BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002883
(871 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 227/573 (39%), Gaps = 121/573 (21%)
Query: 2 LQGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPXXXXXX 61
L G+ I+ C+EL++L++ N+ G IP L L L L N +TG IP
Sbjct: 232 LSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGA 289
Query: 62 XXXXXXXXXXXXX-XXXIPSELGLLKQLNMFQVSANYLTGSIPIQ-LFNISSMDYFAVTQ 119
+P G L +S+N +G +P+ L + + ++
Sbjct: 290 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSF 349
Query: 120 NKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEXXXXXXXXXXXXEDLGKLKNLIRLNFARN 179
N+ GE+P + ++ L L SN F+G KN ++ + +N
Sbjct: 350 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNP---------KNTLQELYLQN 400
Query: 180 NLGTGKGNDLRFLDSLVNCTFLEXXXXXXXXXXXXXXXXIANFSSHLIYLYMSANRISGT 239
N TGK +L NC S L+ L++S N +SGT
Sbjct: 401 NGFTGK-----IPPTLSNC-------------------------SELVSLHLSFNYLSGT 430
Query: 240 IPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVL---------------------- 277
IP+ +G+L L + + +N+L G IP + Y+ L+ L
Sbjct: 431 IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN 490
Query: 278 --SLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGT 335
SL N+++GEIP +G L L + L NS G+IP+ LG+C L LDL+ N +GT
Sbjct: 491 WISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 550
Query: 336 IP-----------------------------REVIGLSSFVLLDLSR----NHLSGPIPL 362
IP +E G + + R N LS P
Sbjct: 551 IPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC 610
Query: 363 EV-GRLKG------------IQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIH 409
+ R+ G + LD+S N LSG IP + S L LN N G I
Sbjct: 611 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
Query: 410 SGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVS 469
L+GL LDLS N G+IP ++ L +++LS NNL G +P G F+
Sbjct: 671 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAK 730
Query: 470 IIGNNKLCG--------GSPELHLHSCRSRGSR 494
+ N LCG + + + H RS G R
Sbjct: 731 FLNNPGLCGYPLPRCDPSNADGYAHHQRSHGRR 763
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 46/107 (42%)
Query: 1 MLQGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPXXXXX 60
ML+GEIP + + L L L N L G IPS L N L + L+ N TG IP
Sbjct: 450 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 509
Query: 61 XXXXXXXXXXXXXXXXXIPSELGLLKQLNMFQVSANYLTGSIPIQLF 107
IP+ELG + L ++ N G+IP +F
Sbjct: 510 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 556
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 351 LSRNHLSGPIPLEVGRLK---GIQQLDLSENKLSGEIPT--SLASCVGLEYLNFSDNS-- 403
LS +H++G V K + LDLS N LSG + T SL SC GL++LN S N+
Sbjct: 81 LSNSHING----SVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD 136
Query: 404 FQGPIHSGFSSLKGLQDLDLSRNNFSG 430
F G + G L L+ LDLS N+ SG
Sbjct: 137 FPGKVSGGL-KLNSLEVLDLSANSISG 162
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 1 MLQGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIP 55
ML G IP I L IL+L N + G+IP E+G+L L L L+ N G IP
Sbjct: 640 MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP 694
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 167/316 (52%), Gaps = 30/316 (9%)
Query: 548 KISYAELLKATEGFSSANLXXXXXXXXXXXXXXXTEETNVAVKVLDLQQ-RGASKSFIAE 606
+ S EL A++ FS+ N+ + T VAVK L ++ +G F E
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 607 CEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLN 666
E + HRNL+++ C + R LVY +M NGS+ + L ++ + Q P L+
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTER-----LLVYPYMANGSVASCLRERPESQ---PPLD 137
Query: 667 LMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSP 726
+R IA+ A L YLH HC I+H D+K +N+LLD E A VGDFGL++L+ +
Sbjct: 138 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYK 195
Query: 727 DQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHK 786
D V+G+IG++APEY + G+ S D + +G+++LE+ TG+R D
Sbjct: 196 DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD----------- 244
Query: 787 YAKMGLPDQVAEIID--PAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEE 844
A++ D V ++D +L+E +++A + +LQ N K E++ +++V +LC++
Sbjct: 245 LARLANDDDVM-LLDWVKGLLKEK-KLEALVDVDLQGNY--KDEEVE-QLIQVALLCTQS 299
Query: 845 LPRDRMKIQDAIMELQ 860
P +R K+ + + L+
Sbjct: 300 SPMERPKMSEVVRMLE 315
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 220/530 (41%), Gaps = 115/530 (21%)
Query: 2 LQGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPXXXXXX 61
L G+ I+ C+EL++L++ N+ G IP L L L L N +TG IP
Sbjct: 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLS-- 290
Query: 62 XXXXXXXXXXXXXXXXIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNK 121
G L +S N+ G++P + S ++ A++ N
Sbjct: 291 ---------------------GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN 329
Query: 122 LVGEIPHYVGFTLPNIRVLLLGSNWFTGEXXXXXXXXXXXXEDLGKLK-NLIRLNFARNN 180
GE+P + ++VL L N F+GE E L L +L+ L+ + NN
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELP----------ESLTNLSASLLTLDLSSNN 379
Query: 181 LGTGKGNDLRFLDSLVNCTFLEXXXXXXXXXXXXXXXXIANFSSHLIYLYMSANRISGTI 240
L +L N + L LY+ N +G I
Sbjct: 380 FSG------PILPNLC-----------------------QNPKNTLQELYLQNNGFTGKI 410
Query: 241 PTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTE 300
P + N L+ + + N L+G+IP+S+G L KL+ L L+ N + GEIP L + L
Sbjct: 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470
Query: 301 VDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPI 360
+ L N + G IPS L NC L + LS+N L+G IP+ + L + +L LS N SG I
Sbjct: 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 530
Query: 361 PLEVGRLKGIQQLDLSENKLSGEIPTSL--------------------------ASCVG- 393
P E+G + + LDL+ N +G IP ++ C G
Sbjct: 531 PAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGA 590
Query: 394 ---LEY----------------LNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPM 434
LE+ N + + G F + + LD+S N SG IP
Sbjct: 591 GNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK 650
Query: 435 FLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSI--IGNNKLCGGSPE 482
+ + +L LNL N++ G +P E ++R ++I + +NKL G P+
Sbjct: 651 EIGSMPYLFILNLGHNDISGSIPDE--VGDLRGLNILDLSSNKLDGRIPQ 698
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 46/107 (42%)
Query: 1 MLQGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPXXXXX 60
ML+GEIP + + L L L N L G IPS L N L + L+ N TG IP
Sbjct: 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 512
Query: 61 XXXXXXXXXXXXXXXXXIPSELGLLKQLNMFQVSANYLTGSIPIQLF 107
IP+ELG + L ++ N G+IP +F
Sbjct: 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 25/127 (19%)
Query: 15 ELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPXXXXXXXXXXXXXXXXXXX 74
+ LD+ N L G IP E+G++ L L L N+ +GSIP
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP------------------- 673
Query: 75 XXXIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGF-T 133
E+G L+ LN+ +S+N L G IP + ++ + ++ N L G IP F T
Sbjct: 674 -----DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFET 728
Query: 134 LPNIRVL 140
P + L
Sbjct: 729 FPPAKFL 735
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 351 LSRNHLSGPIPLEVGRLK---GIQQLDLSENKLSGEIPT--SLASCVGLEYLNFSDNS-- 403
LS +H++G V K + LDLS N LSG + T SL SC GL++LN S N+
Sbjct: 84 LSNSHING----SVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD 139
Query: 404 FQGPIHSGFSSLKGLQDLDLSRNNFSG 430
F G + G L L+ LDLS N+ SG
Sbjct: 140 FPGKVSGGL-KLNSLEVLDLSANSISG 165
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 2 LQGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIP 55
+ G IP + L ILDL NKL+G IP + L L + L+ NN +G IP
Sbjct: 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 1 MLQGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIP 55
ML G IP I L IL+L N + G+IP E+G+L L L L+ N G IP
Sbjct: 643 MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP 697
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 152/277 (54%), Gaps = 29/277 (10%)
Query: 587 VAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK L ++ +G F E E + HRNL+++ C + R LVY +M N
Sbjct: 57 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER-----LLVYPYMAN 111
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
GS+ + L ++ + Q P L+ +R IA+ A L YLH HC I+H D+K +N+LLD
Sbjct: 112 GSVASCLRERPESQ---PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
E A VGDFGL++L+ + D V+G IG++APEY + G+ S D + +G+++L
Sbjct: 169 EEFEAVVGDFGLAKLM--DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLL 226
Query: 766 EMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIID--PAILEEALEIQAGIVKELQPNL 823
E+ TG+R D A++ D V ++D +L+E +++A + +LQ N
Sbjct: 227 ELITGQRAFD-----------LARLANDDDVM-LLDWVKGLLKEK-KLEALVDVDLQGNY 273
Query: 824 RAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQ 860
K E++ +++V +LC++ P +R K+ + + L+
Sbjct: 274 --KDEEVE-QLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 116/245 (47%), Gaps = 7/245 (2%)
Query: 240 IPTGVGNLKNL-ILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFL 298
IP+ + NL L L +N L G IP ++ L +L L + +SG IP L + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 299 TEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSS-FVLLDLSRNHLS 357
+D N++ G++P ++ + L + N +SG IP S F + +SRN L+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 358 GPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHS-GFSSLK 416
G IP L + +DLS N L G+ S + ++ + NS + G S K
Sbjct: 188 GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLS--K 244
Query: 417 GLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKL 476
L LDL N G +P L +FL LN+SFNNL GE+P G + VS NNK
Sbjct: 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFD-VSAYANNKC 303
Query: 477 CGGSP 481
GSP
Sbjct: 304 LCGSP 308
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 224 SHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNK 283
+ L YLY++ +SG IP + +K L+ + N L+G++P S+ L L ++ GN+
Sbjct: 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160
Query: 284 ISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGL 343
ISG IP S G+ L + +S N L+G IP L
Sbjct: 161 ISGAIPDSYGSFSKL-----------------------FTSMTISRNRLTGKIPPTFANL 197
Query: 344 SSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNS 403
+ +DLSRN L G + G K Q++ L++N L+ ++ + L L+ +N
Sbjct: 198 -NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNR 255
Query: 404 FQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRF 441
G + G + LK L L++S NN G+IP N RF
Sbjct: 256 IYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRF 293
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 102/262 (38%), Gaps = 44/262 (16%)
Query: 78 IPSELGLLKQLNMFQVSA-NYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPN 136
IPS L L LN + N L G IP + ++ + Y +T + G IP +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF------- 120
Query: 137 IRVLLLGSNWFTGEXXXXXXXXXXXXEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLV 196
L ++K L+ L+F+ N L + L +LV
Sbjct: 121 ----------------------------LSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152
Query: 197 NCTFLEXXXXXXXXXXXXXXXXIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAME 256
TF +FS + +S NR++G IP NL NL + +
Sbjct: 153 GITF------DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLS 205
Query: 257 VNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSAL 316
N+L G G Q + L N ++ ++ +G L +DL+ N I G++P L
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGL 264
Query: 317 GNCLQLQKLDLSDNNLSGTIPR 338
L L++S NNL G IP+
Sbjct: 265 TQLKFLHSLNVSFNNLCGEIPQ 286
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 92/268 (34%), Gaps = 47/268 (17%)
Query: 30 IPSELGNLFKLVGLGLTG-NNYTGSIPXXXXXXXXXXXXXXXXXXXXXXIPSELGLLKQL 88
IPS L NL L L + G NN G IP IP L +K L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 89 NMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFT 148
S N L+G++P + ++ ++ N++ G IP G + + N T
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 149 GEXXXXXXXXXXXXEDL-------------GKLKNLIRLNFARNNLGTGKGNDLRFLDSL 195
G+ DL G KN +++ A+N+L G
Sbjct: 188 GKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-------- 239
Query: 196 VNCTFLEXXXXXXXXXXXXXXXXIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAM 255
S +L L + NRI GT+P G+ LK L + +
Sbjct: 240 ------------------------VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV 275
Query: 256 EVNLLTGSIPTSVGYLLKLQVLSLFGNK 283
N L G IP G L + V + NK
Sbjct: 276 SFNNLCGEIPQG-GNLQRFDVSAYANNK 302
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 585 TNVAVKVL----DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
T VAVK L D+ + F E + + +H NLV+++ + G++ LVY
Sbjct: 55 TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVY 109
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+MPNGSL + L+ + P L+ R IA AN + +LH + H +H D+K +
Sbjct: 110 VYMPNGSLLDRLSC----LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSA 162
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+LLD A + DFGL+R + SR+ G+ Y+APE GE++ D YSF
Sbjct: 163 NILLDEAFTAKISDFGLAR-ASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSF 220
Query: 761 GILMLEMFTGKRPTDDMFEEGLSL 784
G+++LE+ TG D+ E L L
Sbjct: 221 GVVLLEIITGLPAVDEHREPQLLL 244
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 585 TNVAVK----VLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
T VAVK ++D+ + F E + + +H NLV+++ S D LVY
Sbjct: 55 TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL-----CLVY 109
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+MPNGSL + L+ + P L+ R IA AN + +LH + H +H D+K +
Sbjct: 110 VYMPNGSLLDRLSC----LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSA 162
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+LLD A + DFGL+R + R+ G+ Y+APE GE++ D YSF
Sbjct: 163 NILLDEAFTAKISDFGLAR-ASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSF 220
Query: 761 GILMLEMFTGKRPTDDMFEEGLSL 784
G+++LE+ TG D+ E L L
Sbjct: 221 GVVLLEIITGLPAVDEHREPQLLL 244
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 585 TNVAVK----VLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
T VAVK ++D+ + F E + + +H NLV+++ + G++ LVY
Sbjct: 49 TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVY 103
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+MPNGSL + L+ + P L+ R IA AN + +LH + H +H D+K +
Sbjct: 104 VYMPNGSLLDRLSC----LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSA 156
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+LLD A + DFGL+R + R+ G+ Y+APE GE++ D YSF
Sbjct: 157 NILLDEAFTAKISDFGLAR-ASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSF 214
Query: 761 GILMLEMFTGKRPTDDMFEEGLSL 784
G+++LE+ TG D+ E L L
Sbjct: 215 GVVLLEIITGLPAVDEHREPQLLL 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 585 TNVAVKVL----DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
T VAVK L D+ + F E + +H NLV+++ S D LVY
Sbjct: 46 TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDL-----CLVY 100
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+ PNGSL + L+ + P L+ R IA AN + +LH + H +H D+K +
Sbjct: 101 VYXPNGSLLDRLSC----LDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSA 153
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+LLD A + DFGL+R + SR+ G+ Y APE GE++ D YSF
Sbjct: 154 NILLDEAFTAKISDFGLAR-ASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSF 211
Query: 761 GILMLEMFTGKRPTDDMFEEGLSL 784
G+++LE+ TG D+ E L L
Sbjct: 212 GVVLLEIITGLPAVDEHREPQLLL 235
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 131/261 (50%), Gaps = 38/261 (14%)
Query: 614 RHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLM--QRL 671
RH +LV +I C D R NE L+Y++M NG+L+ L + P +++ QRL
Sbjct: 93 RHPHLVSLIGFC---DER-NEM-ILIYKYMENGNLKRHLYGSD-----LPTMSMSWEQRL 142
Query: 672 SIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST 731
I I A L YLH +I+H D+K N+LLD V + DFG+S+ DQT
Sbjct: 143 EICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHL 197
Query: 732 SRV-KGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP-TDDMFEEGLSLHKYAK 789
V KG++GY+ PEY G ++ D YSFG+++ E+ + + E ++L ++A
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 790 MGLPD-QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRD 848
+ Q+ +I+DP + +++P KF + V L L SE D
Sbjct: 258 ESHNNGQLEQIVDP-----------NLADKIRPESLRKFGDTAVKCL---ALSSE----D 299
Query: 849 RMKIQDAIMELQEAQKMRQAI 869
R + D + +L+ A ++++++
Sbjct: 300 RPSMGDVLWKLEYALRLQESV 320
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 38/261 (14%)
Query: 614 RHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLM--QRL 671
RH +LV +I C D R NE L+Y++M NG+L+ L + P +++ QRL
Sbjct: 93 RHPHLVSLIGFC---DER-NEM-ILIYKYMENGNLKRHLYGSD-----LPTMSMSWEQRL 142
Query: 672 SIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST 731
I I A L YLH +I+H D+K N+LLD V + DFG+S+ QT
Sbjct: 143 EICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHL 197
Query: 732 SRV-KGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP-TDDMFEEGLSLHKYAK 789
V KG++GY+ PEY G ++ D YSFG+++ E+ + + E ++L ++A
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 790 MGLPD-QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRD 848
+ Q+ +I+DP + +++P KF + V L L SE D
Sbjct: 258 ESHNNGQLEQIVDP-----------NLADKIRPESLRKFGDTAVKCL---ALSSE----D 299
Query: 849 RMKIQDAIMELQEAQKMRQAI 869
R + D + +L+ A ++++++
Sbjct: 300 RPSMGDVLWKLEYALRLQESV 320
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 30/205 (14%)
Query: 583 EETNVAVKVLD----LQQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E+ VA+K L +QR + F++E + H N+++ ++T+ +
Sbjct: 43 KESCVAIKTLKGGYTERQR---REFLSEASIMGQFEHPNIIRLEGVVTNSMPV------- 92
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
++ EFM NG+L+++L + + ++Q + + +A+ + YL S VH
Sbjct: 93 -MILTEFMENGALDSFLRLNDGQ------FTVIQLVGMLRGIASGMRYL---AEMSYVHR 142
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG--YVAPEYGALGEVST 753
DL N+L+++ +V V DFGLSR L +NS D T TS + G I + APE A + ++
Sbjct: 143 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTS 202
Query: 754 HGDEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI+M E+ + G+RP DM
Sbjct: 203 ASDAWSYGIVMWEVMSFGERPYWDM 227
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 30/205 (14%)
Query: 583 EETNVAVKVLD----LQQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E+ VA+K L +QR + F++E + H N+++ ++T+ +
Sbjct: 41 KESCVAIKTLKGGYTERQR---REFLSEASIMGQFEHPNIIRLEGVVTNSMPV------- 90
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
++ EFM NG+L+++L + + ++Q + + +A+ + YL S VH
Sbjct: 91 -MILTEFMENGALDSFLRLNDGQ------FTVIQLVGMLRGIASGMRYL---AEMSYVHR 140
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG--YVAPEYGALGEVST 753
DL N+L+++ +V V DFGLSR L +NS D T TS + G I + APE A + ++
Sbjct: 141 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTS 200
Query: 754 HGDEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI+M E+ + G+RP DM
Sbjct: 201 ASDAWSYGIVMWEVMSFGERPYWDM 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 32/231 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL 638
+ VA+K L +QR + F++E + H N++++ + TRG +
Sbjct: 76 RDVPVAIKALKAGYTERQR---RDFLSEASIMGQFDHPNIIRL----EGVVTRGR-LAMI 127
Query: 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698
V E+M NGSL+ +L + + +MQ + + V + YL VH DL
Sbjct: 128 VTEYMENGSLDTFLRTHDGQ------FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLA 178
Query: 699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEY 758
NVL+D+ +V V DFGLSR+L D+ +T+ K I + APE A S+ D +
Sbjct: 179 ARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVW 238
Query: 759 SFGILMLEMFT-GKRPTDDM--------FEEGLSLHKYAKMGLPDQVAEII 800
SFG++M E+ G+RP +M EEG L A MG P + +++
Sbjct: 239 SFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP--APMGCPHALHQLM 287
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 32/231 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL 638
+ VA+K L +QR + F++E + H N++++ + TRG +
Sbjct: 76 RDVPVAIKALKAGYTERQR---RDFLSEASIMGQFDHPNIIRL----EGVVTRGR-LAMI 127
Query: 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698
V E+M NGSL+ +L + + +MQ + + V + YL VH DL
Sbjct: 128 VTEYMENGSLDTFLRTHDGQ------FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLA 178
Query: 699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEY 758
NVL+D+ +V V DFGLSR+L D+ +T+ K I + APE A S+ D +
Sbjct: 179 ARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVW 238
Query: 759 SFGILMLEMFT-GKRPTDDM--------FEEGLSLHKYAKMGLPDQVAEII 800
SFG++M E+ G+RP +M EEG L A MG P + +++
Sbjct: 239 SFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP--APMGCPHALHQLM 287
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 33 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIXIVTEYMS 85
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 86 KGSLLDFLKGETGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 137
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 138 GENLVCKVADFGLARLIEDN--EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 195
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 196 TELTTKGRVPYPGM 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ IRH LV++ S E +V E+M
Sbjct: 43 TRVAIKTLKPGTM-SPEAFLQEAQVMKKIRHEKLVQLYAVVSE------EPIYIVTEYMS 95
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 96 KGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 147
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 148 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 206 TELTTKGRVPYPGM 219
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + +SF+ E + ++ ++H LV++ S E +V E+M
Sbjct: 34 TKVAIKTLKPGTM-SPESFLEEAQIMKKLKHDKLVQLYAVVSE------EPIYIVTEYMN 86
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L E + P L + +A VA + Y+ + +H DL+ +N+L+
Sbjct: 87 KGSLLDFLKDGEGRALKLPNL-----VDMAAQVAAGMAYIER---MNYIHRDLRSANILV 138
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
N ++ + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 139 GNGLICKIADFGLARLIEDN--EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 196
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 197 TELVTKGRVPYPGM 210
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 583 EETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ T VAVK + ++F+AE +++++H LVK+ ++ T+ E ++ EF
Sbjct: 38 KHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKL----HAVVTK--EPIYIITEF 90
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
M GSL ++L E + PKL + + +A + ++ + +H DL+ +N+
Sbjct: 91 MAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQR---NYIHRDLRAANI 142
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGI 762
L+ +V + DFGL+R++ DN + T+ K I + APE G + D +SFGI
Sbjct: 143 LVSASLVCKIADFGLARVIEDN--EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGI 200
Query: 763 LMLEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
L++E+ T G+ P M + +L + +M P+ E
Sbjct: 201 LLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE 239
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 209 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIYIVTEYMS 261
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 262 KGSLLDFLKGETGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 313
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 314 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 371
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 372 TELTTKGRVPYPGM 385
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 209 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIYIVTEYMS 261
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 262 KGSLLDFLKGETGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 313
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 314 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 371
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 372 TELTTKGRVPYPGM 385
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 17/188 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 292 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIYIVTEYMS 344
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 345 KGSLLDFLKGETGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 396
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 397 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 454
Query: 765 LEMFTGKR 772
E+ T R
Sbjct: 455 TELTTKGR 462
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 43 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVIEYMS 95
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 96 KGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 147
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 148 GENLVCKVADFGLARLIEDN--EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 206 TELTTKGRVPYPGM 219
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 36 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVTEYMS 88
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 89 KGSLLDFLKGETGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 140
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 141 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 198
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 199 TELTTKGRVPYPGM 212
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 43 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVIEYMS 95
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 96 KGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 147
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 148 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 206 TELTTKGRVPYPGM 219
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 209 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIYIVGEYMS 261
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 262 KGSLLDFLKGETGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 313
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 314 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 371
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 372 TELTTKGRVPYPGM 385
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 32 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVTEYMS 84
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 85 KGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 136
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 137 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 194
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 195 TELTTKGRVPYPGM 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 34 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVTEYMS 86
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 87 KGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 138
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 139 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 196
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 197 TELTTKGRVPYPGM 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 43 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVTEYMS 95
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 96 KGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 147
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 148 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 206 TELTTKGRVPYPGM 219
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 30/204 (14%)
Query: 584 ETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEFK 636
E VA+K L +QR + F++E + H N++ ++T + +
Sbjct: 61 EIFVAIKTLKSGYTEKQR---RDFLSEASIMGQFDHPNVIHLEGVVTKSTPV-------- 109
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ EFM NGSL+++L Q + + ++Q + + +A ++YL + VH D
Sbjct: 110 MIITEFMENGSLDSFLRQNDGQ------FTVIQLVGMLRGIAAGMKYL---ADMNYVHRD 160
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG--YVAPEYGALGEVSTH 754
L N+L+++ +V V DFGLSR L D++ D T TS + G I + APE + ++
Sbjct: 161 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA 220
Query: 755 GDEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI+M E+ + G+RP DM
Sbjct: 221 SDVWSYGIVMWEVMSYGERPYWDM 244
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 43 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVCEYMS 95
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 96 KGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 147
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 148 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 206 TELTTKGRVPYPGM 219
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 210 TRVAIKTLKPGNM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIYIVTEYMS 262
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 263 KGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 314
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 315 GENLVCKVADFGLGRLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 372
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 373 TELTTKGRVPYPGM 386
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ EF+P G
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEFLPYG 101
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL +L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 102 SLREYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 152
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 212
Query: 767 MFT 769
+FT
Sbjct: 213 LFT 215
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK + ++F+AE +++++H LVK+ + E ++ EFM
Sbjct: 213 TKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT------KEPIYIITEFMA 265
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L E + PKL + + +A + ++ + +H DL+ +N+L+
Sbjct: 266 KGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRNY---IHRDLRAANILV 317
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V + DFGL+R++ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 318 SASLVCKIADFGLARVIEDN--EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 375
Query: 765 LEMFT-GKRPTDDM 777
+E+ T G+ P M
Sbjct: 376 MEIVTYGRIPYPGM 389
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.8 bits (203), Expect = 7e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 46 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 98
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 99 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 150
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 151 SDTLSCKIADFGLARLIEDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 208
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 209 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 245
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 116
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 117 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 167
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 168 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 227
Query: 767 MFT 769
+FT
Sbjct: 228 LFT 230
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.8 bits (203), Expect = 7e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 44 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 96
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 97 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 148
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 149 SDTLSCKIADFGLARLIEDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 207 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 243
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.8 bits (203), Expect = 7e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 38 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 90
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 91 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 142
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 143 SDTLSCKIADFGLARLIEDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 237
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 82.8 bits (203), Expect = 7e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 47 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 99
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 100 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 151
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 152 SDTLSCKIADFGLARLIEDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 209
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 210 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 246
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 82.8 bits (203), Expect = 7e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 38 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 90
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 91 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 142
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 143 SDTLSCKIADFGLARLIEDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 237
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.8 bits (203), Expect = 7e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 39 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 91
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 92 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 143
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 144 SDTLSCKIADFGLARLIEDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 201
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 202 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 238
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.8 bits (203), Expect = 7e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 40 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 92
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 93 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 144
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 145 SDTLSCKIADFGLARLIEDN--EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 202
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 203 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 239
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 116
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 117 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 167
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 168 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 227
Query: 767 MFT 769
+FT
Sbjct: 228 LFT 230
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 104
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 105 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 155
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 156 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 215
Query: 767 MFT 769
+FT
Sbjct: 216 LFT 218
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 40 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVTEYMN 92
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + ++ +A+ + Y+ + VH DL+ +N+L+
Sbjct: 93 KGSLLDFLKGETGKY-----LRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILV 144
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 145 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 202
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 203 TELTTKGRVPYPGM 216
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 43 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVTEYMS 95
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + +A +A+ + Y+ + VH DL +N+L+
Sbjct: 96 KGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLAAANILV 147
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 148 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 206 TELTTKGRVPYPGM 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 129
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 130 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 180
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 181 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 240
Query: 767 MFT 769
+FT
Sbjct: 241 LFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 103
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 104 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 154
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 155 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 214
Query: 767 MFT 769
+FT
Sbjct: 215 LFT 217
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 15/191 (7%)
Query: 585 TNVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
++VAVK+L Q A + F+ E ++ +RH N+V + + + ++V E+
Sbjct: 61 SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL-----SIVTEY 115
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
+ GSL L++ R +L+ +RLS+A DVA + YLH+ + IVH DLK N+
Sbjct: 116 LSRGSLYRLLHK----SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNL 170
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGI 762
L+D + V DFGLSRL + + G+ ++APE + D YSFG+
Sbjct: 171 LVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGV 227
Query: 763 LMLEMFTGKRP 773
++ E+ T ++P
Sbjct: 228 ILWELATLQQP 238
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 101
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 102 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 152
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 212
Query: 767 MFT 769
+FT
Sbjct: 213 LFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 98
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 99 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 149
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 209
Query: 767 MFT 769
+FT
Sbjct: 210 LFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 96
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 97 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 147
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 148 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 207
Query: 767 MFT 769
+FT
Sbjct: 208 LFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 105
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 106 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 156
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 157 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 216
Query: 767 MFT 769
+FT
Sbjct: 217 LFT 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 98
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 99 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 149
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 209
Query: 767 MFT 769
+FT
Sbjct: 210 LFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 102
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 103 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 153
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 154 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 213
Query: 767 MFT 769
+FT
Sbjct: 214 LFT 216
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.4 bits (202), Expect = 9e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 44 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 96
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 97 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 148
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 149 SDTLSCKIADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 207 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 243
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.4 bits (202), Expect = 9e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 48 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 100
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 101 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 152
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 153 SDTLSCKIADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 210
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 211 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 247
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.4 bits (202), Expect = 9e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 38 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 90
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 91 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 142
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 143 SDTLSCKIADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 237
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.4 bits (202), Expect = 9e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 43 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 95
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 96 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 147
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 148 SDTLSCKIADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 205
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 206 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 242
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 40 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVTEYMN 92
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L + + L L Q + ++ +A+ + Y+ + VH DL+ +N+L+
Sbjct: 93 KGSLLDFLKGETGKY-----LRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILV 144
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 145 GENLVCKVADFGLARLIEDN--EWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 202
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 203 TELTTKGRVPYPGM 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 97
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 98 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 148
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 149 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 208
Query: 767 MFT 769
+FT
Sbjct: 209 LFT 211
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 22/194 (11%)
Query: 586 NVAVKVLDLQQRGA--SKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VA+K + + GA + FI E E + + H LV++ C LV+EFM
Sbjct: 33 KVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPICLVFEFM 84
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
+G L ++L + QR L + +DV + YL C ++H DL N L
Sbjct: 85 EHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCL 135
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
+ V V DFG++R + D+ TS++ K + + +PE + S+ D +SFG+L
Sbjct: 136 VGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 193
Query: 764 MLEMFT-GKRPTDD 776
M E+F+ GK P ++
Sbjct: 194 MWEVFSEGKIPYEN 207
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 22/194 (11%)
Query: 586 NVAVKVLDLQQRGA--SKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VA+K + + GA + FI E E + + H LV++ C LV+EFM
Sbjct: 31 KVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPICLVFEFM 82
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
+G L ++L + QR L + +DV + YL C ++H DL N L
Sbjct: 83 EHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCL 133
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
+ V V DFG++R + D+ TS++ K + + +PE + S+ D +SFG+L
Sbjct: 134 VGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 191
Query: 764 MLEMFT-GKRPTDD 776
M E+F+ GK P ++
Sbjct: 192 MWEVFSEGKIPYEN 205
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 22/194 (11%)
Query: 586 NVAVKVLDLQQRGA--SKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VA+K + + GA + FI E E + + H LV++ C LV+EFM
Sbjct: 36 KVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPICLVFEFM 87
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
+G L ++L + QR L + +DV + YL C ++H DL N L
Sbjct: 88 EHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCL 138
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
+ V V DFG++R + D+ TS++ K + + +PE + S+ D +SFG+L
Sbjct: 139 VGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 196
Query: 764 MLEMFT-GKRPTDD 776
M E+F+ GK P ++
Sbjct: 197 MWEVFSEGKIPYEN 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 20/195 (10%)
Query: 583 EETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL--V 639
+E VA+K L + F+ E + H N++++ S ++K + +
Sbjct: 72 KEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-------KYKPMMII 124
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
E+M NG+L+ +L +K+ E +++Q + + +A ++YL + + VH DL
Sbjct: 125 TEYMENGALDKFLREKDGE------FSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAA 175
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYS 759
N+L+++ +V V DFGLSR+L D+ +TS K I + APE + + ++ D +S
Sbjct: 176 RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWS 235
Query: 760 FGILMLEMFT-GKRP 773
FGI+M E+ T G+RP
Sbjct: 236 FGIVMWEVMTYGERP 250
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 38/218 (17%)
Query: 584 ETNVAVKVL-----DLQQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
E VA+K L D Q+R F++E + H N++ ++T C +
Sbjct: 42 EICVAIKTLKAGYTDKQRR----DFLSEASIMGQFDHPNIIHLEGVVTKCKPV------- 90
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
++ E+M NGSL+ +L + + + ++Q + + + + ++YL S VH
Sbjct: 91 -MIITEYMENGSLDAFLRKNDG------RFTVIQLVGMLRGIGSGMKYLSD---MSYVHR 140
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFG+SR+L D+ +T K I + APE A + ++
Sbjct: 141 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS 200
Query: 756 DEYSFGILMLEMFT-GKRPTDDM--------FEEGLSL 784
D +S+GI+M E+ + G+RP DM EEG L
Sbjct: 201 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL 238
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 43 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVMEYMS 95
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
G L ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 96 KGCLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 147
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 148 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 206 TELTTKGRVPYPGM 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 38/219 (17%)
Query: 583 EETNVAVKVL-----DLQQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNE 634
E VA+K L D Q+R F++E + H N++ ++T C +
Sbjct: 35 REICVAIKTLKAGYTDKQRR----DFLSEASIMGQFDHPNIIHLEGVVTKCKPV------ 84
Query: 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVH 694
++ E+M NGSL+ +L + + + ++Q + + + + ++YL S VH
Sbjct: 85 --MIITEYMENGSLDAFLRKNDG------RFTVIQLVGMLRGIGSGMKYLSD---MSYVH 133
Query: 695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH 754
DL N+L+++ +V V DFG+SR+L D+ +T K I + APE A + ++
Sbjct: 134 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 193
Query: 755 GDEYSFGILMLEMFT-GKRPTDDM--------FEEGLSL 784
D +S+GI+M E+ + G+RP DM EEG L
Sbjct: 194 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 101/191 (52%), Gaps = 15/191 (7%)
Query: 585 TNVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
++VAVK+L Q A + F+ E ++ +RH N+V + + + ++V E+
Sbjct: 61 SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL-----SIVTEY 115
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
+ GSL L++ R +L+ +RLS+A DVA + YLH+ + IVH +LK N+
Sbjct: 116 LSRGSLYRLLHK----SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNL 170
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGI 762
L+D + V DFGLSRL + S+ G+ ++APE + D YSFG+
Sbjct: 171 LVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGV 227
Query: 763 LMLEMFTGKRP 773
++ E+ T ++P
Sbjct: 228 ILWELATLQQP 238
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 30/203 (14%)
Query: 584 ETNVAVKVL-----DLQQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
E VA+K L D Q+R F++E + H N++ ++T C +
Sbjct: 57 EICVAIKTLKAGYTDKQRR----DFLSEASIMGQFDHPNIIHLEGVVTKCKPV------- 105
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
++ E+M NGSL+ +L + + + ++Q + + + + ++YL S VH
Sbjct: 106 -MIITEYMENGSLDAFLRKNDG------RFTVIQLVGMLRGIGSGMKYLSD---MSAVHR 155
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFG+SR+L D+ +T K I + APE A + ++
Sbjct: 156 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS 215
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI+M E+ + G+RP DM
Sbjct: 216 DVWSYGIVMWEVMSYGERPYWDM 238
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VA+K L + ++F+ E + ++ +RH LV++ S E +V E+M
Sbjct: 43 TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYIVTEYMS 95
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
G L ++L + + L L Q + +A +A+ + Y+ + VH DL+ +N+L+
Sbjct: 96 KGCLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILV 147
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V V DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 148 GENLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 765 LEMFT-GKRPTDDM 777
E+ T G+ P M
Sbjct: 206 TELTTKGRVPYPGM 219
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 33 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 85
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 86 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILV 137
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 138 SDTLSCKIADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 195
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 196 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 232
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 18/192 (9%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VA+K + + + FI E E + + H LV++ C LV+EFM +
Sbjct: 53 KVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPICLVFEFMEH 106
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L + QR L + +DV + YL C ++H DL N L+
Sbjct: 107 GCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVG 157
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
V V DFG++R + D+ TS++ K + + +PE + S+ D +SFG+LM
Sbjct: 158 ENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 215
Query: 766 EMFT-GKRPTDD 776
E+F+ GK P ++
Sbjct: 216 EVFSEGKIPYEN 227
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 20/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 98
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H DL N+L++N
Sbjct: 99 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 149
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVK----GSIGYVAPEYGALGEVSTHGDEYSFGI 762
E +GDFGL+++L P +VK I + APE + S D +SFG+
Sbjct: 150 ENRVKIGDFGLTKVL----PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 205
Query: 763 LMLEMFT 769
++ E+FT
Sbjct: 206 VLYELFT 212
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 22/194 (11%)
Query: 586 NVAVKVLDLQQRGA--SKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VA+K + + GA + FI E E + + H LV++ C LV+EFM
Sbjct: 33 KVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPICLVFEFM 84
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
+G L ++L + QR L + +DV + YL S++H DL N L
Sbjct: 85 EHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDLAARNCL 135
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
+ V V DFG++R + D+ TS++ K + + +PE + S+ D +SFG+L
Sbjct: 136 VGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 193
Query: 764 MLEMFT-GKRPTDD 776
M E+F+ GK P ++
Sbjct: 194 MWEVFSEGKIPYEN 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 30/205 (14%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
E VA+K L +QR + F++E + H N++ ++T + +
Sbjct: 34 REIFVAIKTLKSGYTEKQR---RDFLSEASIMGQFDHPNVIHLEGVVTKSTPV------- 83
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
++ EFM NGSL+++L Q + + ++Q + + +A ++YL + VH
Sbjct: 84 -MIITEFMENGSLDSFLRQNDGQ------FTVIQLVGMLRGIAAGMKYL---ADMNYVHR 133
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG--YVAPEYGALGEVST 753
L N+L+++ +V V DFGLSR L D++ D T TS + G I + APE + ++
Sbjct: 134 ALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTS 193
Query: 754 HGDEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI+M E+ + G+RP DM
Sbjct: 194 ASDVWSYGIVMWEVMSYGERPYWDM 218
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 586 NVAVKVLDLQQRGAS-KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK L + G E E LR++ H N+VK C+ + GN K L+ EF+P
Sbjct: 52 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICT--EDGGNGIK-LIMEFLP 108
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
+GSL+ +L + ++ K+NL Q+L A+ + ++YL VH DL NVL+
Sbjct: 109 SGSLKEYLPKNKN------KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLV 159
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
++E +GDFGL++ + + T + + APE + D +SFG+ +
Sbjct: 160 ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL 219
Query: 765 LEMFT 769
E+ T
Sbjct: 220 HELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 586 NVAVKVLDLQQRGAS-KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK L + G E E LR++ H N+VK C+ + GN K L+ EF+P
Sbjct: 40 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICT--EDGGNGIK-LIMEFLP 96
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
+GSL+ +L + ++ K+NL Q+L A+ + ++YL VH DL NVL+
Sbjct: 97 SGSLKEYLPKNKN------KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLV 147
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
++E +GDFGL++ + + T + + APE + D +SFG+ +
Sbjct: 148 ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL 207
Query: 765 LEMFT 769
E+ T
Sbjct: 208 HELLT 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 12/183 (6%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 101
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q +++ ++ L + +EYL +H DL N+L++N
Sbjct: 102 SLRDYL------QAHAERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVEN 152
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
E +GDFGL+++L + + I + APE + S D +SFG+++ E
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 212
Query: 767 MFT 769
+FT
Sbjct: 213 LFT 215
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 586 NVAVKVLDLQQRGA--SKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VA+K + + GA + FI E E + + H LV++ C LV EFM
Sbjct: 34 KVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPICLVTEFM 85
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
+G L ++L + QR L + +DV + YL C ++H DL N L
Sbjct: 86 EHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCL 136
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
+ V V DFG++R + D+ TS++ K + + +PE + S+ D +SFG+L
Sbjct: 137 VGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194
Query: 764 MLEMFT-GKRPTDD 776
M E+F+ GK P ++
Sbjct: 195 MWEVFSEGKIPYEN 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 42 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIIIEFMTYG 95
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 96 NLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 147
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 148 NHLVKVADFGLSRLMTGDT--XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 205
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 206 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 246
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 34 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 86
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H +L+ +N+L+
Sbjct: 87 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNY---IHRNLRAANILV 138
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 139 SDTLSCKIADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 196
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 197 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 233
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 46 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 99
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 100 NLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 151
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 152 NHLVKVADFGLSRLMTGDT--XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 210 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 250
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L Q + +F+AE ++ ++H+ LV++ + E ++ E+M
Sbjct: 38 TKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYIITEYME 90
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
NGSL ++L KL + + L +A +A + ++ + +H DL+ +N+L+
Sbjct: 91 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV 142
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ + + DFGL+RL+ D + T+ K I + APE G + D +SFGIL+
Sbjct: 143 SDTLSCKIADFGLARLIED--AEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 765 LEMFT-GKRPTDDMFEEGL--SLHKYAKMGLPDQVAE 798
E+ T G+ P M + +L + +M PD E
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 237
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 42 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 95
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 96 NLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 147
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 148 NHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 205
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 206 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 246
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 43 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 96
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 97 NLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 148
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 149 NHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 207 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 247
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 20/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + F E E L+S++H N+VK C S R L+ E++P G
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN---LKLIMEYLPYG 99
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL ++L Q + +++ ++ L + +EYL +H +L N+L++N
Sbjct: 100 SLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVEN 150
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVK----GSIGYVAPEYGALGEVSTHGDEYSFGI 762
E +GDFGL+++L P +VK I + APE + S D +SFG+
Sbjct: 151 ENRVKIGDFGLTKVL----PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 206
Query: 763 LMLEMFT 769
++ E+FT
Sbjct: 207 VLYELFT 213
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 60 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 109
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E+M NGSL+++L +K D Q ++Q + + +A+ ++YL + VH
Sbjct: 110 -MIVTEYMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGY---VHR 159
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGLSR+L D+ +T K I + +PE A + ++
Sbjct: 160 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 219
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 220 DVWSYGIVLWEVMSYGERPYWEM 242
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 46 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIIIEFMTYG 99
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 100 NLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 151
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 152 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 210 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 250
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 46 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 99
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 100 NLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 151
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 152 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 210 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 250
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 41 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 94
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 95 NLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 146
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 147 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 245
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 45 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 98
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 99 NLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 150
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 151 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 208
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 209 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 249
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 41 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 94
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 95 NLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 146
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 147 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 245
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 43 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 96
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 97 NLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 148
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 149 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 207 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 247
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 43 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 96
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 97 NLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 148
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 149 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 207 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 247
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 43 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 92
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E+M NGSL+++L +K D Q ++Q + + +A+ ++YL + VH
Sbjct: 93 -MIVTEYMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGY---VHR 142
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGLSR+L D+ +T K I + +PE A + ++
Sbjct: 143 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 202
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 203 DVWSYGIVLWEVMSYGERPYWEM 225
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM
Sbjct: 53 TVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTY 106
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 107 GNLLDYLRE-----CNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG 158
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+
Sbjct: 159 ENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 216
Query: 766 EMFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
E+ T P D+ + L K +M G P++V E++
Sbjct: 217 EIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 258
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 26/212 (12%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+ +VA+K++ + + FI E + + ++ H LV++ C+ ++ E+M
Sbjct: 48 QYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRPIFIITEYM 101
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
NG L N+L + R + Q L + DV +EYL +H DL N L
Sbjct: 102 ANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCL 152
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
++++ V V DFGLSR + D+ ++TS+ K + + PE + S+ D ++FG+L
Sbjct: 153 VNDQGVVKVSDFGLSRYVLDD--EETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 210
Query: 764 MLEMFT-GKRP--------TDDMFEEGLSLHK 786
M E+++ GK P T + +GL L++
Sbjct: 211 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 242
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM
Sbjct: 45 TVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTY 98
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G+L ++L + R ++N + L +A +++ +EYL + +H DL N L+
Sbjct: 99 GNLLDYLRE-----CNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG 150
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+
Sbjct: 151 ENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 208
Query: 766 EMFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
E+ T P D+ + L K +M G P++V E++
Sbjct: 209 EIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 250
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 72 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 121
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E+M NGSL+++L +K D Q ++Q + + +A+ ++YL VH
Sbjct: 122 -MIVTEYMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYL---SDMGFVHR 171
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGLSR+L D+ +T K I + +PE A + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 27/224 (12%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK L + + F+ E ++ I+H NLV+++ C T F +V E+MP
Sbjct: 59 TVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TLEPPF-YIVTEYMPY 112
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G+L ++L + R ++ + L +A +++ +EYL + +H DL N L+
Sbjct: 113 GNLLDYLRE-----CNREEVTAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG 164
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
V V DFGLSRL+ ++ T+ + K I + APE A S D ++FG+L+
Sbjct: 165 ENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLW 222
Query: 766 EMFT-GKRPTD--------DMFEEGLSLHKYAKMGLPDQVAEII 800
E+ T G P D+ E+G + + G P +V E++
Sbjct: 223 EIATYGMSPYPGIDLSQVYDLLEKGYRMEQ--PEGCPPKVYELM 264
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 72 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 121
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E+M NGSL+++L +K D Q ++Q + + +A+ ++YL + VH
Sbjct: 122 -MIVTEYMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGY---VHR 171
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGLSR+L D+ +T K I + +PE A + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 72 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 121
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E+M NGSL+++L +K D Q ++Q + + +A+ ++YL + VH
Sbjct: 122 -MIVTEYMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGY---VHR 171
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGLSR+L D+ +T K I + +PE A + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 72 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 121
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E+M NGSL+++L +K D Q ++Q + + +A+ ++YL + VH
Sbjct: 122 -MIVTEYMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGY---VHR 171
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGLSR+L D+ +T K I + +PE A + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 72 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 121
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E+M NGSL+++L +K D Q ++Q + + +A+ ++YL + VH
Sbjct: 122 -MIVTEYMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGY---VHR 171
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGLSR+L D+ +T K I + +PE A + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 70 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 119
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E+M NGSL+++L +K D Q ++Q + + +A+ ++YL + VH
Sbjct: 120 -MIVTEYMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGY---VHR 169
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGLSR+L D+ +T K I + +PE A + ++
Sbjct: 170 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 229
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 230 DVWSYGIVLWEVMSYGERPYWEM 252
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+ +VA+K++ + + FI E + + ++ H LV++ C+ ++ E+M
Sbjct: 33 QYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRPIFIITEYM 86
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
NG L N+L + R + Q L + DV +EYL +H DL N L
Sbjct: 87 ANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCL 137
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
++++ V V DFGLSR + D+ + TS+ K + + PE + S+ D ++FG+L
Sbjct: 138 VNDQGVVKVSDFGLSRYVLDD--EYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 195
Query: 764 MLEMFT-GKRP--------TDDMFEEGLSLHK 786
M E+++ GK P T + +GL L++
Sbjct: 196 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 227
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L A K F E E L +++H ++VK C D +V+E+M +G
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL-----IMVFEYMKHG 102
Query: 647 SLENWLNQKE-------DEQNQRPK--LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
L +L D Q ++ K L L Q L IA +A+ + YL VH DL
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDL 159
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVST 753
N L+ ++ +GDFG+SR ++ T RV G I ++ PE + +T
Sbjct: 160 ATRNCLVGANLLVKIGDFGMSRDVYS-----TDYYRVGGHTMLPIRWMPPESIMYRKFTT 214
Query: 754 HGDEYSFGILMLEMFT-GKRP 773
D +SFG+++ E+FT GK+P
Sbjct: 215 ESDVWSFGVILWEIFTYGKQP 235
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+ +VA+K++ + + FI E + + ++ H LV++ C+ ++ E+M
Sbjct: 28 QYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRPIFIITEYM 81
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
NG L N+L + R + Q L + DV +EYL +H DL N L
Sbjct: 82 ANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCL 132
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
++++ V V DFGLSR + D+ + TS+ K + + PE + S+ D ++FG+L
Sbjct: 133 VNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 190
Query: 764 MLEMFT-GKRP--------TDDMFEEGLSLHK 786
M E+++ GK P T + +GL L++
Sbjct: 191 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 222
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+ +VA+K++ + + FI E + + ++ H LV++ C+ ++ E+M
Sbjct: 48 QYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRPIFIITEYM 101
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
NG L N+L + R + Q L + DV +EYL +H DL N L
Sbjct: 102 ANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCL 152
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
++++ V V DFGLSR + D+ + TS+ K + + PE + S+ D ++FG+L
Sbjct: 153 VNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 210
Query: 764 MLEMFT-GKRP--------TDDMFEEGLSLHK 786
M E+++ GK P T + +GL L++
Sbjct: 211 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 242
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+ +VA+K++ + + FI E + + ++ H LV++ C+ ++ E+M
Sbjct: 33 QYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRPIFIITEYM 86
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
NG L N+L + R + Q L + DV +EYL +H DL N L
Sbjct: 87 ANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCL 137
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
++++ V V DFGLSR + D+ + TS+ K + + PE + S+ D ++FG+L
Sbjct: 138 VNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 195
Query: 764 MLEMFT-GKRP--------TDDMFEEGLSLHK 786
M E+++ GK P T + +GL L++
Sbjct: 196 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 227
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+ +VA+K++ + + FI E + + ++ H LV++ C+ ++ E+M
Sbjct: 32 QYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRPIFIITEYM 85
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
NG L N+L + R + Q L + DV +EYL +H DL N L
Sbjct: 86 ANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCL 136
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
++++ V V DFGLSR + D+ + TS+ K + + PE + S+ D ++FG+L
Sbjct: 137 VNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 194
Query: 764 MLEMFT-GKRP--------TDDMFEEGLSLHK 786
M E+++ GK P T + +GL L++
Sbjct: 195 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 226
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 108/203 (53%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 72 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 121
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E+M NGSL+++L +K D Q ++Q + + +A+ ++YL + VH
Sbjct: 122 -MIVTEYMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGY---VHR 171
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGL+R+L D+ +T K I + +PE A + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 17/190 (8%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L ++F+ E +++++H LV++ ++ TR E ++ E+M
Sbjct: 38 TKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLY----AVVTR-EEPIYIITEYMA 91
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L E + PKL + + +A + Y+ + +H DL+ +NVL+
Sbjct: 92 KGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIER---KNYIHRDLRAANVLV 143
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
++ + DFGL+R++ DN + T+ K I + APE G + D +SFGIL+
Sbjct: 144 SESLMCKIADFGLARVIEDN--EYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILL 201
Query: 765 LEMFT-GKRP 773
E+ T GK P
Sbjct: 202 YEIVTYGKIP 211
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+ +VA+K++ + + FI E + + ++ H LV++ C+ ++ E+M
Sbjct: 39 QYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRPIFIITEYM 92
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
NG L N+L + R + Q L + DV +EYL +H DL N L
Sbjct: 93 ANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCL 143
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
++++ V V DFGLSR + D+ + TS+ K + + PE + S+ D ++FG+L
Sbjct: 144 VNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 201
Query: 764 MLEMFT-GKRP--------TDDMFEEGLSLHK 786
M E+++ GK P T + +GL L++
Sbjct: 202 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 233
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 22/199 (11%)
Query: 584 ETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
+ VA+K L + +QR + F+ E + H N+V + + TRG +V
Sbjct: 71 DVAVAIKTLKVGYTEKQR---RDFLCEASIMGQFDHPNVVHL----EGVVTRGKPV-MIV 122
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
EFM NG+L+ +L +K D Q ++Q + + +A + YL VH DL
Sbjct: 123 IEFMENGALDAFL-RKHDGQ-----FTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAA 173
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYS 759
N+L+++ +V V DFGLSR++ D+ +T+ K + + APE + ++ D +S
Sbjct: 174 RNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWS 233
Query: 760 FGILMLEMFT-GKRPTDDM 777
+GI+M E+ + G+RP DM
Sbjct: 234 YGIVMWEVMSYGERPYWDM 252
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 41 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIIIEFMTYG 94
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R +++ + L +A +++ +EYL + +H DL N L+
Sbjct: 95 NLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 146
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 147 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 245
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 41 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIIIEFMTYG 94
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R +++ + L +A +++ +EYL + +H DL N L+
Sbjct: 95 NLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 146
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 147 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 245
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 41 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 94
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R +++ + L +A +++ +EYL + +H DL N L+
Sbjct: 95 NLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 146
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 147 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 43 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 92
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E M NGSL+++L +K D Q ++Q + + +A+ ++YL + VH
Sbjct: 93 -MIVTEXMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGY---VHR 142
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGLSR+L D+ +T K I + +PE A + ++
Sbjct: 143 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 202
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 203 DVWSYGIVLWEVMSYGERPYWEM 225
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 41 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 94
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R +++ + L +A +++ +EYL + +H DL N L+
Sbjct: 95 NLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 146
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 147 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 245
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 37/229 (16%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK + + +++F+AE + +RH NLV+++ ++ +G + +V E+M
Sbjct: 37 KVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLY--IVTEYMAK 90
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
GSL ++L + R L L ++DV +EYL + + VH DL NVL+
Sbjct: 91 GSLVDYLRSR-----GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVS 142
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS--IGYVAPEYGALGEVSTHGDEYSFGIL 763
+ VA V DFGL++ + S+++ G + + APE ST D +SFGIL
Sbjct: 143 EDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGIL 194
Query: 764 MLEMFTGKR------PTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILE 806
+ E+++ R P D+ + K KM PD PA+ E
Sbjct: 195 LWEIYSFGRVPYPRIPLKDVVPR---VEKGYKMDAPDGCP----PAVYE 236
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 37/229 (16%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK + + +++F+AE + +RH NLV+++ ++ +G + +V E+M
Sbjct: 46 KVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLY--IVTEYMAK 99
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
GSL ++L + R L L ++DV +EYL + + VH DL NVL+
Sbjct: 100 GSLVDYLRSR-----GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVS 151
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS--IGYVAPEYGALGEVSTHGDEYSFGIL 763
+ VA V DFGL++ + S+++ G + + APE + ST D +SFGIL
Sbjct: 152 EDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 203
Query: 764 MLEMFTGKR------PTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILE 806
+ E+++ R P D+ + K KM PD PA+ E
Sbjct: 204 LWEIYSFGRVPYPRIPLKDVVPR---VEKGYKMDAPDGCP----PAVYE 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 107/203 (52%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 72 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 121
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E+M NGSL+++L +K D Q ++Q + + +A+ ++YL + VH
Sbjct: 122 -MIVTEYMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGY---VHR 171
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGL R+L D+ +T K I + +PE A + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 37/229 (16%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK + + +++F+AE + +RH NLV+++ ++ +G + +V E+M
Sbjct: 31 KVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLY--IVTEYMAK 84
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
GSL ++L + R L L ++DV +EYL + + VH DL NVL+
Sbjct: 85 GSLVDYLRSR-----GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVS 136
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS--IGYVAPEYGALGEVSTHGDEYSFGIL 763
+ VA V DFGL++ + S+++ G + + APE + ST D +SFGIL
Sbjct: 137 EDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 188
Query: 764 MLEMFTGKR------PTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILE 806
+ E+++ R P D+ + K KM PD PA+ E
Sbjct: 189 LWEIYSFGRVPYPRIPLKDVVPR---VEKGYKMDAPDGCP----PAVYE 230
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM
Sbjct: 45 TVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTY 98
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G+L ++L + R +++ + L +A +++ +EYL + +H DL N L+
Sbjct: 99 GNLLDYLRE-----CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG 150
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+
Sbjct: 151 ENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 208
Query: 766 EMFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
E+ T P D+ + L K +M G P++V E++
Sbjct: 209 EIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 250
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 106/203 (52%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 72 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 121
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E M NGSL+++L +K D Q ++Q + + +A+ ++YL VH
Sbjct: 122 -MIVTEXMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYL---SDMGAVHR 171
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGLSR+L D+ +T K I + +PE A + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 28/203 (13%)
Query: 583 EETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEF 635
+E +VA+K L + +QR + F+ E + H N+++ ++T +
Sbjct: 72 KEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKSKPV------- 121
Query: 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
+V E M NGSL+++L +K D Q ++Q + + +A+ ++YL + VH
Sbjct: 122 -MIVTEXMENGSLDSFL-RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGY---VHR 171
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+L+++ +V V DFGLSR+L D+ +T K I + +PE A + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 756 DEYSFGILMLEMFT-GKRPTDDM 777
D +S+GI++ E+ + G+RP +M
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.6 bits (187), Expect = 5e-14, Method: Composition-based stats.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 17/190 (8%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK L ++F+ E +++++H LV++ + E ++ EFM
Sbjct: 37 TKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVVTK-----EEPIYIITEFMA 90
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L E + PKL + + +A + Y+ + +H DL+ +NVL+
Sbjct: 91 KGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIER---KNYIHRDLRAANVLV 142
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
++ + DFGL+R++ DN + T+ K I + APE G + + +SFGIL+
Sbjct: 143 SESLMCKIADFGLARVIEDN--EYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILL 200
Query: 765 LEMFT-GKRP 773
E+ T GK P
Sbjct: 201 YEIVTYGKIP 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 27/223 (12%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 39 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIIIEFMTYG 92
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R +++ + L +A +++ +EYL + +H DL N L+
Sbjct: 93 NLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGE 144
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 145 NHLVKVADFGLSRLMTGDT--XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
Query: 767 MFT-------GKRPTD--DMFEEGLSLHKYAKMGLPDQVAEII 800
+ T G P+ ++ E+ + + G P++V E++
Sbjct: 203 IATYGMSPYPGIDPSQVYELLEKDYRMER--PEGCPEKVYELM 243
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 16/184 (8%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM
Sbjct: 38 TVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTY 91
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G+L ++L + R +++ + L +A +++ +EYL + +H DL N L+
Sbjct: 92 GNLLDYLRE-----CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG 143
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+
Sbjct: 144 ENHLVKVADFGLSRLMTGDT--XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 201
Query: 766 EMFT 769
E+ T
Sbjct: 202 EIAT 205
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 28/202 (13%)
Query: 584 ETNVAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEFK 636
E VA+K L + +QR + F+ E + H N++ ++T +
Sbjct: 50 ELPVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNIIHLEGVVTKSKPV-------- 98
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
+V E+M NGSL+ +L +K D Q ++Q + + ++ ++YL + VH D
Sbjct: 99 MIVTEYMENGSLDTFL-KKNDGQ-----FTVIQLVGMLRGISAGMKYLSDMGY---VHRD 149
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
L N+L+++ +V V DFGLSR+L D+ +T K I + APE A + ++ D
Sbjct: 150 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASD 209
Query: 757 EYSFGILMLEMFT-GKRPTDDM 777
+S+GI+M E+ + G+RP +M
Sbjct: 210 VWSYGIVMWEVVSYGERPYWEM 231
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 33/217 (15%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK + + +++F+AE + +RH NLV+++ ++ +G + +V E+M
Sbjct: 218 KVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLY--IVTEYMAK 271
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
GSL ++L + R L L ++DV +EYL + + VH DL NVL+
Sbjct: 272 GSLVDYLRSR-----GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVS 323
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS--IGYVAPEYGALGEVSTHGDEYSFGIL 763
+ VA V DFGL++ + S+++ G + + APE + ST D +SFGIL
Sbjct: 324 EDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 375
Query: 764 MLEMFTGKR------PTDDMFEEGLSLHKYAKMGLPD 794
+ E+++ R P D+ + K KM PD
Sbjct: 376 LWEIYSFGRVPYPRIPLKDVVPR---VEKGYKMDAPD 409
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 245 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 298
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H +L N L+
Sbjct: 299 NLLDYLRE-----CNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGE 350
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 351 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 408
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 409 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 449
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 287 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 340
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R ++N + L +A +++ +EYL + +H +L N L+
Sbjct: 341 NLLDYLRE-----CNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGE 392
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 393 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 450
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 451 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 491
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 112/224 (50%), Gaps = 27/224 (12%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM
Sbjct: 38 TVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTY 91
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G+L ++L + R +++ + L +A +++ +EYL + +H DL N L+
Sbjct: 92 GNLLDYLRE-----CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG 143
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+
Sbjct: 144 ENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 201
Query: 766 EMFT-------GKRPTD--DMFEEGLSLHKYAKMGLPDQVAEII 800
E+ T G P+ ++ E+ + + G P++V E++
Sbjct: 202 EIATYGMSPYPGIDPSQVYELLEKDYRMER--PEGCPEKVYELM 243
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 20/194 (10%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA-LVYEF 642
+ +VAVK++ + + F E + + + H LVK CS E+ +V E+
Sbjct: 32 QYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS------KEYPIYIVTEY 84
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
+ NG L N+L ++ L Q L + DV + +L H +H DL N
Sbjct: 85 ISNGCLLNYL------RSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNC 135
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGI 762
L+D ++ V DFG++R + D+ S+ K + + APE + S+ D ++FGI
Sbjct: 136 LVDRDLCVKVSDFGMTRYVLDDQ--YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGI 193
Query: 763 LMLEMFT-GKRPTD 775
LM E+F+ GK P D
Sbjct: 194 LMWEVFSLGKMPYD 207
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 26/200 (13%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L A + F E E L ++H+++V+ C T G +V+E+M +G
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC----TEGRPL-LMVFEYMRHG 128
Query: 647 SLENWLNQKEDE-------QNQRP-KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698
L +L + ++ P L L Q L++A VA + YL VH DL
Sbjct: 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 185
Query: 699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTH 754
N L+ +V +GDFG+SR ++ T RV G I ++ PE + +T
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDIYS-----TDYYRVGGRTMLPIRWMPPESILYRKFTTE 240
Query: 755 GDEYSFGILMLEMFT-GKRP 773
D +SFG+++ E+FT GK+P
Sbjct: 241 SDVWSFGVVLWEIFTYGKQP 260
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L + + F+ E ++ I+H NLV+++ C TR F ++ EFM G
Sbjct: 248 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYG 301
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L ++L + R +++ + L +A +++ +EYL + +H +L N L+
Sbjct: 302 NLLDYLRE-----CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGE 353
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ V DFGLSRL+ ++ T+ + K I + APE A + S D ++FG+L+ E
Sbjct: 354 NHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 411
Query: 767 MFT---GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEII 800
+ T P D+ + L K +M G P++V E++
Sbjct: 412 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 452
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 24/198 (12%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L A K F E E L +++H ++VK C D +V+E+M +G
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL-----IMVFEYMKHG 100
Query: 647 SLENWLNQKED------EQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
L +L E N +L Q L IA +A + YL VH DL
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATR 157
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHGD 756
N L+ ++ +GDFG+SR ++ T RV G I ++ PE + +T D
Sbjct: 158 NCLVGENLLVKIGDFGMSRDVYS-----TDYYRVGGHTMLPIRWMPPESIMYRKFTTESD 212
Query: 757 EYSFGILMLEMFT-GKRP 773
+S G+++ E+FT GK+P
Sbjct: 213 VWSLGVVLWEIFTYGKQP 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 26/200 (13%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L A + F E E L ++H+++V+ C T G +V+E+M +G
Sbjct: 45 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC----TEGRPL-LMVFEYMRHG 99
Query: 647 SLENWLNQKEDE-------QNQRP-KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698
L +L + ++ P L L Q L++A VA + YL VH DL
Sbjct: 100 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 156
Query: 699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTH 754
N L+ +V +GDFG+SR ++ T RV G I ++ PE + +T
Sbjct: 157 TRNCLVGQGLVVKIGDFGMSRDIYS-----TDYYRVGGRTMLPIRWMPPESILYRKFTTE 211
Query: 755 GDEYSFGILMLEMFT-GKRP 773
D +SFG+++ E+FT GK+P
Sbjct: 212 SDVWSFGVVLWEIFTYGKQP 231
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 26/200 (13%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK L A + F E E L ++H+++V+ C T G +V+E+M +G
Sbjct: 51 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC----TEGRPL-LMVFEYMRHG 105
Query: 647 SLENWLNQKEDE-------QNQRP-KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698
L +L + ++ P L L Q L++A VA + YL VH DL
Sbjct: 106 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 162
Query: 699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTH 754
N L+ +V +GDFG+SR ++ T RV G I ++ PE + +T
Sbjct: 163 TRNCLVGQGLVVKIGDFGMSRDIYS-----TDYYRVGGRTMLPIRWMPPESILYRKFTTE 217
Query: 755 GDEYSFGILMLEMFT-GKRP 773
D +SFG+++ E+FT GK+P
Sbjct: 218 SDVWSFGVVLWEIFTYGKQP 237
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 20/193 (10%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
+VA+K ++ K+FI E L + H N+VK+ +C + LV E+
Sbjct: 34 DVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP-------VCLVMEYAEG 84
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL- 704
GSL N L+ E P +S + + + YLH +++H DLKP N+LL
Sbjct: 85 GSLYNVLHGAEP----LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV 140
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
V + DFG + + QT + KGS ++APE S D +S+GI++
Sbjct: 141 AGGTVLKICDFGTACDI------QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIIL 194
Query: 765 LEMFTGKRPTDDM 777
E+ T ++P D++
Sbjct: 195 WEVITRRKPFDEI 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 20/193 (10%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
+VA+K ++ K+FI E L + H N+VK+ +C + LV E+
Sbjct: 33 DVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP-------VCLVMEYAEG 83
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL- 704
GSL N L+ E P +S + + + YLH +++H DLKP N+LL
Sbjct: 84 GSLYNVLHGAEP----LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV 139
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
V + DFG + + QT + KGS ++APE S D +S+GI++
Sbjct: 140 AGGTVLKICDFGTACDI------QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIIL 193
Query: 765 LEMFTGKRPTDDM 777
E+ T ++P D++
Sbjct: 194 WEVITRRKPFDEI 206
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 28/194 (14%)
Query: 585 TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
T VAVK + ++F+AE +++++H LVK+ + E ++ EFM
Sbjct: 207 TKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT------KEPIYIITEFMA 259
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
GSL ++L E + PKL + + +A + ++ + +H DL+ +N+L+
Sbjct: 260 KGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRNY---IHRDLRAANILV 311
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+V + DFGL+R+ K I + APE G + D +SFGIL+
Sbjct: 312 SASLVCKIADFGLARV------------GAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 359
Query: 765 LEMFT-GKRPTDDM 777
+E+ T G+ P M
Sbjct: 360 MEIVTYGRIPYPGM 373
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 26/199 (13%)
Query: 585 TNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYE 641
T VAVK+L D ++ S I+E E ++ I +H+N++ ++ +C T+ +V E
Sbjct: 61 TKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV-E 114
Query: 642 FMPNGSLENWLNQKED---EQNQRPKLNLMQRLS------IAIDVANVLEYLHHHCHTSI 692
+ G+L +L +E E + P N ++LS A VA +EYL
Sbjct: 115 YASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKC 171
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL NVL+ + V + DFGL+R +H + +T+ R+ + ++APE +
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAPE-ALFDRI 228
Query: 752 STH-GDEYSFGILMLEMFT 769
TH D +SFG+L+ E+FT
Sbjct: 229 YTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 26/199 (13%)
Query: 585 TNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYE 641
T VAVK+L D ++ S I+E E ++ I +H+N++ ++ +C T+ +V E
Sbjct: 102 TKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV-E 155
Query: 642 FMPNGSLENWLNQKED---EQNQRPKLNLMQRLS------IAIDVANVLEYLHHHCHTSI 692
+ G+L +L + E + P N ++LS A VA +EYL
Sbjct: 156 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKC 212
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL NVL+ + V + DFGL+R +H + +T+ R+ + ++APE +
Sbjct: 213 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAPE-ALFDRI 269
Query: 752 STH-GDEYSFGILMLEMFT 769
TH D +SFG+L+ E+FT
Sbjct: 270 YTHQSDVWSFGVLLWEIFT 288
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 26/199 (13%)
Query: 585 TNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYE 641
T VAVK+L D ++ S I+E E ++ I +H+N++ ++ +C T+ +V E
Sbjct: 61 TKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV-E 114
Query: 642 FMPNGSLENWLNQKED---------EQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSI 692
+ G+L +L + N +L+ +S A VA +EYL
Sbjct: 115 YASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKC 171
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL NVL+ + V + DFGL+R +H + +T+ R+ + ++APE +
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRL--PVKWMAPE-ALFDRI 228
Query: 752 STH-GDEYSFGILMLEMFT 769
TH D +SFG+L+ E+FT
Sbjct: 229 YTHQSDVWSFGVLLWEIFT 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 26/199 (13%)
Query: 585 TNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYE 641
T VAVK+L D ++ S I+E E ++ I +H+N++ ++ +C T+ +V E
Sbjct: 50 TKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV-E 103
Query: 642 FMPNGSLENWLNQKED---EQNQRPKLNLMQRLS------IAIDVANVLEYLHHHCHTSI 692
+ G+L +L + E + P N ++LS A VA +EYL
Sbjct: 104 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKC 160
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL NVL+ + V + DFGL+R +H + +T+ R+ + ++APE +
Sbjct: 161 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAPE-ALFDRI 217
Query: 752 STH-GDEYSFGILMLEMFT 769
TH D +SFG+L+ E+FT
Sbjct: 218 YTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 26/199 (13%)
Query: 585 TNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYE 641
T VAVK+L D ++ S I+E E ++ I +H+N++ ++ +C T+ +V E
Sbjct: 61 TKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV-E 114
Query: 642 FMPNGSLENWLNQKED---EQNQRPKLNLMQRLS------IAIDVANVLEYLHHHCHTSI 692
+ G+L +L + E + P N ++LS A VA +EYL
Sbjct: 115 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKC 171
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL NVL+ + V + DFGL+R +H + +T+ R+ + ++APE +
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAPE-ALFDRI 228
Query: 752 STH-GDEYSFGILMLEMFT 769
TH D +SFG+L+ E+FT
Sbjct: 229 YTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 26/199 (13%)
Query: 585 TNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYE 641
T VAVK+L D ++ S I+E E ++ I +H+N++ ++ +C T+ +V E
Sbjct: 54 TKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV-E 107
Query: 642 FMPNGSLENWLNQKED---EQNQRPKLNLMQRLS------IAIDVANVLEYLHHHCHTSI 692
+ G+L +L + E + P N ++LS A VA +EYL
Sbjct: 108 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKC 164
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL NVL+ + V + DFGL+R +H + +T+ R+ + ++APE +
Sbjct: 165 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAPE-ALFDRI 221
Query: 752 STH-GDEYSFGILMLEMFT 769
TH D +SFG+L+ E+FT
Sbjct: 222 YTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 26/199 (13%)
Query: 585 TNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYE 641
T VAVK+L D ++ S I+E E ++ I +H+N++ ++ +C T+ +V E
Sbjct: 53 TKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV-E 106
Query: 642 FMPNGSLENWLNQKED---EQNQRPKLNLMQRLS------IAIDVANVLEYLHHHCHTSI 692
+ G+L +L + E + P N ++LS A VA +EYL
Sbjct: 107 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKC 163
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL NVL+ + V + DFGL+R +H + +T+ R+ + ++APE +
Sbjct: 164 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAPE-ALFDRI 220
Query: 752 STH-GDEYSFGILMLEMFT 769
TH D +SFG+L+ E+FT
Sbjct: 221 YTHQSDVWSFGVLLWEIFT 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 26/199 (13%)
Query: 585 TNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYE 641
T VAVK+L D ++ S I+E E ++ I +H+N++ ++ +C T+ +V E
Sbjct: 61 TKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV-E 114
Query: 642 FMPNGSLENWLNQKED---------EQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSI 692
+ G+L +L + N +L+ +S A VA +EYL
Sbjct: 115 YASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKC 171
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL NVL+ + V + DFGL+R +H + +T+ R+ + ++APE +
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAPE-ALFDRI 228
Query: 752 STH-GDEYSFGILMLEMFT 769
TH D +SFG+L+ E+FT
Sbjct: 229 YTHQSDVWSFGVLLWEIFT 247
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 23/188 (12%)
Query: 587 VAVKVLDLQQRGASKS-FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK L +S + E + LR++ H +++K C + G LV E++P
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCC---EDAGAASLQLVMEYVPL 119
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
GSL ++L R + L Q L A + + YLH +H DL NVLLD
Sbjct: 120 GSLRDYLP--------RHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLD 168
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVK----GSIGYVAPEYGALGEVSTHGDEYSFG 761
N+ + +GDFGL++ + P+ RV+ + + APE + D +SFG
Sbjct: 169 NDRLVKIGDFGLAKAV----PEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFG 224
Query: 762 ILMLEMFT 769
+ + E+ T
Sbjct: 225 VTLYELLT 232
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VAVK + L + F++E ++ H N+++++ C + ++G ++ FM
Sbjct: 64 KVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L +L E + + L L +D+A +EYL + + +H DL N +
Sbjct: 124 KYGDLHTYLLYSRLETGPK-HIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCM 179
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRV-KGSIGYVAPEYGALGEVSTHGDEYSFGI 762
L ++M V DFGLS+ ++ S D R+ K + ++A E A ++ D ++FG+
Sbjct: 180 LRDDMTVCVADFGLSKKIY--SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGV 237
Query: 763 LMLEMFT 769
M E+ T
Sbjct: 238 TMWEIAT 244
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + ++ A+V ++
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL------AIVTQWC 85
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K +++ + IA A ++YLH SI+H DLK +N+
Sbjct: 86 EGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIF 136
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGDEYSF 760
L ++ +GDFGL+ + S ++ GSI ++APE + + S D Y+F
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 761 GILMLEMFTGKRPTDDM 777
GI++ E+ TG+ P ++
Sbjct: 196 GIVLYELMTGQLPYSNI 212
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 26/199 (13%)
Query: 585 TNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYE 641
T VAVK+L D ++ S I+E E ++ I +H+N++ ++ +C T+ +V E
Sbjct: 46 TKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV-E 99
Query: 642 FMPNGSLENWLNQKED---------EQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSI 692
+ G+L +L + N +L+ +S A VA +EYL
Sbjct: 100 YASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKC 156
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL NVL+ + V + DFGL+R +H + +T+ R+ + ++APE +
Sbjct: 157 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAPE-ALFDRI 213
Query: 752 STH-GDEYSFGILMLEMFT 769
TH D +SFG+L+ E+FT
Sbjct: 214 YTHQSDVWSFGVLLWEIFT 232
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+VAVK L L Q A FI E A+ S+ HRNL+++ + + +V E
Sbjct: 38 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTEL 91
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLS-IAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
P GSL + L + + L+ LS A+ VA + YL +H DL N
Sbjct: 92 APLGSLLDRLRKHQGH-------FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARN 141
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL + +GDFGL R L N K + APE S D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 762 ILMLEMFT-GKRP 773
+ + EMFT G+ P
Sbjct: 202 VTLWEMFTYGQEP 214
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 31/199 (15%)
Query: 586 NVAVKVLDLQQRGASKSFIA----ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
VAVK+L+ +Q+ S + E + L+ RH +++K+ I T + F +V E
Sbjct: 38 KVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY---QVISTPTDFF--MVME 91
Query: 642 FMPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
++ G L +++ + + +E R L Q++ A+D Y H H +VH DLKP
Sbjct: 92 YVSGGELFDYICKHGRVEEMEAR---RLFQQILSAVD------YCHRHM---VVHRDLKP 139
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY--GALGEVSTHGDE 757
NVLLD M A + DFGLS ++ D +TS GS Y APE G L D
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC----GSPNYAAPEVISGRL-YAGPEVDI 194
Query: 758 YSFGILMLEMFTGKRPTDD 776
+S G+++ + G P DD
Sbjct: 195 WSCGVILYALLCGTLPFDD 213
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+VAVK L L Q A FI E A+ S+ HRNL+++ + + +V E
Sbjct: 48 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTEL 101
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLS-IAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
P GSL + L + + L+ LS A+ VA + YL +H DL N
Sbjct: 102 APLGSLLDRLRKHQGH-------FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARN 151
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL + +GDFGL R L N K + APE S D + FG
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 762 ILMLEMFT-GKRP 773
+ + EMFT G+ P
Sbjct: 212 VTLWEMFTYGQEP 224
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+VAVK L L Q A FI E A+ S+ HRNL+++ + + +V E
Sbjct: 42 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTEL 95
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLS-IAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
P GSL + L + + L+ LS A+ VA + YL +H DL N
Sbjct: 96 APLGSLLDRLRKHQGH-------FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARN 145
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL + +GDFGL R L N K + APE S D + FG
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 762 ILMLEMFT-GKRP 773
+ + EMFT G+ P
Sbjct: 206 VTLWEMFTYGQEP 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+VAVK L L Q A FI E A+ S+ HRNL+++ + + +V E
Sbjct: 38 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTEL 91
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLS-IAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
P GSL + L + + L+ LS A+ VA + YL +H DL N
Sbjct: 92 APLGSLLDRLRKHQGH-------FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARN 141
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL + +GDFGL R L N K + APE S D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 762 ILMLEMFT-GKRP 773
+ + EMFT G+ P
Sbjct: 202 VTLWEMFTYGQEP 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 587 VAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
VAVK L Q R K E + LR++ H +++K C + +G + LV E+
Sbjct: 46 VAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCC---EDQGEKSLQLVMEY 99
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
+P GSL ++L R + L Q L A + + YLH +H +L NV
Sbjct: 100 VPLGSLRDYL--------PRHSIGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNV 148
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK----GSIGYVAPEYGALGEVSTHGDEY 758
LLDN+ + +GDFGL++ + P+ RV+ + + APE + D +
Sbjct: 149 LLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 204
Query: 759 SFGILMLEMFT 769
SFG+ + E+ T
Sbjct: 205 SFGVTLYELLT 215
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+VAVK L L Q A FI E A+ S+ HRNL+++ + + +V E
Sbjct: 38 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTEL 91
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLS-IAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
P GSL + L + + L+ LS A+ VA + YL +H DL N
Sbjct: 92 APLGSLLDRLRKHQGH-------FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARN 141
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL + +GDFGL R L N K + APE S D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 762 ILMLEMFT-GKRP 773
+ + EMFT G+ P
Sbjct: 202 VTLWEMFTYGQEP 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+VAVK L L Q A FI E A+ S+ HRNL+++ + + +V E
Sbjct: 48 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTEL 101
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLS-IAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
P GSL + L + + L+ LS A+ VA + YL +H DL N
Sbjct: 102 APLGSLLDRLRKHQGH-------FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARN 151
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL + +GDFGL R L N K + APE S D + FG
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 762 ILMLEMFT-GKRP 773
+ + EMFT G+ P
Sbjct: 212 VTLWEMFTYGQEP 224
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 587 VAVKVLDL----QQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
VAVK L Q R K E + LR++ H +++K C + +G + LV E+
Sbjct: 46 VAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCC---EDQGEKSLQLVMEY 99
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
+P GSL ++L R + L Q L A + + YLH +H +L NV
Sbjct: 100 VPLGSLRDYL--------PRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNV 148
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK----GSIGYVAPEYGALGEVSTHGDEY 758
LLDN+ + +GDFGL++ + P+ RV+ + + APE + D +
Sbjct: 149 LLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 204
Query: 759 SFGILMLEMFT 769
SFG+ + E+ T
Sbjct: 205 SFGVTLYELLT 215
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 21/197 (10%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + + A+V ++
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWC 85
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K +++ + IA A ++YLH SI+H DLK +N+
Sbjct: 86 EGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIF 136
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGDEYSF 760
L ++ +GDFGL+ + S ++ GSI ++APE + + S D Y+F
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 761 GILMLEMFTGKRPTDDM 777
GI++ E+ TG+ P ++
Sbjct: 196 GIVLYELMTGQLPYSNI 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 21/197 (10%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + + A+V ++
Sbjct: 34 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWC 87
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K +++ + IA A ++YLH SI+H DLK +N+
Sbjct: 88 EGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIF 138
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGDEYSF 760
L ++ +GDFGL+ + S ++ GSI ++APE + + S D Y+F
Sbjct: 139 LHEDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 197
Query: 761 GILMLEMFTGKRPTDDM 777
GI++ E+ TG+ P ++
Sbjct: 198 GIVLYELMTGQLPYSNI 214
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L + + +F E LR RH N++ + + + A+V ++
Sbjct: 60 DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL------AIVTQWC 113
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL L+ +E K + Q + IA A ++YLH +I+H D+K +N+
Sbjct: 114 EGSSLYKHLHVQET------KFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIF 164
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGDEYSF 760
L + +GDFGL+ + S Q + GS+ ++APE + + S D YS+
Sbjct: 165 LHEGLTVKIGDFGLATVKSRWSGSQ-QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSY 223
Query: 761 GILMLEMFTGKRP 773
GI++ E+ TG+ P
Sbjct: 224 GIVLYELMTGELP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + + A+V ++
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWC 90
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K +++ + IA A ++YLH SI+H DLK +N+
Sbjct: 91 EGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIF 141
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGDEYSF 760
L ++ +GDFGL+ + S ++ GSI ++APE + + S D Y+F
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 761 GILMLEMFTGKRP 773
GI++ E+ TG+ P
Sbjct: 201 GIVLYELMTGQLP 213
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+VAVK L L Q A FI E A+ S+ HRNL+++ + + +V E
Sbjct: 42 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTEL 95
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLS-IAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
P GSL + L + + L+ LS A+ VA + YL +H DL N
Sbjct: 96 APLGSLLDRLRKHQGH-------FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARN 145
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL + +GDFGL R L N K + APE S D + FG
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 762 ILMLEMFT-GKRP 773
+ + EMFT G+ P
Sbjct: 206 VTLWEMFTYGQEP 218
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + + A+V ++
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWC 90
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K +++ + IA A ++YLH SI+H DLK +N+
Sbjct: 91 EGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIF 141
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGDEYSF 760
L ++ +GDFGL+ + S ++ GSI ++APE + + S D Y+F
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 761 GILMLEMFTGKRP 773
GI++ E+ TG+ P
Sbjct: 201 GIVLYELMTGQLP 213
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 29/201 (14%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + + A+V ++
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWC 85
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K +++ + IA A ++YLH SI+H DLK +N+
Sbjct: 86 EGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIF 136
Query: 704 LDNEMVAHVGDFGL----SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGD 756
L ++ +GDFGL SR + +Q S GSI ++APE + + S D
Sbjct: 137 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLS-----GSILWMAPEVIRMQDKNPYSFQSD 191
Query: 757 EYSFGILMLEMFTGKRPTDDM 777
Y+FGI++ E+ TG+ P ++
Sbjct: 192 VYAFGIVLYELMTGQLPYSNI 212
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + + A+V ++
Sbjct: 59 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWC 112
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K +++ + IA A ++YLH SI+H DLK +N+
Sbjct: 113 EGSSLYHHLHIIE------TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIF 163
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGDEYSF 760
L ++ +GDFGL+ + S ++ GSI ++APE + + S D Y+F
Sbjct: 164 LHEDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 222
Query: 761 GILMLEMFTGKRP 773
GI++ E+ TG+ P
Sbjct: 223 GIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 21/193 (10%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + + A+V ++
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWC 113
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K +++ + IA A ++YLH SI+H DLK +N+
Sbjct: 114 EGSSLYHHLHIIE------TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIF 164
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGDEYSF 760
L ++ +GDFGL+ + S ++ GSI ++APE + + S D Y+F
Sbjct: 165 LHEDLTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 761 GILMLEMFTGKRP 773
GI++ E+ TG+ P
Sbjct: 224 GIVLYELMTGQLP 236
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 31/199 (15%)
Query: 586 NVAVKVLDLQQRGASKSFIA----ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
VAVK+L+ +Q+ S + E + L+ RH +++K+ I T + F +V E
Sbjct: 43 KVAVKILN-RQKIRSLDVVGKIRREIQNLKLFRHPHIIKLY---QVISTPSDIF--MVME 96
Query: 642 FMPNGSLENWL--NQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
++ G L +++ N + DE+ R L Q++ +D Y H H +VH DLKP
Sbjct: 97 YVSGGELFDYICKNGRLDEKESR---RLFQQILSGVD------YCHRHM---VVHRDLKP 144
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY--GALGEVSTHGDE 757
NVLLD M A + DFGLS ++ D + S GS Y APE G L D
Sbjct: 145 ENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC----GSPNYAAPEVISGRL-YAGPEVDI 199
Query: 758 YSFGILMLEMFTGKRPTDD 776
+S G+++ + G P DD
Sbjct: 200 WSSGVILYALLCGTLPFDD 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 37/182 (20%)
Query: 606 ECEALRSIRHRNLVK---IITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQK----EDE 658
E L+ +RH +++K +IT+ + I +V E+ G L +++ +K EDE
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDI--------VMVIEYA-GGELFDYIVEKKRMTEDE 109
Query: 659 QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS 718
+ Q++ AI EY H H IVH DLKP N+LLD+ + + DFGLS
Sbjct: 110 GRR-----FFQQIICAI------EYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLS 155
Query: 719 RLLHDNSPDQTSTSRVKGSIGYVAPEY--GALGEVSTHGDEYSFGILMLEMFTGKRPTDD 776
++ D + +TS GS Y APE G L D +S GI++ M G+ P DD
Sbjct: 156 NIMTDGNFLKTSC----GSPNYAAPEVINGKL-YAGPEVDVWSCGIVLYVMLVGRLPFDD 210
Query: 777 MF 778
F
Sbjct: 211 EF 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 29/197 (14%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + + A+V ++
Sbjct: 52 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWC 105
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K +++ + IA A ++YLH SI+H DLK +N+
Sbjct: 106 EGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIF 156
Query: 704 LDNEMVAHVGDFGL----SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGD 756
L ++ +GDFGL SR + +Q S GSI ++APE + + S D
Sbjct: 157 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLS-----GSILWMAPEVIRMQDKNPYSFQSD 211
Query: 757 EYSFGILMLEMFTGKRP 773
Y+FGI++ E+ TG+ P
Sbjct: 212 VYAFGIVLYELMTGQLP 228
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 41/280 (14%)
Query: 583 EETNVAVKVL--DLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
+ +VAVKVL DL + + F E + ++ H +V + + + +T +V
Sbjct: 36 DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIV 94
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
E++ +L + ++ E PK + + + D L + H + I+H D+KP
Sbjct: 95 MEYVDGVTLRDIVHT---EGPMTPK----RAIEVIADACQALNFSHQN---GIIHRDVKP 144
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYS 759
+N+++ V DFG++R + D+ T T+ V G+ Y++PE V D YS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 760 FGILMLEMFTGKRP-TDDMFEEGLSLHKYAKMGLPDQVA------EIIDPAILEEAL--E 810
G ++ E+ TG+ P T D PD VA + I P+ E L +
Sbjct: 205 LGCVLYEVLTGEPPFTGDS---------------PDSVAYQHVREDPIPPSARHEGLSAD 249
Query: 811 IQAGIVKELQPNLRAKFH---EIQVSILRVGILCSEELPR 847
+ A ++K L N ++ E++ ++RV E P+
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK 289
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 29/197 (14%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + + A+V ++
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWC 113
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K +++ + IA A ++YLH SI+H DLK +N+
Sbjct: 114 EGSSLYHHLHIIE------TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIF 164
Query: 704 LDNEMVAHVGDFGL----SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGD 756
L ++ +GDFGL SR + +Q S GSI ++APE + + S D
Sbjct: 165 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLS-----GSILWMAPEVIRMQDKNPYSFQSD 219
Query: 757 EYSFGILMLEMFTGKRP 773
Y+FGI++ E+ TG+ P
Sbjct: 220 VYAFGIVLYELMTGQLP 236
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 31/204 (15%)
Query: 583 EETNVAVKVLDL-QQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ +VA+KVL ++ ++ + E + + + + +V++I C + E LV E
Sbjct: 36 KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVME 89
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-------HTSIVH 694
G L +L K +E I V+NV E LH + VH
Sbjct: 90 MAGGGPLHKFLVGKREE----------------IPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH 754
DL NVLL N A + DFGLS+ L + T+ S K + + APE + S+
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 755 GDEYSFGILMLEMFT-GKRPTDDM 777
D +S+G+ M E + G++P M
Sbjct: 194 SDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 34/220 (15%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + + A+V ++
Sbjct: 36 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWC 89
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K + + + IA A ++YLH SI+H DLK +N+
Sbjct: 90 EGSSLYHHLHASE------TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIF 140
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGDEYSF 760
L + +GDFGL+ + S ++ GSI ++APE + + S D Y+F
Sbjct: 141 LHEDNTVKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 199
Query: 761 GILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEII 800
GI++ E+ TG+ P Y+ + DQ+ E++
Sbjct: 200 GIVLYELMTGQLP-------------YSNINNRDQIIEMV 226
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E E LR++ H ++VK C + +G + LV E++P GSL ++L R +
Sbjct: 61 EIEILRTLYHEHIVKYKGCC---EDQGEKSVQLVMEYVPLGSLRDYLP--------RHCV 109
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNS 725
L Q L A + + YLH +H L NVLLDN+ + +GDFGL++ +
Sbjct: 110 GLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV---- 162
Query: 726 PDQTSTSRVK----GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT 769
P+ RV+ + + APE + D +SFG+ + E+ T
Sbjct: 163 PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 42/224 (18%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + ++ A+V ++
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL------AIVTQWC 101
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K + + + IA A ++YLH SI+H DLK +N+
Sbjct: 102 EGSSLYHHLHASE------TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIF 152
Query: 704 LDNEMVAHVGDFGL----SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGD 756
L + +GDFGL SR + +Q S GSI ++APE + + S D
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLS-----GSILWMAPEVIRMQDSNPYSFQSD 207
Query: 757 EYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEII 800
Y+FGI++ E+ TG+ P Y+ + DQ+ E++
Sbjct: 208 VYAFGIVLYELMTGQLP-------------YSNINNRDQIIEMV 238
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 26/200 (13%)
Query: 582 TEETNVAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL 638
T VA+K+++ L + E LR +RH +++K+ S D +
Sbjct: 31 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE-----IIM 85
Query: 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698
V E+ N L +++ Q++ Q + Q +S +EY H H IVH DLK
Sbjct: 86 VIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIIS-------AVEYCHRH---KIVHRDLK 134
Query: 699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY--GALGEVSTHGD 756
P N+LLD + + DFGLS ++ D + +TS GS Y APE G L D
Sbjct: 135 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKL-YAGPEVD 189
Query: 757 EYSFGILMLEMFTGKRPTDD 776
+S G+++ M + P DD
Sbjct: 190 VWSCGVILYVMLCRRLPFDD 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 26/200 (13%)
Query: 582 TEETNVAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL 638
T VA+K+++ L + E LR +RH +++K+ S D +
Sbjct: 27 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE-----IIM 81
Query: 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698
V E+ N L +++ Q++ Q + Q +S +EY H H IVH DLK
Sbjct: 82 VIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIIS-------AVEYCHRH---KIVHRDLK 130
Query: 699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY--GALGEVSTHGD 756
P N+LLD + + DFGLS ++ D + +TS GS Y APE G L D
Sbjct: 131 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKL-YAGPEVD 185
Query: 757 EYSFGILMLEMFTGKRPTDD 776
+S G+++ M + P DD
Sbjct: 186 VWSCGVILYVMLCRRLPFDD 205
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 31/199 (15%)
Query: 586 NVAVKVLDLQQRGASKSFIA----ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
VAVK+L+ +Q+ S + E + L+ RH +++K+ I T + F +V E
Sbjct: 38 KVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY---QVISTPTDFF--MVME 91
Query: 642 FMPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
++ G L +++ + + +E R L Q++ A+D Y H H +VH DLKP
Sbjct: 92 YVSGGELFDYICKHGRVEEMEAR---RLFQQILSAVD------YCHRHM---VVHRDLKP 139
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY--GALGEVSTHGDE 757
NVLLD M A + DFGLS ++ D + S GS Y APE G L D
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC----GSPNYAAPEVISGRL-YAGPEVDI 194
Query: 758 YSFGILMLEMFTGKRPTDD 776
+S G+++ + G P DD
Sbjct: 195 WSCGVILYALLCGTLPFDD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 26/200 (13%)
Query: 582 TEETNVAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL 638
T VA+K+++ L + E LR +RH +++K+ S D +
Sbjct: 37 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE-----IIM 91
Query: 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698
V E+ N L +++ Q++ Q + Q +S +EY H H IVH DLK
Sbjct: 92 VIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIIS-------AVEYCHRH---KIVHRDLK 140
Query: 699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY--GALGEVSTHGD 756
P N+LLD + + DFGLS ++ D + +TS GS Y APE G L D
Sbjct: 141 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKL-YAGPEVD 195
Query: 757 EYSFGILMLEMFTGKRPTDD 776
+S G+++ M + P DD
Sbjct: 196 VWSCGVILYVMLCRRLPFDD 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 26/200 (13%)
Query: 582 TEETNVAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL 638
T VA+K+++ L + E LR +RH +++K+ S D +
Sbjct: 36 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE-----IIM 90
Query: 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698
V E+ N L +++ Q++ Q + Q +S +EY H H IVH DLK
Sbjct: 91 VIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIIS-------AVEYCHRH---KIVHRDLK 139
Query: 699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY--GALGEVSTHGD 756
P N+LLD + + DFGLS ++ D + +TS GS Y APE G L D
Sbjct: 140 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKL-YAGPEVD 194
Query: 757 EYSFGILMLEMFTGKRPTDD 776
+S G+++ M + P DD
Sbjct: 195 VWSCGVILYVMLCRRLPFDD 214
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E E LR++ H ++VK C + +G + LV E++P GSL ++L R +
Sbjct: 60 EIEILRTLYHEHIVKYKGCC---EDQGEKSVQLVMEYVPLGSLRDYL--------PRHCV 108
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNS 725
L Q L A + + YLH + +H L NVLLDN+ + +GDFGL++ +
Sbjct: 109 GLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAV---- 161
Query: 726 PDQTSTSRVK----GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT 769
P+ RV+ + + APE + D +SFG+ + E+ T
Sbjct: 162 PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 586 NVAVKVL--DLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+VAVKVL DL + + F E + ++ H +V + + + +T +V E+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEA-ETPAGPLPYIVMEY 97
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
+ +L + ++ E PK + + + D L + H + I+H D+KP+N+
Sbjct: 98 VDGVTLRDIVHT---EGPMTPK----RAIEVIADACQALNFSHQN---GIIHRDVKPANI 147
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGI 762
++ V DFG++R + D+ T T+ V G+ Y++PE V D YS G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 763 LMLEMFTGKRP 773
++ E+ TG+ P
Sbjct: 208 VLYEVLTGEPP 218
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 42/224 (18%)
Query: 586 NVAVKVLDLQQRGASK--SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+VAVK+L++ + +F E LR RH N++ + + A+V ++
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWC 101
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
SL + L+ E K + + + IA A ++YLH SI+H DLK +N+
Sbjct: 102 EGSSLYHHLHASE------TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIF 152
Query: 704 LDNEMVAHVGDFGL----SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGD 756
L + +GDFGL SR + +Q S GSI ++APE + + S D
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLS-----GSILWMAPEVIRMQDSNPYSFQSD 207
Query: 757 EYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEII 800
Y+FGI++ E+ TG+ P Y+ + DQ+ E++
Sbjct: 208 VYAFGIVLYELMTGQLP-------------YSNINNRDQIIEMV 238
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 586 NVAVKVL--DLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+VAVKVL DL + + F E + ++ H +V + + + +T +V E+
Sbjct: 56 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEY 114
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
+ +L + ++ E PK + + + D L + H + I+H D+KP+N+
Sbjct: 115 VDGVTLRDIVHT---EGPMTPK----RAIEVIADACQALNFSHQN---GIIHRDVKPANI 164
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGI 762
++ V DFG++R + D+ T T+ V G+ Y++PE V D YS G
Sbjct: 165 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 224
Query: 763 LMLEMFTGKRP 773
++ E+ TG+ P
Sbjct: 225 VLYEVLTGEPP 235
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 19/194 (9%)
Query: 603 FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQR 662
+AE ++ + + +V++I C + E LV E G L +L Q +++
Sbjct: 59 LLAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 663 PKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLH 722
+ L+ ++S+ ++YL ++ VH DL NVLL + A + DFGLS+ L
Sbjct: 113 -IIELVHQVSMG------MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM--FE 779
+ + + K + + APE + S+ D +SFG+LM E F+ G++P M E
Sbjct: 163 ADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 780 EGLSLHKYAKMGLP 793
L K +MG P
Sbjct: 223 VTAMLEKGERMGCP 236
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 24/192 (12%)
Query: 587 VAVKVLDLQQRGAS---KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VA+K + + R K F E + H+N+V +I +D + + LV E++
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI----DVDEEDDCY-YLVMEYI 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVAN-VLEYLHHHCHTSIVHCDLKPSNV 702
+L ++ ++ P + AI+ N +L+ + H IVH D+KP N+
Sbjct: 94 EGPTLSEYI------ESHGP-----LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNI 142
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEYSFG 761
L+D+ + DFG+++ L + S T T+ V G++ Y +PE A GE + D YS G
Sbjct: 143 LIDSNKTLKIFDFGIAKALSETS--LTQTNHVLGTVQYFSPE-QAKGEATDECTDIYSIG 199
Query: 762 ILMLEMFTGKRP 773
I++ EM G+ P
Sbjct: 200 IVLYEMLVGEPP 211
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 586 NVAVKVL--DLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+VAVKVL DL + + F E + ++ H +V + + + +T +V E+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEY 97
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
+ +L + ++ E PK + + + D L + H + I+H D+KP+N+
Sbjct: 98 VDGVTLRDIVHT---EGPMTPK----RAIEVIADACQALNFSHQN---GIIHRDVKPANI 147
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGI 762
++ V DFG++R + D+ T T+ V G+ Y++PE V D YS G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 763 LMLEMFTGKRP 773
++ E+ TG+ P
Sbjct: 208 VLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 583 EETNVAVKVL--DLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
+ +VAVKVL DL + + F E + ++ H +V + + + +T +V
Sbjct: 36 DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIV 94
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
E++ +L + ++ E PK + + + D L + H + I+H D+KP
Sbjct: 95 MEYVDGVTLRDIVHT---EGPMTPK----RAIEVIADACQALNFSHQN---GIIHRDVKP 144
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYS 759
+N+++ V DFG++R + D+ T T+ V G+ Y++PE V D YS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 760 FGILMLEMFTGKRP 773
G ++ E+ TG+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 19/194 (9%)
Query: 603 FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQR 662
+AE ++ + + +V++I C + E LV E G L +L Q +++
Sbjct: 53 LLAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKN 106
Query: 663 PKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLH 722
+ L+ ++S+ ++YL ++ VH DL NVLL + A + DFGLS+ L
Sbjct: 107 -IIELVHQVSMG------MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 156
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM--FE 779
+ + + K + + APE + S+ D +SFG+LM E F+ G++P M E
Sbjct: 157 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
Query: 780 EGLSLHKYAKMGLP 793
L K +MG P
Sbjct: 217 VTAMLEKGERMGCP 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 19/194 (9%)
Query: 603 FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQR 662
+AE ++ + + +V++I C + E LV E G L +L Q +++
Sbjct: 55 LLAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKN 108
Query: 663 PKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLH 722
+ L+ ++S+ ++YL ++ VH DL NVLL + A + DFGLS+ L
Sbjct: 109 -IIELVHQVSMG------MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 158
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM--FE 779
+ + + K + + APE + S+ D +SFG+LM E F+ G++P M E
Sbjct: 159 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
Query: 780 EGLSLHKYAKMGLP 793
L K +MG P
Sbjct: 219 VTAMLEKGERMGCP 232
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 19/194 (9%)
Query: 603 FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQR 662
+AE ++ + + +V++I C + E LV E G L +L Q +++
Sbjct: 59 LLAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 663 PKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLH 722
+ L+ ++S+ ++YL ++ VH DL NVLL + A + DFGLS+ L
Sbjct: 113 -IIELVHQVSMG------MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM--FE 779
+ + + K + + APE + S+ D +SFG+LM E F+ G++P M E
Sbjct: 163 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 780 EGLSLHKYAKMGLP 793
L K +MG P
Sbjct: 223 VTAMLEKGERMGCP 236
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 21/190 (11%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E + L + H +VK+ + T G + L+ +F+ G L L+++ + K
Sbjct: 76 ERDILVEVNHPFIVKL---HYAFQTEGKLY--LILDFLRGGDLFTRLSKEVMFTEEDVKF 130
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDN 724
L + L++A+D H H+ I++ DLKP N+LLD E + DFGLS+ D+
Sbjct: 131 YLAE-LALALD----------HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179
Query: 725 SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM-FEEGLS 783
S G++ Y+APE + D +SFG+LM EM TG P +E ++
Sbjct: 180 EKKAYSFC---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 236
Query: 784 LHKYAKMGLP 793
+ AK+G+P
Sbjct: 237 MILKAKLGMP 246
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 21/190 (11%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E + L + H +VK+ + T G + L+ +F+ G L L+++ + K
Sbjct: 77 ERDILVEVNHPFIVKL---HYAFQTEGKLY--LILDFLRGGDLFTRLSKEVMFTEEDVKF 131
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDN 724
L + L++A+D H H+ I++ DLKP N+LLD E + DFGLS+ D+
Sbjct: 132 YLAE-LALALD----------HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 180
Query: 725 SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM-FEEGLS 783
S G++ Y+APE + D +SFG+LM EM TG P +E ++
Sbjct: 181 EKKAYSFC---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 237
Query: 784 LHKYAKMGLP 793
+ AK+G+P
Sbjct: 238 MILKAKLGMP 247
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 43/263 (16%)
Query: 584 ETNVAVKVLD----LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
ET VAVK ++ L++R F+ E ++ ++V+++ S + +V
Sbjct: 47 ETRVAVKTVNESASLRER---IEFLNEASVMKGFTCHHVVRLLGVVSK-----GQPTLVV 98
Query: 640 YEFMPNGSLENWLN--QKEDEQNQ-RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
E M +G L+++L + E E N RP L + + +A ++A+ + YL+ VH D
Sbjct: 99 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRD 155
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVS 752
L N ++ ++ +GDFG++R + +T R G + ++APE G +
Sbjct: 156 LAARNCMVAHDFTVKIGDFGMTRDIX-----ETDXXRKGGKGLLPVRWMAPESLKDGVFT 210
Query: 753 THGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEIIDPAILEE 807
T D +SFG+++ E+ + ++P +GLS + K G DQ P E
Sbjct: 211 TSSDMWSFGVVLWEITSLAEQPY-----QGLSNEQVLKFVMDGGYLDQ------PDNCPE 259
Query: 808 ALEIQAGIVKELQPNLRAKFHEI 830
+ + + PN+R F EI
Sbjct: 260 RVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 77 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 131
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L E P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 132 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 188
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N ++ + +GDFG++R ++ +T R G + +++PE G +T+
Sbjct: 189 RNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 243
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 244 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 302
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 303 PKMRPSFLEIISSIKEEMEPGFR 325
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 98/195 (50%), Gaps = 27/195 (13%)
Query: 584 ETNVAVKVLD----LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
ET VAVK ++ L++R F+ E ++ ++V+++ S + +V
Sbjct: 47 ETRVAVKTVNESASLRER---IEFLNEASVMKGFTCHHVVRLLGVVSK-----GQPTLVV 98
Query: 640 YEFMPNGSLENWLN--QKEDEQNQ-RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
E M +G L+++L + E E N RP L + + +A ++A+ + YL+ VH D
Sbjct: 99 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRD 155
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVS 752
L N ++ ++ +GDFG++R ++ +T+ R G + ++APE G +
Sbjct: 156 LAARNCMVAHDFTVKIGDFGMTRDIY-----ETAYYRKGGKGLLPVRWMAPESLKDGVFT 210
Query: 753 THGDEYSFGILMLEM 767
T D +SFG+++ E+
Sbjct: 211 TSSDMWSFGVVLWEI 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 35/249 (14%)
Query: 582 TEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
+ + +A+K + + S+ E + ++H+N+V+ + S S N F + E
Sbjct: 31 SNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-----NGFIKIFME 85
Query: 642 FMPNGSLE-----NWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
+P GSL W K++EQ +I +LE L + IVH D
Sbjct: 86 QVPGGSLSALLRSKWGPLKDNEQ------------TIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 697 LKPSNVLLDN-EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE--VST 753
+K NVL++ V + DFG S+ L +P T G++ Y+APE G
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGINP---CTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 754 HGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQA 813
D +S G ++EM TGK P ++ E ++ K + ++ E + + E +A
Sbjct: 191 AADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESM-------SAEAKA 243
Query: 814 GIVKELQPN 822
I+K +P+
Sbjct: 244 FILKCFEPD 252
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 602 SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQ 661
+AE ++ + + +V++I C + E LV E G L +L Q +++
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDK 117
Query: 662 RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLL 721
+ L+ ++S+ ++YL ++ VH DL NVLL + A + DFGLS+ L
Sbjct: 118 NI-IELVHQVSMG------MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
Query: 722 HDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM--F 778
+ + + K + + APE + S+ D +SFG+LM E F+ G++P M
Sbjct: 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 227
Query: 779 EEGLSLHKYAKMGLP 793
E L K +MG P
Sbjct: 228 EVTAMLEKGERMGCP 242
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 42 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 96
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L E P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 97 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 153
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N ++ + +GDFG++R ++ +T R G + +++PE G +T+
Sbjct: 154 RNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 208
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 209 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 267
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 268 PKMRPSFLEIISSIKEEMEPGFR 290
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 21/190 (11%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E + L + H +VK+ + T G + L+ +F+ G L L+++ + K
Sbjct: 76 ERDILVEVNHPFIVKL---HYAFQTEGKLY--LILDFLRGGDLFTRLSKEVMFTEEDVKF 130
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDN 724
L + L++A+D H H+ I++ DLKP N+LLD E + DFGLS+ D+
Sbjct: 131 YLAE-LALALD----------HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179
Query: 725 SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM-FEEGLS 783
S G++ Y+APE + D +SFG+LM EM TG P +E ++
Sbjct: 180 EKKAYSFC---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 236
Query: 784 LHKYAKMGLP 793
+ AK+G+P
Sbjct: 237 MILKAKLGMP 246
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 49 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 103
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L E P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 104 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 160
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N ++ + +GDFG++R ++ +T R G + +++PE G +T+
Sbjct: 161 RNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 215
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 216 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 274
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 275 PKMRPSFLEIISSIKEEMEPGFR 297
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 46 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 100
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L E P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 101 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 157
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N ++ + +GDFG++R ++ +T R G + +++PE G +T+
Sbjct: 158 RNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 212
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 213 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 271
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 272 PKMRPSFLEIISSIKEEMEPGFR 294
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 23/251 (9%)
Query: 587 VAVKVLDLQQRGASK-SFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK+L K + ++E + + + +H N+V ++ +C T G ++ E+
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC----THGGPV-LVITEYCC 125
Query: 645 NGSLENWLNQKE----DEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
G L N+L +K D+++ RP L L L + VA + +L + +H D+
Sbjct: 126 YGDLLNFLRRKAEADLDKEDGRP-LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAAR 181
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
NVLL N VA +GDFGL+R + ++S + + + ++APE + D +S+
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 240
Query: 761 GILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKEL 819
GIL+ E+F+ G P + +K K G ++ PA + + L
Sbjct: 241 GILLWEIFSLGLNPYPGILVNS-KFYKLVKDGY-----QMAQPAFAPKNIYSIMQACWAL 294
Query: 820 QPNLRAKFHEI 830
+P R F +I
Sbjct: 295 EPTHRPTFQQI 305
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 48 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 102
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L E P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 103 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 159
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N ++ + +GDFG++R ++ +T R G + +++PE G +T+
Sbjct: 160 RNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 214
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 215 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 273
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 274 PKMRPSFLEIISSIKEEMEPGFR 296
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 48 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 102
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L E P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 103 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 159
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N ++ + +GDFG++R ++ +T R G + +++PE G +T+
Sbjct: 160 RNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 214
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 215 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 273
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 274 PKMRPSFLEIISSIKEEMEPGFR 296
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 31/204 (15%)
Query: 583 EETNVAVKVLDL-QQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ +VA+KVL ++ ++ + E + + + + +V++I C + E LV E
Sbjct: 362 KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVME 415
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-------HTSIVH 694
G L +L K +E I V+NV E LH + VH
Sbjct: 416 MAGGGPLHKFLVGKREE----------------IPVSNVAELLHQVSMGMKYLEEKNFVH 459
Query: 695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH 754
+L NVLL N A + DFGLS+ L + T+ S K + + APE + S+
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 755 GDEYSFGILMLEMFT-GKRPTDDM 777
D +S+G+ M E + G++P M
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKKM 543
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 37/250 (14%)
Query: 582 TEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
+ + +A+K + + S+ E + ++H+N+V+ + S S N F + E
Sbjct: 45 SNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-----NGFIKIFME 99
Query: 642 FMPNGSLE-----NWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
+P GSL W K++EQ +I +LE L + IVH D
Sbjct: 100 QVPGGSLSALLRSKWGPLKDNEQ------------TIGFYTKQILEGLKYLHDNQIVHRD 147
Query: 697 LKPSNVLLDN-EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE---YGALGEVS 752
+K NVL++ V + DFG S+ L +P T G++ Y+APE G G
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLAGINP---CTETFTGTLQYMAPEIIDKGPRG-YG 203
Query: 753 THGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQ 812
D +S G ++EM TGK P ++ E ++ K + ++ E + + E +
Sbjct: 204 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESM-------SAEAK 256
Query: 813 AGIVKELQPN 822
A I+K +P+
Sbjct: 257 AFILKCFEPD 266
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 91/218 (41%), Gaps = 43/218 (19%)
Query: 583 EETNVAVKVLDLQQRGASKSFIAECEALRS--IRHRNLVKIITSCSSIDTRGNEFKALVY 640
+E VAVKV R ++FI E R + H N+ + I + G LV
Sbjct: 35 DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM 91
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLH------HHCHTSIVH 694
E+ PNGSL +L+ + + +A V L YLH H +I H
Sbjct: 92 EYYPNGSLXKYLSLHTS--------DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISH 143
Query: 695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDN------SPDQTSTSRVKGSIGYVAPEY--- 745
DL NVL+ N+ + DFGLS L N D + S V G+I Y+APE
Sbjct: 144 RDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV-GTIRYMAPEVLEG 202
Query: 746 --------GALGEVSTHGDEYSFGILMLEMFTGKRPTD 775
AL +V D Y+ G++ E+F R TD
Sbjct: 203 AVNLRDXESALKQV----DMYALGLIYWEIFM--RCTD 234
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 584 ETNVAVKVLD----LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
ET VAVK ++ L++R F+ E ++ ++V+++ S + +V
Sbjct: 46 ETRVAVKTVNESASLRER---IEFLNEASVMKGFTCHHVVRLLGVVSK-----GQPTLVV 97
Query: 640 YEFMPNGSLENWLN--QKEDEQNQ-RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
E M +G L+++L + E E N RP L + + +A ++A+ + YL+ VH D
Sbjct: 98 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRD 154
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVS 752
L N ++ ++ +GDFG++R ++ +T R G + ++APE G +
Sbjct: 155 LAARNCMVAHDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMAPESLKDGVFT 209
Query: 753 THGDEYSFGILMLEM 767
T D +SFG+++ E+
Sbjct: 210 TSSDMWSFGVVLWEI 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 584 ETNVAVKVLD----LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
ET VAVK ++ L++R F+ E ++ ++V+++ S + +V
Sbjct: 47 ETRVAVKTVNESASLRER---IEFLNEASVMKGFTCHHVVRLLGVVSK-----GQPTLVV 98
Query: 640 YEFMPNGSLENWLN--QKEDEQNQ-RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
E M +G L+++L + E E N RP L + + +A ++A+ + YL+ VH D
Sbjct: 99 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRD 155
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVS 752
L N ++ ++ +GDFG++R ++ +T R G + ++APE G +
Sbjct: 156 LAARNCMVAHDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMAPESLKDGVFT 210
Query: 753 THGDEYSFGILMLEM 767
T D +SFG+++ E+
Sbjct: 211 TSSDMWSFGVVLWEI 225
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 25/180 (13%)
Query: 599 ASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDE 658
++F+ E + +R + H N++K I D R N + E++ G+L + +
Sbjct: 50 TQRTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLN----FITEYIKGGTLRGIIKSMD-- 102
Query: 659 QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS 718
+Q P QR+S A D+A+ + YLH +I+H DL N L+ V DFGL+
Sbjct: 103 -SQYP---WSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLA 155
Query: 719 RLLHD-----------NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEM 767
RL+ D PD+ V G+ ++APE D +SFGI++ E+
Sbjct: 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 14/194 (7%)
Query: 583 EETNVAVKVL--DLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
+ +VAVKVL DL + + F E + ++ H +V + + + +T +V
Sbjct: 36 DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIV 94
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
E++ +L + ++ E PK + + + D L + H + I+H D+KP
Sbjct: 95 MEYVDGVTLRDIVHT---EGPMTPK----RAIEVIADACQALNFSHQN---GIIHRDVKP 144
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYS 759
+N+L+ V DFG++R + D+ T+ V G+ Y++PE V D YS
Sbjct: 145 ANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 760 FGILMLEMFTGKRP 773
G ++ E+ TG+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 602 SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQ 661
+AE ++ + + +V++I C + E LV E G L +L Q +++
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDK 127
Query: 662 RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLL 721
+ L+ ++S+ ++YL ++ VH DL NVLL + A + DFGLS+ L
Sbjct: 128 NI-IELVHQVSMG------MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
Query: 722 HDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM--F 778
+ + + K + + APE + S+ D +SFG+LM E F+ G++P M
Sbjct: 178 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
Query: 779 EEGLSLHKYAKMGLP 793
E L K +MG P
Sbjct: 238 EVTAMLEKGERMGCP 252
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 602 SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQ 661
+AE ++ + + +V++I C + E LV E G L +L Q +++
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDK 127
Query: 662 RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLL 721
+ L+ ++S+ ++YL ++ VH DL NVLL + A + DFGLS+ L
Sbjct: 128 NI-IELVHQVSMG------MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
Query: 722 HDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM--F 778
+ + + K + + APE + S+ D +SFG+LM E F+ G++P M
Sbjct: 178 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
Query: 779 EEGLSLHKYAKMGLP 793
E L K +MG P
Sbjct: 238 EVTAMLEKGERMGCP 252
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 40 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 94
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L E P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 95 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 151
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N ++ + +GDFG++R + +T R G + +++PE G +T+
Sbjct: 152 RNCMVAEDFTVKIGDFGMTRDIX-----ETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 206
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 207 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLLELMRMCWQYN 265
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 266 PKMRPSFLEIISSIKEEMEPGFR 288
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 602 SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQ 661
+AE ++ + + +V++I C + E LV E G L +L Q +++
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDK 125
Query: 662 RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLL 721
+ L+ ++S+ ++YL ++ VH DL NVLL + A + DFGLS+ L
Sbjct: 126 NI-IELVHQVSMG------MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 175
Query: 722 HDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM--F 778
+ + + K + + APE + S+ D +SFG+LM E F+ G++P M
Sbjct: 176 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 235
Query: 779 EEGLSLHKYAKMGLP 793
E L K +MG P
Sbjct: 236 EVTAMLEKGERMGCP 250
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 49 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 103
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L E P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 104 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 160
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N ++ + +GDFG++R + +T R G + +++PE G +T+
Sbjct: 161 RNCMVAEDFTVKIGDFGMTRDIX-----ETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 215
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 216 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 274
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 275 PKMRPSFLEIISSIKEEMEPGFR 297
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 55 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 109
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L E P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 110 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 166
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N ++ + +GDFG++R ++ +T R G + +++PE G +T+
Sbjct: 167 RNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 221
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 222 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 280
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 281 PKMRPSFLEIISSIKEEMEPGFR 303
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALV 639
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C T+ +V
Sbjct: 66 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV 120
Query: 640 YEFMPNGSLENWLNQKED-------EQNQRP--KLNLMQRLSIAIDVANVLEYLHHHCHT 690
E+ G+L +L + + N+ P ++ +S +A +EYL
Sbjct: 121 -EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL--PVKWMAPE-ALFD 233
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+AE ++ + + +V++I C + E LV E G L +L Q +++
Sbjct: 418 LAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKN- 470
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
+ L+ ++S+ ++YL ++ VH DL NVLL + A + DFGLS+ L
Sbjct: 471 IIELVHQVSMG------MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM--FEE 780
+ + + K + + APE + S+ D +SFG+LM E F+ G++P M E
Sbjct: 522 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
Query: 781 GLSLHKYAKMGLP 793
L K +MG P
Sbjct: 582 TAMLEKGERMGCP 594
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALV 639
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C T+ +V
Sbjct: 66 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV 120
Query: 640 YEFMPNGSLENWLNQKED-------EQNQRP--KLNLMQRLSIAIDVANVLEYLHHHCHT 690
E+ G+L +L + + N+ P ++ +S +A +EYL
Sbjct: 121 -EYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL--PVKWMAPE-ALFD 233
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 19/194 (9%)
Query: 603 FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQR 662
+AE ++ + + +V++I C + E LV E G L +L Q +++
Sbjct: 418 LLAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKN 471
Query: 663 PKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLH 722
+ L+ ++S+ ++YL ++ VH DL NVLL + A + DFGLS+ L
Sbjct: 472 -IIELVHQVSMG------MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 521
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM--FE 779
+ + + K + + APE + S+ D +SFG+LM E F+ G++P M E
Sbjct: 522 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 581
Query: 780 EGLSLHKYAKMGLP 793
L K +MG P
Sbjct: 582 VTAMLEKGERMGCP 595
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 603 FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQR 662
F+ E L+ H N+V++I C+ + +V E + G +L + +
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQ-----KQPIYIVMELVQGGDFLTFL------RTEG 207
Query: 663 PKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLH 722
+L + L + D A +EYL C +H DL N L+ + V + DFG+SR
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEA 264
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT 769
D + R + + + APE G S+ D +SFGIL+ E F+
Sbjct: 265 DGVXAASGGLR-QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK++DL+++ + E +R +H N+V++ S G E L+ EF+
Sbjct: 72 QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY----LVGEELWVLM-EFLQG 126
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G+L + ++Q +LN Q ++ V L YLH ++H D+K ++LL
Sbjct: 127 GALTDIVSQV--------RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLT 175
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ + DFG + + P + + G+ ++APE + +T D +S GI+++
Sbjct: 176 LDGRVKLSDFGFCAQISKDVPKRKX---LVGTPYWMAPEVISRSLYATEVDIWSLGIMVI 232
Query: 766 EMFTGKRP 773
EM G+ P
Sbjct: 233 EMVDGEPP 240
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 27/195 (13%)
Query: 584 ETNVAVKVLD----LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
ET VAVK ++ L++R F+ E ++ ++V+++ S + +V
Sbjct: 47 ETRVAVKTVNESASLRER---IEFLNEASVMKGFTCHHVVRLLGVVSK-----GQPTLVV 98
Query: 640 YEFMPNGSLENWLN--QKEDEQNQ-RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
E M +G L+++L + E E N RP L + + +A ++A+ + YL+ VH D
Sbjct: 99 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRD 155
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVS 752
L N ++ ++ +GDFG++R + +T R G + ++APE G +
Sbjct: 156 LAARNCMVAHDFTVKIGDFGMTRDIX-----ETDXXRKGGKGLLPVRWMAPESLKDGVFT 210
Query: 753 THGDEYSFGILMLEM 767
T D +SFG+++ E+
Sbjct: 211 TSSDMWSFGVVLWEI 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 43/263 (16%)
Query: 584 ETNVAVKVLD----LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
ET VAVK ++ L++R F+ E ++ ++V+++ S + +V
Sbjct: 48 ETRVAVKTVNESASLRER---IEFLNEASVMKGFTCHHVVRLLGVVSK-----GQPTLVV 99
Query: 640 YEFMPNGSLENWLN--QKEDEQNQ-RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
E M +G L+++L + E E N RP L + + +A ++A+ + YL+ VH +
Sbjct: 100 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRN 156
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVS 752
L N ++ ++ +GDFG++R ++ +T R G + ++APE G +
Sbjct: 157 LAARNCMVAHDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMAPESLKDGVFT 211
Query: 753 THGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEIIDPAILEE 807
T D +SFG+++ E+ + ++P +GLS + K G DQ P E
Sbjct: 212 TSSDMWSFGVVLWEITSLAEQPY-----QGLSNEQVLKFVMDGGYLDQ------PDNCPE 260
Query: 808 ALEIQAGIVKELQPNLRAKFHEI 830
+ + + PN+R F EI
Sbjct: 261 RVTDLMRMCWQFNPNMRPTFLEI 283
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 43/263 (16%)
Query: 584 ETNVAVKVLD----LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
ET VAVK ++ L++R F+ E ++ ++V+++ S + +V
Sbjct: 47 ETRVAVKTVNESASLRER---IEFLNEASVMKGFTCHHVVRLLGVVSK-----GQPTLVV 98
Query: 640 YEFMPNGSLENWLN--QKEDEQNQ-RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
E M +G L+++L + E E N RP L + + +A ++A+ + YL+ VH +
Sbjct: 99 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRN 155
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVS 752
L N ++ ++ +GDFG++R ++ +T R G + ++APE G +
Sbjct: 156 LAARNCMVAHDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMAPESLKDGVFT 210
Query: 753 THGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKM----GLPDQVAEIIDPAILEE 807
T D +SFG+++ E+ + ++P +GLS + K G DQ P E
Sbjct: 211 TSSDMWSFGVVLWEITSLAEQPY-----QGLSNEQVLKFVMDGGYLDQ------PDNCPE 259
Query: 808 ALEIQAGIVKELQPNLRAKFHEI 830
+ + + PN+R F EI
Sbjct: 260 RVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E + L + H +VK+ + T G + L+ +F+ G L L+++ + K
Sbjct: 80 ERDILADVNHPFVVKL---HYAFQTEGKLY--LILDFLRGGDLFTRLSKEVMFTEEDVKF 134
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDN 724
L + L++ +D H H+ I++ DLKP N+LLD E + DFGLS+ D+
Sbjct: 135 YLAE-LALGLD----------HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDH 183
Query: 725 SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM-FEEGLS 783
S G++ Y+APE S D +S+G+LM EM TG P +E ++
Sbjct: 184 EKKAYSFC---GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMT 240
Query: 784 LHKYAKMGLP 793
L AK+G+P
Sbjct: 241 LILKAKLGMP 250
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 23/252 (9%)
Query: 586 NVAVKVLDLQQRGASK-SFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VAVK+L K + ++E + + + +H N+V ++ +C T G ++ E+
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC----THGGPV-LVITEYC 132
Query: 644 PNGSLENWLNQKE----DEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
G L N+L +K D+++ RP L L L + VA + +L + +H D+
Sbjct: 133 CYGDLLNFLRRKAEADLDKEDGRP-LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 188
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYS 759
NVLL N VA +GDFGL+R + ++S + + + ++APE + D +S
Sbjct: 189 RNVLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 247
Query: 760 FGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKE 818
+GIL+ E+F+ G P + +K K G ++ PA + +
Sbjct: 248 YGILLWEIFSLGLNPYPGILVNS-KFYKLVKDGY-----QMAQPAFAPKNIYSIMQACWA 301
Query: 819 LQPNLRAKFHEI 830
L+P R F +I
Sbjct: 302 LEPTHRPTFQQI 313
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VAVK +DL+++ + E +R H N+V + +S G+E +V EF+
Sbjct: 72 QVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLV----GDEL-WVVMEFLEG 126
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G+L + + ++N Q ++ + V L YLH+ ++H D+K ++LL
Sbjct: 127 GALTDIVTHT--------RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLT 175
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
++ + DFG + P + + G+ ++APE + T D +S GI+++
Sbjct: 176 SDGRIKLSDFGFCAQVSKEVPKRKX---LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI 232
Query: 766 EMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEI 799
EM G+ P + E L + + LP +V ++
Sbjct: 233 EMIDGEPPYFN--EPPLQAMRRIRDSLPPRVKDL 264
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALV 639
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C T+ +V
Sbjct: 66 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV 120
Query: 640 YEFMPNGSLENWLNQKED-------EQNQRP--KLNLMQRLSIAIDVANVLEYLHHHCHT 690
E+ G+L +L + + N+ P ++ +S +A +EYL
Sbjct: 121 -EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL--PVKWMAPE-ALFD 233
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 27/195 (13%)
Query: 584 ETNVAVKVLD----LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
ET VAVK ++ L++R F+ E ++ ++V+++ S + +V
Sbjct: 44 ETRVAVKTVNESASLRER---IEFLNEASVMKGFTCHHVVRLLGVVSK-----GQPTLVV 95
Query: 640 YEFMPNGSLENWLN--QKEDEQNQ-RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
E M +G L+++L + E E N RP L + + +A ++A+ + YL+ VH D
Sbjct: 96 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRD 152
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVS 752
L N ++ ++ +GDFG++R + +T R G + ++APE G +
Sbjct: 153 LAARNCMVAHDFTVKIGDFGMTRDIX-----ETDXXRKGGKGLLPVRWMAPESLKDGVFT 207
Query: 753 THGDEYSFGILMLEM 767
T D +SFG+++ E+
Sbjct: 208 TSSDMWSFGVVLWEI 222
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 603 FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQR 662
F+ E L+ H N+V++I C+ + +V E + G +L + +
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQ-----KQPIYIVMELVQGGDFLTFL------RTEG 207
Query: 663 PKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLH 722
+L + L + D A +EYL C +H DL N L+ + V + DFG+SR
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEA 264
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT 769
D + R + + + APE G S+ D +SFGIL+ E F+
Sbjct: 265 DGVYAASGGLR-QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALV 639
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C T+ +V
Sbjct: 53 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV 107
Query: 640 YEFMPNGSLENWLNQKED-------EQNQRP--KLNLMQRLSIAIDVANVLEYLHHHCHT 690
E+ G+L +L + + N+ P ++ +S +A +EYL
Sbjct: 108 -EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--- 163
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 164 KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPE-ALFD 220
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 221 RVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALV 639
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C T+ +V
Sbjct: 58 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV 112
Query: 640 YEFMPNGSLENWLNQKED-------EQNQRP--KLNLMQRLSIAIDVANVLEYLHHHCHT 690
E+ G+L +L + + N+ P ++ +S +A +EYL
Sbjct: 113 -EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--- 168
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 169 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPE-ALFD 225
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 226 RVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALV 639
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C T+ +V
Sbjct: 66 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIITLLGAC----TQDGPLYVIV 120
Query: 640 YEFMPNGSLENWLNQKED-------EQNQRP--KLNLMQRLSIAIDVANVLEYLHHHCHT 690
E+ G+L +L + + N+ P ++ +S +A +EYL
Sbjct: 121 -EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPE-ALFD 233
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALV 639
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C T+ +V
Sbjct: 55 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV 109
Query: 640 YEFMPNGSLENWLNQKED-------EQNQRP--KLNLMQRLSIAIDVANVLEYLHHHCHT 690
E+ G+L +L + + N+ P ++ +S +A +EYL
Sbjct: 110 -EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--- 165
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 166 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPE-ALFD 222
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 223 RVYTHQSDVWSFGVLMWEIFT 243
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 42 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 96
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L E P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 97 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 153
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N + + +GDFG++R ++ +T R G + +++PE G +T+
Sbjct: 154 RNCXVAEDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 208
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 209 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLLELMRMCWQYN 267
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 268 PKMRPSFLEIISSIKEEMEPGFR 290
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALV 639
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C T+ +V
Sbjct: 112 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV 166
Query: 640 YEFMPNGSLENWLNQKED-------EQNQRP--KLNLMQRLSIAIDVANVLEYLHHHCHT 690
E+ G+L +L + + N+ P ++ +S +A +EYL
Sbjct: 167 -EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--- 222
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 223 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPE-ALFD 279
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 280 RVYTHQSDVWSFGVLMWEIFT 300
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 28/196 (14%)
Query: 583 EETNVAVKVLDLQQRGA--SKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA--- 637
+ T V V LQ G + F E + L+++ +VK RG +
Sbjct: 33 DNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY---------RGVSYGPGRP 83
Query: 638 ---LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYL-HHHCHTSIV 693
LV E++P+G L ++L Q R +L+ + L + + +EYL C V
Sbjct: 84 ELRLVMEYLPSGCLRDFL------QRHRARLDASRLLLYSSQICKGMEYLGSRRC----V 133
Query: 694 HCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST 753
H DL N+L+++E + DFGL++LL + + I + APE + S
Sbjct: 134 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSR 193
Query: 754 HGDEYSFGILMLEMFT 769
D +SFG+++ E+FT
Sbjct: 194 QSDVWSFGVVLYELFT 209
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
EF G+LE W+ ++ E KL+ + L + + ++Y+H ++H DLKPS
Sbjct: 114 EFCDKGTLEQWIEKRRGE-----KLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPS 165
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+ L + +GDFGL L ++ +R KG++ Y++PE + + D Y+
Sbjct: 166 NIFLVDTKQVKIGDFGLVTSLKNDG----KRTRSKGTLRYMSPEQISSQDYGKEVDLYAL 221
Query: 761 GILMLEM 767
G+++ E+
Sbjct: 222 GLILAEL 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 27/175 (15%)
Query: 603 FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQ--- 659
++E LR ++H N+V+ I R N +V E+ G L + + + E+
Sbjct: 52 LVSEVNLLRELKHPNIVRYY---DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 660 NQRPKLNLMQRLSIAIDVANVLEYLHHHCHT------SIVHCDLKPSNVLLDNEMVAHVG 713
++ L +M +L++A+ CH +++H DLKP+NV LD + +G
Sbjct: 109 DEEFVLRVMTQLTLAL----------KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG 158
Query: 714 DFGLSRLL-HDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEM 767
DFGL+R+L HD S +T G+ Y++PE + D +S G L+ E+
Sbjct: 159 DFGLARILNHDTSFAKTFV----GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 24/200 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALV 639
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C T+ +V
Sbjct: 66 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV 120
Query: 640 YEFMPNGSLENWLNQKED-------EQNQRP--KLNLMQRLSIAIDVANVLEYLHHHCHT 690
E+ G+L +L + + N+ P ++ +S +A +EYL
Sbjct: 121 -EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE 750
+H DL NVL+ V + DFGL+R ++ N +T+ + + ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKNTTNGRLPVKWMAPE-ALFDR 234
Query: 751 VSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 235 VYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALV 639
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C T+ +V
Sbjct: 66 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIIHLLGAC----TQDGPLYVIV 120
Query: 640 YEFMPNGSLENWLNQKED-------EQNQRP--KLNLMQRLSIAIDVANVLEYLHHHCHT 690
E+ G+L +L + + N+ P ++ +S +A +EYL
Sbjct: 121 -EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPE-ALFD 233
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 116 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 172
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA +++L VH DL N
Sbjct: 173 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 222
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D D + + K + ++A E + +T D +SF
Sbjct: 223 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 282
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 283 GVLLWELMTRGAPPYPDV 300
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + + H+N+V+ I S S+ + ++ E M
Sbjct: 77 QVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLP------RFILLELM 130
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 131 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 187
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + S R G + ++ PE G ++ D
Sbjct: 188 LTCPGPGRVAKIGDFGMARDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 242
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 243 TWSFGVLLWEIFS 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 77 QVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILLELM 130
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 131 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 187
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + S R G + ++ PE G ++ D
Sbjct: 188 LTCPGPGRVAKIGDFGMARDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 242
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 243 TWSFGVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + + H+N+V+ I S S+ + ++ E M
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLP------RFILLELM 116
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 117 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 173
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + S R G + ++ PE G ++ D
Sbjct: 174 LTCPGPGRVAKIGDFGMARDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 228
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 229 TWSFGVLLWEIFS 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 38/261 (14%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C+ G +V
Sbjct: 59 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV- 111
Query: 641 EFMPNGSLENWLNQKEDE-----QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
EF G+L +L K +E + L L + + VA +E+L +H
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHR 168
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+LL + V + DFGL+R ++ + PD + + ++APE +
Sbjct: 169 DLAARNILLSEKNVVKIXDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVYTIQS 227
Query: 756 DEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEAL 809
D +SFG+L+ E+F+ G P D+ F L + +M PD P + + L
Sbjct: 228 DVWSFGVLLWEIFSLGASPYPGVKIDEEFXR--RLKEGTRMRAPDYTT----PEMYQTML 281
Query: 810 EIQAGIVKELQPNLRAKFHEI 830
+ G +P+ R F E+
Sbjct: 282 DCWHG-----EPSQRPTFSEL 297
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 54 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILLELM 107
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 108 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 164
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + S R G + ++ PE G ++ D
Sbjct: 165 LTCPGPGRVAKIGDFGMARDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 219
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 220 TWSFGVLLWEIFS 232
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCS---------SIDT 630
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C+ + +
Sbjct: 66 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS 124
Query: 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT 690
+GN + L P +N+ +EQ + +S +A +EYL
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQ-----MTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPE-ALFD 233
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 58 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 114
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA +++L VH DL N
Sbjct: 115 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 164
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D D + + K + ++A E + +T D +SF
Sbjct: 165 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 224
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 225 GVLLWELMTRGAPPYPDV 242
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 113
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA +++L VH DL N
Sbjct: 114 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 163
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D D + + K + ++A E + +T D +SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 224 GVLLWELMTRGAPPYPDV 241
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C R +V
Sbjct: 55 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC----LRSEGSPLVVLP 110
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
+M +G L N++ +N+ + + + VA +++L VH DL N
Sbjct: 111 YMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 161
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D D + + K + ++A E + +T D +SF
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 222 GVLLWELMTRGAPPYPDV 239
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 113
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA +++L VH DL N
Sbjct: 114 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 163
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D D + + K + ++A E + +T D +SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 224 GVLLWELMTRGAPPYPDV 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 62 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILMELM 115
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 116 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 172
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + S R G + ++ PE G ++ D
Sbjct: 173 LTCPGPGRVAKIGDFGMARDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 227
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 228 TWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 79 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILLELM 132
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 133 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 189
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + S R G + ++ PE G ++ D
Sbjct: 190 LTCPGPGRVAKIGDFGMARDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 244
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 245 TWSFGVLLWEIFS 257
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 111/269 (41%), Gaps = 31/269 (11%)
Query: 583 EETNVAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
+ T V V LQ G + F E + L+++ +VK G + LV
Sbjct: 37 DNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP---GRQSLRLVM 93
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
E++P+G L ++L Q R +L+ + L + + +EYL VH DL
Sbjct: 94 EYLPSGCLRDFL------QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 144
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+++E + DFGL++LL + + I + APE + S D +SF
Sbjct: 145 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 204
Query: 761 GILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQ 820
G+++ E+FT + E L + MG V PA+ ++ G
Sbjct: 205 GVVLYELFTYCDKSCSPSAEFLRM-----MGCERDV-----PALCRLLELLEEGQRLPAP 254
Query: 821 PNLRAKFHEIQVSILRVGILCSEELPRDR 849
P A+ HE+ LC P+DR
Sbjct: 255 PACPAEVHELMK-------LCWAPSPQDR 276
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 62 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 118
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA +++L VH DL N
Sbjct: 119 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 168
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D D + + K + ++A E + +T D +SF
Sbjct: 169 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 228
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 229 GVLLWELMTRGAPPYPDV 246
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 69 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILLELM 122
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 123 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 179
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + S R G + ++ PE G ++ D
Sbjct: 180 LTCPGPGRVAKIGDFGMARDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 234
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 235 TWSFGVLLWEIFS 247
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 62 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILLELM 115
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 116 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 172
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + S R G + ++ PE G ++ D
Sbjct: 173 LTCPGPGRVAKIGDFGMARDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 227
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 228 TWSFGVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 77 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILMELM 130
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 131 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 187
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + S R G + ++ PE G ++ D
Sbjct: 188 LTCPGPGRVAKIGDFGMARDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 242
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 243 TWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILLELM 116
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 117 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 173
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + S R G + ++ PE G ++ D
Sbjct: 174 LTCPGPGRVAKIGDFGMARDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 228
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 229 TWSFGVLLWEIFS 241
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 26/254 (10%)
Query: 583 EETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
E+ NVAVK +K F++E ++++ H ++VK+I E ++ E
Sbjct: 51 EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE------EPTWIIME 104
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
P G L ++L E+N+ L ++ + ++ + + YL + VH D+ N
Sbjct: 105 LYPYGELGHYL-----ERNKN-SLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRN 155
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+L+ + +GDFGLSR + D + S +R+ I +++PE +T D + F
Sbjct: 156 ILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASDVWMFA 213
Query: 762 ILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQ 820
+ M E+ + GK+P L +G+ ++ + P + L +
Sbjct: 214 VCMWEILSFGKQPF-------FWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYD 266
Query: 821 PNLRAKFHEIQVSI 834
P+ R +F E+ S+
Sbjct: 267 PSDRPRFTELVCSL 280
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 583 EETNVAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
+ T V V LQ G + F E + L+++ +VK G + LV
Sbjct: 49 DNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP---GRQSLRLVM 105
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
E++P+G L ++L Q R +L+ + L + + +EYL VH DL
Sbjct: 106 EYLPSGCLRDFL------QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 156
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+++E + DFGL++LL + + I + APE + S D +SF
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 216
Query: 761 GILMLEMFT 769
G+++ E+FT
Sbjct: 217 GVVLYELFT 225
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALV 639
E VAVK+L D + S ++E E ++ I +H+N++ ++ +C T+ +V
Sbjct: 66 EAVTVAVKMLKDDATEEDLS-DLVSEMEMMKMIGKHKNIINLLGAC----TQDGPLYVIV 120
Query: 640 YEFMPNGSLENWLNQKED-------EQNQRP--KLNLMQRLSIAIDVANVLEYLHHHCHT 690
E+ G+L +L + + N+ P ++ +S +A +EYL
Sbjct: 121 -EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPE-ALFD 233
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 26/201 (12%)
Query: 583 EETNVAVKVL--DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSS---------IDT 630
E VAVK+L D ++ S ++E E ++ I +H+N++ ++ +C+ +
Sbjct: 66 EAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYAS 124
Query: 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT 690
+GN + L P +N+ +EQ + +S +A +EYL
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQ-----MTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD-NSPDQTSTSRVKGSIGYVAPEYGALG 749
+H DL NVL+ V + DFGL+R +++ + +T+ R+ + ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--PVKWMAPE-ALFD 233
Query: 750 EVSTH-GDEYSFGILMLEMFT 769
V TH D +SFG+LM E+FT
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 56 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 112
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA ++YL VH DL N
Sbjct: 113 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 162
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D + + K + ++A E + +T D +SF
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 223 GVLLWELMTRGAPPYPDV 240
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 583 EETNVAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
+ T V V LQ G + F E + L+++ +VK G + LV
Sbjct: 36 DNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP---GRQSLRLVM 92
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
E++P+G L ++L Q R +L+ + L + + +EYL VH DL
Sbjct: 93 EYLPSGCLRDFL------QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 143
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+++E + DFGL++LL + + I + APE + S D +SF
Sbjct: 144 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 203
Query: 761 GILMLEMFT 769
G+++ E+FT
Sbjct: 204 GVVLYELFT 212
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 89 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILLELM 142
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 143 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 199
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + S R G + ++ PE G ++ D
Sbjct: 200 LTCPGPGRVAKIGDFGMARDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 254
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 255 TWSFGVLLWEIFS 267
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM--------VAHVGDFGLSRLLHDNS 725
A+ +A + YLH I+H DLK SN+L+ ++ + + DFGL+R H
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH--- 167
Query: 726 PDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+T+ G+ ++APE S D +S+G+L+ E+ TG+ P
Sbjct: 168 --RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VA++ ++LQQ+ + I E +R ++ N+V + S G+E +V E++ G
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY----LVGDEL-WVVMEYLAGG 102
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL + + + ++ Q ++ + LE+LH + ++H D+K N+LL
Sbjct: 103 SLTDVVTETCMDEGQIA--------AVCRECLQALEFLHSN---QVIHRDIKSDNILLGM 151
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ + DFG + +P+Q+ S + G+ ++APE D +S GI+ +E
Sbjct: 152 DGSVKLTDFGFCAQI---TPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208
Query: 767 MFTGKRP 773
M G+ P
Sbjct: 209 MIEGEPP 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 122/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 45 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 99
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 100 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 156
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N ++ + +GDFG++R ++ +T R G + +++PE G +T+
Sbjct: 157 RNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 211
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 212 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 270
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 271 PKMRPSFLEIISSIKEEMEPGFR 293
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A +V LEYLH I++ DLKP N+LLD + DFG ++ + D T
Sbjct: 112 AAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD------VTYX 162
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790
+ G+ Y+APE + + D +SFGIL+ EM G P F + ++ Y K+
Sbjct: 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP----FYDSNTMKTYEKI 215
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 42/265 (15%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C+ G +V
Sbjct: 61 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV- 113
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPK------LNLMQRLSIAIDVANVLEYLHHHCHTS 691
EF G+L +L K +E + P+ L L + + VA +E+L
Sbjct: 114 EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 170
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL N+LL + V + DFGL+R ++ + PD + + ++APE
Sbjct: 171 CIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVY 229
Query: 752 STHGDEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAIL 805
+ D +SFG+L+ E+F+ G P D+ F L + +M PD P +
Sbjct: 230 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMY 283
Query: 806 EEALEIQAGIVKELQPNLRAKFHEI 830
+ L+ G +P+ R F E+
Sbjct: 284 QTMLDCWHG-----EPSQRPTFSEL 303
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 38/261 (14%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C+ G +V
Sbjct: 59 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV- 111
Query: 641 EFMPNGSLENWLNQKEDE-----QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
EF G+L +L K +E + L L + + VA +E+L +H
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHR 168
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DL N+LL + V + DFGL+R ++ + PD + + ++APE +
Sbjct: 169 DLAARNILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVYTIQS 227
Query: 756 DEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEAL 809
D +SFG+L+ E+F+ G P D+ F L + +M PD P + + L
Sbjct: 228 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRAPDYTT----PEMYQTML 281
Query: 810 EIQAGIVKELQPNLRAKFHEI 830
+ G +P+ R F E+
Sbjct: 282 DCWHG-----EPSQRPTFSEL 297
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 122/263 (46%), Gaps = 36/263 (13%)
Query: 584 ETNVAVKVLDLQQRGASK-SFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
ET VA+K ++ + F+ E ++ ++V+++ S + ++ E
Sbjct: 55 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMEL 109
Query: 643 MPNGSLENWLNQKEDEQNQRPKL---NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
M G L+++L P L +L + + +A ++A+ + YL+ + VH DL
Sbjct: 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 166
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGALGEVSTHG 755
N ++ + +GDFG++R ++ +T R G + +++PE G +T+
Sbjct: 167 RNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 221
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL-------PDQVAEII------D 801
D +SFG+++ E+ T ++P + E + L + GL PD + E++ +
Sbjct: 222 DVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLFELMRMCWQYN 280
Query: 802 PAILEEALEIQAGIVKELQPNLR 824
P + LEI + I +E++P R
Sbjct: 281 PKMRPSFLEIISSIKEEMEPGFR 303
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 33/178 (18%)
Query: 603 FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQ--- 659
++E LR ++H N+V+ I R N +V E+ G L + + + E+
Sbjct: 52 LVSEVNLLRELKHPNIVRYY---DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 660 NQRPKLNLMQRLSIAIDVANVLEYLHHHCHT------SIVHCDLKPSNVLLDNEMVAHVG 713
++ L +M +L++A+ CH +++H DLKP+NV LD + +G
Sbjct: 109 DEEFVLRVMTQLTLAL----------KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG 158
Query: 714 DFGLSRLL-HDNSPDQTSTSRVKGSIG---YVAPEYGALGEVSTHGDEYSFGILMLEM 767
DFGL+R+L HD TS K +G Y++PE + D +S G L+ E+
Sbjct: 159 DFGLARILNHD-------TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VA++ ++LQQ+ + I E +R ++ N+V + S G+E +V E++ G
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY----LVGDEL-WVVMEYLAGG 102
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL + + + ++ Q ++ + LE+LH + ++H D+K N+LL
Sbjct: 103 SLTDVVTETCMDEGQIA--------AVCRECLQALEFLHSN---QVIHRDIKSDNILLGM 151
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ + DFG + +P+Q+ S + G+ ++APE D +S GI+ +E
Sbjct: 152 DGSVKLTDFGFCAQI---TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208
Query: 767 MFTGKRP 773
M G+ P
Sbjct: 209 MIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VA++ ++LQQ+ + I E +R ++ N+V + S G+E +V E++ G
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY----LVGDEL-WVVMEYLAGG 102
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL + + + ++ Q ++ + LE+LH + ++H D+K N+LL
Sbjct: 103 SLTDVVTETCMDEGQIA--------AVCRECLQALEFLHSN---QVIHRDIKSDNILLGM 151
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ + DFG + +P+Q+ S + G+ ++APE D +S GI+ +E
Sbjct: 152 DGSVKLTDFGFCAQI---TPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208
Query: 767 MFTGKRP 773
M G+ P
Sbjct: 209 MIEGEPP 215
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 76 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 132
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA ++YL VH DL N
Sbjct: 133 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 182
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D + + K + ++A E + +T D +SF
Sbjct: 183 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 242
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 243 GVLLWELMTRGAPPYPDV 260
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VA++ ++LQQ+ + I E +R ++ N+V + S G+E +V E++ G
Sbjct: 49 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY----LVGDEL-WVVMEYLAGG 103
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL + + + ++ Q ++ + LE+LH + ++H D+K N+LL
Sbjct: 104 SLTDVVTETCMDEGQIA--------AVCRECLQALEFLHSN---QVIHRDIKSDNILLGM 152
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ + DFG + +P+Q+ S + G+ ++APE D +S GI+ +E
Sbjct: 153 DGSVKLTDFGFCAQI---TPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 209
Query: 767 MFTGKRP 773
M G+ P
Sbjct: 210 MIEGEPP 216
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 583 EETNVAVKVLDLQQRG-ASKSFIAECEALRSIRHRNLVKIITSCSSIDT----RGNEFKA 637
++ N A+K + L R A + + E +AL + H +V+ + +T + + K
Sbjct: 29 DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88
Query: 638 LVY---EFMPNGSLENWLNQK-EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIV 693
+Y + +L++W+N + E+ +R L I + +A +E+LH ++
Sbjct: 89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVC-----LHIFLQIAEAVEFLHS---KGLM 140
Query: 694 HCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQT------STSRVKGSIG---YVAPE 744
H DLKPSN+ + V VGDFGL + + +QT + +R G +G Y++PE
Sbjct: 141 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE 200
Query: 745 YGALGEVSTHGDEYSFGILMLEM 767
S D +S G+++ E+
Sbjct: 201 QIHGNSYSHKVDIFSLGLILFEL 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 25/174 (14%)
Query: 603 FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQ--- 659
++E LR ++H N+V+ I R N +V E+ G L + + + E+
Sbjct: 52 LVSEVNLLRELKHPNIVRYY---DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 660 NQRPKLNLMQRLSIAIDVANVLEYLHHHCHT------SIVHCDLKPSNVLLDNEMVAHVG 713
++ L +M +L++A+ CH +++H DLKP+NV LD + +G
Sbjct: 109 DEEFVLRVMTQLTLAL----------KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG 158
Query: 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEM 767
DFGL+R+L+ D+ G+ Y++PE + D +S G L+ E+
Sbjct: 159 DFGLARILNH---DEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 49 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 105
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA ++YL VH DL N
Sbjct: 106 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 155
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D + + K + ++A E + +T D +SF
Sbjct: 156 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 215
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 216 GVLLWELMTRGAPPYPDV 233
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 25/230 (10%)
Query: 587 VAVKVLDLQQRGASKSFI-AECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VA+K++D G+ I E EAL+++RH+++ ++ ++T F +V E+ P
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLY---HVLETANKIF--MVLEYCPG 92
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L +++ ++ + ++ Q + + + Y+H H DLKP N+L D
Sbjct: 93 GELFDYIISQDRLSEEETRVVFRQ-------IVSAVAYVHSQ---GYAHRDLKPENLLFD 142
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY-GALGEVSTHGDEYSFGILM 764
+ DFGL N T GS+ Y APE + + D +S GIL+
Sbjct: 143 EYHKLKLIDFGLCAKPKGNKDYHLQT--CCGSLAYAAPELIQGKSYLGSEADVWSMGILL 200
Query: 765 LEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPA---ILEEALEI 811
+ G P DD + ++L+K G D V + + P+ +L++ L++
Sbjct: 201 YVLMCGFLPFDD--DNVMALYKKIMRGKYD-VPKWLSPSSILLLQQMLQV 247
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 55 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 111
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA ++YL VH DL N
Sbjct: 112 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 161
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D + + K + ++A E + +T D +SF
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 222 GVLLWELMTRGAPPYPDV 239
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C R +V
Sbjct: 75 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC----LRSEGSPLVVLP 130
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
+M +G L N++ +N+ + + + VA ++YL VH DL N
Sbjct: 131 YMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 181
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D + + K + ++A E + +T D +SF
Sbjct: 182 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 241
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 242 GVLLWELMTRGAPPYPDV 259
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 29/198 (14%)
Query: 583 EETNVAVKV------LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636
E+ NVAVK LD +++ F++E ++++ H ++VK+I E
Sbjct: 35 EKINVAVKTCKKDCTLDNKEK-----FMSEAVIMKNLDHPHIVKLIGIIEE------EPT 83
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E P G L ++L + ++ L ++ + ++ + + YL + VH D
Sbjct: 84 WIIMELYPYGELGHYLERNKNS------LKVLTLVLYSLQICKAMAYLES---INCVHRD 134
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+ N+L+ + +GDFGLSR + D + S +R+ I +++PE +T D
Sbjct: 135 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASD 192
Query: 757 EYSFGILMLEMFT-GKRP 773
+ F + M E+ + GK+P
Sbjct: 193 VWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 29/198 (14%)
Query: 583 EETNVAVKV------LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636
E+ NVAVK LD +++ F++E ++++ H ++VK+I E
Sbjct: 39 EKINVAVKTCKKDCTLDNKEK-----FMSEAVIMKNLDHPHIVKLIGIIEE------EPT 87
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E P G L ++L + ++ L ++ + ++ + + YL + VH D
Sbjct: 88 WIIMELYPYGELGHYLERNKNS------LKVLTLVLYSLQICKAMAYLES---INCVHRD 138
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+ N+L+ + +GDFGLSR + D + S +R+ I +++PE +T D
Sbjct: 139 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASD 196
Query: 757 EYSFGILMLEMFT-GKRP 773
+ F + M E+ + GK+P
Sbjct: 197 VWMFAVCMWEILSFGKQP 214
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 113
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA ++YL VH DL N
Sbjct: 114 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 163
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D + + K + ++A E + +T D +SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 224 GVLLWELMTRGAPPYPDV 241
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 54 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 110
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA ++YL VH DL N
Sbjct: 111 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 160
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D + + K + ++A E + +T D +SF
Sbjct: 161 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 220
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 221 GVLLWELMTRGAPPYPDV 238
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 56 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 112
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA ++YL VH DL N
Sbjct: 113 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 162
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D + + K + ++A E + +T D +SF
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 223 GVLLWELMTRGAPPYPDV 240
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 52 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 108
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA ++YL VH DL N
Sbjct: 109 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 158
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D + + K + ++A E + +T D +SF
Sbjct: 159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 219 GVLLWELMTRGAPPYPDV 236
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 113
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA ++YL VH DL N
Sbjct: 114 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 163
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R ++D + + K + ++A E + +T D +SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 224 GVLLWELMTRGAPPYPDV 241
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 582 TEETNVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
T + VA+K+L + A+ F+ E + S+ H +LV+++ C S + LV
Sbjct: 65 TVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVT 118
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+ MP+G L ++++ +D + LN + +A + YL +VH DL
Sbjct: 119 QLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEER---RLVHRDLAAR 169
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
NVL+ + + DFGL+RLL + + + K I ++A E + + D +S+
Sbjct: 170 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGG-KMPIKWMALECIHYRKFTHQSDVWSY 228
Query: 761 GILMLEMFT-GKRPTD--------DMFEEGLSL 784
G+ + E+ T G +P D D+ E+G L
Sbjct: 229 GVTIWELMTFGGKPYDGIPTREIPDLLEKGERL 261
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 103 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILLELM 156
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 157 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 213
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + R G + ++ PE G ++ D
Sbjct: 214 LTCPGPGRVAKIGDFGMARDIY-----RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 268
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 269 TWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 80 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILLELM 133
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 134 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 190
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG++R ++ + R G + ++ PE G ++ D
Sbjct: 191 LTCPGPGRVAKIGDFGMARDIY-----RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 245
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 246 TWSFGVLLWEIFS 258
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+V +I S LV+EFM L+
Sbjct: 55 LDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-----ERCLTLVFEFM-EKDLKKV 108
Query: 652 LNQ-KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNVLLDNEMV 709
L++ K Q+ + K+ L Q L VA HCH I+H DLKP N+L++++
Sbjct: 109 LDENKTGLQDSQIKIYLYQLLR---GVA--------HCHQHRILHRDLKPQNLLINSDGA 157
Query: 710 AHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY-GALGEVSTHGDEYSFGILMLEMF 768
+ DFGL+R P ++ T V ++ Y AP+ + ST D +S G + EM
Sbjct: 158 LKLADFGLARAF--GIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI 214
Query: 769 TGK 771
TGK
Sbjct: 215 TGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+V +I S LV+EFM L+
Sbjct: 55 LDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-----ERCLTLVFEFM-EKDLKKV 108
Query: 652 LNQ-KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNVLLDNEMV 709
L++ K Q+ + K+ L Q L VA HCH I+H DLKP N+L++++
Sbjct: 109 LDENKTGLQDSQIKIYLYQLLR---GVA--------HCHQHRILHRDLKPQNLLINSDGA 157
Query: 710 AHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY-GALGEVSTHGDEYSFGILMLEMF 768
+ DFGL+R P ++ T V ++ Y AP+ + ST D +S G + EM
Sbjct: 158 LKLADFGLARAF--GIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI 214
Query: 769 TGK 771
TGK
Sbjct: 215 TGK 217
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 25/175 (14%)
Query: 606 ECEALRSIRHRNLVKIITSC----------SSIDTRGNEFKALV--YEFMPNGSLENWLN 653
E +AL + H N+V C SS ++ ++ K L EF G+LE W+
Sbjct: 54 EVKALAKLDHVNIVHY-NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 112
Query: 654 QKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713
++ E KL+ + L + + ++Y+H +++ DLKPSN+ L + +G
Sbjct: 113 KRRGE-----KLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIG 164
Query: 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMF 768
DFGL L ++ R KG++ Y++PE + + D Y+ G+++ E+
Sbjct: 165 DFGLVTSLKNDG----KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 583 EETNVAVKVLD-LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ + AVK L+ + G F+ E ++ H N++ ++ C + + G+ L Y
Sbjct: 58 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPY- 114
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M +G L N++ +N+ + + + VA +++L VH DL N
Sbjct: 115 -MKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 164
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
+LD + V DFGL+R + D D + + K + ++A E + +T D +SF
Sbjct: 165 CMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 224
Query: 761 GILMLEMFT-GKRPTDDM 777
G+L+ E+ T G P D+
Sbjct: 225 GVLLWELMTRGAPPYPDV 242
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C+ G +V
Sbjct: 96 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV- 148
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPK------LNLMQRLSIAIDVANVLEYLHHHCHTS 691
EF G+L +L K +E P+ L L + + VA +E+L
Sbjct: 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 205
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL N+LL + V + DFGL+R ++ + PD + + ++APE
Sbjct: 206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVY 264
Query: 752 STHGDEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAIL 805
+ D +SFG+L+ E+F+ G P D+ F L + +M PD P +
Sbjct: 265 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRAPDYTT----PEMY 318
Query: 806 EEALEIQAGIVKELQPNLRAKFHEI 830
+ L+ G +P+ R F E+
Sbjct: 319 QTMLDCWHG-----EPSQRPTFSEL 338
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 23/193 (11%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKII-TSCSSIDTRGNEFKALVYEFM 643
VAVK L ++ F+ E + H+N+V+ I S S+ + ++ E M
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP------RFILLELM 116
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L+++L + +Q L ++ L +A D+A +YL + +H D+ N L
Sbjct: 117 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 173
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPEYGALGEVSTHGD 756
L VA +GDFG+++ ++ + S R G + ++ PE G ++ D
Sbjct: 174 LTCPGPGRVAKIGDFGMAQDIY-----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 228
Query: 757 EYSFGILMLEMFT 769
+SFG+L+ E+F+
Sbjct: 229 TWSFGVLLWEIFS 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C+ G +V
Sbjct: 59 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV- 111
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPK------LNLMQRLSIAIDVANVLEYLHHHCHTS 691
EF G+L +L K +E P+ L L + + VA +E+L
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 168
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL N+LL + V + DFGL+R ++ + PD + + ++APE
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PDXVRKGDARLPLKWMAPETIFDRVY 227
Query: 752 STHGDEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAIL 805
+ D +SFG+L+ E+F+ G P D+ F L + +M PD P +
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMY 281
Query: 806 EEALEIQAGIVKELQPNLRAKFHEI 830
+ L+ G +P+ R F E+
Sbjct: 282 QTMLDCWHG-----EPSQRPTFSEL 301
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C+ G +V
Sbjct: 59 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV- 111
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPK------LNLMQRLSIAIDVANVLEYLHHHCHTS 691
EF G+L +L K +E P+ L L + + VA +E+L
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 168
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL N+LL + V + DFGL+R ++ + PD + + ++APE
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVY 227
Query: 752 STHGDEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAIL 805
+ D +SFG+L+ E+F+ G P D+ F L + +M PD P +
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMY 281
Query: 806 EEALEIQAGIVKELQPNLRAKFHEI 830
+ L+ G +P+ R F E+
Sbjct: 282 QTMLDCWHG-----EPSQRPTFSEL 301
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 32/216 (14%)
Query: 583 EETNVAVKVLDLQQRGASKSFIAECE---ALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E + V + ++ + +SF A + A+ S+ H ++V+++ C G+ + LV
Sbjct: 39 ESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQ-LV 92
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+++P GSL + + Q R L L+ + +A + YL H +VH +L
Sbjct: 93 TQYLPLGSLLDHVRQ------HRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAA 143
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPD--QTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
NVLL + V DFG++ LL PD Q S K I ++A E G+ + D
Sbjct: 144 RNVLLKSPSQVQVADFGVADLL---PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDV 200
Query: 758 YSFGILMLEMFT-GKRP--------TDDMFEEGLSL 784
+S+G+ + E+ T G P D+ E+G L
Sbjct: 201 WSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERL 236
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 582 TEETNVAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
T + VA+K+L + A+ F+ E + S+ H +LV+++ C S + LV
Sbjct: 42 TVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVT 95
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+ MP+G L ++++ +D + LN + +A + YL +VH DL
Sbjct: 96 QLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEER---RLVHRDLAAR 146
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
NVL+ + + DFGL+RLL + + + K I ++A E + + D +S+
Sbjct: 147 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGG-KMPIKWMALECIHYRKFTHQSDVWSY 205
Query: 761 GILMLEMFT-GKRPTD--------DMFEEGLSL 784
G+ + E+ T G +P D D+ E+G L
Sbjct: 206 GVTIWELMTFGGKPYDGIPTREIPDLLEKGERL 238
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 40/263 (15%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C+ G +V
Sbjct: 61 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV- 113
Query: 641 EFMPNGSLENWLNQKEDE-QNQRPK------LNLMQRLSIAIDVANVLEYLHHHCHTSIV 693
EF G+L +L K +E +P+ L L + + VA +E+L +
Sbjct: 114 EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXI 170
Query: 694 HCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST 753
H DL N+LL + V + DFGL+R + + PD + + ++APE +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKD-PDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 754 HGDEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEE 807
D +SFG+L+ E+F+ G P D+ F L + +M PD P + +
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMYQT 283
Query: 808 ALEIQAGIVKELQPNLRAKFHEI 830
L+ G +P+ R F E+
Sbjct: 284 MLDCWHG-----EPSQRPTFSEL 301
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 41/264 (15%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C+ G +V
Sbjct: 60 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV- 112
Query: 641 EFMPNGSLENWLNQKEDE--QNQRPK------LNLMQRLSIAIDVANVLEYLHHHCHTSI 692
EF G+L +L K +E + P+ L L + + VA +E+L
Sbjct: 113 EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKC 169
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVS 752
+H DL N+LL + V + DFGL+R + + PD + + ++APE +
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKD-PDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 753 THGDEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILE 806
D +SFG+L+ E+F+ G P D+ F L + +M PD P + +
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMYQ 282
Query: 807 EALEIQAGIVKELQPNLRAKFHEI 830
L+ G +P+ R F E+
Sbjct: 283 TMLDCWHG-----EPSQRPTFSEL 301
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C T+ ++
Sbjct: 50 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC----TKPGGPLMVIT 102
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPK------LNLMQRLSIAIDVANVLEYLHHHCHTS 691
EF G+L +L K +E P+ L L + + VA +E+L
Sbjct: 103 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 159
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL N+LL + V + DFGL+R ++ + PD + + ++APE
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVY 218
Query: 752 STHGDEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAIL 805
+ D +SFG+L+ E+F+ G P D+ F L + +M PD P +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMY 272
Query: 806 EEALEIQAGIVKELQPNLRAKFHEI 830
+ L+ G +P+ R F E+
Sbjct: 273 QTMLDCWHG-----EPSQRPTFSEL 292
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 32/216 (14%)
Query: 583 EETNVAVKVLDLQQRGASKSFIAECE---ALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E + V + ++ + +SF A + A+ S+ H ++V+++ C G+ + LV
Sbjct: 57 ESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQ-LV 110
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+++P GSL + + Q R L L+ + +A + YL H +VH +L
Sbjct: 111 TQYLPLGSLLDHVRQ------HRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAA 161
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPD--QTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
NVLL + V DFG++ LL PD Q S K I ++A E G+ + D
Sbjct: 162 RNVLLKSPSQVQVADFGVADLL---PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDV 218
Query: 758 YSFGILMLEMFT-GKRP--------TDDMFEEGLSL 784
+S+G+ + E+ T G P D+ E+G L
Sbjct: 219 WSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERL 254
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 36/264 (13%)
Query: 587 VAVKVLDLQQRGASK-SFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK+L K + ++E + + + +H N+V ++ +C T G ++ E+
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC----THGGPV-LVITEYCC 118
Query: 645 NGSLENWLNQKE-----------------DEQNQRPKLNLMQRLSIAIDVANVLEYLHHH 687
G L N+L +K D+++ RP L L L + VA + +L
Sbjct: 119 YGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP-LELRDLLHFSSQVAQGMAFL--- 174
Query: 688 CHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA 747
+ +H D+ NVLL N VA +GDFGL+R + ++S + + + ++APE
Sbjct: 175 ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVKWMAPESIF 233
Query: 748 LGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILE 806
+ D +S+GIL+ E+F+ G P + +K K G ++ PA
Sbjct: 234 DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYKLVKDGY-----QMAQPAFAP 287
Query: 807 EALEIQAGIVKELQPNLRAKFHEI 830
+ + L+P R F +I
Sbjct: 288 KNIYSIMQACWALEPTHRPTFQQI 311
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C T+ ++
Sbjct: 50 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC----TKPGGPLMVIT 102
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPK------LNLMQRLSIAIDVANVLEYLHHHCHTS 691
EF G+L +L K +E P+ L L + + VA +E+L
Sbjct: 103 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 159
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL N+LL + V + DFGL+R ++ + PD + + ++APE
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVY 218
Query: 752 STHGDEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAIL 805
+ D +SFG+L+ E+F+ G P D+ F L + +M PD P +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMY 272
Query: 806 EEALEIQAGIVKELQPNLRAKFHEI 830
+ L+ G +P+ R F E+
Sbjct: 273 QTMLDCWHG-----EPSQRPTFSEL 292
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 585 TNVAVKVL--DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN-EFKALVYE 641
VAVK+L D+ + F+ E ++ H ++ K++ +G ++
Sbjct: 52 VKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILP 111
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
FM +G L +L +N L L + +D+A +EYL + +H DL N
Sbjct: 112 FMKHGDLHAFLLASRIGENPF-NLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARN 167
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+L +M V DFGLSR ++ + + K + ++A E A + H D ++FG
Sbjct: 168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS-KLPVKWLALESLADNLYTVHSDVWAFG 226
Query: 762 ILMLEMFT-GKRP 773
+ M E+ T G+ P
Sbjct: 227 VTMWEIMTRGQTP 239
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 586 NVAVKVLDLQQRGASK-SFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VAVK+L + + + + ++E + + + H N+V ++ +C+ G + L++E+
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT---LSGPIY--LIFEYC 131
Query: 644 PNGSLENWLNQK-----EDE---QNQR-----PKLNLM---QRLSIAIDVANVLEYLHHH 687
G L N+L K EDE +NQ+ LN++ L A VA +E+L
Sbjct: 132 CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK 191
Query: 688 CHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA 747
S VH DL NVL+ + V + DFGL+R + +S + + + ++APE
Sbjct: 192 ---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS-NYVVRGNARLPVKWMAPESLF 247
Query: 748 LGEVSTHGDEYSFGILMLEMFT 769
G + D +S+GIL+ E+F+
Sbjct: 248 EGIYTIKSDVWSYGILLWEIFS 269
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VA++ ++LQQ+ + I E +R ++ N+V + S G+E +V E++ G
Sbjct: 49 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY----LVGDEL-WVVMEYLAGG 103
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
SL + + + ++ Q ++ + LE+LH + ++H ++K N+LL
Sbjct: 104 SLTDVVTETCMDEGQIA--------AVCRECLQALEFLHSN---QVIHRNIKSDNILLGM 152
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ + DFG + +P+Q+ S + G+ ++APE D +S GI+ +E
Sbjct: 153 DGSVKLTDFGFCAQI---TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 209
Query: 767 MFTGKRP 773
M G+ P
Sbjct: 210 MIEGEPP 216
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 91
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 92 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 138
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S H S +T+ S G++ Y+ PE + E H ++
Sbjct: 139 NLLLGSAGELKIADFGWS--CHAPSSRRTTLS---GTLDYLPPE---MIEGRMHDEKVDL 190
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 95
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G + L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 96 PRGEVYKELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 142
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S +T+ G++ Y+ PE + E H ++
Sbjct: 143 NLLLGSAGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 194
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 42/241 (17%)
Query: 585 TNVAVKVLDLQQRGAS-KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
T VAVK+L + + ++E L+ + H +++K+ +CS + L+ E+
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-----DGPLLLIVEYA 108
Query: 644 PNGSLENWLNQKE------------------DEQNQRPKLNLMQRLSIAIDVANVLEYLH 685
GSL +L + D ++R L + +S A ++ ++YL
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER-ALTMGDLISFAWQISQGMQYL- 166
Query: 686 HHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY 745
S+VH DL N+L+ + DFGLSR +++ S VK S G + ++
Sbjct: 167 --AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED------SXVKRSQGRIPVKW 218
Query: 746 GALGEV-----STHGDEYSFGILMLEMFT-GKRPTDDMFEEGLS--LHKYAKMGLPDQVA 797
A+ + +T D +SFG+L+ E+ T G P + E L L +M PD +
Sbjct: 219 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCS 278
Query: 798 E 798
E
Sbjct: 279 E 279
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 33 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 87
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + ++AN L Y CH+ ++H D+KP
Sbjct: 88 PLGTVYRELQKLSKFDEQRT---------ATYITELANALSY----CHSKRVIHRDIKPE 134
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S +T+ G++ Y+ PE + E H D
Sbjct: 135 NLLLGSAGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 186
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 187 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 228
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 40 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 94
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + ++AN L Y CH+ ++H D+KP
Sbjct: 95 PLGTVYRELQKLSKFDEQRT---------ATYITELANALSY----CHSKRVIHRDIKPE 141
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S +T+ G++ Y+ PE + E H D
Sbjct: 142 NLLLGSAGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 193
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 194 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 235
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C+ G +V
Sbjct: 59 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV- 111
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPK------LNLMQRLSIAIDVANVLEYLHHHCHTS 691
EF G+L +L K +E P+ L L + + VA +E+L
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 168
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL N+LL + V + DFGL+R + + PD + + ++APE
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIXKD-PDXVRKGDARLPLKWMAPETIFDRVY 227
Query: 752 STHGDEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAIL 805
+ D +SFG+L+ E+F+ G P D+ F L + +M PD P +
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMY 281
Query: 806 EEALEIQAGIVKELQPNLRAKFHEI 830
+ L+ G +P+ R F E+
Sbjct: 282 QTMLDCWHG-----EPSQRPTFSEL 301
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 35 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 89
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + ++AN L Y CH+ ++H D+KP
Sbjct: 90 PLGTVYRELQKLSKFDEQRT---------ATYITELANALSY----CHSKRVIHRDIKPE 136
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S +T+ G++ Y+ PE + E H D
Sbjct: 137 NLLLGSAGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 188
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 189 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 230
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 93
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + ++AN L Y CH+ ++H D+KP
Sbjct: 94 PLGTVYRELQKLSKFDEQRT---------ATYITELANALSY----CHSKRVIHRDIKPE 140
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S +T+ G++ Y+ PE + E H D
Sbjct: 141 NLLLGSAGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 192
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C+ G +V
Sbjct: 50 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV- 102
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPK------LNLMQRLSIAIDVANVLEYLHHHCHTS 691
EF G+L +L K +E P+ L L + + VA +E+L
Sbjct: 103 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 159
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL N+LL + V + DFGL+R + + PD + + ++APE
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKD-PDXVRKGDARLPLKWMAPETIFDRVY 218
Query: 752 STHGDEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAIL 805
+ D +SFG+L+ E+F+ G P D+ F L + +M PD P +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMY 272
Query: 806 EEALEIQAGIVKELQPNLRAKFHEI 830
+ L+ G +P+ R F E+
Sbjct: 273 QTMLDCWHG-----EPSQRPTFSEL 292
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 586 NVAVKVLDLQQRGAS----KSFIAECEALRSIRHR-NLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L + GA+ ++ ++E + L I H N+V ++ +C T+ ++
Sbjct: 50 TVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC----TKPGGPLMVIT 102
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPK------LNLMQRLSIAIDVANVLEYLHHHCHTS 691
EF G+L +L K +E P+ L L + + VA +E+L
Sbjct: 103 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 159
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV 751
+H DL N+LL + V + DFGL+R + + PD + + ++APE
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKD-PDXVRKGDARLPLKWMAPETIFDRVY 218
Query: 752 STHGDEYSFGILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAIL 805
+ D +SFG+L+ E+F+ G P D+ F L + +M PD P +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMY 272
Query: 806 EEALEIQAGIVKELQPNLRAKFHEI 830
+ L+ G +P+ R F E+
Sbjct: 273 QTMLDCWHG-----EPSQRPTFSEL 292
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 45 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 98
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 99 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 150
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE--VSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 151 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGXKYYSTAVDIWSLGCIFAEMVT 206
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 207 RRALFPGDSEIDQLFRI--FRTLGTPDEV 233
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 27/256 (10%)
Query: 587 VAVKVLDLQQRGASK-SFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK+L K + ++E + + + +H N+V ++ +C T G ++ E+
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC----THGGPV-LVITEYCC 133
Query: 645 NGSLENWLNQKED---EQNQRPKLNLMQRLS------IAIDVANVLEYLHHHCHTSIVHC 695
G L N+L +K E + P N ++LS + VA + +L + +H
Sbjct: 134 YGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHR 190
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
D+ NVLL N VA +GDFGL+R + ++S + + + ++APE +
Sbjct: 191 DVAARNVLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVKWMAPESIFDCVYTVQS 249
Query: 756 DEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAG 814
D +S+GIL+ E+F+ G P + +K K G ++ PA + +
Sbjct: 250 DVWSYGILLWEIFSLGLNPYPGILVNS-KFYKLVKDGY-----QMAQPAFAPKNIYSIMQ 303
Query: 815 IVKELQPNLRAKFHEI 830
L+P R F +I
Sbjct: 304 ACWALEPTHRPTFQQI 319
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 45 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 98
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 99 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 150
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 151 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 206
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 207 RRALFPGDSEIDQLFRI--FRTLGTPDEV 233
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 38 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 91
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 92 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 143
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE--VSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGXKYYSTAVDIWSLGCIFAEMVT 199
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 200 RRALFPGDSEIDQLFRI--FRTLGTPDEV 226
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 39 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 92
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 93 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 144
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 145 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 201 RRALFPGDSEIDQLFRI--FRTLGTPDEV 227
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 589 VKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSL 648
V++ DL A I E + L+ + H N++K S NE +V E G L
Sbjct: 65 VQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF----IEDNELN-IVLELADAGDL 119
Query: 649 ENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM 708
+ + ++ P+ + + + + + LE++H ++H D+KP+NV +
Sbjct: 120 SRMIKHFKKQKRLIPERTVWKYF---VQLCSALEHMHSR---RVMHRDIKPANVFITATG 173
Query: 709 VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMF 768
V +GD GL R S T+ + G+ Y++PE + D +S G L+ EM
Sbjct: 174 VVKLGDLGLGRFF---SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 230
Query: 769 TGKRP 773
+ P
Sbjct: 231 ALQSP 235
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+A L + H N+V+++ C++ T LV+E + + L +L++ P
Sbjct: 62 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPP-----P 115
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
L + L++LH +C IVH DLKP N+L+ + + DFGL+R+
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS- 171
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGK 771
Q + + V ++ Y APE +T D +S G + EMF K
Sbjct: 172 ---YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 38 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 91
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 92 MDASALTGIPLPLIK-----SYLFQLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIK 143
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQVA 797
+ P D ++ + + +G PD+V
Sbjct: 200 RRALFPGDSEIDQLFRI--FRTLGTPDEVV 227
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 38 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 91
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 92 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 143
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 200 RRALFPGDSEIDQLFRI--FRTLGTPDEV 226
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 37 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 90
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 91 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 142
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 143 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 199 RRALFPGDSEIDQLFRI--FRTLGTPDEV 225
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 90
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 91 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 137
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S +T+ G++ Y+ PE + E H ++
Sbjct: 138 NLLLGSAGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 189
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 38 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 91
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 92 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 143
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 200 RRALFPGDSEIDQLFRI--FRTLGTPDEV 226
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 37 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 90
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 91 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 142
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 143 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 199 RRALFPGDSEIDQLFRI--FRTLGTPDEV 225
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 38 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 91
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 92 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 143
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 200 RRALFPGDSEIDQLFRI--FRTLGTPDEV 226
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 37 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 90
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 91 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 142
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 143 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 199 RRALFPGDSEIDQLFRI--FRTLGTPDEV 225
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S + S V
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV- 195
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE S D ++ G ++ ++ G P
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+A L + H N+V+++ C++ T LV+E + + L +L++ P
Sbjct: 54 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPP-----P 107
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
L + L++LH +C IVH DLKP N+L+ + + DFGL+R+
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS- 163
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGK 771
Q + + V ++ Y APE +T D +S G + EMF K
Sbjct: 164 ---YQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 93
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 94 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 140
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S +T+ G++ Y+ PE + E H ++
Sbjct: 141 NLLLGSAGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 192
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 90
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + ++AN L Y CH+ ++H D+KP
Sbjct: 91 PLGTVYRELQKLSKFDEQRT---------ATYITELANALSY----CHSKRVIHRDIKPE 137
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S +T G++ Y+ PE + E H D
Sbjct: 138 NLLLGSAGELKIADFGWS--VHAPSSRRTXLC---GTLDYLPPE---MIEGRMHDEKVDL 189
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 95
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 96 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 142
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S +T+ G++ Y+ PE + E H ++
Sbjct: 143 NLLLGSAGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 194
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 67/240 (27%), Positives = 102/240 (42%), Gaps = 40/240 (16%)
Query: 584 ETNVAVKVLDLQQRGASKS----FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
ET V V +LQ R +KS F E E L+ ++H N+V+ S S +G + LV
Sbjct: 49 ETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWEST-VKGKKCIVLV 107
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRL-SIAIDVANVLEYLHHHCHTSIVHCDLK 698
E +G+L+ +L +R K+ ++ L S + L++LH I+H DLK
Sbjct: 108 TELXTSGTLKTYL--------KRFKVXKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLK 158
Query: 699 PSNVLLDNEM-VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
N+ + +GD GL+ L S K IG PE+ A DE
Sbjct: 159 CDNIFITGPTGSVKIGDLGLATL--------KRASFAKAVIG--TPEFXAPEXYEEKYDE 208
Query: 758 ----YSFGILMLEMFTGKRPTDD---------MFEEGLSLHKYAKMGLPDQVAEIIDPAI 804
Y+FG LE T + P + G+ + K+ +P +V EII+ I
Sbjct: 209 SVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP-EVKEIIEGCI 267
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 587 VAVKVLDLQ-QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK-ALVYEFMP 644
VA+K + L + G + I E ++ ++H N+V++ D E K LV+EFM
Sbjct: 33 VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLY------DVIHTENKLTLVFEFMD 86
Query: 645 NGSLENWLNQKEDEQNQRP-KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
N L+ +++ + R +LNL++ + L + H + I+H DLKP N+L
Sbjct: 87 N-DLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQGLAFCHEN---KILHRDLKPQNLL 140
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE--VSTHGDEYSFG 761
++ +GDFGL+R P T +S V ++ Y AP+ +G ST D +S G
Sbjct: 141 INKRGQLKLGDFGLARAF--GIPVNTFSSEVV-TLWYRAPDV-LMGSRTYSTSIDIWSCG 196
Query: 762 ILMLEMFTGK 771
++ EM TGK
Sbjct: 197 CILAEMITGK 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 95
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPSNV 702
P G++ L + QR + ++AN L Y CH+ ++H D+KP N+
Sbjct: 96 PLGTVYRELQKLSKFDEQRTA-------TYITELANALSY----CHSKRVIHRDIKPENL 144
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGI 762
LL + + DFG S +H S +T+ G++ Y+ PE D +S G+
Sbjct: 145 LLGSAGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPEXIEGRXHDEKVDLWSLGV 199
Query: 763 LMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
L E GK P + + ++E + PD V E
Sbjct: 200 LCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 90
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 91 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 137
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S +T G++ Y+ PE + E H D
Sbjct: 138 NLLLGSAGELKIADFGWS--VHAPSSRRTDLC---GTLDYLPPE---MIEGRMHDEKVDL 189
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 42 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 95
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 96 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 147
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 148 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 203
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 204 RRALFPGDSEIDQLFRI--FRTLGTPDEV 230
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 583 EETNVAVKVLDLQQRGASKS---FIAECEALRSIRHRNLVKIITSCSSIDTRG-NEFKAL 638
++T V + +Q + K+ + E + ++ + H N+V + N+ L
Sbjct: 36 QDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLL 95
Query: 639 VYEFMPNGSLENWLNQKED--EQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
E+ G L +LNQ E+ + P L+ D+++ L YLH + I+H D
Sbjct: 96 AMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS------DISSALRYLHEN---RIIHRD 146
Query: 697 LKPSNVLLD---NEMVAHVGDFGLSRLLHDNSPDQTS-TSRVKGSIGYVAPEYGALGEVS 752
LKP N++L ++ + D G ++ L DQ + G++ Y+APE + +
Sbjct: 147 LKPENIVLQPGPQRLIHKIIDLGYAKEL-----DQGELCTEFVGTLQYLAPELLEQKKYT 201
Query: 753 THGDEYSFGILMLEMFTGKRP 773
D +SFG L E TG RP
Sbjct: 202 VTVDYWSFGTLAFECITGFRP 222
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 90
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 91 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 137
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S +T G++ Y+ PE + E H ++
Sbjct: 138 NLLLGSAGELKIADFGWS--VHAPSSRRTELC---GTLDYLPPE---MIEGRMHDEKVDL 189
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 116
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 117 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 163
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S +T+ G++ Y+ PE + E H ++
Sbjct: 164 NLLLGSAGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 215
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 53 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 107
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 108 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 154
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S +T+ G++ Y+ PE + E H ++
Sbjct: 155 NLLLGSAGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 206
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 207 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 248
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 601 KSFIAECEALRSIRHRNLVKIITSCSSIDTRG-NEFKALVYEFMPNGSLENWLNQKED-- 657
+ + E + ++ + H N+V + N+ L E+ G L +LNQ E+
Sbjct: 58 ERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC 117
Query: 658 EQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD---NEMVAHVGD 714
+ P L+ D+++ L YLH + I+H DLKP N++L ++ + D
Sbjct: 118 GLKEGPIRTLLS------DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 168
Query: 715 FGLSRLLHDNSPDQTS-TSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G ++ L DQ + G++ Y+APE + + D +SFG L E TG RP
Sbjct: 169 LGYAKEL-----DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 587 VAVKVLDLQ--QRGASKSFIAECEALR---SIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
VA+K + +Q + G S I E LR + H N+V++ C+ T LV+E
Sbjct: 40 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE 99
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
+ + L +L++ + P + + + L++LH H +VH DLKP N
Sbjct: 100 HV-DQDLTTYLDKVPE-----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQN 150
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+L+ + + DFGL+R+ Q + + V ++ Y APE +T D +S G
Sbjct: 151 ILVTSSGQIKLADFGLARIYS----FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 762 ILMLEMFTGK 771
+ EMF K
Sbjct: 207 CIFAEMFRRK 216
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 90
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 91 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 137
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S +T G++ Y+ PE + E H D
Sbjct: 138 NLLLGSAGELKIADFGWS--VHAPSSRRTDLC---GTLDYLPPE---MIEGRMHDEKVDL 189
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 95
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G + L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 96 PRGEVYKELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 142
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S + + G++ Y+ PE + E H ++
Sbjct: 143 NLLLGSAGELKIADFGWS--VHAPS---SRRXXLXGTLDYLPPE---MIEGRMHDEKVDL 194
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 587 VAVKVLDLQ--QRGASKSFIAECEALR---SIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
VA+K + +Q + G S I E LR + H N+V++ C+ T LV+E
Sbjct: 40 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE 99
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
+ + L +L++ + P + + + L++LH H +VH DLKP N
Sbjct: 100 HV-DQDLTTYLDKVPE-----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQN 150
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+L+ + + DFGL+R+ Q + + V ++ Y APE +T D +S G
Sbjct: 151 ILVTSSGQIKLADFGLARIYS----FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 762 ILMLEMFTGK 771
+ EMF K
Sbjct: 207 CIFAEMFRRK 216
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 91
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 92 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 138
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S +T G++ Y+ PE + E H ++
Sbjct: 139 NLLLGSAGELKIADFGWS--VHAPSSRRTDLC---GTLDYLPPE---MIEGRMHDEKVDL 190
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+A L + H N+V+++ C++ T LV+E + + L +L++ P
Sbjct: 54 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPP-----P 107
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
L + L++LH +C IVH DLKP N+L+ + + DFGL+R+
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS- 163
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGK 771
Q + V ++ Y APE +T D +S G + EMF K
Sbjct: 164 ---YQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 587 VAVKVLDLQ--QRGASKSFIAECEALR---SIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
VA+K + +Q + G S I E LR + H N+V++ C+ T LV+E
Sbjct: 40 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE 99
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
+ + L +L++ + P + + + L++LH H +VH DLKP N
Sbjct: 100 HV-DQDLTTYLDKVPE-----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQN 150
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+L+ + + DFGL+R+ Q + + V ++ Y APE +T D +S G
Sbjct: 151 ILVTSSGQIKLADFGLARIYS----FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 762 ILMLEMFTGK 771
+ EMF K
Sbjct: 207 CIFAEMFRRK 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 31/257 (12%)
Query: 587 VAVKVLDLQQRGASK-SFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK+L K + ++E + + + +H N+V ++ +C T G ++ E+
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC----THGGPV-LVITEYCC 133
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS----------IVH 694
G L N+L +K P +IA A+ + LH + +H
Sbjct: 134 YGDLLNFLRRKSRVLETDPAF------AIANSTASTRDLLHFSSQVAQGMAFLASKNCIH 187
Query: 695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH 754
D+ NVLL N VA +GDFGL+R + ++S + + + ++APE +
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVKWMAPESIFDCVYTVQ 246
Query: 755 GDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQA 813
D +S+GIL+ E+F+ G P + +K K G ++ PA + +
Sbjct: 247 SDVWSYGILLWEIFSLGLNPYPGILVNS-KFYKLVKDGY-----QMAQPAFAPKNIYSIM 300
Query: 814 GIVKELQPNLRAKFHEI 830
L+P R F +I
Sbjct: 301 QACWALEPTHRPTFQQI 317
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 95
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 96 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 142
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S +T G++ Y+ PE + E H ++
Sbjct: 143 NLLLGSAGELKIADFGWS--VHAPSSRRTDLC---GTLDYLPPE---MIEGRMHDEKVDL 194
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 25/192 (13%)
Query: 588 AVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
A+K ++ Q +R ++ E + ++ + H LV + S + E +V + +
Sbjct: 44 AMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF-----QDEEDMFMVVDLLL 98
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
G L L Q + + KL + + L +A+D YL + I+H D+KP N+LL
Sbjct: 99 GGDLRYHLQQNVHFKEETVKLFICE-LVMALD------YLQNQ---RIIHRDMKPDNILL 148
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DEYSFG 761
D H+ DF ++ +L P +T + + G+ Y+APE + + + + D +S G
Sbjct: 149 DEHGHVHITDFNIAAML----PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLG 204
Query: 762 ILMLEMFTGKRP 773
+ E+ G+RP
Sbjct: 205 VTAYELLRGRRP 216
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
K +L + A ++ L++LH IV+ DLK N+LLD + + DFG+ + +
Sbjct: 115 KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK---E 168
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGKRPTDDMFEEGL 782
N T+ G+ Y+APE LG+ H D +SFG+L+ EM G+ P EE L
Sbjct: 169 NMLGDAKTNEFCGTPDYIAPEI-LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 227
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 42/241 (17%)
Query: 585 TNVAVKVLDLQQRGAS-KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
T VAVK+L + + ++E L+ + H +++K+ +CS + L+ E+
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-----DGPLLLIVEYA 108
Query: 644 PNGSLENWLNQKE------------------DEQNQRPKLNLMQRLSIAIDVANVLEYLH 685
GSL +L + D ++R L + +S A ++ ++YL
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER-ALTMGDLISFAWQISQGMQYL- 166
Query: 686 HHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY 745
+VH DL N+L+ + DFGLSR +++ S VK S G + ++
Sbjct: 167 --AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED------SXVKRSQGRIPVKW 218
Query: 746 GALGEV-----STHGDEYSFGILMLEMFT-GKRPTDDMFEEGLS--LHKYAKMGLPDQVA 797
A+ + +T D +SFG+L+ E+ T G P + E L L +M PD +
Sbjct: 219 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCS 278
Query: 798 E 798
E
Sbjct: 279 E 279
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK +DL+++ + E +R +H N+V++ S G+E +V EF+ G
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV----GDEL-WVVMEFLEGG 102
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L + + ++N Q ++ + V L LH ++H D+K ++LL +
Sbjct: 103 ALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTH 151
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ + DFG + P + + G+ ++APE + D +S GI+++E
Sbjct: 152 DGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 208
Query: 767 MFTGKRP 773
M G+ P
Sbjct: 209 MVDGEPP 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK +DL+++ + E +R +H N+V++ S G+E +V EF+ G
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV----GDEL-WVVMEFLEGG 111
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L + + ++N Q ++ + V L LH ++H D+K ++LL +
Sbjct: 112 ALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTH 160
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ + DFG + P + + G+ ++APE + D +S GI+++E
Sbjct: 161 DGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 217
Query: 767 MFTGKRP 773
M G+ P
Sbjct: 218 MVDGEPP 224
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 33/186 (17%)
Query: 601 KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQN 660
+ F E + ++ H N+VK+ + +V EF+P G L + L K
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR-------MVMEFVPCGDLYHRLLDKAHPIK 120
Query: 661 QRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN-----EMVAHVGDF 715
KL LM +D+A +EY+ + + IVH DL+ N+ L + + A V DF
Sbjct: 121 WSVKLRLM------LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 716 GLSRLLHDNSPDQTSTSRVKGSIG---YVAPE-YGALGEVSTH-GDEYSFGILMLEMFTG 770
GLS Q S V G +G ++APE GA E T D YSF +++ + TG
Sbjct: 174 GLS---------QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
Query: 771 KRPTDD 776
+ P D+
Sbjct: 225 EGPFDE 230
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK +DL+++ + E +R +H N+V++ S G+E +V EF+ G
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV----GDEL-WVVMEFLEGG 113
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L + + ++N Q ++ + V L LH ++H D+K ++LL +
Sbjct: 114 ALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTH 162
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ + DFG + P + + G+ ++APE + D +S GI+++E
Sbjct: 163 DGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 219
Query: 767 MFTGKRP 773
M G+ P
Sbjct: 220 MVDGEPP 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
K +L + A ++ L++LH IV+ DLK N+LLD + + DFG+ + +
Sbjct: 114 KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK---E 167
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGKRPTDDMFEEGL 782
N T+ G+ Y+APE LG+ H D +SFG+L+ EM G+ P EE L
Sbjct: 168 NMLGDAKTNXFCGTPDYIAPEI-LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 226
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK +DL+++ + E +R +H N+V++ S G+E +V EF+ G
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY----LVGDEL-WVVMEFLEGG 106
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L + + ++N Q ++ + V L LH ++H D+K ++LL +
Sbjct: 107 ALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTH 155
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ + DFG + P + + G+ ++APE + D +S GI+++E
Sbjct: 156 DGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 212
Query: 767 MFTGKRP 773
M G+ P
Sbjct: 213 MVDGEPP 219
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 42/241 (17%)
Query: 585 TNVAVKVLDLQQRGAS-KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
T VAVK+L + + ++E L+ + H +++K+ +CS + L+ E+
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-----DGPLLLIVEYA 108
Query: 644 PNGSLENWLNQKE------------------DEQNQRPKLNLMQRLSIAIDVANVLEYLH 685
GSL +L + D ++R L + +S A ++ ++YL
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER-ALTMGDLISFAWQISQGMQYL- 166
Query: 686 HHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY 745
+VH DL N+L+ + DFGLSR +++ S VK S G + ++
Sbjct: 167 --AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED------SYVKRSQGRIPVKW 218
Query: 746 GALGEV-----STHGDEYSFGILMLEMFT-GKRPTDDMFEEGLS--LHKYAKMGLPDQVA 797
A+ + +T D +SFG+L+ E+ T G P + E L L +M PD +
Sbjct: 219 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCS 278
Query: 798 E 798
E
Sbjct: 279 E 279
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 19/174 (10%)
Query: 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
LV ++ G L L++ ED + + + IAID + L Y+H D+
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR---------DI 201
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY-----GALGEVS 752
KP N+L+D + DFG L ++ Q+S + G+ Y++PE G G
Sbjct: 202 KPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VGTPDYISPEILQAMEGGKGRYG 259
Query: 753 THGDEYSFGILMLEMFTGKRP--TDDMFEE-GLSLHKYAKMGLPDQVAEIIDPA 803
D +S G+ M EM G+ P + + E G ++ + P QV ++ + A
Sbjct: 260 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENA 313
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 93
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 94 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 140
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + +FG S +H S +T+ G++ Y+ PE + E H ++
Sbjct: 141 NLLLGSAGELKIANFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 192
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK +DL+++ + E +R +H N+V++ S G+E +V EF+ G
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV----GDEL-WVVMEFLEGG 156
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L + + ++N Q ++ + V L LH ++H D+K ++LL +
Sbjct: 157 ALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTH 205
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ + DFG + P + + G+ ++APE + D +S GI+++E
Sbjct: 206 DGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 262
Query: 767 MFTGKRP 773
M G+ P
Sbjct: 263 MVDGEPP 269
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 90
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + ++AN L Y CH+ ++H D+KP
Sbjct: 91 PLGTVYRELQKLSKFDEQRT---------ATYITELANALSY----CHSKRVIHRDIKPE 137
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S + + G++ Y+ PE + E H D
Sbjct: 138 NLLLGSAGELKIADFGWS--VHAPSSRRAALC---GTLDYLPPE---MIEGRMHDEKVDL 189
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 25/254 (9%)
Query: 587 VAVKVLDLQQRGASK-SFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK+L K + ++E + + + +H N+V ++ +C T G ++ E+
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC----THGGPV-LVITEYCC 133
Query: 645 NGSLENWLNQKEDEQNQRPK-------LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
G L N+L +K P L+ L + VA + +L + +H D+
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDV 190
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
NVLL N VA +GDFGL+R + ++S + + + ++APE + D
Sbjct: 191 AARNVLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 758 YSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIV 816
+S+GIL+ E+F+ G P + +K K G ++ PA + +
Sbjct: 250 WSYGILLWEIFSLGLNPYPGILVNS-KFYKLVKDGY-----QMAQPAFAPKNIYSIMQAC 303
Query: 817 KELQPNLRAKFHEI 830
L+P R F +I
Sbjct: 304 WALEPTHRPTFQQI 317
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+A L + H N+V+++ C++ T LV+E + + L +L++ P
Sbjct: 54 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPP-----P 107
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
L + L++LH +C IVH DLKP N+L+ + + DFGL+R+
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS- 163
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGK 771
Q + V ++ Y APE +T D +S G + EMF K
Sbjct: 164 ---YQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 38/200 (19%)
Query: 587 VAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK++D Q +S + E ++ + H N+VK+ I+T + LV E+
Sbjct: 35 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF---EVIETEKTLY--LVMEYAS 89
Query: 645 NGSL------ENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDL 697
G + W+ +KE R ++ +Q +CH IVH DL
Sbjct: 90 GGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ-----------------YCHQKFIVHRDL 132
Query: 698 KPSNVLLDNEMVAHVGDFGLS-RLLHDNSPDQTSTSRVKGSIGYVAPE-YGALGEVSTHG 755
K N+LLD +M + DFG S N D GS Y APE +
Sbjct: 133 KAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAPELFQGKKYDGPEV 187
Query: 756 DEYSFGILMLEMFTGKRPTD 775
D +S G+++ + +G P D
Sbjct: 188 DVWSLGVILYTLVSGSLPFD 207
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+++
Sbjct: 41 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-SMDLKDF 94
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 95 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 146
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 147 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 203 RRALFPGDSEIDQLFRI--FRTLGTPDEV 229
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+++
Sbjct: 38 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKDF 91
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 92 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIK 143
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 144 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 200 RRALFPGDSEIDQLFRI--FRTLGTPDEV 226
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S + S V
Sbjct: 137 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV- 192
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
K Q + A +++ L +LH I++ DLK NV+LD+E + DFG+ + +
Sbjct: 116 KFKEPQAVFYAAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---E 169
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGL 782
+ D +T G+ Y+APE A D +++G+L+ EM G+ P D E+ L
Sbjct: 170 HMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 588 AVKVLDLQQRGA---------SKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEFKA 637
AVK++D+ G+ ++ + E + LR + H N++++ + + N F
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET-----NTFFF 100
Query: 638 LVYEFMPNGSLENWLNQKE--DEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
LV++ M G L ++L +K E+ R + + + A+ N IVH
Sbjct: 101 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------------IVHR 148
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DLKP N+LLD++M + DFG S L P + S V G+ Y+APE H
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLRS-VCGTPSYLAPEIIECSMNDNHP 204
Query: 756 ------DEYSFGILMLEMFTGKRP 773
D +S G++M + G P
Sbjct: 205 GYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+++
Sbjct: 40 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-SMDLKDF 93
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 94 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 145
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 146 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 202 RRALFPGDSEIDQLFRI--FRTLGTPDEV 228
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 588 AVKVLDLQQRGASKSFIAEC-EALRSIRH--RNLV---KIITSCSSIDTRGNEFKALVYE 641
AVK++++ S + E EA R H R + IIT S ++ + F LV++
Sbjct: 123 AVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES--SSFMFLVFD 180
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
M G L ++L +K L+ + SI + + +LH + +IVH DLKP N
Sbjct: 181 LMRKGELFDYLTEK-------VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPEN 230
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG------ 755
+LLD+ M + DFG S L + G+ GY+APE TH
Sbjct: 231 ILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPGYLAPEILKCSMDETHPGYGKEV 286
Query: 756 DEYSFGILMLEMFTGKRP 773
D ++ G+++ + G P
Sbjct: 287 DLWACGVILFTLLAGSPP 304
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 42 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 95
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 96 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 147
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 148 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 203
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 204 RRALFPGDSEIDQLFRI--FRTLGTPDEV 230
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 39 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 92
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 93 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 144
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 145 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 201 RRALFPGDSEIDQLFRI--FRTLGTPDEV 227
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S + S V
Sbjct: 141 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV- 196
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 93
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 94 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 140
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S + + G++ Y+ PE + E H ++
Sbjct: 141 NLLLGSAGELKIADFGWS--VHAPSSRRAALC---GTLDYLPPE---MIEGRMHDEKVDL 192
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 41 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 94
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 95 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 146
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 147 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 203 RRALFPGDSEIDQLFRI--FRTLGTPDEV 229
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 40 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 93
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 94 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 145
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 146 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 202 RRALFPGDSEIDQLFRI--FRTLGTPDEV 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 39/204 (19%)
Query: 588 AVKVLDLQQRGA---------SKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEFKA 637
AVK++D+ G+ ++ + E + LR + H N++++ + + N F
Sbjct: 33 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET-----NTFFF 87
Query: 638 LVYEFMPNGSLENWLNQKE--DEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
LV++ M G L ++L +K E+ R + + + A+ N IVH
Sbjct: 88 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------------IVHR 135
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DLKP N+LLD++M + DFG S L V G+ Y+APE H
Sbjct: 136 DLKPENILLDDDMNIKLTDFGFSCQLDPGE----KLREVCGTPSYLAPEIIECSMNDNHP 191
Query: 756 ------DEYSFGILMLEMFTGKRP 773
D +S G++M + G P
Sbjct: 192 GYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
VAVK +DL+++ + E +R +H N+V++ S G+E +V EF+ G
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV----GDEL-WVVMEFLEGG 233
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L + + ++N Q ++ + V L LH ++H D+K ++LL +
Sbjct: 234 ALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTH 282
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLE 766
+ + DFG + P + + G+ ++APE + D +S GI+++E
Sbjct: 283 DGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 339
Query: 767 MFTGKRP 773
M G+ P
Sbjct: 340 MVDGEPP 346
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 90
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + ++AN L Y CH+ ++H D+KP
Sbjct: 91 PLGTVYRELQKLSKFDEQRT---------ATYITELANALSY----CHSKRVIHRDIKPE 137
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S + + G++ Y+ PE + E H D
Sbjct: 138 NLLLGSAGELKIADFGWS--VHAPS---SRRXXLCGTLDYLPPE---MIEGRMHDEKVDL 189
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 41 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKTF 94
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 95 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 146
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 147 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 203 RRALFPGDSEIDQLFRI--FRTLGTPDEV 229
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 92
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 93 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 139
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + +FG S +H S +T+ G++ Y+ PE + E H ++
Sbjct: 140 NLLLGSAGELKIANFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDL 191
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 37 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 90
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 91 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 142
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 143 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 199 RRALFPGDSEIDQLFRI--FRTLGTPDEV 225
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 118 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 173
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 41 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 94
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 95 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 146
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 147 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 203 RRALFPGDSEIDQLFRI--FRTLGTPDEV 229
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 38 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 91
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 92 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 143
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 144 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 200 RRALFPGDSEIDQLFRI--FRTLGTPDEV 226
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 38 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 91
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 92 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 143
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 144 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 200 RRALFPGDSEIDQLFRI--FRTLGTPDEV 226
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 38 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 91
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 92 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 143
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 144 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 200 RRALFPGDSEIDQLFRI--FRTLGTPDEV 226
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 117 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 172
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 40 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 93
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 94 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 145
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 146 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 202 RRALFPGDSEIDQLFRI--FRTLGTPDEV 228
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 116 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 171
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 39 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 92
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 93 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIK 144
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 145 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 201 RRALFPGDSEIDQLFRI--FRTLGTPDEV 227
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 38 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 91
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 92 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 143
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 144 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 200 RRALFPGDSEIDQLFRI--FRTLGTPDEV 226
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 115 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 170
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 30/216 (13%)
Query: 585 TNVAVKVLDLQQRGASKS-FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
T VAVK+L + ++ F E + + N+VK++ C+ + L++E+M
Sbjct: 78 TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV-----GKPMCLLFEYM 132
Query: 644 PNGSLENWLNQ---------KEDEQNQR--------PKLNLMQRLSIAIDVANVLEYLHH 686
G L +L + + R P L+ ++L IA VA + YL
Sbjct: 133 AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE 192
Query: 687 HCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKG-SIGYVAPEY 745
VH DL N L+ MV + DFGLSR ++ S D I ++ PE
Sbjct: 193 R---KFVHRDLATRNCLVGENMVVKIADFGLSRNIY--SADYYKADGNDAIPIRWMPPES 247
Query: 746 GALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEE 780
+T D +++G+++ E+F+ G +P M E
Sbjct: 248 IFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 283
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 28/195 (14%)
Query: 587 VAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK++D Q +S + E ++ + H N+VK+ I+T + LV E+
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF---EVIETEKTLY--LVMEYAS 96
Query: 645 NGSLENWL--NQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
G + ++L + + E+ R K + + ++Y H IVH DLK N+
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQYCHQKF---IVHRDLKAENL 144
Query: 703 LLDNEMVAHVGDFGLS-RLLHDNSPDQTSTSRVKGSIGYVAPE-YGALGEVSTHGDEYSF 760
LLD +M + DFG S N D GS Y APE + D +S
Sbjct: 145 LLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 761 GILMLEMFTGKRPTD 775
G+++ + +G P D
Sbjct: 200 GVILYTLVSGSLPFD 214
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 587 VAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VA+K + + F+ E +R H ++VK+I + T + ++ E
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTL 94
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L Q ++ L+L + A ++ L YL VH D+ NVL+
Sbjct: 95 GELRSFL------QVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS 145
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ +GDFGLSR + D++ + S ++ I ++APE ++ D + FG+ M
Sbjct: 146 SNDCVKLGDFGLSRYMEDSTXXKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 766 EMFT-GKRP 773
E+ G +P
Sbjct: 204 EILMHGVKP 212
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 37 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 90
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 91 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 142
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 143 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 199 RRALFPGDSEIDQLFRI--FRTLGTPDEV 225
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 40 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 93
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 94 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIK 145
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 146 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 202 RRALFPGDSEIDQLFRI--FRTLGTPDEV 228
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 39 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-HQDLKKF 92
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 93 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 144
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 145 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 201 RRALFPGDSEIDQLFRI--FRTLGTPDEV 227
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 22/196 (11%)
Query: 582 TEETNVAVKVLDLQ---QRGASKSFIAECEAL-RSIRHRNLVKIITSCSSIDTRGNEFKA 637
EE AVKVL + ++ K ++E L ++++H LV + S + D
Sbjct: 61 AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL-----Y 115
Query: 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
V +++ G L L Q +R L R A ++A+ L YLH +IV+ DL
Sbjct: 116 FVLDYINGGELFYHL------QRERCFLEPRARF-YAAEIASALGYLHS---LNIVYRDL 165
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
KP N+LLD++ + DFGL + +N ++TS G+ Y+APE D
Sbjct: 166 KPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDW 222
Query: 758 YSFGILMLEMFTGKRP 773
+ G ++ EM G P
Sbjct: 223 WCLGAVLYEMLYGLPP 238
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 93
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + ++AN L Y CH+ ++H D+KP
Sbjct: 94 PLGTVYRELQKLSKFDEQRT---------ATYITELANALSY----CHSKRVIHRDIKPE 140
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S + + G++ Y+ PE + E H D
Sbjct: 141 NLLLGSAGELKIADFGWS--VHAPS---SRRXXLCGTLDYLPPE---MIEGRMHDEKVDL 192
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A ++ LE LH IV+ DLKP N+LLD+ + D GL+ + + QT R
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QTIKGR 345
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
V G++GY+APE + D ++ G L+ EM G+ P
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A ++ LE LH IV+ DLKP N+LLD+ + D GL+ + + QT R
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QTIKGR 345
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
V G++GY+APE + D ++ G L+ EM G+ P
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 28/195 (14%)
Query: 587 VAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK++D Q +S + E ++ + H N+VK+ I+T + LV E+
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF---EVIETEKTLY--LVMEYAS 96
Query: 645 NGSLENWL--NQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
G + ++L + + E+ R K + + ++Y H IVH DLK N+
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQYCHQKF---IVHRDLKAENL 144
Query: 703 LLDNEMVAHVGDFGLS-RLLHDNSPDQTSTSRVKGSIGYVAPE-YGALGEVSTHGDEYSF 760
LLD +M + DFG S N D GS Y APE + D +S
Sbjct: 145 LLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 761 GILMLEMFTGKRPTD 775
G+++ + +G P D
Sbjct: 200 GVILYTLVSGSLPFD 214
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 39 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-SMDLKKF 92
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 93 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIK 144
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 145 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 201 RRALFPGDSEIDQLFRI--FRTLGTPDEV 227
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
Query: 587 VAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAV+++D Q +S + E ++ + H N+VK+ I+T + LV E+
Sbjct: 42 VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF---EVIETEKTLY--LVMEYAS 96
Query: 645 NGSLENWL--NQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
G + ++L + + E+ R K + + ++Y H IVH DLK N+
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQYCHQKF---IVHRDLKAENL 144
Query: 703 LLDNEMVAHVGDFGLS-RLLHDNSPDQTSTSRVKGSIGYVAPE-YGALGEVSTHGDEYSF 760
LLD +M + DFG S N D+ GS Y APE + D +S
Sbjct: 145 LLDADMNIKIADFGFSNEFTFGNKLDEFC-----GSPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 761 GILMLEMFTGKRPTD 775
G+++ + +G P D
Sbjct: 200 GVILYTLVSGSLPFD 214
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 91
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 92 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 138
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S + + G++ Y+ PE + E H ++
Sbjct: 139 NLLLGSAGELKIADFGWS--VHAPSSRRDTLC---GTLDYLPPE---MIEGRMHDEKVDL 190
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 39/204 (19%)
Query: 588 AVKVLDLQQRGA---------SKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEFKA 637
AVK++D+ G+ ++ + E + LR + H N++++ + + N F
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET-----NTFFF 100
Query: 638 LVYEFMPNGSLENWLNQKE--DEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695
LV++ M G L ++L +K E+ R + + + A+ N IVH
Sbjct: 101 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------------IVHR 148
Query: 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
DLKP N+LLD++M + DFG S L P + V G+ Y+APE H
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQL---DPGE-KLREVCGTPSYLAPEIIECSMNDNHP 204
Query: 756 ------DEYSFGILMLEMFTGKRP 773
D +S G++M + G P
Sbjct: 205 GYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 93
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + ++AN L Y CH+ ++H D+KP
Sbjct: 94 PLGTVYRELQKLSKFDEQRT---------ATYITELANALSY----CHSKRVIHRDIKPE 140
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S + + G++ Y+ PE + E H D
Sbjct: 141 NLLLGSAGELKIADFGWS--VHAPS---SRRDDLCGTLDYLPPE---MIEGRMHDEKVDL 192
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+EF+ + L+ +
Sbjct: 41 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEFL-SMDLKKF 94
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 95 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIK 146
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 147 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 203 RRALFPGDSEIDQLFRI--FRTLGTPDEV 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 193
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 195
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 193
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 195
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 195
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 122 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 177
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 145 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 200
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 195
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 193
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 141 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 196
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 195
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-STR----VYLILEYA 90
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 91 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKKVIHRDIKPE 137
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DE 757
N+LL + + DFG S +H S + + G++ Y+ PE + E H D
Sbjct: 138 NLLLGSAGELKIADFGWS--VHAPSSRRAALC---GTLDYLPPE---MIEGRMHDEKVDL 189
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + +++ + PD V E
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTE 231
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 92
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 93 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 139
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S + + G++ Y+ PE + E H ++
Sbjct: 140 NLLLGSAGELKIADFGWS--VHAPS---SRRXXLCGTLDYLPPE---MIEGRMHDEKVDL 191
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV 751
I++ DLK NV+LD+E + DFG+ + +N D +T G+ Y+APE A
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 752 STHGDEYSFGILMLEMFTGKRP 773
D ++FG+L+ EM G+ P
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAP 220
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANAFV 193
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 137 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 192
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + LEYLH I+H DLKP N+LL+ +M + DFG +++L S Q +
Sbjct: 143 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFV 198
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ YV+PE D ++ G ++ ++ G P
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 587 VAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VA+K + + F+ E +R H ++VK+I + T + ++ E
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTL 122
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L Q ++ L+L + A ++ L YL VH D+ NVL+
Sbjct: 123 GELRSFL------QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS 173
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ +GDFGLSR + D++ S+ K I ++APE ++ D + FG+ M
Sbjct: 174 SNDCVKLGDFGLSRYMEDST--YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 231
Query: 766 EMFT-GKRP 773
E+ G +P
Sbjct: 232 EILMHGVKP 240
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
LV ++ G L L++ ED+ + + + +AID + L Y VH D+
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY---------VHRDI 201
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY-----GALGEVS 752
KP NVLLD + DFG ++D+ Q+S + G+ Y++PE +G+
Sbjct: 202 KPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDGMGKYG 259
Query: 753 THGDEYSFGILMLEMFTGKRP 773
D +S G+ M EM G+ P
Sbjct: 260 PECDWWSLGVCMYEMLYGETP 280
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 587 VAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VA+K + + F+ E +R H ++VK+I + T + ++ E
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTL 94
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L Q ++ L+L + A ++ L YL VH D+ NVL+
Sbjct: 95 GELRSFL------QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS 145
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ +GDFGLSR + D++ S+ K I ++APE ++ D + FG+ M
Sbjct: 146 SNDCVKLGDFGLSRYMEDST--YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 766 EMFT-GKRP 773
E+ G +P
Sbjct: 204 EILMHGVKP 212
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
F + SL + +++ + + + + +S + VA +E+L +H DL N
Sbjct: 173 FQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARN 229
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL V + DFGL+R ++ N PD + + ++APE ST D +S+G
Sbjct: 230 ILLSENNVVKICDFGLARDIYKN-PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYG 288
Query: 762 ILMLEMFT 769
+L+ E+F+
Sbjct: 289 VLLWEIFS 296
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 587 VAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VA+K + + F+ E +R H ++VK+I + T + ++ E
Sbjct: 46 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTL 99
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L Q ++ L+L + A ++ L YL VH D+ NVL+
Sbjct: 100 GELRSFL------QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS 150
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ +GDFGLSR + D++ + S ++ I ++APE ++ D + FG+ M
Sbjct: 151 SNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMW 208
Query: 766 EMFT-GKRP 773
E+ G +P
Sbjct: 209 EILMHGVKP 217
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
LV ++ G L L++ ED+ + + + +AID + L Y VH D+
Sbjct: 167 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY---------VHRDI 217
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY-----GALGEVS 752
KP NVLLD + DFG ++D+ Q+S + G+ Y++PE +G+
Sbjct: 218 KPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDGMGKYG 275
Query: 753 THGDEYSFGILMLEMFTGKRP 773
D +S G+ M EM G+ P
Sbjct: 276 PECDWWSLGVCMYEMLYGETP 296
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 587 VAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VA+K + + F+ E +R H ++VK+I + T + ++ E
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTL 94
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L Q ++ L+L + A ++ L YL VH D+ NVL+
Sbjct: 95 GELRSFL------QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS 145
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ +GDFGLSR + D++ S+ K I ++APE ++ D + FG+ M
Sbjct: 146 SNDCVKLGDFGLSRYMEDST--YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 766 EMFT-GKRP 773
E+ G +P
Sbjct: 204 EILMHGVKP 212
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 33/186 (17%)
Query: 601 KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQN 660
+ F E + ++ H N+VK+ + +V EF+P G L + L K
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDLYHRLLDKAHPIK 120
Query: 661 QRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN-----EMVAHVGDF 715
KL LM +D+A +EY+ + + IVH DL+ N+ L + + A V DF
Sbjct: 121 WSVKLRLM------LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 716 GLSRLLHDNSPDQTSTSRVKGSIG---YVAPE-YGALGEVSTH-GDEYSFGILMLEMFTG 770
G S Q S V G +G ++APE GA E T D YSF +++ + TG
Sbjct: 174 GTS---------QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
Query: 771 KRPTDD 776
+ P D+
Sbjct: 225 EGPFDE 230
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 587 VAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VA+K + + F+ E +R H ++VK+I + T + ++ E
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTL 91
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L Q ++ L+L + A ++ L YL VH D+ NVL+
Sbjct: 92 GELRSFL------QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS 142
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ +GDFGLSR + D++ S+ K I ++APE ++ D + FG+ M
Sbjct: 143 SNDCVKLGDFGLSRYMEDST--YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 200
Query: 766 EMFT-GKRP 773
E+ G +P
Sbjct: 201 EILMHGVKP 209
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV 751
I++ DLK NV+LD+E + DFG+ + +N D +T G+ Y+APE A
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 752 STHGDEYSFGILMLEMFTGKRP-----TDDMFE 779
D ++FG+L+ EM G+ P D++F+
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 552
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TRV----YLILEYA 116
Query: 644 PNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPS 700
P G++ L + K DEQ + + ++AN L Y CH+ ++H D+KP
Sbjct: 117 PLGTVYRELQKLSKFDEQ---------RTATYITELANALSY----CHSKRVIHRDIKPE 163
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE--- 757
N+LL + + DFG S +H S + + G++ Y+ PE + E H ++
Sbjct: 164 NLLLGSAGELKIADFGWS--VHAPS---SRRDDLCGTLDYLPPE---MIEGRMHDEKVDL 215
Query: 758 YSFGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
+S G+L E GK P + + ++E + PD V E
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 587 VAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VA+K + + F+ E +R H ++VK+I + T + ++ E
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTL 96
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L Q ++ L+L + A ++ L YL VH D+ NVL+
Sbjct: 97 GELRSFL------QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS 147
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ +GDFGLSR + D++ S+ K I ++APE ++ D + FG+ M
Sbjct: 148 SNDCVKLGDFGLSRYMEDST--YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 205
Query: 766 EMFT-GKRP 773
E+ G +P
Sbjct: 206 EILMHGVKP 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 587 VAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VA+K + + F+ E +R H ++VK+I + T + ++ E
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTL 97
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L Q ++ L+L + A ++ L YL VH D+ NVL+
Sbjct: 98 GELRSFL------QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS 148
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+ +GDFGLSR + D++ + S ++ I ++APE ++ D + FG+ M
Sbjct: 149 SNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMW 206
Query: 766 EMFT-GKRP 773
E+ G +P
Sbjct: 207 EILMHGVKP 215
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 28/195 (14%)
Query: 587 VAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK++D Q +S + E ++ + H N+VK+ I+T + LV E+
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF---EVIETEKTLY--LVMEYAS 96
Query: 645 NGSLENWL--NQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
G + ++L + + E+ R K + + ++Y H IVH DLK N+
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQYCHQKF---IVHRDLKAENL 144
Query: 703 LLDNEMVAHVGDFGLS-RLLHDNSPDQTSTSRVKGSIGYVAPE-YGALGEVSTHGDEYSF 760
LLD +M + DFG S N D G+ Y APE + D +S
Sbjct: 145 LLDADMNIKIADFGFSNEFTFGNKLDAFC-----GAPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 761 GILMLEMFTGKRPTD 775
G+++ + +G P D
Sbjct: 200 GVILYTLVSGSLPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 28/195 (14%)
Query: 587 VAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAV+++D Q +S + E ++ + H N+VK+ I+T + LV E+
Sbjct: 42 VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF---EVIETEKTLY--LVMEYAS 96
Query: 645 NGSLENWL--NQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
G + ++L + + E+ R K + + ++Y H IVH DLK N+
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQYCHQKF---IVHRDLKAENL 144
Query: 703 LLDNEMVAHVGDFGLS-RLLHDNSPDQTSTSRVKGSIGYVAPE-YGALGEVSTHGDEYSF 760
LLD +M + DFG S N D GS Y APE + D +S
Sbjct: 145 LLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 761 GILMLEMFTGKRPTD 775
G+++ + +G P D
Sbjct: 200 GVILYTLVSGSLPFD 214
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 33/186 (17%)
Query: 601 KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQN 660
+ F E + ++ H N+VK+ + +V EF+P G L + L K
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR-------MVMEFVPCGDLYHRLLDKAHPIK 120
Query: 661 QRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN-----EMVAHVGDF 715
KL LM +D+A +EY+ + + IVH DL+ N+ L + + A V DF
Sbjct: 121 WSVKLRLM------LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 716 GLSRLLHDNSPDQTSTSRVKGSIG---YVAPE-YGALGEVSTH-GDEYSFGILMLEMFTG 770
LS Q S V G +G ++APE GA E T D YSF +++ + TG
Sbjct: 174 SLS---------QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
Query: 771 KRPTDD 776
+ P D+
Sbjct: 225 EGPFDE 230
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 32/220 (14%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 94
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPSNV 702
P G++ L + QR + ++AN L Y CH+ ++H D+KP N+
Sbjct: 95 PLGTVYRELQKLSRFDEQRTA-------TYITELANALSY----CHSKRVIHRDIKPENL 143
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DEYS 759
LL + + DFG S +H S +T+ G++ Y+ PE + E H D +S
Sbjct: 144 LLGSNGELKIADFGWS--VHAPSSRRTTLC---GTLDYLPPE---MIEGRMHDEKVDLWS 195
Query: 760 FGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
G+L E G P + ++E + PD V E
Sbjct: 196 LGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTE 235
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+E + + L+ +
Sbjct: 37 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEHV-HQDLKTF 90
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 91 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 142
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T T V ++ Y APE LG ST D +S G + EM T
Sbjct: 143 LADFGLARAF--GVPVRTYTHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 199 RRALFPGDSEIDQLFRI--FRTLGTPDEV 225
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 657 DEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716
DE N P + + + + LE+LH +I++ DLKP NVLLD++ + D G
Sbjct: 280 DEDN--PGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLG 334
Query: 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
L+ L QT T G+ G++APE E D ++ G+ + EM + P
Sbjct: 335 LAVELKAG---QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 657 DEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716
DE N P + + + + LE+LH +I++ DLKP NVLLD++ + D G
Sbjct: 280 DEDN--PGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLG 334
Query: 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
L+ L QT T G+ G++APE E D ++ G+ + EM + P
Sbjct: 335 LAVELKAG---QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 657 DEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716
DE N P + + + + LE+LH +I++ DLKP NVLLD++ + D G
Sbjct: 280 DEDN--PGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLG 334
Query: 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
L+ L QT T G+ G++APE E D ++ G+ + EM + P
Sbjct: 335 LAVELKAG---QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 657 DEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716
DE N P + + + + LE+LH +I++ DLKP NVLLD++ + D G
Sbjct: 280 DEDN--PGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLG 334
Query: 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
L+ L QT T G+ G++APE E D ++ G+ + EM + P
Sbjct: 335 LAVELKAG---QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 35/182 (19%)
Query: 599 ASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDE 658
K + E + L+ +RH NLV ++ C + + LV+EF+ + L++
Sbjct: 67 VKKIAMREIKLLKQLRHENLVNLLEVC-----KKKKRWYLVFEFVDHTILDD-------- 113
Query: 659 QNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHT-SIVHCDLKPSNVLLDNEMVAH 711
++ +D V +YL CH+ +I+H D+KP N+L+ V
Sbjct: 114 ---------LELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVK 164
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG--DEYSFGILMLEMFT 769
+ DFG +R L +P + V + Y APE +G+V D ++ G L+ EMF
Sbjct: 165 LCDFGFARTL--AAPGEVYDDEV-ATRWYRAPEL-LVGDVKYGKAVDVWAIGCLVTEMFM 220
Query: 770 GK 771
G+
Sbjct: 221 GE 222
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 601 KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQN 660
+ F+ E +R H ++VK+I + ++ E G L ++L Q
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPV------WIIMELCTLGELRSFL------QV 483
Query: 661 QRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL 720
++ L+L + A ++ L YL VH D+ NVL+ + +GDFGLSR
Sbjct: 484 RKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540
Query: 721 LHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRP 773
+ D++ S+ K I ++APE ++ D + FG+ M E+ G +P
Sbjct: 541 MEDST--YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 587 VAVKVL-DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
VA+K + + F+ E +R H ++VK+I + T + ++ E
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTL 94
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L Q ++ L+L + A ++ L YL VH D+ NVL+
Sbjct: 95 GELRSFL------QVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS 145
Query: 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILML 765
+GDFGLSR + D++ S+ K I ++APE ++ D + FG+ M
Sbjct: 146 ATDCVKLGDFGLSRYMEDST--YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 766 EMFT-GKRP 773
E+ G +P
Sbjct: 204 EILMHGVKP 212
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
F+ SL + ++ E + L L + + VA +E+L +H DL N
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 221
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL + V + DFGL+R ++ + PD + + ++APE + D +SFG
Sbjct: 222 ILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 280
Query: 762 ILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGI 815
+L+ E+F+ G P D+ F L + +M PD P + + L+ G
Sbjct: 281 VLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMYQTMLDCWHG- 333
Query: 816 VKELQPNLRAKFHEI 830
+P+ R F E+
Sbjct: 334 ----EPSQRPTFSEL 344
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 33/200 (16%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+ A+K + + + + F E E L + H N++ ++ +C + RG + A+ E+
Sbjct: 54 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC---EHRGYLYLAI--EYA 108
Query: 644 PNGSLENWLNQKED---------EQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVH 694
P+G+L ++L + + L+ Q L A DVA ++YL +H
Sbjct: 109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIH 165
Query: 695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV--- 751
DL N+L+ VA + DFGLSR VK ++G + + A+ +
Sbjct: 166 RDLAARNILVGENYVAKIADFGLSR---------GQEVYVKKTMGRLPVRWMAIESLNYS 216
Query: 752 --STHGDEYSFGILMLEMFT 769
+T+ D +S+G+L+ E+ +
Sbjct: 217 VYTTNSDVWSYGVLLWEIVS 236
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 41/224 (18%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRS--IRHRNLVKIITSCSSIDTRGNEFKA---LVYE 641
VAVK+ LQ + +S+ +E E + ++H NL++ I + + RG+ + L+
Sbjct: 41 VAVKIFPLQDK---QSWQSEREIFSTPGMKHENLLQFIAA----EKRGSNLEVELWLITA 93
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH---HCH-----TSIV 693
F GSL ++L N+ +A ++ L YLH C SI
Sbjct: 94 FHDKGSLTDYLKGNIITWNEL--------CHVAETMSRGLSYLHEDVPWCRGEGHKPSIA 145
Query: 694 HCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY--GALG-- 749
H D K NVLL +++ A + DFGL+ P + +V G+ Y+APE GA+
Sbjct: 146 HRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV-GTRRYMAPEVLEGAINFQ 204
Query: 750 -EVSTHGDEYSFGILMLEMFTGKR----PTDDM---FEEGLSLH 785
+ D Y+ G+++ E+ + + P D+ FEE + H
Sbjct: 205 RDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQH 248
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 33/200 (16%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+ A+K + + + + F E E L + H N++ ++ +C + RG + A+ E+
Sbjct: 44 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC---EHRGYLYLAI--EYA 98
Query: 644 PNGSLENWLNQKED---------EQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVH 694
P+G+L ++L + + L+ Q L A DVA ++YL +H
Sbjct: 99 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIH 155
Query: 695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV--- 751
DL N+L+ VA + DFGLSR VK ++G + + A+ +
Sbjct: 156 RDLAARNILVGENYVAKIADFGLSR---------GQEVYVKKTMGRLPVRWMAIESLNYS 206
Query: 752 --STHGDEYSFGILMLEMFT 769
+T+ D +S+G+L+ E+ +
Sbjct: 207 VYTTNSDVWSYGVLLWEIVS 226
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
F+ SL + ++ E + L L + + VA +E+L +H DL N
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 223
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL + V + DFGL+R ++ + PD + + ++APE + D +SFG
Sbjct: 224 ILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 282
Query: 762 ILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGI 815
+L+ E+F+ G P D+ F L + +M PD P + + L+ G
Sbjct: 283 VLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMYQTMLDCWHG- 335
Query: 816 VKELQPNLRAKFHEI 830
+P+ R F E+
Sbjct: 336 ----EPSQRPTFSEL 346
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ + R + L+ EF
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY---NYFHDRKRIY--LMLEFA 96
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNV 702
P G L L QK +++ M+ L+ A+ H+CH ++H D+KP N+
Sbjct: 97 PRGELYKEL-QKHGRFDEQRSATFMEELADAL----------HYCHERKVIHRDIKPENL 145
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DEYS 759
L+ + + DFG S +H S + G++ Y+ PE + E TH D +
Sbjct: 146 LMGYKGELKIADFGWS--VHAPSLRRRXMC---GTLDYLPPE---MIEGKTHDEKVDLWC 197
Query: 760 FGILMLEMFTGKRPTD 775
G+L E G P D
Sbjct: 198 AGVLCYEFLVGMPPFD 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ + R + L+ EF
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY---NYFHDRKRIY--LMLEFA 96
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNV 702
P G L L QK +++ M+ L+ A+ H+CH ++H D+KP N+
Sbjct: 97 PRGELYKEL-QKHGRFDEQRSATFMEELADAL----------HYCHERKVIHRDIKPENL 145
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DEYS 759
L+ + + DFG S +H S + G++ Y+ PE + E TH D +
Sbjct: 146 LMGYKGELKIADFGWS--VHAPSLRRRXMC---GTLDYLPPE---MIEGKTHDEKVDLWC 197
Query: 760 FGILMLEMFTGKRPTD 775
G+L E G P D
Sbjct: 198 AGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ + R + L+ EF
Sbjct: 43 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY---NYFHDRKRIY--LMLEFA 97
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNV 702
P G L L QK +++ M+ L+ A+ H+CH ++H D+KP N+
Sbjct: 98 PRGELYKEL-QKHGRFDEQRSATFMEELADAL----------HYCHERKVIHRDIKPENL 146
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DEYS 759
L+ + + DFG S +H S + G++ Y+ PE + E TH D +
Sbjct: 147 LMGYKGELKIADFGWS--VHAPSLRRRXMC---GTLDYLPPE---MIEGKTHDEKVDLWC 198
Query: 760 FGILMLEMFTGKRPTD 775
G+L E G P D
Sbjct: 199 AGVLCYEFLVGMPPFD 214
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 118/279 (42%), Gaps = 52/279 (18%)
Query: 605 AECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPK 664
E E L+ + H ++KI + D +V E M G L + + + + K
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCK 256
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGDFGLSRLL 721
L Q L ++YLH + I+H DLKP NVLL + + + + DFG S++L
Sbjct: 257 LYFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 306
Query: 722 HDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-----DEYSFGILMLEMFTGKRPTDD 776
+ S +T + G+ Y+APE L V T G D +S G+++ +G P
Sbjct: 307 GETSLMRT----LCGTPTYLAPE--VLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--- 357
Query: 777 MFEEGLSLHKYAKMGLPDQVAE---IIDPAILEEALEIQAGIVKEL---QPNLRAKFHEI 830
S H+ ++ L DQ+ P + E E +VK+L P R E
Sbjct: 358 -----FSEHR-TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE- 410
Query: 831 QVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQAI 869
LR L E++ R K QD + E E+ + Q +
Sbjct: 411 ---ALRHPWLQDEDMKR---KFQDLLSEENESTALPQVL 443
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS-RLLHDN 724
++ ++++AI L YL ++H D+KPSN+LLD + DFG+S RL+ D
Sbjct: 124 RILGKMTVAI--VKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179
Query: 725 SPDQTSTSRVKGSIGYVAPEY-----GALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ D+++ G Y+APE + D +S GI ++E+ TG+ P
Sbjct: 180 AKDRSA-----GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
F+ SL + ++ E + L L + + VA +E+L +H DL N
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 228
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL + V + DFGL+R ++ + PD + + ++APE + D +SFG
Sbjct: 229 ILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 287
Query: 762 ILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGI 815
+L+ E+F+ G P D+ F L + +M PD P + + L+ G
Sbjct: 288 VLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMYQTMLDCWHG- 340
Query: 816 VKELQPNLRAKFHEI 830
+P+ R F E+
Sbjct: 341 ----EPSQRPTFSEL 351
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 18/174 (10%)
Query: 601 KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQN 660
+ F+ E +R H ++VK+I + ++ E G L ++L Q
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPV------WIIMELCTLGELRSFL------QV 483
Query: 661 QRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL 720
++ L+L + A ++ L YL VH D+ NVL+ +GDFGLSR
Sbjct: 484 RKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRY 540
Query: 721 LHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRP 773
+ D++ S+ K I ++APE ++ D + FG+ M E+ G +P
Sbjct: 541 MEDST--YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
F+ SL + ++ E + L L + + VA +E+L +H DL N
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 230
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+LL + V + DFGL+R ++ + PD + + ++APE + D +SFG
Sbjct: 231 ILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 289
Query: 762 ILMLEMFT-GKRP-----TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGI 815
+L+ E+F+ G P D+ F L + +M PD P + + L+ G
Sbjct: 290 VLLWEIFSLGASPYPGVKIDEEF--CRRLKEGTRMRAPDYTT----PEMYQTMLDCWHG- 342
Query: 816 VKELQPNLRAKFHEI 830
+P+ R F E+
Sbjct: 343 ----EPSQRPTFSEL 353
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 30 TEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH-----RREGNIQYLFL 83
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 84 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 130
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 190 VWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 31 TEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH-----RREGNIQYLFL 84
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 131
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELLKRREFHAEPVD 190
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 191 VWSCGIVLTAMLAGELPWD 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 26/194 (13%)
Query: 587 VAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK++D Q + + E ++ + H N+VK+ I+T + LV E+
Sbjct: 43 VAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF---EVIETEKTLY--LVMEYAS 97
Query: 645 NGSLENWL--NQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
G + ++L + + E+ R K + + ++Y H IVH DLK N+
Sbjct: 98 GGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQYCHQKY---IVHRDLKAENL 145
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE-YGALGEVSTHGDEYSFG 761
LLD +M + DFG S + T GS Y APE + D +S G
Sbjct: 146 LLDGDMNIKIADFGFSNEFTVGNKLDTFC----GSPPYAAPELFQGKKYDGPEVDVWSLG 201
Query: 762 ILMLEMFTGKRPTD 775
+++ + +G P D
Sbjct: 202 VILYTLVSGSLPFD 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V +++L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 75 EKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 128
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 129 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 179
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 180 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 237
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 238 SYGVTVWELMTFGSKPYD 255
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKA-LVYEFMPNGSLENWLNQKEDEQNQRPK 664
E + R H N+++++ C + RG + +A L+ F G+L N + + +D+ N
Sbjct: 76 EADMHRLFNHPNILRLVAYC--LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN---F 130
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL--SRLLH 722
L Q L + + + LE +H H DLKP+N+LL +E + D G +H
Sbjct: 131 LTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187
Query: 723 DNSPDQTST----SRVKGSIGYVAPEYGALGEVSTH------GDEYSFGILMLEMFTGKR 772
Q T + + +I Y APE L V +H D +S G ++ M G+
Sbjct: 188 VEGSRQALTLQDWAAQRCTISYRAPE---LFSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244
Query: 773 PTDDMFEEGLSL 784
P D +F++G S+
Sbjct: 245 PYDMVFQKGDSV 256
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 26/167 (15%)
Query: 613 IRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLS 672
+ RN VK +T+ T + E+ NG+L + ++ + Q + L ++
Sbjct: 72 LERRNFVKPMTAVKKKSTL-----FIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ-- 124
Query: 673 IAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLH--------DN 724
+ L Y+H I+H DLKP N+ +D +GDFGL++ +H D+
Sbjct: 125 ----ILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 725 SPDQTSTSRVKGSIG---YVAPEY-GALGEVSTHGDEYSFGILMLEM 767
S+ + +IG YVA E G + D YS GI+ EM
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSL-ENWLNQKEDEQNQRPK 664
E L+S+ H N++K+ ++ LV EF G L E +N R K
Sbjct: 96 EISLLKSLDHPNIIKLFDVFED-----KKYFYLVTEFYEGGELFEQIIN--------RHK 142
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE---MVAHVGDFGLSRLL 721
+ +I + + + YLH H +IVH D+KP N+LL+N+ + + DFGLS
Sbjct: 143 FDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
Query: 722 HDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
S D R+ G+ Y+APE + + D +S G++M + G P
Sbjct: 200 ---SKDYKLRDRL-GTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD + G + I E L+ + H N+VK++ I T + LV+E + + L+ +
Sbjct: 41 LDTETEGVPSTAIREISLLKELNHPNIVKLL---DVIHTENKLY--LVFEHV-DQDLKKF 94
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
++ P + S + L + H H ++H DLKP N+L++ E
Sbjct: 95 MDASALTGIPLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIK 146
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFT 769
+ DFGL+R P +T V ++ Y APE LG ST D +S G + EM T
Sbjct: 147 LADFGLARAF--GVPVRTYXHEVV-TLWYRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 770 GKR--PTDDMFEEGLSLHKYAKMGLPDQV 796
+ P D ++ + + +G PD+V
Sbjct: 203 RRALFPGDSEIDQLFRI--FRTLGTPDEV 229
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 26/194 (13%)
Query: 587 VAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VA+K++D Q + + E ++ + H N+VK+ I+T + L+ E+
Sbjct: 40 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF---EVIETEKTLY--LIMEYAS 94
Query: 645 NGSLENWL--NQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
G + ++L + + E+ R K + + ++Y H IVH DLK N+
Sbjct: 95 GGEVFDYLVAHGRMKEKEARSKFR---------QIVSAVQYCHQ---KRIVHRDLKAENL 142
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE-YGALGEVSTHGDEYSFG 761
LLD +M + DFG S T GS Y APE + D +S G
Sbjct: 143 LLDADMNIKIADFGFSNEFTVGGKLDTFC----GSPPYAAPELFQGKKYDGPEVDVWSLG 198
Query: 762 ILMLEMFTGKRPTD 775
+++ + +G P D
Sbjct: 199 VILYTLVSGSLPFD 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 32/255 (12%)
Query: 586 NVAVK--VLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA---LVY 640
VA+K +++ ++ G + + E + L+ ++H N+V +I C + + N KA LV+
Sbjct: 45 KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVF 104
Query: 641 EFMPN---GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
+F + G L N L + + +R +MQ L N L Y+H + I+H D+
Sbjct: 105 DFCEHDLAGLLSNVLVKFTLSEIKR----VMQML------LNGLYYIHRN---KILHRDM 151
Query: 698 KPSNVLLDNEMVAHVGDFGLSRL--LHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
K +NVL+ + V + DFGL+R L NS +RV ++ Y PE LGE +G
Sbjct: 152 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV-VTLWYRPPEL-LLGE-RDYG 208
Query: 756 ---DEYSFGILMLEMFTGKRP--TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALE 810
D + G +M EM+T + P + + L+L + +V +D L E LE
Sbjct: 209 PPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE 267
Query: 811 IQAGIVKELQPNLRA 825
+ G ++++ L+A
Sbjct: 268 LVKGQKRKVKDRLKA 282
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 16/130 (12%)
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+L++W+N++ +++ + L I I +A +E+LH ++H DLKPSN+
Sbjct: 147 NLKDWMNRRCSLEDREHGVCL----HIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTM 199
Query: 707 EMVAHVGDFGLSRLLHDNSPDQT------STSRVKGSIG---YVAPEYGALGEVSTHGDE 757
+ V VGDFGL + + +QT + + G +G Y++PE S D
Sbjct: 200 DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDI 259
Query: 758 YSFGILMLEM 767
+S G+++ E+
Sbjct: 260 FSLGLILFEL 269
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E LR + H N +IT + R + L+ E + G L ++L Q
Sbjct: 54 RRGVSREEIEREVSILRQVLHHN---VITLHDVYENRTD--VVLILELVSGGELFDFLAQ 108
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL--DNEMVAHV 712
KE L+ + S + + + YLH I H DLKP N++L N + H+
Sbjct: 109 KE-------SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 713 G--DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
DFGL+ + D + G+ +VAPE + D +S G++ + +G
Sbjct: 159 KLIDFGLAHEIEDG----VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Query: 771 KRP 773
P
Sbjct: 215 ASP 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 605 AECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPK 664
AE L ++H +V +I + T G + L+ E++ G L Q E E
Sbjct: 70 AERNILEEVKHPFIVDLIYA---FQTGGKLY--LILEYLSGGEL---FMQLERE------ 115
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDN 724
+ + +A + L H I++ DLKP N++L+++ + DFGL + ++
Sbjct: 116 -GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK---ES 171
Query: 725 SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
D T T G+I Y+APE + D +S G LM +M TG P
Sbjct: 172 IHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 605 AECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPK 664
AE L ++H +V +I + T G + L+ E++ G L Q E E
Sbjct: 70 AERNILEEVKHPFIVDLI---YAFQTGGKLY--LILEYLSGGEL---FMQLERE------ 115
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDN 724
+ + +A + L H I++ DLKP N++L+++ + DFGL + ++
Sbjct: 116 -GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK---ES 171
Query: 725 SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
D T T G+I Y+APE + D +S G LM +M TG P
Sbjct: 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 30 TEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH-----RREGNIQYLFL 83
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 84 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 130
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 190 VWSCGIVLTAMLAGELPWD 208
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 32/220 (14%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+A+KVL L++ G E E +RH N++++ TR L+ E+
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-TR----VYLILEYA 94
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPSNV 702
P G++ L + QR + ++AN L Y CH+ ++H D+KP N+
Sbjct: 95 PLGTVYRELQKLSRFDEQRTA-------TYITELANALSY----CHSKRVIHRDIKPENL 143
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DEYS 759
LL + + DFG S +H S + + G++ Y+ PE + E H D +S
Sbjct: 144 LLGSNGELKIADFGWS--VHAPSSRRDTLC---GTLDYLPPE---MIEGRMHDEKVDLWS 195
Query: 760 FGILMLEMFTGKRPTD-DMFEEGLSLHKYAKMGLPDQVAE 798
G+L E G P + ++E + PD V E
Sbjct: 196 LGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTE 235
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 586 NVAVKVLDLQQRGASKS--FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
++ VKVL ++ KS F EC LR H N++ ++ +C S L+ +M
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA---PHPTLITHWM 91
Query: 644 PNGSLENWLNQKED---EQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
P GSL N L++ + +Q+Q K A+D+A + +L H I L
Sbjct: 92 PYGSLYNVLHEGTNFVVDQSQAVKF--------ALDMARGMAFL-HTLEPLIPRHALNSR 142
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH---GDE 757
+V++D +M A + + D S R+ +VAPE T+ D
Sbjct: 143 SVMIDEDMTARIS-------MADVKFSFQSPGRMYAP-AWVAPEALQKKPEDTNRRSADM 194
Query: 758 YSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAI 804
+SF +L+ E+ T + P D+ + + K A GL + I P +
Sbjct: 195 WSFAVLLWELVTREVPFADLSNMEIGM-KVALEGLRPTIPPGISPHV 240
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E LR + H N +IT + R + L+ E + G L ++L Q
Sbjct: 54 RRGVSREEIEREVSILRQVLHHN---VITLHDVYENRTD--VVLILELVSGGELFDFLAQ 108
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL--DNEMVAHV 712
KE L+ + S + + + YLH I H DLKP N++L N + H+
Sbjct: 109 KES-------LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 713 G--DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
DFGL+ + D + G+ +VAPE + D +S G++ + +G
Sbjct: 159 KLIDFGLAHEIEDG----VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Query: 771 KRP 773
P
Sbjct: 215 ASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E LR + H N +IT + R + L+ E + G L ++L Q
Sbjct: 54 RRGVSREEIEREVSILRQVLHHN---VITLHDVYENRTD--VVLILELVSGGELFDFLAQ 108
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL--DNEMVAHV 712
KE L+ + S + + + YLH I H DLKP N++L N + H+
Sbjct: 109 KES-------LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 713 G--DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
DFGL+ + D + G+ +VAPE + D +S G++ + +G
Sbjct: 159 KLIDFGLAHEIEDG----VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Query: 771 KRP 773
P
Sbjct: 215 ASP 217
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 30 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 83
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 84 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 130
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 190 VWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 30 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 83
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 84 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 130
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 190 VWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 30 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 83
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 84 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 130
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 190 VWSCGIVLTAMLAGELPWD 208
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 590 KVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLE 649
++ ++QQ ++F+ E +R + H N++ +I I ++ +M +G L
Sbjct: 59 RITEMQQ---VEAFLREGLLMRGLNHPNVLALI----GIMLPPEGLPHVLLPYMCHGDLL 111
Query: 650 NWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV 709
++ + + P + + +S + VA +EYL VH DL N +LD
Sbjct: 112 QFIRSPQ----RNPTVKDL--ISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFT 162
Query: 710 AHVGDFGLSRLLHDNSPDQTSTSR-VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMF 768
V DFGL+R + D R + + + A E +T D +SFG+L+ E+
Sbjct: 163 VKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
Query: 769 TGKRP 773
T P
Sbjct: 223 TRGAP 227
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E LR + H N +IT + R + L+ E + G L ++L Q
Sbjct: 54 RRGVSREEIEREVSILRQVLHHN---VITLHDVYENRTD--VVLILELVSGGELFDFLAQ 108
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL--DNEMVAHV 712
KE L+ + S + + + YLH I H DLKP N++L N + H+
Sbjct: 109 KES-------LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 713 G--DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
DFGL+ + D + G+ +VAPE + D +S G++ + +G
Sbjct: 159 KLIDFGLAHEIEDG----VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Query: 771 KRP 773
P
Sbjct: 215 ASP 217
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 659 QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS 718
Q QR KL + +++ L YLH I++ DLK NVLLD+E + D+G+
Sbjct: 113 QRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMC 168
Query: 719 RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTD 775
+ P T TS G+ Y+APE + D ++ G+LM EM G+ P D
Sbjct: 169 K--EGLRPGDT-TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E LR + H N +IT + R + L+ E + G L ++L Q
Sbjct: 54 RRGVSREEIEREVSILRQVLHHN---VITLHDVYENRTD--VVLILELVSGGELFDFLAQ 108
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL--DNEMVAHV 712
KE L+ + S + + + YLH I H DLKP N++L N + H+
Sbjct: 109 KES-------LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 713 G--DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
DFGL+ + D + G+ +VAPE + D +S G++ + +G
Sbjct: 159 KLIDFGLAHEIEDG----VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Query: 771 KRP 773
P
Sbjct: 215 ASP 217
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 41 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 94
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 95 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 145
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 203
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 204 SYGVTVWELMTFGSKPYD 221
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 33/200 (16%)
Query: 586 NVAVKVL-DLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
+ A+K + + + + F E E L + H N++ ++ +C + RG + A+ E+
Sbjct: 51 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC---EHRGYLYLAI--EYA 105
Query: 644 PNGSLENWLNQKED---------EQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVH 694
P+G+L ++L + + L+ Q L A DVA ++YL +H
Sbjct: 106 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIH 162
Query: 695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV--- 751
+L N+L+ VA + DFGLSR VK ++G + + A+ +
Sbjct: 163 RNLAARNILVGENYVAKIADFGLSR---------GQEVYVKKTMGRLPVRWMAIESLNYS 213
Query: 752 --STHGDEYSFGILMLEMFT 769
+T+ D +S+G+L+ E+ +
Sbjct: 214 VYTTNSDVWSYGVLLWEIVS 233
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 659 QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS 718
Q QR KL + +++ L YLH I++ DLK NVLLD+E + D+G+
Sbjct: 145 QRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMC 200
Query: 719 RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTD 775
+ P T TS G+ Y+APE + D ++ G+LM EM G+ P D
Sbjct: 201 K--EGLRPGDT-TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 659 QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS 718
Q QR KL + +++ L YLH I++ DLK NVLLD+E + D+G+
Sbjct: 98 QRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMC 153
Query: 719 RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTD 775
+ P T TS G+ Y+APE + D ++ G+LM EM G+ P D
Sbjct: 154 K--EGLRPGDT-TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 44 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 97
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 98 MQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 148
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 206
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 207 SYGVTVWELMTFGSKPYD 224
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 48 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 101
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 102 MQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 152
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 210
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 211 SYGVTVWELMTFGSKPYD 228
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 42 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 95
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 96 MQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 146
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 147 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 204
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 205 SYGVTVWELMTFGSKPYD 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 43 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 96
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 97 MQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 147
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 148 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 205
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 206 SYGVTVWELMTFGSKPYD 223
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 42 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 95
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 96 MQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 146
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 147 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 204
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 205 SYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 41 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 94
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 95 MQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 145
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 203
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 204 SYGVTVWELMTFGSKPYD 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 27/215 (12%)
Query: 583 EETNVAVKVLDLQQRGAS-KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ VA+K ++L++ S + E +A+ H N+V TS D LV +
Sbjct: 34 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW-----LVMK 88
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
+ GS+ + + K K ++ +IA + VLE L + +H D+K N
Sbjct: 89 LLSGGSVLDII--KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 146
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPEYGALGEVSTH---G 755
+LL + + DFG+S L D T K +G ++APE + +V +
Sbjct: 147 ILLGEDGSVQIADFGVSAFLATGG-DITRNKVRKTFVGTPCWMAPE--VMEQVRGYDFKA 203
Query: 756 DEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790
D +SFGI +E+ TG P HKY M
Sbjct: 204 DIWSFGITAIELATGAAP----------YHKYPPM 228
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 45 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 98
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 99 MQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 149
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 150 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 207
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 208 SYGVTVWELMTFGSKPYD 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 52/278 (18%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E E L+ + H ++KI + D +V E M G L + + + + KL
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGDFGLSRLLH 722
Q L ++YLH + I+H DLKP NVLL + + + + DFG S++L
Sbjct: 119 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-----DEYSFGILMLEMFTGKRPTDDM 777
+ S +T + G+ Y+APE L V T G D +S G+++ +G P
Sbjct: 169 ETSLMRT----LCGTPTYLAPE--VLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---- 218
Query: 778 FEEGLSLHKYAKMGLPDQVAE---IIDPAILEEALEIQAGIVKEL---QPNLRAKFHEIQ 831
S H+ ++ L DQ+ P + E E +VK+L P R E
Sbjct: 219 ----FSEHR-TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE-- 271
Query: 832 VSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQAI 869
LR L E++ R K QD + E E+ + Q +
Sbjct: 272 --ALRHPWLQDEDMKR---KFQDLLSEENESTALPQVL 304
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 659 QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS 718
Q QR KL + +++ L YLH I++ DLK NVLLD+E + D+G+
Sbjct: 102 QRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMC 157
Query: 719 RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTD 775
+ P T TS G+ Y+APE + D ++ G+LM EM G+ P D
Sbjct: 158 K--EGLRPGDT-TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 48 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 101
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 102 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 152
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 210
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 211 SYGVTVWELMTFGSKPYD 228
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 52/278 (18%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E E L+ + H ++KI + D +V E M G L + + + + KL
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKL 124
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGDFGLSRLLH 722
Q L ++YLH + I+H DLKP NVLL + + + + DFG S++L
Sbjct: 125 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 174
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-----DEYSFGILMLEMFTGKRPTDDM 777
+ S +T + G+ Y+APE L V T G D +S G+++ +G P
Sbjct: 175 ETSLMRT----LCGTPTYLAPE--VLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---- 224
Query: 778 FEEGLSLHKYAKMGLPDQVAE---IIDPAILEEALEIQAGIVKEL---QPNLRAKFHEIQ 831
S H+ ++ L DQ+ P + E E +VK+L P R E
Sbjct: 225 ----FSEHR-TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE-- 277
Query: 832 VSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQAI 869
LR L E++ R K QD + E E+ + Q +
Sbjct: 278 --ALRHPWLQDEDMKR---KFQDLLSEENESTALPQVL 310
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 597 RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKE 656
+G S E LR I+H N+V + I N LV + + G L + + +K
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVAL----EDIYESPNHL-YLVMQLVSGGELFDRIVEKG 115
Query: 657 DEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVG 713
+ + Q V + + YLH IVH DLKP N+L D E +
Sbjct: 116 FYTEKDASTLIRQ-------VLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMIS 165
Query: 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
DFGLS++ + D ST+ G+ GYVAPE A S D +S G++ + G P
Sbjct: 166 DFGLSKM--EGKGDVMSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
Query: 774 TDD 776
D
Sbjct: 222 FYD 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 41 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 94
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 95 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 145
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 203
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 204 SYGVTVWELMTFGSKPYD 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 52/278 (18%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E E L+ + H ++KI + D +V E M G L + + + + KL
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKL 117
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGDFGLSRLLH 722
Q L ++YLH + I+H DLKP NVLL + + + + DFG S++L
Sbjct: 118 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 167
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-----DEYSFGILMLEMFTGKRPTDDM 777
+ S +T + G+ Y+APE L V T G D +S G+++ +G P
Sbjct: 168 ETSLMRT----LCGTPTYLAPE--VLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---- 217
Query: 778 FEEGLSLHKYAKMGLPDQVAE---IIDPAILEEALEIQAGIVKEL---QPNLRAKFHEIQ 831
S H+ ++ L DQ+ P + E E +VK+L P R E
Sbjct: 218 ----FSEHR-TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE-- 270
Query: 832 VSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQAI 869
LR L E++ R K QD + E E+ + Q +
Sbjct: 271 --ALRHPWLQDEDMKR---KFQDLLSEENESTALPQVL 303
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 48 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 101
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 102 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 152
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 210
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 211 SYGVTVWELMTFGSKPYD 228
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 38 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 91
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 92 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYLEDR---RLVHRDLAA 142
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 143 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 200
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 201 SYGVTVWELMTFGSKPYD 218
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 41 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 94
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 95 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 145
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 203
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 204 SYGVTVWELMTFGSKPYD 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 41 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 94
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 95 TQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 145
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 203
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 204 SYGVTVWELMTFGSKPYD 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 52/278 (18%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E E L+ + H ++KI + D +V E M G L + + + + KL
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGDFGLSRLLH 722
Q L ++YLH + I+H DLKP NVLL + + + + DFG S++L
Sbjct: 119 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-----DEYSFGILMLEMFTGKRPTDDM 777
+ S +T + G+ Y+APE L V T G D +S G+++ +G P
Sbjct: 169 ETSLMRT----LCGTPTYLAPE--VLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---- 218
Query: 778 FEEGLSLHKYAKMGLPDQVAE---IIDPAILEEALEIQAGIVKEL---QPNLRAKFHEIQ 831
S H+ ++ L DQ+ P + E E +VK+L P R E
Sbjct: 219 ----FSEHR-TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE-- 271
Query: 832 VSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQAI 869
LR L E++ R K QD + E E+ + Q +
Sbjct: 272 --ALRHPWLQDEDMKR---KFQDLLSEENESTALPQVL 304
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 44 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 97
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 98 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 148
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 206
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 207 SYGVTVWELMTFGSKPYD 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 43 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 96
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 97 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 147
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 148 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 205
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 206 SYGVTVWELMTFGSKPYD 223
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 44 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 97
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 98 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 148
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 206
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 207 SYGVTVWELMTFGSKPYD 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 44 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 97
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 98 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 148
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 206
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 207 SYGVTVWELMTFGSKPYD 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 35 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 88
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 89 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 139
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 140 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 197
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 198 SYGVTVWELMTFGSKPYD 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 51 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 104
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 105 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 155
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 156 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 213
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 214 SYGVTVWELMTFGSKPYD 231
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 27/215 (12%)
Query: 583 EETNVAVKVLDLQQRGAS-KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
++ VA+K ++L++ S + E +A+ H N+V TS D LV +
Sbjct: 39 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW-----LVMK 93
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
+ GS+ + + K K ++ +IA + VLE L + +H D+K N
Sbjct: 94 LLSGGSVLDII--KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 151
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPEYGALGEVSTH---G 755
+LL + + DFG+S L D T K +G ++APE + +V +
Sbjct: 152 ILLGEDGSVQIADFGVSAFLATGG-DITRNKVRKTFVGTPCWMAPE--VMEQVRGYDFKA 208
Query: 756 DEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790
D +SFGI +E+ TG P HKY M
Sbjct: 209 DIWSFGITAIELATGAAP----------YHKYPPM 233
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 47 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 100
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 101 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 151
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 152 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 209
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 210 SYGVTVWELMTFGSKPYD 227
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 66 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 119
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 120 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 170
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFGL++LL + + K I ++A E L + TH D +
Sbjct: 171 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 228
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 229 SYGVTVWELMTFGSKPYD 246
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
Query: 587 VAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK++D Q +S + E + + H N+VK+ I+T + LV E+
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF---EVIETEKTLY--LVXEYAS 96
Query: 645 NGSLENWL--NQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
G + ++L + + E+ R K + + ++Y H IVH DLK N+
Sbjct: 97 GGEVFDYLVAHGRXKEKEARAKFR---------QIVSAVQYCHQKF---IVHRDLKAENL 144
Query: 703 LLDNEMVAHVGDFGLS-RLLHDNSPDQTSTSRVKGSIGYVAPE-YGALGEVSTHGDEYSF 760
LLD + + DFG S N D G+ Y APE + D +S
Sbjct: 145 LLDADXNIKIADFGFSNEFTFGNKLDAFC-----GAPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 761 GILMLEMFTGKRPTD 775
G+++ + +G P D
Sbjct: 200 GVILYTLVSGSLPFD 214
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 30 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 83
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 84 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 130
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 190 VWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 29 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 82
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 83 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 129
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 130 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVD 188
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 189 VWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 30 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 83
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 84 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 130
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 190 VWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 30 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 83
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 84 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 130
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 190 VWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 31 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 84
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 131
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 191 VWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 30 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 83
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 84 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 130
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 190 VWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 30 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 83
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 84 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 130
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 190 VWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 30 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 83
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 84 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 130
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 190 VWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 582 TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
TEE VAVK++D+++ ++ E + + H N+VK R + L
Sbjct: 31 TEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH-----RREGNIQYLFL 84
Query: 641 EFMPNGSLENWLNQK---EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
E+ G L + + + QR LM A V+ YLH I H D+
Sbjct: 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLM---------AGVV-YLHG---IGITHRDI 131
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-D 756
KP N+LLD + DFGL+ + N+ ++ +++ G++ YVAPE E D
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 757 EYSFGILMLEMFTGKRPTD 775
+S GI++ M G+ P D
Sbjct: 191 VWSCGIVLTAMLAGELPWD 209
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
ET V +KVLD R S+SF + + H++LV C G+E LV EF+
Sbjct: 40 ETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC----GDE-NILVQEFV 94
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
GSL+ +L + ++ +N++ +L +A +A + +L + +++H ++ N+L
Sbjct: 95 KFGSLDTYLKKNKN------CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNIL 145
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPE-YGALGEVSTHGDEY 758
L E G+ +L + P + T K I +V PE ++ D++
Sbjct: 146 LIREEDRKTGNPPFIKL---SDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKW 202
Query: 759 SFGILMLEMFTG 770
SFG + E+ +G
Sbjct: 203 SFGTTLWEICSG 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 32/255 (12%)
Query: 586 NVAVK--VLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA---LVY 640
VA+K +++ ++ G + + E + L+ ++H N+V +I C + + N K LV+
Sbjct: 45 KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVF 104
Query: 641 EFMPN---GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
+F + G L N L + + +R +MQ L N L Y+H + I+H D+
Sbjct: 105 DFCEHDLAGLLSNVLVKFTLSEIKR----VMQML------LNGLYYIHRN---KILHRDM 151
Query: 698 KPSNVLLDNEMVAHVGDFGLSRL--LHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
K +NVL+ + V + DFGL+R L NS +RV ++ Y PE LGE +G
Sbjct: 152 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV-VTLWYRPPEL-LLGE-RDYG 208
Query: 756 ---DEYSFGILMLEMFTGKRP--TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALE 810
D + G +M EM+T + P + + L+L + +V +D L E LE
Sbjct: 209 PPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE 267
Query: 811 IQAGIVKELQPNLRA 825
+ G ++++ L+A
Sbjct: 268 LVKGQKRKVKDRLKA 282
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA---LVYEFM 643
VAVK+ +Q + + ++ E +L ++H N+++ I + + RG L+ F
Sbjct: 50 VAVKIFPIQDKQSWQNEY-EVYSLPGMKHENILQFIGA----EKRGTSVDVDLWLITAFH 104
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-------HTSIVHCD 696
GSL ++L N+ IA +A L YLH +I H D
Sbjct: 105 EKGSLSDFLKANVVSWNEL--------CHIAETMARGLAYLHEDIPGLKDGHKPAISHRD 156
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY--GALG---EV 751
+K NVLL N + A + DFGL+ L + T G+ Y+APE GA+ +
Sbjct: 157 IKSKNVLLKNNLTACIADFGLA-LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDA 215
Query: 752 STHGDEYSFGILMLEMFT----GKRPTDDM---FEEGLSLH 785
D Y+ G+++ E+ + P D+ FEE + H
Sbjct: 216 FLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 34/187 (18%)
Query: 639 VYEFMPNGSLE--NWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
+Y M G+++ +WL +K+ ++ +R S ++ + +H H IVH D
Sbjct: 84 IYMVMECGNIDLNSWLKKKKS-------IDPWERKSYWKNMLEAVHTIHQH---GIVHSD 133
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST--- 753
LKP+N L+ + M+ + DFG++ + ++ S+V G++ Y+ PE A+ ++S+
Sbjct: 134 LKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV-GTVNYMPPE--AIKDMSSSRE 189
Query: 754 ----------HGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPA 803
D +S G ++ M GK P + + LH + D EI P
Sbjct: 190 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH-----AIIDPNHEIEFPD 244
Query: 804 ILEEALE 810
I E+ L+
Sbjct: 245 IPEKDLQ 251
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 37/197 (18%)
Query: 588 AVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEFKALVYEF 642
AVKV++ + + + + E E L+ + H N++K I+ SS +V E
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF--------YIVGEL 102
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
G L DE +R + + I V + + Y+H H +IVH DLKP N+
Sbjct: 103 YTGGELF-------DEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENI 152
Query: 703 LLDN---EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPEYGALGEVSTHGD 756
LL++ + + DFGLS N +++K IG Y+APE G D
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQN-------TKMKDRIGTAYYIAPEV-LRGTYDEKCD 204
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+++ + +G P
Sbjct: 205 VWSAGVILYILLSGTPP 221
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 34/187 (18%)
Query: 639 VYEFMPNGSLE--NWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
+Y M G+++ +WL +K+ ++ +R S ++ + +H H IVH D
Sbjct: 87 IYMVMECGNIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSD 136
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST--- 753
LKP+N L+ + M+ + DFG++ + ++ S+V G++ Y+ PE A+ ++S+
Sbjct: 137 LKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV-GTVNYMPPE--AIKDMSSSRE 192
Query: 754 ----------HGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPA 803
D +S G ++ M GK P + + LH + D EI P
Sbjct: 193 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH-----AIIDPNHEIEFPD 247
Query: 804 ILEEALE 810
I E+ L+
Sbjct: 248 IPEKDLQ 254
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 34/187 (18%)
Query: 639 VYEFMPNGSLE--NWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
+Y M G+++ +WL +K+ ++ +R S ++ + +H H IVH D
Sbjct: 83 IYMVMECGNIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSD 132
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST--- 753
LKP+N L+ + M+ + DFG++ + ++ S+V G++ Y+ PE A+ ++S+
Sbjct: 133 LKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV-GTVNYMPPE--AIKDMSSSRE 188
Query: 754 ----------HGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPA 803
D +S G ++ M GK P + + LH + D EI P
Sbjct: 189 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH-----AIIDPNHEIEFPD 243
Query: 804 ILEEALE 810
I E+ L+
Sbjct: 244 IPEKDLQ 250
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 37/178 (20%)
Query: 616 RNLVKIIT--------SCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDE------QNQ 661
+N ++IIT +C I T +E ++YE+M N S+ K DE +N
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEV-YIIYEYMENDSI-----LKFDEYFFVLDKNY 144
Query: 662 RPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLL 721
+ + I V N Y+H+ +I H D+KPSN+L+D + DFG S +
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
Query: 722 HDNSPDQTSTSRVKGSIG---YVAPEYGALGEVSTHG---DEYSFGILMLEMFTGKRP 773
D ++KGS G ++ PE+ + E S +G D +S GI + MF P
Sbjct: 203 VD--------KKIKGSRGTYEFMPPEFFS-NESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 22/192 (11%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
ET V +KVLD R S+SF + + H++LV C D LV EF+
Sbjct: 40 ETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDE-----NILVQEFV 94
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
GSL+ +L + ++ +N++ +L +A +A + +L + +++H ++ N+L
Sbjct: 95 KFGSLDTYLKKNKN------CINILWKLEVAKQLAWAMHFLEEN---TLIHGNVCAKNIL 145
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKG----SIGYVAPE-YGALGEVSTHGDEY 758
L E G+ +L + P + T K I +V PE ++ D++
Sbjct: 146 LIREEDRKTGNPPFIKL---SDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKW 202
Query: 759 SFGILMLEMFTG 770
SFG + E+ +G
Sbjct: 203 SFGTTLWEICSG 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 32/197 (16%)
Query: 587 VAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VA+K++D Q + + E ++ + H N+VK+ I+T + L+ E+
Sbjct: 43 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF---EVIETEKTLY--LIMEYAS 97
Query: 645 NGSLENWL--NQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV 702
G + ++L + + E+ R K + + ++Y H IVH DLK N+
Sbjct: 98 GGEVFDYLVAHGRMKEKEARSKFR---------QIVSAVQYCHQ---KRIVHRDLKAENL 145
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPE-YGALGEVSTHGDEY 758
LLD +M + DFG S + T ++ G Y APE + D +
Sbjct: 146 LLDADMNIKIADFGFSN-------EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVW 198
Query: 759 SFGILMLEMFTGKRPTD 775
S G+++ + +G P D
Sbjct: 199 SLGVILYTLVSGSLPFD 215
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 37/201 (18%)
Query: 584 ETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEFKAL 638
+ AVKV++ + + + + E E L+ + H N++K I+ SS +
Sbjct: 47 QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF--------YI 98
Query: 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698
V E G L DE +R + + I V + + Y+H H +IVH DLK
Sbjct: 99 VGELYTGGELF-------DEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLK 148
Query: 699 PSNVLLDN---EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPEYGALGEVS 752
P N+LL++ + + DFGLS N +++K IG Y+APE G
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQN-------TKMKDRIGTAYYIAPEV-LRGTYD 200
Query: 753 THGDEYSFGILMLEMFTGKRP 773
D +S G+++ + +G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 37/201 (18%)
Query: 584 ETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVK---IITSCSSIDTRGNEFKAL 638
+ AVKV++ + + + + E E L+ + H N++K I+ SS +
Sbjct: 47 QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF--------YI 98
Query: 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698
V E G L DE +R + + I V + + Y+H H +IVH DLK
Sbjct: 99 VGELYTGGELF-------DEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLK 148
Query: 699 PSNVLLDN---EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPEYGALGEVS 752
P N+LL++ + + DFGLS N +++K IG Y+APE G
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQN-------TKMKDRIGTAYYIAPEV-LRGTYD 200
Query: 753 THGDEYSFGILMLEMFTGKRP 773
D +S G+++ + +G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 32/255 (12%)
Query: 586 NVAVK--VLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA---LVY 640
VA+K +++ ++ G + + E + L+ ++H N+V +I C + + N K LV+
Sbjct: 45 KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVF 104
Query: 641 EFMPN---GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
+F + G L N L + + +R +MQ L N L Y+H + I+H D+
Sbjct: 105 DFCEHDLAGLLSNVLVKFTLSEIKR----VMQML------LNGLYYIHRN---KILHRDM 151
Query: 698 KPSNVLLDNEMVAHVGDFGLSRL--LHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
K +NVL+ + V + DFGL+R L NS +RV ++ Y PE LGE +G
Sbjct: 152 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV-VTLWYRPPEL-LLGE-RDYG 208
Query: 756 ---DEYSFGILMLEMFTGKRP--TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALE 810
D + G +M EM+T + P + + L+L + +V +D L E LE
Sbjct: 209 PPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE 267
Query: 811 IQAGIVKELQPNLRA 825
+ G ++++ L+A
Sbjct: 268 LVKGQKRKVKDRLKA 282
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
MP G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 MPGGDMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLLIDQQGYIKVADFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 124/258 (48%), Gaps = 38/258 (14%)
Query: 586 NVAVK--VLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA---LVY 640
VA+K +++ ++ G + + E + L+ ++H N+V +I C + + N K LV+
Sbjct: 44 KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVF 103
Query: 641 EFMPN---GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
+F + G L N L + + +R +MQ L N L Y+H + I+H D+
Sbjct: 104 DFCEHDLAGLLSNVLVKFTLSEIKR----VMQML------LNGLYYIHRN---KILHRDM 150
Query: 698 KPSNVLLDNEMVAHVGDFGLSRL--LHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
K +NVL+ + V + DFGL+R L NS +RV ++ Y PE LGE +G
Sbjct: 151 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV-VTLWYRPPEL-LLGE-RDYG 207
Query: 756 ---DEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM-----GLPDQVAEIIDPAILEE 807
D + G +M EM+T + P + + H+ A + + +V +D L E
Sbjct: 208 PPIDLWGAGCIMAEMWT-RSP---IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE 263
Query: 808 ALEIQAGIVKELQPNLRA 825
LE+ G ++++ L+A
Sbjct: 264 KLELVKGQKRKVKDRLKA 281
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
MP G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 MPGGDMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLLIDQQGYIKVADFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 677 VANVLEYLHHHCHTSIVHCDLKPSNVL---LDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
V + ++YLH IVH DLKP N+L LD + + DFGLS++ S T+
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC-- 179
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDD 776
G+ GYVAPE A S D +S G++ + G P D
Sbjct: 180 --GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
N L +WL +K+ ++ +R S ++ + +H H IVH DLKP+N L+
Sbjct: 111 NIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLI 160
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST----------- 753
+ M+ + DFG++ + ++ S+V G++ Y+ PE A+ ++S+
Sbjct: 161 VDGMLKLI-DFGIANQMQPDTTSVVKDSQV-GTVNYMPPE--AIKDMSSSRENGKSKSKI 216
Query: 754 --HGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALE 810
D +S G ++ M GK P + + LH + D EI P I E+ L+
Sbjct: 217 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH-----AIIDPNHEIEFPDIPEKDLQ 270
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.3 bits (116), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 683 YLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVA 742
YLH I H D+KP N+LLD + DFGL+ + N+ ++ +++ G++ YVA
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVA 175
Query: 743 PEYGALGEVSTHG-DEYSFGILMLEMFTGKRPTD 775
PE E D +S GI++ M G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 52/278 (18%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E E L+ + H ++KI + D +V E M G L + + + + KL
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGDFGLSRLLH 722
Q L ++YLH + I+H DLKP NVLL + + + + DFG S++L
Sbjct: 119 YFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 723 DNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-----DEYSFGILMLEMFTGKRPTDDM 777
+ S +T + G+ Y+APE L V T G D +S G+++ +G P
Sbjct: 169 ETSLMRT----LCGTPTYLAPE--VLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---- 218
Query: 778 FEEGLSLHKYAKMGLPDQVAE---IIDPAILEEALEIQAGIVKEL---QPNLRAKFHEIQ 831
S H+ ++ L DQ+ P + E E +VK+L P R E
Sbjct: 219 ----FSEHR-TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE-- 271
Query: 832 VSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQAI 869
LR L E++ R K QD + E E+ Q +
Sbjct: 272 --ALRHPWLQDEDMKR---KFQDLLSEENESTAKPQVL 304
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 683 YLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVA 742
YLH I H D+KP N+LLD + DFGL+ + N+ ++ +++ G++ YVA
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVA 175
Query: 743 PEYGALGEVSTHG-DEYSFGILMLEMFTGKRPTD 775
PE E D +S GI++ M G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 683 YLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVA 742
YLH I H D+KP N+LLD + DFGL+ + N+ ++ +++ G++ YVA
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVA 175
Query: 743 PEYGALGEVSTHG-DEYSFGILMLEMFTGKRPTD 775
PE E D +S GI++ M G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 683 YLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVA 742
YLH I H D+KP N+LLD + DFGL+ + N+ ++ +++ G++ YVA
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVA 175
Query: 743 PEYGALGEVSTHG-DEYSFGILMLEMFTGKRPTD 775
PE E D +S GI++ M G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 38/209 (18%)
Query: 589 VKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSL 648
++ +D+Q R E E L+ + H+N+VK+ TR K L+ EF P GSL
Sbjct: 48 LRPVDVQMR--------EFEVLKKLNHKNIVKLFAIEEETTTR---HKVLIMEFCPCGSL 96
Query: 649 ENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---- 704
L + + + I + +V+ ++H IVH ++KP N++
Sbjct: 97 YTVLEEPSNAYG-------LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
D + V + DFG +R L D D+ S Y EY H D Y +L
Sbjct: 150 DGQSVYKLTDFGAARELED---DEQFVSL------YGTEEY-------LHPDMYERAVLR 193
Query: 765 LEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793
+ T D++ G++ + A LP
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A ++ + L +LH I++ DLK NVLLD+E + DFG+ + + + +T+
Sbjct: 130 AAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTAT 183
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP-----TDDMFE 779
G+ Y+APE D ++ G+L+ EM G P DD+FE
Sbjct: 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE 234
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 677 VANVLEYLHHHCHTSIVHCDLKPSNVL---LDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
V + ++YLH IVH DLKP N+L LD + + DFGLS++ S T+
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC-- 179
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDD 776
G+ GYVAPE A S D +S G++ + G P D
Sbjct: 180 --GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 113/268 (42%), Gaps = 52/268 (19%)
Query: 605 AECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPK 664
E E L+ + H ++KI + D +V E M G L + + + + K
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCK 242
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGDFGLSRLL 721
L Q L ++YLH + I+H DLKP NVLL + + + + DFG S++L
Sbjct: 243 LYFYQMLL-------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292
Query: 722 HDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG-----DEYSFGILMLEMFTGKRPTDD 776
+ S +T + G+ Y+APE L V T G D +S G+++ +G P
Sbjct: 293 GETSLMRT----LCGTPTYLAPE--VLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--- 343
Query: 777 MFEEGLSLHKYAKMGLPDQVAE---IIDPAILEEALEIQAGIVKEL---QPNLRAKFHEI 830
S H+ ++ L DQ+ P + E E +VK+L P R E
Sbjct: 344 -----FSEHR-TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE- 396
Query: 831 QVSILRVGILCSEELPRDRMKIQDAIME 858
LR L E++ R K QD + E
Sbjct: 397 ---ALRHPWLQDEDMKR---KFQDLLSE 418
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+YLH +H D+K +NVLL + + DFG++ L D Q + G+ +
Sbjct: 133 LDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDT---QIKRNTFVGTPFW 186
Query: 741 VAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM 777
+APE + D +S GI +E+ G+ P DM
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 673 IAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTS 732
IA+ + LE+LH S++H D+KPSNVL++ + DFG+S L D+ + +
Sbjct: 158 IAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS----VAKT 211
Query: 733 RVKGSIGYVAPEY--GALGE--VSTHGDEYSFGILMLEMFTGKRPTD 775
G Y+APE L + S D +S GI M+E+ + P D
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
+ SL+ + Q D+ P+ L + IA+ + LE+LH S++H D+KPSNVL+
Sbjct: 89 DTSLDKFYKQVIDKGQTIPEDILGK---IAVSIVKALEHLHSKL--SVIHRDVKPSNVLI 143
Query: 705 DNEMVAHVGDFGLS-RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
+ + DFG+S L+ D + D + + + + PE G S D +S GI
Sbjct: 144 NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGIT 202
Query: 764 MLEMFTGKRPTD 775
M+E+ + P D
Sbjct: 203 MIELAILRFPYD 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 677 VANVLEYLHHHCHTSIVHCDLKPSNVL---LDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
V + ++YLH IVH DLKP N+L LD + + DFGLS++ S T+
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC-- 179
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDD 776
G+ GYVAPE A S D +S G++ + G P D
Sbjct: 180 --GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 675 IDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRV 734
I +A V H + I+H D+KPSN+LLD + DFG+S L D+ + +R
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS----IAKTRD 185
Query: 735 KGSIGYVAPEY----GALGEVSTHGDEYSFGILMLEMFTGKRP 773
G Y+APE + D +S GI + E+ TG+ P
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 677 VANVLEYLHHHCHTSIVHCDLKPSNVL---LDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
V + ++YLH IVH DLKP N+L LD + + DFGLS++ S T+
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC-- 179
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDD 776
G+ GYVAPE A S D +S G++ + G P D
Sbjct: 180 --GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 613 IRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLS 672
+ RN VK +T+ T + E+ N +L + ++ + Q + L ++
Sbjct: 72 LERRNFVKPMTAVKKKSTL-----FIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQ-- 124
Query: 673 IAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLH--------DN 724
+ L Y+H I+H DLKP N+ +D +GDFGL++ +H D+
Sbjct: 125 ----ILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 725 SPDQTSTSRVKGSIG---YVAPEY-GALGEVSTHGDEYSFGILMLEM 767
S+ + +IG YVA E G + D YS GI+ EM
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 34/187 (18%)
Query: 639 VYEFMPNGSLE--NWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
+Y M G+++ +WL +K+ ++ +R S ++ + +H H IVH D
Sbjct: 131 IYMVMECGNIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSD 180
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST--- 753
LKP+N L+ + M+ + DFG++ + ++ S+V G++ Y+ PE A+ ++S+
Sbjct: 181 LKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV-GTVNYMPPE--AIKDMSSSRE 236
Query: 754 ----------HGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPA 803
D +S G ++ M GK P + + LH + D EI P
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH-----AIIDPNHEIEFPD 291
Query: 804 ILEEALE 810
I E+ L+
Sbjct: 292 IPEKDLQ 298
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 683 YLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVA 742
YLH I H D+KP N+LLD + DFGL+ + N+ ++ +++ G++ YVA
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVA 175
Query: 743 PEYGALGEVSTHG-DEYSFGILMLEMFTGKRPTD 775
PE E D +S GI++ M G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M GSL+ L + R ++ ++SIA V L YL I+H D
Sbjct: 83 SICMEHMDGGSLDQVLKKA-----GRIPEQILGKVSIA--VIKGLTYLREK--HKIMHRD 133
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+KPSN+L+++ + DFG+S L D ++ +R Y++PE S D
Sbjct: 134 VKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTR-----SYMSPERLQGTHYSVQSD 188
Query: 757 EYSFGILMLEMFTGKRPTDDM 777
+S G+ ++EM G+ P M
Sbjct: 189 IWSMGLSLVEMAVGRYPRPPM 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 683 YLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVA 742
YLH I H D+KP N+LLD + DFGL+ + N+ ++ +++ G++ YVA
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVA 174
Query: 743 PEYGALGEVSTHG-DEYSFGILMLEMFTGKRPTD 775
PE E D +S GI++ M G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 38/209 (18%)
Query: 589 VKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSL 648
++ +D+Q R E E L+ + H+N+VK+ TR K L+ EF P GSL
Sbjct: 48 LRPVDVQMR--------EFEVLKKLNHKNIVKLFAIEEETTTR---HKVLIMEFCPCGSL 96
Query: 649 ENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---- 704
L + + + I + +V+ ++H IVH ++KP N++
Sbjct: 97 YTVLEEPSNAYG-------LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
D + V + DFG +R L D+ YG E H D Y +L
Sbjct: 150 DGQSVYKLTDFGAARELEDDEQ--------------FVXLYGT--EEYLHPDMYERAVLR 193
Query: 765 LEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793
+ T D++ G++ + A LP
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 34/187 (18%)
Query: 639 VYEFMPNGSLE--NWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
+Y M G+++ +WL +K+ ++ +R S ++ + +H H IVH D
Sbjct: 131 IYMVMECGNIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSD 180
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST--- 753
LKP+N L+ + M+ + DFG++ + ++ S+V G++ Y+ PE A+ ++S+
Sbjct: 181 LKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV-GAVNYMPPE--AIKDMSSSRE 236
Query: 754 ----------HGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPA 803
D +S G ++ M GK P + + LH + D EI P
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH-----AIIDPNHEIEFPD 291
Query: 804 ILEEALE 810
I E+ L+
Sbjct: 292 IPEKDLQ 298
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 34/187 (18%)
Query: 639 VYEFMPNGSLE--NWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
+Y M G+++ +WL +K+ ++ +R S ++ + +H H IVH D
Sbjct: 131 IYMVMECGNIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSD 180
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST--- 753
LKP+N L+ + M+ + DFG++ + ++ S+V G++ Y+ PE A+ ++S+
Sbjct: 181 LKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV-GTVNYMPPE--AIKDMSSSRE 236
Query: 754 ----------HGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPA 803
D +S G ++ M GK P + + LH + D EI P
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH-----AIIDPNHEIEFPD 291
Query: 804 ILEEALE 810
I E+ L+
Sbjct: 292 IPEKDLQ 298
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M GSL+ L ++ R ++ ++SIA V L YL I+H D
Sbjct: 99 SICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIA--VIKGLTYLREK--HKIMHRD 149
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+KPSN+L+++ + DFG+S L D+ + +R Y++PE S D
Sbjct: 150 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSPERLQGTHYSVQSD 204
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+ ++EM G+ P
Sbjct: 205 IWSMGLSLVEMAVGRYP 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 45 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 98
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 99 MQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 149
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFG ++LL + + K I ++A E L + TH D +
Sbjct: 150 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 207
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 208 SYGVTVWELMTFGSKPYD 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 43 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 96
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 97 MQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 147
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFG ++LL + + K I ++A E L + TH D +
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 205
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 206 SYGVTVWELMTFGSKPYD 223
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
N A K + ++ E + + +RH LV + + NE ++YEFM
Sbjct: 184 NFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED----DNEM-VMIYEFMSG 238
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L + DE N K++ + + V L ++H + + VH DLKP N++
Sbjct: 239 GEL---FEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFT 289
Query: 706 NEMVAHVG--DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
+ + DFGL+ L P Q S G+ + APE V + D +S G+L
Sbjct: 290 TKRSNELKLIDFGLTAHL---DPKQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
Query: 764 MLEMFTGKRP 773
+ +G P
Sbjct: 346 SYILLSGLSP 355
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 43 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 96
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 97 MQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 147
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFG ++LL + + K I ++A E L + TH D +
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 205
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 206 SYGVTVWELMTFGSKPYD 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+ E L++ RH L + + + D V E+ G L L+++ +R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 107
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
+ ++ + LEYLH +V+ D+K N++LD + + DFGL + +
Sbjct: 108 RF-------YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---E 154
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
D + G+ Y+APE + D + G++M EM G+ P
Sbjct: 155 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+ E L++ RH L + + + D V E+ G L L+++ +R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 107
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
+ ++ + LEYLH +V+ D+K N++LD + + DFGL + +
Sbjct: 108 RF-------YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---E 154
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
D + G+ Y+APE + D + G++M EM G+ P
Sbjct: 155 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+ E L++ RH L + + + D V E+ G L L+++ +R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 107
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
+ ++ + LEYLH +V+ D+K N++LD + + DFGL + +
Sbjct: 108 RF-------YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---E 154
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
D + G+ Y+APE + D + G++M EM G+ P
Sbjct: 155 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 48 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 101
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 102 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 152
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFG ++LL + + K I ++A E L + TH D +
Sbjct: 153 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 210
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 211 SYGVTVWELMTFGSKPYD 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 41 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 94
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 95 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 145
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFG ++LL + + K I ++A E L + TH D +
Sbjct: 146 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 203
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 204 SYGVTVWELMTFGSKPYD 221
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 690 TSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTS-TSRVKGSIGYVAPEYGAL 748
++++H DLKPSN+L+++ V DFGL+R++ +++ D + T + G YVA +
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRA 190
Query: 749 GEV-------STHGDEYSFGILMLEMFTGKRP 773
EV S D +S G ++ E+F +RP
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFL-RRP 221
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 32/179 (17%)
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
N L +WL +K+ ++ +R S ++ + +H H IVH DLKP+N L+
Sbjct: 111 NIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLI 160
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST----------- 753
+ M+ + DFG++ + + S+V G++ Y+ PE A+ ++S+
Sbjct: 161 VDGMLKLI-DFGIANQMQPDXXXVVKDSQV-GTVNYMPPE--AIKDMSSSRENGKSKSKI 216
Query: 754 --HGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALE 810
D +S G ++ M GK P + + LH + D EI P I E+ L+
Sbjct: 217 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH-----AIIDPNHEIEFPDIPEKDLQ 270
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+ E L++ RH L + + + D V E+ G L L+++ +R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 107
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
+ ++ + LEYLH +V+ D+K N++LD + + DFGL + +
Sbjct: 108 RF-------YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---E 154
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
D + G+ Y+APE + D + G++M EM G+ P
Sbjct: 155 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M GSL+ L + +R ++ ++SIA V L YL I+H D
Sbjct: 90 SICMEHMDGGSLDQVLKEA-----KRIPEEILGKVSIA--VLRGLAYLREK--HQIMHRD 140
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+KPSN+L+++ + DFG+S L D + + G+ Y+APE S D
Sbjct: 141 VKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMAPERLQGTHYSVQSD 195
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+ ++E+ G+ P
Sbjct: 196 IWSMGLSLVELAVGRYP 212
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 588 AVKVLD----LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
A+KVL +Q+ ++ E + L IR + + +T+ + L+ +++
Sbjct: 86 AMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH----LILDYI 141
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
G L L+Q+E + I V ++ L H I++ D+K N+L
Sbjct: 142 NGGELFTHLSQRER----------FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENIL 191
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTS-RVKGSIGYVAPEYGALGEVSTHG---DEYS 759
LD+ + DFGLS+ + D+T + G+I Y+AP+ G+ S H D +S
Sbjct: 192 LDSNGHVVLTDFGLSK---EFVADETERAYDFCGTIEYMAPDIVRGGD-SGHDKAVDWWS 247
Query: 760 FGILMLEMFTGKRP 773
G+LM E+ TG P
Sbjct: 248 LGVLMYELLTGASP 261
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 29/196 (14%)
Query: 588 AVKVLDLQQRGASKSFIA------ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYE 641
A K + +Q AS+ + E LR + H N IIT + R + L+ E
Sbjct: 41 AAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN---IITLHDVYENRTD--VVLILE 95
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
+ G L ++L QKE L+ + S + + + YLH I H DLKP N
Sbjct: 96 LVSGGELFDFLAQKES-------LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPEN 145
Query: 702 VLL--DNEMVAHVG--DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
++L N + H+ DFGL+ + D + G+ +VAPE + D
Sbjct: 146 IMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKNIFGTPEFVAPEIVNYEPLGLEADM 201
Query: 758 YSFGILMLEMFTGKRP 773
+S G++ + +G P
Sbjct: 202 WSIGVITYILLSGASP 217
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 583 EETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
E+ + V + +L++ A+K + E + S+ + ++ +++ C + + L+
Sbjct: 43 EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LI 96
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
+ MP G L +++ + +D + LN + +A + YL +VH DL
Sbjct: 97 TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAA 147
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEY 758
NVL+ + DFG ++LL + + K I ++A E L + TH D +
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE-SILHRIYTHQSDVW 205
Query: 759 SFGILMLEMFT-GKRPTD 775
S+G+ + E+ T G +P D
Sbjct: 206 SYGVTVWELMTFGSKPYD 223
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+ E L++ RH L + + + D V E+ G L L+++ +R
Sbjct: 56 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 110
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
+ ++ + LEYLH +V+ D+K N++LD + + DFGL + +
Sbjct: 111 RF-------YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---E 157
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
D + G+ Y+APE + D + G++M EM G+ P
Sbjct: 158 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+ E L++ RH L + + + D V E+ G L L+++ +R
Sbjct: 58 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 112
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
+ ++ + LEYLH +V+ D+K N++LD + + DFGL + +
Sbjct: 113 RF-------YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---E 159
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
D + G+ Y+APE + D + G++M EM G+ P
Sbjct: 160 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 604 IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP 663
+ E L++ RH L + + + D V E+ G L L+++ +R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 107
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
+ ++ + LEYLH +V+ D+K N++LD + + DFGL + +
Sbjct: 108 RF-------YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---E 154
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
D + G+ Y+APE + D + G++M EM G+ P
Sbjct: 155 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
N A K + ++ E + + +RH LV + + NE ++YEFM
Sbjct: 78 NFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED----DNEM-VMIYEFMSG 132
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L + DE N K++ + + V L ++H + + VH DLKP N++
Sbjct: 133 GEL---FEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFT 183
Query: 706 NEMVAHVG--DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
+ + DFGL+ L P Q S G+ + APE V + D +S G+L
Sbjct: 184 TKRSNELKLIDFGLTAHL---DPKQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
Query: 764 MLEMFTGKRP 773
+ +G P
Sbjct: 240 SYILLSGLSP 249
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 29/210 (13%)
Query: 594 LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLN 653
+Q RG + E L+ + H N+VK++ +D + +V+E + G +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLV---EVLDDPNEDHLYMVFELVNQGPVMEVPT 130
Query: 654 QKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713
K ++Q R D+ +EYLH+ I+H D+KPSN+L+ + +
Sbjct: 131 LKPLSEDQ-------ARFYFQ-DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIA 179
Query: 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-----STHGDEYSFGILMLEMF 768
DFG+S + S G+ ++APE +L E D ++ G+ +
Sbjct: 180 DFGVSNEFKGSD---ALLSNTVGTPAFMAPE--SLSETRKIFSGKALDVWAMGVTLYCFV 234
Query: 769 TGKRPTDDMFEEGLSLH---KYAKMGLPDQ 795
G+ P M E + LH K + PDQ
Sbjct: 235 FGQCPF--MDERIMCLHSKIKSQALEFPDQ 262
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%)
Query: 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT 690
+ +++ +V E+MP G L N L D + K +V L+ +H
Sbjct: 145 QDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKF-------YTAEVVLALDAIHS---M 193
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPEY-- 745
++H D+KP N+LLD + DFG + D+T ++G Y++PE
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTCMKM-----DETGMVHCDTAVGTPDYISPEVLK 248
Query: 746 --GALGEVSTHGDEYSFGILMLEMFTGKRP 773
G G D +S G+ + EM G P
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 690 TSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTS-TSRVKGSIGYVAPEYGAL 748
++++H DLKPSN+L+++ V DFGL+R++ +++ D + T + G + +VA +
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190
Query: 749 GEV-------STHGDEYSFGILMLEMFTGKRP 773
EV S D +S G ++ E+F +RP
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFL-RRP 221
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 657 DEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EMVAHVG 713
DE R K N + I V + + YLH H +IVH DLKP N+LL++ + + +
Sbjct: 125 DEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIV 181
Query: 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
DFGLS + +Q G+ Y+APE + D +S G+++ + G P
Sbjct: 182 DFGLSAVFE----NQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 23/199 (11%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKII-----TSCSSIDTRGN--EFK 636
+ VA+K + L + K + E + +R + H N+VK+ + D G+ E
Sbjct: 36 DKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95
Query: 637 A--LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVH 694
+ +V E+M L N L Q P L RL + L+Y+H +++H
Sbjct: 96 SVYIVQEYM-ETDLANVLEQG-------PLLEEHARL-FMYQLLRGLKYIH---SANVLH 143
Query: 695 CDLKPSNVLLDNE-MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST 753
DLKP+N+ ++ E +V +GDFGL+R++ + + S + Y +P T
Sbjct: 144 RDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYT 203
Query: 754 HG-DEYSFGILMLEMFTGK 771
D ++ G + EM TGK
Sbjct: 204 KAIDMWAAGCIFAEMLTGK 222
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M GSL+ L + R ++ ++SIA V L YL I+H D
Sbjct: 107 SICMEHMDGGSLDQVLKKA-----GRIPEQILGKVSIA--VIKGLTYLREK--HKIMHRD 157
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+KPSN+L+++ + DFG+S L D + + G+ Y++PE S D
Sbjct: 158 VKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQGTHYSVQSD 212
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+ ++EM G+ P
Sbjct: 213 IWSMGLSLVEMAVGRYP 229
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 583 EETN-VAVKVLDLQQRGASKSFIAECEALRS-IRHRNLVKIITSCSSIDTRGNEFKALVY 640
E+T VA+K L + G + LR+ ++H N+V ++ + ++ ++++
Sbjct: 37 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-----DQPLSMIF 91
Query: 641 EFMPNGSLENWLNQK---------EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS 691
+ +G L +L + +D++ + L + + +A +EYL H
Sbjct: 92 SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---H 148
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGA 747
+VH DL NVL+ +++ + D GL R ++ ++ G+ I ++APE
Sbjct: 149 VVHKDLATRNVLVYDKLNVKISDLGLFREVY-----AADYYKLLGNSLLPIRWMAPEAIM 203
Query: 748 LGEVSTHGDEYSFGILMLEMFT-GKRP 773
G+ S D +S+G+++ E+F+ G +P
Sbjct: 204 YGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
LEYLH +H D+K N+LL+ E A + DFG++ L D + V G+ +
Sbjct: 138 LEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDX---MAKRNXVIGTPFW 191
Query: 741 VAPEYGALGEVSTH--GDEYSFGILMLEMFTGKRPTDDM 777
+APE + E+ + D +S GI +EM GK P D+
Sbjct: 192 MAPE--VIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 54 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 108
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 109 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 156
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 157 NLLIDQQGYIQVTDFGFAKRV------KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 210
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 211 GVLIYEMAAGYPP 223
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLLIDQQGYIKVADFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 95/202 (47%), Gaps = 28/202 (13%)
Query: 583 EETN-VAVKVLDLQQRGASKSFIAECEALRS-IRHRNLVKIITSCSSIDTRGNEFKALVY 640
E+T VA+K L + G + LR+ ++H N+V ++ + ++ ++++
Sbjct: 54 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-----DQPLSMIF 108
Query: 641 EFMPNGSLENWLNQK---------EDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS 691
+ +G L +L + +D++ + L + + +A +EYL H
Sbjct: 109 SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---H 165
Query: 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS----IGYVAPEYGA 747
+VH DL NVL+ +++ + D GL R ++ ++ G+ I ++APE
Sbjct: 166 VVHKDLATRNVLVYDKLNVKISDLGLFREVY-----AADYYKLLGNSLLPIRWMAPEAIM 220
Query: 748 LGEVSTHGDEYSFGILMLEMFT 769
G+ S D +S+G+++ E+F+
Sbjct: 221 YGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M GSL+ L + R ++ ++SIA V L YL I+H D
Sbjct: 80 SICMEHMDGGSLDQVLKKA-----GRIPEQILGKVSIA--VIKGLTYLREK--HKIMHRD 130
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+KPSN+L+++ + DFG+S L D + + G+ Y++PE S D
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+ ++EM G+ P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M GSL+ L + R ++ ++SIA V L YL I+H D
Sbjct: 80 SICMEHMDGGSLDQVLKKA-----GRIPEQILGKVSIA--VIKGLTYLREK--HKIMHRD 130
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+KPSN+L+++ + DFG+S L D + + G+ Y++PE S D
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+ ++EM G+ P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 61 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 115
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 116 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 163
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 164 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 218 GVLIYEMAAGYPP 230
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 89 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 143
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 144 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 191
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 246 GVLIYEMAAGYPP 258
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M GSL+ L ++ R ++ ++SIA V L YL I+H D
Sbjct: 80 SICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIA--VIKGLTYLREK--HKIMHRD 130
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+KPSN+L+++ + DFG+S L D + + G+ Y++PE S D
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+ ++EM G+ P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M GSL+ L ++ R ++ ++SIA V L YL I+H D
Sbjct: 142 SICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIA--VIKGLTYLREK--HKIMHRD 192
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+KPSN+L+++ + DFG+S L D + + G+ Y++PE S D
Sbjct: 193 VKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQGTHYSVQSD 247
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+ ++EM G+ P
Sbjct: 248 IWSMGLSLVEMAVGRYP 264
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 69 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 123
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 171
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 69 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 123
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 171
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 69 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 123
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 171
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 61 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 115
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 116 VPGGEMFSHLRRIGRFXEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 163
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 164 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 218 GVLIYEMAAGYPP 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M GSL+ L + R ++ ++SIA V L YL I+H D
Sbjct: 80 SICMEHMDGGSLDQVLKKA-----GRIPEQILGKVSIA--VIKGLTYLREK--HKIMHRD 130
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+KPSN+L+++ + DFG+S L D + + G+ Y++PE S D
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+ ++EM G+ P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + L+YLH ++V+ DLK N++LD + + DFGL + + D +
Sbjct: 256 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFC 310
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ Y+APE + D + G++M EM G+ P
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 69 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 123
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 171
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 20/192 (10%)
Query: 587 VAVKVLD---LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VA+K++D + + G + E + ++H +++++ + + LV E
Sbjct: 39 VAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-----SNYVYLVLEMC 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
NG + +L + ++ + M ++ + +L YLH H I+H DL SN+L
Sbjct: 94 HNGEMNRYLKNRVKPFSENEARHFMHQI-----ITGML-YLHSH---GILHRDLTLSNLL 144
Query: 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGIL 763
L M + DFGL+ L P + + + G+ Y++PE D +S G +
Sbjct: 145 LTRNMNIKIADFGLATQL--KMPHEKHYT-LCGTPNYISPEIATRSAHGLESDVWSLGCM 201
Query: 764 MLEMFTGKRPTD 775
+ G+ P D
Sbjct: 202 FYTLLIGRPPFD 213
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 69 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 123
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 124 VPGGEMFSHLRRIGRFXEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 171
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M GSL+ L ++ R ++ ++SIA V L YL I+H D
Sbjct: 80 SICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSIA--VIKGLTYLREK--HKIMHRD 130
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
+KPSN+L+++ + DFG+S L D + + G+ Y++PE S D
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+ ++EM G+ P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 VPGGEMFSHLRRIGRFXEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 69 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 123
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 171
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRV------KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
+P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 VPGGEMFSHLRRIGRFXEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+L+D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + L+YLH ++V+ DLK N++LD + + DFGL + + D +
Sbjct: 259 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFC 313
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ Y+APE + D + G++M EM G+ P
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + +T
Sbjct: 168 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGATWT 218
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 682 EYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL-SRLLHDNSPDQTSTSRVKGSIGY 740
+YLH + ++H DLK N+ L+ ++ +GDFGL +++ +D +T + G+ Y
Sbjct: 131 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT----LCGTPNY 183
Query: 741 VAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+APE + S D +S G +M + GK P
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 682 EYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL-SRLLHDNSPDQTSTSRVKGSIGY 740
+YLH + ++H DLK N+ L+ ++ +GDFGL +++ +D +T + G+ Y
Sbjct: 135 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT----LCGTPNY 187
Query: 741 VAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+APE + S D +S G +M + GK P
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 APGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+++D + V DFGL++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLMIDQQGYIQVTDFGLAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV------KGRTWX 198
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 682 EYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL-SRLLHDNSPDQTSTSRVKGSIGY 740
+YLH + ++H DLK N+ L+ ++ +GDFGL +++ +D +T + G+ Y
Sbjct: 131 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT----LCGTPNY 183
Query: 741 VAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+APE + S D +S G +M + GK P
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 588 AVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
AVK+++ Q E E L + HRN++++I D LV+E M G
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRF-----YLVFEKMRGG 96
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
S+ + +++ R N ++ + DVA+ L++LH+ I H DLKP N+L ++
Sbjct: 97 SILSHIHK-------RRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEH 146
Query: 707 E---MVAHVGDFGLS---RLLHDNSPDQTSTSRVK-GSIGYVAPE-YGALGEVST----H 754
+ DFGL +L D SP T GS Y+APE A E ++
Sbjct: 147 PNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKR 206
Query: 755 GDEYSFGILMLEMFTGKRP 773
D +S G+++ + +G P
Sbjct: 207 CDLWSLGVILYILLSGYPP 225
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + L+YLH ++V+ DLK N++LD + + DFGL + + D +
Sbjct: 116 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFC 170
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ Y+APE + D + G++M EM G+ P
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 587 VAVKVLDLQ-QRGASKSFIAECEALRSIRHRNLV---KIITSCSSIDTRGNEFKALVYEF 642
VA+K + L+ + GA + I E L+ ++H N+V II + S+ LV+E+
Sbjct: 30 VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSL--------TLVFEY 81
Query: 643 MPNGSLENWLNQKEDEQN-QRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701
+ + L+ +L+ + N KL L Q L L Y H ++H DLKP N
Sbjct: 82 L-DKDLKQYLDDCGNIINMHNVKLFLFQLL-------RGLAYCHRQ---KVLHRDLKPQN 130
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYS 759
+L++ + DFGL+R + P +T + V ++ Y P+ LG + ST D +
Sbjct: 131 LLINERGELKLADFGLARA--KSIPTKTYDNEVV-TLWYRPPDI-LLGSTDYSTQIDMWG 186
Query: 760 FGILMLEMFTGK 771
G + EM TG+
Sbjct: 187 VGCIFYEMATGR 198
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 142 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 192
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 193 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + L+YLH ++V+ DLK N++LD + + DFGL + + D +
Sbjct: 117 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFC 171
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ Y+APE + D + G++M EM G+ P
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 676 DVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK 735
++ + L+YLH ++V+ DLK N++LD + + DFGL + + D +
Sbjct: 118 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFC 172
Query: 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
G+ Y+APE + D + G++M EM G+ P
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 587 VAVKVLDLQQRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
+ + L +RG S+ I E LR IRH N IIT + + + L+ E +
Sbjct: 45 IKKRRLSSSRRGVSREEIEREVNILREIRHPN---IITLHDIFENKTD--VVLILELVSG 99
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L +KE L Q +L+ +H+ I H DLKP N++L
Sbjct: 100 GELFDFLAEKESLTEDEATQFLKQ----------ILDGVHYLHSKRIAHFDLKPENIMLL 149
Query: 706 NEMVAH----VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
++ V + + DFG++ + + + G+ +VAPE + D +S G
Sbjct: 150 DKNVPNPRIKLIDFGIAHKIEAGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205
Query: 762 ILMLEMFTGKRP 773
++ + +G P
Sbjct: 206 VITYILLSGASP 217
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 41/210 (19%)
Query: 588 AVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGS 647
AVK++D +R ++ E E L +R+ IIT D ++ +V E M G
Sbjct: 51 AVKIIDKSKRDPTE----EIEIL--LRYGQHPNIITLKDVYD--DGKYVYVVTELMKGGE 102
Query: 648 L-ENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
L + L QK + + ++ + +EYLH +VH DLKPSN+L +
Sbjct: 103 LLDKILRQKFFSEREAS--------AVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVD 151
Query: 707 EM----VAHVGDFGLSRLLHDN-----SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
E + DFG ++ L +P T+ +VAPE D
Sbjct: 152 ESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN--------FVAPEVLERQGYDAACDI 203
Query: 758 YSFGILMLEMFTGKRP----TDDMFEEGLS 783
+S G+L+ M TG P DD EE L+
Sbjct: 204 WSLGVLLYTMLTGYTPFANGPDDTPEEILA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 198
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 134 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV------KGRTWX 184
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 185 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 APGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+++D + V DFGL++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLMIDQQGYIKVTDFGLAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 582 TEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITS-CSSIDTRGNEFKALVY 640
E VA+K + +R ++ E + +R ++H N+V + S+ D + F LV
Sbjct: 62 VESDEVAIKKVLQDKRFKNR----ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
E++P + + +Q M L I + + +L L + I H D+KP
Sbjct: 118 EYVPETVYRASRHYAKLKQT-------MPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQ 170
Query: 701 NVLLDNEM-VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE--YGALGEVSTHGDE 757
N+LLD V + DFG +++L P+ + S Y APE +GA +T+ D
Sbjct: 171 NLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC----SRYYRAPELIFGATN-YTTNIDI 225
Query: 758 YSFGILMLEMFTGK 771
+S G +M E+ G+
Sbjct: 226 WSTGCVMAELMQGQ 239
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 15/93 (16%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
LEYLH H I+H DLKP+N+LLD V + DFGL++ SP++ +V + Y
Sbjct: 125 LEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQVV-TRWY 178
Query: 741 VAPE--YGALGEVSTHG---DEYSFGILMLEMF 768
APE +GA +G D ++ G ++ E+
Sbjct: 179 RAPELLFGA----RMYGVGVDMWAVGCILAELL 207
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 168 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 218
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E LR IRH N IIT + + + L+ E + G L ++L +
Sbjct: 68 RRGVSREEIEREVNILREIRHPN---IITLHDIFENKTD--VVLILELVSGGELFDFLAE 122
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH--- 711
KE L Q +L+ +H+ I H DLKP N++L ++ V +
Sbjct: 123 KESLTEDEATQFLKQ----------ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 172
Query: 712 -VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFG++ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 173 KLIDFGIAHKIEAGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
Query: 771 KRP 773
P
Sbjct: 229 ASP 231
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 673 IAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS-RLLHDNSPDQTST 731
IA+ + LE+LH S++H D+KPSNVL++ DFG+S L+ D + D +
Sbjct: 141 IAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAG 198
Query: 732 SRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTD 775
+ + + PE G S D +S GI +E+ + P D
Sbjct: 199 CKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYD 241
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 588 AVKVLDLQQRGASKSFIAECEA--LRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
A K+++ ++ A E EA R ++H N+V++ S S F LV++ +
Sbjct: 33 AAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-----EGFHYLVFDLVTG 87
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCH-TSIVHCDLKPSNVLL 704
G L + +E + + +LE ++H CH IVH DLKP N+LL
Sbjct: 88 GELFEDIVARE----------YYSEADASHCIQQILESVNH-CHLNGIVHRDLKPENLLL 136
Query: 705 DNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
++ + DFGL+ + DQ + G+ GY++PE D ++ G
Sbjct: 137 ASKSKGAAVKLADFGLAIEVQG---DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACG 193
Query: 762 ILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794
+++ + G P D E+ L++ K G D
Sbjct: 194 VILYILLVGYPPFWD--EDQHRLYQQIKAGAYD 224
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK+ ++ +S+ E E +++ RH N++ I + + + + LV ++
Sbjct: 68 VAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL-WLVSDYHE 123
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-----HTSIVHCDLKP 699
+GSL ++LN R + + + +A+ A+ L +LH +I H DLK
Sbjct: 124 HGSLFDYLN--------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 175
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTS---RVKGSIGYVAPE 744
N+L+ + D GL+ + HD++ D + RV G+ Y+APE
Sbjct: 176 KNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTKRYMAPE 221
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 588 AVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
AVKV+ ++Q+ +S + E + L+ + H N++K+ + +G + LV E
Sbjct: 61 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY---EFFEDKG--YFYLVGEVYT 115
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
G L DE R + + + I V + + Y+H + IVH DLKP N+LL
Sbjct: 116 GGELF-------DEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLL 165
Query: 705 DN---EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPEYGALGEVSTHGDEY 758
++ + + DFGLS ++ ++K IG Y+APE G D +
Sbjct: 166 ESKSKDANIRIIDFGLSTHFE-------ASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVW 217
Query: 759 SFGILMLEMFTGKRP 773
S G+++ + +G P
Sbjct: 218 STGVILYILLSGCPP 232
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK+ ++ +S+ E E +++ RH N++ I + + + + LV ++
Sbjct: 55 VAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL-WLVSDYHE 110
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-----HTSIVHCDLKP 699
+GSL ++LN R + + + +A+ A+ L +LH +I H DLK
Sbjct: 111 HGSLFDYLN--------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 162
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTS---RVKGSIGYVAPE 744
N+L+ + D GL+ + HD++ D + RV G+ Y+APE
Sbjct: 163 KNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTKRYMAPE 208
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 587 VAVKVLDLQQRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
+ + L +RG S+ I E LR IRH N IIT + + + L+ E +
Sbjct: 38 IKKRRLSSSRRGVSREEIEREVNILREIRHPN---IITLHDIFENKTD--VVLILELVSG 92
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
G L ++L +KE L Q +L+ +H+ I H DLKP N++L
Sbjct: 93 GELFDFLAEKESLTEDEATQFLKQ----------ILDGVHYLHSKRIAHFDLKPENIMLL 142
Query: 706 NEMVAH----VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
++ V + + DFG++ + + + G+ +VAPE + D +S G
Sbjct: 143 DKNVPNPRIKLIDFGIAHKIEAGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 198
Query: 762 ILMLEMFTGKRP 773
++ + +G P
Sbjct: 199 VITYILLSGASP 210
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRP-- 663
E + LR +RH+N+++++ D NE K +Y M E + ++ + P
Sbjct: 56 EIQLLRRLRHKNVIQLV------DVLYNEEKQKMYMVM-----EYCVCGMQEMLDSVPEK 104
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHD 723
+ + Q + + LEYLH IVH D+KP N+LL + G++ LH
Sbjct: 105 RFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161
Query: 724 NSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG---DEYSFGILMLEMFTGKRP 773
+ D T + +GS + PE A G + G D +S G+ + + TG P
Sbjct: 162 FAADDTCRTS-QGSPAFQPPEI-ANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK+ ++ +S+ E E +++ RH N++ I + + + + LV ++
Sbjct: 32 VAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL-WLVSDYHE 87
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-----HTSIVHCDLKP 699
+GSL ++LN R + + + +A+ A+ L +LH +I H DLK
Sbjct: 88 HGSLFDYLN--------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 139
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTS---RVKGSIGYVAPE 744
N+L+ + D GL+ + HD++ D + RV G+ Y+APE
Sbjct: 140 KNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTKRYMAPE 185
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 588 AVKVLDLQQRGASKSFIAECEA--LRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
A K+++ ++ A E EA R ++H N+V++ S S F LV++ +
Sbjct: 33 AAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-----EGFHYLVFDLVTG 87
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCH-TSIVHCDLKPSNVLL 704
G L + +E + + +LE ++H CH IVH DLKP N+LL
Sbjct: 88 GELFEDIVARE----------YYSEADASHCIQQILESVNH-CHLNGIVHRDLKPENLLL 136
Query: 705 DNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
++ + DFGL+ + DQ + G+ GY++PE D ++ G
Sbjct: 137 ASKSKGAAVKLADFGLAIEVQG---DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACG 193
Query: 762 ILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794
+++ + G P D E+ L++ K G D
Sbjct: 194 VILYILLVGYPPFWD--EDQHRLYQQIKAGAYD 224
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK+ ++ +S+ E E +++ RH N++ I + + + + LV ++
Sbjct: 35 VAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL-WLVSDYHE 90
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-----HTSIVHCDLKP 699
+GSL ++LN R + + + +A+ A+ L +LH +I H DLK
Sbjct: 91 HGSLFDYLN--------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 142
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTS---RVKGSIGYVAPE 744
N+L+ + D GL+ + HD++ D + RV G+ Y+APE
Sbjct: 143 KNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTKRYMAPE 188
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 677 VANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKG 736
A ++ L H + +V+ DLKP+N+LLD + D GL+ P + G
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----G 351
Query: 737 SIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRP 773
+ GY+APE G + D +S G ++ ++ G P
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 36/197 (18%)
Query: 588 AVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
AVKV+ ++Q+ +S + E + L+ + H N++K+ + +G + LV E
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY---EFFEDKG--YFYLVGEVYT 109
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
G L DE R + + + I V + + Y+H + IVH DLKP N+LL
Sbjct: 110 GGELF-------DEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLL 159
Query: 705 DN---EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPE--YGALGEVSTHGD 756
++ + + DFGLS ++ ++K IG Y+APE +G E D
Sbjct: 160 ESKSKDANIRIIDFGLSTHFE-------ASKKMKDKIGTAYYIAPEVLHGTYDEKC---D 209
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+++ + +G P
Sbjct: 210 VWSTGVILYILLSGCPP 226
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
LV + MP G L + + + R +L L+ + +A + YL +VH DL
Sbjct: 95 LVTQLMPYGCLLDHVRE------NRGRLGSQDLLNWCMQIAKGMSYLED---VRLVHRDL 145
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
NVL+ + + DFGL+RLL D + K I ++A E + D
Sbjct: 146 AARNVLVKSPNHVKITDFGLARLL-DIDETEYHADGGKVPIKWMALESILRRRFTHQSDV 204
Query: 758 YSFGILMLEMFT-GKRPTD--------DMFEEGLSL 784
+S+G+ + E+ T G +P D D+ E+G L
Sbjct: 205 WSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL 240
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 677 VANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKG 736
A ++ L H + +V+ DLKP+N+LLD + D GL+ P + G
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----G 352
Query: 737 SIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRP 773
+ GY+APE G + D +S G ++ ++ G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 677 VANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKG 736
A ++ L H + +V+ DLKP+N+LLD + D GL+ P + G
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----G 352
Query: 737 SIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRP 773
+ GY+APE G + D +S G ++ ++ G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 677 VANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKG 736
A ++ L H + +V+ DLKP+N+LLD + D GL+ P + G
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----G 352
Query: 737 SIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRP 773
+ GY+APE G + D +S G ++ ++ G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT 690
+ + + +V E+MP G L N ++ + + R A +V L+ +H
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK-------WARFYTA-EVVLALDAIHS---M 192
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY----G 746
+H D+KP N+LLD + DFG + N G+ Y++PE G
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM--NKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 747 ALGEVSTHGDEYSFGILMLEMFTGKRP 773
G D +S G+ + EM G P
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 605 AECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPK 664
AE E L+S+ H N++KI + N + +V E G L L + Q +
Sbjct: 69 AEIEVLKSLDHPNIIKIF---EVFEDYHNMY--IVMETCEGGEL---LERIVSAQARGKA 120
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EMVAHVGDFGLSRLL 721
L+ + + N L Y H +VH DLKP N+L + + DFGL+ L
Sbjct: 121 LSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177
Query: 722 HDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
D+ ST+ G+ Y+APE +V+ D +S G++M + TG P
Sbjct: 178 ---KSDEHSTN-AAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK+ ++ +S+ E E +++ RH N++ I + + + + LV ++
Sbjct: 29 VAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL-WLVSDYHE 84
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-----HTSIVHCDLKP 699
+GSL ++LN R + + + +A+ A+ L +LH +I H DLK
Sbjct: 85 HGSLFDYLN--------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 136
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTS---RVKGSIGYVAPE 744
N+L+ + D GL+ + HD++ D + RV G+ Y+APE
Sbjct: 137 KNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTKRYMAPE 182
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
VAVK+ ++ +S+ E E +++ RH N++ I + + + + LV ++
Sbjct: 30 VAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL-WLVSDYHE 85
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-----HTSIVHCDLKP 699
+GSL ++LN R + + + +A+ A+ L +LH +I H DLK
Sbjct: 86 HGSLFDYLN--------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 137
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTS---RVKGSIGYVAPE 744
N+L+ + D GL+ + HD++ D + RV G+ Y+APE
Sbjct: 138 KNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTKRYMAPE 183
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+++D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+++D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT 690
+ + + +V E+MP G L N ++ + + R A +V L+ +H
Sbjct: 139 QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK-------WARFYTA-EVVLALDAIHS---M 187
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY----G 746
+H D+KP N+LLD + DFG + N G+ Y++PE G
Sbjct: 188 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM--NKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 747 ALGEVSTHGDEYSFGILMLEMFTGKRP 773
G D +S G+ + EM G P
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDN 724
L+ Q +I ++ L+YLH +H D+K +NVLL + DFG++ L D
Sbjct: 121 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 177
Query: 725 SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM 777
Q + G+ ++APE + D +S GI +E+ G+ P ++
Sbjct: 178 ---QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT 690
+ + + +V E+MP G L N ++ + + R A +V L+ +H
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK-------WARFYTA-EVVLALDAIHS---M 192
Query: 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY----G 746
+H D+KP N+LLD + DFG + N G+ Y++PE G
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM--NKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 747 ALGEVSTHGDEYSFGILMLEMFTGKRP 773
G D +S G+ + EM G P
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDN 724
L+ Q +I ++ L+YLH +H D+K +NVLL + DFG++ L D
Sbjct: 101 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 725 SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM 777
Q + G+ ++APE + D +S GI +E+ G+ P ++
Sbjct: 158 ---QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 25/172 (14%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E L+ I+H N+V + I + LV + + G L + + ++ + L
Sbjct: 56 EIAVLKKIKHENIVTL----EDIYESTTHY-YLVMQLVSGGELFDRILERGVYTEKDASL 110
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL----DNEMVAHVGDFGLSRLL 721
+ Q LS ++YLH + IVH DLKP N+L +N + + DFGLS++
Sbjct: 111 VIQQVLS-------AVKYLHEN---GIVHRDLKPENLLYLTPEENSKIM-ITDFGLSKME 159
Query: 722 HDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ S G+ GYVAPE A S D +S G++ + G P
Sbjct: 160 QNGI-----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDN 724
L+ Q +I ++ L+YLH +H D+K +NVLL + DFG++ L D
Sbjct: 101 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 725 SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM 777
Q + G+ ++APE + D +S GI +E+ G+ P ++
Sbjct: 158 ---QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 586 NVAVKVLD----LQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L L +R A ++E + L + H N+V ++ +C T G ++
Sbjct: 78 TVAVKMLKPSAHLTEREA---LMSELKVLSYLGNHMNIVNLLGAC----TIGGP-TLVIT 129
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPKL--------NLMQRLSIAIDVANVLEYLHHHCH 689
E+ G L N+L +K D P + +L LS + VA + +L
Sbjct: 130 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---AS 186
Query: 690 TSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG 749
+ +H DL N+LL + + + DFGL+R + ++S + + + ++APE
Sbjct: 187 KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDS-NYVVKGNARLPVKWMAPESIFNC 245
Query: 750 EVSTHGDEYSFGILMLEMFT-GKRPTDDM 777
+ D +S+GI + E+F+ G P M
Sbjct: 246 VYTFESDVWSYGIFLWELFSLGSSPYPGM 274
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 586 NVAVKVLD----LQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L L +R A ++E + L + H N+V ++ +C T G ++
Sbjct: 55 TVAVKMLKPSAHLTEREA---LMSELKVLSYLGNHMNIVNLLGAC----TIGGP-TLVIT 106
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPKL--------NLMQRLSIAIDVANVLEYLHHHCH 689
E+ G L N+L +K D P + +L LS + VA + +L
Sbjct: 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---AS 163
Query: 690 TSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG 749
+ +H DL N+LL + + + DFGL+R + ++S + + + ++APE
Sbjct: 164 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFNC 222
Query: 750 EVSTHGDEYSFGILMLEMFT-GKRPTDDM 777
+ D +S+GI + E+F+ G P M
Sbjct: 223 VYTFESDVWSYGIFLWELFSLGSSPYPGM 251
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 23/107 (21%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ R
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------------R 190
Query: 734 VKGSIGYV--APEYGALGEVSTHG-----DEYSFGILMLEMFTGKRP 773
VKG + PEY A + + G D ++ G+L+ EM G P
Sbjct: 191 VKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 40/200 (20%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K++ + I L+ F
Sbjct: 49 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKVVNHKNII--------GLLNVFT 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 94 PQKSLEEF--QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV----- 751
LKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVILGMG 201
Query: 752 -STHGDEYSFGILMLEMFTG 770
+ D +S G++M EM G
Sbjct: 202 YKENVDIWSVGVIMGEMIKG 221
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 36/197 (18%)
Query: 588 AVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
AVKV+ ++Q+ +S + E + L+ + H N++K+ + +G + LV E
Sbjct: 78 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY---EFFEDKG--YFYLVGEVYT 132
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
G L DE R + + + I V + + Y+H + IVH DLKP N+LL
Sbjct: 133 GGELF-------DEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLL 182
Query: 705 DN---EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPE--YGALGEVSTHGD 756
++ + + DFGLS ++ ++K IG Y+APE +G E D
Sbjct: 183 ESKSKDANIRIIDFGLSTHFE-------ASKKMKDKIGTAYYIAPEVLHGTYDEKC---D 232
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+++ + +G P
Sbjct: 233 VWSTGVILYILLSGCPP 249
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 36/197 (18%)
Query: 588 AVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
AVKV+ ++Q+ +S + E + L+ + H N++K+ + +G + LV E
Sbjct: 79 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY---EFFEDKG--YFYLVGEVYT 133
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
G L DE R + + + I V + + Y+H + IVH DLKP N+LL
Sbjct: 134 GGELF-------DEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLL 183
Query: 705 DN---EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPE--YGALGEVSTHGD 756
++ + + DFGLS ++ ++K IG Y+APE +G E D
Sbjct: 184 ESKSKDANIRIIDFGLSTHFE-------ASKKMKDKIGTAYYIAPEVLHGTYDEKC---D 233
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+++ + +G P
Sbjct: 234 VWSTGVILYILLSGCPP 250
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 672 SIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST 731
+I ++ L+YLH +H D+K +NVLL + + DFG++ L D Q
Sbjct: 120 TILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDT---QIKR 173
Query: 732 SRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM 777
+ G+ ++APE D +S GI +E+ G+ P D+
Sbjct: 174 NXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 69 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 123
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 124 APGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 171
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+++D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+++D + V DFG ++ + + T
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV------KGRTWX 198
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 586 NVAVKVLD----LQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L L +R A ++E + L + H N+V ++ +C T G ++
Sbjct: 78 TVAVKMLKPSAHLTEREA---LMSELKVLSYLGNHMNIVNLLGAC----TIGGP-TLVIT 129
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPKL--------NLMQRLSIAIDVANVLEYLHHHCH 689
E+ G L N+L +K D P + +L LS + VA + +L
Sbjct: 130 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---AS 186
Query: 690 TSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG 749
+ +H DL N+LL + + + DFGL+R + ++S + + + ++APE
Sbjct: 187 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFNC 245
Query: 750 EVSTHGDEYSFGILMLEMFT-GKRPTDDM 777
+ D +S+GI + E+F+ G P M
Sbjct: 246 VYTFESDVWSYGIFLWELFSLGSSPYPGM 274
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+++D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 586 NVAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
+ A+K+LD Q+ K + E L+++ LVK+ S + N +V E+
Sbjct: 68 HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSNLYMVMEY 122
Query: 643 MPNGSLENWLNQ--KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
P G + + L + + E + R A + EYLH +++ DLKP
Sbjct: 123 APGGEMFSHLRRIGRFSEPHAR---------FYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
N+++D + V DFG ++ + + T + G+ Y+APE + D ++
Sbjct: 171 NLMIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 761 GILMLEMFTGKRP 773
G+L+ EM G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 586 NVAVKVLD----LQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L L +R A ++E + L + H N+V ++ +C T G ++
Sbjct: 73 TVAVKMLKPSAHLTEREA---LMSELKVLSYLGNHMNIVNLLGAC----TIGGP-TLVIT 124
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPKL--------NLMQRLSIAIDVANVLEYLHHHCH 689
E+ G L N+L +K D P + +L LS + VA + +L
Sbjct: 125 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---AS 181
Query: 690 TSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG 749
+ +H DL N+LL + + + DFGL+R + ++S + + + ++APE
Sbjct: 182 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFNC 240
Query: 750 EVSTHGDEYSFGILMLEMFT-GKRPTDDM 777
+ D +S+GI + E+F+ G P M
Sbjct: 241 VYTFESDVWSYGIFLWELFSLGSSPYPGM 269
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+++D + V DFG ++ + + T
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV------KGRTWX 198
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+++D + V DFG ++ + + T
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV------KGRTWX 198
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 40/200 (20%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K++ + I L+ F
Sbjct: 49 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKVVNHKNII--------GLLNVFT 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 94 PQKSLEEF--QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV----- 751
LKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVILGMG 201
Query: 752 -STHGDEYSFGILMLEMFTG 770
+ D +S G++M EM G
Sbjct: 202 YKENVDIWSVGVIMGEMIKG 221
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDN 724
L+ Q +I ++ L+YLH +H D+K +NVLL + DFG++ L D
Sbjct: 116 LDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172
Query: 725 SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM 777
Q + G+ ++APE + D +S GI +E+ G+ P ++
Sbjct: 173 ---QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 690 TSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPD-------QTSTSRVKGSIGYVA 742
++++H DLKPSN+L+++ V DFGL+R++ +++ D Q+ + + Y A
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRA 190
Query: 743 PEYG-ALGEVSTHGDEYSFGILMLEMFTGKRP 773
PE + S D +S G ++ E+F +RP
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFL-RRP 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE + D ++ G+L+ +M G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 682 EYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYV 741
+YLH + ++H DLK N+ L+ ++ +GDFGL+ + D + G+ Y+
Sbjct: 155 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY---DGERKKVLCGTPNYI 208
Query: 742 APEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
APE + S D +S G +M + GK P
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 682 EYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYV 741
+YLH + ++H DLK N+ L+ ++ +GDFGL+ + D + G+ Y+
Sbjct: 153 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY---DGERKKVLCGTPNYI 206
Query: 742 APEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
APE + S D +S G +M + GK P
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 586 NVAVKVLD----LQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKALVY 640
VAVK+L L +R A ++E + L + H N+V ++ +C T G ++
Sbjct: 71 TVAVKMLKPSAHLTEREA---LMSELKVLSYLGNHMNIVNLLGAC----TIGGP-TLVIT 122
Query: 641 EFMPNGSLENWLNQKEDE---QNQRPKL--------NLMQRLSIAIDVANVLEYLHHHCH 689
E+ G L N+L +K D P + +L LS + VA + +L
Sbjct: 123 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---AS 179
Query: 690 TSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG 749
+ +H DL N+LL + + + DFGL+R + ++S + + + ++APE
Sbjct: 180 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFNC 238
Query: 750 EVSTHGDEYSFGILMLEMFT-GKRPTDDM 777
+ D +S+GI + E+F+ G P M
Sbjct: 239 VYTFESDVWSYGIFLWELFSLGSSPYPGM 267
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL-SRLLHDNSPDQTSTSRVKGSIG 739
++YLH++ ++H DLK N+ L+++M +GDFGL +++ D +T + G+
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT----LCGTPN 207
Query: 740 YVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
Y+APE S D +S G ++ + GK P
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 682 EYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYV 741
+YLH + ++H DLK N+ L+ ++ +GDFGL+ + D + G+ Y+
Sbjct: 129 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY---DGERKKVLCGTPNYI 182
Query: 742 APEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
APE + S D +S G +M + GK P
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 44/232 (18%)
Query: 582 TEETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
T ET VA+K + L+ + G + I E L+ ++HRN++++ + N L+
Sbjct: 58 TNET-VAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH-----NHRLHLI 111
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLK 698
+E+ N L+ ++++ D + K L Q I+ N CH+ +H DLK
Sbjct: 112 FEYAEN-DLKKYMDKNPDVSMRVIKSFLYQ----LINGVNF-------CHSRRCLHRDLK 159
Query: 699 PSNVLL-----DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EV 751
P N+LL V +GDFGL+R P + T + ++ Y PE LG
Sbjct: 160 PQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEII-TLWYRPPEI-LLGSRHY 215
Query: 752 STHGDEYSFGILMLEM------FTGKRPTDDMFEEGLSLHKYAKMGLPDQVA 797
ST D +S + EM F G D +F+ + +GLPD
Sbjct: 216 STSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK------IFEVLGLPDDTT 261
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
++YLH++ ++H DLK N+ L+++M +GDFGL+ + D + G+ Y
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF---DGERKKXLCGTPNY 208
Query: 741 VAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+APE S D +S G ++ + GK P
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
++YLH++ ++H DLK N+ L+++M +GDFGL+ + D + G+ Y
Sbjct: 139 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF---DGERKKDLCGTPNY 192
Query: 741 VAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+APE S D +S G ++ + GK P
Sbjct: 193 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 588 AVKVLDLQQRGASKSFIAECEA--LRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
A K+++ ++ A E EA R ++H N+V++ S S F LV++ +
Sbjct: 33 AAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISE-----EGFHYLVFDLVTG 87
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNVLL 704
G L + +E + Q L + HCH +VH DLKP N+LL
Sbjct: 88 GELFEDIVAREYYSEADASHCIQQILEAVL-----------HCHQMGVVHRDLKPENLLL 136
Query: 705 DNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
++ + DFGL+ + DQ + G+ GY++PE D ++ G
Sbjct: 137 ASKCKGAAVKLADFGLAI---EVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACG 193
Query: 762 ILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794
+++ + G P D E+ L++ K G D
Sbjct: 194 VILYILLVGYPPFWD--EDQHKLYQQIKAGAYD 224
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 36/201 (17%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNEFK-ALVYEF 642
NVAVK+ + KS+ E E ++ RH N++ I S + +R + + L+ +
Sbjct: 62 NVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIAS--DMTSRHSSTQLWLITHY 116
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLH-----HHCHTSIVHCDL 697
GSL ++L Q L+ + L I + +A+ L +LH +I H DL
Sbjct: 117 HEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDL 168
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTS---RVKGSIGYVAPEYGALGEV--- 751
K N+L+ + D GL+ ++H S +Q RV G+ Y+APE L E
Sbjct: 169 KSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRV-GTKRYMAPE--VLDETIQV 224
Query: 752 -----STHGDEYSFGILMLEM 767
D ++FG+++ E+
Sbjct: 225 DCFDSYKRVDIWAFGLVLWEV 245
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 680 VLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLH----------DNSPDQT 729
+LE L + I+H +LKP N+ +D +GDFGL++ +H N P +
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 730 S--TSRVKGSIGYVAPEY-GALGEVSTHGDEYSFGILMLE 766
TS + G+ YVA E G + D YS GI+ E
Sbjct: 185 DNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
++YLH++ ++H DLK N+ L+++M +GDFGL+ + D + G+ Y
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF---DGERKKDLCGTPNY 208
Query: 741 VAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+APE S D +S G ++ + GK P
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
L+ + G + I E L+ ++H N+VK+ I T+ LV+E + + L+
Sbjct: 36 LEKEDEGIPSTTIREISILKELKHSNIVKLY---DVIHTKKR--LVLVFEHL-DQDLKKL 89
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
L+ E L + S + + N + Y H ++H DLKP N+L++ E
Sbjct: 90 LDVCEG------GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELK 140
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY-GALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+R P + T V ++ Y AP+ + ST D +S G + EM G
Sbjct: 141 IADFGLARAF--GIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
L+ + G + I E L+ ++H N+VK+ I T+ LV+E + + L+
Sbjct: 36 LEKEDEGIPSTTIREISILKELKHSNIVKLY---DVIHTKKR--LVLVFEHL-DQDLKKL 89
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
L+ E L + S + + N + Y H ++H DLKP N+L++ E
Sbjct: 90 LDVCEG------GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELK 140
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY-GALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+R P + T V ++ Y AP+ + ST D +S G + EM G
Sbjct: 141 IADFGLARAF--GIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
L+ EF+ G L + + ++ + ++ +N M++ L+++H H SIVH D+
Sbjct: 125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ------ACEGLKHMHEH---SIVHLDI 175
Query: 698 KPSNVLLDNEMVAHVG--DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHG 755
KP N++ + + + V DFGL+ L+ + + +T+ + + APE V +
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAE----FAAPEIVDREPVGFYT 231
Query: 756 DEYSFGILMLEMFTGKRP 773
D ++ G+L + +G P
Sbjct: 232 DMWAIGVLGYVLLSGLSP 249
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 36/201 (17%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNEFK-ALVYEF 642
NVAVK+ + KS+ E E ++ RH N++ I S + +R + + L+ +
Sbjct: 33 NVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIAS--DMTSRHSSTQLWLITHY 87
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLH-----HHCHTSIVHCDL 697
GSL ++L Q L+ + L I + +A+ L +LH +I H DL
Sbjct: 88 HEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDL 139
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTS---RVKGSIGYVAPEYGALGEV--- 751
K N+L+ + D GL+ ++H S +Q RV G+ Y+APE L E
Sbjct: 140 KSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRV-GTKRYMAPE--VLDETIQV 195
Query: 752 -----STHGDEYSFGILMLEM 767
D ++FG+++ E+
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEV 216
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 36/170 (21%)
Query: 614 RHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSI 673
RHRN++ + S S++ +++EF+ + +N E N+R ++ + +
Sbjct: 59 RHRNILHLHESFESMEEL-----VMIFEFISGLDIFERINTSAFELNEREIVSYVHQ--- 110
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG--DFGLSRLLH--DN----- 724
V L++LH H +I H D++P N++ + + +FG +R L DN
Sbjct: 111 ---VCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164
Query: 725 -SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+P+ Y APE VST D +S G L+ + +G P
Sbjct: 165 TAPE------------YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 36/201 (17%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNEFK-ALVYEF 642
NVAVK+ + KS+ E E ++ RH N++ I S + +R + + L+ +
Sbjct: 33 NVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIAS--DMTSRHSSTQLWLITHY 87
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLH-----HHCHTSIVHCDL 697
GSL ++L Q L+ + L I + +A+ L +LH +I H DL
Sbjct: 88 HEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDL 139
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTS---RVKGSIGYVAPEYGALGEV--- 751
K N+L+ + D GL+ ++H S +Q RV G+ Y+APE L E
Sbjct: 140 KSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRV-GTKRYMAPE--VLDETIQV 195
Query: 752 -----STHGDEYSFGILMLEM 767
D ++FG+++ E+
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEV 216
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Query: 287 EIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSF 346
EIP++L I TE+ L+ N+I+ P A +L+++DLS+N +S P GL S
Sbjct: 25 EIPTNLPETI--TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
Query: 347 VLLDLSRNHLSG-PIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQ 405
L L N ++ P L G L +Q L L+ NK++ + L L+ DN Q
Sbjct: 83 NSLVLYGNKITELPKSLFEG-LFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141
Query: 406 GPIHSGFSSLKGLQDLDLSRNNF 428
FS L+ +Q + L++N F
Sbjct: 142 TIAKGTFSPLRAIQTMHLAQNPF 164
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 588 AVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
AVK+++ Q E E L + HRN++++I D LV+E M G
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRF-----YLVFEKMRGG 96
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
S+ + +++ R N ++ + DVA+ L++LH+ I H DLKP N+L ++
Sbjct: 97 SILSHIHK-------RRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEH 146
Query: 707 E---MVAHVGDFGLS---RLLHDNSPDQTSTSRVK-GSIGYVAPE-YGALGEVST----H 754
+ DF L +L D SP T GS Y+APE A E ++
Sbjct: 147 PNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKR 206
Query: 755 GDEYSFGILMLEMFTGKRP 773
D +S G+++ + +G P
Sbjct: 207 CDLWSLGVILYILLSGYPP 225
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Query: 287 EIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSF 346
EIP++L I TE+ L+ N+I+ P A +L+++DLS+N +S P GL S
Sbjct: 25 EIPTNLPETI--TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
Query: 347 VLLDLSRNHLSG-PIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQ 405
L L N ++ P L G L +Q L L+ NK++ + L L+ DN Q
Sbjct: 83 NSLVLYGNKITELPKSLFEG-LFSLQLLLLNANKINXLRVDAFQDLHNLNLLSLYDNKLQ 141
Query: 406 GPIHSGFSSLKGLQDLDLSRNNF 428
FS L+ +Q + L++N F
Sbjct: 142 TIAKGTFSPLRAIQTMHLAQNPF 164
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
L+ + G + I E L+ ++H N+VK+ I T+ LV+E + + L+
Sbjct: 36 LEKEDEGIPSTTIREISILKELKHSNIVKLY---DVIHTKKR--LVLVFEHL-DQDLKKL 89
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711
L+ E L + S + + N + Y H ++H DLKP N+L++ E
Sbjct: 90 LDVCEG------GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELK 140
Query: 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY-GALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+R P + T + ++ Y AP+ + ST D +S G + EM G
Sbjct: 141 IADFGLARAF--GIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 13/130 (10%)
Query: 677 VANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EMVAHVGDFGLSRLLHDNSPDQTSTSR 733
V +LE + + IVH DLKP N+L + + DFGLS+++ Q
Sbjct: 154 VKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE----HQVLMKT 209
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDD------MFEEGLSLHKY 787
V G+ GY APE D +S GI+ + G P D MF L+ Y
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY 269
Query: 788 AKMGLPDQVA 797
D+V+
Sbjct: 270 FISPWWDEVS 279
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 680 VLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS------RLLHDNSP------- 726
V++YLH ++H D+KPSN+LL+ E V DFGLS R + +N P
Sbjct: 121 VIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 727 -----DQTSTSRVKGSIGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
DQ + + Y APE T G D +S G ++ E+ GK
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 588 AVKVLDLQQRGASKSFIAECEA--LRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
A K+++ ++ A E EA R ++H N+V++ SI G+ + L+++ +
Sbjct: 51 AAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH---DSISEEGHHY--LIFDLVTG 105
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNVLL 704
G L + +E + Q L + HCH +VH DLKP N+LL
Sbjct: 106 GELFEDIVAREYYSEADASHCIQQILEAVL-----------HCHQMGVVHRDLKPENLLL 154
Query: 705 DNEM---VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
+++ + DFGL+ + +Q + G+ GY++PE D ++ G
Sbjct: 155 ASKLKGAAVKLADFGLAI---EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACG 211
Query: 762 ILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794
+++ + G P D E+ L++ K G D
Sbjct: 212 VILYILLVGYPPFWD--EDQHRLYQQIKAGAYD 242
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 686 HHCHT-SIVHCDLKPSNVLLD-NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAP 743
HCH+ +VH D+K N+L+D A + DFG LLHD +RV Y P
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRV-----YSPP 207
Query: 744 EYGALGEVSTH------GDEYSFGILMLEMFTGKRP 773
E+ +S H +S GIL+ +M G P
Sbjct: 208 EW-----ISRHQYHALPATVWSLGILLYDMVCGDIP 238
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 582 TEETNVAVKVLDLQQRGASKSFIAECEA--LRSIRHRNLVKIITSCSSIDTRGNEFKALV 639
T A K+++ ++ A E EA R ++H N+V++ S S F LV
Sbjct: 54 TPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-----EGFHYLV 108
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
++ + G L + +E + + +LE ++H IVH DLKP
Sbjct: 109 FDLVTGGELFEDIVARE----------YYSEADASHCIHQILESVNHIHQHDIVHRDLKP 158
Query: 700 SNVLLDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGD 756
N+LL ++ + DFGL+ + +Q + G+ GY++PE D
Sbjct: 159 ENLLLASKCKGAAVKLADFGLAIEVQG---EQQAWFGFAGTPGYLSPEVLRKDPYGKPVD 215
Query: 757 EYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794
++ G+++ + G P D E+ L++ K G D
Sbjct: 216 IWACGVILYILLVGYPPFWD--EDQHKLYQQIKAGAYD 251
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 31/202 (15%)
Query: 583 EETNV--AVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
+ET+V A KV+D + + ++ E + L S H N+VK++ + N L+
Sbjct: 32 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY----ENNLWILI- 86
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
EF G+++ + + E RP L Q + + L YLH + I+H DLK
Sbjct: 87 EFCAGGAVDAVMLELE-----RP-LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAG 137
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPEYGALGEVST---- 753
N+L + + DFG+S N+ +T R IG ++APE + E S
Sbjct: 138 NILFTLDGDIKLADFGVSA---KNT--RTXIQRRDSFIGTPYWMAPEV-VMCETSKDRPY 191
Query: 754 --HGDEYSFGILMLEMFTGKRP 773
D +S GI ++EM + P
Sbjct: 192 DYKADVWSLGITLIEMAEIEPP 213
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 40/200 (20%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K++ + I L+ F
Sbjct: 49 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKVVNHKNII--------GLLNVFT 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 94 PQKSLEEF--QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV----- 751
LKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVILGMG 201
Query: 752 -STHGDEYSFGILMLEMFTG 770
+ D +S G +M EM G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 5/225 (2%)
Query: 228 YLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGE 287
YL + N I +L++L ++ + NL+ + L L L LF N+++
Sbjct: 39 YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 98
Query: 288 IPSSLGNLIFLTEVDLQGNSIRGSIPS-ALGNCLQLQKLDLSDNNLSGTIPREVI-GLSS 345
+ L L E+ L+ N I SIPS A L++LDL + I GL +
Sbjct: 99 PTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVN 157
Query: 346 FVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQ 405
L+L +L IP + L +++L+LS N+L P S L L
Sbjct: 158 LRYLNLGMCNLKD-IP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVA 215
Query: 406 GPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFN 450
+ F LK L++L+LS NN L++++L+ N
Sbjct: 216 TIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 30/200 (15%)
Query: 588 AVKVLDLQQRGASKSFI-AECEALRSIR-HRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
AVK+++ +Q G S+S + E E L + ++N++++I DTR LV+E +
Sbjct: 42 AVKIIE-KQAGHSRSRVFREVETLYQCQGNKNILELIEFFED-DTRFY----LVFEKLQG 95
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705
GS+ + QK+ N+R +++ DVA L++LH I H DLKP N+L +
Sbjct: 96 GSILAHI-QKQKHFNEREASRVVR------DVAAALDFLHT---KGIAHRDLKPENILCE 145
Query: 706 N-EMVAHVG--DFGL-SRLLHDNSPDQTSTSRVK---GSIGYVAPE-YGALGEVSTHGDE 757
+ E V+ V DF L S + +NS +T + GS Y+APE + +T D+
Sbjct: 146 SPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDK 205
Query: 758 ----YSFGILMLEMFTGKRP 773
+S G+++ M +G P
Sbjct: 206 RCDLWSLGVVLYIMLSGYPP 225
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 268 VGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDL 327
+ YL L L L N+I+ P L NL +TE++L GN ++ SA+ ++ LDL
Sbjct: 65 IQYLNNLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDL 120
Query: 328 SDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTS 387
+ ++ P + GLS+ +L L N ++ PL L +Q L + N+++ P
Sbjct: 121 TSTQITDVTP--LAGLSNLQVLYLDLNQITNISPL--AGLTNLQYLSIGNNQVNDLTP-- 174
Query: 388 LASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPM 434
LA+ L L DN S +SL L ++ L N S P+
Sbjct: 175 LANLSKLTTLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVSPL 219
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 32/202 (15%)
Query: 583 EETNV--AVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
+ET+V A KV+D + + ++ E + L S H N+VK++ + N L+
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF----YYENNLWILI- 113
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
EF G+++ + + E RP L Q + + L YLH + I+H DLK
Sbjct: 114 EFCAGGAVDAVMLELE-----RP-LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAG 164
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPEYGALGEVST---- 753
N+L + + DFG+S + + + R IG ++APE + E S
Sbjct: 165 NILFTLDGDIKLADFGVS------AKNTRTIQRRDSFIGTPYWMAPEV-VMCETSKDRPY 217
Query: 754 --HGDEYSFGILMLEMFTGKRP 773
D +S GI ++EM + P
Sbjct: 218 DYKADVWSLGITLIEMAEIEPP 239
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 40/200 (20%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K++ + I L+ F
Sbjct: 49 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKVVNHKNII--------GLLNVFT 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 94 PQKSLEEF--QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV----- 751
LKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVILGMG 201
Query: 752 -STHGDEYSFGILMLEMFTG 770
+ D +S G +M EM G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 583 EETNV--AVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
+ET+V A KV+D + + ++ E + L S H N+VK++ + N L+
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF----YYENNLWILI- 113
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
EF G+++ + + E RP L Q + + L YLH + I+H DLK
Sbjct: 114 EFCAGGAVDAVMLELE-----RP-LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAG 164
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST------H 754
N+L + + DFG+S N+ G+ ++APE + E S
Sbjct: 165 NILFTLDGDIKLADFGVSA---KNTRXIQRRDXFIGTPYWMAPEV-VMCETSKDRPYDYK 220
Query: 755 GDEYSFGILMLEMFTGKRP 773
D +S GI ++EM + P
Sbjct: 221 ADVWSLGITLIEMAEIEPP 239
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697
LV EF GS+ + + + K N ++ IA +L L H ++H D+
Sbjct: 104 LVMEFCGAGSVTDLI--------KNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDI 155
Query: 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK--GSIGYVAPEYGALGE----- 750
K NVLL + DFG+S L D+T R G+ ++APE A E
Sbjct: 156 KGQNVLLTENAEVKLVDFGVSAQL-----DRTVGRRNTFIGTPYWMAPEVIACDENPDAT 210
Query: 751 VSTHGDEYSFGILMLEMFTGKRPTDDM 777
D +S GI +EM G P DM
Sbjct: 211 YDFKSDLWSLGITAIEMAEGAPPLCDM 237
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 120/286 (41%), Gaps = 34/286 (11%)
Query: 588 AVKVLDLQQRGASKSFIAECEA--LRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
A K+++ ++ A E EA R ++H N+V++ S F LV++ +
Sbjct: 58 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ESFHYLVFDLVTG 112
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-IVHCDLKPSNVLL 704
G L + +E + + +LE + + CH++ IVH +LKP N+LL
Sbjct: 113 GELFEDIVARE----------FYSEADASHCIQQILESIAY-CHSNGIVHRNLKPENLLL 161
Query: 705 DNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG 761
++ + DFGL+ ++D+ + G+ GY++PE S D ++ G
Sbjct: 162 ASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 217
Query: 762 ILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQP 821
+++ + G P D E+ L+ K G D + D E I + + + P
Sbjct: 218 VILYILLVGYPPFWD--EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT--VNP 273
Query: 822 NLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQ 867
R + L+V +C+ E + QD + L++ R+
Sbjct: 274 KKRITADQ----ALKVPWICNRERVASAIHRQDTVDCLKKFNARRK 315
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
Query: 588 AVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
AVKV+ ++Q+ +S + E + L+ + H N+ K+ + +G + LV E
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY---EFFEDKG--YFYLVGEVYT 109
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
G L DE R + + + I V + + Y H + IVH DLKP N+LL
Sbjct: 110 GGELF-------DEIISRKRFSEVDAARIIRQVLSGITYXHKN---KIVHRDLKPENLLL 159
Query: 705 DN---EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG---YVAPE--YGALGEVSTHGD 756
++ + + DFGLS ++ + K IG Y+APE +G E D
Sbjct: 160 ESKSKDANIRIIDFGLSTHFE-------ASKKXKDKIGTAYYIAPEVLHGTYDEKC---D 209
Query: 757 EYSFGILMLEMFTGKRP 773
+S G+++ + +G P
Sbjct: 210 VWSTGVILYILLSGCPP 226
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 583 EETNV--AVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640
+ET+V A KV+D + + ++ E + L S H N+VK++ + N L+
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF----YYENNLWILI- 113
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
EF G+++ + + E RP L Q + + L YLH + I+H DLK
Sbjct: 114 EFCAGGAVDAVMLELE-----RP-LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAG 164
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST------H 754
N+L + + DFG+S N+ G+ ++APE + E S
Sbjct: 165 NILFTLDGDIKLADFGVSA---KNTRXIQRRDSFIGTPYWMAPEV-VMCETSKDRPYDYK 220
Query: 755 GDEYSFGILMLEMFTGKRP 773
D +S GI ++EM + P
Sbjct: 221 ADVWSLGITLIEMAEIEPP 239
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 77/198 (38%), Gaps = 4/198 (2%)
Query: 263 SIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQL 322
++PT G Q + L GN+IS +S + LT + L N++ G +A L
Sbjct: 24 AVPT--GIPASSQRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLL 81
Query: 323 QKLDLSDN-NLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLS 381
++LDLSDN L P GL L L R L P L +Q L L +N L
Sbjct: 82 EQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ 141
Query: 382 GEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRF 441
+ L +L N F L L L L +N+ + P
Sbjct: 142 ALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGR 201
Query: 442 LQKLNLSFNNLEGEVPSE 459
L L L NNL +P+E
Sbjct: 202 LMTLYLFANNLS-MLPAE 218
Score = 35.0 bits (79), Expect = 0.17, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 77/207 (37%), Gaps = 27/207 (13%)
Query: 223 SSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGN 282
SS I+L+ NRIS + +NL ++ + N L G + L L+ L L N
Sbjct: 32 SSQRIFLH--GNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDN 89
Query: 283 -KISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSG------- 334
++ P++ L L + L ++ P LQ L L DNNL
Sbjct: 90 AQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFR 149
Query: 335 ----------------TIPREVI-GLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSE 377
++P GL S L L +NH++ P L + L L
Sbjct: 150 DLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFA 209
Query: 378 NKLSGEIPTSLASCVGLEYLNFSDNSF 404
N LS L L+YL +DN +
Sbjct: 210 NNLSMLPAEVLVPLRSLQYLRLNDNPW 236
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSR-LLHDNSPDQTSTSRVKGSIG 739
L+Y+H ++H DLKPSN+L++ +GDFG++R L + Q + +
Sbjct: 171 LKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 740 YVAPEYG-ALGEVSTHGDEYSFGILMLEMFTGKR 772
Y APE +L E + D +S G + EM ++
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSR-LLHDNSPDQTSTSRVKGSIG 739
L+Y+H ++H DLKPSN+L++ +GDFG++R L + Q + +
Sbjct: 172 LKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 740 YVAPEYG-ALGEVSTHGDEYSFGILMLEMFTGKR 772
Y APE +L E + D +S G + EM ++
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 34/200 (17%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNEFKALVY--- 640
VAVKV + S+ E E +++ RH N++ I + D +G +Y
Sbjct: 62 KVAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFIAA----DIKGTGSWTQLYLIT 114
Query: 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-----IVHC 695
++ NGSL ++L L+ L +A + L +LH ++ I H
Sbjct: 115 DYHENGSLYDYLKST--------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHR 166
Query: 696 DLKPSNVLLDNEMVAHVGDFGLS-RLLHD-NSPDQTSTSRVKGSIGYVAPEYGALGEVST 753
DLK N+L+ + D GL+ + + D N D +RV G+ Y+ PE
Sbjct: 167 DLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRN 225
Query: 754 H------GDEYSFGILMLEM 767
H D YSFG+++ E+
Sbjct: 226 HFQSYIMADMYSFGLILWEV 245
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 674 AIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSR 733
A + EYLH +++ DLKP N+L+D + V DFG ++ + + T
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWX 197
Query: 734 VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ +APE + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 25/191 (13%)
Query: 587 VAVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VA+KVL +++ G E E + H N++++ D R L+ E+
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYF--YDRRR---IYLILEYA 105
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCH-TSIVHCDLKPSNV 702
P G L L + QR +I ++A+ L Y CH ++H D+KP N+
Sbjct: 106 PRGELYKELQKSCTFDEQRTA-------TIMEELADALMY----CHGKKVIHRDIKPENL 154
Query: 703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGI 762
LL + + DFG S +H S + + G++ Y+ PE + D + G+
Sbjct: 155 LLGLKGELKIADFGWS--VHAPSLRRKTMC---GTLDYLPPEMIEGRMHNEKVDLWCIGV 209
Query: 763 LMLEMFTGKRP 773
L E+ G P
Sbjct: 210 LCYELLVGNPP 220
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 677 VANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG-----DFGLSRLLHDNSPDQTST 731
+ +LE +++ +IVH DLKP N+LL + + +G DFG+SR +
Sbjct: 137 IKQILEGVYYLHQNNIVHLDLKPQNILLSS--IYPLGDIKIVDFGMSRKI----GHACEL 190
Query: 732 SRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
+ G+ Y+APE ++T D ++ GI+ + T P
Sbjct: 191 REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E L +++H N+V+ S + G+ + +V ++ G L +N ++ Q ++
Sbjct: 73 EVAVLANMKHPNIVQYR---ESFEENGSLY--IVMDYCEGGDLFKRINAQKGVLFQEDQI 127
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNS 725
L + + L+++H I+H D+K N+ L + +GDFG++R+L NS
Sbjct: 128 -----LDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NS 177
Query: 726 PDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG 781
+ + + + G+ Y++PE + D ++ G ++ E+ T K FE G
Sbjct: 178 TVELARACI-GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH----AFEAG 228
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 52 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 106
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 107 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 157 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
Query: 771 KRP 773
P
Sbjct: 213 ASP 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 687 HCH-TSIVHCDLKPSNVLLDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVA 742
H H +VH DLKP N+L +E + + DFG +RL PD ++ Y A
Sbjct: 121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL---KPPDNQPLKTPCFTLHYAA 177
Query: 743 PEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
PE D +S G+++ M +G+ P
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 52 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 106
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 107 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 157 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
Query: 771 KRP 773
P
Sbjct: 213 ASP 215
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 586 NVAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNEFK-ALVYEF 642
+VAVK+ + +S+ E E ++ RH N++ I S + +R + + L+ +
Sbjct: 33 SVAVKIFSSRD---EQSWFRETEIYNTVLLRHDNILGFIAS--DMTSRNSSTQLWLITHY 87
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANV-LEYLHHHCHTSIVHCDLKPSN 701
+GSL ++L + Q P L L +S A +A++ +E +I H D K N
Sbjct: 88 HEHGSLYDFLQR----QTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRN 143
Query: 702 VLLDNEMVAHVGDFGLSRLLHDNSPDQT---STSRVKGSIGYVAPEY------GALGEVS 752
VL+ + + + D GL+ ++H D + RV G+ Y+APE E
Sbjct: 144 VLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRV-GTKRYMAPEVLDEQIRTDCFESY 201
Query: 753 THGDEYSFGILMLEM 767
D ++FG+++ E+
Sbjct: 202 KWTDIWAFGLVLWEI 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV-A 710
L Q EQ P+ + L A++ LEYLH I+H D+K NVLL ++ A
Sbjct: 153 LGQLVKEQGCLPEDRALYYLGQALEG---LEYLHSR---RILHGDVKADNVLLSSDGSHA 206
Query: 711 HVGDFGLSRLLHDN--SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMF 768
+ DFG + L + D + + G+ ++APE D +S +ML M
Sbjct: 207 ALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 266
Query: 769 TGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKE 818
G P F L L ++ P V EI A IQ G+ KE
Sbjct: 267 NGCHPWTQFFRGPLCLKIASE---PPPVREIPPSCAPLTAQAIQEGLRKE 313
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LILELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 80/196 (40%), Gaps = 37/196 (18%)
Query: 588 AVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGS 647
AVKV+D +R S+ E E L +R+ IIT D + + LV E M G
Sbjct: 56 AVKVIDKSKRDPSE----EIEIL--LRYGQHPNIITLKDVYDDGKHVY--LVTELMRGGE 107
Query: 648 L-ENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
L + L QK + + + + +EYLH +VH DLKPSN+L +
Sbjct: 108 LLDKILRQKFFSEREAS--------FVLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVD 156
Query: 707 EM----VAHVGDFGLSRLLHDN-----SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
E + DFG ++ L +P T+ +VAPE D
Sbjct: 157 ESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN--------FVAPEVLKRQGYDEGCDI 208
Query: 758 YSFGILMLEMFTGKRP 773
+S GIL+ M G P
Sbjct: 209 WSLGILLYTMLAGYTP 224
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 18/140 (12%)
Query: 638 LVYEFMPNGSLENWLNQKEDEQ-NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M G L + + ++ D+ +R +M+ D+ +++LH H +I H D
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMR------DIGTAIQFLHSH---NIAHRD 153
Query: 697 LKPSNVLL---DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST 753
+KP N+L + + V + DFG ++ N+ + YVAPE +
Sbjct: 154 VKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVAPEVLGPEKYDK 208
Query: 754 HGDEYSFGILMLEMFTGKRP 773
D +S G++M + G P
Sbjct: 209 SCDMWSLGVIMYILLCGFPP 228
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 34/197 (17%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K + + I L+ F
Sbjct: 49 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNHKNII--------GLLNVFT 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 94 PQKSLEEF--QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDN---SPDQTSTSRVKGSIGYVAPEYGALGEVST 753
LKPSN+++ ++ + DFGL+R + +P+ + Y APE
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-------YRAPEVILGMGYKE 204
Query: 754 HGDEYSFGILMLEMFTG 770
+ D +S G +M EM G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 268 VGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDL 327
V YL L L L N+I+ P L NL +TE++L GN ++ SA+ ++ LDL
Sbjct: 59 VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDL 114
Query: 328 SDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTS 387
+ ++ P + GLS+ +L L N ++ PL L +Q L + ++S P
Sbjct: 115 TSTQITDVTP--LAGLSNLQVLYLDLNQITNISPL--AGLTNLQYLSIGNAQVSDLTP-- 168
Query: 388 LASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPM 434
LA+ L L DN S +SL L ++ L N S P+
Sbjct: 169 LANLSKLTTLKADDNKISD--ISPLASLPNLIEVHLKNNQISDVSPL 213
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 80/196 (40%), Gaps = 37/196 (18%)
Query: 588 AVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGS 647
AVKV+D +R S+ E E L +R+ IIT D + + LV E M G
Sbjct: 56 AVKVIDKSKRDPSE----EIEIL--LRYGQHPNIITLKDVYDDGKHVY--LVTELMRGGE 107
Query: 648 LENWLNQKEDEQNQRPKLNLMQRLSIAID-VANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
L + + R K + S + + +EYLH +VH DLKPSN+L +
Sbjct: 108 LLDKI--------LRQKFFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVD 156
Query: 707 EM----VAHVGDFGLSRLLHDN-----SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
E + DFG ++ L +P T+ +VAPE D
Sbjct: 157 ESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN--------FVAPEVLKRQGYDEGCDI 208
Query: 758 YSFGILMLEMFTGKRP 773
+S GIL+ M G P
Sbjct: 209 WSLGILLYTMLAGYTP 224
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 32/196 (16%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K + + I L+ F
Sbjct: 51 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNHKNII--------GLLNVFT 95
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 96 PQKSLEEF--QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 153
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG--YVAPEYGALGEVSTH 754
LKPSN+++ ++ + DFGL+R TS V + Y APE +
Sbjct: 154 LKPSNIVVKSDCTLKILDFGLARTA------GTSFMMVPFVVTRYYRAPEVILGMGYKEN 207
Query: 755 GDEYSFGILMLEMFTG 770
D +S G +M EM G
Sbjct: 208 VDIWSVGCIMGEMIKG 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 588 AVKVLDLQQRGAS-----KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642
AVK++D+ + +S + E ++H ++V+++ + SS + +V+EF
Sbjct: 53 AVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS-----DGMLYMVFEF 107
Query: 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAID-VANVLEYLHHHCH-TSIVHCDLKPS 700
M L + ++ D + ++A + +LE L + CH +I+H D+KP
Sbjct: 108 MDGADLCFEIVKRADA-------GFVYSEAVASHYMRQILEALRY-CHDNNIIHRDVKPE 159
Query: 701 NVLL---DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
NVLL +N +GDFG++ L ++ + RV G+ ++APE D
Sbjct: 160 NVLLASKENSAPVKLGDFGVAIQLGESG--LVAGGRV-GTPHFMAPEVVKREPYGKPVDV 216
Query: 758 YSFGILMLEMFTGKRP---TDDMFEEGLSLHKYAKMGLPDQVAEIIDPA 803
+ G+++ + +G P T + EG+ KY KM P Q + I + A
Sbjct: 217 WGCGVILFILLSGCLPFYGTKERLFEGIIKGKY-KMN-PRQWSHISESA 263
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG- 739
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLXEXVAT 194
Query: 740 --YVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIG- 739
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 142 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLXEXVAT 195
Query: 740 --YVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 5/225 (2%)
Query: 228 YLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGE 287
YL + N I +L++L ++ + NL+ + L L L LF N+++
Sbjct: 39 YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 98
Query: 288 IPSSLGNLIFLTEVDLQGNSIRGSIPS-ALGNCLQLQKLDLSDNNLSGTIPREVI-GLSS 345
+ L L E+ L+ N I SIPS A L++LDL + I GL +
Sbjct: 99 PTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVN 157
Query: 346 FVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQ 405
L+L +L IP + L +++L+LS N+L P S L L
Sbjct: 158 LRYLNLGMCNLKD-IP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVA 215
Query: 406 GPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFN 450
+ F LK L++L+LS NN L++++L+ N
Sbjct: 216 TIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVA---DPDHDHTGFLTEYVAT 190
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 18/140 (12%)
Query: 638 LVYEFMPNGSLENWLNQKEDEQ-NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCD 696
++ E M G L + + ++ D+ +R +M+ D+ +++LH H +I H D
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMR------DIGTAIQFLHSH---NIAHRD 134
Query: 697 LKPSNVLL---DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST 753
+KP N+L + + V + DFG ++ N+ + YVAPE +
Sbjct: 135 VKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVAPEVLGPEKYDK 189
Query: 754 HGDEYSFGILMLEMFTGKRP 773
D +S G++M + G P
Sbjct: 190 SCDMWSLGVIMYILLCGFPP 209
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVA---DPDHDHTGFLTEYVAT 190
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 588 AVKVLDLQQRGASKSFIAECEA--LRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
A K+++ ++ A E EA R ++H N+V++ S F LV++ +
Sbjct: 35 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ESFHYLVFDLVTG 89
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRL-SIAIDVANVLEYLHHHCHTS-IVHCDLKPSNVL 703
G L + +E + Q L SIA +CH++ IVH +LKP N+L
Sbjct: 90 GELFEDIVAREFYSEADASHCIQQILESIA------------YCHSNGIVHRNLKPENLL 137
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
L ++ + DFGL+ ++D+ + G+ GY++PE S D ++
Sbjct: 138 LASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 193
Query: 761 GILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794
G+++ + G P D E+ L+ K G D
Sbjct: 194 GVILYILLVGYPPFWD--EDQHRLYAQIKAGAYD 225
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 588 AVKVLDLQQRGASKSFIAECEA--LRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
A K+++ ++ A E EA R ++H N+V++ S F LV++ +
Sbjct: 34 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ESFHYLVFDLVTG 88
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRL-SIAIDVANVLEYLHHHCHTS-IVHCDLKPSNVL 703
G L + +E + Q L SIA +CH++ IVH +LKP N+L
Sbjct: 89 GELFEDIVAREFYSEADASHCIQQILESIA------------YCHSNGIVHRNLKPENLL 136
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
L ++ + DFGL+ ++D+ + G+ GY++PE S D ++
Sbjct: 137 LASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 192
Query: 761 GILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794
G+++ + G P D E+ L+ K G D
Sbjct: 193 GVILYILLVGYPPFWD--EDQHRLYAQIKAGAYD 224
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 588 AVKVLDLQQRGASKSFIAECEA--LRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPN 645
A K+++ ++ A E EA R ++H N+V++ S F LV++ +
Sbjct: 35 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ESFHYLVFDLVTG 89
Query: 646 GSLENWLNQKEDEQNQRPKLNLMQRL-SIAIDVANVLEYLHHHCHTS-IVHCDLKPSNVL 703
G L + +E + Q L SIA +CH++ IVH +LKP N+L
Sbjct: 90 GELFEDIVAREFYSEADASHCIQQILESIA------------YCHSNGIVHRNLKPENLL 137
Query: 704 LDNE---MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSF 760
L ++ + DFGL+ ++D+ + G+ GY++PE S D ++
Sbjct: 138 LASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 193
Query: 761 GILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794
G+++ + G P D E+ L+ K G D
Sbjct: 194 GVILYILLVGYPPFWD--EDQHRLYAQIKAGAYD 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVA---DPDHDHTGFLTEYVAT 190
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 190
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVA---DPDHDHTGFLTEYVAT 194
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIV 693
EFK Y FM L L QK QN K + + L + I + +VLEY+H + V
Sbjct: 120 EFKGRSYRFMVMERLGIDL-QKISGQNGTFKKSTV--LQLGIRMLDVLEYIHEN---EYV 173
Query: 694 HCDLKPSNVLL--DNEMVAHVGDFGLS-RLLHDNSPDQTSTSRVKGSIGYVAPEYGALG- 749
H D+K +N+LL N ++ D+GLS R + + Q + KG G + E+ +L
Sbjct: 174 HGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTI--EFTSLDA 231
Query: 750 ----EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEII 800
+S D G ML GK P + ++ +++ AK L D++ + +
Sbjct: 232 HKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT-AKTNLLDELPQSV 285
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 194
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVA---DPDHDHTGFLTEYVAT 194
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 135 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 188
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 192
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMT--------GY 189
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 192
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 194
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 135 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 188
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMT--------GY 189
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMT--------GY 189
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 142 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 195
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 143 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 196
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 134 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 187
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 194
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 145 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 198
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 190
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 596 QRGASKSFIA-ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQ 654
+RG S+ I E L+ I+H N +IT + + + L+ E + G L ++L +
Sbjct: 53 RRGVSREDIEREVSILKEIQHPN---VITLHEVYENKTDVI--LIGELVAGGELFDFLAE 107
Query: 655 KEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---- 710
KE + L Q + N + YLH I H DLKP N++L + V
Sbjct: 108 KESLTEEEATEFLKQ-------ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ DFGL+ + + + G+ +VAPE + D +S G++ + +G
Sbjct: 158 KIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 771 KRP 773
P
Sbjct: 214 ASP 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMT--------GY 187
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 149 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMT--------GY 193
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMT--------GY 187
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 40/200 (20%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K + + I L+ F
Sbjct: 49 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNHKNII--------GLLNVFT 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 94 PQKSLEEF--QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV----- 751
LKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVILGMG 201
Query: 752 -STHGDEYSFGILMLEMFTG 770
+ D +S G +M EM G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSNV ++ + + DFGL+R D+ T GY
Sbjct: 136 LKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMT-------GY 180
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ GK
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 40/200 (20%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K + + I L+ F
Sbjct: 50 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNHKNII--------GLLNVFT 94
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 95 PQKSLEEF--QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 152
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV----- 751
LKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVILGMG 202
Query: 752 -STHGDEYSFGILMLEMFTG 770
+ D +S G +M EM G
Sbjct: 203 YKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 40/200 (20%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K + + I L+ F
Sbjct: 49 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNHKNII--------GLLNVFT 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 94 PQKSLEEF--QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV----- 751
LKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVILGMG 201
Query: 752 -STHGDEYSFGILMLEMFTG 770
+ D +S G +M EM G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 157 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVA---DPDHDHTGFLTEYVAT 210
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 157 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTEYVAT 210
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 40/200 (20%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K + + I L+ F
Sbjct: 49 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNHKNII--------GLLNVFT 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 94 PQKSLEEF--QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV----- 751
LKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVILGMG 201
Query: 752 -STHGDEYSFGILMLEMFTG 770
+ D +S G +M EM G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 187
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 137 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 181
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 189
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 178
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV-A 710
L Q EQ P+ + L A++ LEYLH I+H D+K NVLL ++ A
Sbjct: 172 LGQLVKEQGCLPEDRALYYLGQALEG---LEYLHSR---RILHGDVKADNVLLSSDGSHA 225
Query: 711 HVGDFGLSRLLHDNSPDQT--STSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMF 768
+ DFG + L + ++ + + G+ ++APE D +S +ML M
Sbjct: 226 ALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 285
Query: 769 TGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKE 818
G P F L L ++ P V EI A IQ G+ KE
Sbjct: 286 NGCHPWTQFFRGPLCLKIASE---PPPVREIPPSCAPLTAQAIQEGLRKE 332
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 135 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 179
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 136 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 180
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 187
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 194
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 149 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 193
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 194
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 194
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 40/158 (25%)
Query: 671 LSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD--NEMVAHVGDFGLS---------- 718
L +++ + ++LEY+H H VH D+K SN+LL+ N ++ D+GL+
Sbjct: 155 LQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHK 211
Query: 719 ------RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKR 772
+ HD + + TS G VAP S GD G M++ TG
Sbjct: 212 EYKEDPKRCHDGTIEFTSIDAHNG----VAP--------SRRGDLEILGYCMIQWLTGHL 259
Query: 773 PTDDMFEEGLSLHKY---AKMGLPDQVAEIIDPAILEE 807
P +E+ L KY +K+ + +A ++D E+
Sbjct: 260 P----WEDNLKDPKYVRDSKIRYRENIASLMDKCFPEK 293
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTST---SRVKGS 737
L+Y+H +++H DLKPSN+LL+ + DFGL+R+ PD T + +
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVA---DPDHDHTGFLTEYVAT 192
Query: 738 IGYVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 148 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 192
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 91/227 (40%), Gaps = 29/227 (12%)
Query: 586 NVAVKVLDLQQRGASKS--FIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
++ VKVL ++ KS F EC LR H N++ ++ +C S L+ +
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA---PHPTLITHWX 91
Query: 644 PNGSLENWLNQKED---EQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700
P GSL N L++ + +Q+Q K A+D A +L H I L
Sbjct: 92 PYGSLYNVLHEGTNFVVDQSQAVKF--------ALDXARGXAFL-HTLEPLIPRHALNSR 142
Query: 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH---GDE 757
+V +D + A + + SP + +VAPE T+ D
Sbjct: 143 SVXIDEDXTARISXADVK--FSFQSPGRXYAP------AWVAPEALQKKPEDTNRRSADX 194
Query: 758 YSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAI 804
+SF +L+ E+ T + P D+ + K A GL + I P +
Sbjct: 195 WSFAVLLWELVTREVPFADLSNXEIG-XKVALEGLRPTIPPGISPHV 240
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 184
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 184
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 135 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 179
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 40/200 (20%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K + + I L+ F
Sbjct: 49 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNHKNII--------GLLNVFT 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 94 PQKSLEEF--QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV----- 751
LKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVILGMG 201
Query: 752 -STHGDEYSFGILMLEMFTG 770
+ D +S G +M EM G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 178
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 188
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 40/158 (25%)
Query: 671 LSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD--NEMVAHVGDFGLS---------- 718
L +++ + ++LEY+H H VH D+K SN+LL+ N ++ D+GL+
Sbjct: 155 LQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHK 211
Query: 719 ------RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKR 772
+ HD + + TS G VAP S GD G M++ TG
Sbjct: 212 EYKEDPKRCHDGTIEFTSIDAHNG----VAP--------SRRGDLEILGYCMIQWLTGHL 259
Query: 773 PTDDMFEEGLSLHKY---AKMGLPDQVAEIIDPAILEE 807
P +E+ L KY +K+ + +A ++D E+
Sbjct: 260 P----WEDNLKDPKYVRDSKIRYRENIASLMDKCFPEK 293
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 178
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 184
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMT--------GY 184
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSNV ++ + + DFGL+R D+ T GY
Sbjct: 144 LKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMT-------GY 188
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ GK
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 586 NVAVKVLDLQQRGAS--KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
VA++++D+++ K+F E A R RH N+V + +C S A++
Sbjct: 57 EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-----PPHLAIITSLC 111
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703
+L + + ++ + L++ + IA ++ + YLH I+H DLK NV
Sbjct: 112 KGRTLYSVV------RDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVF 162
Query: 704 LDNEMVAHVGDFGL 717
DN V + DFGL
Sbjct: 163 YDNGKVV-ITDFGL 175
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 161 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 205
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 82/196 (41%), Gaps = 32/196 (16%)
Query: 585 TNVAVKVL--DLQQRGASKSFIAECEALRSIRHRN---LVKIITSCSSIDTRGNEFKALV 639
VA+K L Q +K E L+ +RH N L+ + T ++D + + LV
Sbjct: 51 AKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY--LV 108
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699
FM G+ L + E R + + Q L L Y+H I+H DLKP
Sbjct: 109 MPFM--GTDLGKLMKHEKLGEDRIQFLVYQML-------KGLRYIHA---AGIIHRDLKP 156
Query: 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSI---GYVAPEYGALGEVSTHG- 755
N+ ++ + + DFGL+R + S + G + Y APE T
Sbjct: 157 GNLAVNEDCELKILDFGLAR---------QADSEMXGXVVTRWYRAPEVILNWMRYTQTV 207
Query: 756 DEYSFGILMLEMFTGK 771
D +S G +M EM TGK
Sbjct: 208 DIWSVGCIMAEMITGK 223
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSNV ++ + + DFGL+R D+ T GY
Sbjct: 144 LKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMT-------GY 188
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ GK
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 157 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 201
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMT--------GY 188
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 158 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 202
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 32/196 (16%)
Query: 601 KSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQN 660
+ F+AE + H ++V+I D G+ +V E++ SL+ QK
Sbjct: 130 RQFLAE------VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK----- 178
Query: 661 QRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL 720
L + + ++ +++ L YLH +V+ DLKP N++L E + + +SR+
Sbjct: 179 ----LPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEEQLKLIDLGAVSRI 231
Query: 721 LHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFG----ILMLEMFT-GKRPTD 775
S + G+ G+ APE G + D Y+ G L L++ T R D
Sbjct: 232 --------NSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD 282
Query: 776 DMFEEGLSLHKYAKMG 791
+ E+ L Y G
Sbjct: 283 GLPEDDPVLKTYDSYG 298
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R D GY
Sbjct: 161 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------------MXGY 205
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 41/210 (19%)
Query: 588 AVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGS 647
AVK++D +R ++ E E L +R+ IIT D ++ +V E G
Sbjct: 51 AVKIIDKSKRDPTE----EIEIL--LRYGQHPNIITLKDVYDD--GKYVYVVTELXKGGE 102
Query: 648 L-ENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
L + L QK + + ++ + +EYLH +VH DLKPSN+L +
Sbjct: 103 LLDKILRQKFFSEREAS--------AVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVD 151
Query: 707 EM----VAHVGDFGLSRLLHDN-----SPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDE 757
E + DFG ++ L +P T+ +VAPE D
Sbjct: 152 ESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN--------FVAPEVLERQGYDAACDI 203
Query: 758 YSFGILMLEMFTGKRP----TDDMFEEGLS 783
+S G+L+ TG P DD EE L+
Sbjct: 204 WSLGVLLYTXLTGYTPFANGPDDTPEEILA 233
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 158 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 202
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 588 AVKVL---DLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMP 644
A+K++ D+ +RG F E + L + R + ++ + + LV E+
Sbjct: 90 AMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL-----HFAFQDENYLYLVMEYYV 144
Query: 645 NGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704
G L L++ + + + +AID + L Y VH D+KP N+LL
Sbjct: 145 GGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY---------VHRDIKPDNILL 195
Query: 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK-GSIGYVAPE-------YGALGEVSTHGD 756
D + DFG L D T S V G+ Y++PE G D
Sbjct: 196 DRCGHIRLADFGSCLKLR---ADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECD 252
Query: 757 EYSFGILMLEMFTGKRP--TDDMFEE-GLSLHKYAKMGLPDQVAEIIDPAILEEALEI 811
++ G+ EMF G+ P D E G +H + LP ++D + EEA +
Sbjct: 253 WWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLP-----LVDEGVPEEARDF 305
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 157 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 201
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVS 752
H D+KP N+L+ + A++ DFG++ D T G++ Y APE + +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEK--LTQLGNTVGTLYYXAPERFSESHAT 213
Query: 753 THGDEYSFGILMLEMFTGKRP 773
D Y+ ++ E TG P
Sbjct: 214 YRADIYALTCVLYECLTGSPP 234
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R D +T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR------WY 188
Query: 741 VAPEYGA-LGEVSTHGDEYSFGILMLEMFTGK 771
APE + D +S G +M E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 188
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R D GY
Sbjct: 167 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------------MTGY 211
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 36/196 (18%)
Query: 586 NVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALVYE 641
NVAVK L Q + +K E L+ + H+N++ ++ + T EF+ LV E
Sbjct: 51 NVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVME 109
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVH 694
M NL Q + + +D + L+ H H++ I+H
Sbjct: 110 LM--------------------DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH 754
DLKPSN+++ ++ + DFGL+R N T V Y APE + +
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTACTNF---MMTPYVVTRY-YRAPEVILGMGYAAN 205
Query: 755 GDEYSFGILMLEMFTG 770
D +S G +M E+ G
Sbjct: 206 VDIWSVGCIMGELVKG 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 23/177 (12%)
Query: 600 SKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQ 659
S + + E L+ + H N++K+ + + N + LV E G L DE
Sbjct: 65 SGALLDEVAVLKQLDHPNIMKLY---EFFEDKRNYY--LVMEVYRGGELF-------DEI 112
Query: 660 NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EMVAHVGDFG 716
R K + + I V + YLH H +IVH DLKP N+LL++ + + + DFG
Sbjct: 113 ILRQKFSEVDAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFG 169
Query: 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
LS + G+ Y+APE + D +S G+++ + G P
Sbjct: 170 LSAHFEVGGKMKERL----GTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R ++ D+ + GY
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMT--------GY 188
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 40/152 (26%)
Query: 671 LSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD--NEMVAHVGDFGLS---------- 718
L +++ + ++LEY+H H VH D+K SN+LL+ N ++ D+GL+
Sbjct: 155 LQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHK 211
Query: 719 ------RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKR 772
+ HD + + TS G VAP S GD G M++ TG
Sbjct: 212 AYAADPKRCHDGTIEFTSIDAHNG----VAP--------SRRGDLEILGYCMIQWLTGHL 259
Query: 773 PTDDMFEEGLSLHKY---AKMGLPDQVAEIID 801
P +E+ L KY +K+ + +A ++D
Sbjct: 260 P----WEDNLKDPKYVRDSKIRYRENIASLMD 287
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 25/193 (12%)
Query: 606 ECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKL 665
E R ++H N+V++ SI G+ + L+++ + G L + +E
Sbjct: 60 EARICRLLKHPNIVRLH---DSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASH 114
Query: 666 NLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNVLLDNEM---VAHVGDFGLSRLL 721
+ Q L + HCH +VH +LKP N+LL +++ + DFGL+
Sbjct: 115 CIQQILEAVL-----------HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI-- 161
Query: 722 HDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG 781
+ +Q + G+ GY++PE D ++ G+++ + G P D E+
Sbjct: 162 -EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD--EDQ 218
Query: 782 LSLHKYAKMGLPD 794
L++ K G D
Sbjct: 219 HRLYQQIKAGAYD 231
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL-EEFQDVYLV 107
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 108 MELM--------------------DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI 147
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSR 719
+H DLKPSN+++ ++ + DFGL+R
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 71/195 (36%), Gaps = 2/195 (1%)
Query: 268 VGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDL 327
VG Q + L GN+IS +S LT + L N + +A L++LDL
Sbjct: 28 VGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDL 87
Query: 328 SDN-NLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPT 386
SDN L P GL L L R L P L +Q L L +N L
Sbjct: 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD 147
Query: 387 SLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLN 446
+ L +L N F L L L L +N + P L L
Sbjct: 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207
Query: 447 LSFNNLEGEVPSEGV 461
L NNL +P+E +
Sbjct: 208 LFANNLSA-LPTEAL 221
Score = 34.3 bits (77), Expect = 0.30, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 72/183 (39%), Gaps = 5/183 (2%)
Query: 225 HLIYLYMSAN---RISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFG 281
+L L++ +N RI TG+ L+ L L + L P + L +L L L
Sbjct: 57 NLTILWLHSNVLARIDAAAFTGLALLEQLDL--SDNAQLRSVDPATFHGLGRLHTLHLDR 114
Query: 282 NKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVI 341
+ P L L + LQ N+++ + L L L N +S R
Sbjct: 115 CGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 174
Query: 342 GLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSD 401
GL S L L +N ++ P L + L L N LS +LA L+YL +D
Sbjct: 175 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 234
Query: 402 NSF 404
N +
Sbjct: 235 NPW 237
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 71/195 (36%), Gaps = 2/195 (1%)
Query: 268 VGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDL 327
VG Q + L GN+IS +S LT + L N + +A L++LDL
Sbjct: 27 VGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDL 86
Query: 328 SDN-NLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPT 386
SDN L P GL L L R L P L +Q L L +N L
Sbjct: 87 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD 146
Query: 387 SLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLN 446
+ L +L N F L L L L +N + P L L
Sbjct: 147 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 206
Query: 447 LSFNNLEGEVPSEGV 461
L NNL +P+E +
Sbjct: 207 LFANNLSA-LPTEAL 220
Score = 34.3 bits (77), Expect = 0.30, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 72/183 (39%), Gaps = 5/183 (2%)
Query: 225 HLIYLYMSAN---RISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFG 281
+L L++ +N RI TG+ L+ L L + L P + L +L L L
Sbjct: 56 NLTILWLHSNVLARIDAAAFTGLALLEQLDL--SDNAQLRSVDPATFHGLGRLHTLHLDR 113
Query: 282 NKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVI 341
+ P L L + LQ N+++ + L L L N +S R
Sbjct: 114 CGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 173
Query: 342 GLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSD 401
GL S L L +N ++ P L + L L N LS +LA L+YL +D
Sbjct: 174 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 233
Query: 402 NSF 404
N +
Sbjct: 234 NPW 236
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R D +T Y
Sbjct: 158 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR------WY 208
Query: 741 VAPEYGA-LGEVSTHGDEYSFGILMLEMFTGK 771
APE + D +S G +M E+ TG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + D+GL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 40/201 (19%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K + + I L+ F
Sbjct: 54 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNHKNII--------GLLNVFT 98
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 99 PQKSLEEF--QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 156
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV----- 751
LKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 157 LKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVILGMG 206
Query: 752 -STHGDEYSFGILMLEMFTGK 771
+ D +S G +M EM K
Sbjct: 207 YKENVDLWSVGCIMGEMVCHK 227
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 42 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 100
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 101 MELM--------------------DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI 140
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSR 719
+H DLKPSN+++ ++ + DFGL+R
Sbjct: 141 IHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 80/189 (42%), Gaps = 20/189 (10%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
+A K++ + + E + + H NL+++ + S N+ LV E++ G
Sbjct: 117 LAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES----KNDI-VLVMEYVDGG 171
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
L ++ DE NL + L + + + E + H I+H DLKP N+L N
Sbjct: 172 EL---FDRIIDES-----YNLTE-LDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN 222
Query: 707 EMVAHVG--DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM 764
+ DFGL+R + + G+ ++APE VS D +S G++
Sbjct: 223 RDAKQIKIIDFGLARRYKPREKLKVNF----GTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278
Query: 765 LEMFTGKRP 773
+ +G P
Sbjct: 279 YMLLSGLSP 287
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 40/201 (19%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K + + I L+ F
Sbjct: 43 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNHKNII--------GLLNVFT 87
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 88 PQKSLEEF--QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 145
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV----- 751
LKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 146 LKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVILGMG 195
Query: 752 -STHGDEYSFGILMLEMFTGK 771
+ D +S G +M EM K
Sbjct: 196 YKENVDLWSVGCIMGEMVCHK 216
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 606 ECEALR-SIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPK 664
E + LR S H N+++ C+ D +F+ + E +L+ ++ QK+
Sbjct: 67 EVQLLRESDEHPNVIRYF--CTEKD---RQFQYIAIELC-AATLQEYVEQKDFAHLGLEP 120
Query: 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD-----NEMVAHVGDFGLSR 719
+ L+Q+ + L +LH +IVH DLKP N+L+ ++ A + DFGL +
Sbjct: 121 ITLLQQTTSG------LAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
Query: 720 LLHDNSPDQTSTSRVKGSIGYVAPE 744
L + S V G+ G++APE
Sbjct: 172 KLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 36/196 (18%)
Query: 586 NVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALVYE 641
NVAVK L Q + +K E L+ + H+N++ ++ + T EF+ LV E
Sbjct: 49 NVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL-EEFQDVYLVME 107
Query: 642 FMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVH 694
M NL Q + + +D + L+ H H++ I+H
Sbjct: 108 LM--------------------DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIH 147
Query: 695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH 754
DLKPSN+++ ++ + DFGL+R N T V Y APE +
Sbjct: 148 RDLKPSNIVVKSDCTLKILDFGLARTASTNF---MMTPYVVTRY-YRAPEVILGMGYKEN 203
Query: 755 GDEYSFGILMLEMFTG 770
D +S G +M E+ G
Sbjct: 204 VDIWSVGCIMGELVKG 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL-EEFQDVYLV 107
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 108 MELM--------------------DANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSR 719
+H DLKPSN+++ ++ + DFGL+R
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 107
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 108 MELM--------------------DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI 147
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSR 719
+H DLKPSN+++ ++ + DFGL+R
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R D +T Y
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR------WY 184
Query: 741 VAPEYGA-LGEVSTHGDEYSFGILMLEMFTGK 771
APE + D +S G +M E+ TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Query: 299 TEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIG-LSSFVLLDLSRNHLS 357
T VD G ++ IP + L +L L+DN L + G L V L+L RN L+
Sbjct: 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67
Query: 358 GPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKG 417
G P IQ+L L ENK+ L+ LN DN + F L
Sbjct: 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS 127
Query: 418 LQDLDLSRNNFS 429
L L+L+ N F+
Sbjct: 128 LTSLNLASNPFN 139
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 47/115 (40%)
Query: 365 GRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLS 424
GRL + +L+L N+L+G P + ++ L +N + + F L L+ L+L
Sbjct: 51 GRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLY 110
Query: 425 RNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGG 479
N S +P L LNL+ N + +R S+ G CG
Sbjct: 111 DNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGA 165
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%)
Query: 292 LGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDL 351
G L L +++L+ N + G P+A +Q+L L +N + + +GL L+L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 352 SRNHLSGPIPLEVGRLKGIQQLDLSEN 378
N +S +P L + L+L+ N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 225 HLIYLYMSANRISGTIPT---GVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFG 281
HL+ L + N+++G P G +++ L L ++ ++ + L +L+ L+L+
Sbjct: 55 HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLG---LHQLKTLNLYD 111
Query: 282 NKISGEIPSSLGNLIFLTEVDLQGN 306
N+IS +P S +L LT ++L N
Sbjct: 112 NQISCVMPGSFEHLNSLTSLNLASN 136
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 225 HLIYLYMSANRISGTIPTGV-GNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNK 283
H L ++ N + G+ G L +L+ + ++ N LTG P + +Q L L NK
Sbjct: 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89
Query: 284 ISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGL 343
I + N +FL QL+ L+L DN +S +P L
Sbjct: 90 I-----KEISNKMFL-------------------GLHQLKTLNLYDNQISCVMPGSFEHL 125
Query: 344 SSFVLLDLSRN 354
+S L+L+ N
Sbjct: 126 NSLTSLNLASN 136
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R D +T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR------WY 188
Query: 741 VAPEYGA-LGEVSTHGDEYSFGILMLEMFTGK 771
APE + D +S G +M E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DFGL+R D +T Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR------WY 188
Query: 741 VAPEYGA-LGEVSTHGDEYSFGILMLEMFTGK 771
APE + D +S G +M E+ TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 24/143 (16%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K + + I L+ F
Sbjct: 49 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNHKNII--------GLLNVFT 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 94 PQKSLEEF--QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 697 LKPSNVLLDNEMVAHVGDFGLSR 719
LKPSN+++ ++ + DFGL+R
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 34/198 (17%)
Query: 584 ETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFM 643
E NVA+K L S+ F + A R+ R L+K + + I L+ F
Sbjct: 49 ERNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNHKNII--------GLLNVFT 93
Query: 644 PNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-IVHCD 696
P SLE + Q + NL Q + + +D + L+ H H++ I+H D
Sbjct: 94 PQKSLEEF--QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDN---SPDQTSTSRVKGSIGYVAPEYGALGEVST 753
LKPSN+++ ++ + DFGL+R + P+ + Y APE
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-------YRAPEVILGMGYKE 204
Query: 754 HGDEYSFGILMLEMFTGK 771
+ D +S G +M EM K
Sbjct: 205 NVDIWSVGCIMGEMVCHK 222
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 258 NLLTGSIPTSVGYLLKLQVLSLFGNKIS--GEIPSSLGNLIFLTEVDLQGNSIRGSIPSA 315
NLLT ++ + G+L +L+ L L N++ +I + L ++D+ NS+ S
Sbjct: 334 NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSV--SYDEK 391
Query: 316 LGNC---LQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQ 372
G+C L L++S N L+ TI R + +LDL N + IP +V +L+ +Q+
Sbjct: 392 KGDCSWTKSLLSLNMSSNILTDTIFRCLPP--RIKVLDLHSNKIKS-IPKQVVKLEALQE 448
Query: 373 LDLSENKLSG 382
L+++ N+L
Sbjct: 449 LNVASNQLKS 458
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 325 LDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLS--GPIPLEVGRLKGIQQLDLSENKLS- 381
LD S+N L+ T+ L+ L L N L I ++K +QQLD+S+N +S
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 382 GEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSL-KGLQDLDLSRNNFSGKIPMFLNTFR 440
E + L LN S N I F L ++ LDL N IP +
Sbjct: 389 DEKKGDCSWTKSLLSLNMSSNILTDTI---FRCLPPRIKVLDLHSNKIKS-IPKQVVKLE 444
Query: 441 FLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIG 472
LQ+LN++ N L+ VP +G+F + ++ I
Sbjct: 445 ALQELNVASNQLKS-VP-DGIFDRLTSLQKIW 474
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 248 KNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNS 307
K+L+ + M N+LT +I + +++VL L NKI IP + L L E+++ N
Sbjct: 399 KSLLSLNMSSNILTDTIFRCLPP--RIKVLDLHSNKIKS-IPKQVVKLEALQELNVASNQ 455
Query: 308 IRGSIPSALGNCL-QLQKLDLSDNNLSGTIPR 338
++ S+P + + L LQK+ L N + PR
Sbjct: 456 LK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTS-TSRVKGSIG 739
L+Y+H +++H DLKPSN+L++ + DFGL+R+ D D T + +
Sbjct: 157 LKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIA-DPEHDHTGFLTEXVATRW 212
Query: 740 YVAPEYGALGEVSTHG-DEYSFGILMLEMFTGK 771
Y APE + T D +S G ++ EM + +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 592 LDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENW 651
LD G S + E L+ ++H+N+V++ S ++ LV+EF + L+ +
Sbjct: 37 LDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-----DKKLTLVFEFC-DQDLKKY 90
Query: 652 LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHT-SIVHCDLKPSNVLLDNEMVA 710
+ + + + + +L + CH+ +++H DLKP N+L++
Sbjct: 91 FDSCNGDLDPEIVKSFLFQLLKGLGF----------CHSRNVLHRDLKPQNLLINRNGEL 140
Query: 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE--YGALGEVSTHGDEYSFGILMLEMF 768
+ DFGL+R P + ++ V ++ Y P+ +GA ST D +S G + E+
Sbjct: 141 KLADFGLARAF--GIPVRCYSAEV-VTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELA 196
Query: 769 TGKRP 773
RP
Sbjct: 197 NAARP 201
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 23/177 (12%)
Query: 600 SKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQ 659
S + + E L+ + H N++K+ + + N + LV E G L DE
Sbjct: 48 SGALLDEVAVLKQLDHPNIMKLY---EFFEDKRNYY--LVMEVYRGGELF-------DEI 95
Query: 660 NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EMVAHVGDFG 716
R K + + I V + YLH H +IVH DLKP N+LL++ + + + DFG
Sbjct: 96 ILRQKFSEVDAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFG 152
Query: 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRP 773
LS + G+ Y+APE + D +S G+++ + G P
Sbjct: 153 LSAHFEVGGKMKERL----GTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 351 LSRNHLSG----PIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDN 402
L+R +L+G +P E+ L ++ LDLS N+L+ +P L SC L+Y F DN
Sbjct: 249 LTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDN 303
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 274 LQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLS 333
L L L GN ++ E+P+ + NL L +DL N + S+P+ LG+C QL+ DN ++
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQLKYFYFFDNMVT 306
Query: 334 GTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLK 368
T+P E L + L + N PLE LK
Sbjct: 307 -TLPWEFGNLCNLQFLGVEGN------PLEKQFLK 334
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 5 EIPANITHCSELRILDLVVNKLEGNIPSELGNLFKL 40
E+PA I + S LR+LDL N+L ++P+ELG+ F+L
Sbjct: 261 ELPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQL 295
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 42/204 (20%)
Query: 587 VAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA----LV 639
VA+K + + +++ + I E L+ +RH N +I RG + LV
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN---------TIQYRGCYLREHTAWLV 132
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLE---YLHHHCHTSIVHCD 696
E+ GS + L E +++P +Q + IA L+ YLH H +++H D
Sbjct: 133 MEYC-LGSASDLL-----EVHKKP----LQEVEIAAVTHGALQGLAYLHSH---NMIHRD 179
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYG-ALGEVSTHG 755
+K N+LL + +GDFG + ++ + G+ ++APE A+ E G
Sbjct: 180 VKAGNILLSEPGLVKLGDFGSASIM-------APANXFVGTPYWMAPEVILAMDEGQYDG 232
Query: 756 --DEYSFGILMLEMFTGKRPTDDM 777
D +S GI +E+ K P +M
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNM 256
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL-EEFQDVYLV 107
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 108 MELM--------------------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSR 719
+H DLKPSN+++ ++ + DFGL+R
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 301 VDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPI 360
+DL N I+ + L++L+L++N +S P L + L L N L I
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL-I 95
Query: 361 PLEVGR-LKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQ 419
PL V L + +LD+SENK+ + L+ L DN H FS L L+
Sbjct: 96 PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155
Query: 420 DLDLSRNNFSGKIP 433
L L + N + IP
Sbjct: 156 QLTLEKCNLTS-IP 168
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 90/223 (40%), Gaps = 2/223 (0%)
Query: 229 LYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEI 288
L + NRI + +L + + N+++ P + L L+ L L N++
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 96
Query: 289 PSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVL 348
L LT++D+ N I + + L+ L++ DN+L R GL+S
Sbjct: 97 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 156
Query: 349 LDLSRNHLSGPIPLE-VGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGP 407
L L + +L+ IP E + L G+ L L ++ S L+ L S +
Sbjct: 157 LTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDT 215
Query: 408 IHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFN 450
+ L L ++ N + + + +L+ LNLS+N
Sbjct: 216 MTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYN 258
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 104/267 (38%), Gaps = 30/267 (11%)
Query: 225 HLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGY-LLKLQVLSLFGNK 283
HL L ++ N +S P NL NL + + N L IP V L L L + NK
Sbjct: 57 HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENK 115
Query: 284 ISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIG- 342
I + +L L +++ N + A L++L L NL+ +IP E +
Sbjct: 116 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT-SIPTEALSH 174
Query: 343 LSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSE---------NKLSGEIPTSLA--SC 391
L ++L L +++ RL ++ L++S N L G TSL+ C
Sbjct: 175 LHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC 234
Query: 392 -------------VGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNT 438
V L +LN S N S L LQ++ L + P
Sbjct: 235 NLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRG 294
Query: 439 FRFLQKLNLSFNNLEGEVPSEGVFKNV 465
+L+ LN+S N L E VF +V
Sbjct: 295 LNYLRVLNVSGNQL--TTLEESVFHSV 319
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 22/192 (11%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
A KV++ + + +I E E L + H +VK++ + G + ++ EF P G
Sbjct: 39 AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH---DGKLW--IMIEFCPGG 93
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+++ + + D P++ ++ R + L +LH I+H DLK NVL+
Sbjct: 94 AVDA-IMLELDRGLTEPQIQVVCR-----QMLEALNFLHS---KRIIHRDLKAGNVLMTL 144
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST-----HGDEYSFG 761
E + DFG+S N G+ ++APE + D +S G
Sbjct: 145 EGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 201
Query: 762 ILMLEMFTGKRP 773
I ++EM + P
Sbjct: 202 ITLIEMAQIEPP 213
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H +VH DLKP N+ ++ + + DFGL+R D T V + Y
Sbjct: 139 LKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYV-VTRWY 189
Query: 741 VAPEYG-ALGEVSTHGDEYSFGILMLEMFTGK 771
APE + + D +S G +M EM TGK
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 48/205 (23%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 43 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 101
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 102 MELM--------------------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 141
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV- 751
+H DLKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVI 191
Query: 752 -----STHGDEYSFGILMLEMFTGK 771
+ D +S G +M EM K
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 600 SKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQ 659
K + E L+ ++H NLV ++ R LV+E+ + L E ++
Sbjct: 46 KKIALREIRMLKQLKHPNLVNLLEV-----FRRKRRLHLVFEYCDHTVLH------ELDR 94
Query: 660 NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSR 719
QR + + SI + + H H + +H D+KP N+L+ V + DFG +R
Sbjct: 95 YQRGVPEHLVK-SITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFAR 150
Query: 720 LL---HDNSPDQTSTSRVKGSIGYVAPE-------YGALGEVSTHGDEYSFGILMLEMFT 769
LL D D+ +T Y +PE YG +V G ++ + + ++
Sbjct: 151 LLTGPSDYYDDEVATR------WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWP 204
Query: 770 GKRPTDDMF 778
GK D ++
Sbjct: 205 GKSDVDQLY 213
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 687 HCHTS-IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEY 745
H H+ +VH D+KP+N+ L +GDFGL L + +G Y+APE
Sbjct: 172 HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ----EGDPRYMAPEL 227
Query: 746 GALGEVSTHGDEYSFGILMLEM 767
G T D +S G+ +LE+
Sbjct: 228 -LQGSYGTAADVFSLGLTILEV 248
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 48/205 (23%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 43 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 101
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 102 MELM--------------------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 141
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV- 751
+H DLKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVI 191
Query: 752 -----STHGDEYSFGILMLEMFTGK 771
+ D +S G +M EM K
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 48/205 (23%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 42 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 100
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 101 MELM--------------------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 140
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV- 751
+H DLKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 141 IHRDLKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVI 190
Query: 752 -----STHGDEYSFGILMLEMFTGK 771
+ D +S G +M EM K
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 268 VGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDL 327
+ YL L+ L+L GN+I+ P L NL+ LT + + N I SAL N L++L L
Sbjct: 62 IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYL 117
Query: 328 SDNNLSGTIPREVIGLSSFVLLDLSRNH-LSGPIPLEVGRLKGIQQLDLSENKLSGEIP 385
+++N+S P + L+ L+L NH LS PL G+ L ++E+K+ P
Sbjct: 118 NEDNISDISP--LANLTKXYSLNLGANHNLSDLSPL--SNXTGLNYLTVTESKVKDVTP 172
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 219 IANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLS 278
IAN + L L ++ N+I P + +L +L VN +T P V +L L
Sbjct: 173 IANLT-DLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSLK 227
Query: 279 LFGNKISGEIPSSLGNLIFLTEVDLQGNSIRG--------------------SIPSALGN 318
+ NKI+ P L NL LT +++ N I S S L N
Sbjct: 228 IGNNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKXLNVGSNQISDISVLNN 285
Query: 319 CLQLQKLDLSDNNLSGTIPREVIG-LSSFVLLDLSRNHLSGPIPL 362
QL L L++N L G EVIG L++ L LS+NH++ PL
Sbjct: 286 LSQLNSLFLNNNQL-GNEDXEVIGGLTNLTTLFLSQNHITDIRPL 329
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 50 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 108
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 109 MELM--------------------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 148
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSR 719
+H DLKPSN+++ ++ + DFGL+R
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H +VH DLKP N+ ++ + + DFGL+R D T V + Y
Sbjct: 157 LKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYV-VTRWY 207
Query: 741 VAPEYG-ALGEVSTHGDEYSFGILMLEMFTGK 771
APE + + D +S G +M EM TGK
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 48/205 (23%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 48 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 106
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 107 MELM--------------------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 146
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV- 751
+H DLKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 147 IHRDLKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVI 196
Query: 752 -----STHGDEYSFGILMLEMFTGK 771
+ D +S G +M EM K
Sbjct: 197 LGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 42/204 (20%)
Query: 587 VAVKVLDLQQRGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA----LV 639
VA+K + + +++ + I E L+ +RH N +I RG + LV
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN---------TIQYRGCYLREHTAWLV 93
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLE---YLHHHCHTSIVHCD 696
E+ GS + L E +++P +Q + IA L+ YLH H +++H D
Sbjct: 94 MEYC-LGSASDLL-----EVHKKP----LQEVEIAAVTHGALQGLAYLHSH---NMIHRD 140
Query: 697 LKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYG-ALGEVSTHG 755
+K N+LL + +GDFG + ++ + G+ ++APE A+ E G
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIM-------APANXFVGTPYWMAPEVILAMDEGQYDG 193
Query: 756 --DEYSFGILMLEMFTGKRPTDDM 777
D +S GI +E+ K P +M
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNM 217
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 274 LQVLSLFGNKISGEIPSSLGNLIF--LTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNN 331
+Q LSL N++ S+ L + LT++DL N++ + L+ L L NN
Sbjct: 224 IQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNN 283
Query: 332 LSGTIPREVIGLSSFVLLDLSRNHLSGPIPL---------EVGRLKGIQQLDLSENKLSG 382
+ PR GLS+ L L R + L LK ++ L++ +N +
Sbjct: 284 IQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPS 343
Query: 383 EIPTSLASCVGLEYLNFSD--NSFQGPIHSGFSSL--KGLQDLDLSRNNFS 429
+ V L+YL+ S S Q + F SL L L+L++N+ S
Sbjct: 344 TKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHIS 394
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 43/106 (40%)
Query: 325 LDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEI 384
L+L+ N L P S +LD N +S P L ++ L+L N+LS
Sbjct: 30 LNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQIS 89
Query: 385 PTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSG 430
+ C L L+ NS + F + K L LDLS N S
Sbjct: 90 DQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSS 135
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 107
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 108 MELM--------------------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSR 719
+H DLKPSN+++ ++ + DFGL+R
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 33/196 (16%)
Query: 224 SHLIYLYMSANRISGTIPTGV----GNLKNLILIAMEVNLLTGSIPTSV-GYLLKLQVLS 278
++L YL ++ N++ ++P GV NLK L+L+ ++ S+P V L L L
Sbjct: 85 TNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ----SLPDGVFDKLTNLTYLY 139
Query: 279 LFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCL-QLQKLDLSDNNLSGTIP 337
L+ N++ L LT +DL N ++ S+P + + L QL++L L+DN L ++P
Sbjct: 140 LYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQLK-SVP 197
Query: 338 REVIG-LSSFVLLDLSRN----------HLSGPIPLEVGRLKGIQQLDLSENKLSG---- 382
V L+S + L N +LS I G + G LD + SG
Sbjct: 198 DGVFDRLTSLTHIWLLNNPWDCACSDILYLSRWISQHPGLVFGYLNLDPDSARCSGTNTP 257
Query: 383 -----EIPTSLASCVG 393
E TS + C G
Sbjct: 258 VRAVTEASTSPSKCPG 273
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 48/205 (23%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 107
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 108 MELM--------------------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV- 751
+H DLKPSN+++ ++ + DFGL+R TS + YV Y EV
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTP--YVVTRYYRAPEVI 197
Query: 752 -----STHGDEYSFGILMLEMFTGK 771
+ D +S G +M EM K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 50 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 108
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 109 MELM--------------------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 148
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSR 719
+H DLKPSN+++ ++ + DFGL+R
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 87 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 145
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 146 MELM--------------------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 185
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSR 719
+H DLKPSN+++ ++ + DFGL+R
Sbjct: 186 IHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 262 GSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQ 321
S+PT G QVL L+ N+I+ P L LT +DL N + Q
Sbjct: 22 ASVPT--GIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 79
Query: 322 LQKLDLSDNNLSGTIPR 338
L +L L+DN L +IPR
Sbjct: 80 LTQLSLNDNQLK-SIPR 95
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 584 ETNVAVKVLD--LQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK--ALV 639
+ NVA+K L Q + +K E ++ + H+N++ ++ + T EF+ LV
Sbjct: 87 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQDVYLV 145
Query: 640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH------HCHTS-I 692
E M NL Q + + +D + L+ H H++ I
Sbjct: 146 MELM--------------------DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 185
Query: 693 VHCDLKPSNVLLDNEMVAHVGDFGLSR 719
+H DLKPSN+++ ++ + DFGL+R
Sbjct: 186 IHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 300 EVDLQGNSIRGSIPS-ALGNCLQLQKLDLSDNNLSGTIPREVIG-LSSFVLLDLSRNHLS 357
++DLQ N + S+PS A +L+ L L+DN L T+P + L + L ++ N L
Sbjct: 41 KLDLQSNKL-SSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ 98
Query: 358 GPIPLEV-GRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLK 416
+P+ V +L + +L L N+L P S L YL+ N Q F L
Sbjct: 99 A-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157
Query: 417 GLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSII 471
L++L L N + L+ L L N L+ VP EG F ++ + ++
Sbjct: 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVP-EGAFDSLEKLKML 210
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 31/117 (26%)
Query: 692 IVHCDLKPSNVLLDNEMVAH-VGDFGLSRLLHD----------NSPDQTSTSRVKGSI-- 738
IVH D+KPSN L + + + + DFGL++ HD + Q S+ K SI
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 739 ---GYVAPEYGALG----EV-------STHGDEYSFGILMLEMFTGKRP----TDDM 777
VAP G G EV +T D +S G++ L + +G+ P +DD+
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDL 254
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%)
Query: 365 GRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLS 424
G + ++ LDLS N+++ + L CV L+ L + N FSSL L+ LDLS
Sbjct: 23 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 82
Query: 425 RNNFSGKIPMFLNTFRFLQKLNL 447
N S + L LNL
Sbjct: 83 YNYLSNLSSSWFKPLSSLTFLNL 105
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 4/155 (2%)
Query: 288 IPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFV 347
IPS L + +DL N I S L C+ LQ L L+ N ++ L S
Sbjct: 20 IPSGLTEAV--KSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 77
Query: 348 LLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLAS-CVGLEYLNFSD-NSFQ 405
LDLS N+LS L + L+L N TSL S L+ L + ++F
Sbjct: 78 HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT 137
Query: 406 GPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFR 440
F+ L L++L++ ++ P L + +
Sbjct: 138 KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQ 172
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 672 SIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA--HVGDFGLSRLLHDNSPDQT 729
A + L+ LH I+HCDLKP N+LL + + V DFG S H Q
Sbjct: 204 KFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH-----QR 255
Query: 730 STSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ ++ Y APE D +S G ++ E+ TG
Sbjct: 256 VYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 22/192 (11%)
Query: 587 VAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNG 646
A KV++ + + +I E E L + H +VK++ + G + ++ EF P G
Sbjct: 47 AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH---DGKLW--IMIEFCPGG 101
Query: 647 SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706
+++ + + D P++ ++ R + L +LH I+H DLK NVL+
Sbjct: 102 AVDA-IMLELDRGLTEPQIQVVCR-----QMLEALNFLHS---KRIIHRDLKAGNVLMTL 152
Query: 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST-----HGDEYSFG 761
E + DFG+S N G+ ++APE + D +S G
Sbjct: 153 EGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 209
Query: 762 ILMLEMFTGKRP 773
I ++EM + P
Sbjct: 210 ITLIEMAQIEPP 221
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 25/129 (19%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLL------DNEMVAHVGDFGLSRLLHDNSPDQTSTSRV 734
L+Y+H C I+H D+KP NVL+ +N + + D G + ++ + T
Sbjct: 144 LDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE- 200
Query: 735 KGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFE--EGLSLHKYAKMGL 792
Y +PE D +S L+ E+ TG D +FE EG H Y K
Sbjct: 201 -----YRSPEVLLGAPWGCGADIWSTACLIFELITG----DFLFEPDEG---HSYTKDD- 247
Query: 793 PDQVAEIID 801
D +A+II+
Sbjct: 248 -DHIAQIIE 255
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 672 SIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA--HVGDFGLSRLLHDNSPDQT 729
A + L+ LH I+HCDLKP N+LL + + V DFG S H Q
Sbjct: 204 KFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH-----QR 255
Query: 730 STSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
+ ++ Y APE D +S G ++ E+ TG
Sbjct: 256 VYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 25/129 (19%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLL------DNEMVAHVGDFGLSRLLHDNSPDQTSTSRV 734
L+Y+H C I+H D+KP NVL+ +N + + D G + ++ + T
Sbjct: 144 LDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE- 200
Query: 735 KGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFE--EGLSLHKYAKMGL 792
Y +PE D +S L+ E+ TG D +FE EG H Y K
Sbjct: 201 -----YRSPEVLLGAPWGCGADIWSTACLIFELITG----DFLFEPDEG---HSYTKDD- 247
Query: 793 PDQVAEIID 801
D +A+II+
Sbjct: 248 -DHIAQIIE 255
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NVL+D+E + D+GL+ H P Q RV S + PE
Sbjct: 146 YCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 201
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%)
Query: 365 GRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLS 424
G + ++ LDLS N+++ + L CV L+ L + N FSSL L+ LDLS
Sbjct: 49 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108
Query: 425 RNNFSGKIPMFLNTFRFLQKLNL 447
N S + L LNL
Sbjct: 109 YNYLSNLSSSWFKPLSSLTFLNL 131
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 288 IPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFV 347
IPS L + +DL N I S L C+ LQ L L+ N ++ L S
Sbjct: 46 IPSGLTEAV--KSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 103
Query: 348 LLDLSRNHLS 357
LDLS N+LS
Sbjct: 104 HLDLSYNYLS 113
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 38.1 bits (87), Expect = 0.019, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 262 GSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQ 321
S+PT G QVL L+ N+I+ P L LT +DL N + Q
Sbjct: 30 ASVPT--GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 87
Query: 322 LQKLDLSDNNLSGTIPR 338
L +L L+DN L +IPR
Sbjct: 88 LTQLSLNDNQLK-SIPR 103
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + FGL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 201
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + D GL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + DF L+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 22/98 (22%)
Query: 681 LEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740
L+Y+H I+H DLKPSN+ ++ + + D GL+R ++ D+ + GY
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR----HTDDEMT--------GY 182
Query: 741 VAPEYGALGEVSTHG-------DEYSFGILMLEMFTGK 771
VA + E+ + D +S G +M E+ TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 37.7 bits (86), Expect = 0.024, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 262 GSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQ 321
S+PT G QVL L+ N+I+ P L LT +DL N + Q
Sbjct: 22 ASVPT--GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 79
Query: 322 LQKLDLSDNNLSGTIPR 338
L +L L+DN L +IPR
Sbjct: 80 LTQLSLNDNQLK-SIPR 95
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 201
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 201
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA---HVGDFGLSRL 720
KL+L L +A + N +E++H S +H D+KP N L+ A ++ DFGL++
Sbjct: 99 KLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155
Query: 721 LHDNSPDQTSTSR----VKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDD 776
D S Q R + G+ Y + E S D S G +++ G P
Sbjct: 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215
Query: 777 MFEEGLSLHKYAKM 790
+ + G KY K+
Sbjct: 216 L-KAGTKKQKYEKI 228
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 201
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 201
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 201
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 201
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 201
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 672 SIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA--HVGDFGLSRLLHDNSPDQT 729
A + L+ LH I+HCDLKP N+LL + + V DFG S H Q
Sbjct: 204 KFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH-----QR 255
Query: 730 STSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG 770
++ Y APE D +S G ++ E+ TG
Sbjct: 256 VYXXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 145 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 200
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 201
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 201
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 144 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 199
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 200 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 229
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 145 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 200
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 687 HCH-TSIVHCDLKPSNVLLD-NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
HCH ++H D+K N+L+D N + DFG LL D T + G+ Y PE
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-----TVYTDFDGTRVYSPPE 226
Query: 745 YGALGEVSTHGDE---YSFGILMLEMFTGKRP 773
+ + HG +S GIL+ +M G P
Sbjct: 227 W--IRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 687 HCHT-SIVHCDLKPSNVLLDNEMVA-HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
+CH+ I+H D+KP NV++D+E + D+GL+ H P Q RV S + PE
Sbjct: 151 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQEYNVRV-ASRYFKGPE 206
Query: 745 YGALGEVSTHG-DEYSFGILMLEMFTGKRP 773
++ + D +S G ++ M K P
Sbjct: 207 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 236
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 691 SIVHCDLKPSNVLLDN--EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL 748
SI+HCDLKP N+LL N + DFG S L Q SR Y +PE
Sbjct: 179 SIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL-GQRIYQXIQSRF-----YRSPEVLLG 232
Query: 749 GEVSTHGDEYSFGILMLEMFTGK 771
D +S G +++EM TG+
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGE 255
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 687 HCH-TSIVHCDLKPSNVLLD-NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
HCH ++H D+K N+L+D N + DFG LL D T + G+ Y PE
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-----TVYTDFDGTRVYSPPE 226
Query: 745 YGALGEVSTHGDE---YSFGILMLEMFTGKRP 773
+ + HG +S GIL+ +M G P
Sbjct: 227 W--IRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 687 HCH-TSIVHCDLKPSNVLLD-NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
HCH ++H D+K N+L+D N + DFG LL D T + G+ Y PE
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-----TVYTDFDGTRVYSPPE 226
Query: 745 YGALGEVSTHGDE---YSFGILMLEMFTGKRP 773
+ + HG +S GIL+ +M G P
Sbjct: 227 W--IRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 687 HCH-TSIVHCDLKPSNVLLD-NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
HCH ++H D+K N+L+D N + DFG LL D T + G+ Y PE
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-----TVYTDFDGTRVYSPPE 183
Query: 745 YGALGEVSTHGDE---YSFGILMLEMFTGKRP 773
+ + HG +S GIL+ +M G P
Sbjct: 184 W--IRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 687 HCH-TSIVHCDLKPSNVLLD-NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
HCH ++H D+K N+L+D N + DFG LL D T + G+ Y PE
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-----TVYTDFDGTRVYSPPE 183
Query: 745 YGALGEVSTHGDE---YSFGILMLEMFTGKRP 773
+ + HG +S GIL+ +M G P
Sbjct: 184 W--IRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 687 HCH-TSIVHCDLKPSNVLLD-NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPE 744
HCH ++H D+K N+L+D N + DFG LL D T + G+ Y PE
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-----TVYTDFDGTRVYSPPE 211
Query: 745 YGALGEVSTHGDE---YSFGILMLEMFTGKRP 773
+ + HG +S GIL+ +M G P
Sbjct: 212 W--IRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 680 VLEYLHHHCHT-SIVHCDLKPSNVLLD-NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGS 737
VLE + H CH ++H D+K N+L+D N + DFG LL D +RV
Sbjct: 119 VLEAVRH-CHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV--- 174
Query: 738 IGYVAPEYGALGEVSTHGDE---YSFGILMLEMFTGKRP 773
Y PE+ + HG +S GIL+ +M G P
Sbjct: 175 --YSPPEW--IRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,711,743
Number of Sequences: 62578
Number of extensions: 916728
Number of successful extensions: 4382
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 460
Number of HSP's that attempted gapping in prelim test: 2424
Number of HSP's gapped (non-prelim): 1423
length of query: 871
length of database: 14,973,337
effective HSP length: 107
effective length of query: 764
effective length of database: 8,277,491
effective search space: 6324003124
effective search space used: 6324003124
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)