESC
T ss_pred HHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCC
Confidence 3 3468899999999983322223334446688999999993 555533 22223457889999998888
Q ss_pred eeecCCCCCCC-CCceeEEEcC----CCcCCCC-----CCCCCCCCCCCcEEEcCCCc--cccccCccCC-CCCCCcEEE
Q 002875 294 FNGSIPPDICS-GGVLFKLILF----SNNFTGS-----LSPSLSNCSSLVRLRLEDNS--FSGEIPLKFS-QLPDINYID 360 (872)
Q Consensus 294 l~~~~p~~~~~-~~~l~~l~l~----~n~~~~~-----~~~~~~~l~~L~~L~L~~N~--l~~~~~~~~~-~l~~L~~L~ 360 (872)
+++..+..+.. ..+|+.|.+. .|.+++. ++..+.++++|+.|++++|. +++.....+. .+++|++|+
T Consensus 390 l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~ 469 (592)
T 3ogk_B 390 ITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWML 469 (592)
T ss_dssp CCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEE
T ss_pred ccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEee
Confidence 87654433333 5578888885 5566543 22235668899999997543 5544433333 478899999
Q ss_pred cCCCcCCC-CCCchhhhhcccccccccCCCCCCCcCCcccCCCcccccccccccccCCC
Q 002875 361 LSRNGFTG-GIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN 418 (872)
Q Consensus 361 Ls~N~l~~-~~~~~~~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~ 418 (872)
+++|.+++ .++..+..+++|++|++++|+.....++.....+++|+.|++++|.++..
T Consensus 470 L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 470 LGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp ECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred ccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 99998764 23344566788999999999632222333444678899999999887653
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.1e-25 Score=255.53 Aligned_cols=233 Identities=25% Similarity=0.240 Sum_probs=114.0
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
.|+.|+|++|.++++.|..|..+++|++|+|++|.+.+..| |..+++|++|||++|.+++..+ .++|++|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 45555555555555444555555555555555555544332 5555555555555555443211 1455555555
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccC
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 178 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 178 (872)
+|.+.+..+. .+++|++|+|++|.+++..|..+ +++++|++|++++|.+.+..
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~------------------------~~l~~L~~L~Ls~N~l~~~~ 160 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDE------------------------GCRSRVQYLDLKLNEIDTVN 160 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCG------------------------GGGSSEEEEECTTSCCCEEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhh------------------------cCCCCCCEEECCCCCCCCcC
Confidence 5555443332 23445555555555544444444 44455555555555555444
Q ss_pred CccCc-CCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCC
Q 002875 179 PKELS-NLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 257 (872)
Q Consensus 179 p~~l~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 257 (872)
|..+. .+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++..| .+..+++|+.|++++|.+++ +|..+..+
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred hHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 44443 44555555555555544422 2234555555555555554322 24555555555555555553 34445555
Q ss_pred CCcceeeccccccc-ccCCccCCCCCCCcEEec
Q 002875 258 PSLEILFIWNNYFS-GSLPENLGRNSKLRWVDV 289 (872)
Q Consensus 258 ~~L~~L~l~~n~l~-~~~p~~~~~~~~L~~L~l 289 (872)
++|+.|++++|.+. +.+|..+..++.++.+++
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~ 269 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCcEEec
Confidence 55555555555554 344444444545554444
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=5.5e-26 Score=257.97 Aligned_cols=235 Identities=18% Similarity=0.177 Sum_probs=186.4
Q ss_pred CCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeC
Q 002875 42 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 121 (872)
Q Consensus 42 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L 121 (872)
++|++|+|++|.+.+..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.+.+..+ .++|++|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 377888888888777777777778888888888877776544 7777777777777777765322 267777777
Q ss_pred ccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCccc
Q 002875 122 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ 201 (872)
Q Consensus 122 ~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 201 (872)
++|.+++.. + ..+++|+.|++++|.+++..|..++.+++|+.|+|++|.+++.
T Consensus 107 ~~N~l~~~~------------------------~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (487)
T 3oja_A 107 ANNNISRVS------------------------C---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (487)
T ss_dssp CSSCCCCEE------------------------E---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEE
T ss_pred cCCcCCCCC------------------------c---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCc
Confidence 777665422 1 1346789999999999998898999999999999999999998
Q ss_pred CCcccc-cCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCC
Q 002875 202 VPWEFS-RVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 280 (872)
Q Consensus 202 ~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~ 280 (872)
.|..+. .+++|++|+|++|.+++.. .+..+++|+.|++++|.+++..| .+..+++|+.|++++|.+++ +|..+..
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred ChHHHhhhCCcccEEecCCCcccccc--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhcc
Confidence 888776 7999999999999998763 34469999999999999997544 58899999999999999996 6778999
Q ss_pred CCCCcEEecCCCeee-ecCCCCCCCCCceeEEEcC
Q 002875 281 NSKLRWVDVSTNNFN-GSIPPDICSGGVLFKLILF 314 (872)
Q Consensus 281 ~~~L~~L~ls~n~l~-~~~p~~~~~~~~l~~l~l~ 314 (872)
+++|+.|++++|.+. +.+|..+.....+..+.+.
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 999999999999997 5555555555555555553
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=6.5e-24 Score=223.02 Aligned_cols=222 Identities=23% Similarity=0.248 Sum_probs=147.3
Q ss_pred EEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCc
Q 002875 22 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 101 (872)
Q Consensus 22 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~ 101 (872)
..+-++..+. .+|..+. ++|++|++++|.+.+..+..|..+++|++|++++|.+.+..+..|.++++|++|+|++|.
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4455555554 3344443 467788888887777666677777888888888887776666677777888888888887
Q ss_pred ccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcc-cCCccccCCCCCcEEEeecCCCcccCCc
Q 002875 102 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPK 180 (872)
Q Consensus 102 ~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~-~~p~~~~~l~~L~~L~ls~n~l~~~~p~ 180 (872)
+.+..+..|.++++|++|++++|.+.+..+..++.+++|++|++++|.+.+ .+|..+.++++|++|++++|.+.+..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 777777777778888888888777776655566666666666666666554 2466666666777777777766665555
Q ss_pred cCcCCCCCC----EEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCC
Q 002875 181 ELSNLTKLE----SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 247 (872)
Q Consensus 181 ~l~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 247 (872)
.+..+++|+ +|++++|.+.+..+..+.. .+|++|++++|++++..+..|..+++|+.|++++|++.
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred HhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 555544444 6666666666555444433 35666666666666555555566666666666666655
No 321
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=2.9e-23 Score=240.05 Aligned_cols=268 Identities=23% Similarity=0.333 Sum_probs=184.3
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
.++.|++++|.++ .+|..+. ++|++|+|++|.|+. +|. .+++|++|||++|.+++ +|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 5889999999987 4566565 789999999998874 444 57888889998888874 554 67888888888
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccC
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 178 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 178 (872)
+|.+++ +|. .+++|+.|++++|.++. +|.. +++|++|++++|.+++ +
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---------------------------l~~L~~L~Ls~N~l~~-l 156 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---------------------------PPGLQELSVSDNQLAS-L 156 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---------------------------CTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---------------------------CCCCCEEECcCCcCCC-c
Confidence 888875 444 56788888888887764 2321 2445555555555553 2
Q ss_pred CccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCC
Q 002875 179 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 258 (872)
Q Consensus 179 p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 258 (872)
|. .+++|+.|++++|.+++. | ..+++|+.|++++|.+++ +|. .+++|+.|++++|.++. +|. .++
T Consensus 157 ~~---~~~~L~~L~L~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~~---~~~ 221 (622)
T 3g06_A 157 PA---LPSELCKLWAYNNQLTSL-P---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNRLTS-LPA---LPS 221 (622)
T ss_dssp CC---CCTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS-CCC---CCT
T ss_pred CC---ccCCCCEEECCCCCCCCC-c---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCcccc-cCC---CCC
Confidence 32 234566666666666643 2 345667777777777764 332 23567777777777763 332 236
Q ss_pred CcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcC
Q 002875 259 SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLE 338 (872)
Q Consensus 259 ~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~ 338 (872)
+|+.|++++|.+++ +| ..+++|+.|++++|.++ .+|. .+++|+.|+++
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---------------------------~~~~L~~L~Ls 269 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---------------------------LPSGLLSLSVY 269 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---------------------------CCTTCCEEECC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---------------------------ccccCcEEeCC
Confidence 77777777777764 44 33466777777777665 2221 34678889999
Q ss_pred CCccccccCccCCCCCCCcEEEcCCCcCCCCCCchhhhhc
Q 002875 339 DNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQAS 378 (872)
Q Consensus 339 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 378 (872)
+|+++ .+|..+..+++|+.|++++|.+++..|..+..++
T Consensus 270 ~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 270 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp SSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 99888 5677888899999999999999877776666554
No 322
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=3.1e-23 Score=239.84 Aligned_cols=256 Identities=25% Similarity=0.319 Sum_probs=172.7
Q ss_pred CCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCc
Q 002875 43 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 122 (872)
Q Consensus 43 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 122 (872)
++++|++++|.++ .+|..+. ++|++|++++|.++. +|. .+++|++|+|++|.+++ +|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 4667777777766 3444443 566666666666663 343 35666666666666653 333 45566666666
Q ss_pred cCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccC
Q 002875 123 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV 202 (872)
Q Consensus 123 ~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 202 (872)
+|.+++ +|. .+++|+.|++++|.+++ +|.. +++|++|++++|++++.
T Consensus 110 ~N~l~~-------------------------l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l- 156 (622)
T 3g06_A 110 SNPLTH-------------------------LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL- 156 (622)
T ss_dssp SCCCCC-------------------------CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-
T ss_pred CCcCCC-------------------------CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-
Confidence 665542 121 34567777788777774 4443 47788888888888754
Q ss_pred CcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCC
Q 002875 203 PWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNS 282 (872)
Q Consensus 203 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~ 282 (872)
|. .+++|+.|++++|.++. +| ..+++|+.|++++|.+++ +|. .+++|+.|++++|.++. +|.. .+
T Consensus 157 ~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~~~---~~ 221 (622)
T 3g06_A 157 PA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNRLTS-LPAL---PS 221 (622)
T ss_dssp CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS-CCCC---CT
T ss_pred CC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCcccc-cCCC---CC
Confidence 32 34678888888888875 44 446778888888888774 333 23677777777777763 3332 35
Q ss_pred CCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcC
Q 002875 283 KLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLS 362 (872)
Q Consensus 283 ~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 362 (872)
+|+.|++++|.++ + +| ..+++|+.|++++|+++. +|. .+++|+.|+++
T Consensus 222 ~L~~L~Ls~N~L~------------------------~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls 269 (622)
T 3g06_A 222 GLKELIVSGNRLT------------------------S-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVY 269 (622)
T ss_dssp TCCEEECCSSCCS------------------------C-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCCEEEccCCccC------------------------c-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCC
Confidence 5666666666554 2 12 245789999999999985 444 67899999999
Q ss_pred CCcCCCCCCchhhhhcccccccccCCCC
Q 002875 363 RNGFTGGIPTDINQASKLEYFNVSNNPK 390 (872)
Q Consensus 363 ~N~l~~~~~~~~~~l~~L~~L~ls~n~~ 390 (872)
+|+++ .+|..+..+++|+.|++++|+.
T Consensus 270 ~N~L~-~lp~~l~~l~~L~~L~L~~N~l 296 (622)
T 3g06_A 270 RNQLT-RLPESLIHLSSETTVNLEGNPL 296 (622)
T ss_dssp SSCCC-SCCGGGGGSCTTCEEECCSCCC
T ss_pred CCCCC-cCCHHHhhccccCEEEecCCCC
Confidence 99999 6788899999999999999964
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=6.4e-24 Score=223.06 Aligned_cols=208 Identities=24% Similarity=0.237 Sum_probs=188.5
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
.+.|++|+|++|.++++.+..|.++++|++|+|++|.+.+..+..|..+++|++|++++|.+.+..+..|.++++|++|+
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 35799999999999999888999999999999999999988888999999999999999999988888999999999999
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCcCCcc-CCccCCCCCCCCEEEccCccCcccCCccccCCCCCc----EEEeec
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ----YLDIAG 171 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~----~L~ls~ 171 (872)
+++|.+.+..+..|+++++|++|++++|.+++. +|..++.+++|++|++++|.+.+..+..+..+.+|+ .|++++
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 999999988777899999999999999999874 589999999999999999999887777777666666 899999
Q ss_pred CCCcccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCc
Q 002875 172 ANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP 225 (872)
Q Consensus 172 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 225 (872)
|.+.+..+..+. ..+|+.|++++|++++..+..|..+++|++|++++|++...
T Consensus 187 n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 187 NPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp SCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred CcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 999976666555 45899999999999988877789999999999999998753
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=9.8e-23 Score=213.04 Aligned_cols=203 Identities=23% Similarity=0.298 Sum_probs=146.2
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
..+.++++++.++. +|..+. ++|++|+|++|.+.+..+..|..+++|++|++++|.++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 56788888888875 455454 578888888888887777778888888888888888876655567788888888888
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccC
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 178 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 178 (872)
+|.+.+..+..|.++++|++|++++|.+++..+..|+ ++++|++|++++|.+.+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~------------------------~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFD------------------------SLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTT------------------------TCTTCCEEECCSSCCCCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhC------------------------cCcCCCEEECCCCcCCccC
Confidence 8888776667778888888888888877665544444 4555555555556555544
Q ss_pred CccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCC
Q 002875 179 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 248 (872)
Q Consensus 179 p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 248 (872)
+..+..+++|+.|++++|.+.+..+..|..+++|++|++++|++++..+..|..+++|+.|++++|++..
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 4556666777777777777766666666777777777777777776555667777777777777777653
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=1.7e-22 Score=211.23 Aligned_cols=203 Identities=25% Similarity=0.288 Sum_probs=157.9
Q ss_pred CCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCc
Q 002875 43 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 122 (872)
Q Consensus 43 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 122 (872)
+.+++++++|.++. +|..+. ++|+.|++++|.+.+..+..|.++++|++|+|++|.+....+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 45667777777663 444332 456677777776665555566666666666666666665555555666666666666
Q ss_pred cCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccC
Q 002875 123 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV 202 (872)
Q Consensus 123 ~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 202 (872)
+|.++.. .+..+.++++|++|++++|.+.+..+..+..+++|++|++++|.+.+..
T Consensus 94 ~n~l~~~------------------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 94 DNKLQAL------------------------PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp SSCCCCC------------------------CTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcCCcC------------------------CHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 6665433 3344566777888888888888878888999999999999999999888
Q ss_pred CcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccc
Q 002875 203 PWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 272 (872)
Q Consensus 203 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~ 272 (872)
+..|..+++|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|.+..
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 8789999999999999999998878889999999999999999998777778999999999999998864
No 326
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=2.7e-24 Score=245.90 Aligned_cols=178 Identities=13% Similarity=0.129 Sum_probs=139.2
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccch---------hHHHHHHHHHHhhccCCCCceeEEEEEecCCeeEEEE
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 682 (872)
..+.||+|+||.||+|. ..++.+|+|+...... ..+.+.+|++++++++|||||++..++...+..|+||
T Consensus 340 ~~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 46789999999999994 4688899998643211 1345789999999999999997666766777889999
Q ss_pred cccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCC---
Q 002875 683 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 759 (872)
Q Consensus 683 ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~--- 759 (872)
|||++|+|.+++.. +..++.|+++||+|||+. +|+||||||+|||++. .+||+|||+++.......
T Consensus 419 E~~~ggsL~~~l~~------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 419 SYINGKLAKDVIED------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp ECCCSEEHHHHSTT------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred ECCCCCCHHHHHHH------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 99999999999986 568999999999999999 9999999999999998 999999999986543211
Q ss_pred ------CCcccccccCchhhhcc--cCCcccccchhHHHHHHHHHcCCCC
Q 002875 760 ------SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRL 801 (872)
Q Consensus 760 ------~~~~~~~~~~~~e~~~~--~~~~~~~Dv~S~Gvil~el~tg~~p 801 (872)
....++.+|++||++.. ..|+..+|+||..+-..|.+.++.+
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 12236677888898875 4577778999999888888776544
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.1e-23 Score=220.40 Aligned_cols=228 Identities=25% Similarity=0.299 Sum_probs=158.7
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
.+..+++..+.+... .....+++|+.|++++|.+... ..+..+++|++|++++|.+.+. ..+..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 455566666666543 3355677888888888877632 3477788888888888877642 367777888888888
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccC
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 178 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 178 (872)
+|.+.+..+..|+++++|++|++++|.+++..+..++ ++++|++|++++|.+.+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~------------------------~l~~L~~L~L~~n~l~~~~ 149 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFD------------------------KLTNLTYLNLAHNQLQSLP 149 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT------------------------TCTTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhc------------------------cCCCCCEEECCCCccCccC
Confidence 8877776666677778888888877777654444444 4555555566666665555
Q ss_pred CccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCC
Q 002875 179 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 258 (872)
Q Consensus 179 p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 258 (872)
+..+..+++|+.|++++|++++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|++.+ .++
T Consensus 150 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~ 222 (272)
T 3rfs_A 150 KGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCP 222 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTT
T ss_pred HHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCc
Confidence 5556666777777777777776666666777777777777777777666667777788888887777653 345
Q ss_pred CcceeecccccccccCCccCCCCCC
Q 002875 259 SLEILFIWNNYFSGSLPENLGRNSK 283 (872)
Q Consensus 259 ~L~~L~l~~n~l~~~~p~~~~~~~~ 283 (872)
+|+.|+++.|.++|.+|..++.+..
T Consensus 223 ~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 223 GIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred HHHHHHHHHHhCCCcccCcccccCC
Confidence 7788888888888888877766553
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=6.4e-23 Score=214.62 Aligned_cols=226 Identities=22% Similarity=0.279 Sum_probs=174.9
Q ss_pred CCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCcc
Q 002875 44 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 123 (872)
Q Consensus 44 L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 123 (872)
+..+++..+.+... ..+..+++|+.|++++|.+.. + ..+..+++|++|+|++|.+.+. ..+..+++|++|++++
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTT
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCC
Confidence 33445555555433 234556667777777776652 2 2466666777777777666542 3566666666666666
Q ss_pred CcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCC
Q 002875 124 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP 203 (872)
Q Consensus 124 n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 203 (872)
|.+++. .+..+.++++|++|++++|.+.+..+..+..+++|++|++++|++++..+
T Consensus 95 n~l~~~------------------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 150 (272)
T 3rfs_A 95 NQLQSL------------------------PNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPK 150 (272)
T ss_dssp SCCCCC------------------------CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCcc------------------------ChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCH
Confidence 666543 33445667778888888888887777788999999999999999998888
Q ss_pred cccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCC
Q 002875 204 WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSK 283 (872)
Q Consensus 204 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~ 283 (872)
..|..+++|++|++++|++++..+..|+.+++|+.|++++|++.+..+..+..+++|+.|++++|.+.+. ++.
T Consensus 151 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~ 223 (272)
T 3rfs_A 151 GVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPG 223 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTT
T ss_pred HHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcH
Confidence 8889999999999999999988888899999999999999999988888899999999999999988754 446
Q ss_pred CcEEecCCCeeeecCCCCCCCCC
Q 002875 284 LRWVDVSTNNFNGSIPPDICSGG 306 (872)
Q Consensus 284 L~~L~ls~n~l~~~~p~~~~~~~ 306 (872)
+++++++.|.+.|.+|..++...
T Consensus 224 l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 224 IRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp THHHHHHHHHTGGGBBCTTSCBC
T ss_pred HHHHHHHHHhCCCcccCcccccC
Confidence 89999999999999998876543
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=9e-22 Score=207.45 Aligned_cols=200 Identities=21% Similarity=0.196 Sum_probs=102.2
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
++.++.+++++|.++.+ |..+. +++++|+|++|.+.+..+..|..+++|++|++++|.+++..+ ...+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEE
T ss_pred cCCccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEE
Confidence 44555555555555533 33332 455555555555555555555555555555555555553222 14455555555
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcc
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 176 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~ 176 (872)
|++|.+. .+|..+..+++|++|++++|.+++..+ ..+.++++|++|++++|.+.+
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~------------------------~~~~~l~~L~~L~L~~N~l~~ 138 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPL------------------------GALRGLGELQELYLKGNELKT 138 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCS------------------------STTTTCTTCCEEECTTSCCCC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCH------------------------HHHcCCCCCCEEECCCCCCCc
Confidence 5555554 344445555555555555555443333 333344444444555555544
Q ss_pred cCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCC
Q 002875 177 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 247 (872)
Q Consensus 177 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 247 (872)
..+..+..+++|+.|+|++|+++...+..|..+++|++|+|++|+++ .+|..+..+.+|+.+++++|++.
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 44444455555555555555555444444555555555555555555 34444445555555555555543
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=9.4e-22 Score=207.31 Aligned_cols=177 Identities=21% Similarity=0.184 Sum_probs=133.6
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
.+.++.|+|++|.|+++.+..|.++++|++|+|++|.|.+..+ ...+++|++|++++|.+. .+|..+..+++|++|+
T Consensus 30 ~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 30 PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 4689999999999999999999999999999999999987544 389999999999999998 6788899999999999
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcc
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 176 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~ 176 (872)
|++|.+++..|..|.++++|++|+|++|.++...+..|..+++|+.|++++|.+....+..+.++++|++|++++|.++
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~- 185 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY- 185 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-
Confidence 9999999888889999999999999999998766666666666666665555554333333344444444444444444
Q ss_pred cCCccCcCCCCCCEEEccCCC
Q 002875 177 SIPKELSNLTKLESLFLFRNQ 197 (872)
Q Consensus 177 ~~p~~l~~l~~L~~L~L~~n~ 197 (872)
.+|..+..+++|+.|++++|.
T Consensus 186 ~ip~~~~~~~~L~~l~L~~Np 206 (290)
T 1p9a_G 186 TIPKGFFGSHLLPFAFLHGNP 206 (290)
T ss_dssp CCCTTTTTTCCCSEEECCSCC
T ss_pred ccChhhcccccCCeEEeCCCC
Confidence 233333333344444444333
No 331
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=5.5e-22 Score=203.35 Aligned_cols=196 Identities=15% Similarity=0.169 Sum_probs=136.1
Q ss_pred CCCEEECcCCcCcccCCccccCCCCCcEEECcCCc-CccccCccccCCCCCCEEEccC-CcccccCCcccCCCCCCcEee
Q 002875 43 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQLEHLKVLNLAG-SYFSGPIPSQFGSFKSLEFLH 120 (872)
Q Consensus 43 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~-l~~~~p~~~~~L~~L~~L~L~~-n~~~~~~p~~~~~l~~L~~L~ 120 (872)
+|++|++++|+++++.+..|..+++|++|++++|. ++.+.+..|.++++|++|++++ |.+.+..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 66677777777666666666667777777777765 6655555666677777777776 666665556666777777777
Q ss_pred CccCcCCccCCccCCCCCCCC---EEEccCc-cCcccCCccccCCCCCc-EEEeecCCCcccCCccCcCCCCCCEEEccC
Q 002875 121 LAGNLLNDQIPAELGMLKTVT---HMEIGYN-FYQGNIPWQLGNMSEVQ-YLDIAGANLSGSIPKELSNLTKLESLFLFR 195 (872)
Q Consensus 121 L~~n~l~~~~p~~l~~L~~L~---~L~l~~n-~~~~~~p~~~~~l~~L~-~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~ 195 (872)
+++|.+++ +|. +..+++|+ .|++++| .+.+..+..+.++++|+ .|++++|.+....+..+.. ++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 77776655 443 66666666 7777777 66655555677778888 8888888887433334444 7888888888
Q ss_pred CC-CcccCCcccccC-CCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccc
Q 002875 196 NQ-LAGQVPWEFSRV-TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 244 (872)
Q Consensus 196 n~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 244 (872)
|+ ++...+..|..+ ++|+.|++++|+++...+. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 84 887777778888 8888888888888754333 5677888888765
No 332
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.87 E-value=5.2e-26 Score=267.18 Aligned_cols=431 Identities=15% Similarity=0.105 Sum_probs=236.7
Q ss_pred cccCCCCCCEEECcCCcCcc---cCCc------------cccCCCCCcEEECcCCcCccccCcccc-CCCCCCEEEccCC
Q 002875 37 EIFNLTSLISLDISRNNFSG---HFPG------------GIQSLRNLLVLDAFSNSFSGSVPAEIS-QLEHLKVLNLAGS 100 (872)
Q Consensus 37 ~~~~l~~L~~L~Ls~N~i~~---~~~~------------~~~~l~~L~~LdL~~n~l~~~~p~~~~-~L~~L~~L~L~~n 100 (872)
.+..+++|++|+++++.... ..|. .+..+++|++|++++|.+++..+..+. .+++|++|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 34556677777777664211 1111 123566777777777776665555554 5677777777777
Q ss_pred -ccccc-CCcccCCCCCCcEeeCccCcCCccCCccC----CCCCCCCEEEccCcc--Ccc-cCCccccCCCCCcEEEeec
Q 002875 101 -YFSGP-IPSQFGSFKSLEFLHLAGNLLNDQIPAEL----GMLKTVTHMEIGYNF--YQG-NIPWQLGNMSEVQYLDIAG 171 (872)
Q Consensus 101 -~~~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~l----~~L~~L~~L~l~~n~--~~~-~~p~~~~~l~~L~~L~ls~ 171 (872)
.+... ++..+.++++|++|+|++|.+++..+..+ ..+++|+.|++++|. +.. .++....++++|++|++++
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~ 220 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNR 220 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCT
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCC
Confidence 33321 33334467777777777777655433333 355677777777664 110 1112223457778888877
Q ss_pred CCCcccCCccCcCCCCCCEEEccCCC-------CcccCCcccccCCCCCEE-eCcCCCCcCcCCccccCCCCCCEEEccc
Q 002875 172 ANLSGSIPKELSNLTKLESLFLFRNQ-------LAGQVPWEFSRVTTLKSL-DLSDNRLSGPIPESFADLKNLRLLSLMY 243 (872)
Q Consensus 172 n~l~~~~p~~l~~l~~L~~L~L~~n~-------l~~~~~~~~~~l~~L~~L-~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 243 (872)
|...+.++..+..+++|+.|+++.+. +.+. +..+.++++|+.| .+.+... ..++..+..+++|+.|++++
T Consensus 221 ~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l-~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~ 298 (594)
T 2p1m_B 221 AVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGL-SVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSY 298 (594)
T ss_dssp TSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHH-HHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTT
T ss_pred CCcHHHHHHHHhcCCcceEcccccccCccchhhHHHH-HHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccC
Confidence 73323366666677777777754432 2222 2356677777777 4443322 23344445667788888887
Q ss_pred ccCCCCC-CccccCCCCcceeecccccccc-cCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCC
Q 002875 244 NEMSGTV-PESLVQLPSLEILFIWNNYFSG-SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGS 321 (872)
Q Consensus 244 n~l~~~~-p~~l~~l~~L~~L~l~~n~l~~-~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~ 321 (872)
|.+.+.. ...+..+++|+.|++++| +.. .++.....+++|+.|+++++.-.|. ...+.++..
T Consensus 299 ~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~---------------~~~~~l~~~ 362 (594)
T 2p1m_B 299 ATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVM---------------EPNVALTEQ 362 (594)
T ss_dssp CCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCS---------------SCSSCCCHH
T ss_pred CCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCccccc---------------ccCCCCCHH
Confidence 7755322 222456778888888776 332 1222222456677777743210000 000111100
Q ss_pred CCCCC-CCCCCCcEEEcCCCccccccCccCC-CCCCCcEEEcC--C----CcCCCCCC-----chhhhhcccccccccCC
Q 002875 322 LSPSL-SNCSSLVRLRLEDNSFSGEIPLKFS-QLPDINYIDLS--R----NGFTGGIP-----TDINQASKLEYFNVSNN 388 (872)
Q Consensus 322 ~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~~~-----~~~~~l~~L~~L~ls~n 388 (872)
....+ .++++|+.|.+..|.+++.....+. .+++|+.|+++ + |.++.... ..+..+++|+.|+++++
T Consensus 363 ~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~~ 442 (594)
T 2p1m_B 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGL 442 (594)
T ss_dssp HHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCSS
T ss_pred HHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecCc
Confidence 00011 2367777777777777655444443 46777777777 3 44442211 11455677888888662
Q ss_pred CCCCCcCCcccC-CCcccccccccccccCCCCCCCCcCCccceeeccccccCCCCCCcc-cccccCcEEEccCccceecc
Q 002875 389 PKLGGMIPAQTW-SLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV-SNCVELERIDLANNKLIGSI 466 (872)
Q Consensus 389 ~~l~~~~~~~~~-~l~~L~~L~l~~~~l~~~~~~~~~~~~l~~l~l~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~ 466 (872)
+.......+. .+++|+.|++++|.+++. ....+ .++++|++|+|++|.+++..
T Consensus 443 --l~~~~~~~l~~~~~~L~~L~L~~~~i~~~-----------------------~~~~l~~~~~~L~~L~L~~n~~~~~~ 497 (594)
T 2p1m_B 443 --LTDKVFEYIGTYAKKMEMLSVAFAGDSDL-----------------------GMHHVLSGCDSLRKLEIRDCPFGDKA 497 (594)
T ss_dssp --CCHHHHHHHHHHCTTCCEEEEESCCSSHH-----------------------HHHHHHHHCTTCCEEEEESCSCCHHH
T ss_pred --ccHHHHHHHHHhchhccEeeccCCCCcHH-----------------------HHHHHHhcCCCcCEEECcCCCCcHHH
Confidence 2111111222 256777777777654321 11111 45677888888888875443
Q ss_pred ch-hccCCCCCCEEECCCCccccccCccc-cCCCCCcEEECcCCee
Q 002875 467 PE-VLARLPVLGVLDLSHNSLSGQIPAKF-GSCSSLTVLNVSFNDI 510 (872)
Q Consensus 467 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~ls~N~l 510 (872)
.. ....+++|+.|++++|+++......+ ..++.|+...+..+..
T Consensus 498 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 498 LLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 33 34457788888888888754433334 4567777666665543
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=1.1e-21 Score=201.14 Aligned_cols=196 Identities=15% Similarity=0.185 Sum_probs=120.8
Q ss_pred CCcEEECcCCcCccccCccccCCCCCCEEEccCCc-ccccCCcccCCCCCCcEeeCcc-CcCCccCCccCCCCCCCCEEE
Q 002875 67 NLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY-FSGPIPSQFGSFKSLEFLHLAG-NLLNDQIPAELGMLKTVTHME 144 (872)
Q Consensus 67 ~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~-~~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~l~~L~~L~~L~ 144 (872)
+|++|++++|.+++..+..|.++++|++|++++|. +....+..|.++++|++|++++ |.++...+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666665555566666666666666665 6555555666666666666666 666655556666666666666
Q ss_pred ccCccCcccCCccccCCCCCc---EEEeecC-CCcccCCccCcCCCCCC-EEEccCCCCcccCCcccccCCCCCEEeCcC
Q 002875 145 IGYNFYQGNIPWQLGNMSEVQ---YLDIAGA-NLSGSIPKELSNLTKLE-SLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 219 (872)
Q Consensus 145 l~~n~~~~~~p~~~~~l~~L~---~L~ls~n-~l~~~~p~~l~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 219 (872)
+++|.+.+ +|. +..+++|+ +|++++| .+.+..+..|..+++|+ +|++++|+++...+..|.. ++|++|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 66666554 443 55555555 6666666 66655555566666666 6666666666444444444 5666666666
Q ss_pred CC-CcCcCCccccCC-CCCCEEEcccccCCCCCCccccCCCCcceeecccc
Q 002875 220 NR-LSGPIPESFADL-KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNN 268 (872)
Q Consensus 220 N~-l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n 268 (872)
|+ ++...+..|..+ ++|+.|++++|++++..+. .+++|+.|++.++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 63 665555566666 6666666666666643222 4556666666544
No 334
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.87 E-value=3.5e-25 Score=260.07 Aligned_cols=395 Identities=15% Similarity=0.142 Sum_probs=245.2
Q ss_pred CCCCcEEECCCCCCcc---cCCc------------cccCCCCCCEEECcCCcCcccCCcccc-CCCCCcEEECcCC-cCc
Q 002875 17 FNELVDLNLSHNSFSG---QFPV------------EIFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSN-SFS 79 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~---~~~~------------~~~~l~~L~~L~Ls~N~i~~~~~~~~~-~l~~L~~LdL~~n-~l~ 79 (872)
++.|+.|+|+++.... ..|. .+..+++|++|+|++|.+.+..+..+. .+++|++|++++| .++
T Consensus 65 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~ 144 (594)
T 2p1m_B 65 FPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFS 144 (594)
T ss_dssp CTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEE
T ss_pred CCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCC
Confidence 7899999999976321 1121 124688999999999998876666664 7899999999998 454
Q ss_pred cc-cCccccCCCCCCEEEccCCcccccCCccc----CCCCCCcEeeCccCc--CCc-cCCccCCCCCCCCEEEccCccCc
Q 002875 80 GS-VPAEISQLEHLKVLNLAGSYFSGPIPSQF----GSFKSLEFLHLAGNL--LND-QIPAELGMLKTVTHMEIGYNFYQ 151 (872)
Q Consensus 80 ~~-~p~~~~~L~~L~~L~L~~n~~~~~~p~~~----~~l~~L~~L~L~~n~--l~~-~~p~~l~~L~~L~~L~l~~n~~~ 151 (872)
.. ++..+.++++|++|+|++|.+++..+..+ ..+++|++|++++|. +.. .++..+..+++|++|++++|...
T Consensus 145 ~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~ 224 (594)
T 2p1m_B 145 TDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPL 224 (594)
T ss_dssp HHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCH
T ss_pred HHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcH
Confidence 32 34445689999999999999776544433 467799999999986 221 11112345699999999998544
Q ss_pred ccCCccccCCCCCcEEEeecCC-------CcccCCccCcCCCCCCEE-EccCCCCcccCCcccccCCCCCEEeCcCCCCc
Q 002875 152 GNIPWQLGNMSEVQYLDIAGAN-------LSGSIPKELSNLTKLESL-FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS 223 (872)
Q Consensus 152 ~~~p~~~~~l~~L~~L~ls~n~-------l~~~~p~~l~~l~~L~~L-~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 223 (872)
+.+|..+.++++|+.|+++.+. +.+ ++..+.++++|+.| .+..... ..++..+..+++|++|++++|.++
T Consensus 225 ~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~ 302 (594)
T 2p1m_B 225 EKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQ 302 (594)
T ss_dssp HHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCC
T ss_pred HHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCC
Confidence 4477778889999999976553 332 34467888999998 4443322 234444557889999999999876
Q ss_pred CcC-CccccCCCCCCEEEcccccCCCC-CCccccCCCCcceeeccc---------ccccccCCccC-CCCCCCcEEecCC
Q 002875 224 GPI-PESFADLKNLRLLSLMYNEMSGT-VPESLVQLPSLEILFIWN---------NYFSGSLPENL-GRNSKLRWVDVST 291 (872)
Q Consensus 224 ~~~-~~~~~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~l~~---------n~l~~~~p~~~-~~~~~L~~L~ls~ 291 (872)
... ...+..+++|+.|++++| +... ++.....+++|+.|++++ +.+++.....+ ..+++|+.|+++.
T Consensus 303 ~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~ 381 (594)
T 2p1m_B 303 SYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFC 381 (594)
T ss_dssp HHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhc
Confidence 432 233568899999999988 3321 222233578999999844 34433211112 2367788888877
Q ss_pred CeeeecCCCCCC-CCCceeEEEcC--C----CcCCCCCC-----CCCCCCCCCcEEEcCCCccccccCccCCC-CCCCcE
Q 002875 292 NNFNGSIPPDIC-SGGVLFKLILF--S----NNFTGSLS-----PSLSNCSSLVRLRLEDNSFSGEIPLKFSQ-LPDINY 358 (872)
Q Consensus 292 n~l~~~~p~~~~-~~~~l~~l~l~--~----n~~~~~~~-----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~ 358 (872)
|.+++..+..+. ..++|+.|.+. + +.++.... ..+..+++|+.|++++ .+++.....+.. +++|+.
T Consensus 382 ~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~ 460 (594)
T 2p1m_B 382 RQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEM 460 (594)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCE
T ss_pred CCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccE
Confidence 777643322221 23456666665 2 23331110 1134566777777765 444433333333 566777
Q ss_pred EEcCCCcCCCCCCchh-hhhcccccccccCCCCCCCcCCcccCCCccccccccccccc
Q 002875 359 IDLSRNGFTGGIPTDI-NQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNI 415 (872)
Q Consensus 359 L~Ls~N~l~~~~~~~~-~~l~~L~~L~ls~n~~l~~~~~~~~~~l~~L~~L~l~~~~l 415 (872)
|++++|.+++.....+ ..+++|++|++++|+............+++|+.|++++|.+
T Consensus 461 L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 461 LSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp EEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred eeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 7777776643322222 34566666666666431111111222345555555555543
No 335
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=3.8e-23 Score=224.07 Aligned_cols=221 Identities=18% Similarity=0.225 Sum_probs=130.5
Q ss_pred CcEEECCCCCCcccCCccccCC--CCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccc-cCccccCCCCCCEEE
Q 002875 20 LVDLNLSHNSFSGQFPVEIFNL--TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS-VPAEISQLEHLKVLN 96 (872)
Q Consensus 20 L~~L~L~~n~i~~~~~~~~~~l--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~-~p~~~~~L~~L~~L~ 96 (872)
++.+++++|.+. +..+..+ +++++|++++|.+.+..+. +..+++|++|++++|.+.+. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 667777777665 4555555 7777777777777765554 44677777777777776644 666677777777777
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccC-cCCc-cCCccCCCCCCCCEEEccCc-cCccc-CCccccCCC-CCcEEEeec
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGN-LLND-QIPAELGMLKTVTHMEIGYN-FYQGN-IPWQLGNMS-EVQYLDIAG 171 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n-~l~~-~~p~~l~~L~~L~~L~l~~n-~~~~~-~p~~~~~l~-~L~~L~ls~ 171 (872)
|++|.+.+..+..|+.+++|++|++++| .+++ .++..+..+++|++|++++| .+.+. ++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 7777776666667777777777777777 4543 24444555666666666665 44432 344455555 566666665
Q ss_pred C--CCc-ccCCccCcCCCCCCEEEccCCC-CcccCCcccccCCCCCEEeCcCCC-CcCcCCccccCCCCCCEEEcccc
Q 002875 172 A--NLS-GSIPKELSNLTKLESLFLFRNQ-LAGQVPWEFSRVTTLKSLDLSDNR-LSGPIPESFADLKNLRLLSLMYN 244 (872)
Q Consensus 172 n--~l~-~~~p~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~n 244 (872)
| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......+..+++|+.|++++|
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 5 333 2334444455555555555555 444444445555555555555553 11111113445555555555555
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=3.7e-23 Score=226.14 Aligned_cols=256 Identities=20% Similarity=0.187 Sum_probs=145.3
Q ss_pred EEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCC----ccccCCC-CCcEEECcCCcCccccCccccCC-----CC
Q 002875 22 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP----GGIQSLR-NLLVLDAFSNSFSGSVPAEISQL-----EH 91 (872)
Q Consensus 22 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~----~~~~~l~-~L~~LdL~~n~l~~~~p~~~~~L-----~~ 91 (872)
.++|++|.+++.+|..+...++|++|+|++|.+.+..+ +.|..++ +|++|+|++|.+....+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35788888888777666666668888888888876666 6777787 78888888888887767666654 88
Q ss_pred CCEEEccCCcccccCCcccC----CC-CCCcEeeCccCcCCccCCccCC----C-CCCCCEEEccCccCcccCCccccCC
Q 002875 92 LKVLNLAGSYFSGPIPSQFG----SF-KSLEFLHLAGNLLNDQIPAELG----M-LKTVTHMEIGYNFYQGNIPWQLGNM 161 (872)
Q Consensus 92 L~~L~L~~n~~~~~~p~~~~----~l-~~L~~L~L~~n~l~~~~p~~l~----~-L~~L~~L~l~~n~~~~~~p~~~~~l 161 (872)
|++|+|++|.+.+..+..+. .+ ++|++|+|++|.+++..+..+. . .++|++|++++|.+....+.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~----- 156 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSD----- 156 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHH-----
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHH-----
Confidence 88888888888766555433 33 7888888888887655443322 2 13455555555544321111
Q ss_pred CCCcEEEeecCCCcccCCccCcCCC-CCCEEEccCCCCcccCCcccc----cC-CCCCEEeCcCCCCcCc----CCcccc
Q 002875 162 SEVQYLDIAGANLSGSIPKELSNLT-KLESLFLFRNQLAGQVPWEFS----RV-TTLKSLDLSDNRLSGP----IPESFA 231 (872)
Q Consensus 162 ~~L~~L~ls~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~~~~~~----~l-~~L~~L~L~~N~l~~~----~~~~~~ 231 (872)
.++..+..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|.++.. ++..+.
T Consensus 157 ---------------~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 157 ---------------ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp ---------------HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred ---------------HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 1111222222 444444444444433332222 22 3455555555554432 122232
Q ss_pred C-CCCCCEEEcccccCCCCCC----ccccCCCCcceeeccccccccc-------CCccCCCCCCCcEEecCCCeeeec
Q 002875 232 D-LKNLRLLSLMYNEMSGTVP----ESLVQLPSLEILFIWNNYFSGS-------LPENLGRNSKLRWVDVSTNNFNGS 297 (872)
Q Consensus 232 ~-l~~L~~L~L~~n~l~~~~p----~~l~~l~~L~~L~l~~n~l~~~-------~p~~~~~~~~L~~L~ls~n~l~~~ 297 (872)
. .++|+.|++++|.+.+..+ ..+..+++|+.|++++|.+.+. ++..+..+++|+.||+++|.+.+.
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 2 2355555555555544322 1234445555555555553221 233455666677777777766543
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=6.3e-22 Score=211.43 Aligned_cols=226 Identities=19% Similarity=0.185 Sum_probs=164.8
Q ss_pred CCCCCEEECcCCcCcccC-Cc--cccCCCCCcEEECcCCcCccccCccc--cCCCCCCEEEccCCcccccCC----cccC
Q 002875 41 LTSLISLDISRNNFSGHF-PG--GIQSLRNLLVLDAFSNSFSGSVPAEI--SQLEHLKVLNLAGSYFSGPIP----SQFG 111 (872)
Q Consensus 41 l~~L~~L~Ls~N~i~~~~-~~--~~~~l~~L~~LdL~~n~l~~~~p~~~--~~L~~L~~L~L~~n~~~~~~p----~~~~ 111 (872)
...++.|.+.++.+.... .. .+..+++|++|++++|.+.+..|..+ ..+++|++|+|++|.+.+..+ ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 345677777776654211 00 12234568888888888887777777 778888888888888776444 3455
Q ss_pred CCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCccc--C--CccccCCCCCcEEEeecCCCcccCCc----cCc
Q 002875 112 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN--I--PWQLGNMSEVQYLDIAGANLSGSIPK----ELS 183 (872)
Q Consensus 112 ~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~--~--p~~~~~l~~L~~L~ls~n~l~~~~p~----~l~ 183 (872)
.+++|++|+|++|.+.+..+..++.+++|++|++++|.+.+. + +..+..+++|++|++++|.++. ++. .+.
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~ 221 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAA 221 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHh
Confidence 678888888888888777777888888888888888876542 1 2334678888888898888863 222 246
Q ss_pred CCCCCCEEEccCCCCcccCCcccccC---CCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCc
Q 002875 184 NLTKLESLFLFRNQLAGQVPWEFSRV---TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSL 260 (872)
Q Consensus 184 ~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 260 (872)
.+++|++|+|++|++.+..|..+..+ ++|++|++++|+++ .+|..+. ++|+.|++++|++++. |. +..+++|
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L 296 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEV 296 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCc
Confidence 77889999999999988777666666 68999999999988 4566654 7899999999998864 33 6778899
Q ss_pred ceeecccccccc
Q 002875 261 EILFIWNNYFSG 272 (872)
Q Consensus 261 ~~L~l~~n~l~~ 272 (872)
+.|++++|.++.
T Consensus 297 ~~L~L~~N~l~~ 308 (310)
T 4glp_A 297 DNLTLDGNPFLV 308 (310)
T ss_dssp SCEECSSTTTSC
T ss_pred cEEECcCCCCCC
Confidence 999999998863
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=9.5e-22 Score=210.05 Aligned_cols=225 Identities=20% Similarity=0.173 Sum_probs=184.4
Q ss_pred CCCcEEECCCCCCcccCCc---cccCCCCCCEEECcCCcCcccCCccc--cCCCCCcEEECcCCcCccccC----ccccC
Q 002875 18 NELVDLNLSHNSFSGQFPV---EIFNLTSLISLDISRNNFSGHFPGGI--QSLRNLLVLDAFSNSFSGSVP----AEISQ 88 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~---~~~~l~~L~~L~Ls~N~i~~~~~~~~--~~l~~L~~LdL~~n~l~~~~p----~~~~~ 88 (872)
..++.|.+.++.+....-. .+..+++|++|++++|.+.+..|..+ ..+++|++|++++|.+.+..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578889988887532111 12345779999999999999999888 899999999999999987555 44567
Q ss_pred CCCCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCcc--C--CccCCCCCCCCEEEccCccCcccCCc----cccC
Q 002875 89 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ--I--PAELGMLKTVTHMEIGYNFYQGNIPW----QLGN 160 (872)
Q Consensus 89 L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~--~--p~~l~~L~~L~~L~l~~n~~~~~~p~----~~~~ 160 (872)
+++|++|+|++|.+.+..|..|+++++|++|+|++|++.+. + +..++.+++|++|++++|.+.. ++. .+.+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 99999999999999988889999999999999999997652 2 2334788999999999998863 222 2568
Q ss_pred CCCCcEEEeecCCCcccCCccCcCC---CCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCC
Q 002875 161 MSEVQYLDIAGANLSGSIPKELSNL---TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 237 (872)
Q Consensus 161 l~~L~~L~ls~n~l~~~~p~~l~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 237 (872)
+++|++||+++|.+.+..|..+..+ ++|++|++++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 8999999999999998888887776 69999999999999 4565553 7999999999999964 33 68889999
Q ss_pred EEEcccccCCC
Q 002875 238 LLSLMYNEMSG 248 (872)
Q Consensus 238 ~L~L~~n~l~~ 248 (872)
.|++++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999999874
No 339
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=7.9e-23 Score=223.55 Aligned_cols=258 Identities=17% Similarity=0.120 Sum_probs=191.2
Q ss_pred EEECcCCcCcccCCccccCCCCCcEEECcCCcCccccC----ccccCCC-CCCEEEccCCcccccCCcccCCC-----CC
Q 002875 46 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP----AEISQLE-HLKVLNLAGSYFSGPIPSQFGSF-----KS 115 (872)
Q Consensus 46 ~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p----~~~~~L~-~L~~L~L~~n~~~~~~p~~~~~l-----~~ 115 (872)
++++++|.+++.+|..+...++|++|||++|.+....+ ..|..++ +|++|+|++|.+....+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 56788888888888777777779999999998887666 6677888 89999999888887767666665 88
Q ss_pred CcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCC-CCCcEEEeecCCCcccCCccC----cC-CCCCC
Q 002875 116 LEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM-SEVQYLDIAGANLSGSIPKEL----SN-LTKLE 189 (872)
Q Consensus 116 L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l-~~L~~L~ls~n~l~~~~p~~l----~~-l~~L~ 189 (872)
|++|+|++|.+++..+..+. ..+..+ ++|++|++++|.+.+..+..+ .. .++|+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~--------------------~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 141 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELV--------------------KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASIT 141 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHH--------------------HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCC
T ss_pred ccEEECcCCcCChHHHHHHH--------------------HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCcee
Confidence 88888888887654433221 123334 677788888887776554443 33 25899
Q ss_pred EEEccCCCCcccCCc----ccccCC-CCCEEeCcCCCCcCcCCccc----cCC-CCCCEEEcccccCCCC----CCcccc
Q 002875 190 SLFLFRNQLAGQVPW----EFSRVT-TLKSLDLSDNRLSGPIPESF----ADL-KNLRLLSLMYNEMSGT----VPESLV 255 (872)
Q Consensus 190 ~L~L~~n~l~~~~~~----~~~~l~-~L~~L~L~~N~l~~~~~~~~----~~l-~~L~~L~L~~n~l~~~----~p~~l~ 255 (872)
+|++++|.+.+.... .+..++ +|++|+|++|++++..+..+ ..+ ++|+.|++++|.+.+. ++..+.
T Consensus 142 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 999999998854332 334554 99999999999987766544 445 5999999999999863 344555
Q ss_pred C-CCCcceeecccccccccCC----ccCCCCCCCcEEecCCCeeee-------cCCCCCCCCCceeEEEcCCCcCCCCCC
Q 002875 256 Q-LPSLEILFIWNNYFSGSLP----ENLGRNSKLRWVDVSTNNFNG-------SIPPDICSGGVLFKLILFSNNFTGSLS 323 (872)
Q Consensus 256 ~-l~~L~~L~l~~n~l~~~~p----~~~~~~~~L~~L~ls~n~l~~-------~~p~~~~~~~~l~~l~l~~n~~~~~~~ 323 (872)
. .++|++|++++|.+++..+ ..+..+++|+.|++++|.+.+ .++..+.....++.+++++|.+....+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 5 3599999999999986543 445778899999999998432 234456677889999999999876533
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=1.4e-20 Score=194.42 Aligned_cols=179 Identities=21% Similarity=0.245 Sum_probs=129.6
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
..+.++++++.++. +|..+. ++|++|+|++|.+.+..+..|..+++|++|+|++|.+.+..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 46788999988874 455555 688899999999888888888888999999999988888777778888888888888
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccC
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 178 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 178 (872)
+|.+.+..+..|..+++|++|+|++|.+++..+..+..++ +|+.|++++|.+.+..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~------------------------~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLT------------------------KLKELRLNTNQLQSIP 147 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT------------------------TCCEEECCSSCCCCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCC------------------------cccEEECcCCcCCccC
Confidence 8888877777888888888888888888765554455444 4555555555555444
Q ss_pred CccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcC
Q 002875 179 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 224 (872)
Q Consensus 179 p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 224 (872)
+..+..+++|++|+|++|++.+..+..|..+++|+.|++++|++..
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 4455555666666666666665555556666666666666666553
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=4e-23 Score=228.30 Aligned_cols=237 Identities=20% Similarity=0.270 Sum_probs=113.0
Q ss_pred CccccCCCCCCEEECcCCcCcccCC----ccccCCCCCcEEECcCC---cCccccCccc-------cCCCCCCEEEccCC
Q 002875 35 PVEIFNLTSLISLDISRNNFSGHFP----GGIQSLRNLLVLDAFSN---SFSGSVPAEI-------SQLEHLKVLNLAGS 100 (872)
Q Consensus 35 ~~~~~~l~~L~~L~Ls~N~i~~~~~----~~~~~l~~L~~LdL~~n---~l~~~~p~~~-------~~L~~L~~L~L~~n 100 (872)
+..+..+++|++|+|++|.+....+ ..|..+++|++|+|++| ++.+.+|..+ ..+++|++|+|++|
T Consensus 25 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n 104 (386)
T 2ca6_A 25 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 104 (386)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCC
Confidence 4455566667777777666654422 33556666677766664 3333444433 56666666666666
Q ss_pred cccc----cCCcccCCCCCCcEeeCccCcCCccCCccCC----CC---------CCCCEEEccCccCc-ccCC---cccc
Q 002875 101 YFSG----PIPSQFGSFKSLEFLHLAGNLLNDQIPAELG----ML---------KTVTHMEIGYNFYQ-GNIP---WQLG 159 (872)
Q Consensus 101 ~~~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~----~L---------~~L~~L~l~~n~~~-~~~p---~~~~ 159 (872)
.+.. .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|++++|.+. +.+| ..+.
T Consensus 105 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 184 (386)
T 2ca6_A 105 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 184 (386)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHH
Confidence 6655 3455566666666666666666432222221 11 44444444444433 1122 2333
Q ss_pred CCCCCcEEEeecCCCcc-----cCCccCcCCCCCCEEEccCCCCc----ccCCcccccCCCCCEEeCcCCCCcCc----C
Q 002875 160 NMSEVQYLDIAGANLSG-----SIPKELSNLTKLESLFLFRNQLA----GQVPWEFSRVTTLKSLDLSDNRLSGP----I 226 (872)
Q Consensus 160 ~l~~L~~L~ls~n~l~~-----~~p~~l~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~----~ 226 (872)
.+++|++|++++|.+.. ..|..+..+++|+.|+|++|.++ ..+|..+..+++|++|+|++|.+++. +
T Consensus 185 ~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l 264 (386)
T 2ca6_A 185 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAV 264 (386)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHH
T ss_pred hCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHH
Confidence 44445555555554431 12223444444455555544443 22333344444444444444444432 2
Q ss_pred Ccccc--CCCCCCEEEcccccCCC----CCCccc-cCCCCcceeeccccccc
Q 002875 227 PESFA--DLKNLRLLSLMYNEMSG----TVPESL-VQLPSLEILFIWNNYFS 271 (872)
Q Consensus 227 ~~~~~--~l~~L~~L~L~~n~l~~----~~p~~l-~~l~~L~~L~l~~n~l~ 271 (872)
+..+. .+++|+.|++++|.+++ .+|..+ ..+++|++|++++|.++
T Consensus 265 ~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 265 VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp HHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 23331 24444444444444443 133333 23444444444444443
No 342
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=3.6e-22 Score=209.02 Aligned_cols=130 Identities=13% Similarity=0.095 Sum_probs=108.1
Q ss_pred chhhhccCCCCCceeeeecCCCcEEEEEEeeccch-------------------hHHHHHHHHHHhhccCCCCceeEEEE
Q 002875 611 TECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-------------------RIKIVSEFITRIGTVRHKNLIRLLGF 671 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~-------------------~~~~~~~e~~~l~~l~H~niv~l~~~ 671 (872)
...+.||+|+||.||+|...+|+.||||.++.+.. ....+.+|++++++++| +++.++
T Consensus 93 ~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v~~~ 169 (282)
T 1zar_A 93 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAVPKV 169 (282)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSSCCE
T ss_pred EecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCcCeE
Confidence 35689999999999999998899999999964321 34568899999999984 555555
Q ss_pred EecCCeeEEEEcccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEcccccc
Q 002875 672 CYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 751 (872)
Q Consensus 672 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~ 751 (872)
+.. +..|+||||+++|+|.+ +.. .+...++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||++
T Consensus 170 ~~~-~~~~lvmE~~~g~~L~~-l~~----~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DFG~a 239 (282)
T 1zar_A 170 YAW-EGNAVLMELIDAKELYR-VRV----ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFPQS 239 (282)
T ss_dssp EEE-ETTEEEEECCCCEEGGG-CCC----SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred Eec-cceEEEEEecCCCcHHH-cch----hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEECCCC
Confidence 433 56799999999999998 532 23457999999999999999 999999999999999 999999999998
Q ss_pred cc
Q 002875 752 YL 753 (872)
Q Consensus 752 ~~ 753 (872)
+.
T Consensus 240 ~~ 241 (282)
T 1zar_A 240 VE 241 (282)
T ss_dssp EE
T ss_pred eE
Confidence 64
No 343
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=2.5e-20 Score=192.46 Aligned_cols=180 Identities=25% Similarity=0.291 Sum_probs=135.8
Q ss_pred CCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCc
Q 002875 43 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 122 (872)
Q Consensus 43 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 122 (872)
..++++++++.+.. +|..+. ++|+.|++++|.+.+..+..|.++++|++|+|++|.+.+..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 34566666666653 443333 456666666666666555566666666666666666666555566666666666666
Q ss_pred cCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccC
Q 002875 123 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV 202 (872)
Q Consensus 123 ~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 202 (872)
+|.+++ ..+..+..+++|++|++++|.+++..+..+..+++|++|+|++|++++..
T Consensus 92 ~n~l~~------------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 92 NNQLAS------------------------LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp TSCCCC------------------------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcccc------------------------cChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccC
Confidence 666553 33444566778888888888888777777899999999999999999888
Q ss_pred CcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCC
Q 002875 203 PWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 249 (872)
Q Consensus 203 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 249 (872)
+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++...
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 88899999999999999999988888999999999999999999864
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=7.6e-23 Score=226.04 Aligned_cols=242 Identities=17% Similarity=0.163 Sum_probs=197.4
Q ss_pred CCcchhhhcCCCCcEEECCCCCCcccCC----ccccCCCCCCEEECcCCc---CcccCCccc-------cCCCCCcEEEC
Q 002875 8 LPGKPLRIFFNELVDLNLSHNSFSGQFP----VEIFNLTSLISLDISRNN---FSGHFPGGI-------QSLRNLLVLDA 73 (872)
Q Consensus 8 ~~~~~~~~~~~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~Ls~N~---i~~~~~~~~-------~~l~~L~~LdL 73 (872)
++..+.+ .+.|+.|+|++|.|+...+ ..|..+++|++|+|++|. +.+.+|..+ ..+++|++|+|
T Consensus 24 l~~~l~~--~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~L 101 (386)
T 2ca6_A 24 VFAVLLE--DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 101 (386)
T ss_dssp TSHHHHH--CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHhc--CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEEC
Confidence 3444445 7889999999999987644 447799999999999964 444556554 78999999999
Q ss_pred cCCcCcc----ccCccccCCCCCCEEEccCCcccccCCcccC----CC---------CCCcEeeCccCcCC-ccCC---c
Q 002875 74 FSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGPIPSQFG----SF---------KSLEFLHLAGNLLN-DQIP---A 132 (872)
Q Consensus 74 ~~n~l~~----~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~----~l---------~~L~~L~L~~n~l~-~~~p---~ 132 (872)
++|.+.. .+|..+..+++|++|+|++|.+....+..+. .+ ++|++|+|++|.++ ..++ .
T Consensus 102 s~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 181 (386)
T 2ca6_A 102 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 181 (386)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHH
Confidence 9999987 4777889999999999999999754444443 34 89999999999997 3444 4
Q ss_pred cCCCCCCCCEEEccCccCc--c---cCCccccCCCCCcEEEeecCCCc----ccCCccCcCCCCCCEEEccCCCCccc--
Q 002875 133 ELGMLKTVTHMEIGYNFYQ--G---NIPWQLGNMSEVQYLDIAGANLS----GSIPKELSNLTKLESLFLFRNQLAGQ-- 201 (872)
Q Consensus 133 ~l~~L~~L~~L~l~~n~~~--~---~~p~~~~~l~~L~~L~ls~n~l~----~~~p~~l~~l~~L~~L~L~~n~l~~~-- 201 (872)
.+..+++|+.|++++|.+. + ..|..+..+++|++|++++|.+. +.+|..+..+++|+.|+|++|.+.+.
T Consensus 182 ~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 261 (386)
T 2ca6_A 182 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA 261 (386)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHH
T ss_pred HHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhH
Confidence 6778899999999999876 2 24447788999999999999996 67788899999999999999999865
Q ss_pred --CCcccc--cCCCCCEEeCcCCCCcC----cCCccc-cCCCCCCEEEcccccCCCCCC
Q 002875 202 --VPWEFS--RVTTLKSLDLSDNRLSG----PIPESF-ADLKNLRLLSLMYNEMSGTVP 251 (872)
Q Consensus 202 --~~~~~~--~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~L~~n~l~~~~p 251 (872)
++..+. .+++|++|+|++|.++. .+|..+ ..+++|+.|++++|++++..+
T Consensus 262 ~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 262 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 344553 38999999999999997 467776 668999999999999997653
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=1.2e-22 Score=219.99 Aligned_cols=253 Identities=17% Similarity=0.228 Sum_probs=193.4
Q ss_pred CCCCEEECcCCcCcccCCccccCC--CCCcEEECcCCcCccccCccccCCCCCCEEEccCCccccc-CCcccCCCCCCcE
Q 002875 42 TSLISLDISRNNFSGHFPGGIQSL--RNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP-IPSQFGSFKSLEF 118 (872)
Q Consensus 42 ~~L~~L~Ls~N~i~~~~~~~~~~l--~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~-~p~~~~~l~~L~~ 118 (872)
..++.+++++|.+. +..+..+ ++++.|++++|.+.+..+. +.++++|++|+|++|.+.+. +|..+..+++|++
T Consensus 47 ~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 47 SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 45889999999876 4567777 8999999999999876554 66799999999999998765 7788899999999
Q ss_pred eeCccCcCCccCCccCCCCCCCCEEEccCc-cCcc-cCCccccCCCCCcEEEeecC-CCccc-CCccCcCCC-CCCEEEc
Q 002875 119 LHLAGNLLNDQIPAELGMLKTVTHMEIGYN-FYQG-NIPWQLGNMSEVQYLDIAGA-NLSGS-IPKELSNLT-KLESLFL 193 (872)
Q Consensus 119 L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n-~~~~-~~p~~~~~l~~L~~L~ls~n-~l~~~-~p~~l~~l~-~L~~L~L 193 (872)
|+|++|.+++..+..++.+++|++|++++| .+.+ .++..+.++++|++|++++| .+++. ++..+..++ +|++|++
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 999999998888888888999999999998 4554 35666778889999999999 88754 566677888 8999999
Q ss_pred cCC--CCc-ccCCcccccCCCCCEEeCcCCC-CcCcCCccccCCCCCCEEEccccc-CCCCCCccccCCCCcceeecccc
Q 002875 194 FRN--QLA-GQVPWEFSRVTTLKSLDLSDNR-LSGPIPESFADLKNLRLLSLMYNE-MSGTVPESLVQLPSLEILFIWNN 268 (872)
Q Consensus 194 ~~n--~l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~l~~n 268 (872)
++| .++ +.++..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++|
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 988 444 3445567788899999999888 666667788888899999998885 22221225677888888888887
Q ss_pred cccccCCccCCCC-CCCcEEecCCCeeeecCCCCC
Q 002875 269 YFSGSLPENLGRN-SKLRWVDVSTNNFNGSIPPDI 302 (872)
Q Consensus 269 ~l~~~~p~~~~~~-~~L~~L~ls~n~l~~~~p~~~ 302 (872)
+.. ..+..+ ..+..|++++|.+++..|+.+
T Consensus 283 -i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 283 -VPD---GTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp -SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred -cCH---HHHHHHHhhCcceEEecccCccccCCcc
Confidence 321 122222 235556677777776666543
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=1.1e-20 Score=201.32 Aligned_cols=209 Identities=22% Similarity=0.381 Sum_probs=124.4
Q ss_pred cEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCC
Q 002875 21 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 100 (872)
Q Consensus 21 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n 100 (872)
..+.+..+.+.... .+..+++|++|++++|.+.. ++ .+..+++|++|++++|.+.+..+ +..+++|++|+|++|
T Consensus 22 ~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n 95 (308)
T 1h6u_A 22 IKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (308)
T ss_dssp HHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCC
Confidence 34455566655432 34567788888888888774 34 57788888888888888875443 788888888888888
Q ss_pred cccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCc
Q 002875 101 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 180 (872)
Q Consensus 101 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~ 180 (872)
.+.+. ..|..+++|++|++++|.+++. + .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+.+..+
T Consensus 96 ~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~- 168 (308)
T 1h6u_A 96 PLKNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP- 168 (308)
T ss_dssp CCSCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred cCCCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-
Confidence 87753 3577888888888888877653 2 25555555555555555443222 4455555555555555553222
Q ss_pred cCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCC
Q 002875 181 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 247 (872)
Q Consensus 181 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 247 (872)
+..+++|+.|++++|.+++..+ +..+++|++|++++|++++.. .+..+++|+.|++++|+++
T Consensus 169 -l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 169 -LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp -GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred -hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 4455555555555555543322 444555555555555554322 2444445555555544443
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=1.2e-20 Score=200.93 Aligned_cols=192 Identities=20% Similarity=0.338 Sum_probs=170.2
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
++.|+.|++++|.+..+ + .+..+++|++|+|++|.+.+..+ +..+++|++|++++|.+.+. + .+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEE
Confidence 67899999999999864 4 68999999999999999986544 99999999999999999853 3 799999999999
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcc
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 176 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~ 176 (872)
|++|.+.+. + .+..+++|++|++++|.+++..+ ++.+++|++|++++|.+.+..+ +.++++|+.|++++|.+.+
T Consensus 114 l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 999999864 3 39999999999999999987654 8899999999999998876443 8899999999999999986
Q ss_pred cCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcC
Q 002875 177 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 224 (872)
Q Consensus 177 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 224 (872)
..+ +..+++|++|++++|++.+.. .+..+++|+.|++++|++++
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 544 888999999999999999765 38899999999999999975
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=7e-20 Score=199.00 Aligned_cols=240 Identities=16% Similarity=0.145 Sum_probs=142.0
Q ss_pred cEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccC-ccccCCCCCCE-EEcc
Q 002875 21 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP-AEISQLEHLKV-LNLA 98 (872)
Q Consensus 21 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p-~~~~~L~~L~~-L~L~ 98 (872)
++++-++++++. +|..+. +++++|+|++|+|+.+.+++|.++++|++|||++|.+.+.+| .+|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt~-iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVTE-IPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCCS-CCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCCc-cCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 567788888874 455553 678899999999987777788999999999999998866555 46788888775 5666
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccC
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 178 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 178 (872)
+|.+....|+.|..+++|++|++++|.++...+..+.....+..+++..+ +.+....
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~-----------------------~~i~~l~ 145 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN-----------------------INIHTIE 145 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC-----------------------TTCCEEC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc-----------------------ccccccc
Confidence 78888888888889999999999998887665555555455555555432 2222222
Q ss_pred CccCcCCC-CCCEEEccCCCCcccCCcccccCCCCCEEeCcC-CCCcCcCCccccCCCCCCEEEcccccCCCCCCccccC
Q 002875 179 PKELSNLT-KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD-NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 256 (872)
Q Consensus 179 p~~l~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 256 (872)
+..+..+. .++.|++++|+++.+.+..| ...+|++|++++ |.++...++.|..+++|+.|++++|+++...+..+..
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~ 224 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 224 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT
T ss_pred ccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc
Confidence 22333332 34445555555544333333 223455555542 3444333344555555555555555555433333333
Q ss_pred CCCcceeecccccccccCCccCCCCCCCcEEecCC
Q 002875 257 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 291 (872)
Q Consensus 257 l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~ 291 (872)
+++|+.+++ .--..+| .+..+++|+.+++++
T Consensus 225 L~~L~~l~~---~~l~~lP-~l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 225 LKKLRARST---YNLKKLP-TLEKLVALMEASLTY 255 (350)
T ss_dssp CCEEECTTC---TTCCCCC-CTTTCCSCCEEECSC
T ss_pred chHhhhccC---CCcCcCC-CchhCcChhhCcCCC
Confidence 333332222 1112333 245555566666554
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=1.2e-19 Score=197.25 Aligned_cols=221 Identities=15% Similarity=0.047 Sum_probs=142.8
Q ss_pred CCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCC-ccCCCCCCCCE-EEccCccCcccCCccccCCCCCcEEE
Q 002875 91 HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTH-MEIGYNFYQGNIPWQLGNMSEVQYLD 168 (872)
Q Consensus 91 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~L~~L~~-L~l~~n~~~~~~p~~~~~l~~L~~L~ 168 (872)
++++|+|++|.++.+.+.+|.++++|++|+|++|.+.+.+| ..|.+++++.+ +.++.|.+....|..+..+++|++|+
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~ 110 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 110 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEE
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccc
Confidence 44444444444443333344444444444444444433222 23444444433 23333444444556667777888888
Q ss_pred eecCCCcccCCccCcCCCCCCEEEccC-CCCcccCCcccccCC-CCCEEeCcCCCCcCcCCccccCCCCCCEEEccc-cc
Q 002875 169 IAGANLSGSIPKELSNLTKLESLFLFR-NQLAGQVPWEFSRVT-TLKSLDLSDNRLSGPIPESFADLKNLRLLSLMY-NE 245 (872)
Q Consensus 169 ls~n~l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-n~ 245 (872)
+++|.+....+..+....++..|++.. +.+....+..|..+. .++.|++++|+|+...+..| ...+|+.|+++. |.
T Consensus 111 l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 111 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTT
T ss_pred ccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCc
Confidence 888888766666666677788888865 677777777777765 68899999999986555555 556899999985 66
Q ss_pred CCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCC
Q 002875 246 MSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 316 (872)
Q Consensus 246 l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n 316 (872)
+....++.|..+++|++|++++|+++...+..+.+ |+.|.+.++.-...+|. +....+|+.+.+.++
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLKKLPT-LEKLVALMEASLTYP 256 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCCCCCC-TTTCCSCCEEECSCH
T ss_pred ccCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcCcCCC-chhCcChhhCcCCCC
Confidence 66555567899999999999999999655555544 55555544433346663 666778888887654
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=1.9e-19 Score=180.01 Aligned_cols=181 Identities=17% Similarity=0.151 Sum_probs=115.8
Q ss_pred cEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCC
Q 002875 21 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 100 (872)
Q Consensus 21 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n 100 (872)
+.++.+++.+..+ |..+ .++|++|++++|.+.+..+..|..+++|++|++++|.+++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 4556666666533 3333 246667777777666655556666677777777777666555555666677777777777
Q ss_pred cccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCc
Q 002875 101 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 180 (872)
Q Consensus 101 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~ 180 (872)
.+.+..+..|.++++|++|++++|.+++..+..+..+++|++|++++|.+.+..+..+.++++|++|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 6665555556667777777777776666555556666777777777766665555556667777777777775543
Q ss_pred cCcCCCCCCEEEccCCCCcccCCcccccCCC
Q 002875 181 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTT 211 (872)
Q Consensus 181 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 211 (872)
.+++|+.|+++.|++++.+|..++.++.
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3456677777777777777766665543
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=3.7e-19 Score=177.94 Aligned_cols=162 Identities=20% Similarity=0.183 Sum_probs=97.5
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEc
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 97 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L 97 (872)
+.|+.|+|++|+++++.+..|..+++|++|++++|++.+..+..|..+++|++|++++|.+++..+..|.++++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 45666666666666555555666666666666666666555555566666666666666666544445566666666666
Q ss_pred cCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCccc
Q 002875 98 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 177 (872)
Q Consensus 98 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~ 177 (872)
++|.+.+..+..|.++++|++|++++|.+++..+..+..+++|+.|++++|.+.+ .+++|++|+++.|.++|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGV 180 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTT
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCce
Confidence 6666665555556666666666666666665555556666666666666664432 234556666666666666
Q ss_pred CCccCcCCC
Q 002875 178 IPKELSNLT 186 (872)
Q Consensus 178 ~p~~l~~l~ 186 (872)
+|..++.++
T Consensus 181 ip~~~~~l~ 189 (208)
T 2o6s_A 181 VRNSAGSVA 189 (208)
T ss_dssp BBCTTSSBC
T ss_pred eeccCcccc
Confidence 666555543
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.78 E-value=1.2e-18 Score=198.95 Aligned_cols=188 Identities=24% Similarity=0.337 Sum_probs=115.4
Q ss_pred CCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCc
Q 002875 43 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 122 (872)
Q Consensus 43 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 122 (872)
+|++|+|++|.+.+ +|..+ .++|++|+|++|.++ .+| ..+++|++|+|++|.+++ +|. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 55555555555544 33322 244555555555555 333 234555555555555554 343 433 55555555
Q ss_pred cCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccC
Q 002875 123 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV 202 (872)
Q Consensus 123 ~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 202 (872)
+|.+++ +|. .+++|+.|++++|.+.+ +|. .+++|+.|++++|.+++ +|. +. ++|+.|+|++|.|+. +
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~-l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLES-L 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSS-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCc-h
Confidence 555544 333 34555555555555554 333 45677777777777775 555 54 778888888888873 3
Q ss_pred CcccccCCCC-------CEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCC
Q 002875 203 PWEFSRVTTL-------KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 258 (872)
Q Consensus 203 ~~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 258 (872)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|++++|++++..|..+..++
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 44 443 66 99999999998 4677777799999999999999988887766543
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.77 E-value=2.2e-18 Score=196.70 Aligned_cols=193 Identities=23% Similarity=0.372 Sum_probs=159.0
Q ss_pred cccCCC-----CCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCC
Q 002875 61 GIQSLR-----NLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 135 (872)
Q Consensus 61 ~~~~l~-----~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 135 (872)
.|..++ +|+.|++++|.+++ +|..+. ++|++|+|++|.++ .+| ..+++|++|+|++|.+++ +|. +.
T Consensus 49 ~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~ 119 (571)
T 3cvr_A 49 AVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LP 119 (571)
T ss_dssp HHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CC
T ss_pred hhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hh
Confidence 455554 89999999999986 676663 78999999999998 566 457899999999999987 666 66
Q ss_pred CCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEE
Q 002875 136 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSL 215 (872)
Q Consensus 136 ~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 215 (872)
. +|++|++++|.+.+ +|. .+++|+.|++++|.+++ +|. .+++|+.|+|++|++++ +|. |. ++|+.|
T Consensus 120 ~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L 185 (571)
T 3cvr_A 120 A--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEAL 185 (571)
T ss_dssp T--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEE
T ss_pred c--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEE
Confidence 5 99999999999887 555 68899999999999986 555 57899999999999987 454 65 899999
Q ss_pred eCcCCCCcCcCCccccCCCCC-------CEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCC
Q 002875 216 DLSDNRLSGPIPESFADLKNL-------RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 281 (872)
Q Consensus 216 ~L~~N~l~~~~~~~~~~l~~L-------~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~ 281 (872)
+|++|+|+ .+|. |.. +| +.|++++|+++ .+|..+..+++|+.|++++|.+++..|..+..+
T Consensus 186 ~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 186 DVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp ECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred ECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 99999998 4555 554 77 99999999998 577778889999999999999998888776553
No 354
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=8.7e-18 Score=169.15 Aligned_cols=152 Identities=19% Similarity=0.254 Sum_probs=107.3
Q ss_pred cEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCC
Q 002875 21 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 100 (872)
Q Consensus 21 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n 100 (872)
+.++++++.++.+ |..+. ++|++|+|++|.|.++.+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~i-P~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTEI-PTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSSC-CSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCcC-CCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 5778888888754 54444 67888888888888777777888888888888888888777778888888888888888
Q ss_pred cccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCc
Q 002875 101 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 180 (872)
Q Consensus 101 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~ 180 (872)
.++...+..|.++++|++|+|++|.+++..|..|..+++ |++|++++|.+++..+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~------------------------L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN------------------------LNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT------------------------CCEEECCSSCCSCCCTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCC------------------------CCEEECCCCcCCEECHH
Confidence 887666666778888888888888777665555554444 44455555555544444
Q ss_pred cCcCCCCCCEEEccCCCCc
Q 002875 181 ELSNLTKLESLFLFRNQLA 199 (872)
Q Consensus 181 ~l~~l~~L~~L~L~~n~l~ 199 (872)
.+..+++|+.|++++|.+.
T Consensus 147 ~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 147 TFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp TTTTCTTCCEEECCSSCEE
T ss_pred HHhCCCCCCEEEeCCCCcC
Confidence 5555566666666666554
No 355
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=7.6e-19 Score=181.59 Aligned_cols=135 Identities=14% Similarity=0.098 Sum_probs=105.8
Q ss_pred cchhhhccCCCCCceeeeec-CCCcE--EEEEEeeccchh-------------------------HHHHHHHHHHhhccC
Q 002875 610 STECEEAARPQSAAGCKAVL-PTGIT--VSVKKIEWGATR-------------------------IKIVSEFITRIGTVR 661 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~-~~g~~--vavK~~~~~~~~-------------------------~~~~~~e~~~l~~l~ 661 (872)
+...+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|+..+++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 34668899999999999998 78999 999987543111 135788999999999
Q ss_pred CCCc--eeEEEEEecCCeeEEEEcccCC-C----ChHHHhhCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCcccCCCCCC
Q 002875 662 HKNL--IRLLGFCYNRHQAYLLYDYLPN-G----NLSEKIRTKRDWAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKAS 733 (872)
Q Consensus 662 H~ni--v~l~~~~~~~~~~~lv~ey~~~-g----~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH-~~~~~~i~Hrdlk~~ 733 (872)
|+++ ...+++ +..++||||+.+ | +|.++... .++.+...++.|++.|++||| +. +|+||||||+
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~ 200 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-LKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEY 200 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTT
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHH
Confidence 8864 344433 357899999952 4 67776543 223456789999999999999 88 9999999999
Q ss_pred CeeeCCCCCeeEccccccccc
Q 002875 734 NIVFDENMEPHLAEFGFKYLT 754 (872)
Q Consensus 734 Nill~~~~~~ki~dfg~~~~~ 754 (872)
|||++. .++|+|||++...
T Consensus 201 NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 201 NIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SEEESS--SEEECCCTTCEET
T ss_pred HEEEcC--cEEEEECcccccC
Confidence 999998 9999999998653
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=3.7e-18 Score=186.17 Aligned_cols=177 Identities=20% Similarity=0.145 Sum_probs=124.2
Q ss_pred CcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCcccc-CCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 20 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 20 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~-~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
-+.++++++.+.. +|..+. ..+++|+|++|+|++..+..|. .+++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 20 ~~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 3678888888875 455554 4578888888888887777777 88888888888888887777788888888888888
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccC
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 178 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 178 (872)
+|.+....+..|.++++|++|+|++|.++...|..|..+++|++|++++|.+.. ..
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~------------------------l~ 152 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR------------------------FP 152 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS------------------------CC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe------------------------eC
Confidence 888887777778888888888888888876666666655555555555554443 22
Q ss_pred CccC---cCCCCCCEEEccCCCCcccCCcccccCCC--CCEEeCcCCCCc
Q 002875 179 PKEL---SNLTKLESLFLFRNQLAGQVPWEFSRVTT--LKSLDLSDNRLS 223 (872)
Q Consensus 179 p~~l---~~l~~L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~L~~N~l~ 223 (872)
+..+ ..+++|+.|+|++|+++...+..+..++. ++.|+|++|.+.
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 2222 34566666666666666554445555554 366777777664
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=2.4e-18 Score=198.78 Aligned_cols=189 Identities=23% Similarity=0.308 Sum_probs=121.7
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
.+..++|..+.+..+.+ +..+++|++|++++|.+... + .|..+++|+.|+|++|.+.+..| +..+++|++|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 45666777777765543 56788899999999888753 3 58888999999999998886544 8888899999999
Q ss_pred CCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccC
Q 002875 99 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 178 (872)
Q Consensus 99 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 178 (872)
+|.+.+ +| .|..+++|++|+|++|.+.+. ..+..+++|+.|++++|.+.+. ..+..+++|+.|+|++|.+.+..
T Consensus 96 ~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 96 ENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp SSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCch
Confidence 988875 33 688888888888888888652 3355555555555555554432 33444555555555555554433
Q ss_pred CccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCc
Q 002875 179 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS 223 (872)
Q Consensus 179 p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 223 (872)
| +..+++|+.|+|++|.+.+. ..+..+++|+.|+|++|++.
T Consensus 170 ~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 170 P--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred h--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 3 44445555555555554432 13444444555555444444
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=4.8e-18 Score=179.10 Aligned_cols=189 Identities=22% Similarity=0.301 Sum_probs=132.4
Q ss_pred CcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 20 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 20 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
+..+.+..+.+.... .+..+++|++|++++|.+... + .+..+++|++|++++|.+++..+ +.++++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 334455555555432 234567777777777777643 3 36777777777777777765433 77777777777777
Q ss_pred CcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCC
Q 002875 100 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 179 (872)
Q Consensus 100 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p 179 (872)
|.+.+ +| .+..+++|++|++++|.+++. ..+..+++|+.|++++|.+.+. ..+..+++|+.|++++|.+.+..+
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 77764 22 377777777777777777653 4566777777777777776654 457778888888888888876544
Q ss_pred ccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcC
Q 002875 180 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 224 (872)
Q Consensus 180 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 224 (872)
+..+++|+.|++++|.+++. + .+..+++|+.|++++|+++.
T Consensus 174 --l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred --hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 77888888888888888764 3 47888888888888888875
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=4.7e-18 Score=179.15 Aligned_cols=188 Identities=26% Similarity=0.334 Sum_probs=131.9
Q ss_pred CEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccC
Q 002875 45 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 124 (872)
Q Consensus 45 ~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 124 (872)
..+.+..+.+.+.. .+..+++|+.|++++|.+... + .+..+++|++|+|++|.+.+..+ +.++++|++|++++|
T Consensus 27 ~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 27 IKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC
Confidence 33455555555432 245677778888887777643 3 47777788888888887775443 777888888888888
Q ss_pred cCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCc
Q 002875 125 LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPW 204 (872)
Q Consensus 125 ~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~ 204 (872)
.+++. ..+..+++|++|++++|.+.+. ..+..+++|+.|++++|.+.+. ..+..+++|+.|++++|.+.+..+
T Consensus 101 ~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 101 KVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp CCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred cCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 77652 3377777888888887776653 3566777788888888877754 567777788888888887776544
Q ss_pred ccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCC
Q 002875 205 EFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 248 (872)
Q Consensus 205 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 248 (872)
+..+++|++|++++|.++.. + .+..+++|+.|++++|++..
T Consensus 174 -l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred -hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 77777888888888877753 3 37777788888888877764
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=1.5e-17 Score=167.44 Aligned_cols=153 Identities=16% Similarity=0.191 Sum_probs=108.3
Q ss_pred cEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCC-ccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 21 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP-GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 21 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
+.+++++|.++. +|..+. ..+++|+|++|.|++..+ +.|..+++|++|+|++|.+++..+.+|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 578888888875 455554 356788888888887644 4578888888888888888877777788888888888888
Q ss_pred CcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCC
Q 002875 100 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 179 (872)
Q Consensus 100 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p 179 (872)
|.+.+..+..|.++++|++|+|++|.+++..|..|..+++|+.| ++++|.+++..|
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L------------------------~L~~N~l~~~~~ 146 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL------------------------SLYDNQITTVAP 146 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE------------------------ECTTSCCCCBCT
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE------------------------ECCCCcCCEECH
Confidence 88887777778888888888888888776666555555555544 455555554445
Q ss_pred ccCcCCCCCCEEEccCCCCcc
Q 002875 180 KELSNLTKLESLFLFRNQLAG 200 (872)
Q Consensus 180 ~~l~~l~~L~~L~L~~n~l~~ 200 (872)
..|..+++|+.|++++|.+..
T Consensus 147 ~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 147 GAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TTTTTCTTCCEEECCSCCEEC
T ss_pred HHhcCCCCCCEEEecCcCCcC
Confidence 555555555555555555543
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=2.6e-17 Score=165.61 Aligned_cols=153 Identities=18% Similarity=0.275 Sum_probs=116.4
Q ss_pred CEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccC
Q 002875 45 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 124 (872)
Q Consensus 45 ~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 124 (872)
+.+++++|.+.. +|..+. ++|+.|++++|.+.+..+..|..+++|++|+|++|.+.+..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 467777777663 444332 56777777777777666666777777777777777777666777777777777777777
Q ss_pred cCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCc
Q 002875 125 LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPW 204 (872)
Q Consensus 125 ~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~ 204 (872)
.++.. .+..+.++++|++|++++|.+.+..|..|..+++|+.|+|++|++++..+.
T Consensus 91 ~l~~l------------------------~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 91 KITEL------------------------PKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCCCC------------------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCcc------------------------CHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 66533 233456677888888888888888888999999999999999999998888
Q ss_pred ccccCCCCCEEeCcCCCCcC
Q 002875 205 EFSRVTTLKSLDLSDNRLSG 224 (872)
Q Consensus 205 ~~~~l~~L~~L~L~~N~l~~ 224 (872)
.|..+++|++|++++|.+..
T Consensus 147 ~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 147 TFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTTCTTCCEEECCSSCEEC
T ss_pred HHhCCCCCCEEEeCCCCcCC
Confidence 89999999999999999864
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=1.1e-17 Score=182.46 Aligned_cols=176 Identities=19% Similarity=0.220 Sum_probs=128.6
Q ss_pred CEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCcccc-CCCCCCEEEccCCcccccCCcccCCCCCCcEeeCcc
Q 002875 45 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEIS-QLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 123 (872)
Q Consensus 45 ~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~-~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 123 (872)
+.+++++|.+.. +|..+. ..++.|+|++|.+++..+..|. ++++|++|+|++|.+.+..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 466777776663 444332 3466677777666665555555 666666666666666666566666666666666666
Q ss_pred CcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCC
Q 002875 124 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP 203 (872)
Q Consensus 124 n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 203 (872)
|.++. ..+..+.++++|+.|++++|.+.+..|..|..+++|+.|+|++|+++...+
T Consensus 98 N~l~~------------------------~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 153 (361)
T 2xot_A 98 NHLHT------------------------LDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPV 153 (361)
T ss_dssp SCCCE------------------------ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCG
T ss_pred CcCCc------------------------CCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCH
Confidence 66554 334455667788888888888888888899999999999999999997666
Q ss_pred ccc---ccCCCCCEEeCcCCCCcCcCCccccCCCC--CCEEEcccccCC
Q 002875 204 WEF---SRVTTLKSLDLSDNRLSGPIPESFADLKN--LRLLSLMYNEMS 247 (872)
Q Consensus 204 ~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~L~~n~l~ 247 (872)
..| ..+++|+.|+|++|+|+...+..+..++. ++.|++++|++.
T Consensus 154 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 154 ELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp GGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred HHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 556 67999999999999999777778888887 488999999886
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.74 E-value=1.1e-17 Score=193.28 Aligned_cols=193 Identities=25% Similarity=0.339 Sum_probs=140.2
Q ss_pred CCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEee
Q 002875 41 LTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLH 120 (872)
Q Consensus 41 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 120 (872)
+..+..+.++.+.+....+ +..+++|+.|++++|.+.. +| .+..+++|++|+|++|.+.+..| |..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3445556777777765443 5778899999999999874 44 68889999999999999987554 88999999999
Q ss_pred CccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcc
Q 002875 121 LAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAG 200 (872)
Q Consensus 121 L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 200 (872)
|++|.+.+. ..+..+++|++|++++|.+.+. ..+..+++|+.|+|++|.+.+. ..+..+++|+.|+|++|.+.+
T Consensus 94 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 999998753 3677777788888777776642 3466677777777777777654 456677777777777777766
Q ss_pred cCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCC
Q 002875 201 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 249 (872)
Q Consensus 201 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 249 (872)
..| +..+++|+.|+|++|++++. ..+..+++|+.|+|++|++.+.
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred chh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 554 66677777777777777653 3466677777777777766643
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.73 E-value=3.3e-17 Score=164.95 Aligned_cols=154 Identities=17% Similarity=0.236 Sum_probs=112.3
Q ss_pred CEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccC-ccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCcc
Q 002875 45 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP-AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 123 (872)
Q Consensus 45 ~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p-~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 123 (872)
+++++++|.+.. +|..+. ..+++|++++|.+++..| ..|..+++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 466777776654 344332 234666666666665433 3356666666666666666665555666666666666666
Q ss_pred CcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCC
Q 002875 124 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP 203 (872)
Q Consensus 124 n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 203 (872)
|.+++ ..+..+.++++|++|++++|.+.+..|..+..+++|++|+|++|++++..|
T Consensus 91 N~l~~------------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 146 (220)
T 2v70_A 91 NRLEN------------------------VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAP 146 (220)
T ss_dssp SCCCC------------------------CCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCT
T ss_pred CccCc------------------------cCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECH
Confidence 66544 344456677788888888888888888999999999999999999999999
Q ss_pred cccccCCCCCEEeCcCCCCcCc
Q 002875 204 WEFSRVTTLKSLDLSDNRLSGP 225 (872)
Q Consensus 204 ~~~~~l~~L~~L~L~~N~l~~~ 225 (872)
..|..+++|++|++++|.+...
T Consensus 147 ~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 147 GAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTTTTCTTCCEEECCSCCEECS
T ss_pred HHhcCCCCCCEEEecCcCCcCC
Confidence 9999999999999999998754
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.72 E-value=7.3e-17 Score=163.56 Aligned_cols=154 Identities=21% Similarity=0.244 Sum_probs=111.2
Q ss_pred CcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 20 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 20 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
-+.++.+++.+..+ |..+. ++|++|+|++|.|.+..|..|..+++|++|+|++|.+....+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~~i-p~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHASV-PAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCSSC-CSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcCcc-CCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 45788888888644 44444 7888888888888887788888888888888888888766666678888888888888
Q ss_pred CcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCC
Q 002875 100 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 179 (872)
Q Consensus 100 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p 179 (872)
|.+++..+..|..+++|++|+|++|.++ .+|.. +..+++|++|++++|.+.+..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~------------------------~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRG------------------------IERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTT------------------------GGGCTTCSEEECCSSCCCCCCT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcc------------------------cccCCCCCEEECCCCcCCccCH
Confidence 8888776777788888888888888775 33433 4455556666666666665555
Q ss_pred ccCcCCCCCCEEEccCCCCccc
Q 002875 180 KELSNLTKLESLFLFRNQLAGQ 201 (872)
Q Consensus 180 ~~l~~l~~L~~L~L~~n~l~~~ 201 (872)
..+..+++|+.|++++|.+...
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTT
T ss_pred HHHhCCCCCCEEEeeCCCccCC
Confidence 5566666777777777766543
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.71 E-value=1.4e-16 Score=161.41 Aligned_cols=153 Identities=24% Similarity=0.280 Sum_probs=106.0
Q ss_pred CEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccC
Q 002875 45 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 124 (872)
Q Consensus 45 ~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 124 (872)
+.++.+++.+.. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+....+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 455666655542 333222 55566666666665555555555566666666666555444445555555555555555
Q ss_pred cCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCc
Q 002875 125 LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPW 204 (872)
Q Consensus 125 ~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~ 204 (872)
.++ +..+..+..+++|+.|++++|.+. .+|..+..+++|+.|+|++|++.+..+.
T Consensus 99 ~l~------------------------~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 99 QLT------------------------VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp CCC------------------------CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred cCC------------------------ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 554 333444567778888888888888 6788899999999999999999988888
Q ss_pred ccccCCCCCEEeCcCCCCcCc
Q 002875 205 EFSRVTTLKSLDLSDNRLSGP 225 (872)
Q Consensus 205 ~~~~l~~L~~L~L~~N~l~~~ 225 (872)
.|..+++|+.|++++|.+...
T Consensus 154 ~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TTTTCTTCCEEECTTSCBCTT
T ss_pred HHhCCCCCCEEEeeCCCccCC
Confidence 899999999999999998754
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=3.5e-17 Score=161.88 Aligned_cols=154 Identities=19% Similarity=0.259 Sum_probs=89.4
Q ss_pred cCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcE
Q 002875 39 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 118 (872)
Q Consensus 39 ~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 118 (872)
..+++|++|++++|.+. .+| .+..+++|++|++++|.+. .+..+..+++|++|++++|.+.+..|..|+.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45667777777777776 334 5667777777777777554 2335666777777777777776656666777777777
Q ss_pred eeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCC
Q 002875 119 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 198 (872)
Q Consensus 119 L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l 198 (872)
|++++|.+++..+..++.+++|++|++++|.. +. .+| .+..+++|++|++++|.+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~-----------------------i~-~~~-~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGA-----------------------IT-DIM-PLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTB-----------------------CC-CCG-GGGGCSSCCEEECTTBCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCC-----------------------cc-ccH-hhcCCCCCCEEECCCCCC
Confidence 77777766654444454444444444444431 22 222 344455555555555555
Q ss_pred cccCCcccccCCCCCEEeCcCCCCc
Q 002875 199 AGQVPWEFSRVTTLKSLDLSDNRLS 223 (872)
Q Consensus 199 ~~~~~~~~~~l~~L~~L~L~~N~l~ 223 (872)
++.. .+..+++|++|++++|++.
T Consensus 172 ~~~~--~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 172 HDYR--GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCCT--TGGGCSSCCEEEECBC---
T ss_pred cChH--HhccCCCCCEEEeeCcccC
Confidence 5422 4555555666666665553
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=1.9e-17 Score=171.59 Aligned_cols=167 Identities=23% Similarity=0.292 Sum_probs=111.4
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEc
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 97 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L 97 (872)
..++.+++++|.+..+. .+..+++|++|++++|.+.. ++ .+..+++|++|++++|.+++..+ +.++++|++|+|
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 35677788888887654 57888899999999998875 44 68888899999999998886544 888888999999
Q ss_pred cCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCccc
Q 002875 98 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 177 (872)
Q Consensus 98 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~ 177 (872)
++|.+.+. |. +.. ++|++|++++|.+++. ..+..+++|+.|++++|.+.+. + .+..+++|+.|++++|.+.+.
T Consensus 93 ~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 93 NRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 99888763 33 333 8888888888888653 2355555555555555554432 2 344455555555555555433
Q ss_pred CCccCcCCCCCCEEEccCCCCc
Q 002875 178 IPKELSNLTKLESLFLFRNQLA 199 (872)
Q Consensus 178 ~p~~l~~l~~L~~L~L~~n~l~ 199 (872)
..+..+++|+.|++++|.+.
T Consensus 166 --~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 166 --GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp --TTSTTCCCCCEEEEEEEEEE
T ss_pred --HHhccCCCCCEEeCCCCccc
Confidence 33444444555555444444
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.68 E-value=8.7e-17 Score=159.00 Aligned_cols=150 Identities=17% Similarity=0.235 Sum_probs=116.1
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
++.|+.|++++|.|.. +| .+..+++|++|++++|.+.. +..+..+++|++|++++|.+++..|..+..+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 6789999999999984 45 68999999999999997763 35799999999999999999988899999999999999
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCc-CCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCC
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNL-LNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 174 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l 174 (872)
|++|.+.+..|..|+.+++|++|++++|. ++. +| .+..+++|++|++++|.+.. ++ .+..+++|++|++++|.+
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC--
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCccc
Confidence 99999998888999999999999999998 653 33 45555555555555554433 11 333444444444444443
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.68 E-value=1.1e-19 Score=208.66 Aligned_cols=204 Identities=18% Similarity=0.171 Sum_probs=131.4
Q ss_pred cCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCc-------------ccccCCcccCCCCCCcEee-CccCcCCc
Q 002875 63 QSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY-------------FSGPIPSQFGSFKSLEFLH-LAGNLLND 128 (872)
Q Consensus 63 ~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~-------------~~~~~p~~~~~l~~L~~L~-L~~n~l~~ 128 (872)
..+++|+.|+|++|.+. .+|..++++++|+.|++++|. ..+..|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 34555556666666554 455556666666666655443 4455667777777777777 5655432
Q ss_pred cCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCccccc
Q 002875 129 QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSR 208 (872)
Q Consensus 129 ~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 208 (872)
.|+.+.++.|.+....+ ..|+.|++++|.+++ +|. ++.+++|+.|+|++|.++ .+|..|..
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 22333334443332111 246777777777775 454 777777888888888777 55667777
Q ss_pred CCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCC-CccccCCCCcceeecccccccccCCcc---CCCCCCC
Q 002875 209 VTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV-PESLVQLPSLEILFIWNNYFSGSLPEN---LGRNSKL 284 (872)
Q Consensus 209 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~l~~n~l~~~~p~~---~~~~~~L 284 (872)
+++|+.|+|++|++++ +| .++.+++|+.|+|++|++++.. |..+..+++|+.|++++|.+++..|.. +..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 7888888888887775 45 6777788888888888877665 777777888888888888777654422 1235677
Q ss_pred cEEec
Q 002875 285 RWVDV 289 (872)
Q Consensus 285 ~~L~l 289 (872)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 77653
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.68 E-value=9.8e-18 Score=173.76 Aligned_cols=171 Identities=18% Similarity=0.268 Sum_probs=119.7
Q ss_pred CCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEe
Q 002875 40 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 119 (872)
Q Consensus 40 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L 119 (872)
++.+++.+++++|.+.+.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|.+.+..+ |.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4566777788888887543 57888888899998888874 45 68888888888888888886544 8888888888
Q ss_pred eCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCc
Q 002875 120 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 199 (872)
Q Consensus 120 ~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 199 (872)
++++|.+++. |. +. . .+|++|++++|.+++. +.+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~l-~~-~~------------------------~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IP------------------------S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp ECCSSCCSCC-TT-CC------------------------C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Cc-cc------------------------c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCC
Confidence 8888887653 21 11 1 4556666666666542 24666677777777777766
Q ss_pred ccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCC
Q 002875 200 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 249 (872)
Q Consensus 200 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 249 (872)
+. + .+..+++|++|++++|++++. ..+..+++|+.|++++|++...
T Consensus 142 ~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 142 SI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 54 2 466677777777777777654 5566777777777777776644
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=9.8e-18 Score=198.86 Aligned_cols=155 Identities=22% Similarity=0.312 Sum_probs=65.5
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcc---------cCCccccCCCCCcEEECcCCcCccccCccccC
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG---------HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ 88 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~---------~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~ 88 (872)
+.++.|+|.+|.+... +..+ |+.++|+.|.|.+ ..++.|..++.|++|||++|.+. .+|..+.+
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~~-----l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQAL-----LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCcc-hhhH-----hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 3467777777777653 3222 3333344433322 33555666666666666666665 45555556
Q ss_pred CCCCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEE
Q 002875 89 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 168 (872)
Q Consensus 89 L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ 168 (872)
+++|++|+|++|.++ .+|..|+++++|++|+|++|.|+ .+|..|+.|++|++|++++|.+. .+|..++++++|++|+
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~ 322 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLG 322 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEE
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEe
Confidence 666666666666665 45666666666666666666665 44555555555555555555443 3444455555555555
Q ss_pred eecCCCcccCCccC
Q 002875 169 IAGANLSGSIPKEL 182 (872)
Q Consensus 169 ls~n~l~~~~p~~l 182 (872)
|++|.+++.+|..+
T Consensus 323 L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 323 VEGNPLEKQFLKIL 336 (727)
T ss_dssp CTTSCCCSHHHHHH
T ss_pred CCCCccCCCChHHH
Confidence 55555554444443
No 373
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.67 E-value=2.6e-19 Score=205.74 Aligned_cols=189 Identities=20% Similarity=0.216 Sum_probs=132.1
Q ss_pred cCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccCc-------------CCccCCccCCCCCCCCEEE-ccCccCcc
Q 002875 87 SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNL-------------LNDQIPAELGMLKTVTHME-IGYNFYQG 152 (872)
Q Consensus 87 ~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~-------------l~~~~p~~l~~L~~L~~L~-l~~n~~~~ 152 (872)
..+++|+.|+|++|.+. .+|..++++++|+.|++++|. ..+..|..++.+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 56778888888888886 578888888888888887664 2333444444444444444 333321
Q ss_pred cCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccC
Q 002875 153 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFAD 232 (872)
Q Consensus 153 ~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 232 (872)
..|+.+.+++|.+....+ ..|+.|+|++|.+++. |. |..+++|+.|+|++|.++ .+|..++.
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhc
Confidence 123333344444443221 2477888888888764 54 888888888888888887 56778888
Q ss_pred CCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccC-CccCCCCCCCcEEecCCCeeeecC
Q 002875 233 LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL-PENLGRNSKLRWVDVSTNNFNGSI 298 (872)
Q Consensus 233 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~-p~~~~~~~~L~~L~ls~n~l~~~~ 298 (872)
+++|+.|+|++|++++ +| .+..+++|+.|++++|.+++.. |..+..+++|+.|++++|.+.+..
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 8888888888888886 55 7888888888888888888766 788888888888888888887543
No 374
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=3.4e-17 Score=176.24 Aligned_cols=262 Identities=15% Similarity=0.127 Sum_probs=166.3
Q ss_pred CCCCcEEECCCCCCcccCCccccC-CCCCCEEECcCCcCc--ccCCccccCCCCCcEEECcCCcCccccCccccC-----
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFN-LTSLISLDISRNNFS--GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ----- 88 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~Ls~N~i~--~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~----- 88 (872)
++.++.|.++++- ....-..+.. +++|++|||++|+|. ...+..+. .++.+++..|. +.+.+|.+
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~~---I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMANF---VPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTTE---ECTTTTEEEETTE
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCcccccc---ccccccccccc---cCHHHhccccccc
Confidence 4468888887542 1111122333 778888888888887 22222221 13334444442 22344555
Q ss_pred ---CCCCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccC----cccCCccccC-
Q 002875 89 ---LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFY----QGNIPWQLGN- 160 (872)
Q Consensus 89 ---L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~----~~~~p~~~~~- 160 (872)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++.+|.+..+.+..|....++..+..+.+.. ...-...+.+
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 66666666665 55555555666666666666666666555555565555555444433110 0000111212
Q ss_pred -------------------------CCCCcEEEeecCCCcccCCccC-cCCCCCCEEEccCCCCcccCCcccccCCCCCE
Q 002875 161 -------------------------MSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS 214 (872)
Q Consensus 161 -------------------------l~~L~~L~ls~n~l~~~~p~~l-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 214 (872)
..++..+.+.++-... ....+ ..+++|+.++|++|+++.+.+..|.++++|+.
T Consensus 176 ~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~-~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~ 254 (329)
T 3sb4_A 176 EPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNA-DFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLK 254 (329)
T ss_dssp CCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHH-HHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCE
T ss_pred cccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHH-HHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCE
Confidence 2334445444432111 11111 13688999999999999888889999999999
Q ss_pred EeCcCCCCcCcCCccccCCCCCC-EEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEec
Q 002875 215 LDLSDNRLSGPIPESFADLKNLR-LLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 289 (872)
Q Consensus 215 L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~l 289 (872)
+++.+| ++.+.+.+|.++.+|+ .+++.. .++...+..|.++++|+.++++.|.+....+..|.++++|+.++.
T Consensus 255 l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 255 IKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999988 7777788899999999 999988 677677788999999999999999998888888999999998864
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.64 E-value=1.2e-15 Score=149.86 Aligned_cols=130 Identities=18% Similarity=0.252 Sum_probs=110.9
Q ss_pred cEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCc-cccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 21 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPG-GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 21 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~-~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
+.+++++|.+.. +|..+.. +|++|++++|.|.+..+. .|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 789999999964 5655553 899999999999877664 488999999999999999988888999999999999999
Q ss_pred CcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCccc
Q 002875 100 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN 153 (872)
Q Consensus 100 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~ 153 (872)
|.+++..|..|.++++|++|+|++|.+++..|..+..+++|++|++++|.+.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 999988888899999999999999999888888888888888888887776654
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.63 E-value=6.1e-17 Score=192.01 Aligned_cols=168 Identities=21% Similarity=0.243 Sum_probs=122.1
Q ss_pred CCcEEECCCCCCcc---------cCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCC
Q 002875 19 ELVDLNLSHNSFSG---------QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQL 89 (872)
Q Consensus 19 ~L~~L~L~~n~i~~---------~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L 89 (872)
.++.++|++|.|.+ +.+..|..++.|++|+|++|.+. .+|..+..+++|++|+|++|.++ .+|..|.+|
T Consensus 192 ~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 269 (727)
T 4b8c_D 192 LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNL 269 (727)
T ss_dssp ------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGG
T ss_pred HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCC
Confidence 34555555555543 45788999999999999999998 56667779999999999999999 789999999
Q ss_pred CCCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCC-CcEEE
Q 002875 90 EHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSE-VQYLD 168 (872)
Q Consensus 90 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~-L~~L~ 168 (872)
++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..|+.+++|+.|++++|.+.+.+|..+..+.. +..|+
T Consensus 270 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~ 347 (727)
T 4b8c_D 270 SNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFY 347 (727)
T ss_dssp TTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHh
Confidence 99999999999999 67999999999999999999996 67888999999999999999999888877654422 23467
Q ss_pred eecCCCcccCCccCcCCCCCCEEEccCC
Q 002875 169 IAGANLSGSIPKELSNLTKLESLFLFRN 196 (872)
Q Consensus 169 ls~n~l~~~~p~~l~~l~~L~~L~L~~n 196 (872)
+++|.+++.+|..+ +.|+++.|
T Consensus 348 l~~N~l~~~~p~~l------~~l~l~~n 369 (727)
T 4b8c_D 348 LRDNRPEIPLPHER------RFIEINTD 369 (727)
T ss_dssp HHHCCCCCCCCCC---------------
T ss_pred hccCcccCcCcccc------ceeEeecc
Confidence 88898888777643 45556555
No 377
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=5.1e-17 Score=173.44 Aligned_cols=134 Identities=9% Similarity=0.039 Sum_probs=97.7
Q ss_pred cchhhhccCCCCCceeeeecCCCcEEEEEEeeccch---------------hHH--------HHHHHHHHhhccCCCCce
Q 002875 610 STECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------------RIK--------IVSEFITRIGTVRHKNLI 666 (872)
Q Consensus 610 ~~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~---------------~~~--------~~~~e~~~l~~l~H~niv 666 (872)
|.....||.|++|.||+|...+|+.||||+++.+.. ... ...+|...|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 558889999999999999999999999998753210 011 123456666666544432
Q ss_pred eEEEEEecCCeeEEEEcccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCC----
Q 002875 667 RLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---- 742 (872)
Q Consensus 667 ~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~---- 742 (872)
...-+.. ...+|||||+++++|.++... .....++.|++.|+.|||+. +||||||||.|||+++++.
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~----~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~d~ 247 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSV----PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAEDP 247 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCC----SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSSCT
T ss_pred CCeeeec--cCceEEEEecCCccHhhhccc----HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCcccc
Confidence 2111111 123799999999988765432 23356789999999999998 9999999999999987763
Q ss_pred ------eeEccccccc
Q 002875 743 ------PHLAEFGFKY 752 (872)
Q Consensus 743 ------~ki~dfg~~~ 752 (872)
+.|+||+-+.
T Consensus 248 ~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 248 SSITLTPIIIXFPQMV 263 (397)
T ss_dssp TSEEEEEEECCCTTCE
T ss_pred cccccceEEEEeCCcc
Confidence 8899999653
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=1.3e-15 Score=146.45 Aligned_cols=111 Identities=17% Similarity=0.172 Sum_probs=76.9
Q ss_pred CCCCcEEECCCCCCc-ccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEE
Q 002875 17 FNELVDLNLSHNSFS-GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 95 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L 95 (872)
.+.|+.|+|++|.++ +.+|..|..+++|++|++++|.+.+. ..|..+++|++|++++|.+.+.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 456777777777776 45566677777777777777777654 567777777777777777776566666667777777
Q ss_pred EccCCcccccC-CcccCCCCCCcEeeCccCcCCcc
Q 002875 96 NLAGSYFSGPI-PSQFGSFKSLEFLHLAGNLLNDQ 129 (872)
Q Consensus 96 ~L~~n~~~~~~-p~~~~~l~~L~~L~L~~n~l~~~ 129 (872)
+|++|.+.+.. +..|..+++|++|++++|.+++.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 135 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNL 135 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcch
Confidence 77777776532 25667777777777777766543
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=1e-13 Score=152.18 Aligned_cols=265 Identities=8% Similarity=0.026 Sum_probs=188.0
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
...++.+.+.. .++.+...+|.+. +|+.+++..| +..+...+|.++ +|+.+++.. .+..+.+.+|.++.+|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 46677777764 4666777888874 7888888766 777777888885 688888875 56667777888888899999
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcc
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 176 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~ 176 (872)
|++|.+..+...+|. ..+|+.+.|..+ ++.+....|..+++|+.+.+..+ +...-...|.+ .+|+.+++ .+++..
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccE
Confidence 988888877677776 588888888744 66777777888888888888765 33233344555 67888877 345665
Q ss_pred cCCccCcCCCCCCEEEccCCCCc-----ccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCC
Q 002875 177 SIPKELSNLTKLESLFLFRNQLA-----GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 251 (872)
Q Consensus 177 ~~p~~l~~l~~L~~L~L~~n~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 251 (872)
.....|..+++|+.+++..|.+. .+.+..|..+++|+.+++. +.++.+...+|.++.+|+.+.+..+ +...-.
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~ 339 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINF 339 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECT
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcH
Confidence 56667777888888888776654 3555677778888888877 3466566677777778888877544 554555
Q ss_pred ccccCCCCcceeecccccccccCCccCCCCC-CCcEEecCCCee
Q 002875 252 ESLVQLPSLEILFIWNNYFSGSLPENLGRNS-KLRWVDVSTNNF 294 (872)
Q Consensus 252 ~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~-~L~~L~ls~n~l 294 (872)
..|.++ +|+.+++.+|.+....+..|..++ .++.+.+..+.+
T Consensus 340 ~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 340 SAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred HhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 667777 777777777766655555555553 556666655543
No 380
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.59 E-value=6.7e-15 Score=144.56 Aligned_cols=130 Identities=19% Similarity=0.264 Sum_probs=85.0
Q ss_pred CEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCc-cccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCcc
Q 002875 45 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPA-EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 123 (872)
Q Consensus 45 ~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~-~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 123 (872)
+++++++|.+. .+|..+.. +|++|++++|.+.+..+. .|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 57777777775 34544432 677777777777755543 367777777777777777776677777777777777777
Q ss_pred CcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCccc
Q 002875 124 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ 201 (872)
Q Consensus 124 n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 201 (872)
|.+++..+..|. ++++|++|++++|.+++..|..+..+++|++|++++|.+.+.
T Consensus 88 N~l~~~~~~~~~------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFL------------------------GLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSST------------------------TCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhc------------------------CCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 777655554444 455555555555666555566666666666666666666543
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=1.1e-15 Score=143.65 Aligned_cols=127 Identities=17% Similarity=0.180 Sum_probs=100.8
Q ss_pred CCCCcEEECCCCCCc-ccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEE
Q 002875 17 FNELVDLNLSHNSFS-GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 95 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L 95 (872)
.+.|+.|++++|.++ +.+|..+..+++|++|++++|.+.+. ..|..+++|++|++++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356889999999987 67777888899999999999988866 678888999999999998887677777788889999
Q ss_pred EccCCccccc-CCcccCCCCCCcEeeCccCcCCccCC---ccCCCCCCCCEEEc
Q 002875 96 NLAGSYFSGP-IPSQFGSFKSLEFLHLAGNLLNDQIP---AELGMLKTVTHMEI 145 (872)
Q Consensus 96 ~L~~n~~~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p---~~l~~L~~L~~L~l 145 (872)
++++|.+.+. .+..++.+++|++|++++|.+++..+ ..++.+++|+.|++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 9999888763 34778888888888888888876544 34555555555554
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=3.3e-15 Score=143.53 Aligned_cols=134 Identities=18% Similarity=0.190 Sum_probs=95.0
Q ss_pred CCCCCCEEECcCCcCc-ccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcE
Q 002875 40 NLTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 118 (872)
Q Consensus 40 ~l~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 118 (872)
..++|++|++++|.+. +.+|..|..+++|++|++++|.+++. ..+..+++|++|+|++|.+.+.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999987 56777788889999999999988865 67888889999999999888777877778889999
Q ss_pred eeCccCcCCccCC-ccCCCCCCCCEEEccCccCcccCC---ccccCCCCCcEEEeecCCCc
Q 002875 119 LHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIP---WQLGNMSEVQYLDIAGANLS 175 (872)
Q Consensus 119 L~L~~n~l~~~~p-~~l~~L~~L~~L~l~~n~~~~~~p---~~~~~l~~L~~L~ls~n~l~ 175 (872)
|++++|.+++... ..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 9999888865322 455555555555555555443332 23444444444444444443
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=1.4e-14 Score=142.31 Aligned_cols=128 Identities=23% Similarity=0.285 Sum_probs=108.8
Q ss_pred CcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 20 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 20 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
-+.+++++|.+..+ |..+. ++|++|+|++|.|. .+|..|..+++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 12 ~~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 12 DTVVRCSNKGLKVL-PKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TTEEECTTSCCSSC-CSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEcCCCCCCcC-CCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 36889999999754 55554 68999999999998 5678899999999999999999988888899999999999999
Q ss_pred CcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCc
Q 002875 100 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 151 (872)
Q Consensus 100 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~ 151 (872)
|.+++..|..|.++++|++|+|++|.++...+..|..+++|+.|++++|.+.
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 9999888888999999999999999998776667777777887777777654
No 384
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=2e-15 Score=162.31 Aligned_cols=240 Identities=14% Similarity=0.054 Sum_probs=171.1
Q ss_pred CCCCcEEECCCCCCc--ccCCccccCCCCCCEEECcCCcCcccCCccccC--------CCCCcEEECcCCcCccccCccc
Q 002875 17 FNELVDLNLSHNSFS--GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQS--------LRNLLVLDAFSNSFSGSVPAEI 86 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~--~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~--------l~~L~~LdL~~n~l~~~~p~~~ 86 (872)
++.|++|||++|+|. ...+..+. .++.+.+..|. +.+.+|.+ +++|+.|+|.+ .++.+.+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~~---I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMANF---VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTTE---ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCcccccc---ccccccccccc---cCHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 678999999999998 33332222 24555555553 33456666 77777777777 6666666677
Q ss_pred cCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccCc----CCccCCccCCCCC------------------------
Q 002875 87 SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNL----LNDQIPAELGMLK------------------------ 138 (872)
Q Consensus 87 ~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~----l~~~~p~~l~~L~------------------------ 138 (872)
.++++|+.|++++|.+..+.+.+|.+..++..+.+..+. ........|....
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 777777777777777776777777777777666665421 1112222232222
Q ss_pred --CCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCC-EE
Q 002875 139 --TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK-SL 215 (872)
Q Consensus 139 --~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-~L 215 (872)
++..+.+.++............+++|+.|++++|++....+..|.++++|+.|++..| +..+.+.+|.++++|+ .+
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 3334444332111111111123789999999999999877788999999999999998 8888888999999999 99
Q ss_pred eCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeec
Q 002875 216 DLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFI 265 (872)
Q Consensus 216 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 265 (872)
++.+ .++.+.+.+|.++++|+.++++.|.+....+..|.++++|+.++.
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 9998 787778899999999999999999999888889999999998863
No 385
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=1.2e-13 Score=151.60 Aligned_cols=243 Identities=9% Similarity=0.055 Sum_probs=205.9
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEc
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 97 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L 97 (872)
..|+.++|..+ +..+...+|.+ .+|+.+++.. .+..+.+.+|.++++|+.+++..|.++.+...+|. ..+|+.+.|
T Consensus 135 ~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 135 SQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 57999999877 88888899998 4799999985 68878889999999999999999999977666777 689999999
Q ss_pred cCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCc--
Q 002875 98 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS-- 175 (872)
Q Consensus 98 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~-- 175 (872)
..+ +..+...+|.++++|+.+++..| ++.+....|.. .+|+.+.+..+ +...-+..|.++.+|+.+++.++.+.
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~~-i~~I~~~aF~~c~~L~~l~l~~~~~~~~ 286 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPNG-VTNIASRAFYYCPELAEVTTYGSTFNDD 286 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEETT-CCEECTTTTTTCTTCCEEEEESSCCCCC
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCCC-ccEEChhHhhCCCCCCEEEeCCccccCC
Confidence 854 77788899999999999999975 66677778888 89999999544 44445677889999999999988765
Q ss_pred ---ccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCc
Q 002875 176 ---GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 252 (872)
Q Consensus 176 ---~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~ 252 (872)
...+..|..+++|+.+++. +.+..+....|.++++|+.+.+..| ++.+...+|.++ +|+.++++.|......+.
T Consensus 287 ~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~ 363 (401)
T 4fdw_A 287 PEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEK 363 (401)
T ss_dssp TTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCS
T ss_pred cccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccc
Confidence 4566789999999999998 5588788889999999999999665 776778899999 999999999998877777
Q ss_pred cccCCC-Ccceeeccccccc
Q 002875 253 SLVQLP-SLEILFIWNNYFS 271 (872)
Q Consensus 253 ~l~~l~-~L~~L~l~~n~l~ 271 (872)
.|..++ ++..|++..+.+.
T Consensus 364 ~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 364 VWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SCCCSCTTCCEEEECGGGHH
T ss_pred cccCCCCCccEEEeCHHHHH
Confidence 788885 7888988877654
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=2.5e-14 Score=138.67 Aligned_cols=131 Identities=17% Similarity=0.193 Sum_probs=103.7
Q ss_pred CcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 20 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 20 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
.+.+++++|++..+ |..+. ++|++|++++|.+.+..+..|..+++|++|++++|.+++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~~-p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSC-CTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccC-CCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 46788999988754 44443 6889999999999877777788899999999999998877666788889999999999
Q ss_pred CcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCccc
Q 002875 100 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN 153 (872)
Q Consensus 100 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~ 153 (872)
|.+++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|.+.+.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 998877777788889999999999888766555566667777777666665543
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=4.5e-15 Score=139.36 Aligned_cols=110 Identities=19% Similarity=0.269 Sum_probs=82.4
Q ss_pred CCCCCEEECcCCcCc-ccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEe
Q 002875 41 LTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 119 (872)
Q Consensus 41 l~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L 119 (872)
.++|+.|++++|.+. +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+.+.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467889999999887 67777888888899999988888765 678888888888888888887677777778888888
Q ss_pred eCccCcCCcc-CCccCCCCCCCCEEEccCccCcc
Q 002875 120 HLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQG 152 (872)
Q Consensus 120 ~L~~n~l~~~-~p~~l~~L~~L~~L~l~~n~~~~ 152 (872)
++++|.+++. .+..++.+++|++|++++|.+.+
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~ 127 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTN 127 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGG
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccc
Confidence 8888887653 22445555555555555444443
No 388
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.53 E-value=6.7e-14 Score=137.30 Aligned_cols=127 Identities=26% Similarity=0.342 Sum_probs=85.1
Q ss_pred CEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCccC
Q 002875 45 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 124 (872)
Q Consensus 45 ~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 124 (872)
+++++++|.+.. +|..+. ++|++|++++|.++ .+|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 577888888774 454432 57788888888876 56677778888888888888887777777788888888888888
Q ss_pred cCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEEEccCCCCc
Q 002875 125 LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 199 (872)
Q Consensus 125 ~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 199 (872)
.++...+..|..+++ |++|++++|.+++..+..|..+++|+.|++++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~------------------------L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKS------------------------LRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTT------------------------CCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCC------------------------CCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 777655555555444 555555555555444444555666666666666554
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.51 E-value=1.3e-13 Score=133.61 Aligned_cols=128 Identities=15% Similarity=0.154 Sum_probs=78.8
Q ss_pred CCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCcc
Q 002875 44 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 123 (872)
Q Consensus 44 L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 123 (872)
.+.+++++|.+.. +|..+ .++|++|++++|.+.+..+..|.++++|++|+|++|.+++..+..|+.+++|++|++++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 4677888887764 34332 35778888888887766666677778888888888877766666677777888888877
Q ss_pred CcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCC
Q 002875 124 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 174 (872)
Q Consensus 124 n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l 174 (872)
|.+++..+..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 136 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 136 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCe
Confidence 777655554455555555554444444432222233334444444444433
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=9.3e-14 Score=134.36 Aligned_cols=86 Identities=17% Similarity=0.050 Sum_probs=41.4
Q ss_pred ccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCc
Q 002875 38 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 117 (872)
Q Consensus 38 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 117 (872)
+.+..+|++|++++|.+... |......++|++||+++|.+++. ..|..+++|++|+|++|.+++..+..|+.+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 44445555555555555432 32222222555555555555432 3455555555555555555543333335555555
Q ss_pred EeeCccCcC
Q 002875 118 FLHLAGNLL 126 (872)
Q Consensus 118 ~L~L~~n~l 126 (872)
+|++++|.+
T Consensus 92 ~L~L~~N~i 100 (176)
T 1a9n_A 92 ELILTNNSL 100 (176)
T ss_dssp EEECCSCCC
T ss_pred EEECCCCcC
Confidence 555555555
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.45 E-value=1e-13 Score=134.08 Aligned_cols=126 Identities=17% Similarity=0.121 Sum_probs=100.5
Q ss_pred CCCCcEEECCCCCCcccCCccccCCC-CCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLT-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 95 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L 95 (872)
...|+.|+|++|.++.+ |. +..+. +|++|++++|.|.+. ..|..+++|++|++++|.+++..+..|..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 57899999999999865 54 55555 999999999999976 689999999999999999997655566999999999
Q ss_pred EccCCcccccCCc--ccCCCCCCcEeeCccCcCCccCCcc----CCCCCCCCEEEccCc
Q 002875 96 NLAGSYFSGPIPS--QFGSFKSLEFLHLAGNLLNDQIPAE----LGMLKTVTHMEIGYN 148 (872)
Q Consensus 96 ~L~~n~~~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~----l~~L~~L~~L~l~~n 148 (872)
+|++|.+.. +|. .+..+++|++|++++|.+.. .|.. +..+++|+.|+++.|
T Consensus 94 ~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 94 ILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKV 150 (176)
T ss_dssp ECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEEC
T ss_pred ECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcC
Confidence 999999964 555 78999999999999999864 3332 444444444444443
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=6.1e-13 Score=127.53 Aligned_cols=106 Identities=23% Similarity=0.236 Sum_probs=90.4
Q ss_pred CcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 20 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 20 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
.+++++++|.++. +|..+. ++|++|+|++|.|++..|+.|..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999975 455553 7899999999999988888899999999999999999877777788999999999999
Q ss_pred CcccccCCcccCCCCCCcEeeCccCcCCc
Q 002875 100 SYFSGPIPSQFGSFKSLEFLHLAGNLLND 128 (872)
Q Consensus 100 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 128 (872)
|.+++..+..|.++++|++|+|++|.+..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 99988777778899999999999998753
No 393
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=1e-12 Score=126.47 Aligned_cols=105 Identities=23% Similarity=0.226 Sum_probs=88.1
Q ss_pred CcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 20 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 20 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
-+.+++++|.+.. +|..+. ++|++|+|++|+|.+..|..|..+++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 4788999999864 455554 7899999999999888888899999999999999999876666678899999999999
Q ss_pred CcccccCCcccCCCCCCcEeeCccCcCC
Q 002875 100 SYFSGPIPSQFGSFKSLEFLHLAGNLLN 127 (872)
Q Consensus 100 n~~~~~~p~~~~~l~~L~~L~L~~n~l~ 127 (872)
|.+.+..+..|..+++|++|+|++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 9998766667888999999999998875
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.40 E-value=1.7e-11 Score=135.16 Aligned_cols=316 Identities=12% Similarity=0.046 Sum_probs=153.4
Q ss_pred ccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccC
Q 002875 32 GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG 111 (872)
Q Consensus 32 ~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~ 111 (872)
.+...+|.++++|+.+.|.. .++.+...+|.++++|+.+++..+ ++.+...+|.++.+|+.+.+..+ +......+|.
T Consensus 61 sIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~ 137 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFK 137 (394)
T ss_dssp EECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTT
T ss_pred EhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeee
Confidence 34445555555555555542 244444555555555555555433 33334445555555555444432 2223334444
Q ss_pred CCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCCccCcCCCCCCEE
Q 002875 112 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESL 191 (872)
Q Consensus 112 ~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L 191 (872)
+...++....... ....... |.++.+|+.+.+.++ +.......|..+++|+.+
T Consensus 138 ~~~~~~~~~~~~~--~~i~~~a------------------------F~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i 190 (394)
T 4fs7_A 138 GCDFKEITIPEGV--TVIGDEA------------------------FATCESLEYVSLPDS-METLHNGLFSGCGKLKSI 190 (394)
T ss_dssp TCCCSEEECCTTC--CEECTTT------------------------TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBC
T ss_pred cccccccccCccc--cccchhh------------------------hcccCCCcEEecCCc-cceeccccccCCCCceEE
Confidence 4433222222111 1122223 344445555554432 222333445555556655
Q ss_pred EccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeeccccccc
Q 002875 192 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS 271 (872)
Q Consensus 192 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~ 271 (872)
.+..+ +..+....|.++..|+.+.+..+... +.+.+....+|+.+.+... +.......+..+..|+.+.+..+...
T Consensus 191 ~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~ 266 (394)
T 4fs7_A 191 KLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR 266 (394)
T ss_dssp CCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE
T ss_pred EcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce
Confidence 55444 33344455566666666555544322 2222333345555555432 22222334555566666666544322
Q ss_pred ccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCC
Q 002875 272 GSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFS 351 (872)
Q Consensus 272 ~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 351 (872)
.....|..+..++.+....+.+. ...+.....|..+.+..+ +...-..+|.+|++|+.+++.++ ++.+-...|.
T Consensus 267 -i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 340 (394)
T 4fs7_A 267 -IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFR 340 (394)
T ss_dssp -ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTT
T ss_pred -eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhcc
Confidence 33444555555555555444321 112333445555554432 33333455667777777777543 5545556677
Q ss_pred CCCCCcEEEcCCCcCCCCCCchhhhhcccccccccCC
Q 002875 352 QLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 388 (872)
Q Consensus 352 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~n 388 (872)
++.+|+.+++..| +...-..+|.++.+|+.+++..+
T Consensus 341 ~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 341 GCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 7777777777655 44344456666666776666544
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.39 E-value=1.8e-15 Score=149.67 Aligned_cols=130 Identities=15% Similarity=0.193 Sum_probs=86.4
Q ss_pred CCCCcEEECCCCCCcccCCc------cccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCC
Q 002875 17 FNELVDLNLSHNSFSGQFPV------EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 90 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~------~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~ 90 (872)
...++.++++.+.+++..|. .|..+++|++|+|++|.+.+ +| .+..+++|++|++++|.+. .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 35666666777776666665 77777788888888887775 45 6777777888888777776 4566666667
Q ss_pred CCCEEEccCCcccccCCcccCCCCCCcEeeCccCcCCccCC-ccCCCCCCCCEEEccCccCc
Q 002875 91 HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQ 151 (872)
Q Consensus 91 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~L~~L~~L~l~~n~~~ 151 (872)
+|++|+|++|.+.+ +| .+..+++|++|++++|.++...+ ..+..+++|++|++++|.+.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 77777777777765 34 57777777777777777754322 23444444444444444443
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.35 E-value=3.6e-15 Score=147.48 Aligned_cols=155 Identities=20% Similarity=0.282 Sum_probs=101.3
Q ss_pred ccCCCCCCEEECcCCcCcccCCc------cccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccC
Q 002875 38 IFNLTSLISLDISRNNFSGHFPG------GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG 111 (872)
Q Consensus 38 ~~~l~~L~~L~Ls~N~i~~~~~~------~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~ 111 (872)
+.....++.++++.|.+.+..|. .|..+++|++|++++|.+.+ +| .+.++++|++|+|++|.+. .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44556777777777777776665 78888888888888888875 55 7788888888888888887 4676777
Q ss_pred CCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcccCC-ccCcCCCCCCE
Q 002875 112 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP-KELSNLTKLES 190 (872)
Q Consensus 112 ~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p-~~l~~l~~L~~ 190 (872)
.+++|++|++++|.+++. | .+.. +++|++|++++|.+.+..+ ..+..+++|++
T Consensus 91 ~~~~L~~L~L~~N~l~~l-~-~~~~------------------------l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 91 VADTLEELWISYNQIASL-S-GIEK------------------------LVNLRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp HHHHCSEEEEEEEECCCH-H-HHHH------------------------HHHSSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred cCCcCCEEECcCCcCCcC-C-cccc------------------------CCCCCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 778888888888877642 2 3444 4445555555555543221 34555566666
Q ss_pred EEccCCCCcccCCc----------ccccCCCCCEEeCcCCCCc
Q 002875 191 LFLFRNQLAGQVPW----------EFSRVTTLKSLDLSDNRLS 223 (872)
Q Consensus 191 L~L~~n~l~~~~~~----------~~~~l~~L~~L~L~~N~l~ 223 (872)
|++++|.+.+..|. .+..+++|+.|| +|.++
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 66666665544332 256667777665 44443
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.35 E-value=4.1e-12 Score=121.72 Aligned_cols=106 Identities=23% Similarity=0.283 Sum_probs=84.1
Q ss_pred CCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCcc
Q 002875 44 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 123 (872)
Q Consensus 44 L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 123 (872)
.+.+++++|.+.. +|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4688899888875 55544 37888899999988887788888888899999988888877777788888888888888
Q ss_pred CcCCccCCccCCCCCCCCEEEccCccCcc
Q 002875 124 NLLNDQIPAELGMLKTVTHMEIGYNFYQG 152 (872)
Q Consensus 124 n~l~~~~p~~l~~L~~L~~L~l~~n~~~~ 152 (872)
|.+++..+..|..+++|++|++++|.+..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 88887666667777777777777776543
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.35 E-value=7.7e-11 Score=129.81 Aligned_cols=323 Identities=10% Similarity=0.071 Sum_probs=211.1
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
...|+.+.|.. .++.+...+|.++++|+.++|..+ +..+...+|.++..|+.+.+..+ +..+...+|.+...+....
T Consensus 70 c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~ 146 (394)
T 4fs7_A 70 CRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITI 146 (394)
T ss_dssp CTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEEC
T ss_pred CCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccccccc
Confidence 36899999985 488888899999999999999865 67677789999999999887655 5545666787776555444
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCcc
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 176 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~ 176 (872)
... ...+...+|.++++|+.+.+..+ +..+....|....+|+.+.+..+ +...-...+.+...|+.+.+..+...
T Consensus 147 ~~~--~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~- 221 (394)
T 4fs7_A 147 PEG--VTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY- 221 (394)
T ss_dssp CTT--CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-
T ss_pred Ccc--ccccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE-
Confidence 333 33345678999999999999765 34556667888888888877665 22233445666677776666554332
Q ss_pred cCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccC
Q 002875 177 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 256 (872)
Q Consensus 177 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 256 (872)
+.+......+|+.+.+..+ +..+....|..+..|+.+.+..+... .....|..+..++.+....+.+. ...+..
T Consensus 222 -i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~ 295 (394)
T 4fs7_A 222 -LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYG 295 (394)
T ss_dssp -ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTT
T ss_pred -eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccc
Confidence 2223333456777776533 33344456777777787777766443 45566777777777766554332 234666
Q ss_pred CCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCCCCCCCCCCCCcEEE
Q 002875 257 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 336 (872)
Q Consensus 257 l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 336 (872)
+.+|+.+.+..+ +...-...|..+.+|+.+++..+ + ...-..+|.+|++|+.+.
T Consensus 296 ~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v------------------------~~I~~~aF~~c~~L~~i~ 349 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-V------------------------EEIGKRSFRGCTSLSNIN 349 (394)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-C------------------------CEECTTTTTTCTTCCEEC
T ss_pred cccccccccccc-cceechhhhcCCCCCCEEEeCCc-c------------------------cEEhHHhccCCCCCCEEE
Confidence 777777777543 44344555666667776666432 2 112234677788888888
Q ss_pred cCCCccccccCccCCCCCCCcEEEcCCCcCCCCCCchhhhhccccc
Q 002875 337 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEY 382 (872)
Q Consensus 337 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 382 (872)
+..+ ++.+-...|.++++|+.+++..+- . .+..+|.+.++|+.
T Consensus 350 lp~~-l~~I~~~aF~~C~~L~~i~lp~~~-~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 350 FPLS-LRKIGANAFQGCINLKKVELPKRL-E-QYRYDFEDTTKFKW 392 (394)
T ss_dssp CCTT-CCEECTTTBTTCTTCCEEEEEGGG-G-GGGGGBCTTCEEEE
T ss_pred ECcc-ccEehHHHhhCCCCCCEEEECCCC-E-EhhheecCCCCCcE
Confidence 8766 665666778888888888876542 2 22345555566554
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.33 E-value=7.4e-12 Score=120.35 Aligned_cols=105 Identities=19% Similarity=0.228 Sum_probs=81.7
Q ss_pred CCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCcc
Q 002875 44 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 123 (872)
Q Consensus 44 L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 123 (872)
-+.+++++|.+. .+|..+. ++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 368888888886 4565553 7888888888888887788888888888888888888876666778888888888888
Q ss_pred CcCCccCCccCCCCCCCCEEEccCccCc
Q 002875 124 NLLNDQIPAELGMLKTVTHMEIGYNFYQ 151 (872)
Q Consensus 124 n~l~~~~p~~l~~L~~L~~L~l~~n~~~ 151 (872)
|.+++..+..|..+++|++|++++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 8887665555777777777776666554
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.18 E-value=5.5e-11 Score=128.70 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=79.3
Q ss_pred EEECCCC-CCcccCCccccCCCCCCEEECcC-CcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEccC
Q 002875 22 DLNLSHN-SFSGQFPVEIFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 99 (872)
Q Consensus 22 ~L~L~~n-~i~~~~~~~~~~l~~L~~L~Ls~-N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~~ 99 (872)
.++++++ +++. +|. +..+++|++|+|++ |.|.++.++.|..+++|++|+|++|++++..|..|.+|++|++|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577777 7765 455 88888888888885 888877777788888888888888888877777788888888888888
Q ss_pred CcccccCCcccCCCCCCcEeeCccCcCC
Q 002875 100 SYFSGPIPSQFGSFKSLEFLHLAGNLLN 127 (872)
Q Consensus 100 n~~~~~~p~~~~~l~~L~~L~L~~n~l~ 127 (872)
|.+.+..+..|..++ |+.|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 888766666666665 888888877764
No 401
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.15 E-value=8.8e-11 Score=121.59 Aligned_cols=137 Identities=17% Similarity=0.042 Sum_probs=107.5
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccc-hhHHHHHHHHHHhhccC-CCCceeEEEEEecCCeeEEEEcccCCCC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGN 689 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~g~ 689 (872)
.....+.|+.+.||+.... |+.+++|...... .....+.+|++.++.+. |..+.++++++.+.+..|+||||++|.+
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL 96 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence 5667777888999998754 7899999986432 22345788899998885 6778889999988889999999999999
Q ss_pred hHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCC------------------------------------------------
Q 002875 690 LSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC------------------------------------------------ 721 (872)
Q Consensus 690 L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~------------------------------------------------ 721 (872)
+.+.+.. ..+...++.+++++++.||+..
T Consensus 97 l~~~~~~---~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (263)
T 3tm0_A 97 CSEEYED---EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDF 173 (263)
T ss_dssp HHHHCCT---TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHH
T ss_pred hhhccCC---cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHH
Confidence 9876422 1234578889999999999810
Q ss_pred --------CCCcccCCCCCCCeeeCCCCCeeEccccccc
Q 002875 722 --------YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 752 (872)
Q Consensus 722 --------~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~ 752 (872)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 174 l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 174 LKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876667799999763
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.14 E-value=7.5e-13 Score=143.77 Aligned_cols=187 Identities=14% Similarity=0.125 Sum_probs=99.2
Q ss_pred CCCCcEEECCCCCCcccCCccccC-----CCCCCEEECcCCcCcccCCccc-cCCCCCcEEECcCCcCccccCccc----
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFN-----LTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDAFSNSFSGSVPAEI---- 86 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~-----l~~L~~L~Ls~N~i~~~~~~~~-~~l~~L~~LdL~~n~l~~~~p~~~---- 86 (872)
.+.|+.|+|++|.|+......+.. .++|++|+|++|.+.......+ ..+++|+.|||++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 356777777777776443333322 2567777777777653222222 345566777777776654333333
Q ss_pred -cCCCCCCEEEccCCccccc----CCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCC
Q 002875 87 -SQLEHLKVLNLAGSYFSGP----IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM 161 (872)
Q Consensus 87 -~~L~~L~~L~L~~n~~~~~----~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l 161 (872)
....+|++|+|++|.++.. ++..+..+++|++|+|++|.+.+.... .++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--------------------~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--------------------LLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--------------------HHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--------------------HHHHHHhcC
Confidence 2346677777777766431 233345566666666666665431100 122334455
Q ss_pred CCCcEEEeecCCCccc----CCccCcCCCCCCEEEccCCCCcccCCcccccC---C--CCCEEe--CcCCCCc
Q 002875 162 SEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAGQVPWEFSRV---T--TLKSLD--LSDNRLS 223 (872)
Q Consensus 162 ~~L~~L~ls~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l---~--~L~~L~--L~~N~l~ 223 (872)
++|+.|++++|.+... ++..+...++|++|+|++|.|+..-...+..+ . .|+.+. +..|.++
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 6677777777776542 23334455677778888777764332233222 1 155555 5555554
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.10 E-value=1.3e-12 Score=141.99 Aligned_cols=111 Identities=18% Similarity=0.149 Sum_probs=71.1
Q ss_pred CCCCCEEEccCccCcc----cCCccccCCCCCcEEEeecCCCccc----CCccCcCCCCCCEEEccCCCCcccC----Cc
Q 002875 137 LKTVTHMEIGYNFYQG----NIPWQLGNMSEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAGQV----PW 204 (872)
Q Consensus 137 L~~L~~L~l~~n~~~~----~~p~~~~~l~~L~~L~ls~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~~----~~ 204 (872)
.++|+.|++++|.+.. .++..+...++|++|||++|.+... ++..+...++|++|+|++|.++... +.
T Consensus 154 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~ 233 (372)
T 3un9_A 154 QCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALAR 233 (372)
T ss_dssp TCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHH
T ss_pred CCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHH
Confidence 3445555555554432 2334456778899999999988642 3556677889999999999997532 23
Q ss_pred ccccCCCCCEEeCcCCCCcCcCCccccCCC-----CCCEEE--cccccCC
Q 002875 205 EFSRVTTLKSLDLSDNRLSGPIPESFADLK-----NLRLLS--LMYNEMS 247 (872)
Q Consensus 205 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-----~L~~L~--L~~n~l~ 247 (872)
.+...++|++|+|++|.|+......+..+. .|+.+. +..+.+.
T Consensus 234 ~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 234 AAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 345678999999999999865444443332 266666 5555554
No 404
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=2e-10 Score=118.91 Aligned_cols=128 Identities=16% Similarity=0.102 Sum_probs=98.4
Q ss_pred cCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCc--eeEEEEEecCCeeEEEEcccCCCChHHHh
Q 002875 617 ARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL--IRLLGFCYNRHQAYLLYDYLPNGNLSEKI 694 (872)
Q Consensus 617 g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~ni--v~l~~~~~~~~~~~lv~ey~~~g~L~~~l 694 (872)
+.|..+.||+....+|..++||..... ....+.+|++.++.+++.++ .++++++..++..++||||++|.++. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 456669999998888899999997643 23457788898888865554 45888888888899999999998884 2
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHHhhCC-----------------------------------------------------
Q 002875 695 RTKRDWAAKYKIVLGVARGLCFLHHDC----------------------------------------------------- 721 (872)
Q Consensus 695 ~~~~~~~~~~~i~~~i~~gl~~lH~~~----------------------------------------------------- 721 (872)
. ..+ ...++.++++.++.||+..
T Consensus 105 ~-~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 180 (264)
T 1nd4_A 105 S-HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPD 180 (264)
T ss_dssp S-CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCS
T ss_pred C-cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCC
Confidence 2 122 2367788888888888742
Q ss_pred --CCCcccCCCCCCCeeeCCCCCeeEccccccc
Q 002875 722 --YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 752 (872)
Q Consensus 722 --~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~ 752 (872)
.+.++|+|++|.||+++++..++|.|||.+.
T Consensus 181 ~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 181 GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp SCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999864
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.09 E-value=2.9e-10 Score=123.00 Aligned_cols=102 Identities=18% Similarity=0.131 Sum_probs=80.2
Q ss_pred EEECcCC-cCcccCCccccCCCCCcEEECcC-CcCccccCccccCCCCCCEEEccCCcccccCCcccCCCCCCcEeeCcc
Q 002875 46 SLDISRN-NFSGHFPGGIQSLRNLLVLDAFS-NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 123 (872)
Q Consensus 46 ~L~Ls~N-~i~~~~~~~~~~l~~L~~LdL~~-n~l~~~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 123 (872)
.++++++ .+.+ +|. +..+++|++|+|++ |.+.+..|..|.+|++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 5688887 7874 666 88888999999986 888887778889999999999999999888888889999999999999
Q ss_pred CcCCccCCccCCCCCCCCEEEccCccC
Q 002875 124 NLLNDQIPAELGMLKTVTHMEIGYNFY 150 (872)
Q Consensus 124 n~l~~~~p~~l~~L~~L~~L~l~~n~~ 150 (872)
|.|++..+..+..+. |+.|++.+|.+
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCc
Confidence 988766555555444 55555555543
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.09 E-value=1.9e-08 Score=110.58 Aligned_cols=131 Identities=16% Similarity=0.193 Sum_probs=58.5
Q ss_pred CCccccCCCCCCEEEcccccCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCC
Q 002875 226 IPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG 305 (872)
Q Consensus 226 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~ 305 (872)
...+|.++.+|+.+.+..+... .....|.++++|+.+.+. +.+.......|.++.+|+.+++..+ +
T Consensus 257 ~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v----------- 322 (394)
T 4gt6_A 257 ETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-I----------- 322 (394)
T ss_dssp CTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-C-----------
T ss_pred ccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-c-----------
Confidence 3445555555665555433221 233345555555555553 2333333344555555555555432 1
Q ss_pred CceeEEEcCCCcCCCCCCCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcCCCCCCchhhhhcccccccc
Q 002875 306 GVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNV 385 (872)
Q Consensus 306 ~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 385 (872)
+..-..+|.+|++|+.+.+..+ ++.+-...|.++++|+.+++.++.... ..+....+|+.+.+
T Consensus 323 -------------~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i 385 (394)
T 4gt6_A 323 -------------TQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPV 385 (394)
T ss_dssp -------------CEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----
T ss_pred -------------cEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEe
Confidence 1122234555666666666433 443444556666666666665543221 12333344555554
Q ss_pred cC
Q 002875 386 SN 387 (872)
Q Consensus 386 s~ 387 (872)
..
T Consensus 386 ~~ 387 (394)
T 4gt6_A 386 AP 387 (394)
T ss_dssp --
T ss_pred CC
Confidence 43
No 407
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.05 E-value=1.6e-08 Score=111.16 Aligned_cols=310 Identities=11% Similarity=0.102 Sum_probs=201.7
Q ss_pred CCcEEECCCCCCcccCCccccCCCCCCEEECcCCc---CcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEE
Q 002875 19 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN---FSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 95 (872)
Q Consensus 19 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~---i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L 95 (872)
.|+.+.+..+ ++.+...+|.++++|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++.+...+|..+.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 4888888754 777888889999999999887764 66666778888888888877654 555666678888899998
Q ss_pred EccCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCc
Q 002875 96 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 175 (872)
Q Consensus 96 ~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~ 175 (872)
.+..+ +..+....|....+|+.+.+..+ ++.+....|.. ..|+.+.+..+.. ..-...+.+...+...........
T Consensus 143 ~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~ 218 (394)
T 4gt6_A 143 TIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESYP 218 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSSC
T ss_pred cccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCccc-ccccchhhhccccceecccccccc
Confidence 88654 44466677888888988888755 44455555654 5677777765422 122334555666666655443322
Q ss_pred ccCCc-------------cCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcc
Q 002875 176 GSIPK-------------ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLM 242 (872)
Q Consensus 176 ~~~p~-------------~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 242 (872)
...-. .+.....+..+.+. +.+..+-..+|..+..|+.+.+.++.. ......|.++.+|+.+.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~ 296 (394)
T 4gt6_A 219 AIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS 296 (394)
T ss_dssp BSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC
T ss_pred cccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccc-eecCcccccccccccccCC
Confidence 11000 01112234444443 334445566788999999999976654 3566789999999999996
Q ss_pred cccCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCCCeeeecCCCCCCCCCceeEEEcCCCcCCCCC
Q 002875 243 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSL 322 (872)
Q Consensus 243 ~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~l~~l~l~~n~~~~~~ 322 (872)
+.+.......|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +. . .-
T Consensus 297 -~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~-----------------------I~ 349 (394)
T 4gt6_A 297 -SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-K-----------------------IP 349 (394)
T ss_dssp -TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-B-----------------------CC
T ss_pred -CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-E-----------------------Eh
Confidence 4455555678899999999999754 55455667888888888877543 21 1 22
Q ss_pred CCCCCCCCCCcEEEcCCCccccccCccCCCCCCCcEEEcCCCcC
Q 002875 323 SPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGF 366 (872)
Q Consensus 323 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 366 (872)
..+|.+|++|+.+++.++.... ..|....+|+.+.+..|.+
T Consensus 350 ~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 350 ESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp GGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred HhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 3467889999999998876542 3566677788887776654
No 408
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.00 E-value=9.3e-10 Score=119.52 Aligned_cols=140 Identities=14% Similarity=0.206 Sum_probs=106.7
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEee--ccc--hhHHHHHHHHHHhhccC--CCCceeEEEEEecC---CeeEEEE
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIE--WGA--TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNR---HQAYLLY 682 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~--~~~--~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~ 682 (872)
..+.++.|.++.||+....+ ..+++|+.. .+. .....+.+|+.+++.++ +..+.++++++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 45668899999999988754 578888876 432 22456778899998887 45678899998876 4589999
Q ss_pred cccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCC-----------------------------------------
Q 002875 683 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC----------------------------------------- 721 (872)
Q Consensus 683 ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~----------------------------------------- 721 (872)
||++|..+.+......+..++..++.+++++|+.||+..
T Consensus 121 e~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (359)
T 3dxp_A 121 EFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSL 200 (359)
T ss_dssp ECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred EecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHH
Confidence 999998886544345577888899999999999999731
Q ss_pred --------------CCCcccCCCCCCCeeeCCCCC--eeEccccccc
Q 002875 722 --------------YPAIPHGDLKASNIVFDENME--PHLAEFGFKY 752 (872)
Q Consensus 722 --------------~~~i~Hrdlk~~Nill~~~~~--~ki~dfg~~~ 752 (872)
.+.++|+|+++.||+++.++. +.|.||+.+.
T Consensus 201 ~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~ 247 (359)
T 3dxp_A 201 MDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST 247 (359)
T ss_dssp HHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred HHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence 247999999999999997753 6899999875
No 409
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.75 E-value=5.9e-09 Score=110.21 Aligned_cols=186 Identities=13% Similarity=0.074 Sum_probs=120.6
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccC-CCC--ceeEEEEEecCC---eeEEEEccc
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKN--LIRLLGFCYNRH---QAYLLYDYL 685 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~ey~ 685 (872)
..+.++.|....||+.. ..+++|+-... .....+.+|.+.++.+. +.. +.+.++++...+ ..|+||||+
T Consensus 24 ~i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 24 TIEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eeEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 34557889999999864 56889986432 33566788999998874 332 335555544333 458999999
Q ss_pred CCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhC---------------------------------------------
Q 002875 686 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHD--------------------------------------------- 720 (872)
Q Consensus 686 ~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~--------------------------------------------- 720 (872)
+|.++.+......+..++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (304)
T 3sg8_A 99 KGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYR 178 (304)
T ss_dssp CCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred CCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence 99888765555567777888888888888888861
Q ss_pred ----------CCCCcccCCCCCCCeeeCC--CCCeeEccccccccccccC--CCCcccccccCch---hhhcc-c-----
Q 002875 721 ----------CYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQLAD--GSFPAKIAWTESG---EFYNA-M----- 777 (872)
Q Consensus 721 ----------~~~~i~Hrdlk~~Nill~~--~~~~ki~dfg~~~~~~~~~--~~~~~~~~~~~~~---e~~~~-~----- 777 (872)
..+.++|+|++|.||++++ ...+.|.||+.+..-.... .........+.++ .+... .
T Consensus 179 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~ 258 (304)
T 3sg8_A 179 DILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIP 258 (304)
T ss_dssp HHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHH
T ss_pred HHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcH
Confidence 1145899999999999997 4568899999875421100 0000000000000 01110 0
Q ss_pred ----CCcccccchhHHHHHHHHHcCCCCC
Q 002875 778 ----KEEMYMDVYGFGEIILEILTNGRLT 802 (872)
Q Consensus 778 ----~~~~~~Dv~S~Gvil~el~tg~~p~ 802 (872)
......+.|++|+++|++.+|..++
T Consensus 259 ~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 259 TVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1122258999999999999987654
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.74 E-value=1.5e-06 Score=94.79 Aligned_cols=253 Identities=9% Similarity=0.031 Sum_probs=128.2
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEc
Q 002875 18 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 97 (872)
Q Consensus 18 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L 97 (872)
..|+.+.+.. .++.+...+|.++.+|+.++|..+ ++.+...+|.++ .|+.+.+..+ +..+...+|... +|+.+.+
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccC
Confidence 4577777754 466666777888888888887643 666666777776 5666665433 444444556543 6777777
Q ss_pred cCCcccccCCcccCCCCCCcEeeCccCcCCccCCccCCCCCCCCEEEccCccCcccCCccccCCCCCcEEEeecCCCccc
Q 002875 98 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 177 (872)
Q Consensus 98 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~ 177 (872)
..+ +..+...+|.+. +|+...+..+ ++......+.....++...+..+.......... .... ...
T Consensus 121 p~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~---~~~ 185 (379)
T 4h09_A 121 PGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV---------LYNK---NKT 185 (379)
T ss_dssp CTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTE---------EEET---TSS
T ss_pred CCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccce---------eccc---ccc
Confidence 654 333344455443 4555544432 334444455555666655554332110000000 0000 001
Q ss_pred CCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccccCCCCCCccccCC
Q 002875 178 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 257 (872)
Q Consensus 178 ~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 257 (872)
....+.....+..+.+.... .......+.....|+.+.+..+ +.......|..+.+|+.+.+..+ ++..-...+..+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~ 262 (379)
T 4h09_A 186 ILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNC 262 (379)
T ss_dssp EEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTC
T ss_pred eeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcccccee
Confidence 11122223334444433221 2233344555566666666543 33344455666666666666544 333334455666
Q ss_pred CCcceeecccccccccCCccCCCCCCCcEEecCCCee
Q 002875 258 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNF 294 (872)
Q Consensus 258 ~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~n~l 294 (872)
.+|+.+.+..+ +.......|..+.+|+.+.+.++.+
T Consensus 263 ~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i 298 (379)
T 4h09_A 263 TALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAI 298 (379)
T ss_dssp TTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTC
T ss_pred ehhcccccccc-ceecccccccccccccccccccccc
Confidence 66666666433 3333444566666666666655544
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.61 E-value=9.3e-09 Score=110.42 Aligned_cols=63 Identities=21% Similarity=0.353 Sum_probs=31.2
Q ss_pred CCCCCEEEccCCCCcccCCccc---ccCCCCCEEeCcCCCCcCc----CCccccCCCCCCEEEcccccCC
Q 002875 185 LTKLESLFLFRNQLAGQVPWEF---SRVTTLKSLDLSDNRLSGP----IPESFADLKNLRLLSLMYNEMS 247 (872)
Q Consensus 185 l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~n~l~ 247 (872)
+++|++|+|.+|.+.+..+..+ ..+++|++|+|+.|.+... ++..+..+++|+.|++++|.++
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 4555555555555543211111 1345566666666665542 1222234566666666666554
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.60 E-value=5.3e-06 Score=90.44 Aligned_cols=263 Identities=10% Similarity=0.015 Sum_probs=156.4
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEE
Q 002875 17 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 96 (872)
Q Consensus 17 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~ 96 (872)
...|+.++|..+ ++.+...+|.+. +|+.+.+..+ +..+...+|... +|+.+++..+ +..+....|.+. +|+...
T Consensus 68 C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~ 141 (379)
T 4h09_A 68 CYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEFPGA-TTEIGNYIFYNS-SVKRIV 141 (379)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEE
T ss_pred CCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccCCCc-cccccccccccc-eeeeee
Confidence 468999999755 777888899887 7888887644 666667788775 7999999765 443455566654 677776
Q ss_pred ccCCcccccCCcccCCCCCCcEeeCccCcCCcc------------CCccCCCCCCCCEEEccCccCcccCCccccCCCCC
Q 002875 97 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ------------IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV 164 (872)
Q Consensus 97 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~------------~p~~l~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L 164 (872)
+..+ +..+....|....+++...+..+..... ....+.....+....+.... .......+....++
T Consensus 142 ~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l 219 (379)
T 4h09_A 142 IPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNL 219 (379)
T ss_dssp ECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSC
T ss_pred ccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eEEeeccccccccc
Confidence 6543 5556677888889998888765543211 11122233333333332221 11122233445556
Q ss_pred cEEEeecCCCcccCCccCcCCCCCCEEEccCCCCcccCCcccccCCCCCEEeCcCCCCcCcCCccccCCCCCCEEEcccc
Q 002875 165 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 244 (872)
Q Consensus 165 ~~L~ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 244 (872)
+.+.+..+ +.......+.....|+.+.+..+ ++.+-...|..+.+|+.+.+..+ +.......|.++.+|+.+.+..+
T Consensus 220 ~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~ 296 (379)
T 4h09_A 220 KKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNS 296 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCT
T ss_pred ceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccccc
Confidence 66555433 33333445556666666666544 44444556666666776666543 44344456666677777776666
Q ss_pred cCCCCCCccccCCCCcceeecccccccccCCccCCCCCCCcEEecCC
Q 002875 245 EMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 291 (872)
Q Consensus 245 ~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ls~ 291 (872)
.+...-...|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..
T Consensus 297 ~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 297 AIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 665455556666666776666533 4434445566666666665543
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.59 E-value=1.1e-08 Score=109.74 Aligned_cols=84 Identities=15% Similarity=0.248 Sum_probs=56.6
Q ss_pred CCCCCcEEEeecCCCcccCCccC---cCCCCCCEEEccCCCCccc----CCcccccCCCCCEEeCcCCCCcCcCCccccC
Q 002875 160 NMSEVQYLDIAGANLSGSIPKEL---SNLTKLESLFLFRNQLAGQ----VPWEFSRVTTLKSLDLSDNRLSGPIPESFAD 232 (872)
Q Consensus 160 ~l~~L~~L~ls~n~l~~~~p~~l---~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 232 (872)
.+++|++|++++|.+....+..+ ..+++|++|+|+.|.+.+. ++..+..+++|+.|++++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 46788888888888764333222 2477899999999988753 2223356788999999999877543333332
Q ss_pred -CCCCCEEEccccc
Q 002875 233 -LKNLRLLSLMYNE 245 (872)
Q Consensus 233 -l~~L~~L~L~~n~ 245 (872)
+ ...++++.++
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 3567888776
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.44 E-value=4.7e-07 Score=96.23 Aligned_cols=134 Identities=14% Similarity=0.091 Sum_probs=100.1
Q ss_pred chhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCC---C-CceeEEEEEecCCeeEEEEcccC
Q 002875 611 TECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRH---K-NLIRLLGFCYNRHQAYLLYDYLP 686 (872)
Q Consensus 611 ~~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H---~-niv~l~~~~~~~~~~~lv~ey~~ 686 (872)
...+.++.|....||+. |..+++|+.... .....+..|.+.++.+.+ + .+.+++++ +..++||||++
T Consensus 40 ~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~-~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~ 110 (320)
T 3r70_A 40 NELRYLSSGDDSDTFLC----NEQYVVKVPKRD-SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIK 110 (320)
T ss_dssp SCEEEEEECSSEEEEEE----TTTEEEEEESSH-HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCC
T ss_pred EEEEeCCCCCCceEEEE----CCEEEEEeCCcH-HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecC
Confidence 35667889999999987 778899976432 224457888888888866 1 23445554 56789999999
Q ss_pred CCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCC--------------------------------------------
Q 002875 687 NGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCY-------------------------------------------- 722 (872)
Q Consensus 687 ~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~-------------------------------------------- 722 (872)
|.++.+......+..++..++.++++.++.||+...
T Consensus 111 G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
T 3r70_A 111 GERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIE 190 (320)
T ss_dssp CBCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred CccccccccccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHH
Confidence 999875554455666777888888888888885322
Q ss_pred ----------------CCcccCCCCCCCeeeCCCCCeeEcccccccc
Q 002875 723 ----------------PAIPHGDLKASNIVFDENMEPHLAEFGFKYL 753 (872)
Q Consensus 723 ----------------~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~ 753 (872)
+.++|+|++|.||+++.+..+.|.||+.+..
T Consensus 191 ~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 191 TIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999866679999998753
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.29 E-value=1.2e-07 Score=96.42 Aligned_cols=80 Identities=24% Similarity=0.367 Sum_probs=43.8
Q ss_pred cCCCCCcEEECcCCcCcc--ccCccccCCCCCCEEEccCCcccccCCcccCCCC--CCcEeeCccCcCCccCCc------
Q 002875 63 QSLRNLLVLDAFSNSFSG--SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFK--SLEFLHLAGNLLNDQIPA------ 132 (872)
Q Consensus 63 ~~l~~L~~LdL~~n~l~~--~~p~~~~~L~~L~~L~L~~n~~~~~~p~~~~~l~--~L~~L~L~~n~l~~~~p~------ 132 (872)
.++++|+.|+|++|.+++ .+|..+..+++|++|+|++|.+.+. ..+..++ +|++|+|++|.+.+..|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 345566666666666654 2234455566666666666666543 2233333 666666666666554431
Q ss_pred -cCCCCCCCCEEE
Q 002875 133 -ELGMLKTVTHME 144 (872)
Q Consensus 133 -~l~~L~~L~~L~ 144 (872)
.+..+++|+.|+
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 244556666554
No 416
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.28 E-value=2.9e-06 Score=89.27 Aligned_cols=137 Identities=13% Similarity=0.061 Sum_probs=95.9
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCC---CceeEEEEEe-cCCeeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHK---NLIRLLGFCY-NRHQAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~ey~~~ 687 (872)
..+.++.|....||+. |..++||+-. .......+..|.+.|+.+.+. .|.+.+.++. ..+..++||||++|
T Consensus 23 ~v~~l~~G~~n~v~~v----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 23 SVESLGEGFRNYAILV----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp CEEEEEECSSEEEEEE----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeeecCCCcceeEEEE----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 3455677888889987 6788899853 223356788899999988753 2456677764 45668899999999
Q ss_pred CChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhC-----------------------------------------------
Q 002875 688 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHD----------------------------------------------- 720 (872)
Q Consensus 688 g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~----------------------------------------------- 720 (872)
..+.+......+..++..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 177 (306)
T 3tdw_A 98 QILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQ 177 (306)
T ss_dssp EECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHH
T ss_pred eECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHH
Confidence 888764433344455555566666666555542
Q ss_pred ----------CCCCcccCCCCCCCeeeCC---CCC-eeEcccccccc
Q 002875 721 ----------CYPAIPHGDLKASNIVFDE---NME-PHLAEFGFKYL 753 (872)
Q Consensus 721 ----------~~~~i~Hrdlk~~Nill~~---~~~-~ki~dfg~~~~ 753 (872)
..+.++|+|++|.||+++. ++. +.|.||+.+..
T Consensus 178 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 178 SYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235699999999999987 355 58999997643
No 417
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.27 E-value=1.6e-06 Score=90.09 Aligned_cols=75 Identities=11% Similarity=0.071 Sum_probs=60.3
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccc-hhHHHHHHHHHHhhccCCC---CceeEEEEEecCCeeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHK---NLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
..+.++.|.++.||++...+|+.++||+..... .....+..|++.|+.++|. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 456789999999999999899999999965332 2246788999999999875 577888764 36899999999
Q ss_pred CCh
Q 002875 688 GNL 690 (872)
Q Consensus 688 g~L 690 (872)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.24 E-value=1.9e-07 Score=90.38 Aligned_cols=114 Identities=15% Similarity=0.149 Sum_probs=63.4
Q ss_pred cccCCCCCCEEECcCC-cCcc----cCCccccCCCCCcEEECcCCcCccc----cCccccCCCCCCEEEccCCccccc--
Q 002875 37 EIFNLTSLISLDISRN-NFSG----HFPGGIQSLRNLLVLDAFSNSFSGS----VPAEISQLEHLKVLNLAGSYFSGP-- 105 (872)
Q Consensus 37 ~~~~l~~L~~L~Ls~N-~i~~----~~~~~~~~l~~L~~LdL~~n~l~~~----~p~~~~~L~~L~~L~L~~n~~~~~-- 105 (872)
.+...+.|++|+|++| .|.. .+...+...++|++|||++|.+... +...+...++|++|+|++|.+...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3455666666666666 5542 1233455556666666666666532 122344445666677766666532
Q ss_pred --CCcccCCCCCCcEeeC--ccCcCCcc----CCccCCCCCCCCEEEccCccC
Q 002875 106 --IPSQFGSFKSLEFLHL--AGNLLNDQ----IPAELGMLKTVTHMEIGYNFY 150 (872)
Q Consensus 106 --~p~~~~~l~~L~~L~L--~~n~l~~~----~p~~l~~L~~L~~L~l~~n~~ 150 (872)
+...+...++|++|+| ++|.+... +...+...++|++|++++|.+
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2345555666777777 66666443 222334446677777766654
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.13 E-value=3.7e-07 Score=88.24 Aligned_cols=87 Identities=15% Similarity=0.072 Sum_probs=35.9
Q ss_pred CCCCCCEEECcCCcCcc----cCCccccCCCCCcEEECcCCcCccc----cCccccCCCCCCEEEc--cCCccccc----
Q 002875 40 NLTSLISLDISRNNFSG----HFPGGIQSLRNLLVLDAFSNSFSGS----VPAEISQLEHLKVLNL--AGSYFSGP---- 105 (872)
Q Consensus 40 ~l~~L~~L~Ls~N~i~~----~~~~~~~~l~~L~~LdL~~n~l~~~----~p~~~~~L~~L~~L~L--~~n~~~~~---- 105 (872)
..++|++|+|++|.|.. .+...+...+.|++|||++|.+... +...+...++|++|+| ++|.+...
T Consensus 63 ~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~ 142 (185)
T 1io0_A 63 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEME 142 (185)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH
T ss_pred hCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHH
Confidence 34445555555554432 1122233334455555555544421 1223334444555555 44444321
Q ss_pred CCcccCCCCCCcEeeCccCcC
Q 002875 106 IPSQFGSFKSLEFLHLAGNLL 126 (872)
Q Consensus 106 ~p~~~~~l~~L~~L~L~~n~l 126 (872)
+...+...++|++|+|++|.+
T Consensus 143 l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 143 IANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHhCCCcCEEeccCCCC
Confidence 112233334455555554443
No 420
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.13 E-value=1.6e-06 Score=87.97 Aligned_cols=97 Identities=22% Similarity=0.274 Sum_probs=71.7
Q ss_pred EECCCCCCc---ccCCccccCCCCCCEEECcCCcCcc--cCCccccCCCCCcEEECcCCcCccccCccccCCC--CCCEE
Q 002875 23 LNLSHNSFS---GQFPVEIFNLTSLISLDISRNNFSG--HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE--HLKVL 95 (872)
Q Consensus 23 L~L~~n~i~---~~~~~~~~~l~~L~~L~Ls~N~i~~--~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~--~L~~L 95 (872)
++++.|... ...+....++++|++|+|++|+|.+ .+|+.+..+++|+.|||++|.+.+. ..+..+. +|++|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 667777433 2222233568899999999999987 4456778899999999999999864 3344444 89999
Q ss_pred EccCCcccccCCc-------ccCCCCCCcEeeC
Q 002875 96 NLAGSYFSGPIPS-------QFGSFKSLEFLHL 121 (872)
Q Consensus 96 ~L~~n~~~~~~p~-------~~~~l~~L~~L~L 121 (872)
+|++|.+.+..|+ .+..+++|+.||=
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LDg 258 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLDG 258 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEESS
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeECC
Confidence 9999999876653 3678899998873
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.09 E-value=1.3e-05 Score=82.82 Aligned_cols=134 Identities=19% Similarity=0.116 Sum_probs=93.0
Q ss_pred hccCCCCC-ceeeeecC-CCcEEEEEEeeccchhHHHHHHHHHHhhccC-CCCceeEEEEEecCCeeEEEEcccCCCChH
Q 002875 615 EAARPQSA-AGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 691 (872)
Q Consensus 615 ~~g~g~~~-~v~~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~g~L~ 691 (872)
.+..|..+ .||+.... +|..+.||+-..+ ....+.+|...|+.+. +--|-++++++.+.+..++||||++|.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 34556666 58987654 4567899986533 3456778888887774 223557888999889999999999998877
Q ss_pred HHhhCCCCHHHHHHHHHHHHHHHHHHhhCC--------------------------------------------------
Q 002875 692 EKIRTKRDWAAKYKIVLGVARGLCFLHHDC-------------------------------------------------- 721 (872)
Q Consensus 692 ~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~-------------------------------------------------- 721 (872)
+..... ...+..++.++++.++-||+..
T Consensus 109 ~~~~~~--~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (272)
T 4gkh_A 109 QVLEEY--PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKL 186 (272)
T ss_dssp HHHHHC--GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTT
T ss_pred ccccCC--HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhc
Confidence 654321 1223345555555555555321
Q ss_pred -----CCCcccCCCCCCCeeeCCCCCeeEccccccc
Q 002875 722 -----YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 752 (872)
Q Consensus 722 -----~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~ 752 (872)
.+.++|+|+.+.||+++.++.+-|.||+.+.
T Consensus 187 ~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 187 LPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1247899999999999987777899999764
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.94 E-value=1.3e-05 Score=86.25 Aligned_cols=74 Identities=5% Similarity=-0.086 Sum_probs=54.5
Q ss_pred hhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCC--ceeEEEEEecC-CeeEEEEcccCCCC
Q 002875 613 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN--LIRLLGFCYNR-HQAYLLYDYLPNGN 689 (872)
Q Consensus 613 ~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~ey~~~g~ 689 (872)
.+.++.|....+|+... +|..+++|.-... ..+..|...++.+.... +.++++++... +..|+||||++|..
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 45577888999998875 5889999987533 24777888888776433 45677777764 67899999999865
Q ss_pred hH
Q 002875 690 LS 691 (872)
Q Consensus 690 L~ 691 (872)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.89 E-value=9.9e-06 Score=87.46 Aligned_cols=79 Identities=9% Similarity=-0.034 Sum_probs=55.2
Q ss_pred hhhc-cCCCCCceeeeecC-------CCcEEEEEEeeccc---h-hHHHHHHHHHHhhccCC---CCceeEEEEEecC--
Q 002875 613 CEEA-ARPQSAAGCKAVLP-------TGITVSVKKIEWGA---T-RIKIVSEFITRIGTVRH---KNLIRLLGFCYNR-- 675 (872)
Q Consensus 613 ~~~~-g~g~~~~v~~~~~~-------~g~~vavK~~~~~~---~-~~~~~~~e~~~l~~l~H---~niv~l~~~~~~~-- 675 (872)
.+.+ +.|....+|+.... +|..+++|.-.... . ....+.+|+..++.+.. -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3456 77888899988764 36789999865432 1 12456778888877743 2466788888665
Q ss_pred -CeeEEEEcccCCCChH
Q 002875 676 -HQAYLLYDYLPNGNLS 691 (872)
Q Consensus 676 -~~~~lv~ey~~~g~L~ 691 (872)
+..|+||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 4578999999986654
No 424
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.66 E-value=0.00018 Score=75.27 Aligned_cols=134 Identities=16% Similarity=0.133 Sum_probs=90.8
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccC---CCCceeEEEEEecCCeeEEEEcccCCC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPNG 688 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ey~~~g 688 (872)
..+.++.|....+|+... ++..++||.-... ....+..|.+.|+.+. ...+.+.++++...+..++||||+++.
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 445678899999999876 4678889987533 3566788888888774 356778899988888899999999987
Q ss_pred ChHH-----------HhhC--C----------------------CCHHHHH---HHHH----------------HHHHHH
Q 002875 689 NLSE-----------KIRT--K----------------------RDWAAKY---KIVL----------------GVARGL 714 (872)
Q Consensus 689 ~L~~-----------~l~~--~----------------------~~~~~~~---~i~~----------------~i~~gl 714 (872)
.+.. .++. . .+|.+.. ++.. .+.+.+
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1111 0 1454321 1111 111111
Q ss_pred -HHHhh-CCCCCcccCCCCCCCeeeCCCCCeeEcccc
Q 002875 715 -CFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFG 749 (872)
Q Consensus 715 -~~lH~-~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg 749 (872)
+.|.. ...|.++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 2356899999999999999887 8899975
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.62 E-value=8e-05 Score=81.57 Aligned_cols=75 Identities=12% Similarity=0.002 Sum_probs=49.0
Q ss_pred hhhhccCCCCCceeeeecC-CCcEEEEEEeeccc--------hhHHHHHHHHHHhhccCC--CCce-eEEEEEecCCeeE
Q 002875 612 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--------TRIKIVSEFITRIGTVRH--KNLI-RLLGFCYNRHQAY 679 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~-~g~~vavK~~~~~~--------~~~~~~~~e~~~l~~l~H--~niv-~l~~~~~~~~~~~ 679 (872)
..+.+|.|.++.||++... +|+.|+||...... ...+.+..|.+.++.+.. |..| +++.+ +.+..+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~ 111 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV 111 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence 3567899999999999864 57889999864321 123345667888876642 3444 55544 344568
Q ss_pred EEEcccCCC
Q 002875 680 LLYDYLPNG 688 (872)
Q Consensus 680 lv~ey~~~g 688 (872)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999864
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.61 E-value=1.5e-05 Score=74.71 Aligned_cols=85 Identities=11% Similarity=0.111 Sum_probs=44.1
Q ss_pred CCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCc-CccccCccccCC----CCCCEEEccCCc-ccccCCcccCCCC
Q 002875 41 LTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQL----EHLKVLNLAGSY-FSGPIPSQFGSFK 114 (872)
Q Consensus 41 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~-l~~~~p~~~~~L----~~L~~L~L~~n~-~~~~~p~~~~~l~ 114 (872)
-.+|++||++++.|+..--..+..+++|+.|+|++|. ++...-..+..+ ++|++|+|++|. ++..--..+.+++
T Consensus 60 ~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 60 KYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred CceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 3456666666666554333445566666666666663 443222334433 246666666653 4322222345556
Q ss_pred CCcEeeCccCc
Q 002875 115 SLEFLHLAGNL 125 (872)
Q Consensus 115 ~L~~L~L~~n~ 125 (872)
+|++|+++++.
T Consensus 140 ~L~~L~L~~c~ 150 (176)
T 3e4g_A 140 NLKYLFLSDLP 150 (176)
T ss_dssp TCCEEEEESCT
T ss_pred CCCEEECCCCC
Confidence 66666666553
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.56 E-value=2.4e-05 Score=73.38 Aligned_cols=93 Identities=13% Similarity=0.164 Sum_probs=70.3
Q ss_pred cCCcchhhhcCCCCcEEECCCCCCcccCCccccCCCCCCEEECcCCc-CcccCCccccCC----CCCcEEECcCCc-Ccc
Q 002875 7 ALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN-FSGHFPGGIQSL----RNLLVLDAFSNS-FSG 80 (872)
Q Consensus 7 ~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~-i~~~~~~~~~~l----~~L~~LdL~~n~-l~~ 80 (872)
.+|..... -..|+.|||+++.|+..--..+..+++|++|+|++|. |+..--..+..+ ++|++|||++|. ++.
T Consensus 52 ~LP~~~~~--~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD 129 (176)
T 3e4g_A 52 HLPTGPLD--KYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTD 129 (176)
T ss_dssp GSCCCSTT--CCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCH
T ss_pred cCCcccCC--CceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCH
Confidence 45554322 2369999999999987666678899999999999995 654322334544 369999999985 775
Q ss_pred ccCccccCCCCCCEEEccCCc
Q 002875 81 SVPAEISQLEHLKVLNLAGSY 101 (872)
Q Consensus 81 ~~p~~~~~L~~L~~L~L~~n~ 101 (872)
.--..+.++++|++|+|+++.
T Consensus 130 ~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 130 KGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHHHHGGGCTTCCEEEEESCT
T ss_pred HHHHHHhcCCCCCEEECCCCC
Confidence 555567889999999999985
No 428
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.50 E-value=0.00026 Score=75.64 Aligned_cols=135 Identities=17% Similarity=0.201 Sum_probs=77.3
Q ss_pred hhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccC-----CCCceeEE-E--EEecCCeeEEEEccc
Q 002875 614 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----HKNLIRLL-G--FCYNRHQAYLLYDYL 685 (872)
Q Consensus 614 ~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~-~--~~~~~~~~~lv~ey~ 685 (872)
+.++.|..+.||+....+| .+++|+..... +....|...++.+. .|.++... | +....+..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 3455567889999887655 48999987532 22333444444332 34444311 1 112356789999999
Q ss_pred CCCChH-----H---------HhhC---C-------------CCHHHHH-------------------------------
Q 002875 686 PNGNLS-----E---------KIRT---K-------------RDWAAKY------------------------------- 704 (872)
Q Consensus 686 ~~g~L~-----~---------~l~~---~-------------~~~~~~~------------------------------- 704 (872)
+|..+. + .++. . ..|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 0 1111 0 1332210
Q ss_pred HHHHHHHHHHHHHhh----------CCCCCcccCCCCCCCeeeCCCCCeeEccccccc
Q 002875 705 KIVLGVARGLCFLHH----------DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 752 (872)
Q Consensus 705 ~i~~~i~~gl~~lH~----------~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~ 752 (872)
.+..++.+++++++. ...+.++|+|+++.||+++.++.+.|.||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123445666653 123489999999999999878889999999763
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.24 E-value=0.00072 Score=74.45 Aligned_cols=73 Identities=14% Similarity=0.058 Sum_probs=45.1
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeec-------c-c--hhHHHHHHHHHHhh-ccCCCCceeEEEEEecCCeeEE
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEW-------G-A--TRIKIVSEFITRIG-TVRHKNLIRLLGFCYNRHQAYL 680 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~-------~-~--~~~~~~~~e~~~l~-~l~H~niv~l~~~~~~~~~~~l 680 (872)
..+.+|.|..+.||+... +++.++||.... . . .....+..|+..+. ...+..+.+++++. ++..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 355688899999999865 567899994321 1 1 02223333333222 22234566777665 466799
Q ss_pred EEccc-CC
Q 002875 681 LYDYL-PN 687 (872)
Q Consensus 681 v~ey~-~~ 687 (872)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.18 E-value=0.00047 Score=71.59 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=54.0
Q ss_pred hhhhccCCCCCceeeeecCCCcEEEEEEeeccch-hHHHHHHHHHHhhccCC---CCceeEEEEEecCCeeEEEEcccCC
Q 002875 612 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRH---KNLIRLLGFCYNRHQAYLLYDYLPN 687 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~-~~~~~~~e~~~l~~l~H---~niv~l~~~~~~~~~~~lv~ey~~~ 687 (872)
..+.+|.|..+.||+.++.+|+.|.||+-..... ....+..|.+.|+.+.- --+.+.+++. ..++||||.++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 4567889999999999999999999998653322 24567888888877642 1234555542 34799999987
Q ss_pred CCh
Q 002875 688 GNL 690 (872)
Q Consensus 688 g~L 690 (872)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 431
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.86 E-value=0.0011 Score=70.10 Aligned_cols=74 Identities=5% Similarity=-0.116 Sum_probs=48.7
Q ss_pred hccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCC--ceeEEEE-----EecCCeeEEEEcccCC
Q 002875 615 EAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN--LIRLLGF-----CYNRHQAYLLYDYLPN 687 (872)
Q Consensus 615 ~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~-----~~~~~~~~lv~ey~~~ 687 (872)
.++ |....||+....+|+.+++|....+....+.+..|...++.+.... +.+++.. ....+..++||||++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 455 7778899988888888999998744334455666777776664222 3334432 1224566889999987
Q ss_pred CC
Q 002875 688 GN 689 (872)
Q Consensus 688 g~ 689 (872)
..
T Consensus 112 ~~ 113 (328)
T 1zyl_A 112 RQ 113 (328)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.86 E-value=0.0045 Score=65.64 Aligned_cols=135 Identities=13% Similarity=0.049 Sum_probs=69.4
Q ss_pred hhccCCCCCc-eeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCC--CCceeEEEEEecCCeeEEEEcccCCCCh
Q 002875 614 EEAARPQSAA-GCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRH--KNLIRLLGFCYNRHQAYLLYDYLPNGNL 690 (872)
Q Consensus 614 ~~~g~g~~~~-v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv~ey~~~g~L 690 (872)
+.++.|+... +|+....+|..+++|...... .+.+..|+..++.+.. -.+.+++.+..+.+ ++|||++.+..+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l 99 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF 99 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence 3444454444 567665557778787654322 1233445565555532 23456666654443 789999977666
Q ss_pred HHHhhCC-------------------------C-CHHH--HH-------H-HH------------HHHHHHHHHHh---h
Q 002875 691 SEKIRTK-------------------------R-DWAA--KY-------K-IV------------LGVARGLCFLH---H 719 (872)
Q Consensus 691 ~~~l~~~-------------------------~-~~~~--~~-------~-i~------------~~i~~gl~~lH---~ 719 (872)
.+++... . .|.. .. . +. ..+.+.++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 5433210 0 0100 00 0 00 01111122221 1
Q ss_pred CCCCCcccCCCCCCCeeeCCC----CCeeEccccccc
Q 002875 720 DCYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKY 752 (872)
Q Consensus 720 ~~~~~i~Hrdlk~~Nill~~~----~~~ki~dfg~~~ 752 (872)
...+.++|+|+.+.||+++.+ ..+.|.||+.+.
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 123479999999999999874 678999999764
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.66 E-value=0.0013 Score=58.68 Aligned_cols=68 Identities=16% Similarity=0.128 Sum_probs=49.2
Q ss_pred cEEEccCccce-eccchhccCCCCCCEEECCCCccccccCccccCCCCCcEEECcCCeeeecCCCCccccc
Q 002875 453 ERIDLANNKLI-GSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 522 (872)
Q Consensus 453 ~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~ 522 (872)
..++.+++.++ ..+|..+ -++|+.|+|++|+|+.+.+..|..+++|++|+|++|++.....-.++..+
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~w 79 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAW 79 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHH
T ss_pred CEEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHH
Confidence 36777777776 2344322 13588999999999988888899999999999999988765554344343
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.54 E-value=0.00068 Score=64.78 Aligned_cols=111 Identities=14% Similarity=0.135 Sum_probs=58.8
Q ss_pred cCCCCCCEEECcCC-cCcc----cCCccccCCCCCcEEECcCCcCccccC----ccccCCCCCCEEEccCCccccc----
Q 002875 39 FNLTSLISLDISRN-NFSG----HFPGGIQSLRNLLVLDAFSNSFSGSVP----AEISQLEHLKVLNLAGSYFSGP---- 105 (872)
Q Consensus 39 ~~l~~L~~L~Ls~N-~i~~----~~~~~~~~l~~L~~LdL~~n~l~~~~p----~~~~~L~~L~~L~L~~n~~~~~---- 105 (872)
.+-+.|++|+|++| .|.. .+.+++..-+.|+.|+|++|.+....- ..+..=+.|++|+|++|.|...
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34556666666664 5431 223345556667777777666653221 2233345677777777766432
Q ss_pred CCcccCCCCCCcEeeCccCc---CCcc----CCccCCCCCCCCEEEccCcc
Q 002875 106 IPSQFGSFKSLEFLHLAGNL---LNDQ----IPAELGMLKTVTHMEIGYNF 149 (872)
Q Consensus 106 ~p~~~~~l~~L~~L~L~~n~---l~~~----~p~~l~~L~~L~~L~l~~n~ 149 (872)
+-+++..-+.|++|+|++|. +... +...+..-+.|+.|++++|.
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 22345555567777776542 2211 22233444567777776654
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.47 E-value=0.0049 Score=54.93 Aligned_cols=55 Identities=16% Similarity=0.251 Sum_probs=31.6
Q ss_pred EEECCCCCCc-ccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCCcC
Q 002875 22 DLNLSHNSFS-GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 78 (872)
Q Consensus 22 ~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n~l 78 (872)
+++-+++.++ ..+|..+. ++|++|+|++|+|+.+.++.|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5666666664 13343332 3466666666666655555566666666666666654
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.38 E-value=0.0075 Score=64.64 Aligned_cols=136 Identities=13% Similarity=0.131 Sum_probs=79.0
Q ss_pred hhhccCCCCCceeeeecC--------CCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCc-eeEEEEEecCCeeEEEEc
Q 002875 613 CEEAARPQSAAGCKAVLP--------TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 613 ~~~~g~g~~~~v~~~~~~--------~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e 683 (872)
.+.+..|....+|+...+ +++.|.+|+-.........+.+|.++++.+.-..+ .++++++.+ .+|||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 344566778888998865 35789999864322234556678888877653333 456766643 29999
Q ss_pred ccCCCChHHH-----------------hhC-------CCC--HHHHHHHHHHHHH-------------------HHHHHh
Q 002875 684 YLPNGNLSEK-----------------IRT-------KRD--WAAKYKIVLGVAR-------------------GLCFLH 718 (872)
Q Consensus 684 y~~~g~L~~~-----------------l~~-------~~~--~~~~~~i~~~i~~-------------------gl~~lH 718 (872)
|++|..+... ++. ... |.+..++..++.. .++++.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998554310 111 112 3333344433321 223332
Q ss_pred ----hC-CCCCcccCCCCCCCeeeCCC----CCeeEccccccc
Q 002875 719 ----HD-CYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKY 752 (872)
Q Consensus 719 ----~~-~~~~i~Hrdlk~~Nill~~~----~~~ki~dfg~~~ 752 (872)
.. ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 21 22368999999999999876 689999998764
No 437
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.36 E-value=0.0024 Score=67.44 Aligned_cols=138 Identities=14% Similarity=0.101 Sum_probs=76.6
Q ss_pred hhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCC--ceeEEEE------EecCCeeEEEEcc
Q 002875 613 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN--LIRLLGF------CYNRHQAYLLYDY 684 (872)
Q Consensus 613 ~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~------~~~~~~~~lv~ey 684 (872)
.+.++.|....+|+....+| .+++|..... ...+.+..|+..++.+.... +.+++.. ....+..++||||
T Consensus 27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eeccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 34466777788999887666 6889988642 12234455666666554222 2222211 1123567899999
Q ss_pred cCCCChHH--------------HhhC-------C----C---CHHHHHH------------HHHHHHHHHHHHhhC----
Q 002875 685 LPNGNLSE--------------KIRT-------K----R---DWAAKYK------------IVLGVARGLCFLHHD---- 720 (872)
Q Consensus 685 ~~~g~L~~--------------~l~~-------~----~---~~~~~~~------------i~~~i~~gl~~lH~~---- 720 (872)
++|..+.. .++. . . .|..... +...+.+.+++++..
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 99855321 0111 0 0 1322110 011234445555532
Q ss_pred CCCCcccCCCCCCCeeeCCCCCeeEccccccc
Q 002875 721 CYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 752 (872)
Q Consensus 721 ~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~ 752 (872)
..++++|+|+.+.||+++.+..+.|.||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 12479999999999999877666899999763
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.33 E-value=0.0019 Score=67.35 Aligned_cols=71 Identities=7% Similarity=-0.029 Sum_probs=42.1
Q ss_pred hhhccCCCCCceeeeecCCCcEEEEEEeeccchhHHHHHHHHHHhhccCCCCce-eEEEEEecCCeeEEEEccc-CCCCh
Q 002875 613 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYDYL-PNGNL 690 (872)
Q Consensus 613 ~~~~g~g~~~~v~~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~niv-~l~~~~~~~~~~~lv~ey~-~~g~L 690 (872)
.+.++.|....+|+. ..+++|+-..+.........|...++.+....+. ++++++ ++.-++|+||+ ++-++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTM 95 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEEC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccC
Confidence 566778888999988 5688888754322111224566666655432333 455543 33457999999 55444
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.19 E-value=0.0014 Score=62.64 Aligned_cols=85 Identities=13% Similarity=0.153 Sum_probs=35.7
Q ss_pred cCCCCCcEEECcCC-cCccc----cCccccCCCCCCEEEccCCcccccC----CcccCCCCCCcEeeCccCcCCcc----
Q 002875 63 QSLRNLLVLDAFSN-SFSGS----VPAEISQLEHLKVLNLAGSYFSGPI----PSQFGSFKSLEFLHLAGNLLNDQ---- 129 (872)
Q Consensus 63 ~~l~~L~~LdL~~n-~l~~~----~p~~~~~L~~L~~L~L~~n~~~~~~----p~~~~~l~~L~~L~L~~n~l~~~---- 129 (872)
.+-+.|+.|+|++| .+... +-+++..-+.|+.|+|++|.+...- .+.+..-+.|++|+|++|.|...
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 33445555555543 43311 1122333445555555555553211 12222334555555555555321
Q ss_pred CCccCCCCCCCCEEEccC
Q 002875 130 IPAELGMLKTVTHMEIGY 147 (872)
Q Consensus 130 ~p~~l~~L~~L~~L~l~~ 147 (872)
+-..+..-+.|++|++++
T Consensus 118 la~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HHHHTTTTCCCSEEECCC
T ss_pred HHHHHhhCCceeEEECCC
Confidence 112233334455555543
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.07 E-value=0.0071 Score=66.37 Aligned_cols=73 Identities=14% Similarity=0.029 Sum_probs=47.8
Q ss_pred hhhccCCCCCceeeeecCC--------CcEEEEEEeeccchhHHHHHHHHHHhhccCCCCc-eeEEEEEecCCeeEEEEc
Q 002875 613 CEEAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 613 ~~~~g~g~~~~v~~~~~~~--------g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e 683 (872)
.+.++.|....+|+...++ +..|.+|+.... ...+.+..|..+++.+...++ .++++.+.+ .+|||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 4456778888999988653 578999987431 111344568888877754444 467776542 38999
Q ss_pred ccCCCCh
Q 002875 684 YLPNGNL 690 (872)
Q Consensus 684 y~~~g~L 690 (872)
|++|.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986343
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.89 E-value=0.0098 Score=64.02 Aligned_cols=74 Identities=9% Similarity=-0.021 Sum_probs=43.0
Q ss_pred hhhccCCCCCceeeeecCC---------CcEEEEEEeeccchhHHHHHHHHHHhhccCCCCc-eeEEEEEecCCeeEEEE
Q 002875 613 CEEAARPQSAAGCKAVLPT---------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLY 682 (872)
Q Consensus 613 ~~~~g~g~~~~v~~~~~~~---------g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ 682 (872)
...++.|....+|+....+ +..+++|+-..+.........|.+.++.+....+ .++++.. . -++||
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 3456677788899887654 2678888875432222123567777776653343 3666554 2 36899
Q ss_pred cccCCCCh
Q 002875 683 DYLPNGNL 690 (872)
Q Consensus 683 ey~~~g~L 690 (872)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.62 E-value=0.015 Score=64.11 Aligned_cols=74 Identities=8% Similarity=-0.079 Sum_probs=46.6
Q ss_pred hhhccCCCCCceeeeecCC-CcEEEEEEeeccchhHHHHHHHHHHhhccCCCCc-eeEEEEEecCCeeEEEEcccCCCCh
Q 002875 613 CEEAARPQSAAGCKAVLPT-GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYDYLPNGNL 690 (872)
Q Consensus 613 ~~~~g~g~~~~v~~~~~~~-g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ey~~~g~L 690 (872)
.+.++.|....+|+....+ +..+++|+...+....-....|..+++.+...++ .++++++. + .+||||++|-++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 4557778888999988765 5788899874332111112567788877765555 46777763 2 359999987443
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.15 E-value=0.067 Score=56.57 Aligned_cols=30 Identities=13% Similarity=0.244 Sum_probs=26.6
Q ss_pred CCcccCCCCCCCeeeCCCCCeeEccccccc
Q 002875 723 PAIPHGDLKASNIVFDENMEPHLAEFGFKY 752 (872)
Q Consensus 723 ~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~ 752 (872)
+.++|+|+.+.||+++.++.+.|.||+.+.
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~ 235 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM 235 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence 479999999999999987889999998654
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.71 E-value=0.12 Score=55.64 Aligned_cols=30 Identities=23% Similarity=0.349 Sum_probs=25.8
Q ss_pred CCcccCCCCCCCeeeCCC------CCeeEccccccc
Q 002875 723 PAIPHGDLKASNIVFDEN------MEPHLAEFGFKY 752 (872)
Q Consensus 723 ~~i~Hrdlk~~Nill~~~------~~~ki~dfg~~~ 752 (872)
..++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 368899999999999876 789999998764
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.43 E-value=0.16 Score=55.12 Aligned_cols=74 Identities=3% Similarity=-0.085 Sum_probs=45.6
Q ss_pred hhhccCCCCCceeeeecCC--------CcEEEEEEeeccchhHHHHHHHHHHhhccCCCCc-eeEEEEEecCCeeEEEEc
Q 002875 613 CEEAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYD 683 (872)
Q Consensus 613 ~~~~g~g~~~~v~~~~~~~--------g~~vavK~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e 683 (872)
.+.+..|....+|+...++ ++.|++|+-..+....-...+|.++++.+.-..+ .++++.+. -+.|||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 3445667788889887653 6789999865433222223466777766643333 35555432 378999
Q ss_pred ccCCCCh
Q 002875 684 YLPNGNL 690 (872)
Q Consensus 684 y~~~g~L 690 (872)
|++|..+
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998553
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=85.74 E-value=4.8 Score=38.57 Aligned_cols=100 Identities=16% Similarity=0.074 Sum_probs=58.9
Q ss_pred ChHHHhhC---CCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCCCCeeEccccccccccccCCCCcccc
Q 002875 689 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI 765 (872)
Q Consensus 689 ~L~~~l~~---~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~~~~ki~dfg~~~~~~~~~~~~~~~~ 765 (872)
||.+.|+. ..+..+.+.++.|.+++|.-+-....+ ..+=+-|..|++..+|.+...+ +.+. .. ..
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~---~~------~~ 101 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD---AG------EP 101 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---cc------cc
Confidence 67787754 568899999999999988665221011 1222336888999998887764 2110 00 01
Q ss_pred cccCchhhhcccCCcccccchhHHHHHHHHHcCCCCC
Q 002875 766 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLT 802 (872)
Q Consensus 766 ~~~~~~e~~~~~~~~~~~Dv~S~Gvil~el~tg~~p~ 802 (872)
. ..+|+... ...+.+.=|||+|+++|..+--+.|.
T Consensus 102 ~-~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 102 P-PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp ------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred C-CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 1 22333321 23345668999999999988755443
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=81.78 E-value=2.4 Score=40.52 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=64.5
Q ss_pred CCCCceeEEEEEecCCeeEEEEcccCCCChHHHhhCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCCeeeCCC
Q 002875 661 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 740 (872)
Q Consensus 661 ~H~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~~lH~~~~~~i~Hrdlk~~Nill~~~ 740 (872)
.||+.++. ..-.+.+.+.+.|+--+.+-=...++ ..+...+++++.+++...++++.. +|--+.|+|++++.+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik-~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~ 115 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK-SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRD 115 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG-GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTT
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH-hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCC
Confidence 68999976 56667777777777554322223333 457889999999999988777766 788899999999999
Q ss_pred CCeeEcccccc
Q 002875 741 MEPHLAEFGFK 751 (872)
Q Consensus 741 ~~~ki~dfg~~ 751 (872)
+.+++.=.|+.
T Consensus 116 ~~p~i~~RGik 126 (215)
T 4ann_A 116 GLPIAKTRGLQ 126 (215)
T ss_dssp SCEEESCCEET
T ss_pred CCEEEEEccCc
Confidence 99999988874
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=80.41 E-value=3.7 Score=39.39 Aligned_cols=83 Identities=11% Similarity=0.103 Sum_probs=63.3
Q ss_pred CCCCceeEEEEEecCCeeEEEEcccCCCChHHHhhCCCCHHHHHHHHHHHHHHHH-HHhhCCCCCcccCCCCCCCeeeCC
Q 002875 661 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLC-FLHHDCYPAIPHGDLKASNIVFDE 739 (872)
Q Consensus 661 ~H~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~i~~~i~~gl~-~lH~~~~~~i~Hrdlk~~Nill~~ 739 (872)
.||+. -...-.+++.+.+.|+--+++-=...++ ..+..++++++.+++.-.. +++.. +|--+.|+|+++|.
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~ 119 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNR 119 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECT
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeC
Confidence 58888 3444467778777777654444444553 5688899999999988777 66654 78889999999999
Q ss_pred CCCeeEcccccc
Q 002875 740 NMEPHLAEFGFK 751 (872)
Q Consensus 740 ~~~~ki~dfg~~ 751 (872)
++.+++.=.|+-
T Consensus 120 ~~~p~i~hRGi~ 131 (219)
T 4ano_A 120 ALEPFFLHVGVK 131 (219)
T ss_dssp TCCEEESCCEET
T ss_pred CCcEEEEEcCCc
Confidence 999999988874
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=78.97 E-value=0.28 Score=54.11 Aligned_cols=60 Identities=7% Similarity=-0.062 Sum_probs=18.2
Q ss_pred hhhhccCCCCCceeeeecCC-CcEEEE------EEeeccchh---HHHHHHHHHHhhccCCCCceeEEEEEec
Q 002875 612 ECEEAARPQSAAGCKAVLPT-GITVSV------KKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYN 674 (872)
Q Consensus 612 ~~~~~g~g~~~~v~~~~~~~-g~~vav------K~~~~~~~~---~~~~~~e~~~l~~l~H~niv~l~~~~~~ 674 (872)
..+.+| ||.||+|.... ..+||| |..+.+... ...+.+|..+++..+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 345565 99999999754 368999 776543322 3456777888888999999999988653
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=72.26 E-value=6.1 Score=42.37 Aligned_cols=28 Identities=25% Similarity=0.452 Sum_probs=23.7
Q ss_pred cccCCCCCCCeee------CCCCCeeEccccccc
Q 002875 725 IPHGDLKASNIVF------DENMEPHLAEFGFKY 752 (872)
Q Consensus 725 i~Hrdlk~~Nill------~~~~~~ki~dfg~~~ 752 (872)
++|.|+.+.||++ +++..++++||-+|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5699999999999 456679999998764
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=44.91 E-value=42 Score=27.49 Aligned_cols=41 Identities=12% Similarity=-0.084 Sum_probs=17.3
Q ss_pred cCCccccCCCCCcEEECcCCcCccccCccccCCCCCCEEEcc
Q 002875 57 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 98 (872)
Q Consensus 57 ~~~~~~~~l~~L~~LdL~~n~l~~~~p~~~~~L~~L~~L~L~ 98 (872)
+...+|.+++.|+.+.+..+ ++.+-..+|.++.+|+.+.+.
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33344444444444444332 222333344444444444443
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=38.38 E-value=63 Score=26.39 Aligned_cols=49 Identities=12% Similarity=0.021 Sum_probs=40.4
Q ss_pred CCCCcccCCccccCCCCCCEEECcCCcCcccCCccccCCCCCcEEECcCC
Q 002875 27 HNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 76 (872)
Q Consensus 27 ~n~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~LdL~~n 76 (872)
+..++.+...+|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34567778889999999999999765 66677889999999999988654
No 453
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=36.95 E-value=15 Score=24.89 Aligned_cols=8 Identities=0% Similarity=-0.064 Sum_probs=3.7
Q ss_pred HHHHHHHH
Q 002875 563 CAGIVMFI 570 (872)
Q Consensus 563 ~~~~~~~~ 570 (872)
++++++++
T Consensus 21 v~~~~ii~ 28 (44)
T 2ks1_B 21 LLLLLVVA 28 (44)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444444
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=33.57 E-value=9.5 Score=25.84 Aligned_cols=7 Identities=43% Similarity=0.577 Sum_probs=2.7
Q ss_pred eeeeecC
Q 002875 577 IFFFRRG 583 (872)
Q Consensus 577 ~~~~rr~ 583 (872)
++++||+
T Consensus 33 ~~~RRR~ 39 (44)
T 2jwa_A 33 ILIKRRQ 39 (44)
T ss_dssp HHHHHHC
T ss_pred hheehhh
Confidence 3334443
No 455
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=31.34 E-value=2.8e+02 Score=28.29 Aligned_cols=75 Identities=13% Similarity=0.045 Sum_probs=42.4
Q ss_pred eeEEEEcccCCCChHHHhhCCCCHHHH--HHHHHHH--HHHHHHHhhCCC--CCcccCCCCCCCeeeCCCCC-eeEcccc
Q 002875 677 QAYLLYDYLPNGNLSEKIRTKRDWAAK--YKIVLGV--ARGLCFLHHDCY--PAIPHGDLKASNIVFDENME-PHLAEFG 749 (872)
Q Consensus 677 ~~~lv~ey~~~g~L~~~l~~~~~~~~~--~~i~~~i--~~gl~~lH~~~~--~~i~Hrdlk~~Nill~~~~~-~ki~dfg 749 (872)
..+++|||.+|..|.+.-.. .|.+. .+...++ .-++++..+..+ |-+.+..-.+.||+++++.. +.++|-+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~--~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn 233 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTT--SAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK 233 (342)
T ss_dssp SEEEEEECCCEEESTTCCSS--SHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred cceehhhhcCCCccccchhh--hhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCC
Confidence 45699999997555443111 12221 1222222 334555554432 22333346789999986554 8899999
Q ss_pred cccc
Q 002875 750 FKYL 753 (872)
Q Consensus 750 ~~~~ 753 (872)
.+..
T Consensus 234 ~af~ 237 (342)
T 1cja_A 234 IIPL 237 (342)
T ss_dssp CCCC
T ss_pred cccc
Confidence 8854
Done!