Query 002883
Match_columns 871
No_of_seqs 848 out of 5890
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 05:18:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002883.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002883hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 7.8E-60 2.7E-64 569.0 32.6 469 3-495 213-755 (768)
2 3rgz_A Protein brassinosteroid 100.0 6.6E-56 2.2E-60 534.8 34.5 469 2-481 112-721 (768)
3 3t6q_A CD180 antigen; protein- 100.0 1.5E-54 5.2E-59 511.5 35.6 464 6-482 27-566 (606)
4 1ziw_A TOLL-like receptor 3; i 100.0 2E-53 6.7E-58 509.0 37.5 474 4-483 39-630 (680)
5 3j0a_A TOLL-like receptor 5; m 100.0 4.6E-53 1.6E-57 515.3 36.0 459 14-483 24-567 (844)
6 3vq2_A TLR4, TOLL-like recepto 100.0 9.9E-53 3.4E-57 496.1 32.4 467 5-483 25-565 (606)
7 3t6q_A CD180 antigen; protein- 100.0 2.1E-51 7.1E-56 484.8 36.0 453 16-475 14-535 (606)
8 4asz_A BDNF/NT-3 growth factor 100.0 2.9E-52 1E-56 438.8 17.5 266 559-865 13-290 (299)
9 4fih_A Serine/threonine-protei 100.0 1.1E-51 3.7E-56 439.1 21.2 250 559-857 74-323 (346)
10 3omv_A RAF proto-oncogene seri 100.0 8.8E-52 3E-56 434.7 20.1 261 558-864 35-300 (307)
11 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-49 4.5E-54 475.9 41.0 460 5-475 18-572 (680)
12 4b9d_A Serine/threonine-protei 100.0 5.2E-52 1.8E-56 442.3 16.9 252 558-857 23-276 (350)
13 4aoj_A High affinity nerve gro 100.0 1.7E-51 5.9E-56 439.2 20.9 266 559-865 41-320 (329)
14 3fpq_A Serine/threonine-protei 100.0 4.7E-51 1.6E-55 426.1 22.6 251 560-857 26-282 (290)
15 4g3f_A NF-kappa-beta-inducing 100.0 2.5E-51 8.4E-56 435.2 19.8 260 558-867 57-319 (336)
16 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.5E-51 5.3E-56 431.2 16.7 249 559-856 32-283 (311)
17 3vq2_A TLR4, TOLL-like recepto 100.0 3.6E-50 1.2E-54 474.2 29.7 441 2-460 44-565 (606)
18 3j0a_A TOLL-like receptor 5; m 100.0 7E-50 2.4E-54 487.3 31.3 439 2-459 36-566 (844)
19 4fie_A Serine/threonine-protei 100.0 1.6E-50 5.4E-55 440.9 22.0 250 559-857 151-400 (423)
20 2z63_A TOLL-like receptor 4, v 100.0 2.1E-49 7.1E-54 464.5 32.2 450 5-483 21-538 (570)
21 3hyh_A Carbon catabolite-derep 100.0 1.6E-50 5.6E-55 418.0 19.5 247 558-857 12-262 (275)
22 4gt4_A Tyrosine-protein kinase 100.0 4.8E-51 1.6E-55 431.5 15.9 264 559-863 26-305 (308)
23 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-49 4.3E-54 463.8 24.2 460 5-480 19-514 (549)
24 4eco_A Uncharacterized protein 100.0 5E-49 1.7E-53 463.8 26.3 412 14-454 81-601 (636)
25 4ase_A Vascular endothelial gr 100.0 8.2E-50 2.8E-54 429.5 17.7 281 547-866 52-349 (353)
26 2z63_A TOLL-like receptor 4, v 100.0 1.9E-48 6.7E-53 456.2 28.6 459 2-482 40-562 (570)
27 4g31_A Eukaryotic translation 100.0 7.5E-49 2.6E-53 413.8 21.2 258 559-857 5-279 (299)
28 3ubd_A Ribosomal protein S6 ki 100.0 6.8E-50 2.3E-54 419.2 12.6 248 559-857 24-281 (304)
29 3hmm_A TGF-beta receptor type- 100.0 6.4E-49 2.2E-53 416.9 19.2 282 559-865 3-298 (303)
30 2z7x_B TOLL-like receptor 1, v 100.0 4.7E-48 1.6E-52 447.1 24.7 437 5-457 14-485 (520)
31 4ecn_A Leucine-rich repeat pro 100.0 1.7E-47 5.9E-52 456.9 26.6 446 14-480 323-870 (876)
32 2z7x_B TOLL-like receptor 1, v 100.0 4.9E-48 1.7E-52 447.0 19.3 438 17-483 3-488 (520)
33 4eco_A Uncharacterized protein 100.0 1.2E-47 4E-52 452.1 22.7 402 1-430 92-601 (636)
34 4b99_A Mitogen-activated prote 100.0 1.9E-47 6.5E-52 418.6 20.7 285 559-857 54-344 (398)
35 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-46 4.4E-51 438.5 27.3 435 2-458 38-515 (549)
36 4ecn_A Leucine-rich repeat pro 100.0 2.1E-46 7E-51 447.6 27.6 418 38-479 323-843 (876)
37 4g8a_A TOLL-like receptor 4; l 100.0 4.3E-45 1.5E-49 433.9 31.8 467 5-483 45-587 (635)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.4E-46 3.2E-50 431.4 23.0 436 5-458 45-515 (562)
39 4f9c_A Cell division cycle 7-r 100.0 4.3E-46 1.5E-50 403.8 18.2 204 557-780 19-253 (361)
40 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.2E-45 2.5E-49 423.9 22.2 442 13-483 30-517 (562)
41 3v5w_A G-protein coupled recep 100.0 8.9E-45 3.1E-49 412.6 20.4 249 558-857 188-449 (689)
42 3uto_A Twitchin; kinase, muscl 100.0 8.8E-45 3E-49 417.8 20.2 251 558-857 156-410 (573)
43 4g8a_A TOLL-like receptor 4; l 100.0 3.4E-43 1.2E-47 417.5 30.6 466 3-484 65-614 (635)
44 3fxz_A Serine/threonine-protei 100.0 1.5E-42 5.1E-47 369.6 24.2 251 558-857 19-269 (297)
45 3v47_A TOLL-like receptor 5B a 100.0 6.7E-42 2.3E-46 388.8 29.0 372 14-433 30-412 (455)
46 3v47_A TOLL-like receptor 5B a 100.0 1E-41 3.5E-46 387.3 26.8 389 40-460 12-415 (455)
47 1jl5_A Outer protein YOPM; leu 100.0 1.7E-41 5.9E-46 381.8 28.2 394 7-476 5-429 (454)
48 3s95_A LIMK-1, LIM domain kina 100.0 3.3E-42 1.1E-46 370.0 20.8 265 558-866 9-284 (310)
49 3kul_A Ephrin type-A receptor 100.0 2.3E-42 7.9E-47 373.0 18.6 264 558-867 48-316 (325)
50 3uim_A Brassinosteroid insensi 100.0 2.1E-42 7.2E-47 374.4 17.8 287 546-861 17-308 (326)
51 2qkw_B Protein kinase; three-h 100.0 3.5E-42 1.2E-46 371.7 19.1 281 555-866 35-317 (321)
52 3fe3_A MAP/microtubule affinit 100.0 4.5E-42 1.5E-46 370.1 19.6 249 557-857 13-264 (328)
53 3ugc_A Tyrosine-protein kinase 100.0 6.5E-42 2.2E-46 365.0 19.4 280 558-865 9-292 (295)
54 3zgw_A Maternal embryonic leuc 100.0 4.5E-42 1.5E-46 372.0 18.2 251 558-858 9-261 (347)
55 2yab_A Death-associated protei 100.0 2E-41 7E-46 369.3 22.3 252 558-857 11-272 (361)
56 1tki_A Titin; serine kinase, m 100.0 1.4E-41 4.9E-46 365.7 20.6 253 558-858 4-258 (321)
57 3soc_A Activin receptor type-2 100.0 5.8E-42 2E-46 369.7 17.6 284 558-866 23-320 (322)
58 2c30_A Serine/threonine-protei 100.0 7.6E-41 2.6E-45 360.5 25.1 262 548-858 24-295 (321)
59 3q4u_A Activin receptor type-1 100.0 1.7E-41 5.7E-46 363.1 19.2 267 558-862 7-300 (301)
60 3p86_A Serine/threonine-protei 100.0 2.3E-41 7.8E-46 362.3 20.3 262 556-865 34-299 (309)
61 1o6l_A RAC-beta serine/threoni 100.0 3.2E-41 1.1E-45 364.4 21.5 250 558-858 4-261 (337)
62 4eqm_A Protein kinase; transfe 100.0 1.8E-41 6.2E-46 360.8 19.0 261 558-863 10-274 (294)
63 2qol_A Ephrin receptor; recept 100.0 1.5E-41 5.2E-46 373.2 18.5 263 558-866 44-311 (373)
64 2psq_A Fibroblast growth facto 100.0 3.7E-41 1.3E-45 370.0 21.4 269 558-867 80-367 (370)
65 3cbl_A C-FES, proto-oncogene t 100.0 7.9E-42 2.7E-46 376.8 15.3 263 557-866 112-376 (377)
66 3c0i_A Peripheral plasma membr 100.0 5.7E-41 2E-45 366.1 22.0 255 559-857 24-286 (351)
67 3tki_A Serine/threonine-protei 100.0 2E-41 6.9E-46 365.1 17.6 255 558-858 6-262 (323)
68 2y0a_A Death-associated protei 100.0 6.4E-41 2.2E-45 361.9 21.5 251 559-857 11-271 (326)
69 3lb7_A RAF proto-oncogene seri 100.0 5.6E-41 1.9E-45 359.1 20.6 263 557-865 34-301 (307)
70 4aw2_A Serine/threonine-protei 100.0 2.3E-41 7.8E-46 377.0 17.2 259 551-857 66-338 (437)
71 1jl5_A Outer protein YOPM; leu 100.0 2.5E-40 8.5E-45 372.4 25.7 380 4-458 24-434 (454)
72 3ork_A Serine/threonine protei 100.0 1.2E-41 4E-46 365.7 14.0 265 558-862 11-279 (311)
73 4hcu_A Tyrosine-protein kinase 100.0 4.4E-41 1.5E-45 353.4 18.0 258 558-865 9-267 (269)
74 3vhe_A Vascular endothelial gr 100.0 3E-41 1E-45 370.8 17.3 281 547-866 10-357 (359)
75 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.1E-41 1.7E-45 352.7 18.1 258 558-865 7-265 (268)
76 3g33_A Cell division protein k 100.0 3E-41 1E-45 362.1 16.7 280 557-857 7-296 (308)
77 3soa_A Calcium/calmodulin-depe 100.0 6.4E-41 2.2E-45 375.0 20.0 254 557-857 9-267 (444)
78 3l9p_A Anaplastic lymphoma kin 100.0 2.1E-41 7.1E-46 371.7 15.7 268 558-866 70-347 (367)
79 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.8E-41 9.7E-46 367.3 16.5 251 556-857 20-280 (353)
80 2bdw_A Hypothetical protein K1 100.0 6.1E-41 2.1E-45 366.8 18.4 253 558-858 28-285 (362)
81 3oz6_A Mitogen-activated prote 100.0 1E-40 3.4E-45 370.0 19.9 287 557-858 7-329 (388)
82 1kob_A Twitchin; kinase, intra 100.0 1E-40 3.5E-45 367.1 19.7 254 558-858 50-305 (387)
83 2nru_A Interleukin-1 receptor- 100.0 5.4E-40 1.8E-44 352.3 24.9 285 545-864 11-306 (307)
84 1fot_A TPK1 delta, CAMP-depend 100.0 2E-40 6.9E-45 355.6 20.9 246 558-857 5-258 (318)
85 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.7E-41 1.3E-45 363.4 15.0 248 558-858 8-259 (336)
86 3niz_A Rhodanese family protei 100.0 1.6E-40 5.6E-45 356.3 19.9 275 558-857 20-300 (311)
87 4fr4_A YANK1, serine/threonine 100.0 2.4E-40 8.4E-45 362.6 21.7 250 558-857 14-271 (384)
88 4euu_A Serine/threonine-protei 100.0 1E-40 3.5E-45 359.8 18.1 284 558-862 8-307 (319)
89 3lxl_A Tyrosine-protein kinase 100.0 1.3E-40 4.6E-45 360.3 18.9 280 558-866 22-305 (327)
90 3ttj_A Mitogen-activated prote 100.0 4E-40 1.4E-44 371.8 23.6 280 558-858 61-356 (464)
91 1xjd_A Protein kinase C, theta 100.0 6.9E-41 2.4E-45 362.7 16.4 251 555-856 13-268 (345)
92 3rp9_A Mitogen-activated prote 100.0 1.4E-40 4.8E-45 377.3 19.2 286 559-858 53-397 (458)
93 3o0g_A Cell division protein k 100.0 5.9E-41 2E-45 356.9 15.1 277 559-857 2-282 (292)
94 3f3z_A Calcium/calmodulin-depe 100.0 3.6E-40 1.2E-44 348.1 20.8 251 558-857 8-261 (277)
95 2izr_A Casein kinase I isoform 100.0 3.3E-40 1.1E-44 357.6 21.0 263 558-865 8-282 (330)
96 2zv2_A Calcium/calmodulin-depe 100.0 2.3E-40 7.7E-45 353.5 19.2 252 558-857 12-292 (298)
97 4f0f_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 353.6 16.9 253 558-862 18-287 (287)
98 1mp8_A Focal adhesion kinase 1 100.0 1.3E-40 4.6E-45 352.0 17.1 262 557-867 13-279 (281)
99 1o6v_A Internalin A; bacterial 100.0 4.8E-39 1.6E-43 365.5 31.2 345 13-430 45-389 (466)
100 3qd2_B Eukaryotic translation 100.0 4.3E-40 1.5E-44 357.4 21.5 259 558-857 5-325 (332)
101 2w4o_A Calcium/calmodulin-depe 100.0 2.1E-40 7.2E-45 361.1 19.1 251 558-857 52-305 (349)
102 1csn_A Casein kinase-1; phosph 100.0 3.2E-40 1.1E-44 352.6 20.1 264 558-865 9-284 (298)
103 2ivs_A Proto-oncogene tyrosine 100.0 1.9E-40 6.4E-45 357.2 18.0 269 557-866 21-313 (314)
104 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.5E-40 1.2E-44 358.5 20.3 246 558-857 40-293 (350)
105 4dc2_A Protein kinase C IOTA t 100.0 3.7E-40 1.3E-44 362.4 20.4 202 557-776 50-255 (396)
106 3n9x_A Phosphotransferase; mal 100.0 2.7E-40 9.2E-45 371.1 19.6 285 558-857 25-361 (432)
107 2i1m_A Macrophage colony-stimu 100.0 9.1E-41 3.1E-45 362.7 15.3 276 555-870 42-332 (333)
108 3gen_A Tyrosine-protein kinase 100.0 2.4E-40 8.3E-45 350.5 18.2 259 557-865 22-281 (283)
109 3og7_A AKAP9-BRAF fusion prote 100.0 1.2E-40 4.2E-45 353.8 15.9 262 557-864 22-288 (289)
110 3poz_A Epidermal growth factor 100.0 1.3E-40 4.4E-45 360.0 16.2 260 558-865 14-279 (327)
111 3gni_B Strad alpha; kinase fol 100.0 2.6E-40 8.9E-45 367.0 19.1 287 557-858 23-334 (389)
112 3op5_A Serine/threonine-protei 100.0 1E-40 3.5E-45 366.6 15.6 275 558-865 34-330 (364)
113 3qup_A Tyrosine-protein kinase 100.0 2.4E-40 8.2E-45 357.8 18.2 271 557-864 21-298 (323)
114 2x4f_A Myosin light chain kina 100.0 2.8E-40 9.6E-45 362.9 18.9 248 563-857 93-342 (373)
115 4e5w_A Tyrosine-protein kinase 100.0 3.5E-40 1.2E-44 352.9 19.2 277 558-863 20-301 (302)
116 2pmi_A Negative RE, cyclin-dep 100.0 3.4E-40 1.2E-44 355.0 19.0 281 557-857 3-293 (317)
117 2i0e_A Protein kinase C-beta I 100.0 3.3E-40 1.1E-44 358.5 18.8 250 557-857 18-276 (353)
118 3a8x_A Protein kinase C IOTA t 100.0 7.7E-40 2.6E-44 355.3 21.6 201 558-776 8-212 (345)
119 2a2a_A Death-associated protei 100.0 7.4E-40 2.5E-44 353.3 21.2 252 558-857 11-272 (321)
120 3llt_A Serine/threonine kinase 100.0 3.7E-40 1.3E-44 362.0 19.1 215 543-778 19-263 (360)
121 1cm8_A Phosphorylated MAP kina 100.0 3.7E-40 1.3E-44 361.6 19.0 279 558-857 24-307 (367)
122 3kfa_A Tyrosine-protein kinase 100.0 2.8E-40 9.7E-45 351.1 17.5 262 557-866 11-273 (288)
123 3qyz_A Mitogen-activated prote 100.0 4.4E-40 1.5E-44 361.5 19.3 284 558-857 26-313 (364)
124 2buj_A Serine/threonine-protei 100.0 5.9E-40 2E-44 353.8 19.8 269 558-863 28-305 (317)
125 3uc3_A Serine/threonine-protei 100.0 3E-40 1E-44 361.5 17.5 253 558-858 19-275 (361)
126 3kk8_A Calcium/calmodulin depe 100.0 8.1E-40 2.8E-44 346.8 20.1 253 558-858 5-262 (284)
127 1mqb_A Ephrin type-A receptor 100.0 6E-40 2.1E-44 355.6 19.6 264 558-867 43-312 (333)
128 3v8s_A RHO-associated protein 100.0 8.5E-41 2.9E-45 369.6 12.8 256 552-858 62-330 (410)
129 3dtc_A Mitogen-activated prote 100.0 4E-40 1.4E-44 346.5 17.3 254 558-862 6-271 (271)
130 4fvq_A Tyrosine-protein kinase 100.0 2.3E-40 7.8E-45 352.0 15.6 251 558-863 7-274 (289)
131 2y94_A 5'-AMP-activated protei 100.0 6.1E-40 2.1E-44 369.2 19.8 248 558-857 15-266 (476)
132 1ob3_A PFPK5, cell division co 100.0 4.9E-40 1.7E-44 349.0 18.0 269 559-857 2-280 (288)
133 3cc6_A Protein tyrosine kinase 100.0 4.2E-40 1.4E-44 348.3 17.3 263 557-868 10-277 (281)
134 3kex_A Receptor tyrosine-prote 100.0 4E-40 1.4E-44 356.0 17.5 260 558-865 12-277 (325)
135 3kn6_A Ribosomal protein S6 ki 100.0 2.5E-40 8.6E-45 356.9 15.8 246 564-857 16-270 (325)
136 1t46_A HOMO sapiens V-KIT hard 100.0 5.5E-40 1.9E-44 353.4 18.3 269 557-865 21-308 (313)
137 2h34_A Serine/threonine-protei 100.0 1.2E-39 3.9E-44 349.7 20.7 262 557-865 32-297 (309)
138 1o6v_A Internalin A; bacterial 100.0 1.5E-38 5.1E-43 361.5 31.0 348 37-457 45-392 (466)
139 3tt0_A Basic fibroblast growth 100.0 7.3E-40 2.5E-44 361.9 19.6 268 558-866 68-354 (382)
140 2eue_A Carbon catabolite derep 100.0 5.8E-40 2E-44 346.0 17.7 248 558-858 12-263 (275)
141 3fdn_A Serine/threonine-protei 100.0 7.5E-40 2.6E-44 346.0 18.6 249 557-858 7-258 (279)
142 1k9a_A Carboxyl-terminal SRC k 100.0 9.5E-40 3.3E-44 368.4 20.6 255 557-865 191-446 (450)
143 2eva_A TAK1 kinase - TAB1 chim 100.0 1.4E-39 4.7E-44 348.6 20.8 257 558-865 7-264 (307)
144 1t4h_A Serine/threonine-protei 100.0 2.4E-39 8.3E-44 344.1 22.5 252 559-857 26-282 (290)
145 2wqm_A Serine/threonine-protei 100.0 1.2E-39 4.2E-44 350.0 20.3 265 558-866 31-299 (310)
146 1rjb_A FL cytokine receptor; k 100.0 5.8E-40 2E-44 358.2 17.6 271 556-866 42-336 (344)
147 1luf_A Muscle-specific tyrosin 100.0 4.1E-40 1.4E-44 359.3 16.4 268 557-865 45-336 (343)
148 4hgt_A Casein kinase I isoform 100.0 1E-39 3.4E-44 348.3 19.1 267 557-866 7-282 (296)
149 2w1i_A JAK2; chromosomal rearr 100.0 1.2E-39 4E-44 352.6 19.8 281 558-866 40-324 (326)
150 1xbb_A Tyrosine-protein kinase 100.0 4.2E-40 1.4E-44 350.1 15.9 263 557-867 14-282 (291)
151 2id5_A Lingo-1, leucine rich r 100.0 3.8E-39 1.3E-43 368.1 25.0 350 114-484 15-364 (477)
152 3lzb_A Epidermal growth factor 100.0 4.8E-40 1.6E-44 355.2 16.6 261 558-866 14-280 (327)
153 1opk_A P150, C-ABL, proto-onco 100.0 3.3E-40 1.1E-44 376.3 16.1 257 558-862 219-476 (495)
154 3hko_A Calcium/calmodulin-depe 100.0 1.1E-39 3.8E-44 356.2 19.4 267 555-858 22-331 (345)
155 2v62_A Serine/threonine-protei 100.0 5.1E-40 1.7E-44 358.2 16.7 268 558-862 36-326 (345)
156 2ac3_A MAP kinase-interacting 100.0 9.2E-40 3.1E-44 352.1 18.4 271 558-857 11-295 (316)
157 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.1E-40 1.4E-44 356.4 15.7 280 552-857 27-318 (329)
158 2xir_A Vascular endothelial gr 100.0 6.2E-40 2.1E-44 353.5 17.0 281 547-866 15-312 (316)
159 3bhy_A Death-associated protei 100.0 3.1E-39 1.1E-43 342.1 22.0 257 559-863 5-273 (283)
160 3kmu_A ILK, integrin-linked ki 100.0 1E-39 3.6E-44 343.4 18.2 255 558-864 9-270 (271)
161 3a62_A Ribosomal protein S6 ki 100.0 1E-39 3.5E-44 352.6 18.6 249 558-857 16-276 (327)
162 3t9t_A Tyrosine-protein kinase 100.0 8.1E-40 2.8E-44 343.4 17.3 258 558-865 7-265 (267)
163 3brb_A Proto-oncogene tyrosine 100.0 1.3E-39 4.6E-44 350.2 19.4 273 556-865 31-309 (313)
164 3is5_A Calcium-dependent prote 100.0 1.6E-39 5.4E-44 344.4 19.6 253 559-857 22-278 (285)
165 3lxp_A Non-receptor tyrosine-p 100.0 1.4E-39 4.6E-44 350.7 19.4 278 559-867 30-313 (318)
166 3mtl_A Cell division protein k 100.0 2.9E-40 1E-44 356.7 14.1 276 559-857 2-281 (324)
167 2vd5_A DMPK protein; serine/th 100.0 8.5E-40 2.9E-44 361.8 18.1 262 551-857 53-327 (412)
168 1nxk_A MAP kinase-activated pr 100.0 1.5E-39 5.2E-44 360.6 20.1 255 558-858 60-322 (400)
169 1qcf_A Haematopoetic cell kina 100.0 4.1E-40 1.4E-44 372.1 15.8 259 556-864 185-444 (454)
170 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-39 3.9E-44 350.0 18.4 245 559-857 57-304 (311)
171 3uzp_A CKI-delta, CKID, casein 100.0 1.6E-39 5.4E-44 346.8 19.4 266 558-866 8-282 (296)
172 2fst_X Mitogen-activated prote 100.0 5.2E-40 1.8E-44 359.9 16.0 279 558-857 28-311 (367)
173 2r5t_A Serine/threonine-protei 100.0 4.9E-40 1.7E-44 359.8 15.7 250 558-858 37-290 (373)
174 4agu_A Cyclin-dependent kinase 100.0 6.2E-40 2.1E-44 352.5 16.2 277 559-857 3-284 (311)
175 2yex_A Serine/threonine-protei 100.0 1.8E-39 6.3E-44 342.5 19.4 254 558-857 6-261 (276)
176 4eut_A Serine/threonine-protei 100.0 2.9E-40 9.9E-45 366.8 13.7 285 558-864 8-309 (396)
177 3g2f_A Bone morphogenetic prot 100.0 7.4E-40 2.5E-44 356.1 16.6 287 557-865 11-319 (336)
178 2pvf_A Fibroblast growth facto 100.0 1.6E-39 5.4E-44 352.8 19.0 269 557-866 33-320 (334)
179 3mdy_A Bone morphogenetic prot 100.0 4.3E-39 1.5E-43 350.3 22.5 273 557-866 35-333 (337)
180 1u59_A Tyrosine-protein kinase 100.0 1.5E-39 5E-44 345.2 18.3 262 559-867 9-275 (287)
181 1qpc_A LCK kinase; alpha beta 100.0 1.9E-39 6.4E-44 342.9 19.0 259 557-865 11-270 (279)
182 4ejn_A RAC-alpha serine/threon 100.0 5.5E-40 1.9E-44 370.6 15.6 250 557-857 146-404 (446)
183 3dls_A PAS domain-containing s 100.0 4E-40 1.4E-44 356.7 13.3 244 557-858 22-275 (335)
184 2xrw_A Mitogen-activated prote 100.0 8E-39 2.8E-43 352.1 23.8 283 558-858 24-319 (371)
185 2jam_A Calcium/calmodulin-depe 100.0 1.7E-39 5.8E-44 347.8 17.9 251 558-857 8-261 (304)
186 2qr7_A Ribosomal protein S6 ki 100.0 9E-40 3.1E-44 354.3 15.6 251 558-858 21-278 (342)
187 2a19_B Interferon-induced, dou 100.0 2.1E-39 7.1E-44 343.7 18.0 256 558-866 10-276 (284)
188 3nsz_A CK II alpha, casein kin 100.0 1.2E-39 4.3E-44 353.4 16.4 277 558-857 35-319 (330)
189 2yfx_A Tyrosine-protein kinase 100.0 1.6E-39 5.6E-44 351.7 17.3 268 558-866 29-306 (327)
190 2y7j_A Phosphorylase B kinase 100.0 5.8E-39 2E-43 352.0 21.7 255 555-857 90-359 (365)
191 3dbq_A Dual specificity protei 100.0 1.5E-39 5.3E-44 354.1 17.0 252 558-858 8-274 (343)
192 2rku_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 343.7 19.2 250 558-858 14-266 (294)
193 2vgo_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 341.5 19.4 248 558-858 13-263 (284)
194 3lm5_A Serine/threonine-protei 100.0 1.3E-39 4.6E-44 352.0 16.2 261 552-858 21-288 (327)
195 1u5q_A Serine/threonine protei 100.0 2.2E-39 7.5E-44 352.5 17.8 247 559-858 54-306 (348)
196 3cok_A Serine/threonine-protei 100.0 1.3E-39 4.5E-44 343.9 15.5 251 557-857 9-262 (278)
197 3i6u_A CDS1, serine/threonine- 100.0 1.9E-39 6.4E-44 362.4 17.5 254 557-858 133-400 (419)
198 3gxj_A TGF-beta receptor type- 100.0 4.4E-41 1.5E-45 360.2 4.0 267 559-865 3-298 (303)
199 3pls_A Macrophage-stimulating 100.0 5.6E-39 1.9E-43 342.9 20.2 263 560-866 22-289 (298)
200 2owb_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 349.9 18.8 250 558-858 40-292 (335)
201 3lij_A Calcium/calmodulin depe 100.0 4E-39 1.4E-43 368.4 20.1 251 559-858 37-292 (494)
202 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.5E-39 5E-44 367.1 15.9 257 557-863 182-439 (452)
203 2i6l_A Mitogen-activated prote 100.0 3.1E-39 1.1E-43 348.7 17.9 282 558-857 10-305 (320)
204 3byv_A Rhoptry kinase; malaria 100.0 2.8E-40 9.6E-45 364.8 9.9 261 558-866 72-370 (377)
205 2clq_A Mitogen-activated prote 100.0 1.3E-38 4.3E-43 339.6 22.3 254 559-857 22-278 (295)
206 3eb0_A Putative uncharacterize 100.0 2.3E-39 7.8E-44 358.3 17.1 281 555-857 3-321 (383)
207 3mwu_A Calmodulin-domain prote 100.0 3.9E-39 1.3E-43 367.9 19.5 252 558-858 21-277 (486)
208 3f66_A Hepatocyte growth facto 100.0 5E-39 1.7E-43 343.2 19.1 264 558-866 24-293 (298)
209 1b6c_B TGF-B superfamily recep 100.0 5.2E-39 1.8E-43 350.4 19.6 272 555-866 38-338 (342)
210 3q5i_A Protein kinase; CDPK, m 100.0 8.3E-39 2.8E-43 366.7 22.1 252 558-858 35-302 (504)
211 2acx_A G protein-coupled recep 100.0 3.5E-39 1.2E-43 367.3 18.7 253 557-857 182-444 (576)
212 2zmd_A Dual specificity protei 100.0 3.1E-39 1.1E-43 357.0 17.8 251 559-858 56-321 (390)
213 3c1x_A Hepatocyte growth facto 100.0 1.7E-39 5.9E-44 356.3 15.6 261 560-865 90-356 (373)
214 2b9h_A MAP kinase FUS3, mitoge 100.0 5.8E-39 2E-43 351.6 19.7 284 558-857 10-305 (353)
215 1byg_A CSK, protein (C-termina 100.0 2.2E-39 7.6E-44 342.2 15.7 254 558-865 20-274 (278)
216 3bz5_A Internalin-J, INLJ; leu 100.0 2.5E-38 8.6E-43 356.4 25.1 361 5-459 33-393 (457)
217 3pg1_A Mitogen-activated prote 100.0 3.2E-39 1.1E-43 354.8 17.4 288 551-857 14-316 (362)
218 3kvw_A DYRK2, dual specificity 100.0 5.4E-39 1.8E-43 359.6 19.3 202 558-780 96-305 (429)
219 3bz5_A Internalin-J, INLJ; leu 100.0 2E-38 6.9E-43 357.1 23.9 338 6-436 57-394 (457)
220 2w5a_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 340.7 16.8 259 558-860 5-270 (279)
221 1p4o_A Insulin-like growth fac 100.0 8.8E-40 3E-44 353.3 12.2 269 553-862 19-297 (322)
222 1fvr_A Tyrosine-protein kinase 100.0 4E-39 1.4E-43 348.7 17.2 265 558-866 24-302 (327)
223 3a7i_A MST3 kinase, serine/thr 100.0 1.9E-38 6.3E-43 339.6 22.1 251 558-859 21-272 (303)
224 2j7t_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 344.2 17.4 254 557-857 17-275 (302)
225 2h6d_A 5'-AMP-activated protei 100.0 7.9E-39 2.7E-43 337.6 18.7 249 558-858 10-262 (276)
226 3com_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 341.2 22.3 252 557-857 27-278 (314)
227 4aaa_A Cyclin-dependent kinase 100.0 2.2E-39 7.4E-44 351.3 14.7 277 558-858 24-307 (331)
228 3nyv_A Calmodulin-domain prote 100.0 3E-39 1E-43 369.0 16.7 251 558-857 25-281 (484)
229 3ll6_A Cyclin G-associated kin 100.0 7.8E-39 2.7E-43 348.3 19.0 266 558-866 27-310 (337)
230 2jii_A Serine/threonine-protei 100.0 2.6E-39 9E-44 353.7 15.3 269 558-866 41-338 (352)
231 1u46_A ACK-1, activated CDC42 100.0 2.5E-39 8.4E-44 344.4 14.7 263 558-866 17-286 (291)
232 3eqc_A Dual specificity mitoge 100.0 5.4E-39 1.8E-43 352.7 17.8 280 558-858 32-325 (360)
233 2r3i_A Cell division protein k 100.0 3.7E-39 1.3E-43 344.5 16.0 279 558-857 2-283 (299)
234 1ua2_A CAK, cell division prot 100.0 5.3E-39 1.8E-43 350.3 17.5 279 556-858 7-292 (346)
235 4exu_A Mitogen-activated prote 100.0 8.3E-39 2.9E-43 352.0 18.9 279 558-858 41-324 (371)
236 3mi9_A Cell division protein k 100.0 9.3E-39 3.2E-43 349.5 18.8 285 558-857 16-311 (351)
237 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1E-38 3.4E-43 351.0 18.3 258 557-865 63-340 (365)
238 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.6E-38 5.6E-43 361.3 20.5 255 558-857 184-448 (543)
239 1phk_A Phosphorylase kinase; g 100.0 1.8E-38 6E-43 339.0 19.2 253 557-857 15-283 (298)
240 2ozo_A Tyrosine-protein kinase 100.0 9.8E-39 3.3E-43 372.6 18.8 258 561-865 337-599 (613)
241 4fl3_A Tyrosine-protein kinase 100.0 9.3E-39 3.2E-43 373.6 18.5 252 565-864 375-631 (635)
242 2ycf_A Serine/threonine-protei 100.0 1.2E-38 3.9E-43 344.3 17.6 252 558-857 9-274 (322)
243 2wtk_C Serine/threonine-protei 100.0 4.2E-38 1.4E-42 337.3 21.8 255 558-858 4-264 (305)
244 3sv0_A Casein kinase I-like; t 100.0 1.9E-38 6.6E-43 357.7 19.9 267 558-865 6-279 (483)
245 2x7f_A TRAF2 and NCK-interacti 100.0 1.9E-38 6.4E-43 343.5 18.8 260 555-857 20-286 (326)
246 3pfq_A PKC-B, PKC-beta, protei 100.0 2.5E-38 8.6E-43 372.5 20.5 251 556-857 338-597 (674)
247 1j1b_A Glycogen synthase kinas 100.0 1.2E-38 4E-43 356.1 16.6 276 559-857 54-336 (420)
248 3fme_A Dual specificity mitoge 100.0 1.9E-38 6.4E-43 337.4 17.1 255 558-857 6-266 (290)
249 2vx3_A Dual specificity tyrosi 100.0 2.7E-38 9.1E-43 349.6 18.3 204 557-779 52-263 (382)
250 2id5_A Lingo-1, leucine rich r 100.0 1.4E-37 4.8E-42 355.1 24.8 327 137-483 13-340 (477)
251 1blx_A Cyclin-dependent kinase 100.0 1.6E-38 5.5E-43 344.0 16.1 280 557-857 9-296 (326)
252 2h8h_A Proto-oncogene tyrosine 100.0 5.9E-39 2E-43 369.3 13.2 257 557-863 265-522 (535)
253 3rgf_A Cyclin-dependent kinase 100.0 1.9E-38 6.5E-43 353.7 16.8 209 560-777 21-239 (405)
254 1x8b_A WEE1HU, WEE1-like prote 100.0 6.4E-38 2.2E-42 333.0 20.1 248 558-858 10-280 (289)
255 3an0_A Dual specificity mitoge 100.0 3.6E-38 1.2E-42 343.3 18.0 256 557-857 49-310 (340)
256 2vwi_A Serine/threonine-protei 100.0 5E-39 1.7E-43 344.2 10.6 271 556-857 12-287 (303)
257 3coi_A Mitogen-activated prote 100.0 2.9E-38 1E-42 345.7 16.7 277 559-857 24-305 (353)
258 3q60_A ROP5B; pseudokinase, tr 100.0 6.4E-39 2.2E-43 353.2 11.5 260 558-857 61-352 (371)
259 4e7w_A Glycogen synthase kinas 100.0 6.1E-38 2.1E-42 347.5 18.9 277 558-857 39-321 (394)
260 3e3p_A Protein kinase, putativ 100.0 9.2E-38 3.1E-42 343.1 20.2 288 552-857 16-314 (360)
261 2wei_A Calmodulin-domain prote 100.0 5.2E-38 1.8E-42 333.3 17.6 252 557-857 20-276 (287)
262 1vzo_A Ribosomal protein S6 ki 100.0 2.7E-38 9.2E-43 345.5 15.2 254 558-859 53-323 (355)
263 1z57_A Dual specificity protei 100.0 1.3E-37 4.5E-42 338.9 20.4 279 558-858 13-329 (339)
264 1wak_A Serine/threonine-protei 100.0 1.2E-37 4.2E-42 347.1 19.9 204 558-777 36-296 (397)
265 2pml_X PFPK7, Ser/Thr protein 100.0 5.7E-38 2E-42 343.0 16.7 265 558-857 30-322 (348)
266 1zy4_A Serine/threonine-protei 100.0 2E-37 7E-42 331.6 20.2 258 558-858 5-284 (303)
267 2j0j_A Focal adhesion kinase 1 100.0 1.1E-37 3.8E-42 365.8 18.8 261 557-866 388-653 (656)
268 3fhr_A MAP kinase-activated pr 100.0 7.6E-38 2.6E-42 339.4 16.1 258 558-858 27-288 (336)
269 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.9E-38 1E-42 340.9 11.1 263 557-868 31-306 (319)
270 3cek_A Dual specificity protei 100.0 1.9E-37 6.6E-42 333.3 16.9 253 557-858 26-293 (313)
271 2eu9_A Dual specificity protei 100.0 5.8E-37 2E-41 336.1 20.2 277 558-857 18-333 (355)
272 1q8y_A SR protein kinase; tran 100.0 1.9E-37 6.5E-42 342.4 16.2 281 558-857 18-333 (373)
273 3a99_A Proto-oncogene serine/t 100.0 5.1E-38 1.7E-42 338.5 10.0 242 557-857 41-293 (320)
274 3aln_A Dual specificity mitoge 100.0 2.1E-37 7.1E-42 335.3 14.0 260 558-858 21-286 (327)
275 2iwi_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 334.6 12.1 243 556-857 28-283 (312)
276 2rio_A Serine/threonine-protei 100.0 6.2E-37 2.1E-41 343.7 17.9 257 559-857 15-295 (434)
277 3o6n_A APL1; leucine-rich repe 100.0 5.1E-36 1.7E-40 332.7 23.6 338 109-483 44-381 (390)
278 2dyl_A Dual specificity mitoge 100.0 7.2E-37 2.5E-41 329.8 15.5 253 558-858 24-284 (318)
279 3p23_A Serine/threonine-protei 100.0 8.2E-37 2.8E-41 341.4 15.3 251 558-857 23-283 (432)
280 3qa8_A MGC80376 protein; kinas 100.0 4.7E-37 1.6E-41 352.6 12.9 287 557-864 12-309 (676)
281 3o6n_A APL1; leucine-rich repe 100.0 1.2E-35 4.3E-40 329.6 22.0 310 13-382 44-353 (390)
282 3uqc_A Probable conserved tran 100.0 2.8E-36 9.6E-41 318.5 15.4 235 559-867 31-268 (286)
283 3oja_B Anopheles plasmodium-re 100.0 2.5E-35 8.6E-40 345.2 23.2 342 109-488 50-392 (597)
284 4fmz_A Internalin; leucine ric 100.0 2.1E-34 7.3E-39 314.4 28.1 263 165-453 84-346 (347)
285 4fmz_A Internalin; leucine ric 100.0 1.4E-34 4.6E-39 316.0 26.0 306 35-381 41-346 (347)
286 3dzo_A Rhoptry kinase domain; 100.0 2.7E-36 9.2E-41 336.2 11.6 252 559-858 78-364 (413)
287 2pzi_A Probable serine/threoni 100.0 6.9E-36 2.4E-40 354.6 15.6 246 559-864 80-328 (681)
288 1ogq_A PGIP-2, polygalacturona 100.0 2.6E-35 8.9E-40 315.7 16.9 256 225-482 51-310 (313)
289 3oja_B Anopheles plasmodium-re 100.0 7.5E-35 2.6E-39 341.1 22.3 310 37-382 50-359 (597)
290 3m2w_A MAP kinase-activated pr 100.0 3.5E-35 1.2E-39 313.3 16.4 237 558-858 16-257 (299)
291 2vuw_A Serine/threonine-protei 100.0 2.5E-35 8.7E-40 320.0 11.5 246 558-856 19-329 (336)
292 2ft3_A Biglycan; proteoglycan, 100.0 1.9E-33 6.6E-38 304.5 21.8 288 39-354 34-330 (332)
293 2ft3_A Biglycan; proteoglycan, 100.0 7.9E-33 2.7E-37 299.7 26.3 268 169-451 54-331 (332)
294 1xku_A Decorin; proteoglycan, 100.0 1.9E-32 6.5E-37 296.5 27.2 248 196-451 73-330 (330)
295 1ogq_A PGIP-2, polygalacturona 100.0 6.9E-34 2.4E-38 304.6 14.5 253 199-455 50-306 (313)
296 1xku_A Decorin; proteoglycan, 100.0 1.4E-32 4.8E-37 297.6 24.1 289 39-354 32-329 (330)
297 1z7x_W Ribonuclease inhibitor; 100.0 5.8E-37 2E-41 348.8 -14.6 356 14-405 3-411 (461)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.2E-35 4.1E-40 337.9 -6.0 364 39-455 4-413 (461)
299 2z66_A Variable lymphocyte rec 100.0 1.3E-31 4.5E-36 286.7 16.7 277 202-483 10-294 (306)
300 3zyj_A Leucine-rich repeat-con 100.0 1.3E-30 4.5E-35 293.7 23.0 254 200-459 44-298 (440)
301 3zyi_A Leucine-rich repeat-con 100.0 1.8E-30 6.2E-35 293.6 22.9 253 201-459 56-309 (452)
302 1ozn_A Reticulon 4 receptor; N 100.0 2.8E-30 9.6E-35 273.2 20.0 254 202-483 14-268 (285)
303 2z80_A TOLL-like receptor 2, v 100.0 4.3E-31 1.5E-35 288.7 13.6 281 167-457 29-318 (353)
304 3zyj_A Leucine-rich repeat-con 100.0 9E-30 3.1E-34 286.9 22.9 254 225-483 44-299 (440)
305 3zyi_A Leucine-rich repeat-con 100.0 1.4E-29 4.9E-34 286.3 23.1 254 225-483 55-310 (452)
306 2z80_A TOLL-like receptor 2, v 100.0 1.6E-30 5.3E-35 284.3 14.6 277 200-480 32-318 (353)
307 2z66_A Variable lymphocyte rec 100.0 7.1E-30 2.4E-34 273.2 17.3 234 225-459 53-293 (306)
308 3oja_A Leucine-rich immune mol 100.0 7.8E-31 2.7E-35 298.0 8.7 244 225-482 35-288 (487)
309 1ozn_A Reticulon 4 receptor; N 100.0 2.3E-29 7.8E-34 266.2 19.4 254 171-459 13-267 (285)
310 3ogk_B Coronatine-insensitive 100.0 2.8E-32 9.7E-37 320.5 -6.0 423 10-450 69-548 (592)
311 4fcg_A Uncharacterized protein 100.0 1.5E-28 5E-33 264.7 20.3 225 225-454 82-315 (328)
312 4fcg_A Uncharacterized protein 100.0 3.3E-28 1.1E-32 261.9 20.6 225 199-429 81-314 (328)
313 3g06_A SSPH2 (leucine-rich rep 100.0 1.1E-27 3.6E-32 277.3 25.7 129 271-416 180-308 (622)
314 3g06_A SSPH2 (leucine-rich rep 100.0 2.5E-27 8.6E-32 274.2 28.1 221 199-457 81-301 (622)
315 1wwl_A Monocyte differentiatio 100.0 6.5E-30 2.2E-34 273.8 6.0 202 247-454 94-310 (312)
316 3ogk_B Coronatine-insensitive 100.0 5.8E-31 2E-35 309.3 -4.6 398 12-426 110-548 (592)
317 1wwl_A Monocyte differentiatio 100.0 4.2E-29 1.4E-33 267.5 8.5 249 165-430 39-310 (312)
318 3o53_A Protein LRIM1, AGAP0063 100.0 6E-29 2E-33 267.0 8.1 237 197-448 32-270 (317)
319 3o53_A Protein LRIM1, AGAP0063 99.9 6.5E-29 2.2E-33 266.7 6.8 259 200-473 11-272 (317)
320 3oja_A Leucine-rich immune mol 99.9 3.4E-28 1.1E-32 276.3 11.6 247 198-459 33-288 (487)
321 2z62_A TOLL-like receptor 4, v 99.9 7.9E-27 2.7E-31 245.4 21.0 210 249-459 29-243 (276)
322 4azs_A Methyltransferase WBDD; 99.9 6.1E-29 2.1E-33 286.1 4.9 186 567-774 242-438 (569)
323 2p1m_B Transport inhibitor res 99.9 2.4E-30 8.3E-35 304.2 -10.1 428 10-452 62-543 (594)
324 2o6q_A Variable lymphocyte rec 99.9 1.3E-25 4.6E-30 235.0 23.1 206 250-458 18-223 (270)
325 1p9a_G Platelet glycoprotein I 99.9 6E-26 2.1E-30 239.6 20.5 206 244-456 6-211 (290)
326 2z62_A TOLL-like receptor 4, v 99.9 5.2E-26 1.8E-30 239.2 18.9 226 203-433 11-241 (276)
327 1p9a_G Platelet glycoprotein I 99.9 1.7E-25 5.8E-30 236.1 20.1 207 268-480 6-212 (290)
328 2o6q_A Variable lymphocyte rec 99.9 4.5E-25 1.5E-29 231.0 22.7 206 272-480 16-222 (270)
329 2p1m_B Transport inhibitor res 99.9 1.6E-29 5.4E-34 297.3 -14.4 404 11-428 102-543 (594)
330 3rfs_A Internalin B, repeat mo 99.9 3.2E-25 1.1E-29 232.3 13.4 221 226-459 21-241 (272)
331 3rfs_A Internalin B, repeat mo 99.9 3.8E-25 1.3E-29 231.8 13.5 206 225-441 42-247 (272)
332 3en9_A Glycoprotease, O-sialog 99.9 2E-25 6.9E-30 255.4 6.9 189 560-775 337-539 (540)
333 4glp_A Monocyte differentiatio 99.9 5.3E-24 1.8E-28 227.7 15.6 224 199-429 64-307 (310)
334 3goz_A Leucine-rich repeat-con 99.9 2.8E-25 9.6E-30 243.1 4.8 251 204-455 3-299 (362)
335 2xwt_C Thyrotropin receptor; s 99.9 5.6E-24 1.9E-28 218.4 14.0 199 225-450 32-236 (239)
336 3goz_A Leucine-rich repeat-con 99.9 1.5E-25 5.1E-30 245.3 2.3 262 18-287 2-299 (362)
337 2xwt_C Thyrotropin receptor; s 99.9 5.6E-24 1.9E-28 218.4 13.2 197 199-402 31-236 (239)
338 1h6u_A Internalin H; cell adhe 99.9 1.1E-23 3.7E-28 224.7 15.1 189 225-429 42-230 (308)
339 3m19_A Variable lymphocyte rec 99.9 7.1E-23 2.4E-27 211.7 20.4 158 298-455 37-194 (251)
340 3m19_A Variable lymphocyte rec 99.9 5.9E-23 2E-27 212.3 19.6 181 248-431 14-194 (251)
341 4glp_A Monocyte differentiatio 99.9 5.5E-24 1.9E-28 227.6 10.9 224 225-454 65-308 (310)
342 2ca6_A RAN GTPase-activating p 99.9 2.4E-25 8.1E-30 246.3 -1.7 232 226-457 34-320 (386)
343 2ca6_A RAN GTPase-activating p 99.9 1.8E-25 6.2E-30 247.2 -4.6 270 160-449 23-339 (386)
344 4ay9_X Follicle-stimulating ho 99.9 6.2E-23 2.1E-27 223.3 15.3 239 202-449 12-255 (350)
345 1h6u_A Internalin H; cell adhe 99.9 1.7E-22 5.7E-27 215.5 17.9 210 228-455 23-232 (308)
346 4ay9_X Follicle-stimulating ho 99.9 4.6E-23 1.6E-27 224.3 13.6 250 226-483 11-265 (350)
347 2ast_B S-phase kinase-associat 99.9 5.1E-24 1.8E-28 231.0 6.0 252 200-459 48-312 (336)
348 2ast_B S-phase kinase-associat 99.9 1E-23 3.4E-28 228.7 4.5 236 165-412 64-313 (336)
349 1zar_A RIO2 kinase; serine kin 99.9 1.3E-22 4.5E-27 212.5 12.0 150 554-747 85-252 (282)
350 2v70_A SLIT-2, SLIT homolog 2 99.9 2E-21 6.8E-26 196.0 13.0 182 299-483 14-196 (220)
351 2v9t_B SLIT homolog 2 protein 99.9 2.4E-21 8.1E-26 195.5 13.4 182 299-483 14-195 (220)
352 2o6s_A Variable lymphocyte rec 99.8 6.5E-21 2.2E-25 190.9 15.4 151 202-356 10-160 (208)
353 2o6s_A Variable lymphocyte rec 99.8 1.3E-20 4.6E-25 188.6 17.4 178 227-414 10-187 (208)
354 3cvr_A Invasion plasmid antige 99.8 1.2E-20 4.2E-25 215.4 17.0 188 225-440 60-254 (571)
355 2xot_A Amphoterin-induced prot 99.8 9E-21 3.1E-25 207.0 13.9 180 275-457 21-206 (361)
356 1h6t_A Internalin B; cell adhe 99.8 1E-20 3.4E-25 199.8 13.3 171 270-454 44-214 (291)
357 2xot_A Amphoterin-induced prot 99.8 1.2E-20 4.3E-25 205.9 12.7 181 298-481 20-207 (361)
358 1m9s_A Internalin B; cell inva 99.8 1.4E-20 4.9E-25 217.5 13.4 190 226-431 23-212 (605)
359 3cvr_A Invasion plasmid antige 99.8 6.4E-20 2.2E-24 209.5 18.5 188 243-458 49-248 (571)
360 1h6t_A Internalin B; cell adhe 99.8 3.7E-20 1.3E-24 195.4 13.4 171 246-430 44-214 (291)
361 2v9t_B SLIT homolog 2 protein 99.8 7.3E-20 2.5E-24 184.5 14.5 153 275-430 14-166 (220)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-19 4E-24 183.0 14.0 156 275-433 14-170 (220)
363 1m9s_A Internalin B; cell inva 99.8 6.6E-20 2.3E-24 211.9 13.5 196 246-457 19-214 (605)
364 3e6j_A Variable lymphocyte rec 99.8 3.4E-19 1.2E-23 180.9 16.3 155 299-457 22-176 (229)
365 3e6j_A Variable lymphocyte rec 99.8 1.4E-18 4.7E-23 176.4 19.1 156 274-433 21-176 (229)
366 1dce_A Protein (RAB geranylger 99.8 6.2E-21 2.1E-25 219.3 -1.1 204 35-303 346-567 (567)
367 1w8a_A SLIT protein; signaling 99.8 4.3E-19 1.5E-23 174.8 11.2 157 323-482 11-168 (192)
368 1xeu_A Internalin C; cellular 99.8 2.9E-19 9.8E-24 185.5 10.0 167 248-429 19-185 (263)
369 1xeu_A Internalin C; cellular 99.8 2.3E-19 8E-24 186.2 8.8 167 226-407 21-187 (263)
370 1zth_A RIO1 serine protein kin 99.8 2.1E-19 7.3E-24 185.9 8.4 138 560-721 48-219 (258)
371 4ezg_A Putative uncharacterize 99.8 1.2E-18 4.1E-23 172.6 13.4 153 245-405 41-194 (197)
372 1dce_A Protein (RAB geranylger 99.8 3E-21 1E-25 221.9 -6.8 217 196-447 346-567 (567)
373 4ezg_A Putative uncharacterize 99.8 9.7E-19 3.3E-23 173.2 11.4 152 269-428 41-193 (197)
374 4b8c_D Glucose-repressible alc 99.8 2.8E-19 9.4E-24 212.3 7.5 196 199-426 173-369 (727)
375 3sb4_A Hypothetical leucine ri 99.8 1.1E-18 3.6E-23 188.1 10.2 132 4-144 13-157 (329)
376 1w8a_A SLIT protein; signaling 99.7 5.8E-18 2E-22 166.7 13.5 178 299-482 11-189 (192)
377 2wfh_A SLIT homolog 2 protein 99.7 6.8E-18 2.3E-22 166.1 12.6 159 323-485 13-171 (193)
378 3sb4_A Hypothetical leucine ri 99.7 1.1E-18 3.7E-23 188.1 7.0 196 247-446 100-327 (329)
379 4b8c_D Glucose-repressible alc 99.7 1.2E-18 4.2E-23 206.7 6.5 192 14-258 173-369 (727)
380 2wfh_A SLIT homolog 2 protein 99.7 1.3E-16 4.3E-21 157.0 12.6 133 347-483 13-146 (193)
381 4fdw_A Leucine rich hypothetic 99.7 6.8E-16 2.3E-20 169.6 18.7 241 200-452 136-382 (401)
382 2ell_A Acidic leucine-rich nuc 99.7 1.7E-16 5.9E-21 152.6 11.4 134 320-455 24-162 (168)
383 2ell_A Acidic leucine-rich nuc 99.7 2.7E-16 9.4E-21 151.2 11.9 132 272-405 24-160 (168)
384 2o6r_A Variable lymphocyte rec 99.7 5.8E-16 2E-20 150.3 13.2 133 322-457 9-141 (177)
385 4fs7_A Uncharacterized protein 99.6 3.5E-15 1.2E-19 164.8 19.5 334 26-421 59-393 (394)
386 2je0_A Acidic leucine-rich nuc 99.6 3.9E-16 1.3E-20 146.8 9.8 127 320-448 17-148 (149)
387 4fdw_A Leucine rich hypothetic 99.6 6.6E-15 2.3E-19 161.7 20.2 244 199-456 113-361 (401)
388 2je0_A Acidic leucine-rich nuc 99.6 4.4E-16 1.5E-20 146.4 9.1 127 272-400 17-148 (149)
389 4fs7_A Uncharacterized protein 99.6 7.6E-15 2.6E-19 162.1 19.6 335 50-445 59-393 (394)
390 4gyi_A RIO2 kinase; protein ki 99.6 5E-16 1.7E-20 165.9 9.6 137 560-722 96-266 (397)
391 2o6r_A Variable lymphocyte rec 99.6 2.9E-15 9.9E-20 145.4 14.0 133 298-433 9-141 (177)
392 1a9n_A U2A', U2A'; complex (nu 99.6 3.1E-15 1.1E-19 144.9 9.4 132 268-405 15-153 (176)
393 1a9n_A U2A', U2A'; complex (nu 99.6 3.4E-15 1.2E-19 144.7 8.6 135 316-454 15-154 (176)
394 1ds9_A Outer arm dynein; leuci 99.5 3.1E-17 1.1E-21 162.5 -7.8 133 315-454 43-186 (198)
395 3g39_A Variable lymphocyte rec 99.5 2.4E-14 8.2E-19 137.5 11.4 110 346-458 11-120 (170)
396 1ds9_A Outer arm dynein; leuci 99.5 9.4E-17 3.2E-21 159.0 -7.6 64 267-333 43-106 (198)
397 2r9u_A Variable lymphocyte rec 99.5 5.6E-14 1.9E-18 135.4 11.5 108 347-457 15-122 (174)
398 3g39_A Variable lymphocyte rec 99.5 3E-13 1E-17 129.8 12.0 108 322-432 11-118 (170)
399 4gt6_A Cell surface protein; l 99.4 3.1E-12 1.1E-16 141.1 20.3 133 289-428 258-390 (394)
400 2r9u_A Variable lymphocyte rec 99.4 3.9E-13 1.3E-17 129.4 11.2 106 323-431 15-120 (174)
401 4gt6_A Cell surface protein; l 99.4 2.5E-11 8.4E-16 133.9 23.0 336 26-405 51-391 (394)
402 3un9_A NLR family member X1; l 99.4 9.3E-15 3.2E-19 158.9 -5.9 66 388-453 207-283 (372)
403 3un9_A NLR family member X1; l 99.4 9.7E-15 3.3E-19 158.8 -5.9 89 367-455 154-254 (372)
404 2ifg_A High affinity nerve gro 99.4 9.7E-13 3.3E-17 142.7 9.4 103 324-429 12-116 (347)
405 2ifg_A High affinity nerve gro 99.3 2.8E-12 9.4E-17 139.1 10.4 131 348-481 12-146 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.3 1.3E-11 4.4E-16 128.0 11.4 147 555-720 10-213 (263)
407 4h09_A Hypothetical leucine ri 99.2 1.1E-09 3.6E-14 120.1 21.9 316 33-393 41-357 (379)
408 4h09_A Hypothetical leucine ri 99.1 1.9E-09 6.6E-14 118.1 20.9 317 57-418 41-358 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 5.6E-10 1.9E-14 115.5 8.9 138 559-720 20-214 (264)
410 3sg8_A APH(2'')-ID; antibiotic 99.0 2.5E-10 8.6E-15 120.9 5.9 193 564-776 25-289 (304)
411 2ra8_A Uncharacterized protein 99.0 1.8E-10 6.3E-15 123.8 3.0 83 367-451 251-341 (362)
412 2ra8_A Uncharacterized protein 98.9 2.3E-10 7.8E-15 123.1 3.0 65 390-454 250-321 (362)
413 3dxp_A Putative acyl-COA dehyd 98.9 3.5E-09 1.2E-13 115.0 10.7 145 563-720 42-248 (359)
414 3r70_A Aminoglycoside phosphot 98.6 3E-07 1E-11 97.8 13.3 137 560-721 38-238 (320)
415 4gkh_A Aminoglycoside 3'-phosp 98.5 6.4E-07 2.2E-11 92.8 12.3 137 565-720 30-223 (272)
416 1io0_A Tropomodulin; LRR prote 98.5 2.2E-08 7.6E-13 97.0 0.7 12 271-282 35-46 (185)
417 1io0_A Tropomodulin; LRR prote 98.5 1.5E-08 5E-13 98.3 -0.9 13 440-452 151-163 (185)
418 3rw6_A Nuclear RNA export fact 98.4 7.1E-08 2.4E-12 98.0 1.6 66 317-384 167-236 (267)
419 3rw6_A Nuclear RNA export fact 98.4 2.8E-08 9.5E-13 101.1 -1.4 105 34-141 137-257 (267)
420 3d1u_A Putative fructosamine-3 98.4 1.7E-06 5.7E-11 90.0 11.8 76 563-648 19-97 (288)
421 3tdw_A Gentamicin resistance p 98.3 2.1E-06 7E-11 90.5 12.0 137 564-720 24-224 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 7.3E-06 2.5E-10 88.3 12.1 150 561-721 43-244 (362)
423 3e4g_A ATP synthase subunit S, 98.1 6.9E-07 2.3E-11 84.0 0.9 92 30-121 53-150 (176)
424 2olc_A MTR kinase, methylthior 98.0 1.9E-05 6.4E-10 86.7 11.2 76 564-646 35-120 (397)
425 3ats_A Putative uncharacterize 98.0 1.4E-05 4.6E-10 86.4 9.6 84 564-649 25-121 (357)
426 3e4g_A ATP synthase subunit S, 98.0 1.7E-06 5.9E-11 81.3 1.5 84 344-427 61-150 (176)
427 3f7w_A Putative fructosamine-3 97.8 8.5E-05 2.9E-09 77.4 10.8 79 560-648 16-97 (288)
428 2q83_A YTAA protein; 2635576, 97.7 0.00012 4.1E-09 78.4 11.2 150 565-720 38-252 (346)
429 3jr1_A Putative fructosamine-3 97.6 0.00035 1.2E-08 73.0 11.8 142 564-716 41-232 (312)
430 3rfe_A Platelet glycoprotein I 97.6 7.7E-05 2.6E-09 66.9 5.6 62 395-458 11-73 (130)
431 1pgv_A TMD-1, tropomodulin TMD 97.4 4E-05 1.4E-09 73.4 1.8 10 272-281 41-50 (197)
432 2pyw_A Uncharacterized protein 97.4 0.00056 1.9E-08 75.4 11.0 76 690-770 232-312 (420)
433 1pgv_A TMD-1, tropomodulin TMD 97.4 7.4E-05 2.5E-09 71.6 3.1 87 365-451 67-168 (197)
434 3dxq_A Choline/ethanolamine ki 97.2 0.00098 3.3E-08 69.7 10.4 74 561-648 20-95 (301)
435 3rfe_A Platelet glycoprotein I 97.2 0.00039 1.3E-08 62.2 6.1 63 419-483 11-75 (130)
436 2ppq_A HSK, HK, homoserine kin 97.2 0.0013 4.6E-08 69.4 10.8 169 548-720 6-217 (322)
437 2qg7_A Ethanolamine kinase PV0 97.1 0.0013 4.6E-08 72.6 9.9 75 564-648 113-188 (458)
438 3feg_A Choline/ethanolamine ki 97.1 0.0014 4.8E-08 70.4 9.5 147 564-720 55-254 (379)
439 1nw1_A Choline kinase (49.2 KD 97.1 0.0011 3.9E-08 72.8 9.0 74 564-648 78-159 (429)
440 1zyl_A Hypothetical protein YI 97.1 0.0035 1.2E-07 66.3 12.5 168 547-720 9-223 (328)
441 3csv_A Aminoglycoside phosphot 96.9 0.007 2.4E-07 64.2 12.7 145 565-720 24-217 (333)
442 3c5i_A Choline kinase; choline 96.5 0.0045 1.5E-07 66.7 8.0 74 565-648 39-121 (369)
443 3i1a_A Spectinomycin phosphotr 96.3 0.0068 2.3E-07 64.4 8.1 32 690-721 206-237 (339)
444 3f2s_A CK, chetk-alpha, cholin 96.2 0.016 5.5E-07 62.4 10.2 147 565-720 58-280 (401)
445 2yle_A Protein spire homolog 1 96.1 0.019 6.6E-07 55.0 9.1 99 646-769 33-131 (229)
446 3mes_A Choline kinase; malaria 95.0 0.073 2.5E-06 57.9 9.9 75 564-648 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 94.8 0.058 2E-06 58.6 8.4 30 691-720 245-280 (401)
448 2ks1_B Epidermal growth factor 81.5 0.36 1.2E-05 32.9 0.4 18 515-532 24-41 (44)
449 2jwa_A Receptor tyrosine-prote 81.0 0.36 1.2E-05 32.7 0.3 17 516-532 25-41 (44)
450 4ann_A ESSB; membrane protein, 77.4 5.9 0.0002 37.9 7.6 87 664-780 77-163 (215)
451 2l2t_A Receptor tyrosine-prote 76.9 0.42 1.4E-05 32.5 -0.3 17 517-533 25-41 (44)
452 3cxl_A N-chimerin; SH2, RHO-GA 73.2 0.42 1.4E-05 52.6 -1.8 62 562-626 145-214 (463)
453 4ano_A ESSB; membrane protein, 65.5 16 0.00056 35.0 7.7 84 664-778 81-166 (219)
454 2lz0_A Uncharacterized protein 51.1 32 0.0011 28.3 6.2 44 381-425 9-52 (100)
455 2lz0_A Uncharacterized protein 49.3 36 0.0012 28.0 6.2 45 236-281 8-52 (100)
456 3ls8_A Phosphatidylinositol 3- 34.6 5.3E+02 0.018 28.8 15.2 46 667-719 454-501 (614)
457 1cja_A Protein (actin-fragmin 32.0 1.3E+02 0.0045 30.7 8.3 145 563-720 73-237 (342)
458 2x6h_A GH13170P, VPS34, phosph 26.8 1.3E+02 0.0044 34.4 7.9 45 668-719 529-575 (696)
459 1iij_A ERBB-2 receptor protein 24.6 5 0.00017 25.6 -2.2 10 520-529 25-34 (35)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.8e-60 Score=569.03 Aligned_cols=469 Identities=34% Similarity=0.534 Sum_probs=372.8
Q ss_pred ccccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccc
Q 002883 3 QGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSEL 82 (871)
Q Consensus 3 ~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 82 (871)
.+.+|. +.++++|++|+|++|++++.+|.+|+++++|++|+|++|++++.+|.. .+++|++|+|++|++++.+|..+
T Consensus 213 ~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~ 289 (768)
T 3rgz_A 213 STGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFL 289 (768)
T ss_dssp CSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCS
T ss_pred CCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHH
Confidence 344554 666666666666666666666666666666666666666666555544 56666666666666666666666
Q ss_pred ccc-ccccccccccccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCC
Q 002883 83 GLL-KQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSI 161 (871)
Q Consensus 83 ~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~l 161 (871)
..+ ++|++|++++|.+++.+|..+.++++|++|++++|.+.+.+|...+..+++|++|++++|.+++ .+
T Consensus 290 ~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~----------~~ 359 (768)
T 3rgz_A 290 SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSG----------EL 359 (768)
T ss_dssp CTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEE----------CC
T ss_pred HhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCc----------cc
Confidence 554 7777777777777766777777777777777777777666666644567777777777777664 34
Q ss_pred CccccCCC-cccEEecccccCCCCCCCCccccccccC--CCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCC
Q 002883 162 PEDLGKLK-NLIRLNFARNNLGTGKGNDLRFLDSLVN--CTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISG 238 (871)
Q Consensus 162 p~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~l~~--l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~ 238 (871)
|+.+..++ +|++|++++|++.... +..+.. +++|++|++++|.+++.+|..+..+ ++|++|++++|++++
T Consensus 360 p~~l~~l~~~L~~L~Ls~N~l~~~~------~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~ 432 (768)
T 3rgz_A 360 PESLTNLSASLLTLDLSSNNFSGPI------LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC-SELVSLHLSFNYLSG 432 (768)
T ss_dssp CTTHHHHTTTCSEEECCSSEEEEEC------CTTTTCSTTCCCCEEECCSSEEEEECCGGGGGC-TTCCEEECCSSEEES
T ss_pred cHHHHhhhcCCcEEEccCCCcCCCc------ChhhhhcccCCccEEECCCCccccccCHHHhcC-CCCCEEECcCCcccC
Confidence 55566665 7888888888775321 222333 6778888888888888888888877 468888888888888
Q ss_pred CCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccC
Q 002883 239 TIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGN 318 (871)
Q Consensus 239 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 318 (871)
..|..+..+++|+.|++++|.+++..|..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++.+|..|+.
T Consensus 433 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 512 (768)
T 3rgz_A 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 512 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGG
T ss_pred cccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhc
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccc-----------------------------------
Q 002883 319 CLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLE----------------------------------- 363 (871)
Q Consensus 319 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~----------------------------------- 363 (871)
+++|+.|+|++|++++.+|..+..+++|+.|++++|++++.+|..
T Consensus 513 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 888888888888888888888888888888888888887666643
Q ss_pred -----------------------------------cCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccC
Q 002883 364 -----------------------------------VGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPI 408 (871)
Q Consensus 364 -----------------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 408 (871)
++.+++|+.|+|++|++++.+|..+..+++|+.|+|++|++++.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 344678999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCCcccccccceeccCCCCCccCCCccccccc
Q 002883 409 HSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGGSPELHLHSC 488 (871)
Q Consensus 409 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~~~~~~~~~c 488 (871)
|..|+.+++|+.|||++|++++.+|..+..+++|++||+++|+++|.+|..+.|..+....+.|||+.||.|. ..|
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l----~~C 748 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL----PRC 748 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS----CCC
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC----cCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999764 367
Q ss_pred ccCCCCc
Q 002883 489 RSRGSRK 495 (871)
Q Consensus 489 ~~~~~~~ 495 (871)
....+..
T Consensus 749 ~~~~~~~ 755 (768)
T 3rgz_A 749 DPSNADG 755 (768)
T ss_dssp CSCC---
T ss_pred CCCccCC
Confidence 6554443
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.6e-56 Score=534.82 Aligned_cols=469 Identities=33% Similarity=0.505 Sum_probs=317.3
Q ss_pred cccccCc--cCcCCCCCCEEecCCCcccccCCccc-cCCCcCceeeCCCCcccccCCcc---c-----------------
Q 002883 2 LQGEIPA--NITHCSELRILDLVVNKLEGNIPSEL-GNLFKLVGLGLTGNNYTGSIPQS---L----------------- 58 (871)
Q Consensus 2 ~~~~~p~--~~~~l~~L~~L~l~~n~i~~~~~~~~-~~l~~L~~L~L~~n~l~~~~p~~---~----------------- 58 (871)
+.|++|. .|+++++|++|||++|.+++..|..+ .++++|++|+|++|++++..|.. +
T Consensus 112 l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~ 191 (768)
T 3rgz_A 112 LSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKIS 191 (768)
T ss_dssp EEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEE
T ss_pred CCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCccc
Confidence 4566776 77777777777777777776666654 56666666666666666554443 2
Q ss_pred -----cCCcccceeeccCccccCCCCccccccccccccccccccccCCCCccccccCCCceeeeeccccccccccccccC
Q 002883 59 -----SNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFT 133 (871)
Q Consensus 59 -----~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 133 (871)
..+++|++|+|++|.+++.+|. |+.+++|++|++++|.+++.+|..+.++++|++|++++|.+.+.+|.. .
T Consensus 192 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~---~ 267 (768)
T 3rgz_A 192 GDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL---P 267 (768)
T ss_dssp SCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC---C
T ss_pred ccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc---c
Confidence 4556666666666666655555 777777777777777777667777777777777777777776555543 5
Q ss_pred CCCccEEEccCccCCCCCCccCcCC---------------CCCCccccCCCcccEEecccccCC-CCCCCCccccccccC
Q 002883 134 LPNIRVLLLGSNWFTGEIPPSISNA---------------SSIPEDLGKLKNLIRLNFARNNLG-TGKGNDLRFLDSLVN 197 (871)
Q Consensus 134 l~~L~~L~l~~n~i~~~~p~~~~~~---------------~~lp~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~ 197 (871)
+++|++|+|++|.+++.+|..+... ..+|..|+.+++|++|++++|++. .++ ...+..
T Consensus 268 l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip------~~~l~~ 341 (768)
T 3rgz_A 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP------MDTLLK 341 (768)
T ss_dssp CTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECC------HHHHTT
T ss_pred cCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCC------HHHHhc
Confidence 6677777777777776666665432 146677788888888888888775 322 123666
Q ss_pred CCcccEEEccCCcCcccCChhhhhccccccEEEccC--------------------------CccCCCCCCCCCCccccc
Q 002883 198 CTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSA--------------------------NRISGTIPTGVGNLKNLI 251 (871)
Q Consensus 198 l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~--------------------------n~i~~~~~~~~~~l~~L~ 251 (871)
+++|++|+|++|++++.+|..+..+..+|++|++++ |++++..|..+.++++|+
T Consensus 342 l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 421 (768)
T 3rgz_A 342 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELV 421 (768)
T ss_dssp CTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCC
T ss_pred CCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCC
Confidence 777777777777777777777666543345554444 444445555666666666
Q ss_pred eeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCc
Q 002883 252 LIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNN 331 (871)
Q Consensus 252 ~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 331 (871)
.|++++|.+++..|..|..+++|+.|+|++|++.+..|..+..+++|++|+|++|++++.+|..+.++++|++|+|++|+
T Consensus 422 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 501 (768)
T 3rgz_A 422 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501 (768)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCc
Confidence 66666666666666666666666666666666666666666666777777777777766666667777777777777777
Q ss_pred CCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchh----------------------
Q 002883 332 LSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLA---------------------- 389 (871)
Q Consensus 332 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---------------------- 389 (871)
+++.+|..+..+++|++|++++|++++.+|..++.+++|+.|++++|++++.+|..+.
T Consensus 502 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (768)
T 3rgz_A 502 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 581 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECC
T ss_pred cCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccc
Confidence 7766777777777777777777777666677777777777777777776655554332
Q ss_pred ------------------------------------------------cccCCceeeecCCcccccCccccCCCCCCCEE
Q 002883 390 ------------------------------------------------SCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDL 421 (871)
Q Consensus 390 ------------------------------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 421 (871)
.+++|+.|+|++|++++.+|..++.++.|+.|
T Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 661 (768)
T 3rgz_A 582 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFIL 661 (768)
T ss_dssp SCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEE
T ss_pred cccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEE
Confidence 23556777777777777777777777777777
Q ss_pred eCCCCcCCCCCcccccccccccEEecCCCcCcccCCCC-cccccccceeccCCCCCccCCC
Q 002883 422 DLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE-GVFKNVRAVSIIGNNKLCGGSP 481 (871)
Q Consensus 422 ~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~C~~~~ 481 (871)
+|++|++++.+|..+..+++|+.|||++|++++.+|.. ..+..++.+++.+|+. .|..|
T Consensus 662 ~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l-~g~iP 721 (768)
T 3rgz_A 662 NLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL-SGPIP 721 (768)
T ss_dssp ECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE-EEECC
T ss_pred eCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc-cccCC
Confidence 77777777777777777777777777777777777654 4556677777777654 34444
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.5e-54 Score=511.52 Aligned_cols=464 Identities=22% Similarity=0.232 Sum_probs=340.6
Q ss_pred cCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCcccccc
Q 002883 6 IPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLL 85 (871)
Q Consensus 6 ~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 85 (871)
+|..+.. .++.|||++|+|++..|.+|+++++|++|+|++|++++..|++|+++++|++|+|++|++++..|..|+++
T Consensus 27 iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 104 (606)
T 3t6q_A 27 IPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGP 104 (606)
T ss_dssp CCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSC
T ss_pred CcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhccc
Confidence 4444432 45555555555555555555555555555555555555555555555555555555555554445555555
Q ss_pred ccccccccccccccCCCCccccccCCCceeeeeccccccc-cccccccCCCCccEEEccCccCC----------------
Q 002883 86 KQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGE-IPHYVGFTLPNIRVLLLGSNWFT---------------- 148 (871)
Q Consensus 86 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~~l~~L~~L~l~~n~i~---------------- 148 (871)
++|++|++++|++++..+..+.++++|++|++++|.+.+. +|... .+++|++|++++|.++
T Consensus 105 ~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l 182 (606)
T 3t6q_A 105 KALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGF--PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNL 182 (606)
T ss_dssp TTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTC--CCTTCCEEECCSSCCCEECHHHHHTTTTCCSE
T ss_pred ccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCccccc--CCcccCEEEcccCcccccChhhhhhhccccee
Confidence 5555555555555543344555555555555555555421 12222 2555555555555554
Q ss_pred ----------CCCCccCcCC--------------------------------------CCC-CccccCCC--cccEEecc
Q 002883 149 ----------GEIPPSISNA--------------------------------------SSI-PEDLGKLK--NLIRLNFA 177 (871)
Q Consensus 149 ----------~~~p~~~~~~--------------------------------------~~l-p~~~~~l~--~L~~L~l~ 177 (871)
+..|..+... ..+ +..+..+. +|+.|+++
T Consensus 183 ~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~ 262 (606)
T 3t6q_A 183 SLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQ 262 (606)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECT
T ss_pred EEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEee
Confidence 3333222110 000 00111111 56666666
Q ss_pred cccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeeccc
Q 002883 178 RNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEV 257 (871)
Q Consensus 178 ~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 257 (871)
+|.++.++. ..+..+++|++|++++|.++ .+|..+..+ ++|++|++++|++++..|..+..+++|+.|++++
T Consensus 263 ~n~l~~~~~------~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 334 (606)
T 3t6q_A 263 KHYFFNISS------NTFHCFSGLQELDLTATHLS-ELPSGLVGL-STLKKLVLSANKFENLCQISASNFPSLTHLSIKG 334 (606)
T ss_dssp TCCCSSCCT------TTTTTCTTCSEEECTTSCCS-CCCSSCCSC-TTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCS
T ss_pred cCccCccCH------HHhccccCCCEEeccCCccC-CCChhhccc-ccCCEEECccCCcCcCchhhhhccCcCCEEECCC
Confidence 666665443 33667888999999999998 678877776 4699999999999887788899999999999999
Q ss_pred ccccccCCc-cccCCCCCcEEEccCCCCCCCC--CcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCC
Q 002883 258 NLLTGSIPT-SVGYLLKLQVLSLFGNKISGEI--PSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSG 334 (871)
Q Consensus 258 N~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 334 (871)
|.+.+..+. .+..+++|++|++++|++++.. +..+..+++|++|++++|++.+..|..|..+++|+.|++++|++++
T Consensus 335 n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 414 (606)
T 3t6q_A 335 NTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKV 414 (606)
T ss_dssp CSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEEC
T ss_pred CCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCC
Confidence 988855544 5889999999999999998655 7789999999999999999998888999999999999999999987
Q ss_pred CCcc-cccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCC---CccchhcccCCceeeecCCcccccCcc
Q 002883 335 TIPR-EVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGE---IPTSLASCVGLEYLNFSDNSFQGPIHS 410 (871)
Q Consensus 335 ~~~~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~~ 410 (871)
..+. .+..+++|+.|++++|.+++..|..+..+++|++|++++|++++. .+..+..+++|++|+|++|++++..|.
T Consensus 415 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 494 (606)
T 3t6q_A 415 KDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQH 494 (606)
T ss_dssp CTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTT
T ss_pred cccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChh
Confidence 6654 488999999999999999988888999999999999999999862 346789999999999999999999999
Q ss_pred ccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCC-cccccccceeccCCCCCccCCCc
Q 002883 411 GFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE-GVFKNVRAVSIIGNNKLCGGSPE 482 (871)
Q Consensus 411 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~C~~~~~ 482 (871)
.|..+++|++|+|++|++++..|..+..+++| .|++++|++++.+|.. ..+++++.+++.+|||.|+|...
T Consensus 495 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 495 AFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp TTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH
T ss_pred hhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH
Confidence 99999999999999999999999999999999 9999999999877753 56788999999999999999753
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2e-53 Score=508.97 Aligned_cols=474 Identities=23% Similarity=0.212 Sum_probs=340.5
Q ss_pred cccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCcccc
Q 002883 4 GEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELG 83 (871)
Q Consensus 4 ~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 83 (871)
+..|..|.++++|++|+|++|.+++..|++|+++++|++|+|++|++++..+.+|+++++|++|+|++|++++..|..|+
T Consensus 39 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 118 (680)
T 1ziw_A 39 RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFV 118 (680)
T ss_dssp CCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTT
T ss_pred CcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHcc
Confidence 33344577778888888888888777777788888888888888888755555688888888888888888755567788
Q ss_pred ccccccccccccccccCCCCccccccCCCceeeeeccccccccccccc-cCCCCccEEEccCccCCCCCCccCcCCCC--
Q 002883 84 LLKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVG-FTLPNIRVLLLGSNWFTGEIPPSISNASS-- 160 (871)
Q Consensus 84 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~~l~~L~~L~l~~n~i~~~~p~~~~~~~~-- 160 (871)
++++|++|++++|.+++..|..+.++++|++|++++|.+.+..+..+. ..+++|+.|++++|.+++..|..+.....
T Consensus 119 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 198 (680)
T 1ziw_A 119 KQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLF 198 (680)
T ss_dssp TCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEEC
T ss_pred ccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhh
Confidence 888888888888888777777777788888888888877644443321 24577888888888777666654432211
Q ss_pred ---------------------------------------CCccccCCCc--ccEEecccccCCCCCCCCccccccccCCC
Q 002883 161 ---------------------------------------IPEDLGKLKN--LIRLNFARNNLGTGKGNDLRFLDSLVNCT 199 (871)
Q Consensus 161 ---------------------------------------lp~~~~~l~~--L~~L~l~~n~l~~~~~~~~~~~~~l~~l~ 199 (871)
.|..|..++. |++|++++|+++.+++ ..+..++
T Consensus 199 ~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~------~~~~~l~ 272 (680)
T 1ziw_A 199 GLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN------DSFAWLP 272 (680)
T ss_dssp EEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECT------TTTTTCT
T ss_pred hhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCc------ccccCcc
Confidence 1334444443 7777777777665432 3355666
Q ss_pred cccEEEccCCcCcccCChhhhhc--------------------------------cccccEEEccCCccCCCCCCCCCCc
Q 002883 200 FLEVVSLSSNSLSGVLPNSIANF--------------------------------SSHLIYLYMSANRISGTIPTGVGNL 247 (871)
Q Consensus 200 ~L~~L~L~~n~l~~~~~~~~~~~--------------------------------~~~L~~L~L~~n~i~~~~~~~~~~l 247 (871)
+|++|+|++|++++..|..+..+ .++|++|++++|++++..+..|.++
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 352 (680)
T 1ziw_A 273 QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGL 352 (680)
T ss_dssp TCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTC
T ss_pred cccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccc
Confidence 77777777777665544433221 1346666666666666656666665
Q ss_pred cccceeeccc----------------------------ccccccCCccccCCCCCcEEEccCCCCCCCCC-cccCCCccc
Q 002883 248 KNLILIAMEV----------------------------NLLTGSIPTSVGYLLKLQVLSLFGNKISGEIP-SSLGNLIFL 298 (871)
Q Consensus 248 ~~L~~L~l~~----------------------------N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L 298 (871)
++|++|++++ |.+++..|.+|..+++|+.|+|++|++.+.+| ..|.++++|
T Consensus 353 ~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 432 (680)
T 1ziw_A 353 INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENI 432 (680)
T ss_dssp TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTC
T ss_pred cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccc
Confidence 5555555544 34444455566666666666666666654333 456666666
Q ss_pred cEEEccCccccccCcccccCCCCCCEEecCCCcCC--CCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCC
Q 002883 299 TEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLS--GTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLS 376 (871)
Q Consensus 299 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~ 376 (871)
++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|..+++|+.|++++|++++..+..|..+++|++|+|+
T Consensus 433 ~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls 512 (680)
T 1ziw_A 433 FEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQ 512 (680)
T ss_dssp CEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCC
Confidence 66777766666666666777777777777777765 4567788889999999999999997777788999999999999
Q ss_pred CCcCCCCCc--------cchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecC
Q 002883 377 ENKLSGEIP--------TSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLS 448 (871)
Q Consensus 377 ~N~l~~~~~--------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~ 448 (871)
+|++++..+ ..|..+++|++|+|++|+++.+++..|.++++|+.|+|++|++++..+..|..+++|+.|+|+
T Consensus 513 ~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~ 592 (680)
T 1ziw_A 513 HNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQ 592 (680)
T ss_dssp SSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECC
Confidence 999885422 237888999999999999997777789999999999999999998878888999999999999
Q ss_pred CCcCcccCCCC-c-ccccccceeccCCCCCccCCC-cc
Q 002883 449 FNNLEGEVPSE-G-VFKNVRAVSIIGNNKLCGGSP-EL 483 (871)
Q Consensus 449 ~N~l~~~~~~~-~-~~~~l~~l~l~~N~~~C~~~~-~~ 483 (871)
+|++++..+.. . .+++++.+++.+|||.|+|.. .|
T Consensus 593 ~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~ 630 (680)
T 1ziw_A 593 KNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAW 630 (680)
T ss_dssp TSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSS
T ss_pred CCcCCccChhHhcccccccCEEEccCCCcccCCccHHH
Confidence 99999876653 2 578899999999999999985 44
No 5
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-53 Score=515.32 Aligned_cols=459 Identities=20% Similarity=0.172 Sum_probs=305.5
Q ss_pred CCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccC-CccccCCcccceeeccCccccCCCCccccccccccccc
Q 002883 14 SELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSI-PQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQ 92 (871)
Q Consensus 14 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 92 (871)
++|+.|||++|.|++..|.+|+++++|++|+|++|...+.+ |++|+++++|++|+|++|.+++..|+.|+++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 57788888888887777778888888888888888544344 67788888888888888888766777888888888888
Q ss_pred cccccccCCCCcc--ccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCC------------
Q 002883 93 VSANYLTGSIPIQ--LFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNA------------ 158 (871)
Q Consensus 93 l~~n~l~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~------------ 158 (871)
|++|.+++.+|.. +.++++|++|+|++|.+.+..+...+..+++|++|+|++|.+++..|..+..+
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~ 183 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCC
Confidence 8888887655554 77788888888888877755454444577888888888887775444333211
Q ss_pred ----CCCCccccCCCc------ccEEecccccCCCCCCCCccc------------------------------cccccC-
Q 002883 159 ----SSIPEDLGKLKN------LIRLNFARNNLGTGKGNDLRF------------------------------LDSLVN- 197 (871)
Q Consensus 159 ----~~lp~~~~~l~~------L~~L~l~~n~l~~~~~~~~~~------------------------------~~~l~~- 197 (871)
...|..++.+.+ |+.|++++|.+.......+.. ...+..
T Consensus 184 n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l 263 (844)
T 3j0a_A 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263 (844)
T ss_dssp SBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTT
T ss_pred CccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhcc
Confidence 011222222222 555555555544321111000 000111
Q ss_pred -CCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcE
Q 002883 198 -CTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQV 276 (871)
Q Consensus 198 -l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 276 (871)
.++|++|+|++|.+++..|..+..+ ++|+.|+|++|+|++..|..|.++++|+.|+|++|.+++..+..|..+++|+.
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLNSRVFETL-KDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTSCCCEEECTTCCCCEECSCCSSSC-CCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred ccCCccEEECCCCcccccChhhhhcC-CCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 1455556666665554444444444 34666666666665555555555666666666666655555555555666666
Q ss_pred EEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcc------------------
Q 002883 277 LSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPR------------------ 338 (871)
Q Consensus 277 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~------------------ 338 (871)
|+|++|++....+..|..+++|++|+|++|.+++. + .+++|+.|++++|+++ .+|.
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~N~l~-~l~~~~~~l~~L~ls~N~l~~l 416 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSGNKLV-TLPKINLTANLIHLSENRLENL 416 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEESCCCC-CCCCCCTTCCEEECCSCCCCSS
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCCCCcc-cccccccccceeecccCccccC
Confidence 66666665555555555556666666666555521 1 1333333333333333 1111
Q ss_pred ----cccCCCCCcEEeccCCCCCCCCcc-ccCCCCCCCEEeCCCCcCC-----CCCccchhcccCCceeeecCCcccccC
Q 002883 339 ----EVIGLSSFVLLDLSRNHLSGPIPL-EVGRLKGIQQLDLSENKLS-----GEIPTSLASCVGLEYLNFSDNSFQGPI 408 (871)
Q Consensus 339 ----~~~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~ 408 (871)
.+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|..+++|++|+|++|+|++.+
T Consensus 417 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 496 (844)
T 3j0a_A 417 DILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLP 496 (844)
T ss_dssp TTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCC
T ss_pred chhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccC
Confidence 234678888888888888754432 4566888999999999887 344567889999999999999999999
Q ss_pred ccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCCcccccccceeccCCCCCccCCCcc
Q 002883 409 HSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 409 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
+..|.++++|+.|+|++|+|++..+..+. ++|+.|+|++|++++..|.. +.++..+++.+|||.|+|...+
T Consensus 497 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~~~ 567 (844)
T 3j0a_A 497 PGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECELST 567 (844)
T ss_dssp TTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSCCS
T ss_pred hhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccccHH
Confidence 99999999999999999999987777776 89999999999999988754 7789999999999999997644
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.9e-53 Score=496.06 Aligned_cols=467 Identities=19% Similarity=0.177 Sum_probs=384.6
Q ss_pred ccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccc
Q 002883 5 EIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGL 84 (871)
Q Consensus 5 ~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 84 (871)
++|..+. +.|+.|+|++|++++..+.+|+++++|++|+|++|++++..|++|+++++|++|+|++|++++..|..|++
T Consensus 25 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~ 102 (606)
T 3vq2_A 25 KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSG 102 (606)
T ss_dssp SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTT
T ss_pred cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCC
Confidence 4666665 67889999999998777888889999999999999988777888888999999999999888777888889
Q ss_pred cccccccccccccccCCCCccccccCCCceeeeecccccc-ccccccccCCCCccEEEccCccCCCCCCccCcCCC----
Q 002883 85 LKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVG-EIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNAS---- 159 (871)
Q Consensus 85 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~---- 159 (871)
+++|++|++++|++++..+..++++++|++|++++|.+.+ .+|..+. .+++|+.|++++|.+++..|..+..+.
T Consensus 103 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 181 (606)
T 3vq2_A 103 LTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFS-NLTNLVHVDLSYNYIQTITVNDLQFLRENPQ 181 (606)
T ss_dssp CTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGG-TCTTCCEEECCSSCCCEECTTTTHHHHHCTT
T ss_pred cccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHh-hcCCCCEEEccCCcceecChhhhhhhhcccc
Confidence 9999999999999886666788889999999999988875 4676655 788999999999988865554432221
Q ss_pred -------------CCCccccCCCcccEEecccccCCC-------------------------------------------
Q 002883 160 -------------SIPEDLGKLKNLIRLNFARNNLGT------------------------------------------- 183 (871)
Q Consensus 160 -------------~lp~~~~~l~~L~~L~l~~n~l~~------------------------------------------- 183 (871)
.+|.......+|++|++++|.+..
T Consensus 182 ~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l 261 (606)
T 3vq2_A 182 VNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDV 261 (606)
T ss_dssp CCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGS
T ss_pred ccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhc
Confidence 233333333467777777776530
Q ss_pred --------CCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeec
Q 002883 184 --------GKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAM 255 (871)
Q Consensus 184 --------~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 255 (871)
...........+..+++|+.|++++|.++ .+| .+..+ ++|++|++++|++. .+| .+ .+++|+.|++
T Consensus 262 ~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~-~l~-~l~~~-~~L~~L~l~~n~l~-~lp-~~-~l~~L~~L~l 335 (606)
T 3vq2_A 262 TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIK-YLE-DVPKH-FKWQSLSIIRCQLK-QFP-TL-DLPFLKSLTL 335 (606)
T ss_dssp EEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCC-CCC-CCCTT-CCCSEEEEESCCCS-SCC-CC-CCSSCCEEEE
T ss_pred cHhheeccccccccccccccccCCCCCEEEecCccch-hhh-hcccc-ccCCEEEcccccCc-ccc-cC-CCCccceeec
Confidence 00000001122566788888888888887 455 55555 46999999999994 666 45 8999999999
Q ss_pred ccccccccCCccccCCCCCcEEEccCCCCCCC--CCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCC
Q 002883 256 EVNLLTGSIPTSVGYLLKLQVLSLFGNKISGE--IPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLS 333 (871)
Q Consensus 256 ~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 333 (871)
++|...+.. .+..+++|++|++++|++++. .+..+..+++|++|+|++|.+++ +|..|..+++|+.|++++|++.
T Consensus 336 ~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~ 412 (606)
T 3vq2_A 336 TMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLK 412 (606)
T ss_dssp ESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEE
T ss_pred cCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccC
Confidence 999655333 677899999999999999865 37889999999999999999984 6688999999999999999999
Q ss_pred CCCc-ccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCC-CCccchhcccCCceeeecCCcccccCccc
Q 002883 334 GTIP-REVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSG-EIPTSLASCVGLEYLNFSDNSFQGPIHSG 411 (871)
Q Consensus 334 ~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 411 (871)
+..+ ..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++ ..|..|..+++|++|+|++|++++..+..
T Consensus 413 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 492 (606)
T 3vq2_A 413 RVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGV 492 (606)
T ss_dssp STTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred CccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhh
Confidence 7777 689999999999999999998889999999999999999999997 47889999999999999999999999999
Q ss_pred cCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCCcccc-cccceeccCCCCCccCCCcc
Q 002883 412 FSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFK-NVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 412 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~~-~l~~l~l~~N~~~C~~~~~~ 483 (871)
|..+++|++|++++|++++..|..+..+++|++|++++|+++..++....++ +++.+++.+|||.|+|+..|
T Consensus 493 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 493 FDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp TTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred hcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 9999999999999999999889999999999999999999997666555565 59999999999999998754
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.1e-51 Score=484.78 Aligned_cols=453 Identities=21% Similarity=0.201 Sum_probs=306.1
Q ss_pred CCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCcccccccccccccccc
Q 002883 16 LRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSA 95 (871)
Q Consensus 16 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~ 95 (871)
-+.++.++..++ .+|..+.. ++++|+|++|+|++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 14 ~~~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 90 (606)
T 3t6q_A 14 NKTYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTA 90 (606)
T ss_dssp TTEEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CceEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCC
Confidence 457999999998 78887765 799999999999988899999999999999999999988899999999999999999
Q ss_pred ccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCC-------------CC-
Q 002883 96 NYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNAS-------------SI- 161 (871)
Q Consensus 96 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~-------------~l- 161 (871)
|++++..|..|.++++|++|++++|.+. .++...+..+++|++|++++|.+++..++.+.... .+
T Consensus 91 n~l~~~~~~~~~~l~~L~~L~L~~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 169 (606)
T 3t6q_A 91 NPLIFMAETALSGPKALKHLFFIQTGIS-SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLS 169 (606)
T ss_dssp CCCSEECTTTTSSCTTCCEEECTTSCCS-CGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEEC
T ss_pred CcccccChhhhcccccccEeeccccCcc-cCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccC
Confidence 9999888999999999999999999998 45444456999999999999999853222211111 11
Q ss_pred CccccCCCccc--EEecccccCCCCCCCCcccc-------------------------------------------cccc
Q 002883 162 PEDLGKLKNLI--RLNFARNNLGTGKGNDLRFL-------------------------------------------DSLV 196 (871)
Q Consensus 162 p~~~~~l~~L~--~L~l~~n~l~~~~~~~~~~~-------------------------------------------~~l~ 196 (871)
|+.++.+++|+ .|++++|+++.+++..+... ..+.
T Consensus 170 ~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~ 249 (606)
T 3t6q_A 170 KEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFE 249 (606)
T ss_dssp HHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGG
T ss_pred hhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhc
Confidence 23344555555 55555555554433222110 0000
Q ss_pred CC--CcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCC
Q 002883 197 NC--TFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKL 274 (871)
Q Consensus 197 ~l--~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 274 (871)
.+ .+|++|++++|.+++..+..+..+ ++|++|++++|+++ .+|..+.++++|++|++++|.+++..|..+..+++|
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 327 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNISSNTFHCF-SGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCCTTTTTTC-TTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTC
T ss_pred hhhcCceeEEEeecCccCccCHHHhccc-cCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcC
Confidence 00 045566666666654444444444 35666666666666 455666666666666666666665556666666666
Q ss_pred cEEEccCCCCCCCCC-cccCCCccccEEEccCccccccC--cccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEec
Q 002883 275 QVLSLFGNKISGEIP-SSLGNLIFLTEVDLQGNSIRGSI--PSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDL 351 (871)
Q Consensus 275 ~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 351 (871)
++|++++|.+.+..+ ..+..+++|++|++++|++++.. +..+..+++|++|++++|++++..|..+..+++|++|++
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp SEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred CEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 666666666654333 33666666666666666666444 556666666777777777666666666666667777777
Q ss_pred cCCCCCCCCcc-ccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCccccc---CccccCCCCCCCEEeCCCCc
Q 002883 352 SRNHLSGPIPL-EVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGP---IHSGFSSLKGLQDLDLSRNN 427 (871)
Q Consensus 352 s~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~l~~N~ 427 (871)
++|.+++..+. .+..+++|+.|++++|.+++..|..+..+++|++|++++|++++. .+..+..+++|++|++++|+
T Consensus 408 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp TTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSC
T ss_pred CCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCc
Confidence 77766654443 366666777777777776666666666667777777777766642 22456666677777777777
Q ss_pred CCCCCcccccccccccEEecCCCcCcccCCCC-cccccccceeccCCCC
Q 002883 428 FSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE-GVFKNVRAVSIIGNNK 475 (871)
Q Consensus 428 l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 475 (871)
+++..|..+..+++|++|+|++|++++..|.. ..++.+ .+++.+|..
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l 535 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHI 535 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCC
T ss_pred cCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcc
Confidence 76666666666777777777777776655432 334445 566666654
No 8
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.9e-52 Score=438.83 Aligned_cols=266 Identities=25% Similarity=0.383 Sum_probs=213.1
Q ss_pred cCCCCCceeeccccceEEEEEEC-----CCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 559 EGFSSANLIGIGGYGYVYKGILG-----TEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
++|.+.+.||+|+||+||+|++. .+++.||||+++.......+.|.+|++++++++|||||+++++|.+.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~----- 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG----- 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC-----
Confidence 46888999999999999999974 35788999999876666678899999999999999999999999765
Q ss_pred ceeeEEEeccCCCCHHHHhhccccc------ccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDE------QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE 707 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 707 (871)
+..|+|||||++|+|.++++..+.. ......+++.++..++.|||.||+|||++ +||||||||+|||++.+
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 5689999999999999999765321 11233699999999999999999999999 99999999999999999
Q ss_pred CceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHH
Q 002883 708 MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHK 786 (871)
Q Consensus 708 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~ 786 (871)
+.+||+|||+|+...... .........||+.|||||++.++.|+.++|||||||++|||+| |+.||........ ...
T Consensus 165 ~~~Ki~DFGla~~~~~~~-~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~-~~~ 242 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTD-YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-IEC 242 (299)
T ss_dssp GCEEECCCSCHHHHTGGG-CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHH
T ss_pred CcEEECCcccceecCCCC-ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHH
Confidence 999999999998764322 1222333568999999999999999999999999999999999 9999986433221 111
Q ss_pred HhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 787 YAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
......++. . ..++.++.+++.+||+.||++|||++|+.+.|+++.+.
T Consensus 243 i~~~~~~~~-p------------------------------~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 243 ITQGRVLQR-P------------------------------RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHTCCCCC-C------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHcCCCCCC-C------------------------------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 111111100 0 12334677999999999999999999999999988764
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.1e-51 Score=439.11 Aligned_cols=250 Identities=22% Similarity=0.314 Sum_probs=209.9
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeE
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL 638 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 638 (871)
..|++.+.||+|+||+||+|++..+|+.||||+++.......+.+.+|+++++.++|||||+++++|.+. +.+|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-----~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET-----TEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----CEEEE
Confidence 5699999999999999999999999999999999766655667789999999999999999999999876 67999
Q ss_pred EEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccc
Q 002883 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS 718 (871)
Q Consensus 639 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 718 (871)
|||||+||+|.+++... .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|
T Consensus 149 vmEy~~gg~L~~~l~~~--------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla 217 (346)
T 4fih_A 149 VMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 217 (346)
T ss_dssp EECCCTTEEHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEeCCCCCcHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCc
Confidence 99999999999999753 489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchhhh
Q 002883 719 RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAE 798 (871)
Q Consensus 719 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 798 (871)
+.+.... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||....... ....+....+....
T Consensus 218 ~~~~~~~---~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~~~~~~~~- 291 (346)
T 4fih_A 218 AQVSKEV---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRDNLPPRLK- 291 (346)
T ss_dssp EECCSSS---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSSCCCCS-
T ss_pred eecCCCC---CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHcCCCCCCC-
Confidence 9875432 22344689999999999999999999999999999999999999997543221 11111111111100
Q ss_pred hcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 799 IIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
....+..++.+++.+||+.||++|||++|+++
T Consensus 292 ---------------------------~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 292 ---------------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ---------------------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---------------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00123346779999999999999999999986
No 10
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.8e-52 Score=434.72 Aligned_cols=261 Identities=25% Similarity=0.414 Sum_probs=202.9
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||+||+|++.. .||||+++... ....+.|.+|++++++++|||||++++++.+ +.
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~~ 105 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN 105 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------Ce
Confidence 4578889999999999999999753 59999986433 3345789999999999999999999998743 34
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.|+|||||++|+|.+++..... .+++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||+||
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~~~------~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DF 176 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQET------KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDF 176 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCC------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCC
T ss_pred EEEEEEcCCCCCHHHHHhhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeec
Confidence 7999999999999999976432 599999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA---LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
|+|+...... .........||+.|||||++. .++|+.++|||||||++|||+||+.||.+................
T Consensus 177 Gla~~~~~~~-~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~ 255 (307)
T 3omv_A 177 GLATVKSRWS-GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA 255 (307)
T ss_dssp SSCBC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCC
T ss_pred cCceecccCC-cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCC
Confidence 9998765432 122234467999999999875 346899999999999999999999999754322221111111111
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK 864 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~ 864 (871)
++...+ ....++.++.+++.+||+.||++|||+.||++.|+.++.
T Consensus 256 ~p~~~~---------------------------~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 256 SPDLSK---------------------------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CCCSTT---------------------------SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred CCCccc---------------------------ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 111111 111334567899999999999999999999999988764
No 11
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.3e-49 Score=475.86 Aligned_cols=460 Identities=20% Similarity=0.223 Sum_probs=301.3
Q ss_pred ccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccc
Q 002883 5 EIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGL 84 (871)
Q Consensus 5 ~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 84 (871)
++|..+. ++++.|+|++|+|++..+.+|+++++|++|+|++|++++..|+.|+++++|++|+|++|.+++..+..|++
T Consensus 18 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 95 (680)
T 1ziw_A 18 QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAF 95 (680)
T ss_dssp SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhcc
Confidence 5787776 68999999999999888889999999999999999999989999999999999999999999555557999
Q ss_pred cccccccccccccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCcc
Q 002883 85 LKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPED 164 (871)
Q Consensus 85 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~ 164 (871)
+++|++|+|++|++++..|..|.++++|++|++++|.+.+..|..+ ..+++|++|++++|.+++..|..+.
T Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~-------- 166 (680)
T 1ziw_A 96 CTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ-VQLENLQELLLSNNKIQALKSEELD-------- 166 (680)
T ss_dssp CTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSS-SCCTTCCEEECCSSCCCCBCHHHHG--------
T ss_pred CCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhh-cccccCCEEEccCCcccccCHHHhh--------
Confidence 9999999999999997777889999999999999999986655554 4899999999999999843322111
Q ss_pred ccCCCcccEEecccccCCCCCCCCcccccccc---------------------CCCcccEEEccCCcCcccCChhhhhcc
Q 002883 165 LGKLKNLIRLNFARNNLGTGKGNDLRFLDSLV---------------------NCTFLEVVSLSSNSLSGVLPNSIANFS 223 (871)
Q Consensus 165 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~---------------------~l~~L~~L~L~~n~l~~~~~~~~~~~~ 223 (871)
+..+++|++|++++|+++.+.+..+..+..+. ..++|+.|++++|.+++..|..+..+.
T Consensus 167 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~ 246 (680)
T 1ziw_A 167 IFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLK 246 (680)
T ss_dssp GGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGG
T ss_pred ccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccC
Confidence 22456777777777777766554332222111 113445555555555444444444332
Q ss_pred -ccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCc---------------------------------ccc
Q 002883 224 -SHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPT---------------------------------SVG 269 (871)
Q Consensus 224 -~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~---------------------------------~~~ 269 (871)
++|+.|++++|++++..|..|..+++|++|++++|.+++..|. .|.
T Consensus 247 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~ 326 (680)
T 1ziw_A 247 WTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQ 326 (680)
T ss_dssp GSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTT
T ss_pred cCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcc
Confidence 1255555555555444444455555555555555544433333 344
Q ss_pred CCCCCcEEEccCCCCCCCCCcccCCCccccEEEccC----------------------------ccccccCcccccCCCC
Q 002883 270 YLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQG----------------------------NSIRGSIPSALGNCLQ 321 (871)
Q Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~----------------------------N~i~~~~~~~~~~l~~ 321 (871)
.+++|++|++++|++++..+..|.++++|++|++++ |++++..|.+|..+++
T Consensus 327 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~ 406 (680)
T 1ziw_A 327 WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGH 406 (680)
T ss_dssp TCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCC
Confidence 455555556666666655555555555555444443 3444444556666666
Q ss_pred CCEEecCCCcCCCCCc-ccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCC--CCCccchhcccCCceee
Q 002883 322 LQKLDLSDNNLSGTIP-REVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLS--GEIPTSLASCVGLEYLN 398 (871)
Q Consensus 322 L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~ 398 (871)
|+.|++++|.+++.+| ..+.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|..+++|+.|+
T Consensus 407 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~ 486 (680)
T 1ziw_A 407 LEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILD 486 (680)
T ss_dssp CCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEE
T ss_pred CCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEE
Confidence 6666666666654333 45666666666666666665444455555555555555555554 34556666666777777
Q ss_pred ecCCcccccCccccCCCCCCCEEeCCCCcCCCCCc--------ccccccccccEEecCCCcCcccCCC-Cccccccccee
Q 002883 399 FSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIP--------MFLNTFRFLQKLNLSFNNLEGEVPS-EGVFKNVRAVS 469 (871)
Q Consensus 399 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~--------~~~~~~~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~ 469 (871)
|++|+|+++.+..|.++++|++|++++|++++..+ ..+..+++|+.|+|++|+++..++. ...++.++.++
T Consensus 487 Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 566 (680)
T 1ziw_A 487 LSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIID 566 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeE
Confidence 77777766666666666677777777776664311 2356666666666666666644332 23455666666
Q ss_pred ccCCCC
Q 002883 470 IIGNNK 475 (871)
Q Consensus 470 l~~N~~ 475 (871)
+.+|..
T Consensus 567 Ls~N~l 572 (680)
T 1ziw_A 567 LGLNNL 572 (680)
T ss_dssp CCSSCC
T ss_pred CCCCCC
Confidence 666643
No 12
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=5.2e-52 Score=442.32 Aligned_cols=252 Identities=19% Similarity=0.277 Sum_probs=203.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++|||||++++++.+. +.
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-----~~ 97 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN-----GS 97 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC-----CE
Confidence 368999999999999999999999999999999996543 23456789999999999999999999998765 67
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.|+|||||+||+|.+++...+.. .+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 98 ~yiVmEy~~gg~L~~~i~~~~~~-----~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DF 169 (350)
T 4b9d_A 98 LYIVMDYCEGGDLFKRINAQKGV-----LFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDF 169 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHTTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECST
T ss_pred EEEEEeCCCCCcHHHHHHHcCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEccc
Confidence 89999999999999999765422 579999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
|+|+..... .......+||+.|||||++.+..|+.++||||+||++|||+||+.||....... .+........++.
T Consensus 170 Gla~~~~~~---~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~~~~~ 245 (350)
T 4b9d_A 170 GIARVLNST---VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-LVLKIISGSFPPV 245 (350)
T ss_dssp TEESCCCHH---HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCCCC
T ss_pred ccceeecCC---cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCCCCCC
Confidence 999875421 122344679999999999999999999999999999999999999998543222 1122222211110
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
. ..++.++.+++.+||+.||++|||++|+++
T Consensus 246 -~------------------------------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 246 -S------------------------------LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp -C------------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -C------------------------------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 012345779999999999999999999986
No 13
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.7e-51 Score=439.19 Aligned_cols=266 Identities=26% Similarity=0.378 Sum_probs=206.8
Q ss_pred cCCCCCceeeccccceEEEEEEC-----CCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 559 EGFSSANLIGIGGYGYVYKGILG-----TEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
++|.+.+.||+|+||+||+|++. .+++.||||+++.......+.|.+|++++++++|||||+++++|.+.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~----- 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG----- 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----
Confidence 45777899999999999999975 35788999999876666678899999999999999999999999765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccc--------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQ--------NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~ 705 (871)
...|+|||||++|+|.++++...... ....++++.+++.|+.|||.||+|||+. +||||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 56899999999999999998654211 1233699999999999999999999999 999999999999999
Q ss_pred CCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhH
Q 002883 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSL 784 (871)
Q Consensus 706 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~ 784 (871)
.++.+||+|||+|+...... .........||+.|||||++.+..|+.++|||||||++|||+| |+.||........
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~-~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~-- 269 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTD-YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-- 269 (329)
T ss_dssp TTTEEEECCCC-----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH--
T ss_pred CCCcEEEcccccceeccCCC-cceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH--
Confidence 99999999999998765432 1222334579999999999999999999999999999999999 9999986433221
Q ss_pred HHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883 785 HKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK 864 (871)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~ 864 (871)
........+.... ..+++++.+++.+||+.||++|||++||++.|+.+.+
T Consensus 270 ~~~i~~g~~~~~p------------------------------~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 270 IDCITQGRELERP------------------------------RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHHHHTCCCCCC------------------------------TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCc------------------------------ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 1111111100000 0233467799999999999999999999999998865
Q ss_pred H
Q 002883 865 M 865 (871)
Q Consensus 865 ~ 865 (871)
.
T Consensus 320 ~ 320 (329)
T 4aoj_A 320 A 320 (329)
T ss_dssp S
T ss_pred C
Confidence 3
No 14
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.7e-51 Score=426.11 Aligned_cols=251 Identities=25% Similarity=0.385 Sum_probs=201.4
Q ss_pred CC-CCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 560 GF-SSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 560 ~y-~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
+| ++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++|||||+++++|.+. ..+...+
T Consensus 26 r~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~~~~~ 104 (290)
T 3fpq_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCI 104 (290)
T ss_dssp SEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-ETTEEEE
T ss_pred ceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec-cCCCcEE
Confidence 44 56778999999999999999999999999996432 33456789999999999999999999998653 2233668
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCceeeCC-CCceEEe
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS--IVHCDLKPSNVLLDN-EMVAHVG 713 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~-~~~~kl~ 713 (871)
|+|||||+||+|.+++.... .+++..+..++.||+.||+|||++ + ||||||||+|||++. ++.+||+
T Consensus 105 ~lvmEy~~gg~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~ 174 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKRFK-------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIG 174 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEEC
T ss_pred EEEEeCCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEE
Confidence 99999999999999998654 689999999999999999999998 6 999999999999974 7999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||+|+.... ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+................|
T Consensus 175 DFGla~~~~~-----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~ 248 (290)
T 3fpq_A 175 DLGLATLKRA-----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP 248 (290)
T ss_dssp CTTGGGGCCT-----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC
T ss_pred eCcCCEeCCC-----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC
Confidence 9999986432 22334679999999998764 69999999999999999999999997533222222221111111
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...... ..+++.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~------------------------------~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 249 ASFDKV------------------------------AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGGGGC------------------------------CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCcc------------------------------CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111111 1234678999999999999999999986
No 15
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.5e-51 Score=435.24 Aligned_cols=260 Identities=22% Similarity=0.206 Sum_probs=208.8
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.+.|++.++||+|+||+||+|++..+++.||||+++.... ..+|+.+++.++|||||++++++.+. ..+|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~-----~~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREG-----PWVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEEC-----CEEE
Confidence 3468888999999999999999999999999999975432 24699999999999999999998765 6789
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-ceEEeecc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM-VAHVGDFG 716 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg 716 (871)
+|||||+||+|.++++..+ .+++.++..++.||+.||+|||++ +||||||||+|||++.++ .+||+|||
T Consensus 127 ivmEy~~gg~L~~~l~~~~-------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFG 196 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQMG-------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFG 196 (336)
T ss_dssp EEECCCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCT
T ss_pred EEEeccCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCC
Confidence 9999999999999998654 599999999999999999999999 999999999999999988 69999999
Q ss_pred cceecCCCCCCcc--ccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 717 LSRLLHDNSPDQT--STSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 717 ~a~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
+|+.+........ .....+||+.|||||++.+..|+.++||||+||++|||+||+.||........ .........+
T Consensus 197 la~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~~~- 274 (336)
T 4g3f_A 197 HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEPPP- 274 (336)
T ss_dssp TCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSCCG-
T ss_pred CCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCCCC-
Confidence 9998764322211 22345799999999999999999999999999999999999999975432221 1111111100
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQ 867 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~~ 867 (871)
..+ ....++..+.+++.+||+.||++||||.|+++.|..+.....
T Consensus 275 -~~~---------------------------~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 275 -IRE---------------------------IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp -GGG---------------------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -chh---------------------------cCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 000 001234467789999999999999999999999988765543
No 16
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.5e-51 Score=431.24 Aligned_cols=249 Identities=20% Similarity=0.300 Sum_probs=208.2
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
++|++.+.||+|+||+||+|++..+++.||||+++.. .....+.+.+|++++++++|||||+++++|.+. ..
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-----~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD-----EK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----SE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----CE
Confidence 5799999999999999999999999999999999643 233457889999999999999999999998775 67
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.|+|||||+||+|.++++..+ .+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 107 ~yivmEy~~gG~L~~~i~~~~-------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DF 176 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKIG-------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDF 176 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEecCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEc
Confidence 999999999999999998754 599999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
|+|+.+.... ........+||+.|||||++.+..|+.++||||+||++|||+||+.||....... ...........
T Consensus 177 Gla~~~~~~~-~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i~~~~~~-- 252 (311)
T 4aw0_A 177 GTAKVLSPES-KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL-IFAKIIKLEYD-- 252 (311)
T ss_dssp TTCEECCTTT-TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCC--
T ss_pred CCceecCCCC-CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCC--
Confidence 9999875432 2223445689999999999999999999999999999999999999997543221 11111111110
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAI 856 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl 856 (871)
+.+ .+..++.+++.+||+.||++|||++|++
T Consensus 253 ~p~------------------------------~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 253 FPE------------------------------KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CCT------------------------------TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CCc------------------------------ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 000 1223567899999999999999999874
No 17
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.6e-50 Score=474.21 Aligned_cols=441 Identities=22% Similarity=0.178 Sum_probs=374.4
Q ss_pred cccccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCcc
Q 002883 2 LQGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSE 81 (871)
Q Consensus 2 ~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~ 81 (871)
+++..|..|.++++|++|+|++|+|++..|++|+++++|++|+|++|++++..|++|+++++|++|+|++|++++..+..
T Consensus 44 l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~ 123 (606)
T 3vq2_A 44 LKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFP 123 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSC
T ss_pred cCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccc
Confidence 44555668999999999999999999888899999999999999999999878999999999999999999998666688
Q ss_pred ccccccccccccccccccC-CCCccccccCCCceeeeeccccccccccccccCCCCcc----EEEccCccCCCCCCccCc
Q 002883 82 LGLLKQLNMFQVSANYLTG-SIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIR----VLLLGSNWFTGEIPPSIS 156 (871)
Q Consensus 82 ~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~----~L~l~~n~i~~~~p~~~~ 156 (871)
|+++++|++|++++|.+++ .+|..+.++++|++|++++|++.+..|..+. .+.+|+ +|++++|.+++..+..+.
T Consensus 124 ~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~~l~~L~l~~n~l~~~~~~~~~ 202 (606)
T 3vq2_A 124 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQ-FLRENPQVNLSLDMSLNPIDFIQDQAFQ 202 (606)
T ss_dssp CTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTH-HHHHCTTCCCEEECTTCCCCEECTTTTT
T ss_pred cCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhh-hhhccccccceeeccCCCcceeCccccc
Confidence 9999999999999999985 5688899999999999999988754443222 333322 444444444422211110
Q ss_pred ----------------------------------------------------------------------CCC-CCCccc
Q 002883 157 ----------------------------------------------------------------------NAS-SIPEDL 165 (871)
Q Consensus 157 ----------------------------------------------------------------------~~~-~lp~~~ 165 (871)
..+ .+|. +
T Consensus 203 ~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~ 281 (606)
T 3vq2_A 203 GIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-F 281 (606)
T ss_dssp TCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-C
T ss_pred CceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-c
Confidence 011 1222 7
Q ss_pred cCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCC
Q 002883 166 GKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVG 245 (871)
Q Consensus 166 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~ 245 (871)
..+++|+.|++++|.+..++ .+..+++|++|++++|.+. .+| .+ .+ ++|++|++++|+..... .+.
T Consensus 282 ~~l~~L~~L~l~~~~~~~l~--------~l~~~~~L~~L~l~~n~l~-~lp-~~-~l-~~L~~L~l~~n~~~~~~--~~~ 347 (606)
T 3vq2_A 282 HCLANVSAMSLAGVSIKYLE--------DVPKHFKWQSLSIIRCQLK-QFP-TL-DL-PFLKSLTLTMNKGSISF--KKV 347 (606)
T ss_dssp GGGTTCSEEEEESCCCCCCC--------CCCTTCCCSEEEEESCCCS-SCC-CC-CC-SSCCEEEEESCSSCEEC--CCC
T ss_pred ccCCCCCEEEecCccchhhh--------hccccccCCEEEcccccCc-ccc-cC-CC-CccceeeccCCcCccch--hhc
Confidence 78899999999999998744 5678899999999999995 778 44 55 67999999999665333 678
Q ss_pred Cccccceeeccccccccc--CCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCc-ccccCCCCC
Q 002883 246 NLKNLILIAMEVNLLTGS--IPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIP-SALGNCLQL 322 (871)
Q Consensus 246 ~l~~L~~L~l~~N~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L 322 (871)
.+++|+.|++++|.+++. .+..+..+++|++|+|++|.++ ..|..+..+++|++|++++|++.+..+ ..|..+++|
T Consensus 348 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 426 (606)
T 3vq2_A 348 ALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL 426 (606)
T ss_dssp CCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTC
T ss_pred cCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccC
Confidence 999999999999999966 3888999999999999999998 567899999999999999999998877 689999999
Q ss_pred CEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCC-CCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecC
Q 002883 323 QKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSG-PIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSD 401 (871)
Q Consensus 323 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 401 (871)
+.|++++|.+++..|..+.++++|++|++++|.+++ ..|..++.+++|+.|+|++|++++..|..|..+++|++|+|++
T Consensus 427 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 506 (606)
T 3vq2_A 427 LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506 (606)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCC
Confidence 999999999998899999999999999999999986 4788999999999999999999988899999999999999999
Q ss_pred CcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccc-cccEEecCCCcCcccCCCCc
Q 002883 402 NSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFR-FLQKLNLSFNNLEGEVPSEG 460 (871)
Q Consensus 402 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-~L~~L~l~~N~l~~~~~~~~ 460 (871)
|++++..|..|..+++|++|++++|+++ .+|..+..++ +|++|++++|++.|.++..+
T Consensus 507 N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 507 NNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp SCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred CcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 9999999999999999999999999999 6777788887 59999999999999888643
No 18
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7e-50 Score=487.29 Aligned_cols=439 Identities=21% Similarity=0.203 Sum_probs=337.2
Q ss_pred cccccCccCcCCCCCCEEecCCCcccccC-CccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCc
Q 002883 2 LQGEIPANITHCSELRILDLVVNKLEGNI-PSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPS 80 (871)
Q Consensus 2 ~~~~~p~~~~~l~~L~~L~l~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~ 80 (871)
+.+..|..|.++++|++|||++|.+.+.+ |++|+++++|++|+|++|++++..|+.|+++++|++|+|++|.+++..|.
T Consensus 36 i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~ 115 (844)
T 3j0a_A 36 IRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLK 115 (844)
T ss_dssp CCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCST
T ss_pred CCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCccccc
Confidence 34455667777777777777777443333 67777777777777777777766677777777777777777777765554
Q ss_pred c--ccccccccccccccccccCCCC-ccccccCCCceeeeeccccccccccccccCC--CC-------------------
Q 002883 81 E--LGLLKQLNMFQVSANYLTGSIP-IQLFNISSMDYFAVTQNKLVGEIPHYVGFTL--PN------------------- 136 (871)
Q Consensus 81 ~--~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l--~~------------------- 136 (871)
. |+.+++|++|+|++|.+++..+ ..|.++++|++|++++|.+.+..+..+. .+ ++
T Consensus 116 ~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~-~l~~~~L~~L~L~~n~l~~~~~~~~ 194 (844)
T 3j0a_A 116 DGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELE-PLQGKTLSFFSLAANSLYSRVSVDW 194 (844)
T ss_dssp TCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGH-HHHHCSSCCCEECCSBSCCCCCCCC
T ss_pred CccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcc-cccCCccceEECCCCccccccccch
Confidence 4 7777777777777777765443 4567777777777777776644443332 22 33
Q ss_pred -----------ccEEEccCccCCCCCCccCcCCCC--------------------------CCccccC--CCcccEEecc
Q 002883 137 -----------IRVLLLGSNWFTGEIPPSISNASS--------------------------IPEDLGK--LKNLIRLNFA 177 (871)
Q Consensus 137 -----------L~~L~l~~n~i~~~~p~~~~~~~~--------------------------lp~~~~~--l~~L~~L~l~ 177 (871)
|+.|++++|.+++.+|..+..... .+..|.+ .++|+.|+++
T Consensus 195 ~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls 274 (844)
T 3j0a_A 195 GKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLS 274 (844)
T ss_dssp CSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECT
T ss_pred hhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECC
Confidence 556666666555555444332100 0111222 2789999999
Q ss_pred cccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeeccc
Q 002883 178 RNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEV 257 (871)
Q Consensus 178 ~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 257 (871)
+|.+..+.+ ..+..+++|++|+|++|++++..|..+..+ ++|++|+|++|++++..|..|.++++|+.|++++
T Consensus 275 ~n~l~~~~~------~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 347 (844)
T 3j0a_A 275 HGFVFSLNS------RVFETLKDLKVLNLAYNKINKIADEAFYGL-DNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQK 347 (844)
T ss_dssp TCCCCEECS------CCSSSCCCCCEEEEESCCCCEECTTTTTTC-SSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCS
T ss_pred CCcccccCh------hhhhcCCCCCEEECCCCcCCCCChHHhcCC-CCCCEEECCCCCCCccCHHHhcCCCCCCEEECCC
Confidence 999987543 457788999999999999998878888777 5799999999999988899999999999999999
Q ss_pred ccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcc----------------------c
Q 002883 258 NLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPS----------------------A 315 (871)
Q Consensus 258 N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~----------------------~ 315 (871)
|.++...+..|..+++|++|+|++|.+++ ++ .+++|+.|++++|+++. +|. .
T Consensus 348 N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~----~~~~L~~L~l~~N~l~~-l~~~~~~l~~L~ls~N~l~~l~~~~~ 421 (844)
T 3j0a_A 348 NHIAIIQDQTFKFLEKLQTLDLRDNALTT-IH----FIPSIPDIFLSGNKLVT-LPKINLTANLIHLSENRLENLDILYF 421 (844)
T ss_dssp CCCCCCCSSCSCSCCCCCEEEEETCCSCC-CS----SCCSCSEEEEESCCCCC-CCCCCTTCCEEECCSCCCCSSTTHHH
T ss_pred CCCCccChhhhcCCCCCCEEECCCCCCCc-cc----CCCCcchhccCCCCccc-ccccccccceeecccCccccCchhhh
Confidence 99998888889999999999999999984 22 25666666666666652 222 2
Q ss_pred ccCCCCCCEEecCCCcCCCCCcc-cccCCCCCcEEeccCCCCC-----CCCccccCCCCCCCEEeCCCCcCCCCCccchh
Q 002883 316 LGNCLQLQKLDLSDNNLSGTIPR-EVIGLSSFVLLDLSRNHLS-----GPIPLEVGRLKGIQQLDLSENKLSGEIPTSLA 389 (871)
Q Consensus 316 ~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~ls~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 389 (871)
+.++++|+.|+|++|++++..+. .+..+++|+.|++++|.++ +..+..|..+++|+.|+|++|.+++..|..|.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 45789999999999999865443 4567899999999999997 34456788999999999999999998999999
Q ss_pred cccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCC
Q 002883 390 SCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE 459 (871)
Q Consensus 390 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~ 459 (871)
.+++|+.|+|++|+|++.++..+. ++|+.|+|++|+|++..|..+ .+|+.|++++|++.|.|+..
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELS 566 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCC
T ss_pred chhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccH
Confidence 999999999999999988887776 899999999999999888776 47899999999999998754
No 19
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.6e-50 Score=440.87 Aligned_cols=250 Identities=22% Similarity=0.314 Sum_probs=210.2
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeE
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL 638 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 638 (871)
+.|++.+.||+|+||.||+|++..+|+.||||+++.......+.+.+|+++|+.++|||||+++++|.+. +.+|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-----~~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET-----TEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC-----CEEEE
Confidence 5699999999999999999999999999999999766665667789999999999999999999999876 67999
Q ss_pred EEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccc
Q 002883 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS 718 (871)
Q Consensus 639 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 718 (871)
|||||+||+|.++++.. .+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|
T Consensus 226 VmEy~~gG~L~~~i~~~--------~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla 294 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 294 (423)
T ss_dssp EEECCTTEEHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTC
T ss_pred EEeCCCCCcHHHHHhcc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccc
Confidence 99999999999999653 489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchhhh
Q 002883 719 RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAE 798 (871)
Q Consensus 719 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 798 (871)
+.+.... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+..... ....+....+.....
T Consensus 295 ~~~~~~~---~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~~~~~~~~~ 369 (423)
T 4fie_A 295 AQVSKEV---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRDNLPPRLKN 369 (423)
T ss_dssp EECCSSC---CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCCSC
T ss_pred eECCCCC---ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHcCCCCCCcc
Confidence 8875432 22344689999999999999999999999999999999999999997543221 111111111111100
Q ss_pred hcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 799 IIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...+..++.+++.+||+.||++||||+|+++
T Consensus 370 ----------------------------~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 ----------------------------LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ----------------------------TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----------------------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0122345779999999999999999999986
No 20
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-49 Score=464.45 Aligned_cols=450 Identities=20% Similarity=0.198 Sum_probs=378.4
Q ss_pred ccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccc
Q 002883 5 EIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGL 84 (871)
Q Consensus 5 ~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 84 (871)
++|..+. +.++.|||++|+|++..+.+|.++++|++|+|++|++++..|+.|+++++|++|+|++|++++..|..|++
T Consensus 21 ~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (570)
T 2z63_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (570)
T ss_dssp SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcC
Confidence 4676665 47999999999999888889999999999999999999888889999999999999999999777789999
Q ss_pred cccccccccccccccCCCCccccccCCCceeeeecccccc-ccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCc
Q 002883 85 LKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVG-EIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPE 163 (871)
Q Consensus 85 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~ 163 (871)
+++|++|++++|.+++..+..+.++++|++|++++|.+.+ .+|..+. .+++|+.|++++|.+++. .|.
T Consensus 99 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~-~l~~L~~L~l~~n~l~~~----------~~~ 167 (570)
T 2z63_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS-NLTNLEHLDLSSNKIQSI----------YCT 167 (570)
T ss_dssp CTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGG-GCTTCCEEECTTSCCCEE----------CGG
T ss_pred ccccccccccccccccCCCccccccccccEEecCCCccceecChhhhc-ccCCCCEEeCcCCcccee----------cHH
Confidence 9999999999999996556679999999999999999975 4677665 899999999999999832 234
Q ss_pred cccCCCcc----cEEecccccCCCCCCCCccccccccCCCcccEEEccCC------------------------------
Q 002883 164 DLGKLKNL----IRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSN------------------------------ 209 (871)
Q Consensus 164 ~~~~l~~L----~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n------------------------------ 209 (871)
.++.+++| +.|++++|.++.+++..+ .. .+|+.|++++|
T Consensus 168 ~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~------~~-~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~ 240 (570)
T 2z63_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAF------KE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE 240 (570)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTTT------TT-CEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCC
T ss_pred HccchhccchhhhhcccCCCCceecCHHHh------cc-CcceeEecccccccccchhhhhcCccccceeeeccccccCc
Confidence 56777777 788899888877654322 22 25666666665
Q ss_pred ----------------------------cCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeeccccccc
Q 002883 210 ----------------------------SLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLT 261 (871)
Q Consensus 210 ----------------------------~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~ 261 (871)
.+.+..|..+..+ ++|+.|++++|.++ .+|..+..+ +|+.|++++|.++
T Consensus 241 ~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l-~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~ 317 (570)
T 2z63_A 241 GNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCL-TNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG 317 (570)
T ss_dssp SSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGG-TTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS
T ss_pred hhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCc-CcccEEEecCccch-hhhhhhccC-CccEEeeccCccc
Confidence 3344455555555 46889999999888 577778888 8999999999888
Q ss_pred ccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccC--cccccCCCCCCEEecCCCcCCCCCccc
Q 002883 262 GSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSI--PSALGNCLQLQKLDLSDNNLSGTIPRE 339 (871)
Q Consensus 262 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~ 339 (871)
.+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. +..+..+++|++|++++|.+++. +..
T Consensus 318 -~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~ 391 (570)
T 2z63_A 318 -QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSN 391 (570)
T ss_dssp -SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEE
T ss_pred -ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-ccc
Confidence 4444 4678899999999988755544 78899999999999998554 67888999999999999999854 444
Q ss_pred ccCCCCCcEEeccCCCCCCCCc-cccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCccc-ccCccccCCCCC
Q 002883 340 VIGLSSFVLLDLSRNHLSGPIP-LEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQ-GPIHSGFSSLKG 417 (871)
Q Consensus 340 ~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~ 417 (871)
+..+++|+.|++++|.+.+..+ ..+..+++|++|++++|.+++..|..|..+++|++|+|++|+++ +..|..|..+++
T Consensus 392 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~ 471 (570)
T 2z63_A 392 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 471 (570)
T ss_dssp EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccC
Confidence 9999999999999999986655 57889999999999999999888999999999999999999997 568889999999
Q ss_pred CCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCC-cccccccceeccCCCCCccCCCcc
Q 002883 418 LQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE-GVFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 418 L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
|++|++++|++++..|..+..+++|++|++++|++++.++.. ..+++++.+++.+|++.|+|+..+
T Consensus 472 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 472 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 999999999999888999999999999999999999887653 567889999999999999998643
No 21
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-50 Score=418.01 Aligned_cols=247 Identities=23% Similarity=0.332 Sum_probs=191.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++|||||++++++.+. +
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~-----~ 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK-----D 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----C
Confidence 368999999999999999999999999999999996432 23356789999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+ +|+|.+++...+ .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 87 ~~~ivmEy~-~g~L~~~l~~~~-------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~D 155 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIVQRD-------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIAD 155 (275)
T ss_dssp EEEEEEECC-CEEHHHHHHHSC-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECC
T ss_pred EEEEEEeCC-CCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEee
Confidence 789999999 789999997654 699999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
||+|+...+.. .....+||+.|||||++.+..+ ++++||||+||++|+|+||+.||....... ..........+
T Consensus 156 FGla~~~~~~~----~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~-~~~~i~~~~~~ 230 (275)
T 3hyh_A 156 FGLSNIMTDGN----FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVYT 230 (275)
T ss_dssp SSCC-------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCC
T ss_pred cCCCeecCCCC----ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCC
Confidence 99998765322 2234679999999999988876 589999999999999999999997532221 11111111100
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
..+ .++.++.+++.+||+.||++|||++|+++
T Consensus 231 --~p~------------------------------~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 231 --LPK------------------------------FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --CCT------------------------------TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --CCC------------------------------CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 000 12345678999999999999999999987
No 22
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.8e-51 Score=431.50 Aligned_cols=264 Identities=21% Similarity=0.323 Sum_probs=208.7
Q ss_pred cCCCCCceeeccccceEEEEEEC-----CCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 559 EGFSSANLIGIGGYGYVYKGILG-----TEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
.++++.+.||+|+||+||+|++. .+++.||||+++... ....+.|.+|+.++++++|||||+++|+|.+.
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---- 101 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD---- 101 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC----
Confidence 34667889999999999999974 356889999996443 33457899999999999999999999999765
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccc---------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCcee
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQ---------NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nil 703 (871)
...++|||||++|+|.+++....... .....+++.++..++.|||.||+|||++ +||||||||+|||
T Consensus 102 -~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 102 -QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp -SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred -CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 56899999999999999997543210 1123689999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhh
Q 002883 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGL 782 (871)
Q Consensus 704 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~ 782 (871)
+++++.+||+|||+|+...... .........||+.|||||++.++.|+.++|||||||++|||+| |+.||.+....+.
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~-~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~ 256 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAAD-YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 256 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGG-CBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHH
T ss_pred ECCCCCEEECCcccceeccCCC-ceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999998764332 1222344579999999999999999999999999999999999 8999986533221
Q ss_pred hHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHH
Q 002883 783 SLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEA 862 (871)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i 862 (871)
............ ...++..+.+++.+||+.||++|||++||++.|++.
T Consensus 257 --~~~i~~~~~~~~------------------------------p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 257 --VEMIRNRQVLPC------------------------------PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp --HHHHHTTCCCCC------------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred --HHHHHcCCCCCC------------------------------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 111111110000 012344677999999999999999999999999864
Q ss_pred H
Q 002883 863 Q 863 (871)
Q Consensus 863 ~ 863 (871)
.
T Consensus 305 ~ 305 (308)
T 4gt4_A 305 G 305 (308)
T ss_dssp C
T ss_pred c
Confidence 3
No 23
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.3e-49 Score=463.82 Aligned_cols=460 Identities=20% Similarity=0.220 Sum_probs=361.1
Q ss_pred ccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccc
Q 002883 5 EIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGL 84 (871)
Q Consensus 5 ~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 84 (871)
++|..+. ++|+.|+|++|+|++..|.+|+++++|++|+|++|++++..|++|+++++|++|+|++|++++..|..|++
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 96 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGP 96 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTT
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhcc
Confidence 5777765 78999999999999888999999999999999999999888899999999999999999999777777999
Q ss_pred cccccccccccccccC-CCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCC---
Q 002883 85 LKQLNMFQVSANYLTG-SIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASS--- 160 (871)
Q Consensus 85 l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~--- 160 (871)
+++|++|++++|++++ ..|..+.++++|++|++++|.+.+.+|...+..+++|+.|++++|.+++.+|..+.....
T Consensus 97 l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 176 (549)
T 2z81_A 97 LSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHH 176 (549)
T ss_dssp CTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEE
T ss_pred CCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCce
Confidence 9999999999999986 357789999999999999999666888766678999999999999999766655543221
Q ss_pred ----------CCcc-ccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhh---ccccc
Q 002883 161 ----------IPED-LGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIAN---FSSHL 226 (871)
Q Consensus 161 ----------lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~---~~~~L 226 (871)
+|+. +..+++|++|++++|+++..+... ......+++|+.|++++|.+++..+..+.. ...+|
T Consensus 177 L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L 253 (549)
T 2z81_A 177 LTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSP---LPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILEL 253 (549)
T ss_dssp EEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCC---CSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTC
T ss_pred EecccCcccccchhhHhhcccccEEEccCCccccccccc---cchhhhhhcccceeccccccchhHHHHHHHHhhhhccc
Confidence 1222 234556666666666655432111 111233455666666666665433333322 12357
Q ss_pred cEEEccCCccCCCC------CCCCCCccccceeeccccccccc-----CCccccCCCCCcEEEccCCCCCCCCCccc-CC
Q 002883 227 IYLYMSANRISGTI------PTGVGNLKNLILIAMEVNLLTGS-----IPTSVGYLLKLQVLSLFGNKISGEIPSSL-GN 294 (871)
Q Consensus 227 ~~L~L~~n~i~~~~------~~~~~~l~~L~~L~l~~N~l~~~-----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~ 294 (871)
+.|++++|.+.+.. ...+..+.+|+.|++.++.+... .+..+....+|+.|++++|+++ .+|..+ ..
T Consensus 254 ~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~ 332 (549)
T 2z81_A 254 SEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQH 332 (549)
T ss_dssp CEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHH
T ss_pred cccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhc
Confidence 77777777665421 22356677778888877776532 1122344578999999999998 566655 67
Q ss_pred CccccEEEccCccccccCc---ccccCCCCCCEEecCCCcCCCCCc--ccccCCCCCcEEeccCCCCCCCCccccCCCCC
Q 002883 295 LIFLTEVDLQGNSIRGSIP---SALGNCLQLQKLDLSDNNLSGTIP--REVIGLSSFVLLDLSRNHLSGPIPLEVGRLKG 369 (871)
Q Consensus 295 l~~L~~L~L~~N~i~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 369 (871)
+++|++|+|++|++++..| ..+..+++|+.|++++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++
T Consensus 333 l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~ 411 (549)
T 2z81_A 333 LKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEK 411 (549)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTT
T ss_pred CccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhccccc
Confidence 9999999999999997664 347889999999999999985432 56889999999999999999 78888999999
Q ss_pred CCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCC
Q 002883 370 IQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSF 449 (871)
Q Consensus 370 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~ 449 (871)
|++|++++|+++ .+|..+. ++|++|+|++|+|++.. ..+++|++|+|++|+|+ .+|. ...+++|++|+|++
T Consensus 412 L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~ 482 (549)
T 2z81_A 412 MRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISR 482 (549)
T ss_dssp CCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCS
T ss_pred ccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCC
Confidence 999999999998 4555443 68999999999999753 57899999999999999 5665 46799999999999
Q ss_pred CcCcccCCC-CcccccccceeccCCCCCccCC
Q 002883 450 NNLEGEVPS-EGVFKNVRAVSIIGNNKLCGGS 480 (871)
Q Consensus 450 N~l~~~~~~-~~~~~~l~~l~l~~N~~~C~~~ 480 (871)
|++++.+|. ...+++++.+++.+|+|.|+|+
T Consensus 483 N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 483 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp SCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 999998776 3677899999999999999987
No 24
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5e-49 Score=463.80 Aligned_cols=412 Identities=19% Similarity=0.249 Sum_probs=203.8
Q ss_pred CCCCEEecCCCcccccCCccccCCCcCceeeCCCCccc------c------cCCccccCCcccceeeccCccccCC----
Q 002883 14 SELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYT------G------SIPQSLSNLSFLQQLSLSENSLSGN---- 77 (871)
Q Consensus 14 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~------~------~~p~~~~~l~~L~~L~Ls~n~l~~~---- 77 (871)
..++.|+|++|+++|.+|.+|++|++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 46889999999999999999999999999999999762 1 222222 33344 44444444433
Q ss_pred ----------------------------------------CCccccccccccccccccccccCC----------------
Q 002883 78 ----------------------------------------IPSELGLLKQLNMFQVSANYLTGS---------------- 101 (871)
Q Consensus 78 ----------------------------------------~~~~~~~l~~L~~L~l~~n~l~~~---------------- 101 (871)
+|..|+++++|++|+|++|.+++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~ 237 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQ 237 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHH
T ss_pred HHHHHHHHhhcCccccccccccccchhhhhhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcc
Confidence 454555555555555555555432
Q ss_pred -CCcccc--ccCCCceeeeeccccccccccccccCCCCccEEEccCcc-CCC-CCCccCcCCCCCCccccCC------Cc
Q 002883 102 -IPIQLF--NISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNW-FTG-EIPPSISNASSIPEDLGKL------KN 170 (871)
Q Consensus 102 -~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~-i~~-~~p~~~~~~~~lp~~~~~l------~~ 170 (871)
+|..++ ++++|++|++++|.+.+.+|..++ .+++|++|+|++|+ +++ . +|..++.+ ++
T Consensus 238 ~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~n~~l~~~~----------lp~~~~~L~~~~~l~~ 306 (636)
T 4eco_A 238 YKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK-ALPEMQLINVACNRGISGEQ----------LKDDWQALADAPVGEK 306 (636)
T ss_dssp HTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT-TCSSCCEEECTTCTTSCHHH----------HHHHHHHHHHSGGGGT
T ss_pred cCchhhhhcccCCCCEEEecCCcCCccChHHHh-cCCCCCEEECcCCCCCcccc----------chHHHHhhhccccCCC
Confidence 444444 555555555555554444444433 45555555555554 432 2 22222222 45
Q ss_pred ccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccc-
Q 002883 171 LIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKN- 249 (871)
Q Consensus 171 L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~- 249 (871)
|++|++++|+++.++. ...+..+++|++|+|++|++++.+| .+..+ ++|++|++++|+++ .+|..+.++++
T Consensus 307 L~~L~L~~n~l~~ip~-----~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l-~~L~~L~L~~N~l~-~lp~~l~~l~~~ 378 (636)
T 4eco_A 307 IQIIYIGYNNLKTFPV-----ETSLQKMKKLGMLECLYNQLEGKLP-AFGSE-IKLASLNLAYNQIT-EIPANFCGFTEQ 378 (636)
T ss_dssp CCEEECCSSCCSSCCC-----HHHHTTCTTCCEEECCSCCCEEECC-CCEEE-EEESEEECCSSEEE-ECCTTSEEECTT
T ss_pred CCEEECCCCcCCccCc-----hhhhccCCCCCEEeCcCCcCccchh-hhCCC-CCCCEEECCCCccc-cccHhhhhhccc
Confidence 5555555554443220 0034444455555555555544444 33333 23555555555554 44444555554
Q ss_pred cceeecccccccccCCccccCCC--CCcEEEccCCCCCCCCCcccC-------CCccccEEEccCccccccCcccccCCC
Q 002883 250 LILIAMEVNLLTGSIPTSVGYLL--KLQVLSLFGNKISGEIPSSLG-------NLIFLTEVDLQGNSIRGSIPSALGNCL 320 (871)
Q Consensus 250 L~~L~l~~N~l~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~~~~-------~l~~L~~L~L~~N~i~~~~~~~~~~l~ 320 (871)
|+.|++++|.++ .+|..+..+. +|+.|+|++|++++..|..+. .+++|++|+|++|+++...+..+..++
T Consensus 379 L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~ 457 (636)
T 4eco_A 379 VENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGS 457 (636)
T ss_dssp CCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTC
T ss_pred CcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCC
Confidence 555555555554 3444444332 455555555555444444444 444455555555555432222333445
Q ss_pred CCCEEecCCCcCCCCCcc-cccCCC-------CCcEEeccCCCCCCCCccccC--CCCCCCEEeCCCCcCCCCCccchhc
Q 002883 321 QLQKLDLSDNNLSGTIPR-EVIGLS-------SFVLLDLSRNHLSGPIPLEVG--RLKGIQQLDLSENKLSGEIPTSLAS 390 (871)
Q Consensus 321 ~L~~L~L~~N~l~~~~~~-~~~~l~-------~L~~L~ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~ 390 (871)
+|+.|+|++|+++ .+|. .+.... +|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..
T Consensus 458 ~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~ 534 (636)
T 4eco_A 458 PLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLN 534 (636)
T ss_dssp CCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGG
T ss_pred CCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhc
Confidence 5555555555554 2222 222111 4555555555554 3444443 44555555555555543 4444444
Q ss_pred ccCCceeee------cCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcc
Q 002883 391 CVGLEYLNF------SDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEG 454 (871)
Q Consensus 391 l~~L~~L~L------~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~ 454 (871)
+++|++|+| ++|++.+..|..+..+++|++|+|++|+++ .+|..+. ++|+.|+|++|++.+
T Consensus 535 l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 535 SSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--TTCCEEECCSCTTCE
T ss_pred CCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh--CcCCEEECcCCCCcc
Confidence 555555555 234444444444444555555555555552 3443332 445555555554443
No 25
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.2e-50 Score=429.55 Aligned_cols=281 Identities=22% Similarity=0.323 Sum_probs=221.4
Q ss_pred cccCHHHHHHhhcCCCCCceeeccccceEEEEEECCC-----CcEEEEEEeecccc-chHHHHHHHHHHHHcCCC-Cccc
Q 002883 547 LKISYAELLKATEGFSSANLIGIGGYGYVYKGILGTE-----ETNVAVKVLDLQQR-GASKSFIAECEALRSIRH-RNLV 619 (871)
Q Consensus 547 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv 619 (871)
..++.++++...++|++.+.||+|+||+||+|++... ++.||||+++.... ...+.+.+|++++++++| ||||
T Consensus 52 lp~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV 131 (353)
T 4ase_A 52 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131 (353)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEE
Confidence 3456666777778999999999999999999998543 36799999965432 345678999999999965 8999
Q ss_pred eeeeeecccCcCCCceeeEEEeccCCCCHHHHhhcccccc---------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 002883 620 KIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQ---------NQRPKLNLMQRLSIAIDVANVLEYLHHHCHT 690 (871)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~ 690 (871)
+++++|.+. +...|+|||||++|+|.++++...... .....+++.++..++.|||+||+|||++
T Consensus 132 ~l~g~~~~~----~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~--- 204 (353)
T 4ase_A 132 NLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--- 204 (353)
T ss_dssp CEEEEECCT----TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred EEEEEEEec----CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---
Confidence 999998653 245799999999999999997654311 1133589999999999999999999999
Q ss_pred CeEecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-
Q 002883 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT- 769 (871)
Q Consensus 691 ~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt- 769 (871)
+||||||||+|||++.++.+||+|||+|+.+.... .........||+.|||||++.+..|+.++|||||||++|||+|
T Consensus 205 ~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~-~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~ 283 (353)
T 4ase_A 205 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 283 (353)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred CeecCccCccceeeCCCCCEEECcchhhhhcccCC-CceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhC
Confidence 99999999999999999999999999998765433 2233445679999999999999999999999999999999998
Q ss_pred CCCCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCC
Q 002883 770 GKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDR 849 (871)
Q Consensus 770 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 849 (871)
|+.||.+...... +......+......+ .++.++.+++.+||+.||++|
T Consensus 284 G~~Pf~~~~~~~~-~~~~i~~g~~~~~p~------------------------------~~~~~~~~li~~c~~~dP~~R 332 (353)
T 4ase_A 284 GASPYPGVKIDEE-FCRRLKEGTRMRAPD------------------------------YTTPEMYQTMLDCWHGEPSQR 332 (353)
T ss_dssp SCCSSTTCCCSHH-HHHHHHHTCCCCCCT------------------------------TCCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCCCCHHHH-HHHHHHcCCCCCCCc------------------------------cCCHHHHHHHHHHcCcChhHC
Confidence 9999986432221 111111111111000 123457789999999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q 002883 850 MKIQDAIMELQEAQKMR 866 (871)
Q Consensus 850 Pta~evl~~L~~i~~~~ 866 (871)
||+.|+++.|+++.+..
T Consensus 333 Pt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 333 PTFSELVEHLGNLLQAN 349 (353)
T ss_dssp CCHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHh
Confidence 99999999999986543
No 26
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-48 Score=456.20 Aligned_cols=459 Identities=22% Similarity=0.219 Sum_probs=384.1
Q ss_pred cccccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCcc
Q 002883 2 LQGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSE 81 (871)
Q Consensus 2 ~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~ 81 (871)
+.+..|..|.++++|++|||++|+|++..|++|+++++|++|+|++|++++..|++|+++++|++|+|++|++++..+..
T Consensus 40 l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~ 119 (570)
T 2z63_A 40 LRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFP 119 (570)
T ss_dssp CCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCS
T ss_pred cCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCcc
Confidence 34455668999999999999999999888899999999999999999999888899999999999999999999555557
Q ss_pred ccccccccccccccccccC-CCCccccccCCCceeeeeccccccccccccccCCCCc----cEEEccCccCCCCCCccCc
Q 002883 82 LGLLKQLNMFQVSANYLTG-SIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNI----RVLLLGSNWFTGEIPPSIS 156 (871)
Q Consensus 82 ~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L----~~L~l~~n~i~~~~p~~~~ 156 (871)
|+.+++|++|++++|.+++ .+|..+.++++|++|++++|++.+..|.. +..+.+| +.|++++|.+++..|..
T Consensus 120 ~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~~~~~L~l~~n~l~~~~~~~-- 196 (570)
T 2z63_A 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD-LRVLHQMPLLNLSLDLSLNPMNFIQPGA-- 196 (570)
T ss_dssp CTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGG-GHHHHTCTTCCCEEECTTCCCCEECTTT--
T ss_pred ccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHH-ccchhccchhhhhcccCCCCceecCHHH--
Confidence 9999999999999999986 46999999999999999999998444443 3477788 89999999998544432
Q ss_pred CCCCCCccccCCCcccEEecccccCC-------------------------------CCCCCCc----------------
Q 002883 157 NASSIPEDLGKLKNLIRLNFARNNLG-------------------------------TGKGNDL---------------- 189 (871)
Q Consensus 157 ~~~~lp~~~~~l~~L~~L~l~~n~l~-------------------------------~~~~~~~---------------- 189 (871)
+..+ +|+.|++++|... .++...+
T Consensus 197 --------~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 197 --------FKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp --------TTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred --------hccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence 2222 5666666665211 1111100
Q ss_pred -----cccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccC
Q 002883 190 -----RFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSI 264 (871)
Q Consensus 190 -----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 264 (871)
..+..+..+++|++|++++|.++ .+|..+..+ +|++|++++|.++ .+|. ..+++|+.|++++|.+.+..
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred hhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 01244667899999999999998 678888776 6999999999998 4554 57899999999999998665
Q ss_pred CccccCCCCCcEEEccCCCCCCCC--CcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCc-cccc
Q 002883 265 PTSVGYLLKLQVLSLFGNKISGEI--PSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIP-REVI 341 (871)
Q Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~ 341 (871)
+. ..+++|++|++++|++++.. +..+..+++|++|++++|.+.+..+. +..+++|+.|++++|.+++..+ ..+.
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~ 418 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFL 418 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTT
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhh
Confidence 54 78899999999999998544 67889999999999999999965554 9999999999999999987665 5788
Q ss_pred CCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCC-CCCccchhcccCCceeeecCCcccccCccccCCCCCCCE
Q 002883 342 GLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLS-GEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQD 420 (871)
Q Consensus 342 ~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 420 (871)
.+++|++|++++|.+.+..|..+..+++|+.|++++|.++ +.+|..+..+++|++|+|++|++++..|..|..+++|++
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 9999999999999999888999999999999999999997 578999999999999999999999998999999999999
Q ss_pred EeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCCccc-ccc--cceeccCCCCCccCCCc
Q 002883 421 LDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVF-KNV--RAVSIIGNNKLCGGSPE 482 (871)
Q Consensus 421 L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~-~~l--~~l~l~~N~~~C~~~~~ 482 (871)
|++++|++++..|..+..+++|+.|++++|+++|.+|....+ ..+ ....+.+.+ .|..+..
T Consensus 499 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~~~ 562 (570)
T 2z63_A 499 LNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGSGK 562 (570)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTTCC
T ss_pred EeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCCCC
Confidence 999999999988889999999999999999999999876433 111 122344555 7776543
No 27
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=7.5e-49 Score=413.83 Aligned_cols=258 Identities=23% Similarity=0.383 Sum_probs=194.7
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHcCCCCccceeeeeecccCc-------
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDT------- 630 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 630 (871)
++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|++++++++|||||+++++|.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 468999999999999999999999999999999965433 345678999999999999999999999876432
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCce
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA 710 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 710 (871)
....+.|+|||||++|+|.+++...... ...++..++.++.||+.||+|||++ +|+||||||+|||++.++.+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~----~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTI----EERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSG----GGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCC----ChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 1234679999999999999999865421 1356777899999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCCc---------cccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhh
Q 002883 711 HVGDFGLSRLLHDNSPDQ---------TSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG 781 (871)
Q Consensus 711 kl~Dfg~a~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~ 781 (871)
||+|||+|+......... ......+||+.|||||++.+..|+.++||||+||++|||++ ||....+..
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~ 234 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV 234 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH
Confidence 999999998876432211 11233579999999999999999999999999999999996 786533222
Q ss_pred hhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 782 LSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...........|+ .+....+...+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~p~-------------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RTLTDVRNLKFPP-------------------------------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHTTCCCH-------------------------------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHhcCCCCC-------------------------------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2222211111111 11123334568999999999999999999987
No 28
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.8e-50 Score=419.18 Aligned_cols=248 Identities=24% Similarity=0.291 Sum_probs=195.2
Q ss_pred cCCCCCceeeccccceEEEEEEC---CCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 559 EGFSSANLIGIGGYGYVYKGILG---TEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
++|++.+.||+|+||+||+|++. .+++.||||+++... ......+.+|++++++++|||||++++++.+.
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----- 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE----- 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET-----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----
Confidence 57999999999999999999873 467899999996432 22234678899999999999999999998775
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
+..|+|||||+||+|.+++.+.+ .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~~-------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~ 168 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKEV-------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLT 168 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEec
Confidence 67899999999999999998754 699999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||+|+...... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||........ .........+
T Consensus 169 DFGla~~~~~~~---~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-~~~i~~~~~~ 244 (304)
T 3ubd_A 169 DFGLSKESIDHE---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET-MTMILKAKLG 244 (304)
T ss_dssp SSEEEEC--------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCC
T ss_pred ccccceeccCCC---ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH-HHHHHcCCCC
Confidence 999998654322 223346799999999999999999999999999999999999999985432221 1111111110
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCH-----HHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKI-----QDAIM 857 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta-----~evl~ 857 (871)
..+ .++.++.+++.+||+.||++|||| +|+++
T Consensus 245 --~p~------------------------------~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 --MPQ------------------------------FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp --CCT------------------------------TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred --CCC------------------------------cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 000 123456789999999999999995 56654
No 29
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.4e-49 Score=416.87 Aligned_cols=282 Identities=21% Similarity=0.257 Sum_probs=203.0
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeE
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL 638 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 638 (871)
++|.+.+.||+|+||+||+|++ +|+.||||+++.... .......|+..+.+++|||||++++++.+.. ......|+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEE
Confidence 4678889999999999999998 588999999965432 1222344555667789999999999987642 22246799
Q ss_pred EEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeEecCCCCCceeeCCCCceEEe
Q 002883 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-----HTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 639 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
|||||++|+|.++++.. .+++..+.+++.|++.||+|||+++ .++||||||||+|||++.++.+||+
T Consensus 79 V~Ey~~~gsL~~~l~~~--------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~ 150 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY--------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEECCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred EecCCCCCcHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEE
Confidence 99999999999999754 4899999999999999999999752 3589999999999999999999999
Q ss_pred ecccceecCCCCCCc-cccccccccccccCcccccCC------CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHH
Q 002883 714 DFGLSRLLHDNSPDQ-TSTSRVKGSIGYVAPEYGALG------EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHK 786 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~ 786 (871)
|||+|+......... .......||+.|||||++.+. .++.++|||||||++|||+||+.||.........+..
T Consensus 151 DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~ 230 (303)
T 3hmm_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred eCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchh
Confidence 999998775433211 123345799999999987654 4678999999999999999999887542211100000
Q ss_pred HhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHH--hHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883 787 YAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRA--KFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK 864 (871)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~ 864 (871)
... .++... ..... ......+|.... ...++...+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 231 ~~~----------~~~~~~-~~~~~--~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 231 LVP----------SDPSVE-EMRKV--VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TSC----------SSCCHH-HHHHH--HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccc----------ccchHH-HHHHH--HhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 000 000000 00000 000111121111 112456678899999999999999999999999999876
Q ss_pred H
Q 002883 865 M 865 (871)
Q Consensus 865 ~ 865 (871)
.
T Consensus 298 ~ 298 (303)
T 3hmm_A 298 Q 298 (303)
T ss_dssp C
T ss_pred H
Confidence 4
No 30
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.7e-48 Score=447.12 Aligned_cols=437 Identities=19% Similarity=0.215 Sum_probs=310.4
Q ss_pred ccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccc
Q 002883 5 EIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGL 84 (871)
Q Consensus 5 ~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 84 (871)
++|..+. ++|++|+|++|+|++..|++|+++++|++|+|++|++++..|+.|+++++|++|+|++|+++ .+|.. .
T Consensus 14 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~ 88 (520)
T 2z7x_B 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--P 88 (520)
T ss_dssp SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--C
T ss_pred ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--c
Confidence 5888777 89999999999999888899999999999999999999888999999999999999999999 67776 8
Q ss_pred cccccccccccccccC-CCCccccccCCCceeeeeccccccccccccccCCCCc--cEEEccCccC--CCCCCccCcCCC
Q 002883 85 LKQLNMFQVSANYLTG-SIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNI--RVLLLGSNWF--TGEIPPSISNAS 159 (871)
Q Consensus 85 l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L--~~L~l~~n~i--~~~~p~~~~~~~ 159 (871)
+++|++|+|++|++++ .+|..++++++|++|++++|.+.+ ..+..+++| +.|++++|.+ ++..|..+..+.
T Consensus 89 l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 89 TVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp CCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred cCCccEEeccCCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeecccccccccccccccccc
Confidence 9999999999999996 478899999999999999999874 223467788 9999999999 777777666533
Q ss_pred ---------------CCC-ccccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhc-
Q 002883 160 ---------------SIP-EDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANF- 222 (871)
Q Consensus 160 ---------------~lp-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~- 222 (871)
.++ ..+..+++|+.|++++|.-...-......++.+..+++|+.|++++|.+++..+..+...
T Consensus 165 ~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~ 244 (520)
T 2z7x_B 165 TESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLV 244 (520)
T ss_dssp EEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHH
T ss_pred cceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHh
Confidence 122 235567777777777765100000000022345666777777777777664332222211
Q ss_pred -cccccEEEccCCccCCCCCCCC-----CCccccceeecccccccccCC-ccccCC---CCCcEEEccCCCCCCCCCccc
Q 002883 223 -SSHLIYLYMSANRISGTIPTGV-----GNLKNLILIAMEVNLLTGSIP-TSVGYL---LKLQVLSLFGNKISGEIPSSL 292 (871)
Q Consensus 223 -~~~L~~L~L~~n~i~~~~~~~~-----~~l~~L~~L~l~~N~l~~~~~-~~~~~l---~~L~~L~L~~n~l~~~~~~~~ 292 (871)
.++|++|++++|++++.+|..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+
T Consensus 245 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~ 320 (520)
T 2z7x_B 245 WHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CP 320 (520)
T ss_dssp HTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CC
T ss_pred hhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--ch
Confidence 1257777777777776677766 7777777777777777 233 444443 56777777777765321 12
Q ss_pred CCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCC--CCcccccCCCCCcEEeccCCCCCCCCcc-ccCCCCC
Q 002883 293 GNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSG--TIPREVIGLSSFVLLDLSRNHLSGPIPL-EVGRLKG 369 (871)
Q Consensus 293 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~ 369 (871)
..+++|++|++++|++++..|..+..+++|++|++++|++++ .+|..+..+++|++|++++|.+++.+|. .+..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 566777777777777776667777777777777777777764 3445667777777777777777753443 3666777
Q ss_pred CCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCC
Q 002883 370 IQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSF 449 (871)
Q Consensus 370 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~ 449 (871)
|++|++++|++++..|..+. ++|++|+|++|+|+ .+|..+..+++|++|++++|++++..+..+..+++|++|++++
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 477 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHT 477 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcC
Confidence 77777777777655555443 56777777777777 4444455777777777777777743333366777777777777
Q ss_pred CcCcccCC
Q 002883 450 NNLEGEVP 457 (871)
Q Consensus 450 N~l~~~~~ 457 (871)
|+++|.++
T Consensus 478 N~~~c~c~ 485 (520)
T 2z7x_B 478 NPWDCSCP 485 (520)
T ss_dssp SCBCCCHH
T ss_pred CCCcccCC
Confidence 77777665
No 31
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.7e-47 Score=456.87 Aligned_cols=446 Identities=17% Similarity=0.187 Sum_probs=365.2
Q ss_pred CCCCEEecCCCcccccCCccccCCCcCceeeC-CCCcccccCCcc-----------------------------------
Q 002883 14 SELRILDLVVNKLEGNIPSELGNLFKLVGLGL-TGNNYTGSIPQS----------------------------------- 57 (871)
Q Consensus 14 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L-~~n~l~~~~p~~----------------------------------- 57 (871)
..++.|+|++|+++|.+|.+|++|++|++|+| ++|.+.+..|-.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46899999999999999999999999999999 999877653321
Q ss_pred ----------------ccCCcccceeeccC--ccccCCCCccccccccccccccccccccC-----------------CC
Q 002883 58 ----------------LSNLSFLQQLSLSE--NSLSGNIPSELGLLKQLNMFQVSANYLTG-----------------SI 102 (871)
Q Consensus 58 ----------------~~~l~~L~~L~Ls~--n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------~~ 102 (871)
......++.+.+.. |.+++ +|..|++|++|++|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 01223455555554 88886 89999999999999999999997 38
Q ss_pred Ccccc--ccCCCceeeeeccccccccccccccCCCCccEEEccCcc-CCC-CCCccCcCCCCCCccccCCCcccEEeccc
Q 002883 103 PIQLF--NISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNW-FTG-EIPPSISNASSIPEDLGKLKNLIRLNFAR 178 (871)
Q Consensus 103 ~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~-i~~-~~p~~~~~~~~lp~~~~~l~~L~~L~l~~ 178 (871)
|..++ ++++|++|+|++|.+.+.+|..+. .+++|+.|+|++|+ +++ .+|..+.++ +..+..+++|+.|+|++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~-~L~~L~~L~Ls~N~~lsg~~iP~~i~~L---~~~~~~l~~L~~L~Ls~ 557 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLY-DLPELQSLNIACNRGISAAQLKADWTRL---ADDEDTGPKIQIFYMGY 557 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGG-GCSSCCEEECTTCTTSCHHHHHHHHHHH---HHCTTTTTTCCEEECCS
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHh-CCCCCCEEECcCCCCcccccchHHHHhh---hhcccccCCccEEEeeC
Confidence 99987 999999999999999999997765 89999999999998 875 555444321 11344556999999999
Q ss_pred ccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccc-cceeeccc
Q 002883 179 NNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKN-LILIAMEV 257 (871)
Q Consensus 179 n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~-L~~L~l~~ 257 (871)
|+++.++. ...+.++++|++|+|++|+++ .+| .+..+ ++|+.|+|++|+++ .+|..+.++++ |+.|+|++
T Consensus 558 N~L~~ip~-----~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L-~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~ 628 (876)
T 4ecn_A 558 NNLEEFPA-----SASLQKMVKLGLLDCVHNKVR-HLE-AFGTN-VKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSH 628 (876)
T ss_dssp SCCCBCCC-----HHHHTTCTTCCEEECTTSCCC-BCC-CCCTT-SEESEEECCSSCCS-CCCTTSCEECTTCCEEECCS
T ss_pred CcCCccCC-----hhhhhcCCCCCEEECCCCCcc-cch-hhcCC-CcceEEECcCCccc-cchHHHhhccccCCEEECcC
Confidence 99986431 126888999999999999999 778 67666 57999999999999 88889999999 99999999
Q ss_pred ccccccCCccccCCCC--CcEEEccCCCCCCCCCccc---C--CCccccEEEccCccccccCcccccCCCCCCEEecCCC
Q 002883 258 NLLTGSIPTSVGYLLK--LQVLSLFGNKISGEIPSSL---G--NLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDN 330 (871)
Q Consensus 258 N~l~~~~~~~~~~l~~--L~~L~L~~n~l~~~~~~~~---~--~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 330 (871)
|.++ .+|..+..++. |+.|+|++|++.+.+|... . .+++|+.|+|++|+++...+..+..+++|+.|+|++|
T Consensus 629 N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N 707 (876)
T 4ecn_A 629 NKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNN 707 (876)
T ss_dssp SCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSC
T ss_pred CCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCC
Confidence 9999 77888877754 9999999999987665432 2 3458999999999999544445568999999999999
Q ss_pred cCCCCCcccccCC--------CCCcEEeccCCCCCCCCccccC--CCCCCCEEeCCCCcCCCCCccchhcccCCceeeec
Q 002883 331 NLSGTIPREVIGL--------SSFVLLDLSRNHLSGPIPLEVG--RLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFS 400 (871)
Q Consensus 331 ~l~~~~~~~~~~l--------~~L~~L~ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 400 (871)
+|+ .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|+
T Consensus 708 ~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls 784 (876)
T 4ecn_A 708 LMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIR 784 (876)
T ss_dssp CCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECC
T ss_pred cCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECC
Confidence 999 556544432 28999999999999 7888887 99999999999999996 78899999999999997
Q ss_pred C------CcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCCc-ccccccceeccCC
Q 002883 401 D------NSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEG-VFKNVRAVSIIGN 473 (871)
Q Consensus 401 ~------N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~-~~~~l~~l~l~~N 473 (871)
+ |++.+..|..|..+++|+.|+|++|++ +.+|..+. ++|+.|+|++|++....+... .......+.+.+|
T Consensus 785 ~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n 861 (876)
T 4ecn_A 785 HQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYD 861 (876)
T ss_dssp CCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECC
T ss_pred CCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCC
Confidence 6 888889999999999999999999999 57887765 699999999999987654321 1223455666677
Q ss_pred CCCc--cCC
Q 002883 474 NKLC--GGS 480 (871)
Q Consensus 474 ~~~C--~~~ 480 (871)
++.| +|+
T Consensus 862 ~~~~I~gC~ 870 (876)
T 4ecn_A 862 KTQDIRGCD 870 (876)
T ss_dssp TTSEEESCG
T ss_pred CccccCCCC
Confidence 6554 665
No 32
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.9e-48 Score=446.98 Aligned_cols=438 Identities=18% Similarity=0.199 Sum_probs=355.7
Q ss_pred CEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccccc
Q 002883 17 RILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSAN 96 (871)
Q Consensus 17 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n 96 (871)
+.||+++|+++ .+|..+. ++|++|+|++|++++..|+.|.++++|++|+|++|++++..|+.|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 68999999999 6888776 89999999999999888889999999999999999999777999999999999999999
Q ss_pred cccCCCCccccccCCCceeeeecccccc-ccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcc--cE
Q 002883 97 YLTGSIPIQLFNISSMDYFAVTQNKLVG-EIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNL--IR 173 (871)
Q Consensus 97 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L--~~ 173 (871)
+++ .+|.. .+++|++|++++|.+.+ .+|..+. .+++|++|++++|.+++ ..+..+++| ++
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~-~l~~L~~L~L~~n~l~~-------------~~~~~l~~L~L~~ 142 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFG-NMSQLKFLGLSTTHLEK-------------SSVLPIAHLNISK 142 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGG-GCTTCCEEEEEESSCCG-------------GGGGGGTTSCEEE
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhc-cCCcceEEEecCcccch-------------hhccccccceeeE
Confidence 999 67766 89999999999999985 4566655 89999999999999872 346677777 99
Q ss_pred EecccccC--CCCCCCCccccc--------------------cccCCCcccEEEccCCc-------CcccCChhhhhccc
Q 002883 174 LNFARNNL--GTGKGNDLRFLD--------------------SLVNCTFLEVVSLSSNS-------LSGVLPNSIANFSS 224 (871)
Q Consensus 174 L~l~~n~l--~~~~~~~~~~~~--------------------~l~~l~~L~~L~L~~n~-------l~~~~~~~~~~~~~ 224 (871)
|++++|++ ....+..+..+. .+..+++|+.|++++|. +.+.+| .+..+ +
T Consensus 143 L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l-~ 220 (520)
T 2z7x_B 143 VLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTN-P 220 (520)
T ss_dssp EEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGC-T
T ss_pred EEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccc-c
Confidence 99999998 433332222211 23456677777777775 443333 44444 4
Q ss_pred cccEEEccCCccCCCCCCCCC---CccccceeecccccccccCCccc-----cCCCCCcEEEccCCCCCCCCC-cccCCC
Q 002883 225 HLIYLYMSANRISGTIPTGVG---NLKNLILIAMEVNLLTGSIPTSV-----GYLLKLQVLSLFGNKISGEIP-SSLGNL 295 (871)
Q Consensus 225 ~L~~L~L~~n~i~~~~~~~~~---~l~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~~~~-~~~~~l 295 (871)
+|+.|++++|.+++..+..+. .+++|+.|++++|.+++.+|..+ ..+++|+.+++++|.+ .+| ..+..+
T Consensus 221 ~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~ 298 (520)
T 2z7x_B 221 KLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEI 298 (520)
T ss_dssp TCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHH
T ss_pred chhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcc
Confidence 577777777776643222111 13578888888888887788877 8888888888888888 344 445444
Q ss_pred ---ccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCC--CCccccCCCCCC
Q 002883 296 ---IFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSG--PIPLEVGRLKGI 370 (871)
Q Consensus 296 ---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~--~~~~~~~~l~~L 370 (871)
.+|+.|++++|.+.... .+..+++|++|++++|++++..|..+..+++|++|++++|++++ .+|..++.+++|
T Consensus 299 ~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L 376 (520)
T 2z7x_B 299 FSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSL 376 (520)
T ss_dssp HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTC
T ss_pred cccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCC
Confidence 57899999999887432 23688999999999999998899999999999999999999996 455779999999
Q ss_pred CEEeCCCCcCCCCCcc-chhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCC
Q 002883 371 QQLDLSENKLSGEIPT-SLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSF 449 (871)
Q Consensus 371 ~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~ 449 (871)
++|++++|.+++.+|. .+..+++|++|++++|++++..+..+. ++|+.|++++|+++ .+|..+..+++|++|++++
T Consensus 377 ~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~ 453 (520)
T 2z7x_B 377 QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVAS 453 (520)
T ss_dssp CEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCS
T ss_pred CEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCC
Confidence 9999999999974555 488899999999999999877776664 79999999999999 7787777999999999999
Q ss_pred CcCcccCCC-CcccccccceeccCCCCCccCCCcc
Q 002883 450 NNLEGEVPS-EGVFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 450 N~l~~~~~~-~~~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
|+++..++. ...+++++.+++.+|++.|+|+..|
T Consensus 454 N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~ 488 (520)
T 2z7x_B 454 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 488 (520)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHH
T ss_pred CcCCccCHHHhccCCcccEEECcCCCCcccCCchH
Confidence 999976554 4567889999999999999997544
No 33
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.2e-47 Score=452.14 Aligned_cols=402 Identities=20% Similarity=0.272 Sum_probs=345.9
Q ss_pred CcccccCccCcCCCCCCEEecCCCccc------c---------------------------cCCcccc------------
Q 002883 1 MLQGEIPANITHCSELRILDLVVNKLE------G---------------------------NIPSELG------------ 35 (871)
Q Consensus 1 ~~~~~~p~~~~~l~~L~~L~l~~n~i~------~---------------------------~~~~~~~------------ 35 (871)
.+.|++|++|++|++|+.|||++|.+. + .+|..++
T Consensus 92 ~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~ 171 (636)
T 4eco_A 92 GASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQ 171 (636)
T ss_dssp CCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTT
T ss_pred ccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcc
Confidence 368999999999999999999999762 1 1111121
Q ss_pred -------CCCcCceeeCC--CCcccccCCccccCCcccceeeccCccccCC-----------------CCcccc--cccc
Q 002883 36 -------NLFKLVGLGLT--GNNYTGSIPQSLSNLSFLQQLSLSENSLSGN-----------------IPSELG--LLKQ 87 (871)
Q Consensus 36 -------~l~~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~-----------------~~~~~~--~l~~ 87 (871)
....++.+.+. .|++++ +|.+|+++++|++|+|++|++++. +|..++ ++++
T Consensus 172 ~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~ 250 (636)
T 4eco_A 172 QKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKD 250 (636)
T ss_dssp SCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred ccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCC
Confidence 11122222232 689997 899999999999999999999975 999999 9999
Q ss_pred ccccccccccccCCCCccccccCCCceeeeeccc-ccc-ccccccccCC------CCccEEEccCccCCCCCCccCcCCC
Q 002883 88 LNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNK-LVG-EIPHYVGFTL------PNIRVLLLGSNWFTGEIPPSISNAS 159 (871)
Q Consensus 88 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~-~~~~~~~~~l------~~L~~L~l~~n~i~~~~p~~~~~~~ 159 (871)
|++|+|++|.+.+.+|..++++++|++|++++|+ +.+ .+|..++ .+ ++|+.|++++|.++
T Consensus 251 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~-~L~~~~~l~~L~~L~L~~n~l~----------- 318 (636)
T 4eco_A 251 LTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQ-ALADAPVGEKIQIIYIGYNNLK----------- 318 (636)
T ss_dssp CCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHH-HHHHSGGGGTCCEEECCSSCCS-----------
T ss_pred CCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHH-hhhccccCCCCCEEECCCCcCC-----------
Confidence 9999999999999999999999999999999998 887 7888776 44 99999999999997
Q ss_pred CCCc--cccCCCcccEEecccccCC-CCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCcc
Q 002883 160 SIPE--DLGKLKNLIRLNFARNNLG-TGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRI 236 (871)
Q Consensus 160 ~lp~--~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i 236 (871)
.+|. .++.+++|++|++++|+++ .++ .+..+++|++|+|++|+++ .+|..+..+..+|++|++++|++
T Consensus 319 ~ip~~~~l~~l~~L~~L~L~~N~l~g~ip--------~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l 389 (636)
T 4eco_A 319 TFPVETSLQKMKKLGMLECLYNQLEGKLP--------AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKL 389 (636)
T ss_dssp SCCCHHHHTTCTTCCEEECCSCCCEEECC--------CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCC
T ss_pred ccCchhhhccCCCCCEEeCcCCcCccchh--------hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcC
Confidence 6777 7899999999999999997 533 5678899999999999999 88988888854499999999999
Q ss_pred CCCCCCCCCCcc--ccceeecccccccccCCcccc-------CCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCcc
Q 002883 237 SGTIPTGVGNLK--NLILIAMEVNLLTGSIPTSVG-------YLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNS 307 (871)
Q Consensus 237 ~~~~~~~~~~l~--~L~~L~l~~N~l~~~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 307 (871)
+ .+|..+..++ +|+.|++++|.+++..|..|. .+++|++|+|++|+++...+..+..+++|++|+|++|+
T Consensus 390 ~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~ 468 (636)
T 4eco_A 390 K-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNM 468 (636)
T ss_dssp S-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSC
T ss_pred c-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCC
Confidence 9 7888887765 999999999999999999888 88899999999999995545556779999999999999
Q ss_pred ccccCcccccCCC-------CCCEEecCCCcCCCCCccccc--CCCCCcEEeccCCCCCCCCccccCCCCCCCEEeC---
Q 002883 308 IRGSIPSALGNCL-------QLQKLDLSDNNLSGTIPREVI--GLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDL--- 375 (871)
Q Consensus 308 i~~~~~~~~~~l~-------~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L--- 375 (871)
++...+..+.... +|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|
T Consensus 469 l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 469 LTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp CSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSC
T ss_pred CCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCC
Confidence 9944444444333 9999999999999 7888887 99999999999999996 8999999999999999
Q ss_pred ---CCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCC
Q 002883 376 ---SENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSG 430 (871)
Q Consensus 376 ---~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 430 (871)
++|++.+.+|..+..+++|++|+|++|+|+ .+|..+. ++|+.|+|++|++..
T Consensus 547 ~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 547 RDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp BCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--TTCCEEECCSCTTCE
T ss_pred cccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh--CcCCEEECcCCCCcc
Confidence 568888899999999999999999999996 5566655 799999999998874
No 34
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-47 Score=418.65 Aligned_cols=285 Identities=19% Similarity=0.219 Sum_probs=210.8
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCc-CCCce
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDT-RGNEF 635 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 635 (871)
++|++.+.||+|+||+||+|++..+|+.||||+++... ....+.+.+|+++|+.++|||||++++++..... .....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999999999999999996432 2334678899999999999999999998865422 23467
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
+|+|||||+ |+|.+++...+ .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-------~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DF 202 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-------PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDF 202 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeec
Confidence 899999995 68999997654 699999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCC-CccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 716 GLSRLLHDNSP-DQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 716 g~a~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|+|+.+..... ........+||+.|||||++.+. .++.++||||+||++|||++|++||.+....+.........+.+
T Consensus 203 Gla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p 282 (398)
T 4b99_A 203 GMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTP 282 (398)
T ss_dssp TTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred ceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 99987643221 12233456899999999987765 56999999999999999999999998654332222212222222
Q ss_pred ch-hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 794 DQ-VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 794 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.. .......... ...........+......++....++.+|+.+||..||++||||+|+++
T Consensus 283 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 283 SPAVIQAVGAERV---RAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CGGGTC-----CH---HHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ChHHhhhhhhhhh---hhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 21 1111111100 0001111111111222223344567889999999999999999999986
No 35
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.3e-46 Score=438.48 Aligned_cols=435 Identities=20% Similarity=0.179 Sum_probs=351.9
Q ss_pred cccccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccC-CCCc
Q 002883 2 LQGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSG-NIPS 80 (871)
Q Consensus 2 ~~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~-~~~~ 80 (871)
+.+..|..|.++++|++|+|++|+|++..|++|+++++|++|+|++|++++..|..|+++++|++|+|++|++++ ..|.
T Consensus 38 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 117 (549)
T 2z81_A 38 ITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTS 117 (549)
T ss_dssp CCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSC
T ss_pred cCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhh
Confidence 455667889999999999999999998888999999999999999999998777789999999999999999985 3577
Q ss_pred cccccccccccccccccccCCCC-ccccccCCCceeeeeccccccccccccc-----------------------cCCCC
Q 002883 81 ELGLLKQLNMFQVSANYLTGSIP-IQLFNISSMDYFAVTQNKLVGEIPHYVG-----------------------FTLPN 136 (871)
Q Consensus 81 ~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~-----------------------~~l~~ 136 (871)
.|+++++|++|++++|.+.+.+| ..+.++++|++|++++|.+.+.+|..+. ..+++
T Consensus 118 ~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~ 197 (549)
T 2z81_A 118 LFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSS 197 (549)
T ss_dssp SCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTT
T ss_pred hhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhccc
Confidence 89999999999999998544554 6789999999999999998876666543 13566
Q ss_pred ccEEEccCccCCCCCCccCcCCCCCCcc-ccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccC
Q 002883 137 IRVLLLGSNWFTGEIPPSISNASSIPED-LGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVL 215 (871)
Q Consensus 137 L~~L~l~~n~i~~~~p~~~~~~~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 215 (871)
|+.|++++|.+++... .|.. ...+++|+.|++++|.++..... .....+..+++|+.|++++|.+.+..
T Consensus 198 L~~L~L~~n~l~~~~~--------~~~~~~~~~~~L~~L~l~~n~l~~~~~~--~l~~~~~~~~~L~~l~l~~~~~~~~~ 267 (549)
T 2z81_A 198 VRYLELRDTNLARFQF--------SPLPVDEVSSPMKKLAFRGSVLTDESFN--ELLKLLRYILELSEVEFDDCTLNGLG 267 (549)
T ss_dssp BSEEEEESCBCTTCCC--------CCCSSCCCCCCCCEEEEESCEEEHHHHH--HHHGGGGGCTTCCEEEEESCEEECCS
T ss_pred ccEEEccCCccccccc--------cccchhhhhhcccceeccccccchhHHH--HHHHHhhhhccccccccccccccccc
Confidence 7777777777763210 0111 34578999999999988642211 12234567789999999999987531
Q ss_pred C------hhhhhccccccEEEccCCccCCCC-----CCCCCCccccceeecccccccccCCccc-cCCCCCcEEEccCCC
Q 002883 216 P------NSIANFSSHLIYLYMSANRISGTI-----PTGVGNLKNLILIAMEVNLLTGSIPTSV-GYLLKLQVLSLFGNK 283 (871)
Q Consensus 216 ~------~~~~~~~~~L~~L~L~~n~i~~~~-----~~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~L~~n~ 283 (871)
. ..+..+ .+|+.|+++++.+.... +..+..+++|+.|++++|.++ .+|..+ ..+++|++|+|++|+
T Consensus 268 ~~~~~~~~~~~~l-~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~ 345 (549)
T 2z81_A 268 DFNPSESDVVSEL-GKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENL 345 (549)
T ss_dssp CCCCCTTTCCCCC-TTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSC
T ss_pred cccccchhhhhhh-cccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCc
Confidence 1 112233 57999999999886321 111233578999999999998 566665 679999999999999
Q ss_pred CCCCCC---cccCCCccccEEEccCccccccCc--ccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCC
Q 002883 284 ISGEIP---SSLGNLIFLTEVDLQGNSIRGSIP--SALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSG 358 (871)
Q Consensus 284 l~~~~~---~~~~~l~~L~~L~L~~N~i~~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 358 (871)
+++..| ..++.+++|++|+|++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|++|++++|.++
T Consensus 346 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~- 423 (549)
T 2z81_A 346 MVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR- 423 (549)
T ss_dssp CCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-
T ss_pred cccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-
Confidence 987653 447889999999999999986543 56899999999999999999 78888999999999999999998
Q ss_pred CCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccc
Q 002883 359 PIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNT 438 (871)
Q Consensus 359 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 438 (871)
.+|..+ .++|+.|+|++|++++.. ..+++|++|+|++|+|+.+ |. ...+++|++|+|++|++++.+|..+..
T Consensus 424 ~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~i-p~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 495 (549)
T 2z81_A 424 VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLKTL-PD-ASLFPVLLVMKISRNQLKSVPDGIFDR 495 (549)
T ss_dssp CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSSC-CC-GGGCTTCCEEECCSSCCCCCCTTGGGG
T ss_pred cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccCcC-CC-cccCccCCEEecCCCccCCcCHHHHhc
Confidence 445443 368999999999999643 5789999999999999954 44 467899999999999999999999999
Q ss_pred cccccEEecCCCcCcccCCC
Q 002883 439 FRFLQKLNLSFNNLEGEVPS 458 (871)
Q Consensus 439 ~~~L~~L~l~~N~l~~~~~~ 458 (871)
+++|+.|++++|++.|.+|.
T Consensus 496 l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 496 LTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CTTCCEEECCSSCBCCCHHH
T ss_pred CcccCEEEecCCCccCCCcc
Confidence 99999999999999998874
No 36
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.1e-46 Score=447.59 Aligned_cols=418 Identities=19% Similarity=0.211 Sum_probs=351.0
Q ss_pred CcCceeeCCCCcccccCCccccCCcccceeec-cCccccCCCCccc----------------------------------
Q 002883 38 FKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSL-SENSLSGNIPSEL---------------------------------- 82 (871)
Q Consensus 38 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~n~l~~~~~~~~---------------------------------- 82 (871)
.+++.|+|++|.+.|.+|.+|++|++|++|+| ++|.+++..|-..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 67999999999999999999999999999999 9998876533210
Q ss_pred -----------------ccccccccccccc--ccccCCCCccccccCCCceeeeecccccc-----------------cc
Q 002883 83 -----------------GLLKQLNMFQVSA--NYLTGSIPIQLFNISSMDYFAVTQNKLVG-----------------EI 126 (871)
Q Consensus 83 -----------------~~l~~L~~L~l~~--n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------~~ 126 (871)
.....++.+.+.. |.+++ +|..++++++|++|+|++|.+.+ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1223445555554 89996 99999999999999999999997 38
Q ss_pred cccc-ccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEeccccc-CCC--CCCCCcccc-ccccCCCcc
Q 002883 127 PHYV-GFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNN-LGT--GKGNDLRFL-DSLVNCTFL 201 (871)
Q Consensus 127 ~~~~-~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~-l~~--~~~~~~~~~-~~l~~l~~L 201 (871)
|..+ +..+++|+.|+|++|.+.+ .+|..|+++++|+.|+|++|+ ++. +|.. +..+ ..+..+++|
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~----------~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~-i~~L~~~~~~l~~L 550 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMT----------QLPDFLYDLPELQSLNIACNRGISAAQLKAD-WTRLADDEDTGPKI 550 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCC----------SCCGGGGGCSSCCEEECTTCTTSCHHHHHHH-HHHHHHCTTTTTTC
T ss_pred ChhhhhccCCCCCEEECcCCCCCc----------cChHHHhCCCCCCEEECcCCCCcccccchHH-HHhhhhcccccCCc
Confidence 8877 4589999999999999885 566678899999999999998 753 2211 1111 134556699
Q ss_pred cEEEccCCcCcccCCh--hhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCC-CcEEE
Q 002883 202 EVVSLSSNSLSGVLPN--SIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLK-LQVLS 278 (871)
Q Consensus 202 ~~L~L~~n~l~~~~~~--~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~-L~~L~ 278 (871)
++|+|++|+++ .+|. .+..+ ++|+.|+|++|+++ .+| .|+.+++|+.|+|++|.++ .+|..+..+++ |+.|+
T Consensus 551 ~~L~Ls~N~L~-~ip~~~~l~~L-~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~ 625 (876)
T 4ecn_A 551 QIFYMGYNNLE-EFPASASLQKM-VKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLG 625 (876)
T ss_dssp CEEECCSSCCC-BCCCHHHHTTC-TTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEE
T ss_pred cEEEeeCCcCC-ccCChhhhhcC-CCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEE
Confidence 99999999999 7888 88887 47999999999999 777 8999999999999999999 88889999999 99999
Q ss_pred ccCCCCCCCCCcccCCCcc--ccEEEccCccccccCcccc---c--CCCCCCEEecCCCcCCCCCccc-ccCCCCCcEEe
Q 002883 279 LFGNKISGEIPSSLGNLIF--LTEVDLQGNSIRGSIPSAL---G--NCLQLQKLDLSDNNLSGTIPRE-VIGLSSFVLLD 350 (871)
Q Consensus 279 L~~n~l~~~~~~~~~~l~~--L~~L~L~~N~i~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~ 350 (871)
|++|+++ .+|..+..+.. |+.|+|++|++.+.+|... . .+++|+.|+|++|+++ .+|.. +..+++|+.|+
T Consensus 626 Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~ 703 (876)
T 4ecn_A 626 FSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTII 703 (876)
T ss_dssp CCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEE
T ss_pred CcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEE
Confidence 9999999 78888887764 9999999999997666432 2 3458999999999999 55554 45899999999
Q ss_pred ccCCCCCCCCccccCC--------CCCCCEEeCCCCcCCCCCccchh--cccCCceeeecCCcccccCccccCCCCCCCE
Q 002883 351 LSRNHLSGPIPLEVGR--------LKGIQQLDLSENKLSGEIPTSLA--SCVGLEYLNFSDNSFQGPIHSGFSSLKGLQD 420 (871)
Q Consensus 351 ls~N~l~~~~~~~~~~--------l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 420 (871)
|++|+++ .+|..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.
T Consensus 704 Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~ 780 (876)
T 4ecn_A 704 LSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKA 780 (876)
T ss_dssp CCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCE
T ss_pred CCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCE
Confidence 9999999 56654443 239999999999999 7888887 99999999999999997 6888899999999
Q ss_pred EeCCC------CcCCCCCcccccccccccEEecCCCcCcccCCCCcccccccceeccCCCCCccC
Q 002883 421 LDLSR------NNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGG 479 (871)
Q Consensus 421 L~l~~------N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~ 479 (871)
|+|++ |++.+.+|..+..+++|+.|+|++|++ +.+|.. .+++++.+++.+|++..-.
T Consensus 781 L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 781 FGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNPNISID 843 (876)
T ss_dssp EECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCTTCEEE
T ss_pred EECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCCCCccC
Confidence 99977 888899999999999999999999999 555654 3478999999999976543
No 37
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.3e-45 Score=433.86 Aligned_cols=467 Identities=21% Similarity=0.191 Sum_probs=359.1
Q ss_pred ccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccc
Q 002883 5 EIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGL 84 (871)
Q Consensus 5 ~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 84 (871)
++|..|. +++++|||++|+|++..|.+|+++++|++|+|++|+|+++.|++|.++++|++|+|++|+|++..+..|++
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~ 122 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 122 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcC
Confidence 5777765 47999999999999888899999999999999999999888889999999999999999999666678999
Q ss_pred cccccccccccccccCCCCccccccCCCceeeeeccccccc-cccccccCCCCccEEEccCccCCCCCCccCcCCCC---
Q 002883 85 LKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGE-IPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASS--- 160 (871)
Q Consensus 85 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~--- 160 (871)
|++|++|+|++|++++..+..|.++++|++|++++|.+.+. +|..+ ..+++|+.|+|++|+|++..|.++..+..
T Consensus 123 L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~ 201 (635)
T 4g8a_A 123 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF-SNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 201 (635)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG-GGCTTCCEEECCSSCCCEECGGGGHHHHTCTT
T ss_pred CCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhh-ccchhhhhhcccCccccccccccccchhhhhh
Confidence 99999999999999976677899999999999999999753 45444 48999999999999998655554422111
Q ss_pred --------------CCccccCCCcccEEecccccCC-------------------------------CCCCCCcc-----
Q 002883 161 --------------IPEDLGKLKNLIRLNFARNNLG-------------------------------TGKGNDLR----- 190 (871)
Q Consensus 161 --------------lp~~~~~l~~L~~L~l~~n~l~-------------------------------~~~~~~~~----- 190 (871)
++........++.+++++|... ......+.
T Consensus 202 ~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l 281 (635)
T 4g8a_A 202 LNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 281 (635)
T ss_dssp CCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGS
T ss_pred hhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccch
Confidence 1111112222333333333211 00000000
Q ss_pred ----------------ccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceee
Q 002883 191 ----------------FLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIA 254 (871)
Q Consensus 191 ----------------~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 254 (871)
....+..+.+++.+++.+|.+... + .+... ..|+.|++.+|.+....+ ..++.|+.++
T Consensus 282 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-~-~~~~~-~~L~~L~l~~~~~~~~~~---~~l~~L~~l~ 355 (635)
T 4g8a_A 282 TIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV-K-DFSYN-FGWQHLELVNCKFGQFPT---LKLKSLKRLT 355 (635)
T ss_dssp EEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC-G-GGGSC-CCCSEEEEESCEESSCCC---CBCTTCCEEE
T ss_pred hhhhhhhhhhcccccchhhhhhhhcccccccccccccccc-c-ccccc-hhhhhhhcccccccCcCc---ccchhhhhcc
Confidence 001122234455555555555422 1 12222 357788888887764443 3456677788
Q ss_pred cccccccccCCccccCCCCCcEEEccCCCCCC--CCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcC
Q 002883 255 MEVNLLTGSIPTSVGYLLKLQVLSLFGNKISG--EIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNL 332 (871)
Q Consensus 255 l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 332 (871)
+..|.+... ..+..+++|+.|++++|.+.. ..+..+..+.+|+.|++..|.+. ..+..+..+++|+.+++++|..
T Consensus 356 l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~ 432 (635)
T 4g8a_A 356 FTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNL 432 (635)
T ss_dssp EESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEE
T ss_pred cccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccc
Confidence 888877632 334568899999999998863 23555667888999999999887 4566788899999999999887
Q ss_pred CCCCc-ccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCC-CCCccchhcccCCceeeecCCcccccCcc
Q 002883 333 SGTIP-REVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLS-GEIPTSLASCVGLEYLNFSDNSFQGPIHS 410 (871)
Q Consensus 333 ~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 410 (871)
....+ ..+..+++++.++++.|.+.+..+..+..++.|+.|++++|.+. +..|..|..+++|++|+|++|+|+++.|.
T Consensus 433 ~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~ 512 (635)
T 4g8a_A 433 KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 512 (635)
T ss_dssp ESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChH
Confidence 65443 56788999999999999999888889999999999999999754 45788899999999999999999999999
Q ss_pred ccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCC-ccc-ccccceeccCCCCCccCCCcc
Q 002883 411 GFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE-GVF-KNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 411 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~-~~~-~~l~~l~l~~N~~~C~~~~~~ 483 (871)
.|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++..|.. ..+ .+++.+++.+|||.|+|...|
T Consensus 513 ~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~ 587 (635)
T 4g8a_A 513 AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQS 587 (635)
T ss_dssp TTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHH
T ss_pred HHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHH
Confidence 9999999999999999999988999999999999999999999988764 233 578999999999999997543
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.4e-46 Score=431.42 Aligned_cols=436 Identities=19% Similarity=0.200 Sum_probs=288.2
Q ss_pred ccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccc
Q 002883 5 EIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGL 84 (871)
Q Consensus 5 ~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 84 (871)
++|..+. ++|+.|+|++|+|++..|++|+++++|++|+|++|++++..|+.|.++++|++|+|++|+++ .+|.. .
T Consensus 45 ~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~ 119 (562)
T 3a79_B 45 HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--P 119 (562)
T ss_dssp SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--C
T ss_pred cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--c
Confidence 3676665 67888888888888777788888888888888888888777888888888888888888887 66665 7
Q ss_pred cccccccccccccccC-CCCccccccCCCceeeeeccccccccccccccCCCCc--cEEEccCccC--CCCCCccCcCCC
Q 002883 85 LKQLNMFQVSANYLTG-SIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNI--RVLLLGSNWF--TGEIPPSISNAS 159 (871)
Q Consensus 85 l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L--~~L~l~~n~i--~~~~p~~~~~~~ 159 (871)
+++|++|+|++|++++ .+|..|.++++|++|++++|++.+. .+..+++| +.|++++|.+ ++..|..+.++.
T Consensus 120 l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 120 MASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL----DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp CTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT----TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECC
T ss_pred cccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC----chhhhhhceeeEEEeecccccccccCcccccccC
Confidence 8888888888888875 3357788888888888888887632 12244555 8888888888 666665554432
Q ss_pred ---------------CCCc-cccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhh--
Q 002883 160 ---------------SIPE-DLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIAN-- 221 (871)
Q Consensus 160 ---------------~lp~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~-- 221 (871)
.+++ .+..+++|+.|++++|+.... .....++.+..+++|+.|+++++.+++.....+..
T Consensus 196 ~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~--~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~ 273 (562)
T 3a79_B 196 TTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ--RLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF 273 (562)
T ss_dssp EEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH--HHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH
T ss_pred cceEEEEecCccchhhhhhhcccccceEEEecccccccccc--hHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhh
Confidence 1121 244555566666655531100 00001223445555555655555554221111110
Q ss_pred ccccccEEEccCCccCCCCCCCC-----CCccccceeecccccccccCC-ccccCC---CCCcEEEccCCCCCCCCCccc
Q 002883 222 FSSHLIYLYMSANRISGTIPTGV-----GNLKNLILIAMEVNLLTGSIP-TSVGYL---LKLQVLSLFGNKISGEIPSSL 292 (871)
Q Consensus 222 ~~~~L~~L~L~~n~i~~~~~~~~-----~~l~~L~~L~l~~N~l~~~~~-~~~~~l---~~L~~L~L~~n~l~~~~~~~~ 292 (871)
..++|++|++++|++++.+|..+ ..+++|+.++++.|.+ ..| ..+..+ .+|++|++++|.+.... ..
T Consensus 274 ~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~ 349 (562)
T 3a79_B 274 WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CP 349 (562)
T ss_dssp TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CC
T ss_pred hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--Cc
Confidence 01257777777777776677666 6666777777776666 233 222222 56777888877775221 12
Q ss_pred CCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCC--cccccCCCCCcEEeccCCCCCCCCc-cccCCCCC
Q 002883 293 GNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTI--PREVIGLSSFVLLDLSRNHLSGPIP-LEVGRLKG 369 (871)
Q Consensus 293 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~ 369 (871)
..+++|++|++++|++++..|..+.++++|++|++++|++++.. |..+..+++|++|++++|.+++.+| ..+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 56777778888888877767777777778888888888777432 3557777778888888887776344 34677777
Q ss_pred CCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCC
Q 002883 370 IQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSF 449 (871)
Q Consensus 370 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~ 449 (871)
|+.|++++|++++..|..+. ++|++|+|++|+|+. +|..+..+++|++|+|++|++++..+..+..+++|+.|++++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 88888888877755554443 577777888887774 444444777778888888877743333377777777777877
Q ss_pred CcCcccCCC
Q 002883 450 NNLEGEVPS 458 (871)
Q Consensus 450 N~l~~~~~~ 458 (871)
|+++|.++.
T Consensus 507 N~~~c~c~~ 515 (562)
T 3a79_B 507 NPWDCTCPG 515 (562)
T ss_dssp CCBCCCHHH
T ss_pred CCcCCCcch
Confidence 777776664
No 39
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.3e-46 Score=403.78 Aligned_cols=204 Identities=23% Similarity=0.347 Sum_probs=172.0
Q ss_pred hhcCCCCCceeeccccceEEEEEEC---CCCcEEEEEEeeccccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILG---TEETNVAVKVLDLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 632 (871)
-.++|++.+.||+|+||+||+|+++ .+++.||+|++.... ...++.+|+++++.+ +||||++++++|.+.
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~---- 92 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN---- 92 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET----
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC----
Confidence 3578999999999999999999874 457889999986443 346788999999998 699999999998765
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC-CceE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE-MVAH 711 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~k 711 (871)
++.|+||||+++|+|.+++. .+++.+++.++.||+.||+|||++ ||+||||||+|||++.+ +.+|
T Consensus 93 -~~~~lvmE~~~g~~L~~~~~----------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 93 -DHVVIAMPYLEHESFLDILN----------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp -TEEEEEEECCCCCCHHHHHT----------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEE
T ss_pred -CEEEEEEeCCCcccHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEE
Confidence 77999999999999999984 388999999999999999999999 99999999999999876 7999
Q ss_pred EeecccceecCCCCCC-------------------------ccccccccccccccCcccccCC-CCCCccchhhHHHHHH
Q 002883 712 VGDFGLSRLLHDNSPD-------------------------QTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILML 765 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ 765 (871)
|+|||+|+...+.... .......+||+.|+|||++.+. .|+.++||||+||++|
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238 (361)
T ss_dssp ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHH
Confidence 9999999876542211 0112335799999999988765 4899999999999999
Q ss_pred HHHhCCCCCchhhhh
Q 002883 766 EMFTGKRPTDDMFEE 780 (871)
Q Consensus 766 elltG~~pf~~~~~~ 780 (871)
||++|+.||....++
T Consensus 239 ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 239 SLLSGRYPFYKASDD 253 (361)
T ss_dssp HHHHTCSSSSCCSSH
T ss_pred HHHHCCCCCCCCCCH
Confidence 999999999754443
No 40
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7.2e-45 Score=423.91 Aligned_cols=442 Identities=17% Similarity=0.151 Sum_probs=334.0
Q ss_pred CCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccc
Q 002883 13 CSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQ 92 (871)
Q Consensus 13 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 92 (871)
+...+.+|+++|+++ .+|..+. ++|++|+|++|++++..|++|.++++|++|+|++|++++..|+.|+++++|++|+
T Consensus 30 ~~~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 106 (562)
T 3a79_B 30 NELESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLD 106 (562)
T ss_dssp ---CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEE
Confidence 344589999999999 5787664 8999999999999988888999999999999999999988899999999999999
Q ss_pred cccccccCCCCccccccCCCceeeeecccccc-ccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcc
Q 002883 93 VSANYLTGSIPIQLFNISSMDYFAVTQNKLVG-EIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNL 171 (871)
Q Consensus 93 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L 171 (871)
|++|+++ .+|.. .+++|++|++++|++.+ .+|..+ ..+++|+.|++++|.+++ ..+..+++|
T Consensus 107 Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~-~~l~~L~~L~L~~n~l~~-------------~~~~~l~~L 169 (562)
T 3a79_B 107 VSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEF-GNLTKLTFLGLSAAKFRQ-------------LDLLPVAHL 169 (562)
T ss_dssp CTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGG-GGCTTCCEEEEECSBCCT-------------TTTGGGTTS
T ss_pred CCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhh-cccCcccEEecCCCcccc-------------Cchhhhhhc
Confidence 9999999 67776 89999999999999984 233444 489999999999999972 224455555
Q ss_pred --cEEecccccC--CCCCCCCccccc--------------------cccCCCcccEEEccCCcCc----ccCChhhhhcc
Q 002883 172 --IRLNFARNNL--GTGKGNDLRFLD--------------------SLVNCTFLEVVSLSSNSLS----GVLPNSIANFS 223 (871)
Q Consensus 172 --~~L~l~~n~l--~~~~~~~~~~~~--------------------~l~~l~~L~~L~L~~n~l~----~~~~~~~~~~~ 223 (871)
++|++++|++ ....+..+..+. .+..+++|+.|++++|... ......+..+
T Consensus 170 ~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l- 248 (562)
T 3a79_B 170 HLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRG- 248 (562)
T ss_dssp CEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSC-
T ss_pred eeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhcc-
Confidence 9999999998 554433222211 1223344444444444210 0011122222
Q ss_pred ccccEEEccCCccCCCC----CCCCCCccccceeecccccccccCCccc-----cCCCCCcEEEccCCCCCCCCC-cccC
Q 002883 224 SHLIYLYMSANRISGTI----PTGVGNLKNLILIAMEVNLLTGSIPTSV-----GYLLKLQVLSLFGNKISGEIP-SSLG 293 (871)
Q Consensus 224 ~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~~~~-~~~~ 293 (871)
++|+.|+++++.+++.. +.. ...++|++|++++|.+++.+|..+ ..+++|+.++++.|.+ .+| ..+.
T Consensus 249 ~~L~~L~L~~~~l~~~~~~~~~~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~ 325 (562)
T 3a79_B 249 PTLLNVTLQHIETTWKCSVKLFQF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALY 325 (562)
T ss_dssp SSCEEEEEEEEEECHHHHHHHHHH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHH
T ss_pred CcceEEEecCCcCcHHHHHHHHHh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhh
Confidence 23444444444433210 111 112478888888888887777766 6666666666666666 233 2222
Q ss_pred CC---ccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCC--CccccCCCC
Q 002883 294 NL---IFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGP--IPLEVGRLK 368 (871)
Q Consensus 294 ~l---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~--~~~~~~~l~ 368 (871)
.+ .+|++|++++|.+.... ....+++|++|++++|++++..|..+..+++|+.|++++|++++. .|..++.++
T Consensus 326 ~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~ 403 (562)
T 3a79_B 326 SVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMS 403 (562)
T ss_dssp HHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCT
T ss_pred hhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCC
Confidence 22 56999999999886332 236889999999999999988999999999999999999999953 346789999
Q ss_pred CCCEEeCCCCcCCCCCc-cchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEec
Q 002883 369 GIQQLDLSENKLSGEIP-TSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNL 447 (871)
Q Consensus 369 ~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l 447 (871)
+|+.|++++|++++.+| ..+..+++|++|+|++|++++..+..+. ++|+.|+|++|+++ .+|..+..+++|++|+|
T Consensus 404 ~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L 480 (562)
T 3a79_B 404 SLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNV 480 (562)
T ss_dssp TCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEEC
T ss_pred CCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEEC
Confidence 99999999999997455 4588999999999999999876666554 79999999999999 67776679999999999
Q ss_pred CCCcCcccCCC-CcccccccceeccCCCCCccCCCcc
Q 002883 448 SFNNLEGEVPS-EGVFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 448 ~~N~l~~~~~~-~~~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
++|+++..++. ...++.++.+++.+|||.|+|+..|
T Consensus 481 ~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~ 517 (562)
T 3a79_B 481 ASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIR 517 (562)
T ss_dssp CSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHH
T ss_pred CCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHH
Confidence 99999976655 4667889999999999999997544
No 41
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.9e-45 Score=412.56 Aligned_cols=249 Identities=19% Similarity=0.251 Sum_probs=199.3
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHH---HHHHHHHHcCCCCccceeeeeecccCcC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSF---IAECEALRSIRHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~ 631 (871)
.++|++.+.||+|+||+||+|++..+|+.||||+++... ....... ..++.+++.++|||||+++++|.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~--- 264 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--- 264 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS---
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC---
Confidence 467999999999999999999999999999999996432 1122233 3446677788999999999999876
Q ss_pred CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 002883 632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711 (871)
Q Consensus 632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 711 (871)
..+|+|||||+||+|.+++...+ .+++..++.++.||+.||+|||++ |||||||||+|||++.+|.+|
T Consensus 265 --~~lylVmEy~~GGdL~~~l~~~~-------~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vK 332 (689)
T 3v5w_A 265 --DKLSFILDLMNGGDLHYHLSQHG-------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVR 332 (689)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEE
T ss_pred --CEEEEEEecCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEE
Confidence 77999999999999999998754 699999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhh-hHHHHhh
Q 002883 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGL-SLHKYAK 789 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~-~~~~~~~ 789 (871)
|+|||+|+...... ....+||+.|||||++.+ ..|+.++|+||+||++|||++|+.||........ .......
T Consensus 333 L~DFGlA~~~~~~~-----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~ 407 (689)
T 3v5w_A 333 ISDLGLACDFSKKK-----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407 (689)
T ss_dssp ECCCTTCEECSSCC-----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH
T ss_pred ecccceeeecCCCC-----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Confidence 99999998775432 233579999999999864 5799999999999999999999999975432211 1111111
Q ss_pred hCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCC-----HHHHHH
Q 002883 790 MGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMK-----IQDAIM 857 (871)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----a~evl~ 857 (871)
.. +..... .+..++.+++.+||+.||++|++ |+||++
T Consensus 408 ~~-~~~~p~------------------------------~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 408 TM-AVELPD------------------------------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HC-CCCCCT------------------------------TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CC-CCCCCc------------------------------cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 10 000000 12345679999999999999998 677754
No 42
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.8e-45 Score=417.78 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=209.9
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||+||+|++..+|+.||+|++........+.+.+|+++|+.++|||||+++++|.+. ..+|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD-----NEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS-----SEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-----CEEE
Confidence 36899999999999999999999999999999999766655667889999999999999999999998765 7799
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC--CceEEeec
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE--MVAHVGDF 715 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~--~~~kl~Df 715 (871)
+|||||+||+|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+||
T Consensus 231 iv~E~~~gg~L~~~i~~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DF 301 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHN------KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDF 301 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTS------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred EEEeecCCCcHHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeec
Confidence 99999999999999965432 589999999999999999999999 99999999999999854 89999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC--CC
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG--LP 793 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~--~~ 793 (871)
|+|+.+... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+...... +....... ++
T Consensus 302 G~a~~~~~~----~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~~~i~~~~~~~~ 376 (573)
T 3uto_A 302 GLTAHLDPK----QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNMD 376 (573)
T ss_dssp SSCEECCTT----SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTTCCCCC
T ss_pred cceeEccCC----CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHhCCCCCC
Confidence 999987543 223345799999999999999999999999999999999999999986433221 11111111 11
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
... +..+..++.+|+.+||+.||++|||+.|+++
T Consensus 377 ~~~------------------------------~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 377 DSA------------------------------FSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp SGG------------------------------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccc------------------------------ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111 1122345678999999999999999999987
No 43
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.4e-43 Score=417.49 Aligned_cols=466 Identities=21% Similarity=0.202 Sum_probs=371.9
Q ss_pred ccccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccc
Q 002883 3 QGEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSEL 82 (871)
Q Consensus 3 ~~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 82 (871)
++..|.+|.++++|++|||++|+|++..|++|++|++|++|+|++|+|++..++.|.++++|++|+|++|++++..+..|
T Consensus 65 ~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~ 144 (635)
T 4g8a_A 65 RHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI 144 (635)
T ss_dssp CEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCC
T ss_pred CCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhh
Confidence 33344679999999999999999998888999999999999999999997777889999999999999999996666789
Q ss_pred cccccccccccccccccC-CCCccccccCCCceeeeeccccccccccccccCCCCc----cEEEccCccCCCCCCccCcC
Q 002883 83 GLLKQLNMFQVSANYLTG-SIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNI----RVLLLGSNWFTGEIPPSISN 157 (871)
Q Consensus 83 ~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L----~~L~l~~n~i~~~~p~~~~~ 157 (871)
+++++|++|+|++|+++. ..|..+..+++|++|++++|++.+..|..+. .+.++ ..++++.|.++...|..+..
T Consensus 145 ~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~-~L~~l~~~~~~~~ls~n~l~~i~~~~~~~ 223 (635)
T 4g8a_A 145 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR-VLHQMPLLNLSLDLSLNPMNFIQPGAFKE 223 (635)
T ss_dssp TTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH-HHHTCTTCCCEEECTTCCCCEECTTTTTT
T ss_pred hcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccccc-chhhhhhhhhhhhcccCcccccCcccccc
Confidence 999999999999999985 4578889999999999999999854444332 33332 35666666665322211110
Q ss_pred C-----------------------------------------------------------------------CCCCcccc
Q 002883 158 A-----------------------------------------------------------------------SSIPEDLG 166 (871)
Q Consensus 158 ~-----------------------------------------------------------------------~~lp~~~~ 166 (871)
. ..++..+.
T Consensus 224 ~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~ 303 (635)
T 4g8a_A 224 IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFN 303 (635)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTG
T ss_pred hhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhh
Confidence 0 00112233
Q ss_pred CCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCC
Q 002883 167 KLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGN 246 (871)
Q Consensus 167 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~ 246 (871)
.+.+++.+++.+|.+.. ...+.....|+.|++++|.+....+.. ...|+.+++++|.+.. +.....
T Consensus 304 ~~~~l~~l~~~~~~~~~--------~~~~~~~~~L~~L~l~~~~~~~~~~~~----l~~L~~l~l~~n~~~~--~~~~~~ 369 (635)
T 4g8a_A 304 CLTNVSSFSLVSVTIER--------VKDFSYNFGWQHLELVNCKFGQFPTLK----LKSLKRLTFTSNKGGN--AFSEVD 369 (635)
T ss_dssp GGTTCSEEEEESCEEEE--------CGGGGSCCCCSEEEEESCEESSCCCCB----CTTCCEEEEESCCSCC--BCCCCB
T ss_pred hhccccccccccccccc--------ccccccchhhhhhhcccccccCcCccc----chhhhhcccccccCCC--Cccccc
Confidence 44555666666665543 234556778999999999998543332 2469999999999874 334568
Q ss_pred ccccceeecccccccc--cCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCc-ccccCCCCCC
Q 002883 247 LKNLILIAMEVNLLTG--SIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIP-SALGNCLQLQ 323 (871)
Q Consensus 247 l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~ 323 (871)
+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+. ..+..+..+++|+.+++++|.+....+ ..|..+++++
T Consensus 370 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~ 448 (635)
T 4g8a_A 370 LPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 448 (635)
T ss_dssp CTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCC
T ss_pred ccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccc
Confidence 9999999999999863 45666778899999999999998 567778999999999999988775544 5688999999
Q ss_pred EEecCCCcCCCCCcccccCCCCCcEEeccCCCC-CCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCC
Q 002883 324 KLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHL-SGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDN 402 (871)
Q Consensus 324 ~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 402 (871)
.+++++|.+.+..+..+..+++|+.|++++|.+ ....|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 449 ~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N 528 (635)
T 4g8a_A 449 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 528 (635)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCC
Confidence 999999999988899999999999999999985 4457888999999999999999999989999999999999999999
Q ss_pred cccccCccccCCCCCCCEEeCCCCcCCCCCccccccc-ccccEEecCCCcCcccCCCCccccccc---ceeccCCCCCcc
Q 002883 403 SFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTF-RFLQKLNLSFNNLEGEVPSEGVFKNVR---AVSIIGNNKLCG 478 (871)
Q Consensus 403 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-~~L~~L~l~~N~l~~~~~~~~~~~~l~---~l~l~~N~~~C~ 478 (871)
+|+++.+..|.++++|++|||++|+|++..|..+..+ ++|+.|+|++|+|.|.|...+....++ ..........|.
T Consensus 529 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl~~~~~~~~~~~~~~C~ 608 (635)
T 4g8a_A 529 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECA 608 (635)
T ss_dssp CCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHHHHTTTTBSCGGGCBBC
T ss_pred cCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHHHhCCCccCCCCCceeC
Confidence 9999999999999999999999999999999999988 689999999999999886432221121 111122335677
Q ss_pred CCCccc
Q 002883 479 GSPELH 484 (871)
Q Consensus 479 ~~~~~~ 484 (871)
.|+...
T Consensus 609 ~P~~~~ 614 (635)
T 4g8a_A 609 TPSDKQ 614 (635)
T ss_dssp SSTTTT
T ss_pred CchHHC
Confidence 776653
No 44
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.5e-42 Score=369.56 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=208.9
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||+||+|++..+++.||||++........+.+.+|+.+++.++||||+++++++... ...|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC-----CEEE
Confidence 46899999999999999999999989999999999776666677889999999999999999999998765 6689
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL 717 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 717 (871)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 94 lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~ 162 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162 (297)
T ss_dssp EEEECCTTCBHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEECCCCCCHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCC
Confidence 999999999999999754 489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchhh
Q 002883 718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVA 797 (871)
Q Consensus 718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 797 (871)
+....... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||........... ......+..
T Consensus 163 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~~~~~~-- 236 (297)
T 3fxz_A 163 CAQITPEQ---SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-IATNGTPEL-- 236 (297)
T ss_dssp CEECCSTT---CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHHCSCCC--
T ss_pred ceecCCcc---cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhCCCCCC--
Confidence 98765432 223345799999999999999999999999999999999999999975432221111 111111000
Q ss_pred hhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 798 EIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.. ...+...+.+++.+||+.||++|||++|+++
T Consensus 237 --~~-------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 237 --QN-------------------------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp --SC-------------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --CC-------------------------ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00 0022345678999999999999999999986
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.7e-42 Score=388.78 Aligned_cols=372 Identities=18% Similarity=0.179 Sum_probs=237.1
Q ss_pred CCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccC-CccccCCcccceeeccCccccCCCCccccccccccccc
Q 002883 14 SELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSI-PQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQ 92 (871)
Q Consensus 14 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 92 (871)
++|++|||++|.|++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 45677777777776666667777777777777777665333 45567777777777777777655666677777777777
Q ss_pred cccccccCCCCcc--ccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCC--
Q 002883 93 VSANYLTGSIPIQ--LFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKL-- 168 (871)
Q Consensus 93 l~~n~l~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l-- 168 (871)
|++|.+++..+.. +.++++|++|++++|.+.+..|...+..+++|++|++++|.+++..|.. +..+
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~----------l~~l~~ 179 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEED----------LLNFQG 179 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTT----------SGGGTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhh----------hhcccc
Confidence 7777776544433 6666777777777777665555554456677777777777666433322 2222
Q ss_pred CcccEEecccccCCCCCCCCcc--ccccccCCCcccEEEccCCcCcccCChhhhhcc--ccccEEEccCCccCCCCCCCC
Q 002883 169 KNLIRLNFARNNLGTGKGNDLR--FLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFS--SHLIYLYMSANRISGTIPTGV 244 (871)
Q Consensus 169 ~~L~~L~l~~n~l~~~~~~~~~--~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~--~~L~~L~L~~n~i~~~~~~~~ 244 (871)
.+|+.|++++|.+..++...+. ....+..+++|++|++++|++++..|..+.... .+|+.|++++|.+.+..
T Consensus 180 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~---- 255 (455)
T 3v47_A 180 KHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS---- 255 (455)
T ss_dssp CEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC----
T ss_pred ccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc----
Confidence 4666666666666654432211 011233445666666666666655555554431 24555555555443211
Q ss_pred CCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCC--CccccEEEccCccccccCcccccCCCCC
Q 002883 245 GNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGN--LIFLTEVDLQGNSIRGSIPSALGNCLQL 322 (871)
Q Consensus 245 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--l~~L~~L~L~~N~i~~~~~~~~~~l~~L 322 (871)
+ ..+.+....+..+.. .++|++|++++|++++..|..|..+++|
T Consensus 256 ----------~------------------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 301 (455)
T 3v47_A 256 ----------F------------------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDL 301 (455)
T ss_dssp ----------T------------------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred ----------c------------------------chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCC
Confidence 0 111111111222222 2456666666666666666666667777
Q ss_pred CEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCC
Q 002883 323 QKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDN 402 (871)
Q Consensus 323 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 402 (871)
++|+|++|++++..|..|.++++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 302 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 381 (455)
T 3v47_A 302 EQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTN 381 (455)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCC
Confidence 77777777776666666777777777777777776666677777888888888888887777778888888888888888
Q ss_pred cccccCccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 403 SFQGPIHSGFSSLKGLQDLDLSRNNFSGKIP 433 (871)
Q Consensus 403 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 433 (871)
+|++.++..|..+++|++|++++|++++..|
T Consensus 382 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 382 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 8887777778888899999999999987766
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1e-41 Score=387.31 Aligned_cols=389 Identities=18% Similarity=0.172 Sum_probs=292.9
Q ss_pred CceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccccccccCCC-CccccccCCCceeeee
Q 002883 40 LVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLTGSI-PIQLFNISSMDYFAVT 118 (871)
Q Consensus 40 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~ 118 (871)
-+.++.+++.++ .+|. +. ++|++|+|++|.+++..|..|+++++|++|++++|.+.+.+ +..|.++++|++|+|+
T Consensus 12 ~~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 356788888888 6666 33 78899999999988777888888999999999988887444 5567888888888888
Q ss_pred ccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCCccccccccCC
Q 002883 119 QNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNC 198 (871)
Q Consensus 119 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l 198 (871)
+|.+.+..|..+. .+++|++|+|++|.+++.+|.. ..|..+++|++|++++|+++.+.+. ..+..+
T Consensus 88 ~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~--------~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~~l 153 (455)
T 3v47_A 88 YNQFLQLETGAFN-GLANLEVLTLTQCNLDGAVLSG--------NFFKPLTSLEMLVLRDNNIKKIQPA-----SFFLNM 153 (455)
T ss_dssp TCTTCEECTTTTT-TCTTCCEEECTTSCCBTHHHHS--------STTTTCTTCCEEECCSSBCCSCCCC-----GGGGGC
T ss_pred CCccCccChhhcc-CcccCCEEeCCCCCCCccccCc--------ccccCcccCCEEECCCCccCccCcc-----cccCCC
Confidence 8888744454443 7788888888888776322111 1266777777777777777664321 125566
Q ss_pred CcccEEEccCCcCcccCChhhhhcc-ccccEEEccCCccCCCCCCCC--------CCccccceeecccccccccCCcccc
Q 002883 199 TFLEVVSLSSNSLSGVLPNSIANFS-SHLIYLYMSANRISGTIPTGV--------GNLKNLILIAMEVNLLTGSIPTSVG 269 (871)
Q Consensus 199 ~~L~~L~L~~n~l~~~~~~~~~~~~-~~L~~L~L~~n~i~~~~~~~~--------~~l~~L~~L~l~~N~l~~~~~~~~~ 269 (871)
++|++|++++|.+++..|..+..+. .+|+.|++++|.+.+..+..+ ..+++|+.|++++|.+++..|..+.
T Consensus 154 ~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~ 233 (455)
T 3v47_A 154 RRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFF 233 (455)
T ss_dssp TTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHH
T ss_pred CcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhh
Confidence 7777777777777766666665542 357777777777775444332 2456666666666666655555554
Q ss_pred CC---CCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccC--CCCCCEEecCCCcCCCCCcccccCCC
Q 002883 270 YL---LKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGN--CLQLQKLDLSDNNLSGTIPREVIGLS 344 (871)
Q Consensus 270 ~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~ 344 (871)
.+ ++|+.|++++|.+.+.. +..+.+....+..+.. .++|+.|++++|++++..|..+..++
T Consensus 234 ~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 299 (455)
T 3v47_A 234 DAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFT 299 (455)
T ss_dssp HHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCT
T ss_pred ccccccceeeEeeccccccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCC
Confidence 33 56666666666654221 1122222222333333 36899999999999988999999999
Q ss_pred CCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCC
Q 002883 345 SFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLS 424 (871)
Q Consensus 345 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 424 (871)
+|++|++++|.+++..|..|+.+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 300 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 379 (455)
T 3v47_A 300 DLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALD 379 (455)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECC
Confidence 99999999999998888899999999999999999998889999999999999999999999989999999999999999
Q ss_pred CCcCCCCCcccccccccccEEecCCCcCcccCCCCc
Q 002883 425 RNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEG 460 (871)
Q Consensus 425 ~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~ 460 (871)
+|++++..+..+..+++|++|++++|+++|.+|...
T Consensus 380 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 380 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 999998777888999999999999999999998643
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.7e-41 Score=381.84 Aligned_cols=394 Identities=22% Similarity=0.288 Sum_probs=266.9
Q ss_pred CccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCccc-------------ceeeccCcc
Q 002883 7 PANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFL-------------QQLSLSENS 73 (871)
Q Consensus 7 p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~Ls~n~ 73 (871)
|..+. .+.|++|++++|.+ +.+|++|++|++|++|++++|++++.+|.+++++.+| ++|++++|.
T Consensus 5 p~~~~-~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~ 82 (454)
T 1jl5_A 5 PRNVS-NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLG 82 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSC
T ss_pred ccccc-cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCc
Confidence 34444 58899999999999 5999999999999999999999999999999999876 999999999
Q ss_pred ccCCCCccccccccccccccccccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCc
Q 002883 74 LSGNIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPP 153 (871)
Q Consensus 74 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~ 153 (871)
++ .+|.. .++|++|++++|.+++ +|.. +++|++|++++|.+. .+|.. .++|++|++++|.++
T Consensus 83 l~-~lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~----- 144 (454)
T 1jl5_A 83 LS-SLPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLE----- 144 (454)
T ss_dssp CS-CCCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCS-----
T ss_pred cc-cCCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCC-----
Confidence 98 56652 4789999999999995 6653 478999999999887 45432 268999999999887
Q ss_pred cCcCCCCCCccccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccC
Q 002883 154 SISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSA 233 (871)
Q Consensus 154 ~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~ 233 (871)
.+| .|+++++|++|++++|+++.++.. ..+|++|++++|++++ +| .+..+ ++|++|++++
T Consensus 145 ------~lp-~~~~l~~L~~L~l~~N~l~~lp~~----------~~~L~~L~L~~n~l~~-l~-~~~~l-~~L~~L~l~~ 204 (454)
T 1jl5_A 145 ------KLP-ELQNSSFLKIIDVDNNSLKKLPDL----------PPSLEFIAAGNNQLEE-LP-ELQNL-PFLTAIYADN 204 (454)
T ss_dssp ------SCC-CCTTCTTCCEEECCSSCCSCCCCC----------CTTCCEEECCSSCCSS-CC-CCTTC-TTCCEEECCS
T ss_pred ------CCc-ccCCCCCCCEEECCCCcCcccCCC----------cccccEEECcCCcCCc-Cc-cccCC-CCCCEEECCC
Confidence 456 488899999999999999875531 2489999999999985 56 46666 5699999999
Q ss_pred CccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCc
Q 002883 234 NRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIP 313 (871)
Q Consensus 234 n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 313 (871)
|++++ +|... ++|+.|++++|.++ .+| .++.+++|++|++++|++++ +|.. +++|++|++++|++++ +|
T Consensus 205 N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~ 273 (454)
T 1jl5_A 205 NSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LP 273 (454)
T ss_dssp SCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CC
T ss_pred CcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cC
Confidence 99985 44433 58999999999998 566 48899999999999999984 4543 4789999999999985 45
Q ss_pred ccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCC-CCCCEEeCCCCcCCCCCccchhccc
Q 002883 314 SALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRL-KGIQQLDLSENKLSGEIPTSLASCV 392 (871)
Q Consensus 314 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~ 392 (871)
.. +++|+.|++++|++++. |.. .++|+.|++++|.+++ ++ .+ ++|++|++++|++++ +|.. ++
T Consensus 274 ~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~ 337 (454)
T 1jl5_A 274 EL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PP 337 (454)
T ss_dssp CC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CT
T ss_pred cc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CC
Confidence 43 37899999999999852 211 2689999999999984 22 23 589999999999985 5554 57
Q ss_pred CCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCC--CCccccccc-------------ccccEEecCCCcCcc--c
Q 002883 393 GLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSG--KIPMFLNTF-------------RFLQKLNLSFNNLEG--E 455 (871)
Q Consensus 393 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~~-------------~~L~~L~l~~N~l~~--~ 455 (871)
+|++|++++|+++++ |. .+++|++|++++|++++ .+|..+..+ ++|+.|++++|++++ .
T Consensus 338 ~L~~L~L~~N~l~~l-p~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~ 413 (454)
T 1jl5_A 338 RLERLIASFNHLAEV-PE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPD 413 (454)
T ss_dssp TCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC---------------------------
T ss_pred cCCEEECCCCccccc-cc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCcccc
Confidence 899999999999854 43 47889999999999998 678888777 788999999999887 3
Q ss_pred CCCCcccccccceeccCCCCC
Q 002883 456 VPSEGVFKNVRAVSIIGNNKL 476 (871)
Q Consensus 456 ~~~~~~~~~l~~l~l~~N~~~ 476 (871)
+| ..+..+.+.+|...
T Consensus 414 iP-----~sl~~L~~~~~~~~ 429 (454)
T 1jl5_A 414 IP-----ESVEDLRMNSERVV 429 (454)
T ss_dssp ---------------------
T ss_pred ch-----hhHhheeCcCcccC
Confidence 33 23555666555443
No 48
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.3e-42 Score=370.03 Aligned_cols=265 Identities=22% Similarity=0.333 Sum_probs=213.8
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||+||+|++..+++.||+|++........+.+.+|++++++++||||+++++++.+. ...+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD-----KRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC-----CeeE
Confidence 46799999999999999999999999999999998766666678899999999999999999999998765 6689
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL 717 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 717 (871)
+||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 154 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMDS------QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGL 154 (310)
T ss_dssp EEEECCTTCBHHHHHHHCCT------TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTT
T ss_pred EEEEecCCCcHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeeccc
Confidence 99999999999999987432 589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCcc-----------ccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHH
Q 002883 718 SRLLHDNSPDQT-----------STSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHK 786 (871)
Q Consensus 718 a~~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~ 786 (871)
+........... ......||+.|+|||++.+..++.++||||||+++|+|++|..||...........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~- 233 (310)
T 3s95_A 155 ARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG- 233 (310)
T ss_dssp CEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS-
T ss_pred ceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh-
Confidence 987654322110 11135699999999999999999999999999999999999999875322111000
Q ss_pred HhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 787 YAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
.......+ ...+ ..++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 234 -------~~~~~~~~---------------~~~~-------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 234 -------LNVRGFLD---------------RYCP-------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp -------BCHHHHHH---------------HTCC-------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------hhhhcccc---------------ccCC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 00000000 0000 122345778999999999999999999999999887653
No 49
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.3e-42 Score=373.03 Aligned_cols=264 Identities=26% Similarity=0.404 Sum_probs=210.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCc---EEEEEEeecc-ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEET---NVAVKVLDLQ-QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
.++|++.+.||+|+||+||+|++..+++ .||||+++.. .....+.+.+|+++++.++||||+++++++.+.
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG----- 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG-----
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----
Confidence 3579999999999999999999975544 5999999654 333456789999999999999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...|+||||+++|+|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~ 193 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTHDG------QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVS 193 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTTTT------CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred CccEEEeeCCCCCcHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEEC
Confidence 668999999999999999976432 589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
|||++.................+|+.|+|||++.+..++.++|||||||++|+|++ |+.||.......... ......
T Consensus 194 Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~--~~~~~~ 271 (325)
T 3kul_A 194 DFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS--SVEEGY 271 (325)
T ss_dssp CCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH--HHHTTC
T ss_pred CCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH--HHHcCC
Confidence 99999987654333333334456788999999988899999999999999999999 999997643322111 111100
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQ 867 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~~ 867 (871)
..... ..++..+.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 272 ~~~~~------------------------------~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 272 RLPAP------------------------------MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp CCCCC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred CCCCC------------------------------CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 00000 0223457789999999999999999999999999876543
No 50
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.1e-42 Score=374.44 Aligned_cols=287 Identities=34% Similarity=0.596 Sum_probs=225.7
Q ss_pred ccccCHHHHHHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHcCCCCccceeeee
Q 002883 546 YLKISYAELLKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITS 624 (871)
Q Consensus 546 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~ 624 (871)
...++..++....++|++.+.||+|+||.||+|++. +++.||||++..... .....+.+|+++++.++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 345788899999999999999999999999999865 689999999964432 223468899999999999999999999
Q ss_pred ecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee
Q 002883 625 CSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704 (871)
Q Consensus 625 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill 704 (871)
+... ...++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+.+.++|+||||||+||++
T Consensus 96 ~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~ 167 (326)
T 3uim_A 96 CMTP-----TERLLVYPYMANGSVASCLRERPES---QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 167 (326)
T ss_dssp ECCS-----SCCEEEEECCTTCBHHHHHHCCSTT---CCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE
T ss_pred EecC-----CceEEEEEeccCCCHHHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE
Confidence 8765 5679999999999999999875432 3358999999999999999999999866799999999999999
Q ss_pred CCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhh---h
Q 002883 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEE---G 781 (871)
Q Consensus 705 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~---~ 781 (871)
+.++.+||+|||.+....... ........||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 245 (326)
T 3uim_A 168 DEEFEAVVGDFGLAKLMDYKD--THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245 (326)
T ss_dssp CTTCCEEECCCSSCEECCSSS--SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSC
T ss_pred CCCCCEEeccCccccccCccc--ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccc
Confidence 999999999999998765432 22233456999999999988888999999999999999999999999743221 1
Q ss_pred hhHHHHhhhCCCc-hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHH
Q 002883 782 LSLHKYAKMGLPD-QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQ 860 (871)
Q Consensus 782 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~ 860 (871)
.....+....... ......+..... .........+.+++.+||+.||++|||+.|+++.|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 307 (326)
T 3uim_A 246 VMLLDWVKGLLKEKKLEALVDVDLQG------------------NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307 (326)
T ss_dssp SBHHHHHTTTTSSCCSTTSSCTTCTT------------------SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred hhHHHHHHHHhhchhhhhhcChhhcc------------------ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence 1222222221111 122222221111 111245667899999999999999999999999997
Q ss_pred H
Q 002883 861 E 861 (871)
Q Consensus 861 ~ 861 (871)
+
T Consensus 308 ~ 308 (326)
T 3uim_A 308 G 308 (326)
T ss_dssp T
T ss_pred C
Confidence 4
No 51
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.5e-42 Score=371.67 Aligned_cols=281 Identities=30% Similarity=0.486 Sum_probs=220.5
Q ss_pred HHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 555 LKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 555 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
....++|++.+.||+|+||.||+|++. +++.||||++........+.+.+|+++++.++||||+++++++.+. .
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~ 108 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER-----N 108 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT-----T
T ss_pred HHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-----C
Confidence 345689999999999999999999975 6899999999766666678899999999999999999999998654 5
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 182 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLP---TMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITD 182 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCC---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECC
T ss_pred eEEEEEEcCCCCcHHHHHhccCCC---ccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEee
Confidence 689999999999999999764321 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhh-hhHHHHhhh-CC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG-LSLHKYAKM-GL 792 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~-~~~~~~~~~-~~ 792 (871)
||.+........ ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+... ..
T Consensus 183 fg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 261 (321)
T 2qkw_B 183 FGISKKGTELDQ-THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261 (321)
T ss_dssp CTTCEECSSSSC-CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT
T ss_pred cccccccccccc-cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc
Confidence 999987543221 122233568999999999888899999999999999999999999997533221 111111100 00
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
........++... ..........+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 262 ~~~~~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 262 NGQLEQIVDPNLA------------------DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp TTCCCSSSSSSCT------------------TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred cccHHHhcChhhc------------------cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 0011111111110 0111245667889999999999999999999999999987654
No 52
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.5e-42 Score=370.13 Aligned_cols=249 Identities=20% Similarity=0.284 Sum_probs=204.8
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
..++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~ 87 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE-----K 87 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----C
Confidence 3468999999999999999999998899999999996542 23456788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~-------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~D 157 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLVAHG-------RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIAD 157 (328)
T ss_dssp EEEEEECCCTTCBHHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECS
T ss_pred EEEEEEECCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEee
Confidence 7899999999999999997654 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCC-CccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVS-THGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
||++...... .......||+.|+|||++.+..+. +++||||+||++|+|++|+.||......... .........
T Consensus 158 FG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~i~~~~~~ 232 (328)
T 3fe3_A 158 FGFSNEFTVG----GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-ERVLRGKYR 232 (328)
T ss_dssp TTCCGGGSSS----CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHCCCC
T ss_pred ccCceecCCC----CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH-HHHHhCCCC
Confidence 9999866432 223445799999999998887775 8999999999999999999999754322111 111111000
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
... .....+.+++.+||+.||++|||++|+++
T Consensus 233 --~p~------------------------------~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 233 --IPF------------------------------YMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp --CCT------------------------------TSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred --CCC------------------------------CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000 11234678999999999999999999976
No 53
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.5e-42 Score=364.97 Aligned_cols=280 Identities=23% Similarity=0.328 Sum_probs=211.8
Q ss_pred hcCCCCCceeeccccceEEEEE----ECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGI----LGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
.++|++.+.||+|+||+||+|+ +..+++.||||++........+.+.+|++++++++||||+++++++...+.
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--- 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR--- 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH---
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC---
Confidence 4689999999999999999999 456789999999976666666789999999999999999999998865322
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~ 156 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIG 156 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGG------GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred CceEEEEEeCCCCCHHHHHHhccc------ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEc
Confidence 457999999999999999987543 489999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||++.................++..|+|||.+.+..++.++||||||+++|+|++|..||.....+... .......
T Consensus 157 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~---~~~~~~~ 233 (295)
T 3ugc_A 157 DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR---MIGNDKQ 233 (295)
T ss_dssp CCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHH---HHCTTCC
T ss_pred cCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHh---hhcCccc
Confidence 9999987754432223333445778899999999899999999999999999999999999754332111 1000000
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
.. ........ ......... ....++.++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 234 ~~-------~~~~~~~~---~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 234 GQ-------MIVFHLIE---LLKNNGRLP---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TH-------HHHHHHHH---HHHTTCCCC---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cc-------hhHHHHHH---HHhccCcCC---CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 00 00000000 000000000 0113345788999999999999999999999999998764
No 54
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.5e-42 Score=372.02 Aligned_cols=251 Identities=23% Similarity=0.331 Sum_probs=197.2
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|+++++.++||||+++++++... ...
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-----~~~ 83 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETA-----NKI 83 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECS-----SEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeC-----CEE
Confidence 5789999999999999999999999999999999965432 2345788999999999999999999998765 678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
++||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 84 ~lv~E~~~gg~L~~~l~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG 153 (347)
T 3zgw_A 84 FMVLEYCPGGELFDYIISQD-------RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFG 153 (347)
T ss_dssp EEEEECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEecc
Confidence 99999999999999997654 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
+|....... ........||+.|+|||++.+..+ +.++||||+||++|+|++|+.||........ ..........
T Consensus 154 ~a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~~-- 228 (347)
T 3zgw_A 154 LCAKPKGNK--DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL-YKKIMRGKYD-- 228 (347)
T ss_dssp TCBC----------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCC--
T ss_pred CcccccCCC--CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcCCCC--
Confidence 997654322 122334579999999999887776 8999999999999999999999975322211 1111111100
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
... .....+.+++.+||+.||++|||++|+++.
T Consensus 229 ~p~------------------------------~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 229 VPK------------------------------WLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp CCT------------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCC------------------------------CCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 000 112345689999999999999999999864
No 55
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2e-41 Score=369.30 Aligned_cols=252 Identities=22% Similarity=0.307 Sum_probs=206.5
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccc------hHHHHHHHHHHHHcCCCCccceeeeeecccCcC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRG------ASKSFIAECEALRSIRHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 631 (871)
.++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--- 87 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR--- 87 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS---
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC---
Confidence 46799999999999999999999999999999999654321 346789999999999999999999998765
Q ss_pred CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC---
Q 002883 632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM--- 708 (871)
Q Consensus 632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~--- 708 (871)
...|+||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||+++.++
T Consensus 88 --~~~~lv~e~~~gg~L~~~l~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~ 155 (361)
T 2yab_A 88 --TDVVLILELVSGGELFDFLAQKE-------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPI 155 (361)
T ss_dssp --SEEEEEEECCCSCBHHHHHTTCS-------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSS
T ss_pred --CEEEEEEEcCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCc
Confidence 67899999999999999997643 589999999999999999999999 999999999999998776
Q ss_pred -ceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHH
Q 002883 709 -VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKY 787 (871)
Q Consensus 709 -~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~ 787 (871)
.+||+|||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||........ ....
T Consensus 156 ~~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~-~~~i 230 (361)
T 2yab_A 156 PHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANI 230 (361)
T ss_dssp CCEEECCCSSCEECCTTC----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHH
T ss_pred cCEEEEecCCceEcCCCC----ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence 79999999998775432 22335699999999999988999999999999999999999999975432211 1111
Q ss_pred hhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 788 AKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
....... ++ ..+..+...+.+++.+||..||++|||+.|+++
T Consensus 231 ~~~~~~~------~~----------------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 231 TAVSYDF------DE----------------------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HTTCCCC------CH----------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhcCCCC------Cc----------------------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111000 00 111133456789999999999999999999985
No 56
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-41 Score=365.74 Aligned_cols=253 Identities=22% Similarity=0.314 Sum_probs=208.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||+||+|++..+++.||+|++.... .....+.+|+++++.++||||+++++++.+. ...+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESM-----EELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEET-----TEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecC-----CEEE
Confidence 468999999999999999999999999999999997543 2446788999999999999999999998765 6789
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC--CCceEEeec
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN--EMVAHVGDF 715 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~--~~~~kl~Df 715 (871)
+||||+++|+|.+++..... .+++.+++.++.|++.||.|||+. +|+||||||+||+++. ++.+||+||
T Consensus 78 lv~e~~~g~~L~~~l~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Df 148 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSAF------ELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEF 148 (321)
T ss_dssp EEECCCCCCBHHHHHTSSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred EEEEeCCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEEC
Confidence 99999999999999976432 589999999999999999999999 9999999999999987 789999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
|.+...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||........ ...........
T Consensus 149 g~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~- 222 (321)
T 1tki_A 149 GQARQLKPG----DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI-IENIMNAEYTF- 222 (321)
T ss_dssp TTCEECCTT----CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCCCC-
T ss_pred CCCeECCCC----CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH-HHHHHcCCCCC-
Confidence 999877543 223345689999999999888899999999999999999999999975432211 11111111100
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
....+..++.++.+++.+||..||++|||+.|+++.
T Consensus 223 ---------------------------~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 223 ---------------------------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ---------------------------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---------------------------ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 001112344567899999999999999999999874
No 57
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.8e-42 Score=369.70 Aligned_cols=284 Identities=23% Similarity=0.293 Sum_probs=211.5
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||+||+|++. ++.||||++..... ......+|+.++++++||||+++++++.... ......+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceEE
Confidence 468999999999999999999985 78999999965433 3345667899999999999999999987642 2235679
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC-------CCCeEecCCCCCceeeCCCCce
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-------HTSIVHCDLKPSNVLLDNEMVA 710 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~~~ivH~Dlkp~Nill~~~~~~ 710 (871)
+||||+++|+|.++++.. .+++..++.++.|++.||+|||+.. ..+|+||||||+||+++.++.+
T Consensus 99 lv~e~~~~g~L~~~l~~~--------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN--------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp EEEECCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred EEEecCCCCCHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeE
Confidence 999999999999999753 4899999999999999999999851 2389999999999999999999
Q ss_pred EEeecccceecCCCCCCccccccccccccccCcccccCC-----CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHH
Q 002883 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-----EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLH 785 (871)
Q Consensus 711 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~ 785 (871)
||+|||+|+........ .......||+.|+|||++.+. .++.++|||||||++|||+||+.||...........
T Consensus 171 kL~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~ 249 (322)
T 3soc_A 171 CIADFGLALKFEAGKSA-GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF 249 (322)
T ss_dssp EECCCTTCEEECTTSCC-CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTT
T ss_pred EEccCCcccccccccCc-cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccch
Confidence 99999999877654322 223335699999999987763 456788999999999999999999975432211110
Q ss_pred HHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHh--HHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHH
Q 002883 786 KYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAK--FHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQ 863 (871)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~ 863 (871)
.......+. . ....... ......+..... ......++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 250 ~~~~~~~~~---------~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 250 EEEIGQHPS---------L-EDMQEVV--VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp HHHHCSSCC---------H-HHHHHHH--TTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhhccCCc---------h-hhhhhhh--hcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000000000 0 0000000 001111111111 1134567899999999999999999999999999997
Q ss_pred HHH
Q 002883 864 KMR 866 (871)
Q Consensus 864 ~~~ 866 (871)
+..
T Consensus 318 ~~~ 320 (322)
T 3soc_A 318 RLT 320 (322)
T ss_dssp HHC
T ss_pred HHh
Confidence 653
No 58
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=7.6e-41 Score=360.46 Aligned_cols=262 Identities=23% Similarity=0.316 Sum_probs=212.4
Q ss_pred ccCHHHHHHhhcC----------CCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCc
Q 002883 548 KISYAELLKATEG----------FSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRN 617 (871)
Q Consensus 548 ~~~~~~~~~~~~~----------y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 617 (871)
.++++++..+.+. |+..+.||+|+||+||+|++..+++.||||++........+.+.+|+.+++.++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4566666665543 677789999999999999999899999999997766666778999999999999999
Q ss_pred cceeeeeecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 002883 618 LVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697 (871)
Q Consensus 618 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 697 (871)
|+++++++... ...++||||+++++|.+++... .+++..+..++.|++.||.|||+. +|+||||
T Consensus 104 iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~--------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl 167 (321)
T 2c30_A 104 VVEMYKSYLVG-----EELWVLMEFLQGGALTDIVSQV--------RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDI 167 (321)
T ss_dssp BCCEEEEEEET-----TEEEEEECCCCSCBHHHHHTTC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred cceEEEEEEEC-----CEEEEEEecCCCCCHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence 99999998765 5689999999999999998653 489999999999999999999999 9999999
Q ss_pred CCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchh
Q 002883 698 KPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM 777 (871)
Q Consensus 698 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 777 (871)
||+||+++.++.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 168 kp~NIll~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~ 244 (321)
T 2c30_A 168 KSDSILLTLDGRVKLSDFGFCAQISKDVP---KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD 244 (321)
T ss_dssp SGGGEEECTTCCEEECCCTTCEECCSSSC---CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CHHHEEECCCCcEEEeeeeeeeecccCcc---ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999987654321 223457999999999999999999999999999999999999999753
Q ss_pred hhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 778 FEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
..... .... ....++... ........+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~-~~~~-~~~~~~~~~----------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 245 SPVQA-MKRL-RDSPPPKLK----------------------------NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp CHHHH-HHHH-HHSSCCCCT----------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CHHHH-HHHH-hcCCCCCcC----------------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 22211 1111 111110000 00122345778999999999999999999987
Q ss_pred H
Q 002883 858 E 858 (871)
Q Consensus 858 ~ 858 (871)
.
T Consensus 295 h 295 (321)
T 2c30_A 295 H 295 (321)
T ss_dssp S
T ss_pred C
Confidence 3
No 59
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.7e-41 Score=363.07 Aligned_cols=267 Identities=24% Similarity=0.335 Sum_probs=203.2
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHc--CCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRS--IRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||+||+|++ +++.||||++.... ...+.+|.+++.. ++||||+++++++... ......
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTS-RHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCce
Confidence 46899999999999999999998 58899999986432 3556667777766 7999999999987653 223466
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEecCCCCCceeeCCC
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLH--------HHCHTSIVHCDLKPSNVLLDNE 707 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~Nill~~~ 707 (871)
.++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.+
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~ 149 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT--------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKN 149 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC--------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTT
T ss_pred eEEehhhccCCCHHHHHhhc--------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCC
Confidence 89999999999999999643 4899999999999999999999 77 99999999999999999
Q ss_pred CceEEeecccceecCCCCCCcc-ccccccccccccCcccccCC------CCCCccchhhHHHHHHHHHhC----------
Q 002883 708 MVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALG------EVSTHGDEYSFGILMLEMFTG---------- 770 (871)
Q Consensus 708 ~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltG---------- 770 (871)
+.+||+|||+|........... ......||+.|+|||++.+. .+++++|||||||++|||++|
T Consensus 150 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~ 229 (301)
T 3q4u_A 150 GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 229 (301)
T ss_dssp SCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccc
Confidence 9999999999987654322111 12234799999999988766 455799999999999999999
Q ss_pred CCCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC
Q 002883 771 KRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM 850 (871)
Q Consensus 771 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 850 (871)
+.||............................. .........+.+++.+||+.||++||
T Consensus 230 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~cl~~dP~~Rp 288 (301)
T 3q4u_A 230 KPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNR---------------------WFSDPTLTSLAKLMKECWYQNPSARL 288 (301)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG---------------------GGGSHHHHHHHHHHHHHCCSSGGGSC
T ss_pred cccccccCCCCcchhhhhHHHhccCCCCCCChh---------------------hccCccHHHHHHHHHHHhhcChhhCC
Confidence 778765432221111111100000000000000 01113456788999999999999999
Q ss_pred CHHHHHHHHHHH
Q 002883 851 KIQDAIMELQEA 862 (871)
Q Consensus 851 ta~evl~~L~~i 862 (871)
|+.|+++.|+++
T Consensus 289 s~~~i~~~L~~i 300 (301)
T 3q4u_A 289 TALRIKKTLTKI 300 (301)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHhcc
Confidence 999999999986
No 60
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.3e-41 Score=362.26 Aligned_cols=262 Identities=26% Similarity=0.367 Sum_probs=201.8
Q ss_pred HhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 556 KATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 556 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
...++|++.+.||+|+||+||+|++ .++.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----- 106 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP----- 106 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST-----
T ss_pred CChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----
Confidence 4457899999999999999999988 57889999986443 23346788999999999999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCceeeCCCCceE
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS--IVHCDLKPSNVLLDNEMVAH 711 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~k 711 (871)
...++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~k 179 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAR----EQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVK 179 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHH----HHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEE
T ss_pred CceEEEEecCCCCcHHHHHhhcCCC----CCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEE
Confidence 5689999999999999999765321 1489999999999999999999999 8 99999999999999999999
Q ss_pred EeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
|+|||+++..... ........||+.|+|||++.+..++.++|||||||++|+|++|+.||............ ....
T Consensus 180 L~Dfg~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~-~~~~ 255 (309)
T 3p86_A 180 VCDFGLSRLKAST---FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV-GFKC 255 (309)
T ss_dssp ECCCC--------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH-HHSC
T ss_pred ECCCCCCcccccc---ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhcC
Confidence 9999999865432 12223456999999999999999999999999999999999999999864332211111 0000
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
....... .+..++.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 256 ~~~~~~~------------------------------~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 256 KRLEIPR------------------------------NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp CCCCCCT------------------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred CCCCCCc------------------------------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0000000 1234567899999999999999999999999988653
No 61
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.2e-41 Score=364.37 Aligned_cols=250 Identities=20% Similarity=0.283 Sum_probs=205.3
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||+||+|++..+++.||+|+++.. .......+.+|+++++.++||||+++++++.+. .
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-----D 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS-----S
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC-----C
Confidence 46799999999999999999999999999999999643 233456788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~D 148 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRER-------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITD 148 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEee
Confidence 7899999999999999997643 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||+|+..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..........
T Consensus 149 FG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~~- 223 (337)
T 1o6l_A 149 FGLCKEGISD---GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-FELILMEEIR- 223 (337)
T ss_dssp CTTCBCSCCT---TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCC-
T ss_pred ccchhhcccC---CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH-HHHHHcCCCC-
Confidence 9999864322 1223345799999999999999999999999999999999999999975322211 1111110000
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-----CHHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-----KIQDAIME 858 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----ta~evl~~ 858 (871)
. + .....++.+++.+||+.||++|| +++|+++.
T Consensus 224 -~-----------------------p-------~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 224 -F-----------------------P-------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -C-----------------------C-------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -C-----------------------C-------CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0 0 01234567899999999999999 89998763
No 62
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.8e-41 Score=360.78 Aligned_cols=261 Identities=23% Similarity=0.375 Sum_probs=206.9
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+. .
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-----~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED-----D 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS-----S
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC-----C
Confidence 368999999999999999999999899999999985432 23346788999999999999999999998665 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~D 154 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHG-------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFD 154 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred eEEEEEeCCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEe
Confidence 7899999999999999997654 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||.+....... ........||+.|+|||.+.+..++.++||||+|+++|+|++|+.||............ .....+.
T Consensus 155 fg~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~-~~~~~~~ 231 (294)
T 4eqm_A 155 FGIAKALSETS--LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH-IQDSVPN 231 (294)
T ss_dssp CSSSTTC---------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH-HSSCCCC
T ss_pred CCCcccccccc--ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-hhccCCC
Confidence 99998664322 12233456999999999999999999999999999999999999999864332221111 1111111
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-CHHHHHHHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-KIQDAIMELQEAQ 863 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-ta~evl~~L~~i~ 863 (871)
... .....++..+.+++.+|++.||++|| +++++.+.|+++.
T Consensus 232 ~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 232 VTT---------------------------DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp HHH---------------------------HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred cch---------------------------hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 100 00112345677999999999999999 8999999998764
No 63
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-41 Score=373.23 Aligned_cols=263 Identities=25% Similarity=0.441 Sum_probs=198.6
Q ss_pred hcCCCCCceeeccccceEEEEEEC---CCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILG---TEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
..+|++.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 118 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS----- 118 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-----
Confidence 357999999999999999999986 467789999996543 33456789999999999999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...++||||+++|+|.+++..... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 119 ~~~~lv~e~~~~~sL~~~l~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~ 189 (373)
T 2qol_A 119 KPVMIVTEYMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189 (373)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTT------CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEEC
T ss_pred CceEEEEeCCCCCcHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEEC
Confidence 568999999999999999976532 589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
|||+++................+++.|+|||++.+..++.++|||||||++|||++ |+.||........ ........
T Consensus 190 Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~--~~~i~~~~ 267 (373)
T 2qol_A 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--IKAVDEGY 267 (373)
T ss_dssp CC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH--HHHHHTTE
T ss_pred cCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcCC
Confidence 99999876543222222222345778999999988999999999999999999998 9999975432211 11111000
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
... . ...++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 268 ~~~-------------------------~-----~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 268 RLP-------------------------P-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp ECC-------------------------C-----CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred CCC-------------------------C-----CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 000 0 0022346779999999999999999999999999987643
No 64
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.7e-41 Score=369.96 Aligned_cols=269 Identities=23% Similarity=0.368 Sum_probs=212.8
Q ss_pred hcCCCCCceeeccccceEEEEEEC-------CCCcEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCccceeeeeeccc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILG-------TEETNVAVKVLDLQQ-RGASKSFIAECEALRSI-RHRNLVKIITSCSSI 628 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 628 (871)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+++++.+ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467999999999999999999974 345679999996543 23456789999999999 899999999998765
Q ss_pred CcCCCceeeEEEeccCCCCHHHHhhccccc---------ccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 002883 629 DTRGNEFKALVYEFMPNGSLENWLNQKEDE---------QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699 (871)
Q Consensus 629 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 699 (871)
...|+||||+++|+|.+++...... ......+++.+++.++.||+.||+|||+. +|+||||||
T Consensus 160 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 160 -----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp -----SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred -----CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 5689999999999999999875421 00122589999999999999999999999 999999999
Q ss_pred CceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhh
Q 002883 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMF 778 (871)
Q Consensus 700 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~ 778 (871)
+||+++.++.+||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~ 310 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTT-CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hhEEECCCCCEEEccccCCcccCcccce-ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999999999999999999876543221 22233457889999999989999999999999999999999 999997543
Q ss_pred hhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 779 EEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
.... ............. ..+...+.+++.+||+.||++|||+.|+++.
T Consensus 311 ~~~~--~~~~~~~~~~~~~------------------------------~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 311 VEEL--FKLLKEGHRMDKP------------------------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp GGGH--HHHHHTTCCCCCC------------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHH--HHHHhcCCCCCCC------------------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2211 1111111000000 0223457789999999999999999999999
Q ss_pred HHHHHHHHH
Q 002883 859 LQEAQKMRQ 867 (871)
Q Consensus 859 L~~i~~~~~ 867 (871)
|+.+.....
T Consensus 359 L~~il~~~~ 367 (370)
T 2psq_A 359 LDRILTLTT 367 (370)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999987653
No 65
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.9e-42 Score=376.77 Aligned_cols=263 Identities=26% Similarity=0.395 Sum_probs=211.0
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
..++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++... ..
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~ 186 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-----QP 186 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS-----SS
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC-----CC
Confidence 3467899999999999999999999899999999986442 22345688999999999999999999998665 56
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.|+||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 187 ~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~Df 257 (377)
T 3cbl_A 187 IYIVMELVQGGDFLTFLRTEGA------RLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDF 257 (377)
T ss_dssp CEEEEECCTTCBHHHHHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCG
T ss_pred cEEEEEcCCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcC
Confidence 8999999999999999976542 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
|+++...... .........++..|+|||.+.++.++.++|||||||++|||++ |+.||........ ..........
T Consensus 258 G~s~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~--~~~~~~~~~~ 334 (377)
T 3cbl_A 258 GMSREEADGV-YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT--REFVEKGGRL 334 (377)
T ss_dssp GGCEECTTSE-EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH--HHHHHTTCCC
T ss_pred CCceecCCCc-eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcCCCC
Confidence 9998654321 1111112235778999999988899999999999999999998 9999986433211 1111111000
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
... ..++..+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 335 ~~~------------------------------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 335 PCP------------------------------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp CCC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCC------------------------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 000 012345778999999999999999999999999997643
No 66
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=5.7e-41 Score=366.07 Aligned_cols=255 Identities=20% Similarity=0.277 Sum_probs=205.3
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-----RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|+++++.++||||+++++++.+.
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~----- 98 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD----- 98 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----
Confidence 57999999999999999999999999999999985432 12357789999999999999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc---e
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV---A 710 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~ 710 (871)
...|+||||+++++|.+++...... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++. +
T Consensus 99 ~~~~lv~e~~~g~~L~~~l~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 99 GMLYMVFEFMDGADLCFEIVKRADA---GFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp TEEEEEEECCSSCBHHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred CEEEEEEeCCCCCCHHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 6789999999999999888654321 22589999999999999999999999 9999999999999986654 9
Q ss_pred EEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh
Q 002883 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790 (871)
Q Consensus 711 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~ 790 (871)
||+|||++....... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ........
T Consensus 173 kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~i~~~ 247 (351)
T 3c0i_A 173 KLGGFGVAIQLGESG---LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER--LFEGIIKG 247 (351)
T ss_dssp EECCCTTCEECCTTS---CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH--HHHHHHHT
T ss_pred EEecCcceeEecCCC---eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH--HHHHHHcC
Confidence 999999998775432 1223456999999999999889999999999999999999999999863221 11111111
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
..... ...+..+..++.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~----------------------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 248 KYKMN----------------------------PRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCCCC----------------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCC----------------------------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11000 0111133456789999999999999999999986
No 67
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2e-41 Score=365.14 Aligned_cols=255 Identities=24% Similarity=0.330 Sum_probs=204.2
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+. ...
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-----NIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECS-----SEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----CeE
Confidence 4689999999999999999999999999999999964432 2346688999999999999999999998765 678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
|+||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg 150 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDI-------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFG 150 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTT-------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEee
Confidence 99999999999999997643 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
++....... .........||+.|+|||++.+..+ +.++||||+||++|+|++|+.||............+........
T Consensus 151 ~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 229 (323)
T 3tki_A 151 LATVFRYNN-RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN 229 (323)
T ss_dssp TCEECEETT-EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTST
T ss_pred ccceeccCC-cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCC
Confidence 998764322 1122334579999999999877766 78899999999999999999999754333222222222111100
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
. ...+...+.+++.+||+.||++|||+.|+++.
T Consensus 230 ~------------------------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 P------------------------------WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp T------------------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred c------------------------------cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 01223456789999999999999999999763
No 68
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.4e-41 Score=361.92 Aligned_cols=251 Identities=21% Similarity=0.296 Sum_probs=205.3
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc------chHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR------GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 86 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK---- 86 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC----
Confidence 568999999999999999999999999999999964432 1357789999999999999999999998765
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC----
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM---- 708 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---- 708 (871)
...++||||+++++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++
T Consensus 87 -~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 155 (326)
T 2y0a_A 87 -TDVILILELVAGGELFDFLAEKE-------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKP 155 (326)
T ss_dssp -SEEEEEEECCCSCBHHHHHTTSS-------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSC
T ss_pred -CEEEEEEEcCCCCCHHHHHHhcC-------CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCC
Confidence 67899999999999999997643 589999999999999999999999 999999999999998887
Q ss_pred ceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHh
Q 002883 709 VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYA 788 (871)
Q Consensus 709 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~ 788 (871)
.+||+|||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||........ .....
T Consensus 156 ~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~ 230 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANVS 230 (326)
T ss_dssp CEEECCCTTCEECCTTS----CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHH
T ss_pred CEEEEECCCCeECCCCC----ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHH
Confidence 89999999998775332 12335699999999999888999999999999999999999999975332211 11111
Q ss_pred hhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 789 KMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...... ....+......+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~----------------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 231 AVNYEF----------------------------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HTCCCC----------------------------CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hcCCCc----------------------------CccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 110000 00111123456779999999999999999999987
No 69
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5.6e-41 Score=359.08 Aligned_cols=263 Identities=25% Similarity=0.415 Sum_probs=203.7
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
..++|++.+.||+|+||.||+|++.. .+|+|+++... ....+.+.+|++++++++||||+++++++.. .
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~ 104 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------D 104 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------S
T ss_pred cccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc------C
Confidence 34689999999999999999998753 58999886433 2345678999999999999999999998643 3
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..++||||+++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 175 (307)
T 3lb7_A 105 NLAIVTQWCEGSSLYKHLHVQET------KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGD 175 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSCC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECC
T ss_pred cEEEEEecCCCCcHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEcc
Confidence 47899999999999999975432 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA---LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
||+|....... .........||+.|+|||++. +..++.++|||||||++|||++|+.||.................
T Consensus 176 Fg~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~ 254 (307)
T 3lb7_A 176 FGLATVKSRWS-GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGY 254 (307)
T ss_dssp CCSSCC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTC
T ss_pred CCCceeccccc-ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCC
Confidence 99998654321 122233456999999999875 66789999999999999999999999975433322221111111
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
.++..... ...++..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 255 ~~~~~~~~---------------------------~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 255 ASPDLSKL---------------------------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp CCCCSTTS---------------------------CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred CCcchhhh---------------------------hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 11111111 112345677999999999999999999999999988754
No 70
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.3e-41 Score=377.01 Aligned_cols=259 Identities=22% Similarity=0.265 Sum_probs=207.2
Q ss_pred HHHHHHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecc
Q 002883 551 YAELLKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSS 627 (871)
Q Consensus 551 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 627 (871)
+.++....++|++.++||+|+||+||+|++..+++.||+|+++... ......+.+|+.++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3445556789999999999999999999999899999999996432 1223347889999999999999999999876
Q ss_pred cCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC
Q 002883 628 IDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE 707 (871)
Q Consensus 628 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 707 (871)
. ...|+||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|||++.+
T Consensus 146 ~-----~~~~lV~Ey~~gg~L~~~l~~~~~------~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~ 211 (437)
T 4aw2_A 146 D-----NNLYLVMDYYVGGDLLTLLSKFED------RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMN 211 (437)
T ss_dssp S-----SEEEEEECCCTTCBHHHHHHTTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred C-----CEEEEEEecCCCCcHHHHHHHccC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCC
Confidence 5 678999999999999999976432 599999999999999999999999 99999999999999999
Q ss_pred CceEEeecccceecCCCCCCccccccccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhh
Q 002883 708 MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA-----LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGL 782 (871)
Q Consensus 708 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~ 782 (871)
+.+||+|||+|+...... .......+||+.|+|||++. .+.++.++||||+||++|||++|+.||........
T Consensus 212 g~vkL~DFGla~~~~~~~--~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~ 289 (437)
T 4aw2_A 212 GHIRLADFGSCLKLMEDG--TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289 (437)
T ss_dssp SCEEECCCTTCEECCTTS--CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred CCEEEcchhhhhhcccCC--CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH
Confidence 999999999998765432 22233457999999999876 56789999999999999999999999975432211
Q ss_pred hHHHHhh----hCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCC--CCCHHHHH
Q 002883 783 SLHKYAK----MGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRD--RMKIQDAI 856 (871)
Q Consensus 783 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPta~evl 856 (871)
...... ..+|... ..+..++.+++.+||..+|++ ||+++|++
T Consensus 290 -~~~i~~~~~~~~~p~~~-------------------------------~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil 337 (437)
T 4aw2_A 290 -YGKIMNHKERFQFPTQV-------------------------------TDVSENAKDLIRRLICSREHRLGQNGIEDFK 337 (437)
T ss_dssp -HHHHHTHHHHCCCCSSC-------------------------------CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHH
T ss_pred -HHhhhhccccccCCccc-------------------------------ccCCHHHHHHHHHHhcccccccCCCCHHHHh
Confidence 111110 0111100 012345678999999888888 99999987
Q ss_pred H
Q 002883 857 M 857 (871)
Q Consensus 857 ~ 857 (871)
+
T Consensus 338 ~ 338 (437)
T 4aw2_A 338 K 338 (437)
T ss_dssp T
T ss_pred C
Confidence 6
No 71
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.5e-40 Score=372.38 Aligned_cols=380 Identities=23% Similarity=0.289 Sum_probs=278.0
Q ss_pred cccCccCcCCCCCCEEecCCCcccccCCccccCCCcC-------------ceeeCCCCcccccCCccccCCcccceeecc
Q 002883 4 GEIPANITHCSELRILDLVVNKLEGNIPSELGNLFKL-------------VGLGLTGNNYTGSIPQSLSNLSFLQQLSLS 70 (871)
Q Consensus 4 ~~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L-------------~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 70 (871)
|+||++|++|++|++|++++|++++.+|.+++++.+| ++|++++|.++ .+|.. .++|++|+++
T Consensus 24 ~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~lp~~---~~~L~~L~l~ 99 (454)
T 1jl5_A 24 TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLPEL---PPHLESLVAS 99 (454)
T ss_dssp ----------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CCCSC---CTTCSEEECC
T ss_pred hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cCCCC---cCCCCEEEcc
Confidence 8999999999999999999999999999999999976 99999999999 45552 3799999999
Q ss_pred CccccCCCCccccccccccccccccccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCC
Q 002883 71 ENSLSGNIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGE 150 (871)
Q Consensus 71 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~ 150 (871)
+|.+++ +|.. +++|++|++++|++++ ++.. .++|++|++++|++. .+|. +..+++|++|++++|+++
T Consensus 100 ~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~-~lp~--~~~l~~L~~L~l~~N~l~-- 166 (454)
T 1jl5_A 100 CNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLE-KLPE--LQNSSFLKIIDVDNNSLK-- 166 (454)
T ss_dssp SSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCS-SCCC--CTTCTTCCEEECCSSCCS--
T ss_pred CCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCC-CCcc--cCCCCCCCEEECCCCcCc--
Confidence 999995 7764 4889999999999984 4432 279999999999998 4884 558999999999999998
Q ss_pred CCccCcCCCCCCccccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEE
Q 002883 151 IPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLY 230 (871)
Q Consensus 151 ~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~ 230 (871)
.+|..+ .+|++|++++|+++.++ .+..+++|++|++++|++++ +|... .+|++|+
T Consensus 167 ---------~lp~~~---~~L~~L~L~~n~l~~l~--------~~~~l~~L~~L~l~~N~l~~-l~~~~----~~L~~L~ 221 (454)
T 1jl5_A 167 ---------KLPDLP---PSLEFIAAGNNQLEELP--------ELQNLPFLTAIYADNNSLKK-LPDLP----LSLESIV 221 (454)
T ss_dssp ---------CCCCCC---TTCCEEECCSSCCSSCC--------CCTTCTTCCEEECCSSCCSS-CCCCC----TTCCEEE
T ss_pred ---------ccCCCc---ccccEEECcCCcCCcCc--------cccCCCCCCEEECCCCcCCc-CCCCc----CcccEEE
Confidence 334332 48999999999998743 47889999999999999985 45432 4799999
Q ss_pred ccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccc
Q 002883 231 MSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRG 310 (871)
Q Consensus 231 L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 310 (871)
+++|+++ .+| .++.+++|+.|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|++|++++|++++
T Consensus 222 l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 222 AGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE
T ss_pred CcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc
Confidence 9999999 566 49999999999999999995 4543 4799999999999995 5543 3789999999999985
Q ss_pred cCcccccCCCCCCEEecCCCcCCCCCcccccCC-CCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchh
Q 002883 311 SIPSALGNCLQLQKLDLSDNNLSGTIPREVIGL-SSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLA 389 (871)
Q Consensus 311 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 389 (871)
. |.. .++|+.|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++|+.|++++|+++ .+|.
T Consensus 292 l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~--- 354 (454)
T 1jl5_A 292 L-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE--- 354 (454)
T ss_dssp E-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---
T ss_pred c-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---
Confidence 3 321 2689999999999984 22 33 589999999999995 5543 589999999999999 5666
Q ss_pred cccCCceeeecCCcccc--cCccccCCC-------------CCCCEEeCCCCcCCC--CCcccccccccccEEecCCCcC
Q 002883 390 SCVGLEYLNFSDNSFQG--PIHSGFSSL-------------KGLQDLDLSRNNFSG--KIPMFLNTFRFLQKLNLSFNNL 452 (871)
Q Consensus 390 ~l~~L~~L~L~~N~l~~--~~~~~~~~l-------------~~L~~L~l~~N~l~~--~~~~~~~~~~~L~~L~l~~N~l 452 (871)
.+++|++|++++|++++ ..|..+..+ ++|+.|++++|++++ .+|. +++.|.+.+|.+
T Consensus 355 ~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~ 428 (454)
T 1jl5_A 355 LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERV 428 (454)
T ss_dssp CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------------------------------
T ss_pred hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchh------hHhheeCcCccc
Confidence 47899999999999998 677778777 889999999999996 4553 467788999998
Q ss_pred cccCCC
Q 002883 453 EGEVPS 458 (871)
Q Consensus 453 ~~~~~~ 458 (871)
.+..+.
T Consensus 429 ~~~~~~ 434 (454)
T 1jl5_A 429 VDPYEF 434 (454)
T ss_dssp ------
T ss_pred CCcccc
Confidence 876553
No 72
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.2e-41 Score=365.67 Aligned_cols=265 Identities=20% Similarity=0.359 Sum_probs=200.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|++++++++||||+++++++.... ..+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence 468999999999999999999999899999999996543 223457889999999999999999999986652 2234
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 159 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG-------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMD 159 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECC
T ss_pred ccEEEEecCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEee
Confidence 5699999999999999997643 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||.+.................||+.|+|||++.+..++.++|||||||++|+|++|+.||..................+.
T Consensus 160 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (311)
T 3ork_A 160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 239 (311)
T ss_dssp CSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCH
T ss_pred ccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCc
Confidence 99998765543333333445789999999999989999999999999999999999999976433322111111111110
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHH-HHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDA-IMELQEA 862 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~ev-l~~L~~i 862 (871)
. .....+..++.+++.+||+.||++||++.++ .+.+..+
T Consensus 240 ~-----------------------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 240 S-----------------------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp H-----------------------------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred c-----------------------------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0 0011234567799999999999999975554 4555444
No 73
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.4e-41 Score=353.39 Aligned_cols=258 Identities=26% Similarity=0.439 Sum_probs=209.2
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||+||+|++. +++.||+|++..... ..+.+.+|++++++++||||+++++++.+. ...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ-----APIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----SSEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CceE
Confidence 467999999999999999999997 577899999975443 346789999999999999999999998765 5689
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL 717 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 717 (871)
+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 82 lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 152 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQRG------LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGM 152 (269)
T ss_dssp EEEECCTTCBHHHHHHTTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTG
T ss_pred EEEEeCCCCcHHHHHHhcCc------ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccc
Confidence 99999999999999976432 589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883 718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQV 796 (871)
Q Consensus 718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 796 (871)
+....... ........+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||........ ............
T Consensus 153 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~--~~~~~~~~~~~~ 228 (269)
T 4hcu_A 153 TRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--VEDISTGFRLYK 228 (269)
T ss_dssp GGGBCCHH--HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHHHTTCCCCC
T ss_pred cccccccc--cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH--HHHHhcCccCCC
Confidence 98654321 112223456788999999988899999999999999999999 9999975432211 111111110000
Q ss_pred hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
.. .....+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 229 ~~------------------------------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 229 PR------------------------------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CT------------------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CC------------------------------cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 00 1123567899999999999999999999999998763
No 74
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3e-41 Score=370.77 Aligned_cols=281 Identities=21% Similarity=0.333 Sum_probs=219.6
Q ss_pred cccCHHHHHHhhcCCCCCceeeccccceEEEEE-----ECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCccc
Q 002883 547 LKISYAELLKATEGFSSANLIGIGGYGYVYKGI-----LGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSI-RHRNLV 619 (871)
Q Consensus 547 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv 619 (871)
..+....+....++|++.+.||+|+||.||+|+ ...+++.||||+++... ....+.+.+|+++++++ +||||+
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence 345556666778899999999999999999999 45567899999996543 23346789999999999 799999
Q ss_pred eeeeeecccCcCCCceeeEEEeccCCCCHHHHhhccccccc---------------------------------------
Q 002883 620 KIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQN--------------------------------------- 660 (871)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------------------------------------- 660 (871)
++++++.+. +...++||||+++|+|.+++........
T Consensus 90 ~~~~~~~~~----~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
T 3vhe_A 90 NLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASS 165 (359)
T ss_dssp CEEEEECST----TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------
T ss_pred eeeeeeecC----CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccc
Confidence 999998654 2447999999999999999987542100
Q ss_pred --------------------ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883 661 --------------------QRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL 720 (871)
Q Consensus 661 --------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 720 (871)
....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 242 (359)
T 3vhe_A 166 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARD 242 (359)
T ss_dssp ------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred ccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceee
Confidence 011289999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCchhhhh
Q 002883 721 LHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQVAEI 799 (871)
Q Consensus 721 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (871)
..... .........||+.|+|||++.+..++.++|||||||++|||+| |+.||............... ........
T Consensus 243 ~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~- 319 (359)
T 3vhe_A 243 IYKDP-DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPD- 319 (359)
T ss_dssp TTSCT-TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH-TCCCCCCT-
T ss_pred ecccc-cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHc-CCCCCCCC-
Confidence 65432 2223344568999999999888999999999999999999998 99999754322211111111 11100000
Q ss_pred cChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 800 IDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
.+..++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 320 -----------------------------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 320 -----------------------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp -----------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 12235678999999999999999999999999987654
No 75
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.1e-41 Score=352.74 Aligned_cols=258 Identities=27% Similarity=0.411 Sum_probs=208.8
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||.||+|++. ++..||+|++..... ..+.+.+|++++++++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKE-----YPIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SSEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccC-----CceE
Confidence 467999999999999999999887 677899999975443 346789999999999999999999998654 5689
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL 717 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 717 (871)
+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 80 lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~ 150 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGK------GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGM 150 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTC
T ss_pred EEEEccCCCcHHHHHHHcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCcc
Confidence 99999999999999977542 489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883 718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQV 796 (871)
Q Consensus 718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 796 (871)
+....... ........+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||........... .... .....
T Consensus 151 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~-~~~~-~~~~~ 226 (268)
T 3sxs_A 151 TRYVLDDQ--YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK-VSQG-HRLYR 226 (268)
T ss_dssp EEECCTTC--EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-HHTT-CCCCC
T ss_pred ceecchhh--hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH-HHcC-CCCCC
Confidence 98765432 122233456778999999988889999999999999999999 9999975433221111 1110 00000
Q ss_pred hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
.. .....+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 227 ~~------------------------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 227 PH------------------------------LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CT------------------------------TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CC------------------------------cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 00 1123567899999999999999999999999987554
No 76
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=362.10 Aligned_cols=280 Identities=24% Similarity=0.322 Sum_probs=209.2
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHHHHcC---CCCccceeeeeeccc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-----RGASKSFIAECEALRSI---RHRNLVKIITSCSSI 628 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~ 628 (871)
..++|++.+.||+|+||+||+|++..+++.||||++.... ......+.+|+++++.+ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3578999999999999999999998899999999986432 12235667788887776 499999999999876
Q ss_pred CcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC
Q 002883 629 DTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM 708 (871)
Q Consensus 629 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 708 (871)
........++||||++ ++|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~ 157 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP-----GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGG 157 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTS
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCC
Confidence 5554557899999996 6999999875432 489999999999999999999999 999999999999999999
Q ss_pred ceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHh
Q 002883 709 VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYA 788 (871)
Q Consensus 709 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~ 788 (871)
.+||+|||.|....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||..............
T Consensus 158 ~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~ 233 (308)
T 3g33_A 158 TVKLADFGLARIYSYQM----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 233 (308)
T ss_dssp CEEECSCSCTTTSTTCC----CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHH
T ss_pred CEEEeeCccccccCCCc----ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99999999998664322 22345789999999999889999999999999999999999999976544332222221
Q ss_pred hhCCCch--hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 789 KMGLPDQ--VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 789 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
....+.. ...... ... ................++..++.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 234 LIGLPPEDDWPRDVS--LPR------GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHCCCCTTTSCSSCS--SCG------GGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCChhhccchhh--ccc------cccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 1111111 000000 000 000000011111222234567889999999999999999999986
No 77
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.4e-41 Score=374.97 Aligned_cols=254 Identities=17% Similarity=0.249 Sum_probs=204.7
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
..++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+. .
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE-----G 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECS-----S
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEEC-----C
Confidence 3467999999999999999999999999999999996543 23346788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC---CCCceE
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD---NEMVAH 711 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~k 711 (871)
..|+||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||+++ .++.+|
T Consensus 84 ~~~lv~E~~~gg~L~~~i~~~~-------~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vk 153 (444)
T 3soa_A 84 HHYLIFDLVTGGELFEDIVARE-------YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVK 153 (444)
T ss_dssp EEEEEECCCBCCBHHHHHHHCS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEE
T ss_pred EEEEEEEeCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEE
Confidence 7899999999999999997653 589999999999999999999999 999999999999998 567899
Q ss_pred EeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
|+|||+|....... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||........ ........
T Consensus 154 L~DFG~a~~~~~~~---~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~-~~~i~~~~ 229 (444)
T 3soa_A 154 LADFGLAIEVEGEQ---QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL-YQQIKAGA 229 (444)
T ss_dssp ECCCSSCBCCCTTC---CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHTC
T ss_pred EccCceeEEecCCC---ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHhCC
Confidence 99999998765432 222345799999999999988999999999999999999999999975432211 11111111
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.... . +.+..+..++.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~-----~-----------------------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 230 YDFP-----S-----------------------PEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CCCC-----T-----------------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCC-----c-----------------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1000 0 001122345779999999999999999999986
No 78
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=371.73 Aligned_cols=268 Identities=22% Similarity=0.363 Sum_probs=210.6
Q ss_pred hcCCCCCceeeccccceEEEEEE-----CCCCcEEEEEEeecc-ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGIL-----GTEETNVAVKVLDLQ-QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 631 (871)
.++|++.+.||+|+||+||+|++ ..+++.||||+++.. .......+.+|+.++++++||||+++++++...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--- 146 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--- 146 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 45789999999999999999995 346778999999643 233446788999999999999999999998765
Q ss_pred CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC---
Q 002883 632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM--- 708 (871)
Q Consensus 632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~--- 708 (871)
...++||||+++|+|.+++............+++.+++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 147 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 221 (367)
T 3l9p_A 147 --LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 221 (367)
T ss_dssp --SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred --CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCc
Confidence 557999999999999999987654433344699999999999999999999999 999999999999999555
Q ss_pred ceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHH
Q 002883 709 VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKY 787 (871)
Q Consensus 709 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~ 787 (871)
.+||+|||+|+...... .........||+.|+|||++.+..++.++|||||||++|||++ |..||........ ...
T Consensus 222 ~~kL~DFG~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~--~~~ 298 (367)
T 3l9p_A 222 VAKIGDFGMARDIYRAG-YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--LEF 298 (367)
T ss_dssp CEEECCCHHHHHHHHHS-SCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--HHH
T ss_pred eEEECCCcccccccccc-ccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH
Confidence 59999999998653321 1122233467899999999988999999999999999999998 9999975432211 111
Q ss_pred hhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 788 AKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
.......... ..++..+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 299 i~~~~~~~~~------------------------------~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 299 VTSGGRMDPP------------------------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HHTTCCCCCC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHcCCCCCCC------------------------------ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 1111000000 012345778999999999999999999999999886643
No 79
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=367.27 Aligned_cols=251 Identities=22% Similarity=0.281 Sum_probs=200.1
Q ss_pred HhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcC
Q 002883 556 KATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 556 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 631 (871)
...++|++.+.||+|+||+||+|++..+++.||||+++.. .......+.+|.++++.+ +||||+++++++.+.
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~--- 96 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP--- 96 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS---
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC---
Confidence 3457899999999999999999999999999999999643 233456778899999988 799999999998765
Q ss_pred CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 002883 632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711 (871)
Q Consensus 632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 711 (871)
...|+||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 97 --~~~~lv~E~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ik 164 (353)
T 3txo_A 97 --DRLFFVMEFVNGGDLMFHIQKSR-------RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCK 164 (353)
T ss_dssp --SEEEEEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred --CEEEEEEeCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEE
Confidence 67899999999999999997754 599999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
|+|||+|+..... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||........ ........
T Consensus 165 L~DFG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-~~~i~~~~ 240 (353)
T 3txo_A 165 LADFGMCKEGICN---GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL-FEAILNDE 240 (353)
T ss_dssp ECCCTTCBCSCC------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCC
T ss_pred EccccceeecccC---CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH-HHHHHcCC
Confidence 9999999854322 2223446799999999999888899999999999999999999999975433221 11111111
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCH------HHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKI------QDAIM 857 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta------~evl~ 857 (871)
.. ... .....+.+++.+||+.||++||++ +|+++
T Consensus 241 ~~--~p~------------------------------~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 241 VV--YPT------------------------------WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CC--CCT------------------------------TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CC--CCC------------------------------CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 00 000 122346789999999999999998 67665
No 80
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.1e-41 Score=366.81 Aligned_cols=253 Identities=19% Similarity=0.310 Sum_probs=205.0
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+. ..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-----~~ 102 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-----SF 102 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----SE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----CE
Confidence 467999999999999999999999999999999996543 23346788999999999999999999998765 67
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC---ceEE
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM---VAHV 712 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl 712 (871)
.|+||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||+++.++ .+||
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 172 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIVARE-------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKL 172 (362)
T ss_dssp EEEEECCCCSCBHHHHHTTCS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 899999999999999997643 589999999999999999999999 999999999999997654 5999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
+|||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||........ .........
T Consensus 173 ~DfG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-~~~i~~~~~ 247 (362)
T 2bdw_A 173 ADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL-YAQIKAGAY 247 (362)
T ss_dssp CCCTTCBCCTTCC----SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCC
T ss_pred eecCcceEecCCc----ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCC
Confidence 9999998765332 22335699999999999988999999999999999999999999975432211 111111111
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
... . +.+..+..++.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~-----~-----------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 248 DYP-----S-----------------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CCC-----T-----------------------TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCC-----c-----------------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0 0011233457799999999999999999998864
No 81
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-40 Score=370.04 Aligned_cols=287 Identities=23% Similarity=0.296 Sum_probs=200.8
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHHHHcCC-CCccceeeeeecccCcCCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ--QRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 633 (871)
..++|++.+.||+|+||.||+|.+..+++.||||++... .......+.+|+.+++.+. ||||+++++++...+ .
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~---~ 83 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN---D 83 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT---S
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC---C
Confidence 457899999999999999999999999999999998432 2334567789999999996 999999999986532 2
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...|+||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 151 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRAN--------ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVA 151 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHT--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred CEEEEEecccC-cCHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEec
Confidence 56899999996 6999998753 489999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCC------------------CccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCC
Q 002883 714 DFGLSRLLHDNSP------------------DQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPT 774 (871)
Q Consensus 714 Dfg~a~~~~~~~~------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf 774 (871)
|||+|+....... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||
T Consensus 152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 231 (388)
T 3oz6_A 152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231 (388)
T ss_dssp CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCC
Confidence 9999987643111 1112234579999999998776 67899999999999999999999999
Q ss_pred chhhhhhhhHHHHhhhCCCch-hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHH-------------HHHHHHHhhhcc
Q 002883 775 DDMFEEGLSLHKYAKMGLPDQ-VAEIIDPAILEEALEIQAGIVKELQPNLRAKFH-------------EIQVSILRVGIL 840 (871)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~li~~ 840 (871)
................+.|.. ....+..........................+. .+..++.+++.+
T Consensus 232 ~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ 311 (388)
T 3oz6_A 232 PGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDK 311 (388)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHH
Confidence 865433322222222233322 111111111111111100000000000001111 234578899999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 002883 841 CSEELPRDRMKIQDAIME 858 (871)
Q Consensus 841 cl~~dP~~RPta~evl~~ 858 (871)
||+.||++|||++|+++.
T Consensus 312 ~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 312 LLQFNPNKRISANDALKH 329 (388)
T ss_dssp HCCSSGGGSCCHHHHTTS
T ss_pred hhccCcccCCCHHHHhCC
Confidence 999999999999999864
No 82
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1e-40 Score=367.08 Aligned_cols=254 Identities=18% Similarity=0.281 Sum_probs=207.3
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++..........+.+|+++++.++||||+++++++.+. ...+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-----~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK-----YEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS-----SEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC-----CEEE
Confidence 46799999999999999999999999999999999766555566889999999999999999999998765 6789
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC--CCCceEEeec
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD--NEMVAHVGDF 715 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~--~~~~~kl~Df 715 (871)
+||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++ .++.+||+||
T Consensus 125 lv~E~~~gg~L~~~l~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DF 195 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAEDY------KMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDF 195 (387)
T ss_dssp EEEECCCCCBHHHHTTCTTC------CBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCC
T ss_pred EEEEcCCCCcHHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEec
Confidence 99999999999999976432 489999999999999999999999 999999999999997 4578999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
|+|....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||....... .............
T Consensus 196 G~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-~~~~i~~~~~~~~ 270 (387)
T 1kob_A 196 GLATKLNPDE----IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-TLQNVKRCDWEFD 270 (387)
T ss_dssp TTCEECCTTS----CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHCCCCCC
T ss_pred ccceecCCCc----ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCC
Confidence 9998765432 2233469999999999999999999999999999999999999997543221 1111111110000
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
+ ..+..+..++.+++.+||+.||++|||+.|+++.
T Consensus 271 -------------------------~---~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 271 -------------------------E---DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -------------------------S---STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -------------------------c---cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0 0001233467799999999999999999999873
No 83
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.4e-40 Score=352.35 Aligned_cols=285 Identities=32% Similarity=0.474 Sum_probs=221.2
Q ss_pred cccccCHHHHHHhhcCCCCC------ceeeccccceEEEEEECCCCcEEEEEEeecc----ccchHHHHHHHHHHHHcCC
Q 002883 545 KYLKISYAELLKATEGFSSA------NLIGIGGYGYVYKGILGTEETNVAVKVLDLQ----QRGASKSFIAECEALRSIR 614 (871)
Q Consensus 545 ~~~~~~~~~~~~~~~~y~~~------~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~ 614 (871)
....+++.++...+++|... +.||+|+||.||+|.+ +++.||||++... .....+.+.+|++++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 34567889999988887766 9999999999999997 5789999998542 2334578899999999999
Q ss_pred CCccceeeeeecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 002883 615 HRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVH 694 (871)
Q Consensus 615 h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 694 (871)
||||+++++++.+. ...++||||+++++|.+++..... ...+++..++.++.|++.||.|||+. +|+|
T Consensus 89 h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H 156 (307)
T 2nru_A 89 HENLVELLGFSSDG-----DDLCLVYVYMPNGSLLDRLSCLDG----TPPLSWHMRCKIAQGAANGINFLHEN---HHIH 156 (307)
T ss_dssp CTTBCCEEEEECSS-----SSCEEEEECCTTCBHHHHHHTGGG----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred CCCeEEEEEEEecC-----CceEEEEEecCCCcHHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHhcC---Ceec
Confidence 99999999998765 568999999999999999975432 23589999999999999999999999 9999
Q ss_pred cCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCC
Q 002883 695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPT 774 (871)
Q Consensus 695 ~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf 774 (871)
|||||+||+++.++.+||+|||.+........ ........||+.|+|||.+.+ .++.++||||||+++|+|++|+.||
T Consensus 157 ~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~ 234 (307)
T 2nru_A 157 RDIKSANILLDEAFTAKISDFGLARASEKFAQ-TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAV 234 (307)
T ss_dssp SCCCGGGEEECTTCCEEECCCTTCEECCSCSS-CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSB
T ss_pred CCCCHHHEEEcCCCcEEEeecccccccccccc-cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCc
Confidence 99999999999999999999999987654321 222334568999999998654 5899999999999999999999999
Q ss_pred chhhhhhhhHHHH-hhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHH
Q 002883 775 DDMFEEGLSLHKY-AKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQ 853 (871)
Q Consensus 775 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~ 853 (871)
............. ........+.+++++.. ..........+.+++.+||+.||++|||+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 295 (307)
T 2nru_A 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-------------------NDADSTSVEAMYSVASQCLHEKKNKRPDIK 295 (307)
T ss_dssp CTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC-------------------SCCCHHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred ccCcchHHHHHHHHHhhhhhhhhhhhccccc-------------------cccchHHHHHHHHHHHHHcCCCcccCcCHH
Confidence 8643221111000 00011111112222111 111224556788999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002883 854 DAIMELQEAQK 864 (871)
Q Consensus 854 evl~~L~~i~~ 864 (871)
|+++.|+++.+
T Consensus 296 ~l~~~L~~l~~ 306 (307)
T 2nru_A 296 KVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhc
Confidence 99999998854
No 84
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=355.57 Aligned_cols=246 Identities=23% Similarity=0.295 Sum_probs=203.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+. .
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~-----~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA-----Q 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS-----S
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC-----C
Confidence 467999999999999999999999999999999996432 23456788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+++|+|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~D 149 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKSQ-------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITD 149 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHTS-------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECC
T ss_pred EEEEEEeCCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEee
Confidence 7899999999999999997643 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...........
T Consensus 150 fg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~- 221 (318)
T 1fot_A 150 FGFAKYVPDV------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-TYEKILNAELR- 221 (318)
T ss_dssp CSSCEECSSC------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHCCCC-
T ss_pred cCcceecCCc------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCC-
Confidence 9999875432 223569999999999999999999999999999999999999997532221 11111111000
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-----CHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-----KIQDAIM 857 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----ta~evl~ 857 (871)
.++ ....++.+++.+|++.||++|| +++|+++
T Consensus 222 ------------------------~p~-------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 222 ------------------------FPP-------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ------------------------CCT-------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ------------------------CCC-------CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 000 1223567899999999999999 8888875
No 85
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.7e-41 Score=363.43 Aligned_cols=248 Identities=25% Similarity=0.346 Sum_probs=201.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP-----T 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----C
Confidence 468999999999999999999999899999999996432 22346788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..++||||+ +|+|.+++.... .+++.+++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~D 151 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEKK-------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIAD 151 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECC
T ss_pred EEEEEEECC-CCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEE
Confidence 689999999 789999987644 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
||++....... ......||+.|+|||++.+..+ ++++||||+||++|+|++|+.||......... . ...
T Consensus 152 FG~s~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~--~----~i~ 221 (336)
T 3h4j_B 152 FGLSNIMTDGN----FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF--K----KVN 221 (336)
T ss_dssp SSCTBTTTTSB----TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB--C----CCC
T ss_pred eccceeccCCc----ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH--H----HHH
Confidence 99998765332 2233569999999999887776 78999999999999999999999753221100 0 000
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
..... .+ ......+.+++.+||+.||++|||++|+++.
T Consensus 222 ~~~~~--~p-------------------------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 222 SCVYV--MP-------------------------DFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp SSCCC--CC-------------------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cCCCC--Cc-------------------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00000 00 0122356789999999999999999999763
No 86
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.6e-40 Score=356.32 Aligned_cols=275 Identities=24% Similarity=0.312 Sum_probs=203.8
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||+||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++.+. ..
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE-----RC 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS-----SC
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC-----CE
Confidence 468999999999999999999996 68999999986432 23346788999999999999999999998765 66
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.++||||++ ++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 94 ~~lv~e~~~-~~l~~~~~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 163 (311)
T 3niz_A 94 LTLVFEFME-KDLKKVLDENKT------GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADF 163 (311)
T ss_dssp EEEEEECCS-EEHHHHHHTCTT------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEcCCC-CCHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccC
Confidence 899999997 588888876432 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC--
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL-- 792 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~-- 792 (871)
|.+....... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..................
T Consensus 164 g~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~ 240 (311)
T 3niz_A 164 GLARAFGIPV---RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN 240 (311)
T ss_dssp TTCEETTSCC---C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCC
T ss_pred cCceecCCCc---ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCC
Confidence 9998765322 22233468999999998765 56899999999999999999999999865443322222221111
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcC-chhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQ-PNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
+.......+.... ......... .........+..++.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 241 PREWPQVQELPLW------KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TTTSGGGTTSHHH------HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hHHhhhhhccchh------hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111111110000 000000000 0111111233456789999999999999999999986
No 87
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=362.58 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=202.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+. .
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-----~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE-----E 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----C
Confidence 467999999999999999999999999999999996432 33456788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+.+|+|.+++.... .+++..++.++.||+.||.|||+. ||+||||||+||+++.++.+||+|
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~D 158 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQNV-------HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITD 158 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred EEEEEEecCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEec
Confidence 7899999999999999998643 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhh-hHHHHhhh
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA---LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGL-SLHKYAKM 790 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~-~~~~~~~~ 790 (871)
||+|...... .......||+.|+|||++. +..++.++||||+||++|||++|+.||........ ........
T Consensus 159 FG~a~~~~~~----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~ 234 (384)
T 4fr4_A 159 FNIAAMLPRE----TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET 234 (384)
T ss_dssp CTTCEECCTT----CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH
T ss_pred cceeeeccCC----CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh
Confidence 9999876533 2233457999999999876 34689999999999999999999999974322111 11111000
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCC-HHHHHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMK-IQDAIM 857 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-a~evl~ 857 (871)
.... .+ ..+...+.+++.+||+.||++||+ ++++.+
T Consensus 235 ~~~~------------------------~p-------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 235 TVVT------------------------YP-------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCCC------------------------CC-------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred cccC------------------------CC-------CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0000 00 012345779999999999999998 666653
No 88
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=359.85 Aligned_cols=284 Identities=20% Similarity=0.254 Sum_probs=213.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.... ....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCC---CceE
Confidence 367999999999999999999999899999999996433 234567889999999999999999999886542 2467
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee----CCCCceEE
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL----DNEMVAHV 712 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl 712 (871)
++||||+++++|.+++...... ..+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL 157 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSNA----YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKL 157 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGGT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEE
T ss_pred EEEEeCCCCCCHHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEE
Confidence 9999999999999999875421 2389999999999999999999999 99999999999999 78888999
Q ss_pred eecccceecCCCCCCccccccccccccccCccccc--------CCCCCCccchhhHHHHHHHHHhCCCCCchhhhh---h
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA--------LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEE---G 781 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~---~ 781 (871)
+|||.+....... ......||+.|+|||++. +..++.++|||||||++|||++|+.||...... .
T Consensus 158 ~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 233 (319)
T 4euu_A 158 TDFGAARELEDDE----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233 (319)
T ss_dssp CCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH
T ss_pred ccCCCceecCCCC----ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH
Confidence 9999998775432 222356999999999865 578899999999999999999999999743221 1
Q ss_pred hhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHH
Q 002883 782 LSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQE 861 (871)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~ 861 (871)
...........+.....+....... ....... +............+.+++.+||+.||++|||++|+++...+
T Consensus 234 ~~~~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 234 EVMYKIITGKPSGAISGVQKAENGP------IDWSGDM-PVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp HHHHHHHHHCCTTCCEEEECSTTCC------EEEESSC-CTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHhcCCCcccchhhhcccCCc------cccCccC-CcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 1112222211111111000000000 0000000 00011123556678899999999999999999999999876
Q ss_pred H
Q 002883 862 A 862 (871)
Q Consensus 862 i 862 (871)
.
T Consensus 307 ~ 307 (319)
T 4euu_A 307 I 307 (319)
T ss_dssp H
T ss_pred H
Confidence 5
No 89
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-40 Score=360.26 Aligned_cols=280 Identities=22% Similarity=0.271 Sum_probs=215.5
Q ss_pred hcCCCCCceeeccccceEEEEE----ECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGI----LGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
.++|++.+.||+|+||.||+|+ ...+++.||||++........+.+.+|++++++++||||+++++++... +.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP---GR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---SS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC---CC
Confidence 3679999999999999999999 4567899999999776666667899999999999999999999987643 23
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~ 169 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHRA------RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIA 169 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEEC
T ss_pred ceEEEEEeecCCCCHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEc
Confidence 668999999999999999986542 489999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||.+.................+|..|+|||++.+..++.++|||||||++|+|++|+.||.....+......... ..
T Consensus 170 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~--~~ 247 (327)
T 3lxl_A 170 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCER--DV 247 (327)
T ss_dssp CGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC------C
T ss_pred ccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccccc--cc
Confidence 9999998765433223334456888999999988888999999999999999999999999754332111100000 00
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
.... .... .......... ...+...+.+++.+||+.||++|||+.|+++.|+.++...
T Consensus 248 ~~~~---------~~~~---~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 248 PALS---------RLLE---LLEEGQRLPA---PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp CHHH---------HHHH---HHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred ccHH---------HHHH---HhhcccCCCC---CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 0000 0000 0000000000 1133456789999999999999999999999999886544
No 90
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4e-40 Score=371.77 Aligned_cols=280 Identities=20% Similarity=0.201 Sum_probs=205.3
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-CCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT-RGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 634 (871)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+.+.+|+.+++.++||||+++++++..... ....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46899999999999999999999999999999999643 33345678899999999999999999999866532 2346
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+++ ++.+.+.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~D 207 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 207 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred eEEEEEeCCCC-CHHHHHhh---------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEE
Confidence 68999999965 57766643 488999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||+|+..... .......||+.|+|||++.+..|+.++||||+||++|||++|+.||.+....+.........+.+.
T Consensus 208 FG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~ 283 (464)
T 3ttj_A 208 FGLARTAGTS----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283 (464)
T ss_dssp CCCC-----C----CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC
T ss_pred EEeeeecCCC----cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 9999876532 123345799999999999999999999999999999999999999986443322221111222221
Q ss_pred -hhhhhcChhHHHHHHHHHhhh------------hhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 795 -QVAEIIDPAILEEALEIQAGI------------VKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 795 -~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
.....+.+... ...... .....+...........++.+++.+||+.||++|||++|+++.
T Consensus 284 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 284 PEFMKKLQPTVR----NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCHHHH----HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcchhhh----hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11111111111 000000 0000111111222346678999999999999999999999863
No 91
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=6.9e-41 Score=362.69 Aligned_cols=251 Identities=24% Similarity=0.320 Sum_probs=203.0
Q ss_pred HHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcC-CCCccceeeeeecccCc
Q 002883 555 LKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSI-RHRNLVKIITSCSSIDT 630 (871)
Q Consensus 555 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 630 (871)
....++|++.+.||+|+||.||+|++..+++.||||+++... ......+..|.++++.+ +||||+++++++.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~-- 90 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK-- 90 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS--
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeC--
Confidence 345678999999999999999999999999999999996532 23456678899999876 999999999998765
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCce
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA 710 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 710 (871)
...|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 91 ---~~~~lv~E~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~v 157 (345)
T 1xjd_A 91 ---ENLFFVMEYLNGGDLMYHIQSCH-------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHI 157 (345)
T ss_dssp ---SEEEEEEECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred ---CEEEEEEeCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCE
Confidence 67899999999999999997643 589999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh
Q 002883 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790 (871)
Q Consensus 711 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~ 790 (871)
||+|||+|+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .......
T Consensus 158 kL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~ 233 (345)
T 1xjd_A 158 KIADFGMCKENMLGD---AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL-FHSIRMD 233 (345)
T ss_dssp EECCCTTCBCCCCTT---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHC
T ss_pred EEeEChhhhhcccCC---CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH-HHHHHhC
Confidence 999999998643221 223446799999999999999999999999999999999999999975432211 1111111
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHH-HHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQ-DAI 856 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~-evl 856 (871)
. + .... ....++.+++.+||+.||++||++. |++
T Consensus 234 ~-~-~~p~------------------------------~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 234 N-P-FYPR------------------------------WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp C-C-CCCT------------------------------TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred C-C-CCCc------------------------------ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 0 0 0000 1224567899999999999999997 654
No 92
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-40 Score=377.26 Aligned_cols=286 Identities=20% Similarity=0.232 Sum_probs=197.7
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
++|++.+.||+|+||+||+|++..+++.||||++... .....+.+.+|+++++.++||||+++++++...........
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 6899999999999999999999999999999998543 23345678899999999999999999999876654555778
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
|+||||+ +++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPV-------YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEecc-ccchhhhcccCC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccc
Confidence 9999998 679999997643 599999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCc------------------------cccccccccccccCcccc-cCCCCCCccchhhHHHHHHHHHh--
Q 002883 717 LSRLLHDNSPDQ------------------------TSTSRVKGSIGYVAPEYG-ALGEVSTHGDEYSFGILMLEMFT-- 769 (871)
Q Consensus 717 ~a~~~~~~~~~~------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~ellt-- 769 (871)
+|+......... ......+||+.|+|||++ ....++.++||||+||++|||++
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~ 281 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence 998765322110 123345789999999975 56679999999999999999999
Q ss_pred ---------CCCCCchhhhh-------------------hhhHHHHh-hhCCCc-hhhhhcChhHHHHHHHHHhhhhhhc
Q 002883 770 ---------GKRPTDDMFEE-------------------GLSLHKYA-KMGLPD-QVAEIIDPAILEEALEIQAGIVKEL 819 (871)
Q Consensus 770 ---------G~~pf~~~~~~-------------------~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (871)
|+++|.+.... ...+..+. ..+.+. .....+.... .........+..
T Consensus 282 ~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~---~~~~~~~~~~~~ 358 (458)
T 3rp9_A 282 KENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKED---AKRYIRIFPKRE 358 (458)
T ss_dssp TTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHH---HHHHHTTSCCCC
T ss_pred cccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHH---HHHHHHhcCCCC
Confidence 56666432210 00000000 011111 1111111110 111111111111
Q ss_pred CchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 820 QPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 820 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
.......+.....++.+|+.+||..||++|||++|+++.
T Consensus 359 ~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 359 GTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp CCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 222333344456778899999999999999999999873
No 93
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.9e-41 Score=356.88 Aligned_cols=277 Identities=21% Similarity=0.267 Sum_probs=202.5
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-----KKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC-----CEE
Confidence 57999999999999999999999999999999996443 23346788999999999999999999998765 678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
++||||+++ ++.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg 146 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCNG------DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFG 146 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEecCCC-CHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 999999965 66666654322 599999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhh-hCCCc
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE-VSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAK-MGLPD 794 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~-~~~~~ 794 (871)
.+....... .......||+.|+|||++.+.. ++.++||||+||++|+|++|..||............... ...+.
T Consensus 147 ~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~ 223 (292)
T 3o0g_A 147 LARAFGIPV---RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223 (292)
T ss_dssp TCEECCSCC---SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cceecCCcc---ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 998765322 2223356899999999887665 799999999999999999988886433222222222221 11111
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
. ..+........... ....................+.+++.+||+.||++|||++|+++
T Consensus 224 ~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 224 E-EQWPSMTKLPDYKP---YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp T-TTCTTGGGSTTCCC---CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred h-hhhhhhcccccccc---cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00000000000000 00000000001111233456789999999999999999999986
No 94
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.6e-40 Score=348.08 Aligned_cols=251 Identities=20% Similarity=0.260 Sum_probs=206.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||+||+|++..++..||+|++........+.+.+|++++++++||||+++++++.+. ...+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 82 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN-----TDIY 82 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----SEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CeEE
Confidence 45799999999999999999999999999999999766666678899999999999999999999998765 6689
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee---CCCCceEEee
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGD 714 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~D 714 (871)
+||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 83 lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~D 152 (277)
T 3f3z_A 83 LVMELCTGGELFERVVHKR-------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLID 152 (277)
T ss_dssp EEEECCCSCBHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEeccCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEe
Confidence 9999999999999987644 589999999999999999999999 99999999999999 7889999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||.+....... ......||+.|+|||.+.+ .+++++||||+|+++|+|++|+.||........ ...........
T Consensus 153 fg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~ 226 (277)
T 3f3z_A 153 FGLAARFKPGK----MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-MLKIREGTFTF 226 (277)
T ss_dssp CTTCEECCTTS----CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCC
T ss_pred cccceeccCcc----chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCCCC
Confidence 99998765432 2233468999999998765 499999999999999999999999976433221 11111111100
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
. ......+...+.+++.+|++.||++|||+.|+++
T Consensus 227 ~----------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 227 P----------------------------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp C----------------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred C----------------------------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0111123456789999999999999999999986
No 95
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.3e-40 Score=357.60 Aligned_cols=263 Identities=17% Similarity=0.238 Sum_probs=209.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||+||+|++..+++.||||++..... .+.+.+|+++++.+ +||||+++++++... ...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~-----~~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCG-----KYN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEET-----TEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecC-----Ccc
Confidence 3679999999999999999999988999999999865432 34678999999999 999999999998765 678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc-----eE
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV-----AH 711 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-----~k 711 (871)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +|
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~k 150 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLCDR------TFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIH 150 (330)
T ss_dssp EEEEECC-CCBHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEE
T ss_pred EEEEEeC-CCCHHHHHHHcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEE
Confidence 9999999 9999999986432 599999999999999999999999 9999999999999998887 99
Q ss_pred EeecccceecCCCCCCcc----ccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhh--HH
Q 002883 712 VGDFGLSRLLHDNSPDQT----STSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLS--LH 785 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~--~~ 785 (871)
|+|||+|+.......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....+... ..
T Consensus 151 l~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~ 230 (330)
T 2izr_A 151 IIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQ 230 (330)
T ss_dssp ECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHH
T ss_pred EEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHH
Confidence 999999997654332211 123467999999999999999999999999999999999999999853221110 00
Q ss_pred HHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 786 KYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
...... ...+ ........+ ++.+++..|++.||.+||+++++.+.|+++.+.
T Consensus 231 ~i~~~~-------------------------~~~~--~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 231 KIGDTK-------------------------RATP--IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHHHHH-------------------------HHSC--HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhhh-------------------------ccCC--HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 000000 0000 000001123 788999999999999999999999999987654
No 96
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=353.52 Aligned_cols=252 Identities=23% Similarity=0.310 Sum_probs=196.9
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--------------------------chHHHHHHHHHHHH
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--------------------------GASKSFIAECEALR 611 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 611 (871)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999999998999999999854321 11346889999999
Q ss_pred cCCCCccceeeeeecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 002883 612 SIRHRNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS 691 (871)
Q Consensus 612 ~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 691 (871)
+++||||+++++++.+. .....|+||||+++++|.+++... .+++..++.++.|++.||+|||+. +
T Consensus 92 ~l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~ 157 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDP---NEDHLYMVFELVNQGPVMEVPTLK--------PLSEDQARFYFQDLIKGIEYLHYQ---K 157 (298)
T ss_dssp TCCCTTBCCEEEEEECS---SSSEEEEEEECCTTCBSCCSSCSS--------CCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hCCCCCCCeEEEEEEcC---CCCEEEEEEecCCCCcHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---C
Confidence 99999999999998653 236789999999999998765432 589999999999999999999999 9
Q ss_pred eEecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCC---CCCccchhhHHHHHHHHH
Q 002883 692 IVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE---VSTHGDEYSFGILMLEMF 768 (871)
Q Consensus 692 ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~ell 768 (871)
|+||||||+||+++.++.+||+|||++....... .......||+.|+|||.+.+.. ++.++|||||||++|+|+
T Consensus 158 ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~ 234 (298)
T 2zv2_A 158 IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD---ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV 234 (298)
T ss_dssp EECCCCCGGGEEECTTSCEEECCCTTCEECSSSS---CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHH
T ss_pred eeccCCCHHHEEECCCCCEEEecCCCcccccccc---ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHH
Confidence 9999999999999999999999999998765432 1223456999999999987655 378899999999999999
Q ss_pred hCCCCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCC
Q 002883 769 TGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRD 848 (871)
Q Consensus 769 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 848 (871)
+|+.||........ ............ ....+...+.+++.+||+.||++
T Consensus 235 ~g~~pf~~~~~~~~-~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~dp~~ 283 (298)
T 2zv2_A 235 FGQCPFMDERIMCL-HSKIKSQALEFP------------------------------DQPDIAEDLKDLITRMLDKNPES 283 (298)
T ss_dssp HSSCSSCCSSHHHH-HHHHHHCCCCCC------------------------------SSSCCCHHHHHHHHHHTCSCTTT
T ss_pred HCCCCCCCccHHHH-HHHHhcccCCCC------------------------------CccccCHHHHHHHHHHhhcChhh
Confidence 99999975322111 001111000000 00012345779999999999999
Q ss_pred CCCHHHHHH
Q 002883 849 RMKIQDAIM 857 (871)
Q Consensus 849 RPta~evl~ 857 (871)
|||+.|+++
T Consensus 284 R~s~~e~l~ 292 (298)
T 2zv2_A 284 RIVVPEIKL 292 (298)
T ss_dssp SCCHHHHTT
T ss_pred CCCHHHHhc
Confidence 999999975
No 97
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.2e-40 Score=353.63 Aligned_cols=253 Identities=28% Similarity=0.434 Sum_probs=203.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccch-------HHHHHHHHHHHHcCCCCccceeeeeecccCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGA-------SKSFIAECEALRSIRHRNLVKIITSCSSIDT 630 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 630 (871)
.++|++.+.||+|+||+||+|++..+++.||+|++....... .+.+.+|++++++++||||+++++++.+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 95 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-- 95 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence 468999999999999999999999899999999985433211 16788999999999999999999998654
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCceeeCCCC
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS--IVHCDLKPSNVLLDNEM 708 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~ 708 (871)
.++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. + |+||||||+||+++.++
T Consensus 96 -----~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~ 161 (287)
T 4f0f_A 96 -----PRMVMEFVPCGDLYHRLLDKAH------PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLD 161 (287)
T ss_dssp -----TEEEEECCTTCBHHHHHHCTTS------CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCC
T ss_pred -----CeEEEEecCCCCHHHHHhcccC------CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccC
Confidence 2699999999999998866432 589999999999999999999999 8 99999999999998877
Q ss_pred c-----eEEeecccceecCCCCCCccccccccccccccCcccc--cCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhh
Q 002883 709 V-----AHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYG--ALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG 781 (871)
Q Consensus 709 ~-----~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~ 781 (871)
. +||+|||.+..... ......||+.|+|||++ ....++.++||||+||++|+|++|+.||.......
T Consensus 162 ~~~~~~~kl~Dfg~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 235 (287)
T 4f0f_A 162 ENAPVCAKVADFGLSQQSVH------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235 (287)
T ss_dssp TTCSCCEEECCCTTCBCCSS------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH
T ss_pred CCCceeEEeCCCCccccccc------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH
Confidence 6 99999999975432 23345689999999987 45567899999999999999999999997543322
Q ss_pred hhHHHHh-hhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHH
Q 002883 782 LSLHKYA-KMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQ 860 (871)
Q Consensus 782 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~ 860 (871)
....... ....+..... .++..+.+++.+||+.||++|||++|+++.|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~------------------------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 236 IKFINMIREEGLRPTIPE------------------------------DCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp HHHHHHHHHSCCCCCCCT------------------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCCc------------------------------ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 2111111 1111111100 22345779999999999999999999999998
Q ss_pred HH
Q 002883 861 EA 862 (871)
Q Consensus 861 ~i 862 (871)
++
T Consensus 286 ~l 287 (287)
T 4f0f_A 286 EL 287 (287)
T ss_dssp TC
T ss_pred hC
Confidence 63
No 98
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.3e-40 Score=352.02 Aligned_cols=262 Identities=23% Similarity=0.358 Sum_probs=199.2
Q ss_pred hhcCCCCCceeeccccceEEEEEECCC---CcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTE---ETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
..++|++.+.||+|+||.||+|++..+ +..||+|++.... ....+.+.+|+.++++++||||+++++++.+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----- 87 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----- 87 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-----
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-----
Confidence 356899999999999999999998643 4579999986432 3345678899999999999999999998743
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
...|+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 88 -~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl 157 (281)
T 1mp8_A 88 -NPVWIIMELCTLGELRSFLQVRKY------SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKL 157 (281)
T ss_dssp -SSCEEEEECCTTEEHHHHHHHTTT------TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEE
T ss_pred -CccEEEEecCCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEE
Confidence 347899999999999999976432 489999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~ 791 (871)
+|||++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |..||........ ........
T Consensus 158 ~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~-~~~i~~~~ 234 (281)
T 1mp8_A 158 GDFGLSRYMEDSTY--YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-IGRIENGE 234 (281)
T ss_dssp CC---------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HHHHHTTC
T ss_pred CccccccccCcccc--cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH-HHHHHcCC
Confidence 99999987654321 12223456789999999888899999999999999999997 9999975433221 11111100
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQ 867 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~~ 867 (871)
.... + ..++..+.+++.+||+.||++|||+.|+++.|+++.+..+
T Consensus 235 -~~~~-----------------------~-------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 235 -RLPM-----------------------P-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp -CCCC-----------------------C-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -CCCC-----------------------C-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 0000 0 0223457789999999999999999999999999977654
No 99
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.8e-39 Score=365.51 Aligned_cols=345 Identities=26% Similarity=0.362 Sum_probs=199.0
Q ss_pred CCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccc
Q 002883 13 CSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQ 92 (871)
Q Consensus 13 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 92 (871)
+++|+.|++++|.++ .+|. +..+++|++|+|++|.+++. |. |.++++|++|+|++|+++ .++. ++.+++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIA-DITP-LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccc-cChh-hcCCCCCCEEE
Confidence 456666666666665 3443 56666666666666666633 33 666666666666666666 3333 66666666666
Q ss_pred cccccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCccc
Q 002883 93 VSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLI 172 (871)
Q Consensus 93 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~ 172 (871)
+++|.+++. +. +.++++|++|++++|.+. .++. +..+++|+.|+++ |.+. .++ .+..+++|+
T Consensus 119 L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~-~~~~-----------~~~-~~~~l~~L~ 180 (466)
T 1o6v_A 119 LFNNQITDI-DP-LKNLTNLNRLELSSNTIS-DISA--LSGLTSLQQLSFG-NQVT-----------DLK-PLANLTTLE 180 (466)
T ss_dssp CCSSCCCCC-GG-GTTCTTCSEEEEEEEEEC-CCGG--GTTCTTCSEEEEE-ESCC-----------CCG-GGTTCTTCC
T ss_pred CCCCCCCCC-hH-HcCCCCCCEEECCCCccC-CChh--hccCCcccEeecC-Cccc-----------Cch-hhccCCCCC
Confidence 666666632 22 555556666666555554 2332 2245555555553 2222 111 144444444
Q ss_pred EEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccce
Q 002883 173 RLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLIL 252 (871)
Q Consensus 173 ~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 252 (871)
+|++++|.++.+ ..+..+++ |++|++++|++++..+ ++.+++|+.
T Consensus 181 ~L~l~~n~l~~~--------~~l~~l~~-------------------------L~~L~l~~n~l~~~~~--~~~l~~L~~ 225 (466)
T 1o6v_A 181 RLDISSNKVSDI--------SVLAKLTN-------------------------LESLIATNNQISDITP--LGILTNLDE 225 (466)
T ss_dssp EEECCSSCCCCC--------GGGGGCTT-------------------------CSEEECCSSCCCCCGG--GGGCTTCCE
T ss_pred EEECcCCcCCCC--------hhhccCCC-------------------------CCEEEecCCccccccc--ccccCCCCE
Confidence 444444444331 12333444 5555555555553333 445555555
Q ss_pred eecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcC
Q 002883 253 IAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNL 332 (871)
Q Consensus 253 L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 332 (871)
|++++|.+++. ..+..+++|+.|++++|++++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++
T Consensus 226 L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l 299 (466)
T 1o6v_A 226 LSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL 299 (466)
T ss_dssp EECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCC
T ss_pred EECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcc
Confidence 55555555532 345566666666666666664333 6666666666666666664333 66666677777777766
Q ss_pred CCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCcccc
Q 002883 333 SGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGF 412 (871)
Q Consensus 333 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 412 (871)
++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +
T Consensus 300 ~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 371 (466)
T 1o6v_A 300 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--L 371 (466)
T ss_dssp SCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--G
T ss_pred cCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--h
Confidence 64332 5666677777777777665444 56667777777777777643 356667777777777777766555 6
Q ss_pred CCCCCCCEEeCCCCcCCC
Q 002883 413 SSLKGLQDLDLSRNNFSG 430 (871)
Q Consensus 413 ~~l~~L~~L~l~~N~l~~ 430 (871)
..+++|+.|++++|++++
T Consensus 372 ~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 372 ANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp TTCTTCCEEECCCEEEEC
T ss_pred hcCCCCCEEeccCCcccC
Confidence 667777777777777764
No 100
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.3e-40 Score=357.40 Aligned_cols=259 Identities=22% Similarity=0.360 Sum_probs=203.0
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCc------
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDT------ 630 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 630 (871)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457999999999999999999999899999999996443 3345788999999999999999999999865422
Q ss_pred ----------------------------------------------CCCceeeEEEeccCCCCHHHHhhcccccccccCC
Q 002883 631 ----------------------------------------------RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPK 664 (871)
Q Consensus 631 ----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~ 664 (871)
....+.++||||+++++|.+++...... ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~----~~ 160 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL----ED 160 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG----GG
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc----cc
Confidence 1123589999999999999999875432 24
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccceecCCCCCCc---------ccccccc
Q 002883 665 LNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQ---------TSTSRVK 735 (871)
Q Consensus 665 l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---------~~~~~~~ 735 (871)
.++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......... .......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 57778999999999999999999 99999999999999999999999999999876542111 1223356
Q ss_pred ccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhh
Q 002883 736 GSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGI 815 (871)
Q Consensus 736 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (871)
||+.|+|||++.+..++.++||||+||++|||++|..|+...... .........+
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~---~~~~~~~~~~---------------------- 292 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI---ITDVRNLKFP---------------------- 292 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH---HHHHHTTCCC----------------------
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHH---HHHhhccCCC----------------------
Confidence 999999999999899999999999999999999998876432111 1111111111
Q ss_pred hhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 816 VKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.........+.+++.+||+.||++|||+.|+++
T Consensus 293 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 293 ---------LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp ---------HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred ---------cccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 111233445678999999999999999999986
No 101
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=361.07 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=190.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|++++++++||||+++++++... ...+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 124 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETP-----TEIS 124 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECS-----SEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecC-----CeEE
Confidence 467999999999999999999999899999999997543 346688999999999999999999998765 6689
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC---CCceEEee
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EMVAHVGD 714 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~D 714 (871)
+||||+++|+|.+++.... .+++.+++.++.|++.||.|||+. +|+||||||+||+++. ++.+||+|
T Consensus 125 lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~D 194 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEKG-------YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIAD 194 (349)
T ss_dssp EEECCCCSCBHHHHHTTCS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEcc
Confidence 9999999999999997643 589999999999999999999999 9999999999999975 88999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....................
T Consensus 195 fg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~ 270 (349)
T 2w4o_A 195 FGLSKIVEHQV----LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYF 270 (349)
T ss_dssp CC--------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCC
T ss_pred CccccccCccc----ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCcc
Confidence 99998764321 22335689999999999988999999999999999999999999975433322222222111100
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
. . +....+..++.+++.+||+.||++|||+.|+++
T Consensus 271 ~-----~-----------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 271 I-----S-----------------------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp C-----T-----------------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C-----C-----------------------chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0 001123346779999999999999999999986
No 102
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.2e-40 Score=352.55 Aligned_cols=264 Identities=16% Similarity=0.184 Sum_probs=211.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++.+ +|++++++++++... ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-----~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEG-----LHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEET-----TEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCC-----cee
Confidence 467999999999999999999998899999999986433 234678899999999 899999999987654 678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc-----eE
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV-----AH 711 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-----~k 711 (871)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +|
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~k 151 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCGR------KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIY 151 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEE
T ss_pred EEEEEec-CCCHHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEE
Confidence 9999999 9999999986532 489999999999999999999999 9999999999999987776 99
Q ss_pred EeecccceecCCCCCCc----cccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhh--hHH
Q 002883 712 VGDFGLSRLLHDNSPDQ----TSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGL--SLH 785 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~--~~~ 785 (871)
|+|||.+.......... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ...
T Consensus 152 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 231 (298)
T 1csn_A 152 VVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYE 231 (298)
T ss_dssp ECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHH
T ss_pred EEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHH
Confidence 99999999876543221 123345699999999999999999999999999999999999999975321110 000
Q ss_pred HHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 786 KYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
...... ..+........++..+.+++.+||+.||++|||++++++.|+++.+.
T Consensus 232 ~~~~~~---------------------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 232 RIGEKK---------------------------QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHHHHH---------------------------HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhhc---------------------------cCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 000000 00000011113456788999999999999999999999999998764
No 103
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.9e-40 Score=357.24 Aligned_cols=269 Identities=24% Similarity=0.359 Sum_probs=212.2
Q ss_pred hhcCCCCCceeeccccceEEEEEE-----CCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGIL-----GTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDT 630 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 630 (871)
..++|++.+.||+|+||.||+|++ ..+++.||+|+++... ....+.+.+|+++++.++||||+++++++.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 98 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD-- 98 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC--
Confidence 356799999999999999999998 3455889999996543 33456788999999999999999999998665
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccc-----------------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQ-----------------NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIV 693 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 693 (871)
...++||||+++++|.+++....... .....+++.+++.++.|++.||+|||+. +|+
T Consensus 99 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iv 172 (314)
T 2ivs_A 99 ---GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLV 172 (314)
T ss_dssp ---SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ---CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCc
Confidence 56899999999999999998754210 0112489999999999999999999999 999
Q ss_pred ecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCC
Q 002883 694 HCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKR 772 (871)
Q Consensus 694 H~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~ 772 (871)
||||||+||+++.++.+||+|||.+........ ........+++.|+|||.+.+..++.++||||+||++|+|++ |+.
T Consensus 173 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 251 (314)
T 2ivs_A 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDS-YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251 (314)
T ss_dssp CCCCSGGGEEEETTTEEEECCCTTCEECTTTSC-EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccccchheEEEcCCCCEEEcccccccccccccc-ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999987654321 122233457889999999888889999999999999999999 999
Q ss_pred CCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCH
Q 002883 773 PTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKI 852 (871)
Q Consensus 773 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta 852 (871)
||........ ............. ..+...+.+++.+||+.||++|||+
T Consensus 252 p~~~~~~~~~--~~~~~~~~~~~~~------------------------------~~~~~~~~~li~~~l~~dp~~Rps~ 299 (314)
T 2ivs_A 252 PYPGIPPERL--FNLLKTGHRMERP------------------------------DNCSEEMYRLMLQCWKQEPDKRPVF 299 (314)
T ss_dssp SSTTCCGGGH--HHHHHTTCCCCCC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCCCHHHH--HHHhhcCCcCCCC------------------------------ccCCHHHHHHHHHHccCChhhCcCH
Confidence 9975432211 1111111000000 0223457799999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 002883 853 QDAIMELQEAQKMR 866 (871)
Q Consensus 853 ~evl~~L~~i~~~~ 866 (871)
.|+++.|+++.+.+
T Consensus 300 ~~l~~~l~~~~~~~ 313 (314)
T 2ivs_A 300 ADISKDLEKMMVKR 313 (314)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999987643
No 104
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.5e-40 Score=358.49 Aligned_cols=246 Identities=21% Similarity=0.236 Sum_probs=203.9
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+++++.++||||+++++++.+. .
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~ 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN-----S 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC-----C
Confidence 467999999999999999999999999999999996432 23456788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+++|+|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~D 184 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRIG-------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTD 184 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred EEEEEEcCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcc
Confidence 7899999999999999998654 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...........
T Consensus 185 Fg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~- 256 (350)
T 1rdq_E 185 FGFAKRVKGR------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-IYEKIVSGKVR- 256 (350)
T ss_dssp CTTCEECSSC------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCC-
T ss_pred cccceeccCC------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH-HHHHHHcCCCC-
Confidence 9999876432 223569999999999999999999999999999999999999997532221 11111111000
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCC-----HHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMK-----IQDAIM 857 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----a~evl~ 857 (871)
. + ..+...+.+++.+||+.||++||+ ++|+++
T Consensus 257 -~-----------------------p-------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 257 -F-----------------------P-------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -C-----------------------C-------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -C-----------------------C-------CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 0 0 012345679999999999999998 788765
No 105
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.7e-40 Score=362.35 Aligned_cols=202 Identities=25% Similarity=0.332 Sum_probs=176.8
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 632 (871)
..++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+.
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~---- 125 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE---- 125 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS----
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC----
Confidence 3468999999999999999999999999999999996542 22234578899999887 899999999998765
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
...|+||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 126 -~~~~lV~E~~~gg~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL 194 (396)
T 4dc2_A 126 -SRLFFVIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKL 194 (396)
T ss_dssp -SEEEEEEECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred -CEEEEEEEcCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEE
Confidence 67899999999999999998654 599999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCch
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDD 776 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 776 (871)
+|||+|+..... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 195 ~DFGla~~~~~~---~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 195 TDYGMCKEGLRP---GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp CCCTTCBCCCCT---TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred eecceeeecccC---CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 999999853322 1223446799999999999999999999999999999999999999964
No 106
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.7e-40 Score=371.07 Aligned_cols=285 Identities=21% Similarity=0.267 Sum_probs=208.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+++++.++||||+++++++..........
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46899999999999999999999999999999999643 2334568899999999999999999999987664444467
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.|+||||++ ++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-------~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DF 173 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-------FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDF 173 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEecCC-cCHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccC
Confidence 899999995 69999997643 589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCc-------------------cccccccccccccCcccc-cCCCCCCccchhhHHHHHHHHHhCCCCCc
Q 002883 716 GLSRLLHDNSPDQ-------------------TSTSRVKGSIGYVAPEYG-ALGEVSTHGDEYSFGILMLEMFTGKRPTD 775 (871)
Q Consensus 716 g~a~~~~~~~~~~-------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltG~~pf~ 775 (871)
|+|+......... ......+||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 174 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp TTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 9998875432110 123456799999999975 56679999999999999999998665554
Q ss_pred hhhhhh---------------------------hhHHHHh-hhCCCch--hhhhcChhHHHHHHHHHhhhhhhcCchhHH
Q 002883 776 DMFEEG---------------------------LSLHKYA-KMGLPDQ--VAEIIDPAILEEALEIQAGIVKELQPNLRA 825 (871)
Q Consensus 776 ~~~~~~---------------------------~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (871)
...... ..+.... ..+.|.. ...+..+.. .................
T Consensus 254 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 329 (432)
T 3n9x_A 254 NDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEV----IKYIKLFPHRKPINLKQ 329 (432)
T ss_dssp SSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHH----HHHHHTSCCCCCCCHHH
T ss_pred cccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHH----HHHHHhCCCCCCCCHHH
Confidence 321110 0000000 1111111 111111111 11111111222222333
Q ss_pred hHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 826 KFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 826 ~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.++.+...+.+++.+||+.||++|||++|+++
T Consensus 330 ~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 361 (432)
T 3n9x_A 330 KYPSISDDGINLLESMLKFNPNKRITIDQALD 361 (432)
T ss_dssp HSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 34456778899999999999999999999986
No 107
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=9.1e-41 Score=362.75 Aligned_cols=276 Identities=23% Similarity=0.327 Sum_probs=216.0
Q ss_pred HHhhcCCCCCceeeccccceEEEEEECCCCc-----EEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCccceeeeeecc
Q 002883 555 LKATEGFSSANLIGIGGYGYVYKGILGTEET-----NVAVKVLDLQQ-RGASKSFIAECEALRSI-RHRNLVKIITSCSS 627 (871)
Q Consensus 555 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 627 (871)
....++|++.+.||+|+||.||+|.+..+++ .||+|++.... ....+.+.+|+++++.+ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3445789999999999999999999976554 79999996543 23456788999999999 89999999999876
Q ss_pred cCcCCCceeeEEEeccCCCCHHHHhhccccccc-------ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 002883 628 IDTRGNEFKALVYEFMPNGSLENWLNQKEDEQN-------QRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPS 700 (871)
Q Consensus 628 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~ 700 (871)
. ...++||||+++|+|.+++........ ....+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 122 ~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 193 (333)
T 2i1m_A 122 G-----GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR 193 (333)
T ss_dssp S-----SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred C-----CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccc
Confidence 5 568999999999999999976532100 022579999999999999999999999 9999999999
Q ss_pred ceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhh
Q 002883 701 NVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFE 779 (871)
Q Consensus 701 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~ 779 (871)
||+++.++.+||+|||++....... .........+|+.|+|||.+.+..++.++|||||||++|+|+| |..||.....
T Consensus 194 NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 272 (333)
T 2i1m_A 194 NVLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272 (333)
T ss_dssp GCEEEGGGEEEBCCCGGGCCGGGCT-TSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS
T ss_pred eEEECCCCeEEECcccccccccccc-ceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch
Confidence 9999999999999999998765432 1222333457889999999888899999999999999999999 9999975432
Q ss_pred hhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHH
Q 002883 780 EGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMEL 859 (871)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L 859 (871)
.... .............. ..+..+.+++.+||+.||++|||+.|+++.|
T Consensus 273 ~~~~-~~~~~~~~~~~~~~------------------------------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 321 (333)
T 2i1m_A 273 NSKF-YKLVKDGYQMAQPA------------------------------FAPKNIYSIMQACWALEPTHRPTFQQICSFL 321 (333)
T ss_dssp SHHH-HHHHHHTCCCCCCT------------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hHHH-HHHHhcCCCCCCCC------------------------------CCCHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence 2111 11111111000000 1124567899999999999999999999999
Q ss_pred HHHHHHHHhhc
Q 002883 860 QEAQKMRQAIK 870 (871)
Q Consensus 860 ~~i~~~~~~~~ 870 (871)
+++.+..++.+
T Consensus 322 ~~~~~~~~~~r 332 (333)
T 2i1m_A 322 QEQAQEDRRER 332 (333)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHhhhccC
Confidence 99987776653
No 108
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.4e-40 Score=350.54 Aligned_cols=259 Identities=24% Similarity=0.407 Sum_probs=206.6
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
..++|++.+.||+|+||+||+|.+. ++..||+|+++.... ..+.+.+|++++++++||||+++++++.+. ...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 94 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ-----RPI 94 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----SSE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecC-----CCe
Confidence 3568999999999999999999987 677899999975443 346789999999999999999999998665 568
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 165 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREMRH------RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFG 165 (283)
T ss_dssp EEEECCCTTCBHHHHHHCGGG------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTT
T ss_pred EEEEeccCCCcHHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccc
Confidence 999999999999999976432 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
.+....... ........+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||.......... .........
T Consensus 166 ~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~--~~~~~~~~~ 241 (283)
T 3gen_A 166 LSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE--HIAQGLRLY 241 (283)
T ss_dssp GGGGBCCHH--HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH--HHHTTCCCC
T ss_pred ccccccccc--cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH--HHhcccCCC
Confidence 998664321 111223346788999999888899999999999999999998 999997543322111 111110000
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
... .....+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 242 ~~~------------------------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 242 RPH------------------------------LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp CCT------------------------------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC------------------------------cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 000 1123567899999999999999999999999988653
No 109
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.2e-40 Score=353.77 Aligned_cols=262 Identities=26% Similarity=0.425 Sum_probs=196.9
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
..++|++.+.||+|+||+||+|++.. .||+|+++... ....+.+.+|++++++++||||+++++++.. .
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~ 92 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA------P 92 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------S
T ss_pred CccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC------C
Confidence 45789999999999999999998753 59999996443 3345678999999999999999999997532 4
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..++||||+++++|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~D 163 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHASET------KFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGD 163 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC---------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECC
T ss_pred ccEEEEEecCCCcHHHHHhhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEcc
Confidence 47899999999999999975432 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA---LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
||.+....... .........||+.|+|||.+. +..++.++||||+|+++|+|++|+.||.................
T Consensus 164 fg~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 242 (289)
T 3og7_A 164 FGLATEKSRWS-GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS 242 (289)
T ss_dssp CC-------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTS
T ss_pred ceecccccccc-ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccc
Confidence 99998654322 122233456899999999875 66788999999999999999999999976433322222222211
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK 864 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~ 864 (871)
.+...... ...++..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 243 ~~~~~~~~---------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 243 LSPDLSKV---------------------------RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCCCTTSS---------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cCcchhhc---------------------------cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 11111111 01233567899999999999999999999999998753
No 110
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.3e-40 Score=360.04 Aligned_cols=260 Identities=23% Similarity=0.384 Sum_probs=201.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcE----EEEEEeecc-ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETN----VAVKVLDLQ-QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
.++|++.+.||+|+||+||+|++..+++. ||+|.+... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 89 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS----
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC----
Confidence 35799999999999999999998777665 577777432 233457889999999999999999999998753
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
..++|+||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 90 --~~~~v~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl 158 (327)
T 3poz_A 90 --TVQLITQLMPFGCLLDYVREHKD------NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKI 158 (327)
T ss_dssp --SEEEEEECCTTCBHHHHHHHSTT------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEE
T ss_pred --CeEEEEEecCCCcHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEE
Confidence 36899999999999999977542 589999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~ 791 (871)
+|||+|+........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||........ .......
T Consensus 159 ~Dfg~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~~~~~ 235 (327)
T 3poz_A 159 TDFGLAKLLGAEEKE-YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--SSILEKG 235 (327)
T ss_dssp CCTTHHHHHTTTCC--------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHHTT
T ss_pred ccCcceeEccCCccc-ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH--HHHHHcC
Confidence 999999877544322 22233457889999999999999999999999999999999 9999975432221 1111111
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
...... ..+...+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 236 ~~~~~~------------------------------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 236 ERLPQP------------------------------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCCCCC------------------------------TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred CCCCCC------------------------------ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 000000 01233567899999999999999999999999988654
No 111
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.6e-40 Score=366.99 Aligned_cols=287 Identities=16% Similarity=0.177 Sum_probs=206.9
Q ss_pred hhcCCCCCceeecc--ccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 557 ATEGFSSANLIGIG--GYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 557 ~~~~y~~~~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
..++|++.+.||+| +||+||+|++..+++.||||+++... ....+.+.+|+++++.++||||+++++++.+.
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 98 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD---- 98 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC----
Confidence 45789999999999 99999999999999999999996543 33456788899999999999999999998765
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
...|+||||+++|+|.+++...... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 99 -~~~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl 169 (389)
T 3gni_B 99 -NELWVVTSFMAYGSAKDLICTHFMD-----GMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYL 169 (389)
T ss_dssp -TEEEEEEECCTTCBHHHHHHHTCTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEE
T ss_pred -CEEEEEEEccCCCCHHHHHhhhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEE
Confidence 6789999999999999999775322 589999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCC----CccccccccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHH
Q 002883 713 GDFGLSRLLHDNSP----DQTSTSRVKGSIGYVAPEYGAL--GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHK 786 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~ 786 (871)
+|||.+........ .........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||............
T Consensus 170 ~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 249 (389)
T 3gni_B 170 SGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK 249 (389)
T ss_dssp CCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC
T ss_pred cccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 99999875532211 1111223468999999999877 57899999999999999999999999764332221111
Q ss_pred HhhhCCCchh-------hhhc--------ChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCC
Q 002883 787 YAKMGLPDQV-------AEII--------DPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMK 851 (871)
Q Consensus 787 ~~~~~~~~~~-------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 851 (871)
.....+... .... .......... .............+....+...+.+++.+||+.||++|||
T Consensus 250 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt 327 (389)
T 3gni_B 250 -LNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTT-STPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327 (389)
T ss_dssp ----------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCC
T ss_pred -hcCCCCcccccccccccccccccccccccccccccccc-CccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCC
Confidence 111000000 0000 0000000000 0000000000011122345567899999999999999999
Q ss_pred HHHHHHH
Q 002883 852 IQDAIME 858 (871)
Q Consensus 852 a~evl~~ 858 (871)
+.|+++.
T Consensus 328 a~ell~h 334 (389)
T 3gni_B 328 ASTLLNH 334 (389)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999853
No 112
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1e-40 Score=366.57 Aligned_cols=275 Identities=18% Similarity=0.258 Sum_probs=207.5
Q ss_pred hcCCCCCceeeccccceEEEEEECCC-----CcEEEEEEeeccccch-----------HHHHHHHHHHHHcCCCCcccee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTE-----ETNVAVKVLDLQQRGA-----------SKSFIAECEALRSIRHRNLVKI 621 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~~ 621 (871)
.++|++.+.||+|+||+||+|.+..+ ++.||||++....... ......|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 45899999999999999999999754 5789999986543211 1233455666777889999999
Q ss_pred eeeecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCc
Q 002883 622 ITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSN 701 (871)
Q Consensus 622 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 701 (871)
++++... ..+..+.|+||||+ +++|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|
T Consensus 114 ~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~~~~------~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~N 182 (364)
T 3op5_A 114 WGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEANAK------RFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASN 182 (364)
T ss_dssp EEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred Eeeeeec-cCCcceEEEEEeCC-CCCHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHH
Confidence 9998764 33346689999999 9999999976432 599999999999999999999999 99999999999
Q ss_pred eeeC--CCCceEEeecccceecCCCCCCc----cccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCc
Q 002883 702 VLLD--NEMVAHVGDFGLSRLLHDNSPDQ----TSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTD 775 (871)
Q Consensus 702 ill~--~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~ 775 (871)
|+++ .++.+||+|||+|+.+....... .......||+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~ 262 (364)
T 3op5_A 183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWE 262 (364)
T ss_dssp EEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9998 88999999999998765432111 11133459999999999999999999999999999999999999998
Q ss_pred hhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHH
Q 002883 776 DMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDA 855 (871)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~ev 855 (871)
....+.... ............++.++.+. ...++.++.+++..|++.||++||++.++
T Consensus 263 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~li~~cl~~~p~~RP~~~~l 320 (364)
T 3op5_A 263 DNLKDPKYV-RDSKIRYRENIASLMDKCFP---------------------AANAPGEIAKYMETVKLLDYTEKPLYENL 320 (364)
T ss_dssp GGTTCHHHH-HHHHHHHHHCHHHHHHHHSC---------------------TTCCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred ccccCHHHH-HHHHHHhhhhHHHHHHHhcc---------------------cccCHHHHHHHHHHHhcCCCCCCCCHHHH
Confidence 643221111 11111001111111111000 01234578899999999999999999999
Q ss_pred HHHHHHHHHH
Q 002883 856 IMELQEAQKM 865 (871)
Q Consensus 856 l~~L~~i~~~ 865 (871)
++.|+++.+.
T Consensus 321 ~~~l~~~~~~ 330 (364)
T 3op5_A 321 RDILLQGLKA 330 (364)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988664
No 113
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.4e-40 Score=357.78 Aligned_cols=271 Identities=23% Similarity=0.357 Sum_probs=196.0
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCc---EEEEEEeecc--ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEET---NVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 631 (871)
..++|++.+.||+|+||+||+|++..++. .||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45689999999999999999999876664 8999999654 334457889999999999999999999998765332
Q ss_pred C-CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCce
Q 002883 632 G-NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA 710 (871)
Q Consensus 632 ~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 710 (871)
+ ....++||||+++|+|.+++....... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGE-NPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC----CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccc-cccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 1 123489999999999999997654221 122589999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhh
Q 002883 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAK 789 (871)
Q Consensus 711 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~ 789 (871)
||+|||.|......... .......+++.|+|||.+.+..++.++|||||||++|+|++ |+.||........ ......
T Consensus 177 kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~~~~~~ 254 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYY-RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-YNYLIG 254 (323)
T ss_dssp EECCCCC------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HHHHHT
T ss_pred EEeeccccccccccccc-cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH-HHHHhc
Confidence 99999999876543211 22223456889999999988999999999999999999999 9999975432221 111111
Q ss_pred hCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883 790 MGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK 864 (871)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~ 864 (871)
...... + ..+...+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 255 ~~~~~~------------------------~-------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 255 GNRLKQ------------------------P-------PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp TCCCCC------------------------C-------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCC------------------------C-------CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 100000 0 0123457799999999999999999999999998864
No 114
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=362.85 Aligned_cols=248 Identities=19% Similarity=0.261 Sum_probs=198.3
Q ss_pred CCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeEEEec
Q 002883 563 SANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVYEF 642 (871)
Q Consensus 563 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 642 (871)
..+.||+|+||.||+|++..+++.||+|+++.......+.+.+|++++++++||||+++++++.+. ...++||||
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~lv~E~ 167 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESK-----NDIVLVMEY 167 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----SEEEEEEEC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-----CEEEEEEeC
Confidence 367899999999999999989999999999876655667899999999999999999999998765 668999999
Q ss_pred cCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee--CCCCceEEeeccccee
Q 002883 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL--DNEMVAHVGDFGLSRL 720 (871)
Q Consensus 643 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill--~~~~~~kl~Dfg~a~~ 720 (871)
+++++|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||++..
T Consensus 168 ~~~~~L~~~l~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~ 238 (373)
T 2x4f_A 168 VDGGELFDRIIDESY------NLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARR 238 (373)
T ss_dssp CTTCEEHHHHHHTGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred CCCCcHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence 999999999875432 489999999999999999999999 99999999999999 6778999999999987
Q ss_pred cCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchhhhhc
Q 002883 721 LHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEII 800 (871)
Q Consensus 721 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (871)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .............
T Consensus 239 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~~----- 308 (373)
T 2x4f_A 239 YKPRE----KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-TLNNILACRWDLE----- 308 (373)
T ss_dssp CCTTC----BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCSC-----
T ss_pred cCCcc----ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCCCC-----
Confidence 75432 1223469999999999988889999999999999999999999997543221 1111111111000
Q ss_pred ChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 801 DPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...+..+..++.+++.+||+.||++|||+.|+++
T Consensus 309 -----------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 309 -----------------------DEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -----------------------SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -----------------------hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0011123456789999999999999999999997
No 115
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.5e-40 Score=352.94 Aligned_cols=277 Identities=23% Similarity=0.320 Sum_probs=210.5
Q ss_pred hcCCCCCceeeccccceEEEEE----ECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGI----LGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
.++|++.+.||+|+||.||+|+ +..+++.||+|++.... ....+.+.+|+++++.++||||+++++++....
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG--- 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC---
Confidence 3568999999999999999999 45688999999996433 334578899999999999999999999987542
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
....++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl 167 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNKN------KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKI 167 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHTT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEE
T ss_pred CceEEEEEEeCCCCcHHHHHHhccc------cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEE
Confidence 2557999999999999999966432 589999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
+|||.+.................||..|+|||.+.+..++.++||||+|+++|+|++|..|+......... ... ..
T Consensus 168 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~-~~ 243 (302)
T 4e5w_A 168 GDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLK---MIG-PT 243 (302)
T ss_dssp CCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH---HHC-SC
T ss_pred CcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhh---ccC-Cc
Confidence 99999988765433223344456888999999988888999999999999999999999997643222110 000 00
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQ 863 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~ 863 (871)
.... ....... .......... ...++..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 244 ~~~~-------~~~~~~~---~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 244 HGQM-------TVTRLVN---TLKEGKRLPC---PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CGGG-------HHHHHHH---HHHTTCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccc-------CHHHHHH---HHhccCCCCC---CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0000 0000000 0000000000 0123456889999999999999999999999999875
No 116
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.4e-40 Score=355.05 Aligned_cols=281 Identities=25% Similarity=0.354 Sum_probs=192.9
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
..++|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++... ..
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~ 77 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE-----NK 77 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCT-----TE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEEC-----Ce
Confidence 3468999999999999999999999899999999996543 23346788999999999999999999998765 67
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.|+||||++ |+|.+++...... .....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 78 ~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 152 (317)
T 2pmi_A 78 LTLVFEFMD-NDLKKYMDSRTVG-NTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDF 152 (317)
T ss_dssp EEEEEECCC-CBHHHHHHHHHSS-SCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEEecC-CCHHHHHHhcccc-ccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcC
Confidence 899999997 6999998765321 1122589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
|.+....... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..................+.
T Consensus 153 g~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~ 229 (317)
T 2pmi_A 153 GLARAFGIPV---NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPN 229 (317)
T ss_dssp SSCEETTSCC---CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC
T ss_pred ccceecCCCc---ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9998765322 12233468999999998765 4689999999999999999999999976543322211111111111
Q ss_pred -hh-hhhcC-hhHHHHHHHHHhhhhhhcCchhHHhH-----HHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 -QV-AEIID-PAILEEALEIQAGIVKELQPNLRAKF-----HEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 -~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.. ..... +.... .............. .....++.+++.+||+.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 230 ESLWPSVTKLPKYNP-------NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TTTCGGGGGCTTCCT-------TCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhHhhhhhhhhhccc-------ccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00 00000 00000 00000000000000 023456889999999999999999999986
No 117
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.3e-40 Score=358.53 Aligned_cols=250 Identities=21% Similarity=0.284 Sum_probs=203.0
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 632 (871)
..++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|..++..+ +||+|+++++++.+.
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~---- 93 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM---- 93 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECS----
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcC----
Confidence 4578999999999999999999999889999999996432 23456788999999988 899999999998765
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
...|+||||++||+|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+||+++.++.+||
T Consensus 94 -~~~~lv~E~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL 162 (353)
T 2i0e_A 94 -DRLYFVMEYVNGGDLMYHIQQVG-------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKI 162 (353)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred -CEEEEEEeCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEE
Confidence 67899999999999999997644 589999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
+|||+|+..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||........ .........
T Consensus 163 ~DFG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-~~~i~~~~~ 238 (353)
T 2i0e_A 163 ADFGMCKENIWD---GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-FQSIMEHNV 238 (353)
T ss_dssp CCCTTCBCCCCT---TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC
T ss_pred EeCCcccccccC---CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH-HHHHHhCCC
Confidence 999999864322 1223345799999999999999999999999999999999999999975432211 111111100
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCC-----HHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMK-----IQDAIM 857 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----a~evl~ 857 (871)
. . + .....++.+++.+||+.||++||+ ++|+++
T Consensus 239 ~--~-----------------------p-------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 A--Y-----------------------P-------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp C--C-----------------------C-------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred C--C-----------------------C-------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0 0 0 012345678999999999999996 466654
No 118
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.7e-40 Score=355.33 Aligned_cols=201 Identities=26% Similarity=0.336 Sum_probs=177.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 633 (871)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|..+++++ +||||+++++++.+.
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~----- 82 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE----- 82 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC-----
Confidence 467999999999999999999999999999999996542 23345678999999988 899999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...|+||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 83 ~~~~lv~e~~~gg~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~ 152 (345)
T 3a8x_A 83 SRLFFVIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLT 152 (345)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEE
Confidence 67899999999999999997643 589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCch
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDD 776 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 776 (871)
|||+|+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 153 DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 153 DYGMCKEGLRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp CGGGCBCSCCTT---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eccccccccCCC---CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 999998643221 223345799999999999999999999999999999999999999964
No 119
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=7.4e-40 Score=353.33 Aligned_cols=252 Identities=22% Similarity=0.312 Sum_probs=205.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc------chHHHHHHHHHHHHcCCCCccceeeeeecccCcC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR------GASKSFIAECEALRSIRHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 631 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 87 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR--- 87 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC---
Confidence 3569999999999999999999998999999999964432 1357789999999999999999999998765
Q ss_pred CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC---
Q 002883 632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM--- 708 (871)
Q Consensus 632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~--- 708 (871)
...++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 88 --~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~ 155 (321)
T 2a2a_A 88 --TDVVLILELVSGGELFDFLAQKE-------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPI 155 (321)
T ss_dssp --SEEEEEECCCCSCBHHHHHHTCS-------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSS
T ss_pred --CEEEEEEEcCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCc
Confidence 67899999999999999997643 589999999999999999999999 999999999999999887
Q ss_pred -ceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHH
Q 002883 709 -VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKY 787 (871)
Q Consensus 709 -~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~ 787 (871)
.+||+|||.+....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||........ ....
T Consensus 156 ~~~kl~Dfg~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i 230 (321)
T 2a2a_A 156 PHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANI 230 (321)
T ss_dssp CCEEECCCTTCEECCTTC----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHH
T ss_pred CCEEEccCccceecCccc----cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH-HHHH
Confidence 79999999998765432 12334689999999999989999999999999999999999999975432211 1111
Q ss_pred hhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 788 AKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...... .++ .........+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~------~~~----------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 231 TSVSYD------FDE----------------------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HTTCCC------CCH----------------------HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred Hhcccc------cCh----------------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111000 000 011123456789999999999999999999986
No 120
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.7e-40 Score=362.02 Aligned_cols=215 Identities=24% Similarity=0.324 Sum_probs=183.8
Q ss_pred cccccccCHHHHHHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-----CCc
Q 002883 543 EDKYLKISYAELLKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-----HRN 617 (871)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~n 617 (871)
++....+++.+.....++|++.+.||+|+||+||+|++..+++.||||+++... ...+.+..|+++++.+. |||
T Consensus 19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~ 97 (360)
T 3llt_A 19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNN 97 (360)
T ss_dssp -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCC
Confidence 344445555555556689999999999999999999999899999999996432 34466788999999986 999
Q ss_pred cceeeeeecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 002883 618 LVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL 697 (871)
Q Consensus 618 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 697 (871)
|+++++++... ...++||||+ +++|.+++...... .+++..++.++.||+.||+|||+. +|+||||
T Consensus 98 iv~~~~~~~~~-----~~~~lv~e~~-~~~L~~~~~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl 163 (360)
T 3llt_A 98 IVKYHGKFMYY-----DHMCLIFEPL-GPSLYEIITRNNYN-----GFHIEDIKLYCIEILKALNYLRKM---SLTHTDL 163 (360)
T ss_dssp BCCEEEEEEET-----TEEEEEECCC-CCBHHHHHHHTTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred eecccceeeEC-----CeeEEEEcCC-CCCHHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCC
Confidence 99999998765 6789999999 99999999875432 589999999999999999999999 9999999
Q ss_pred CCCceeeCC-------------------------CCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCC
Q 002883 698 KPSNVLLDN-------------------------EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVS 752 (871)
Q Consensus 698 kp~Nill~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 752 (871)
||+||+++. ++.+||+|||+|...... .....||+.|+|||++.+..++
T Consensus 164 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~ 237 (360)
T 3llt_A 164 KPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY------HGSIINTRQYRAPEVILNLGWD 237 (360)
T ss_dssp SGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC------CCSCCSCGGGCCHHHHTTCCCC
T ss_pred CcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC------CcCccCcccccCcHHHcCCCCC
Confidence 999999975 789999999999875432 2235689999999999999999
Q ss_pred CccchhhHHHHHHHHHhCCCCCchhh
Q 002883 753 THGDEYSFGILMLEMFTGKRPTDDMF 778 (871)
Q Consensus 753 ~~~DiwSlG~il~elltG~~pf~~~~ 778 (871)
.++||||+||++|+|++|+.||....
T Consensus 238 ~~~DiwslG~il~ell~g~~pf~~~~ 263 (360)
T 3llt_A 238 VSSDMWSFGCVLAELYTGSLLFRTHE 263 (360)
T ss_dssp TTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CccchHHHHHHHHHHHHCCCCCCCCc
Confidence 99999999999999999999997543
No 121
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-40 Score=361.60 Aligned_cols=279 Identities=20% Similarity=0.239 Sum_probs=205.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-CCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT-RGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+++++.++||||+++++++..... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 36799999999999999999999999999999998533 23345678899999999999999999999866422 1224
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--------~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 171 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--------KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILD 171 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred eEEEEEecC-CCCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEe
Confidence 569999999 88999999753 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
||+|+..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||................+.+
T Consensus 172 fg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~ 245 (367)
T 1cm8_A 172 FGLARQADSE------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP 245 (367)
T ss_dssp CTTCEECCSS------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred eecccccccc------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 9999875432 223568999999998776 678999999999999999999999998643332221111122222
Q ss_pred -chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 794 -DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 794 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
......+.......+. ..............+......+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 246 PAEFVQRLQSDEAKNYM---KGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CHHHHHTCSCHHHHHHH---HHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CHHHHHHhhhHHHHHHH---HhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 2222222211111111 111111111222223344567889999999999999999999987
No 122
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.8e-40 Score=351.05 Aligned_cols=262 Identities=24% Similarity=0.398 Sum_probs=213.8
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
..++|++.+.||+|+||+||+|.+..+++.||+|++.... ...+.+.+|++++++++||||+++++++.+. ...
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 84 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPF 84 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SSE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccC-----CCE
Confidence 4568999999999999999999999889999999996543 3457889999999999999999999998665 568
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
++||||+++++|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg 156 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNRQ-----EVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFG 156 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCTT-----TSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred EEEEEcCCCCcHHHHHHhcccC-----CccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCc
Confidence 9999999999999999765422 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
.+....... ........+++.|+|||.+.+..++.++||||+|+++|+|++ |..||........ ...........
T Consensus 157 ~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~--~~~~~~~~~~~ 232 (288)
T 3kfa_A 157 LSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--YELLEKDYRME 232 (288)
T ss_dssp GGGTSCSSS--SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHHHHTTCCCC
T ss_pred cceeccCCc--cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHhccCCCC
Confidence 998765332 223334457889999999988899999999999999999999 9999975322211 11111110000
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
.. ..++..+.+++.+|++.||++|||+.|+++.|+.+....
T Consensus 233 ~~------------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 233 RP------------------------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CC------------------------------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 00 022345779999999999999999999999999886543
No 123
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.4e-40 Score=361.52 Aligned_cols=284 Identities=20% Similarity=0.241 Sum_probs=212.9
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++...........
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999999999999999996433 3334678899999999999999999999877654555678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
|+||||++ |+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 173 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--------HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFG 173 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEcccC-cCHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCc
Confidence 99999996 5999998653 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCccccc-CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc-
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA-LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD- 794 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~- 794 (871)
.+.................||+.|+|||++. ...++.++||||+||++|+|++|+.||..................+.
T Consensus 174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 253 (364)
T 3qyz_A 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253 (364)
T ss_dssp TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCH
T ss_pred ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 9987654322222234457999999999754 45589999999999999999999999976543322222111111111
Q ss_pred -hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 -QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
....+.+..... . ...............+.....++.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 254 EDLNCIINLKARN-Y---LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHTCCCHHHHH-H---HHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhhhhhHHH-H---HHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111111111100 0 0000000111111222234567889999999999999999999986
No 124
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=353.78 Aligned_cols=269 Identities=21% Similarity=0.251 Sum_probs=210.5
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||.||+|++..+++.||||++........+.+.+|+++++.++||||+++++++... .......|
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE-RGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE-ETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec-cCCCceeE
Confidence 46899999999999999999999889999999999766666677899999999999999999999998643 22236789
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL 717 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 717 (871)
+||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDK---GNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred EEEEeCCCCcHHHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 999999999999999764221 23689999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCc------cccccccccccccCcccccCCC---CCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHh
Q 002883 718 SRLLHDNSPDQ------TSTSRVKGSIGYVAPEYGALGE---VSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYA 788 (871)
Q Consensus 718 a~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~ 788 (871)
+.......... .......||+.|+|||++.+.. +++++|||||||++|+|++|+.||..............
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 87653211010 0112345799999999876544 68999999999999999999999976433322221111
Q ss_pred hhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHH
Q 002883 789 KMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQ 863 (871)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~ 863 (871)
........ ...+...+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 261 ~~~~~~~~------------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 261 QNQLSIPQ------------------------------SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HCC--CCC------------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred hccCCCCc------------------------------cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 11000000 0122345779999999999999999999999998774
No 125
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3e-40 Score=361.47 Aligned_cols=253 Identities=21% Similarity=0.233 Sum_probs=193.3
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||+||+|++..+++.||||++..... ..+.+.+|+.+++.++||||+++++++.+. ...|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~~ 92 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTP-----THLA 92 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECS-----SEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeC-----CEEE
Confidence 4689999999999999999999999999999999965433 346788999999999999999999998765 6789
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc--eEEeec
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV--AHVGDF 715 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Df 715 (871)
+||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Df 162 (361)
T 3uc3_A 93 IIMEYASGGELYERICNAG-------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDF 162 (361)
T ss_dssp EEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCC
T ss_pred EEEEeCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeec
Confidence 9999999999999997643 589999999999999999999999 9999999999999987765 999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCCCCCc-cchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhh-hCCC
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTH-GDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAK-MGLP 793 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~-~~~~ 793 (871)
|+|+..... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||............... ....
T Consensus 163 g~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 238 (361)
T 3uc3_A 163 GYSKSSVLH----SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK 238 (361)
T ss_dssp CCC-------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTC
T ss_pred Ccccccccc----CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCC
Confidence 999753322 12233569999999999888777655 89999999999999999999864332111110000 0000
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
.. .+. ...+...+.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~-----------------------~~~-----~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 239 YS-----------------------IPD-----DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CC-----------------------CCT-----TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CC-----------------------CCC-----cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00 000 00123456789999999999999999999874
No 126
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=8.1e-40 Score=346.77 Aligned_cols=253 Identities=19% Similarity=0.306 Sum_probs=205.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-----SF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----SE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcC-----CE
Confidence 468999999999999999999999999999999996543 23346788999999999999999999998765 66
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc---eEE
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV---AHV 712 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl 712 (871)
.++||||+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl 149 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVARE-------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKL 149 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEE
Confidence 899999999999999887653 589999999999999999999999 9999999999999986655 999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
+|||.+....... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||........ .........
T Consensus 150 ~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~ 224 (284)
T 3kk8_A 150 ADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL-YAQIKAGAY 224 (284)
T ss_dssp CCCTTCEECCSSC----BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCC
T ss_pred eeceeeEEcccCc----cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH-HHHHHhccc
Confidence 9999998765432 22335689999999999999999999999999999999999999975432211 111111111
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
.... +....+..++.+++.+||+.||++|||+.|+++.
T Consensus 225 ~~~~----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 225 DYPS----------------------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CCCT----------------------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred cCCc----------------------------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000 0001223457789999999999999999999874
No 127
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-40 Score=355.56 Aligned_cols=264 Identities=28% Similarity=0.456 Sum_probs=202.0
Q ss_pred hcCCCCCceeeccccceEEEEEECCC----CcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTE----ETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
..+|++.+.||+|+||+||+|++..+ +..||||+++... ......+.+|++++++++||||+++++++...
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 118 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY---- 118 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS----
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC----
Confidence 35788899999999999999998644 3469999996543 23345788999999999999999999998654
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
...++||||+++|+|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 119 -~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl 188 (333)
T 1mqb_A 119 -KPMMIITEYMENGALDKFLREKDG------EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKV 188 (333)
T ss_dssp -SSEEEEEECCTTEEHHHHHHHTTT------CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEE
T ss_pred -CCcEEEEeCCCCCcHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEE
Confidence 568999999999999999976432 589999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~ 791 (871)
+|||.+.................+|+.|+|||.+.+..++.++|||||||++|||++ |+.||........ .......
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~--~~~~~~~ 266 (333)
T 1mqb_A 189 SDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV--MKAINDG 266 (333)
T ss_dssp CCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHHHTT
T ss_pred CCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH--HHHHHCC
Confidence 999999876543222222233446789999999988899999999999999999999 9999975432211 1111110
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQ 867 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~~ 867 (871)
..... ...+...+.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 267 ~~~~~------------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 267 FRLPT------------------------------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp CCCCC------------------------------CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred CcCCC------------------------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 00000 00123457789999999999999999999999999876544
No 128
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=8.5e-41 Score=369.59 Aligned_cols=256 Identities=21% Similarity=0.285 Sum_probs=206.1
Q ss_pred HHHHHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeeccc
Q 002883 552 AELLKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSI 628 (871)
Q Consensus 552 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 628 (871)
.++....++|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344456688999999999999999999999999999999996422 12234578899999999999999999998765
Q ss_pred CcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC
Q 002883 629 DTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM 708 (871)
Q Consensus 629 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 708 (871)
...|+||||++||+|.+++... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 142 -----~~~~lV~E~~~gg~L~~~l~~~--------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g 205 (410)
T 3v8s_A 142 -----RYLYMVMEYMPGGDLVNLMSNY--------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSG 205 (410)
T ss_dssp -----SEEEEEECCCTTEEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred -----CEEEEEEeCCCCCcHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCC
Confidence 6789999999999999999653 489999999999999999999999 999999999999999999
Q ss_pred ceEEeecccceecCCCCCCccccccccccccccCcccccCCC----CCCccchhhHHHHHHHHHhCCCCCchhhhhhhhH
Q 002883 709 VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE----VSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSL 784 (871)
Q Consensus 709 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~ 784 (871)
.+||+|||+|+...... .......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||........ .
T Consensus 206 ~ikL~DFG~a~~~~~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-~ 282 (410)
T 3v8s_A 206 HLKLADFGTCMKMNKEG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-Y 282 (410)
T ss_dssp CEEECCCTTCEECCTTS--EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-H
T ss_pred CEEEeccceeEeeccCC--cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH-H
Confidence 99999999998765431 12233467999999999877654 78999999999999999999999975332211 1
Q ss_pred HHHhh----hCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCC--CCCHHHHHHH
Q 002883 785 HKYAK----MGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRD--RMKIQDAIME 858 (871)
Q Consensus 785 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPta~evl~~ 858 (871)
..... ..+|. ...+..++.+++.+||..+|++ ||+++|+++.
T Consensus 283 ~~i~~~~~~~~~p~--------------------------------~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 283 SKIMNHKNSLTFPD--------------------------------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHHTHHHHCCCCT--------------------------------TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred HHHHhccccccCCC--------------------------------cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 11110 00010 0012345678999999999998 9999999863
No 129
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4e-40 Score=346.54 Aligned_cols=254 Identities=24% Similarity=0.377 Sum_probs=193.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc----chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR----GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
.++|++.+.||+|+||.||+|++. ++.||||+++.... ...+.+.+|+++++.++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE----- 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-----
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC-----
Confidence 468999999999999999999984 78999999854322 2346788999999999999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-------
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN------- 706 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~------- 706 (871)
...++||||+++++|.+++... .+++..++.++.|++.||+|||+....+|+||||||+||+++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~--------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~ 150 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLSGK--------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDL 150 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTSS--------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCC
T ss_pred CceEEEEEcCCCCCHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccc
Confidence 5689999999999999998642 5899999999999999999999992112999999999999985
Q ss_pred -CCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHH
Q 002883 707 -EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLH 785 (871)
Q Consensus 707 -~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~ 785 (871)
++.+||+|||.+....... .....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||...........
T Consensus 151 ~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 225 (271)
T 3dtc_A 151 SNKILKITDFGLAREWHRTT-----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG 225 (271)
T ss_dssp SSCCEEECCCCC------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH
T ss_pred cCcceEEccCCccccccccc-----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHh
Confidence 7789999999998654322 2234689999999998888999999999999999999999999986433222111
Q ss_pred HHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHH
Q 002883 786 KYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEA 862 (871)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i 862 (871)
.. ......... ..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 226 ~~-~~~~~~~~~------------------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 226 VA-MNKLALPIP------------------------------STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HH-TSCCCCCCC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hh-cCCCCCCCC------------------------------cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11 111100000 01234577899999999999999999999999864
No 130
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.3e-40 Score=351.98 Aligned_cols=251 Identities=24% Similarity=0.380 Sum_probs=202.8
Q ss_pred hcCCCCCceeeccccceEEEEEECCCC-------cEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEE-------TNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT 630 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 630 (871)
.++|++.+.||+|+||+||+|++..++ ..||+|++........+.+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG-- 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT--
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC--
Confidence 467999999999999999999987665 47999999776666778899999999999999999999998765
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc-
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV- 709 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~- 709 (871)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 85 ---~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 152 (289)
T 4fvq_A 85 ---DENILVQEFVKFGSLDTYLKKNKN------CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDR 152 (289)
T ss_dssp ---TCCEEEEECCTTCBHHHHHHHTGG------GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBG
T ss_pred ---CCCEEEEECCCCCCHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcc
Confidence 557999999999999999987542 389999999999999999999999 9999999999999988876
Q ss_pred -------eEEeecccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhh
Q 002883 710 -------AHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG 781 (871)
Q Consensus 710 -------~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~ 781 (871)
+||+|||.+..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|..|+.......
T Consensus 153 ~~~~~~~~kl~Dfg~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~ 225 (289)
T 4fvq_A 153 KTGNPPFIKLSDPGISITVLP-------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ 225 (289)
T ss_dssp GGTBCCEEEECCCCSCTTTSC-------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred cccccceeeeccCcccccccC-------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH
Confidence 99999999865421 223458899999998876 678999999999999999999655443322111
Q ss_pred hhHHHHhh-hCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHH
Q 002883 782 LSLHKYAK-MGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQ 860 (871)
Q Consensus 782 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~ 860 (871)
........ ...+. ....++.+++.+||+.||++|||+.|+++.|+
T Consensus 226 ~~~~~~~~~~~~~~----------------------------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 271 (289)
T 4fvq_A 226 RKLQFYEDRHQLPA----------------------------------PKAAELANLINNCMDYEPDHRPSFRAIIRDLN 271 (289)
T ss_dssp HHHHHHHTTCCCCC----------------------------------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhhccCCCCC----------------------------------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11111100 00000 01224668999999999999999999999998
Q ss_pred HHH
Q 002883 861 EAQ 863 (871)
Q Consensus 861 ~i~ 863 (871)
++.
T Consensus 272 ~l~ 274 (289)
T 4fvq_A 272 SLF 274 (289)
T ss_dssp TCC
T ss_pred Hhc
Confidence 764
No 131
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=6.1e-40 Score=369.23 Aligned_cols=248 Identities=26% Similarity=0.366 Sum_probs=203.9
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ......+.+|+++++.++||||+++++++... .
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~-----~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP-----S 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----C
Confidence 367999999999999999999999899999999996432 22346789999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~D 159 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICKNG-------RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIAD 159 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTSSS-------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEe
Confidence 6899999999999999997643 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
||++....... ......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+...... ..........
T Consensus 160 FG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~~~i~~~~~~ 234 (476)
T 2y94_A 160 FGLSNMMSDGE----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL-FKKICDGIFY 234 (476)
T ss_dssp CSSCEECCTTC----CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH-HHHHHTTCCC
T ss_pred ccchhhccccc----cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH-HHHHhcCCcC
Confidence 99998765432 2233569999999999888766 6899999999999999999999975322111 1111111000
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
... ....++.+++.+||+.||++|||++|+++
T Consensus 235 --~p~------------------------------~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 235 --TPQ------------------------------YLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp --CCT------------------------------TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --CCc------------------------------cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 000 11235678999999999999999999987
No 132
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.9e-40 Score=348.99 Aligned_cols=269 Identities=24% Similarity=0.336 Sum_probs=200.0
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
++|++.+.||+|+||+||+|++ .+++.||+|++..... ...+.+.+|+++++.++||||+++++++.+. ...
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK-----KRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS-----SCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC-----CeE
Confidence 5799999999999999999999 5789999999954432 2346788999999999999999999998765 668
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
++||||+++ +|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 145 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVCEG------GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFG 145 (288)
T ss_dssp EEEEECCSE-EHHHHHHTSTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTT
T ss_pred EEEEEecCC-CHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECc
Confidence 999999965 99999876432 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
.+....... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..................+..
T Consensus 146 ~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 222 (288)
T 1ob3_A 146 LARAFGIPV---RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNS 222 (288)
T ss_dssp HHHHHCC------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccCccc---cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCCh
Confidence 998764321 12233468999999998765 45899999999999999999999999865433222221111111110
Q ss_pred --hhhh-----cChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 796 --VAEI-----IDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 796 --~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.... .++.. ....+............++.+++.+||+.||++|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 223 KNWPNVTELPKYDPNF-----------TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTSTTGGGSTTCCTTC-----------CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhchhhhccccccccc-----------ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 00000 000000001111123456789999999999999999999986
No 133
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.2e-40 Score=348.32 Aligned_cols=263 Identities=23% Similarity=0.393 Sum_probs=207.0
Q ss_pred hhcCCCCCceeeccccceEEEEEECC---CCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGT---EETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
..++|++.+.||+|+||+||+|++.. ++..||+|++.... ....+.+.+|+++++.++||||+++++++.+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 84 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE----- 84 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-----
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----
Confidence 35689999999999999999999743 34569999996542 3345778999999999999999999998754
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
...|+||||+++++|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 85 -~~~~~v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl 154 (281)
T 3cc6_A 85 -EPTWIIMELYPYGELGHYLERNKN------SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKL 154 (281)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHHTT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEE
T ss_pred -CCCEEEEecCCCCCHHHHHHhccc------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEe
Confidence 235899999999999999976532 489999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~ 791 (871)
+|||.+....... ........+++.|+|||.+.+..++.++||||||+++|+|++ |+.||......... .......
T Consensus 155 ~Dfg~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~-~~~~~~~ 231 (281)
T 3cc6_A 155 GDFGLSRYIEDED--YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGD 231 (281)
T ss_dssp CCCCGGGCC-----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHH-HHHHHTC
T ss_pred CccCCCccccccc--ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHH-HHHhcCC
Confidence 9999998765432 112233457889999999888899999999999999999998 99999753322211 1111100
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHHHh
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQA 868 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~~~ 868 (871)
.. ... ..+...+.+++.+||+.||++|||+.|+++.|+++.+..+.
T Consensus 232 ~~-~~~------------------------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 277 (281)
T 3cc6_A 232 RL-PKP------------------------------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277 (281)
T ss_dssp CC-CCC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred CC-CCC------------------------------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence 00 000 01234577899999999999999999999999999887654
No 134
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4e-40 Score=355.98 Aligned_cols=260 Identities=23% Similarity=0.360 Sum_probs=204.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcE----EEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETN----VAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
.++|++.+.||+|+||+||+|++..+++. ||+|++.... ......+.+|+.++++++||||+++++++..
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----- 86 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG----- 86 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-----
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-----
Confidence 35799999999999999999999877765 7777764322 2233567789999999999999999998753
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 87 -~~~~~v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl 156 (325)
T 3kex_A 87 -SSLQLVTQYLPLGSLLDHVRQHRG------ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQV 156 (325)
T ss_dssp -SSEEEEEECCTTCBSHHHHHSSGG------GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEE
T ss_pred -CccEEEEEeCCCCCHHHHHHHccc------cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEE
Confidence 447899999999999999976532 488999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~ 791 (871)
+|||+++....... ........++..|+|||++.++.++.++|||||||++|+|++ |+.||........ .......
T Consensus 157 ~Dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~~~~ 233 (325)
T 3kex_A 157 ADFGVADLLPPDDK-QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV--PDLLEKG 233 (325)
T ss_dssp CSCSGGGGSCCCTT-CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH--HHHHHTT
T ss_pred CCCCcccccCcccc-cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH--HHHHHcC
Confidence 99999988754432 222334567889999999998899999999999999999999 9999985432211 1111111
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
....... .+...+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 234 ~~~~~~~------------------------------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 234 ERLAQPQ------------------------------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp CBCCCCT------------------------------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred CCCCCCC------------------------------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0000000 1122467899999999999999999999999988543
No 135
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.5e-40 Score=356.91 Aligned_cols=246 Identities=21% Similarity=0.272 Sum_probs=180.0
Q ss_pred CceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccCcCCCceeeEEEec
Q 002883 564 ANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEFKALVYEF 642 (871)
Q Consensus 564 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~ 642 (871)
.+.||+|+||+||+|++..+++.||||++... ....+.+|+.+++.+. ||||+++++++.+. ...|+||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~e~ 87 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQ-----LHTFLVMEL 87 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----SEEEEEECC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC-----CEEEEEEEc
Confidence 47899999999999999999999999999643 3467788999999996 99999999998765 678999999
Q ss_pred cCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC---ceEEeecccce
Q 002883 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM---VAHVGDFGLSR 719 (871)
Q Consensus 643 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfg~a~ 719 (871)
+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++.
T Consensus 88 ~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 157 (325)
T 3kn6_A 88 LNGGELFERIKKKK-------HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFAR 157 (325)
T ss_dssp CCSCBHHHHHHHCS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred cCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccce
Confidence 99999999997653 589999999999999999999999 999999999999997665 89999999998
Q ss_pred ecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhh-----hhHHHHhhhCCCc
Q 002883 720 LLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG-----LSLHKYAKMGLPD 794 (871)
Q Consensus 720 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~-----~~~~~~~~~~~~~ 794 (871)
...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||....... ..........
T Consensus 158 ~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~--- 231 (325)
T 3kn6_A 158 LKPPDN---QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG--- 231 (325)
T ss_dssp ECCC-------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT---
T ss_pred ecCCCC---CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC---
Confidence 765432 22234568999999999999999999999999999999999999998543210 0000000000
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
..+........+..++.+++.+||+.||++|||++|+++
T Consensus 232 ------------------------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 232 ------------------------DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp ------------------------CCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ------------------------CCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 000011112234567889999999999999999998873
No 136
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.5e-40 Score=353.38 Aligned_cols=269 Identities=22% Similarity=0.368 Sum_probs=212.5
Q ss_pred hhcCCCCCceeeccccceEEEEEE-----CCCCcEEEEEEeecccc-chHHHHHHHHHHHHcC-CCCccceeeeeecccC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGIL-----GTEETNVAVKVLDLQQR-GASKSFIAECEALRSI-RHRNLVKIITSCSSID 629 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 629 (871)
..++|++.+.||+|+||.||+|++ ..+++.||+|+++.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~- 99 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG- 99 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC-
Confidence 356899999999999999999985 44678999999965433 3457789999999999 999999999998765
Q ss_pred cCCCceeeEEEeccCCCCHHHHhhccccc-----------ccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 002883 630 TRGNEFKALVYEFMPNGSLENWLNQKEDE-----------QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698 (871)
Q Consensus 630 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 698 (871)
...++||||+++|+|.+++...... ......+++..++.++.|++.||+|||+. +|+|||||
T Consensus 100 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlk 172 (313)
T 1t46_A 100 ----GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172 (313)
T ss_dssp ----SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred ----CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCc
Confidence 5679999999999999999865421 01122489999999999999999999999 99999999
Q ss_pred CCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchh
Q 002883 699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM 777 (871)
Q Consensus 699 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~ 777 (871)
|+||+++.++.+||+|||.+........ ........+|+.|+|||.+.+..++.++|||||||++|+|++ |+.||...
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDSN-YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTT-SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred cceEEEcCCCCEEEcccccccccccccc-ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 9999999999999999999987654321 122333457889999999888899999999999999999999 99999754
Q ss_pred hhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 778 FEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
....... ............ ...+..+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~-~~~~~~~~~~~~------------------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 300 (313)
T 1t46_A 252 PVDSKFY-KMIKEGFRMLSP------------------------------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (313)
T ss_dssp CSSHHHH-HHHHHTCCCCCC------------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cchhHHH-HHhccCCCCCCc------------------------------ccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 3221111 111111000000 012345778999999999999999999999
Q ss_pred HHHHHHHH
Q 002883 858 ELQEAQKM 865 (871)
Q Consensus 858 ~L~~i~~~ 865 (871)
.|+++.+.
T Consensus 301 ~L~~~~~~ 308 (313)
T 1t46_A 301 LIEKQISE 308 (313)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988654
No 137
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-39 Score=349.67 Aligned_cols=262 Identities=20% Similarity=0.229 Sum_probs=201.0
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc---chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
..++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++...
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~----- 106 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID----- 106 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC-----
Confidence 45789999999999999999999998999999999964432 2346788999999999999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...|+||||+++++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~ 176 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRRQG-------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLV 176 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred CeEEEEEEecCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEe
Confidence 67899999999999999998643 589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||.+....... ........|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ..........+
T Consensus 177 Dfg~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~ 252 (309)
T 2h34_A 177 DFGIASATTDEK--LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIP 252 (309)
T ss_dssp SCCC------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCC
T ss_pred cCccCccccccc--cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCC
Confidence 999998764322 12223456899999999998889999999999999999999999999864332 11111111111
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-CHHHHHHHHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-KIQDAIMELQEAQKM 865 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-ta~evl~~L~~i~~~ 865 (871)
.. . .....++.++.+++.+||+.||++|| |++++++.|+.+.+.
T Consensus 253 ~~-~---------------------------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 253 RP-S---------------------------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp CG-G---------------------------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred Cc-c---------------------------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 10 0 00012234577899999999999999 899999999876443
No 138
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.5e-38 Score=361.46 Aligned_cols=348 Identities=29% Similarity=0.384 Sum_probs=256.4
Q ss_pred CCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccccccccCCCCccccccCCCceee
Q 002883 37 LFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDYFA 116 (871)
Q Consensus 37 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 116 (871)
+.+|+.|++++|.++ .+|. +..+++|++|+|++|.++ .+|. ++.+++|++|++++|.+++..+ +.
T Consensus 45 l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~--------- 109 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLT-DITP-LKNLTKLVDILMNNNQIADITP--LA--------- 109 (466)
T ss_dssp HHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCCCGG--GT---------
T ss_pred hccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccC-Cchh-hhccccCCEEECCCCccccChh--hc---------
Confidence 445555555555555 3332 455555555555555555 2232 5555555555555555542221 44
Q ss_pred eeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCCcccccccc
Q 002883 117 VTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLV 196 (871)
Q Consensus 117 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~ 196 (871)
.+++|++|++++|.++ .+|. +..+++|++|++++|++..+ ..+.
T Consensus 110 ----------------~l~~L~~L~L~~n~l~-----------~~~~-~~~l~~L~~L~l~~n~l~~~--------~~~~ 153 (466)
T 1o6v_A 110 ----------------NLTNLTGLTLFNNQIT-----------DIDP-LKNLTNLNRLELSSNTISDI--------SALS 153 (466)
T ss_dssp ----------------TCTTCCEEECCSSCCC-----------CCGG-GTTCTTCSEEEEEEEEECCC--------GGGT
T ss_pred ----------------CCCCCCEEECCCCCCC-----------CChH-HcCCCCCCEEECCCCccCCC--------hhhc
Confidence 4555555555555554 2222 55566666666666665542 2355
Q ss_pred CCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcE
Q 002883 197 NCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQV 276 (871)
Q Consensus 197 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 276 (871)
.+++|++|+++ |.+.+. ..+..+ ++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+ ++.+++|+.
T Consensus 154 ~l~~L~~L~l~-~~~~~~--~~~~~l-~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 225 (466)
T 1o6v_A 154 GLTSLQQLSFG-NQVTDL--KPLANL-TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDE 225 (466)
T ss_dssp TCTTCSEEEEE-ESCCCC--GGGTTC-TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCE
T ss_pred cCCcccEeecC-CcccCc--hhhccC-CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCE
Confidence 56666666665 334322 224444 4577888888877643 348889999999999999996654 788999999
Q ss_pred EEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCC
Q 002883 277 LSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHL 356 (871)
Q Consensus 277 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l 356 (871)
|++++|++++. ..+..+++|+.|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++
T Consensus 226 L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l 299 (466)
T 1o6v_A 226 LSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL 299 (466)
T ss_dssp EECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCC
T ss_pred EECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcc
Confidence 99999999853 468899999999999999996655 8999999999999999995544 88999999999999999
Q ss_pred CCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccc
Q 002883 357 SGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFL 436 (871)
Q Consensus 357 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 436 (871)
++..+ +..+++|+.|++++|++++..| +..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +
T Consensus 300 ~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 371 (466)
T 1o6v_A 300 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--L 371 (466)
T ss_dssp SCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--G
T ss_pred cCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--h
Confidence 96544 8899999999999999997655 88999999999999999975 478999999999999999998777 8
Q ss_pred cccccccEEecCCCcCcccCC
Q 002883 437 NTFRFLQKLNLSFNNLEGEVP 457 (871)
Q Consensus 437 ~~~~~L~~L~l~~N~l~~~~~ 457 (871)
..+++|+.|++++|++++.+.
T Consensus 372 ~~l~~L~~L~l~~n~~~~~p~ 392 (466)
T 1o6v_A 372 ANLTRITQLGLNDQAWTNAPV 392 (466)
T ss_dssp TTCTTCCEEECCCEEEECCCB
T ss_pred hcCCCCCEEeccCCcccCCch
Confidence 999999999999999998543
No 139
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-40 Score=361.91 Aligned_cols=268 Identities=25% Similarity=0.376 Sum_probs=212.3
Q ss_pred hcCCCCCceeeccccceEEEEEECC-------CCcEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCccceeeeeeccc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGT-------EETNVAVKVLDLQQ-RGASKSFIAECEALRSI-RHRNLVKIITSCSSI 628 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 628 (871)
.++|.+.+.||+|+||+||+|++.. .+..||||+++... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 4689999999999999999999743 33579999996543 23346788999999999 999999999998765
Q ss_pred CcCCCceeeEEEeccCCCCHHHHhhcccccc---------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 002883 629 DTRGNEFKALVYEFMPNGSLENWLNQKEDEQ---------NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699 (871)
Q Consensus 629 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 699 (871)
...++||||+++|+|.+++....... .....+++..++.++.|++.||+|||+. +|+||||||
T Consensus 148 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 148 -----GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp -----SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred -----CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 56899999999999999998754210 1123589999999999999999999999 999999999
Q ss_pred CceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhh
Q 002883 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMF 778 (871)
Q Consensus 700 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~ 778 (871)
+||+++.++.+||+|||+|+....... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||....
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~ 298 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCT-TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ceEEEcCCCcEEEcccCcccccccccc-cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999987654321 122333457889999999999999999999999999999999 999997543
Q ss_pred hhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 779 EEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
... .............. ..+..++.+++.+||+.||++|||+.|+++.
T Consensus 299 ~~~--~~~~~~~~~~~~~~------------------------------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 299 VEE--LFKLLKEGHRMDKP------------------------------SNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp HHH--HHHHHHTTCCCCCC------------------------------SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHH--HHHHHHcCCCCCCC------------------------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 221 11111111000000 0123457789999999999999999999999
Q ss_pred HHHHHHHH
Q 002883 859 LQEAQKMR 866 (871)
Q Consensus 859 L~~i~~~~ 866 (871)
|+++.+..
T Consensus 347 L~~~~~~~ 354 (382)
T 3tt0_A 347 LDRIVALT 354 (382)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHH
Confidence 99987654
No 140
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.8e-40 Score=346.00 Aligned_cols=248 Identities=23% Similarity=0.333 Sum_probs=181.3
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+. .
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 86 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK-----D 86 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC-----C
Confidence 368999999999999999999999899999999986432 23356788999999999999999999998765 5
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..++||||+ ++++.+++.... .+++.+++.++.|++.|+.|||+. +|+||||||+||+++.++.+||+|
T Consensus 87 ~~~lv~e~~-~~~l~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~D 155 (275)
T 2eue_A 87 EIIMVIEYA-GNELFDYIVQRD-------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIAD 155 (275)
T ss_dssp CEEEEEECC-CEEHHHHHHTSS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECC
T ss_pred eEEEEehhc-CCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEee
Confidence 689999999 778888887643 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
||.+....... ......||+.|+|||.+.+..+ ++++||||+||++|+|++|+.||........ .........+
T Consensus 156 fg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~ 230 (275)
T 2eue_A 156 FGLSNIMTDGN----FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-FKNISNGVYT 230 (275)
T ss_dssp SSCC-------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCC
T ss_pred cccceeccCcc----cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCC
Confidence 99998665332 1233468999999999887765 7899999999999999999999975432211 1111110000
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
. + ......+.+++.+||+.||++|||++|+++.
T Consensus 231 --~-----------------------~-------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 --L-----------------------P-------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp --C-----------------------C-------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --C-----------------------C-------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 0 0 0122356789999999999999999999763
No 141
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=7.5e-40 Score=345.96 Aligned_cols=249 Identities=22% Similarity=0.336 Sum_probs=201.8
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
+.++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+++++.++||||+++++++.+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----- 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC-----
Confidence 3568999999999999999999999999999999985432 22346788999999999999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 151 (279)
T 3fdn_A 82 TRVYLILEYAPLGTVYRELQKLS-------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 151 (279)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEEC
T ss_pred CEEEEEEecCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEE
Confidence 66899999999999999997654 589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||.+...... ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||........ ..........
T Consensus 152 Dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~ 225 (279)
T 3fdn_A 152 DFGWSVHAPSS-----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRISRVEFT 225 (279)
T ss_dssp SCCEESCC-------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCCC
T ss_pred eccccccCCcc-----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH-HHHHHhCCCC
Confidence 99998654322 22335689999999999988999999999999999999999999975322211 1111110000
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
... .....+.+++.+||+.||++|||++|+++.
T Consensus 226 --~~~------------------------------~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 226 --FPD------------------------------FVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --CCT------------------------------TSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --CCC------------------------------cCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 122356789999999999999999999975
No 142
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9.5e-40 Score=368.40 Aligned_cols=255 Identities=26% Similarity=0.369 Sum_probs=206.7
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
..++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++... ....
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~ 262 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGL 262 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECT----TSCE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcC----CCce
Confidence 3467899999999999999999985 7799999997543 457899999999999999999999997654 1357
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
|+||||+++|+|.+++...... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 334 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGRS-----VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFG 334 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCcHHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCC
Confidence 9999999999999999875422 478999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
+++..... .....++..|+|||.+.+..++.++|||||||++|||++ |+.||........ ...........
T Consensus 335 ~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~~~i~~~~~~~ 406 (450)
T 1k9a_A 335 LTKEASST------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRVEKGYKMD 406 (450)
T ss_dssp TCEECC------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH--HHHHHTTCCCC
T ss_pred Cccccccc------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcCCCCC
Confidence 99864321 112357889999999999999999999999999999998 9999986432211 11111110000
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
.. ..++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 407 ~p------------------------------~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 407 AP------------------------------DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CC------------------------------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 00 12334677999999999999999999999999998754
No 143
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=348.59 Aligned_cols=257 Identities=25% Similarity=0.397 Sum_probs=198.9
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||+||+|++. ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 75 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN-------PVC 75 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT-------TTE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------CcE
Confidence 457899999999999999999985 788999998643 345788999999999999999999998763 268
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc-eEEeecc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV-AHVGDFG 716 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-~kl~Dfg 716 (871)
+||||+++|+|.+++..... .+.+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||
T Consensus 76 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg 151 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEP----LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 151 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSS----EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCC
T ss_pred EEEEcCCCCCHHHHHhccCC----CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccc
Confidence 99999999999999976542 124789999999999999999999932229999999999999988886 7999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQV 796 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 796 (871)
.+...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......................
T Consensus 152 ~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (307)
T 2eva_A 152 TACDIQTH------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL 225 (307)
T ss_dssp C------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCC
T ss_pred cccccccc------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCc
Confidence 99765422 223458999999999998899999999999999999999999997532221111111111100000
Q ss_pred hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
. ..++..+.+++.+||+.||++|||++|+++.|+.+.+.
T Consensus 226 ~------------------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 226 I------------------------------KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp B------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred c------------------------------cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 0 01234567899999999999999999999999988654
No 144
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.4e-39 Score=344.14 Aligned_cols=252 Identities=25% Similarity=0.366 Sum_probs=202.9
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
..|++.+.||+|+||+||+|.+..++..||+|++.... ....+.+.+|+.+++.++||||+++++++... ..+....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCceE
Confidence 45888899999999999999999999999999996443 33456789999999999999999999988654 3334678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCceeeC-CCCceEEe
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS--IVHCDLKPSNVLLD-NEMVAHVG 713 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~-~~~~~kl~ 713 (871)
++||||+++++|.+++.... .+++..++.++.|++.||.|||+. + |+||||||+||+++ .++.+||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~ 174 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK-------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIG 174 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEEC
T ss_pred EEEEEecCCCCHHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEe
Confidence 99999999999999997643 589999999999999999999998 7 99999999999997 78999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||.+...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||..................+
T Consensus 175 Dfg~~~~~~~~-----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 248 (290)
T 1t4h_A 175 DLGLATLKRAS-----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP 248 (290)
T ss_dssp CTTGGGGCCTT-----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC
T ss_pred eCCCccccccc-----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc
Confidence 99999754322 223356899999999876 569999999999999999999999997543322222222111111
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
..... ....++.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~------------------------------~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 ASFDK------------------------------VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGGGG------------------------------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccCC------------------------------CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11111 11235678999999999999999999986
No 145
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.2e-39 Score=350.04 Aligned_cols=265 Identities=21% Similarity=0.295 Sum_probs=201.5
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+++++.++||||+++++++... .
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~ 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED-----N 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----T
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-----C
Confidence 45799999999999999999999889999999999643 233456788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..++||||+++++|.+++...... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~D 179 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHFKKQ---KRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGD 179 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred cEEEEEecCCCCCHHHHHHHhccc---ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEe
Confidence 789999999999999999754321 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh-CCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM-GLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~-~~~ 793 (871)
||.+....... .......|++.|+|||.+.+..++.++||||||+++|+|++|+.||................ ..+
T Consensus 180 fg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 256 (310)
T 2wqm_A 180 LGLGRFFSSKT---TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP 256 (310)
T ss_dssp C---------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC
T ss_pred ccceeeecCCC---ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC
Confidence 99998764321 12233468999999999988899999999999999999999999997532221111111111 111
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
.... ..+...+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 257 ~~~~------------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 257 PLPS------------------------------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp CCCT------------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCcc------------------------------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 0000 012345778999999999999999999999999997764
No 146
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-40 Score=358.17 Aligned_cols=271 Identities=24% Similarity=0.339 Sum_probs=209.3
Q ss_pred HhhcCCCCCceeeccccceEEEEEE-----CCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCccceeeeeeccc
Q 002883 556 KATEGFSSANLIGIGGYGYVYKGIL-----GTEETNVAVKVLDLQQ-RGASKSFIAECEALRSI-RHRNLVKIITSCSSI 628 (871)
Q Consensus 556 ~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 628 (871)
...++|++.+.||+|+||.||+|++ ..+++.||+|++.... ....+.+.+|+.+++++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3457899999999999999999997 3356789999996432 23456789999999999 899999999998765
Q ss_pred CcCCCceeeEEEeccCCCCHHHHhhcccccc----------------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 002883 629 DTRGNEFKALVYEFMPNGSLENWLNQKEDEQ----------------NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSI 692 (871)
Q Consensus 629 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 692 (871)
...++||||+++|+|.+++....... .....+++..++.++.||+.||+|||+. +|
T Consensus 122 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 193 (344)
T 1rjb_A 122 -----GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SC 193 (344)
T ss_dssp -----SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred -----CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 56899999999999999997654210 0112479999999999999999999999 99
Q ss_pred EecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CC
Q 002883 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GK 771 (871)
Q Consensus 693 vH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~ 771 (871)
+||||||+||+++.++.+||+|||.+....... .........+|+.|+|||.+.+..++.++|||||||++|+|+| |.
T Consensus 194 vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 272 (344)
T 1rjb_A 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDS-NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 272 (344)
T ss_dssp EETTCSGGGEEEETTTEEEECCCGGGSCGGGCT-TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred ccCCCChhhEEEcCCCcEEeCCCccCcccccCc-cceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999998765432 2222334567889999999888899999999999999999998 99
Q ss_pred CCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCC
Q 002883 772 RPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMK 851 (871)
Q Consensus 772 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 851 (871)
.||........ ............... .....+.+++.+||+.||++|||
T Consensus 273 ~p~~~~~~~~~-~~~~~~~~~~~~~~~------------------------------~~~~~l~~li~~~l~~dp~~Rps 321 (344)
T 1rjb_A 273 NPYPGIPVDAN-FYKLIQNGFKMDQPF------------------------------YATEEIYIIMQSCWAFDSRKRPS 321 (344)
T ss_dssp CSSTTCCCSHH-HHHHHHTTCCCCCCT------------------------------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCcccCCcHHH-HHHHHhcCCCCCCCC------------------------------CCCHHHHHHHHHHcCCCchhCcC
Confidence 99976432211 111111111100000 12345778999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 002883 852 IQDAIMELQEAQKMR 866 (871)
Q Consensus 852 a~evl~~L~~i~~~~ 866 (871)
+.|+++.|+.+.+..
T Consensus 322 ~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 322 FPNLTSFLGCQLADA 336 (344)
T ss_dssp HHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999886543
No 147
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-40 Score=359.29 Aligned_cols=268 Identities=25% Similarity=0.372 Sum_probs=210.1
Q ss_pred hhcCCCCCceeeccccceEEEEEEC-----CCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILG-----TEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDT 630 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 630 (871)
..++|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|++++++++||||+++++++.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 122 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG-- 122 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS--
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC--
Confidence 4578999999999999999999996 345889999997543 33456789999999999999999999998764
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccc-----------------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQ-----------------NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIV 693 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 693 (871)
...|+||||+++|+|.+++....... .....+++.+++.++.||+.||.|||+. +|+
T Consensus 123 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~iv 196 (343)
T 1luf_A 123 ---KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFV 196 (343)
T ss_dssp ---SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred ---CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 56899999999999999998743210 0113689999999999999999999999 999
Q ss_pred ecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCC
Q 002883 694 HCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKR 772 (871)
Q Consensus 694 H~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~ 772 (871)
||||||+||+++.++.+||+|||.+....... .........+|+.|+|||++.+..++.++|||||||++|+|++ |+.
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 275 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSAD-YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGG-CBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCc-cccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999998664322 1122233467899999999888899999999999999999999 999
Q ss_pred CCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCH
Q 002883 773 PTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKI 852 (871)
Q Consensus 773 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta 852 (871)
||......... ........+ ... ..++..+.+++.+||+.||++|||+
T Consensus 276 p~~~~~~~~~~-~~~~~~~~~-~~~------------------------------~~~~~~l~~li~~~l~~~p~~Rps~ 323 (343)
T 1luf_A 276 PYYGMAHEEVI-YYVRDGNIL-ACP------------------------------ENCPLELYNLMRLCWSKLPADRPSF 323 (343)
T ss_dssp TTTTSCHHHHH-HHHHTTCCC-CCC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred cCCCCChHHHH-HHHhCCCcC-CCC------------------------------CCCCHHHHHHHHHHcccCcccCCCH
Confidence 99754332211 111111000 000 0123457789999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 002883 853 QDAIMELQEAQKM 865 (871)
Q Consensus 853 ~evl~~L~~i~~~ 865 (871)
.|+++.|+++.+.
T Consensus 324 ~~~~~~L~~~~~~ 336 (343)
T 1luf_A 324 CSIHRILQRMCER 336 (343)
T ss_dssp HHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHhh
Confidence 9999999987543
No 148
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1e-39 Score=348.32 Aligned_cols=267 Identities=18% Similarity=0.265 Sum_probs=206.7
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
..++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+++++.++|++++..+.++... ....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~----~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAE----GDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEE----TTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCC----CCce
Confidence 35789999999999999999999988999999998754332 24578899999999998888887776442 2567
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee---CCCCceEEe
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVG 713 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~ 713 (871)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~ 150 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSR------KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYII 150 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEEC
T ss_pred EEEEEcc-CCCHHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEe
Confidence 9999999 9999999975432 589999999999999999999999 99999999999999 788999999
Q ss_pred ecccceecCCCCCCc----cccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhh--hHHHH
Q 002883 714 DFGLSRLLHDNSPDQ----TSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGL--SLHKY 787 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~--~~~~~ 787 (871)
|||.+.......... .......||+.|+|||.+.+..++.++|||||||++|+|++|+.||........ .....
T Consensus 151 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 230 (296)
T 4hgt_A 151 DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 230 (296)
T ss_dssp CCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH
T ss_pred cCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhh
Confidence 999999876543211 122345789999999999999999999999999999999999999975322110 00000
Q ss_pred hhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 788 AKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
... .. ..........++.++.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 231 ~~~------------~~---------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 231 SEK------------KM---------------STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHH------------HH---------------HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hcc------------cc---------------cchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 000 00 00000001123457889999999999999999999999999987654
No 149
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=352.57 Aligned_cols=281 Identities=23% Similarity=0.340 Sum_probs=214.5
Q ss_pred hcCCCCCceeeccccceEEEEEE----CCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGIL----GTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
.++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC---C
Confidence 45799999999999999999994 5578999999997666666678999999999999999999999876542 2
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~ 187 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIG 187 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTT------SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEEC
T ss_pred CceEEEEECCCCCCHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEe
Confidence 467999999999999999976532 489999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||.+.................++..|+|||.+.+..++.++||||||+++|+|+||..||........ ........
T Consensus 188 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~---~~~~~~~~ 264 (326)
T 2w1i_A 188 DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM---RMIGNDKQ 264 (326)
T ss_dssp CCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH---HHHCTTCC
T ss_pred cCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH---Hhhccccc
Confidence 999998875443222222334577889999998888899999999999999999999999875322211 00000000
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
.. ........... ...... ....++.++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 265 ~~-------~~~~~~~~~~~---~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 265 GQ-------MIVFHLIELLK---NNGRLP---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp TH-------HHHHHHHHHHH---TTCCCC---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hh-------hhHHHHHHHhh---cCCCCC---CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 00 00000000000 000000 01123456889999999999999999999999999997754
No 150
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.2e-40 Score=350.14 Aligned_cols=263 Identities=24% Similarity=0.341 Sum_probs=207.9
Q ss_pred hhcCCCCCc-eeeccccceEEEEEE--CCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcC
Q 002883 557 ATEGFSSAN-LIGIGGYGYVYKGIL--GTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 557 ~~~~y~~~~-~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 631 (871)
..++|++.+ .||+|+||+||+|.+ ..+++.||||+++... ....+.+.+|+++++.++||||+++++++..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 89 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---- 89 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES----
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC----
Confidence 346788888 999999999999954 5567899999996443 2235678999999999999999999999832
Q ss_pred CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 002883 632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711 (871)
Q Consensus 632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 711 (871)
...++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 90 --~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~k 157 (291)
T 1xbb_A 90 --ESWMLVMEMAELGPLNKYLQQNR-------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAK 157 (291)
T ss_dssp --SSEEEEEECCTTEEHHHHHHHCT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred --CCcEEEEEeCCCCCHHHHHHhCc-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEE
Confidence 45789999999999999997643 589999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhh
Q 002883 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKM 790 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~ 790 (871)
|+|||.+.................+++.|+|||.+.+..++.++||||||+++|+|++ |+.||........ ......
T Consensus 158 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~~~ 235 (291)
T 1xbb_A 158 ISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--TAMLEK 235 (291)
T ss_dssp ECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHHHT
T ss_pred EccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH--HHHHHc
Confidence 9999999877544322222233446789999999888889999999999999999999 9999986433211 111111
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQ 867 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~~ 867 (871)
....... ..++..+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 236 ~~~~~~~------------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 236 GERMGCP------------------------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp TCCCCCC------------------------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCC------------------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 1000000 0223457799999999999999999999999999876553
No 151
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=368.15 Aligned_cols=350 Identities=19% Similarity=0.166 Sum_probs=284.2
Q ss_pred eeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCCccccc
Q 002883 114 YFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLD 193 (871)
Q Consensus 114 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 193 (871)
.++.+++.+. .+|..+. ++++.|+|++|.|++. .|+.|.++++|++|+|++|.++.+.+ .
T Consensus 15 ~v~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~----------~~~~~~~l~~L~~L~L~~n~i~~~~~------~ 74 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTL----------NQDEFASFPHLEELELNENIVSAVEP------G 74 (477)
T ss_dssp EEECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEE----------CTTTTTTCTTCCEEECTTSCCCEECT------T
T ss_pred EEEeCCCCcC-cCCCCCC---CCCcEEECCCCccceE----------CHhHccCCCCCCEEECCCCccCEeCh------h
Confidence 3444444443 4554432 4667777777777621 23446677777777777777766432 4
Q ss_pred cccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCC
Q 002883 194 SLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLK 273 (871)
Q Consensus 194 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 273 (871)
.+.++++|++|+|++|+++...+..+..+ ++|++|+|++|+++...+..|.++++|+.|++++|.+++..+..|..+++
T Consensus 75 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 153 (477)
T 2id5_A 75 AFNNLFNLRTLGLRSNRLKLIPLGVFTGL-SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 153 (477)
T ss_dssp TTTTCTTCCEEECCSSCCCSCCTTSSTTC-TTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTT
T ss_pred hhhCCccCCEEECCCCcCCccCcccccCC-CCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCC
Confidence 56677788888888888874433344454 56888888888888888888899999999999999998888888999999
Q ss_pred CcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccC
Q 002883 274 LQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSR 353 (871)
Q Consensus 274 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 353 (871)
|++|+|++|++++..+..|..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.++.......+|+.|++++
T Consensus 154 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 233 (477)
T 2id5_A 154 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH 233 (477)
T ss_dssp CCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEES
T ss_pred CCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcC
Confidence 99999999999876667788999999999999999988888899999999999999888777777777777999999999
Q ss_pred CCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 354 NHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIP 433 (871)
Q Consensus 354 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 433 (871)
|.++...+..+..+++|+.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+
T Consensus 234 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 313 (477)
T 2id5_A 234 CNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEE 313 (477)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCG
T ss_pred CcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCH
Confidence 99996555788999999999999999998888889999999999999999999999999999999999999999998888
Q ss_pred ccccccccccEEecCCCcCcccCCCCcccccccceeccCCCCCccCCCccc
Q 002883 434 MFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGGSPELH 484 (871)
Q Consensus 434 ~~~~~~~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~~~~~~ 484 (871)
..|..+++|++|+|++|+|.|.++..+.+.....+.+.++...|..|..+.
T Consensus 314 ~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~~~ 364 (477)
T 2id5_A 314 SVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQ 364 (477)
T ss_dssp GGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESGGGT
T ss_pred hHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCchHHc
Confidence 889999999999999999999887655555555677788889999887653
No 152
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=355.20 Aligned_cols=261 Identities=23% Similarity=0.374 Sum_probs=201.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEE----EEEEeecc-ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNV----AVKVLDLQ-QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v----avK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
.++|++.+.||+|+||+||+|++..+++.| |+|.+... .....+.+.+|+.++++++||||+++++++...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 89 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC----
Confidence 467999999999999999999998777655 66666432 334567889999999999999999999998653
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
..++|+||+.+|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 90 --~~~~v~~~~~~g~L~~~l~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL 158 (327)
T 3lzb_A 90 --TVQLITQLMPFGCLLDYVREHKD------NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKI 158 (327)
T ss_dssp --SEEEEECCCSSCBHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEE
T ss_pred --CceEEEEecCCCcHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEE
Confidence 36899999999999999977542 589999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~ 791 (871)
+|||+++........ .......+|+.|+|||.+.+..++.++|||||||++|+|++ |+.||........ .......
T Consensus 159 ~DfG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~~~~~ 235 (327)
T 3lzb_A 159 TDFGLAKLLGAEEKE-YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--SSILEKG 235 (327)
T ss_dssp CCTTC-----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHHTT
T ss_pred ccCcceeEccCcccc-ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHcC
Confidence 999999876543221 22223456889999999999999999999999999999999 9999976433221 1111111
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
...... ..+...+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 236 ~~~~~~------------------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 236 ERLPQP------------------------------PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp CCCCCC------------------------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred CCCCCC------------------------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 100000 012235678999999999999999999999999987544
No 153
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.3e-40 Score=376.33 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=209.8
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
..+|++.+.||+|+||.||+|++..++..||||+++.... ..+.+.+|++++++++||||+++++++... ...|
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SSCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecC-----CcEE
Confidence 4568899999999999999999988899999999975433 457899999999999999999999998765 5689
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL 717 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 717 (871)
+||||+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 293 lv~E~~~~g~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 364 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNR-----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGL 364 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCT-----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred EEEEccCCCCHHHHHHhcCc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeeccc
Confidence 99999999999999986542 2589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883 718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQV 796 (871)
Q Consensus 718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 796 (871)
++...... ........++..|+|||++.+..++.++|||||||++|||++ |+.||....... .............
T Consensus 365 a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~~~~ 440 (495)
T 1opk_A 365 SRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKDYRMER 440 (495)
T ss_dssp EECCTTCC--EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTTCCCCC
T ss_pred ceeccCCc--eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCCCC
Confidence 98764321 122223446789999999988899999999999999999999 999997543221 1111111100000
Q ss_pred hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHH
Q 002883 797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEA 862 (871)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i 862 (871)
...++..+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 441 ------------------------------~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 441 ------------------------------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp ------------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ------------------------------CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 012234677899999999999999999999999865
No 154
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-39 Score=356.16 Aligned_cols=267 Identities=19% Similarity=0.259 Sum_probs=203.4
Q ss_pred HHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc-----ccchHHHHHHHHHHHHcCCCCccceeeeeecccC
Q 002883 555 LKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ-----QRGASKSFIAECEALRSIRHRNLVKIITSCSSID 629 (871)
Q Consensus 555 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 629 (871)
....++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~- 100 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE- 100 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC-
Confidence 34567899999999999999999999999999999998643 234457889999999999999999999998765
Q ss_pred cCCCceeeEEEeccCCCCHHHHhhcccccc---------------------------------cccCCCCHHHHHHHHHH
Q 002883 630 TRGNEFKALVYEFMPNGSLENWLNQKEDEQ---------------------------------NQRPKLNLMQRLSIAID 676 (871)
Q Consensus 630 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~---------------------------------~~~~~l~~~~~~~i~~~ 676 (871)
...++||||+++|+|.+++....... .....+++..++.++.|
T Consensus 101 ----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q 176 (345)
T 3hko_A 101 ----QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQ 176 (345)
T ss_dssp ----SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHH
T ss_pred ----CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHH
Confidence 67899999999999999996321110 00112467788999999
Q ss_pred HHHHHHHHhhcCCCCeEecCCCCCceeeCCCC--ceEEeecccceecCCCCC-CccccccccccccccCcccccC--CCC
Q 002883 677 VANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM--VAHVGDFGLSRLLHDNSP-DQTSTSRVKGSIGYVAPEYGAL--GEV 751 (871)
Q Consensus 677 i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~--~~~ 751 (871)
++.||+|||+. +|+||||||+||+++.++ .+||+|||.+........ .........||+.|+|||++.+ ..+
T Consensus 177 i~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 253 (345)
T 3hko_A 177 IFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESY 253 (345)
T ss_dssp HHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCC
T ss_pred HHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCC
Confidence 99999999999 999999999999998776 899999999987643221 1112334569999999998764 678
Q ss_pred CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHH
Q 002883 752 STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQ 831 (871)
Q Consensus 752 ~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (871)
+.++|||||||++|+|++|+.||......... ........... .+......
T Consensus 254 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~----------------------------~~~~~~~~ 304 (345)
T 3hko_A 254 GPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI-SQVLNKKLCFE----------------------------NPNYNVLS 304 (345)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHCCCCTT----------------------------SGGGGGSC
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCChHHHH-HHHHhcccccC----------------------------CcccccCC
Confidence 99999999999999999999999754333211 11111111000 00111233
Q ss_pred HHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 832 VSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 832 ~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
..+.+++.+||+.||++|||+.|+++.
T Consensus 305 ~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 305 PLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 467799999999999999999999873
No 155
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=358.18 Aligned_cols=268 Identities=20% Similarity=0.252 Sum_probs=202.6
Q ss_pred hcCCCCCceeeccccceEEEEEECC---CCcEEEEEEeeccccc-----------hHHHHHHHHHHHHcCCCCccceeee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGT---EETNVAVKVLDLQQRG-----------ASKSFIAECEALRSIRHRNLVKIIT 623 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~ 623 (871)
.++|++.+.||+|+||.||+|++.. ++..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3579999999999999999999986 7889999998654321 1134667888999999999999999
Q ss_pred eecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCcee
Q 002883 624 SCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703 (871)
Q Consensus 624 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nil 703 (871)
++... ..+....|+||||+ +++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+
T Consensus 116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 183 (345)
T 2v62_A 116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQNG-------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLL 183 (345)
T ss_dssp EEEEE-SSSCEEEEEEEECE-EEEHHHHCBGGG-------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred ccccc-cCCCcEEEEEEecc-CCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEE
Confidence 98763 23347789999999 999999998654 589999999999999999999999 9999999999999
Q ss_pred eCCCC--ceEEeecccceecCCCCCC----ccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchh
Q 002883 704 LDNEM--VAHVGDFGLSRLLHDNSPD----QTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM 777 (871)
Q Consensus 704 l~~~~--~~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 777 (871)
++.++ .+||+|||+|+.+...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 184 l~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 263 (345)
T 2v62_A 184 LGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQN 263 (345)
T ss_dssp EESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGG
T ss_pred EccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 98877 9999999999876532211 11223457999999999999889999999999999999999999999753
Q ss_pred hhhhhhHHHHh---hhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHH
Q 002883 778 FEEGLSLHKYA---KMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQD 854 (871)
Q Consensus 778 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~e 854 (871)
........... ....+........ ...++.++.+++.+||+.||++|||++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ 318 (345)
T 2v62_A 264 LKDPVAVQTAKTNLLDELPQSVLKWAP-------------------------SGSSCCEIAQFLVCAHSLAYDEKPNYQA 318 (345)
T ss_dssp TTCHHHHHHHHHHHHHTTTHHHHHHSC-------------------------TTSCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred ccccHHHHHHHHhhcccccHHHHhhcc-------------------------ccccHHHHHHHHHHHhhcCcccCCCHHH
Confidence 22211111111 1111111110000 0023456889999999999999999999
Q ss_pred HHHHHHHH
Q 002883 855 AIMELQEA 862 (871)
Q Consensus 855 vl~~L~~i 862 (871)
+++.|+++
T Consensus 319 l~~~L~~~ 326 (345)
T 2v62_A 319 LKKILNPH 326 (345)
T ss_dssp HHHHHCTT
T ss_pred HHHHHhcc
Confidence 99999864
No 156
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9.2e-40 Score=352.09 Aligned_cols=271 Identities=21% Similarity=0.275 Sum_probs=200.6
Q ss_pred hcCCCCC-ceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSA-NLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++. +.||+|+||+||+|++..+++.||||++........+.+.+|++++.++ +||||+++++++.+. ..
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~-----~~ 85 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEE-----DR 85 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC-----CE
Confidence 3578885 7899999999999999989999999999766555677899999999985 799999999998765 67
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc---eEE
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV---AHV 712 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl 712 (871)
.|+||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl 155 (316)
T 2ac3_A 86 FYLVFEKMRGGSILSHIHKRR-------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKI 155 (316)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEE
T ss_pred EEEEEEcCCCCcHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEE
Confidence 899999999999999997653 589999999999999999999999 9999999999999988776 999
Q ss_pred eecccceecCCCCCC----ccccccccccccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhh
Q 002883 713 GDFGLSRLLHDNSPD----QTSTSRVKGSIGYVAPEYGAL-----GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLS 783 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~ 783 (871)
+|||++......... ........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+..
T Consensus 156 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 235 (316)
T 2ac3_A 156 CDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235 (316)
T ss_dssp CCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC
T ss_pred EEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc
Confidence 999999765432111 111223459999999998764 56889999999999999999999999754322110
Q ss_pred HHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 784 LHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
+.. . + ..+........ ................+...+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~---~-------~-~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 236 WDR---G-------E-ACPACQNMLFE---SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp C---------------CCHHHHHHHHH---HHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccc---c-------c-cchhHHHHHHH---HHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 000 0 0 00000000000 00000000111112234567889999999999999999999987
No 157
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.1e-40 Score=356.40 Aligned_cols=280 Identities=23% Similarity=0.315 Sum_probs=198.2
Q ss_pred HHHHHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHHHHcCCCCccceeeeeecccC
Q 002883 552 AELLKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--GASKSFIAECEALRSIRHRNLVKIITSCSSID 629 (871)
Q Consensus 552 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 629 (871)
.......++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 105 (329)
T 3gbz_A 27 APSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN- 105 (329)
T ss_dssp -----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET-
T ss_pred CCcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC-
Confidence 3344566899999999999999999999999999999999964432 2245678999999999999999999998765
Q ss_pred cCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee-----
Q 002883 630 TRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL----- 704 (871)
Q Consensus 630 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----- 704 (871)
...++||||++ |+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||++
T Consensus 106 ----~~~~lv~e~~~-~~L~~~~~~~~-------~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~ 170 (329)
T 3gbz_A 106 ----HRLHLIFEYAE-NDLKKYMDKNP-------DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDA 170 (329)
T ss_dssp ----TEEEEEEECCS-EEHHHHHHHCT-------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC---
T ss_pred ----CEEEEEEecCC-CCHHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCC
Confidence 67899999997 59999997654 589999999999999999999999 99999999999999
Q ss_pred CCCCceEEeecccceecCCCCCCccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhh
Q 002883 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLS 783 (871)
Q Consensus 705 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~ 783 (871)
+.++.+||+|||.+....... .......||+.|+|||++.+. .++.++||||+||++|+|++|+.||.........
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 247 (329)
T 3gbz_A 171 SETPVLKIGDFGLARAFGIPI---RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL 247 (329)
T ss_dssp --CCEEEECCTTHHHHHC--------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred CccceEEECcCCCccccCCcc---cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHH
Confidence 455569999999998764321 222334689999999988764 5899999999999999999999999765443322
Q ss_pred HHHHhhhCCCchh--hhhc-ChhHHHHHHHHHhhhhhhcCchhHHhH-HHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 784 LHKYAKMGLPDQV--AEII-DPAILEEALEIQAGIVKELQPNLRAKF-HEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 784 ~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.........+... .... .+.+... ............. .....++.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 248 FKIFEVLGLPDDTTWPGVTALPDWKQS-------FPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHCCCCTTTSTTGGGSTTCCTT-------CCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHhCCCchhhhhhhhhhhhhhhh-------hhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 2222222222110 0000 0000000 0000000000111 113456789999999999999999999986
No 158
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.2e-40 Score=353.48 Aligned_cols=281 Identities=21% Similarity=0.321 Sum_probs=218.9
Q ss_pred cccCHHHHHHhhcCCCCCceeeccccceEEEEEE-----CCCCcEEEEEEeecccc-chHHHHHHHHHHHHcC-CCCccc
Q 002883 547 LKISYAELLKATEGFSSANLIGIGGYGYVYKGIL-----GTEETNVAVKVLDLQQR-GASKSFIAECEALRSI-RHRNLV 619 (871)
Q Consensus 547 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv 619 (871)
..+....+....++|++.+.||+|+||+||+|++ ..+++.||||+++.... ...+.+.+|+++++++ +||||+
T Consensus 15 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv 94 (316)
T 2xir_A 15 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94 (316)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred ccccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCee
Confidence 3455566666778999999999999999999985 34678999999965432 3346788999999999 799999
Q ss_pred eeeeeecccCcCCCceeeEEEeccCCCCHHHHhhccccccc---------ccCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 002883 620 KIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQN---------QRPKLNLMQRLSIAIDVANVLEYLHHHCHT 690 (871)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~ 690 (871)
++++++... +...++||||+++++|.+++........ ....+++..++.++.|++.||.|||+.
T Consensus 95 ~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--- 167 (316)
T 2xir_A 95 NLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--- 167 (316)
T ss_dssp CEEEEECCT----TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---
T ss_pred eEEEEEecC----CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---
Confidence 999998653 2457999999999999999987543110 011378999999999999999999999
Q ss_pred CeEecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-
Q 002883 691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT- 769 (871)
Q Consensus 691 ~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt- 769 (871)
+|+||||||+||+++.++.+||+|||.+....... .........||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 168 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~ 246 (316)
T 2xir_A 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246 (316)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CcccccCccceEEECCCCCEEECCCccccccccCc-cceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998765432 2222334567899999999988999999999999999999998
Q ss_pred CCCCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCC
Q 002883 770 GKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDR 849 (871)
Q Consensus 770 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 849 (871)
|+.||................ ....... .....+.+++.+||+.||++|
T Consensus 247 g~~p~~~~~~~~~~~~~~~~~-~~~~~~~------------------------------~~~~~l~~li~~~l~~dp~~R 295 (316)
T 2xir_A 247 GASPYPGVKIDEEFCRRLKEG-TRMRAPD------------------------------YTTPEMYQTMLDCWHGEPSQR 295 (316)
T ss_dssp SCCSSTTCCCSHHHHHHHHHT-CCCCCCT------------------------------TCCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCcccchhHHHHHHhccC-ccCCCCC------------------------------CCCHHHHHHHHHHcCCChhhC
Confidence 999997543222111111111 0000000 122356789999999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q 002883 850 MKIQDAIMELQEAQKMR 866 (871)
Q Consensus 850 Pta~evl~~L~~i~~~~ 866 (871)
||+.|+++.|+++.+..
T Consensus 296 ps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 296 PTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhh
Confidence 99999999999987654
No 159
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.1e-39 Score=342.07 Aligned_cols=257 Identities=20% Similarity=0.302 Sum_probs=205.4
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc------chHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR------GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 80 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK---- 80 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCC----
Confidence 569999999999999999999998999999999864321 1357889999999999999999999998765
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC----
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM---- 708 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---- 708 (871)
...++||||+++++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++
T Consensus 81 -~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~ 149 (283)
T 3bhy_A 81 -TDVVLILELVSGGELFDFLAEKE-------SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNP 149 (283)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSC
T ss_pred -CeEEEEEeecCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCC
Confidence 66899999999999999997643 589999999999999999999999 999999999999998877
Q ss_pred ceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHh
Q 002883 709 VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYA 788 (871)
Q Consensus 709 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~ 788 (871)
.+||+|||.+....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||........ .....
T Consensus 150 ~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~ 224 (283)
T 3bhy_A 150 RIKLIDFGIAHKIEAGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-LTNIS 224 (283)
T ss_dssp CEEECCCTTCEECC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHH
T ss_pred ceEEEecccceeccCCC----cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-HHHhH
Confidence 89999999998765432 22334689999999999888999999999999999999999999975432211 11111
Q ss_pred hhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH--HHHHHH
Q 002883 789 KMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM--ELQEAQ 863 (871)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~--~L~~i~ 863 (871)
...... . ..........+.+++.+||+.||++|||+.|+++ .++.+.
T Consensus 225 ~~~~~~------~----------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 225 AVNYDF------D----------------------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp TTCCCC------C----------------------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred hcccCC------c----------------------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 110000 0 0111123456789999999999999999999998 455553
No 160
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1e-39 Score=343.39 Aligned_cols=255 Identities=24% Similarity=0.365 Sum_probs=204.3
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||.||+|++. ++.||||++.... ....+.+.+|+.++++++||||+++++++.+.. ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP---APH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT---SSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC---CCC
Confidence 467999999999999999999995 8889999996543 334567899999999999999999999986542 256
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCceeeCCCCceEEe
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS--IVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
.++||||+++|+|.+++...... .+++..++.++.|++.||+|||+. + |+||||||+||+++.++.++++
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~ 155 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTNF-----VVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARIS 155 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSSC-----CCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEE
T ss_pred eEeeecccCCCcHHHHHhhcccC-----CCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEE
Confidence 79999999999999999875422 589999999999999999999998 8 9999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCC---ccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVST---HGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~ 790 (871)
|||++..... ....||+.|+|||.+.+..++. ++|||||||++|||++|+.||........... ....
T Consensus 156 ~~~~~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~ 226 (271)
T 3kmu_A 156 MADVKFSFQS--------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK-VALE 226 (271)
T ss_dssp GGGSCCTTSC--------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHH-HHHS
T ss_pred eccceeeecc--------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHH-HHhc
Confidence 9988754321 2245899999999987665544 79999999999999999999986433322111 1111
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK 864 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~ 864 (871)
........ .+...+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 227 ~~~~~~~~------------------------------~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 227 GLRPTIPP------------------------------GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCCCCCCT------------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCCCCC------------------------------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11111100 123457789999999999999999999999998753
No 161
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1e-39 Score=352.60 Aligned_cols=249 Identities=24% Similarity=0.295 Sum_probs=192.7
Q ss_pred hcCCCCCceeeccccceEEEEEEC---CCCcEEEEEEeeccc----cchHHHHHHHHHHHHcCCCCccceeeeeecccCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILG---TEETNVAVKVLDLQQ----RGASKSFIAECEALRSIRHRNLVKIITSCSSIDT 630 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 630 (871)
.++|++.+.||+|+||.||+|++. .+++.||+|+++... ......+.+|+++++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 93 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG-- 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS--
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC--
Confidence 468999999999999999999984 578999999996432 22345678899999999999999999998765
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCce
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA 710 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 710 (871)
...|+||||+++++|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+||+++.++.+
T Consensus 94 ---~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~ 160 (327)
T 3a62_A 94 ---GKLYLILEYLSGGELFMQLEREG-------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHV 160 (327)
T ss_dssp ---SCEEEEEECCTTEEHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCE
T ss_pred ---CEEEEEEeCCCCCcHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcE
Confidence 66899999999999999997643 589999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh
Q 002883 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790 (871)
Q Consensus 711 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~ 790 (871)
||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .......
T Consensus 161 kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~ 236 (327)
T 3a62_A 161 KLTDFGLCKESIHDG---TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-IDKILKC 236 (327)
T ss_dssp EECCCSCC-------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHT
T ss_pred EEEeCCcccccccCC---ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhC
Confidence 999999997643221 223345699999999999888999999999999999999999999975432211 1111111
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-----CHHHHHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-----KIQDAIM 857 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----ta~evl~ 857 (871)
... .++ .....+.+++.+||+.||++|| ++.|+++
T Consensus 237 ~~~-------------------------~p~-------~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 237 KLN-------------------------LPP-------YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CCC-------------------------CCT-------TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCC-------------------------CCC-------CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 000 000 1234567899999999999999 6777765
No 162
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.1e-40 Score=343.38 Aligned_cols=258 Identities=26% Similarity=0.430 Sum_probs=208.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ..+.+.+|++++++++||||+++++++.+. ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ-----APIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----SSCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccC-----CCeE
Confidence 467999999999999999999997 678899999975543 346789999999999999999999998765 5689
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL 717 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 717 (871)
+||||+++++|.+++..... .+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||.
T Consensus 80 lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~ 150 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRG------LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGM 150 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTG
T ss_pred EEEeCCCCCcHHHHHhhCcc------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccc
Confidence 99999999999999976532 589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883 718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQV 796 (871)
Q Consensus 718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 796 (871)
+....... ........++..|+|||+..+..++.++||||+|+++|+|++ |+.||........ ............
T Consensus 151 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~i~~~~~~~~ 226 (267)
T 3t9t_A 151 TRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--VEDISTGFRLYK 226 (267)
T ss_dssp GGGBCCHH--HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHHHTTCCCCC
T ss_pred cccccccc--ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH--HHHHhcCCcCCC
Confidence 98654321 111223456788999999888899999999999999999999 8999975322211 111111100000
Q ss_pred hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
.. .....+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 227 ~~------------------------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 227 PR------------------------------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CT------------------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred Cc------------------------------cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 00 1123567899999999999999999999999998763
No 163
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.3e-39 Score=350.22 Aligned_cols=273 Identities=22% Similarity=0.362 Sum_probs=201.6
Q ss_pred HhhcCCCCCceeeccccceEEEEEECC---CCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCc
Q 002883 556 KATEGFSSANLIGIGGYGYVYKGILGT---EETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDT 630 (871)
Q Consensus 556 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 630 (871)
...++|.+.+.||+|+||.||+|++.. +++.||+|+++... ....+.+.+|+.++++++||||+++++++.+...
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 345689999999999999999998754 45689999996443 3344678899999999999999999999877654
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCce
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA 710 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 710 (871)
.+....++||||+++++|.+++...... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLE-TGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBT-TSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhh-cCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 4445679999999999999999543211 1123689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhh
Q 002883 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAK 789 (871)
Q Consensus 711 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~ 789 (871)
||+|||.+........ ........+++.|+|||.+.+..++.++||||||+++|+|++ |..||........ .....
T Consensus 187 kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~~ 263 (313)
T 3brb_A 187 CVADFGLSKKIYSGDY-YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM--YDYLL 263 (313)
T ss_dssp EECSCSCC-----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHHHH
T ss_pred EEeecCcceecccccc-cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HHHHH
Confidence 9999999987654321 112233457889999999988999999999999999999999 8999975432211 11111
Q ss_pred hCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 790 MGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
........ ..+...+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 264 ~~~~~~~~------------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 264 HGHRLKQP------------------------------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp TTCCCCCB------------------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCC------------------------------ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11000000 02234577999999999999999999999999998764
No 164
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-39 Score=344.38 Aligned_cols=253 Identities=21% Similarity=0.290 Sum_probs=198.1
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+. ...+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~ 96 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY-----HNMY 96 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----SEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecC-----CeEE
Confidence 57999999999999999999999899999999996543 33457889999999999999999999998765 6689
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee---CCCCceEEee
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGD 714 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~D 714 (871)
+||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~D 170 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQAR---GKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIID 170 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEeCCCCcHHHHHHhhhhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEe
Confidence 999999999999998654321 23689999999999999999999999 99999999999999 4567899999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||.+....... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||............ ....+.
T Consensus 171 fg~a~~~~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~--~~~~~~ 243 (285)
T 3is5_A 171 FGLAELFKSDE----HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA--TYKEPN 243 (285)
T ss_dssp CCCCCC--------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHCCCC
T ss_pred eecceecCCcc----cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhh--ccCCcc
Confidence 99998664322 223456899999999865 57899999999999999999999999764332211111 100000
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.. .........+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~----------------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 244 YA----------------------------VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC----------------------------C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cc----------------------------cccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 000012345678999999999999999999985
No 165
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.4e-39 Score=350.66 Aligned_cols=278 Identities=22% Similarity=0.307 Sum_probs=211.1
Q ss_pred cCC-CCCceeeccccceEEEEEE----CCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 559 EGF-SSANLIGIGGYGYVYKGIL----GTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 559 ~~y-~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
++| ++.+.||+|+||+||+|.+ ..+++.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 106 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG--- 106 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC---
Confidence 345 8999999999999988764 4478899999997543 234567899999999999999999999987542
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
....++||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl 175 (318)
T 3lxp_A 107 AASLQLVMEYVPLGSLRDYLPRH--------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKI 175 (318)
T ss_dssp TTEEEEEECCCTTCBHHHHGGGS--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred CceEEEEEecccCCcHHHHHhhC--------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEE
Confidence 25689999999999999999754 389999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
+|||.+.................+|..|+|||++.+..++.++||||+||++|+|++|+.||............ .
T Consensus 176 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~-----~ 250 (318)
T 3lxp_A 176 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG-----I 250 (318)
T ss_dssp CCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHC-----S
T ss_pred CCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhc-----c
Confidence 99999998765432222334456888999999998888999999999999999999999999754332111110 0
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQ 867 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~~ 867 (871)
....... ..... ......... ....++..+.+++.+||+.||++|||+.|+++.|+++.+..+
T Consensus 251 ~~~~~~~------~~~~~---~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 251 AQGQMTV------LRLTE---LLERGERLP---RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp CCHHHHH------HHHHH---HHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cccchhH------HHHHH---HHhcccCCC---CCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 0000000 00000 000000000 011234568899999999999999999999999999877654
No 166
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=356.74 Aligned_cols=276 Identities=22% Similarity=0.283 Sum_probs=200.0
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRG-ASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
++|++.+.||+|+||+||+|++..+++.||+|++...... ....+.+|+++++.++||||+++++++... ...+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE-----KSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECS-----SCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeC-----CEEE
Confidence 5799999999999999999999989999999998643321 112445799999999999999999998765 6689
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL 717 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 717 (871)
+||||++ |+|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 77 lv~e~~~-~~l~~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 146 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDCGN------IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGL 146 (324)
T ss_dssp EEEECCS-EEHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSE
T ss_pred EEecccc-cCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcc
Confidence 9999996 599999876542 589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc--
Q 002883 718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD-- 794 (871)
Q Consensus 718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~-- 794 (871)
+....... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..................+.
T Consensus 147 a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 223 (324)
T 3mtl_A 147 ARAKSIPT---KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEE 223 (324)
T ss_dssp EECC---------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred cccccCCc---cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChH
Confidence 98654321 22233468999999998765 5689999999999999999999999986544332222222112111
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.......... ... .................+...+.+++.+||+.||++|||++|+++
T Consensus 224 ~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 224 TWPGILSNEE---FKT--YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp TSTTGGGCHH---HHH--TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hchhhhcchh---hcc--cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 1111111100 000 000000011111222234567789999999999999999999986
No 167
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.5e-40 Score=361.82 Aligned_cols=262 Identities=19% Similarity=0.232 Sum_probs=205.7
Q ss_pred HHHHHHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecc
Q 002883 551 YAELLKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSS 627 (871)
Q Consensus 551 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 627 (871)
..+.....++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|.+++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444456688999999999999999999999999999999996432 2233457889999999999999999999876
Q ss_pred cCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC
Q 002883 628 IDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE 707 (871)
Q Consensus 628 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 707 (871)
. ...|+||||+++|+|.+++...+. .+++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 133 ~-----~~~~lVmE~~~gg~L~~~l~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~ 198 (412)
T 2vd5_A 133 E-----NYLYLVMEYYVGGDLLTLLSKFGE------RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRC 198 (412)
T ss_dssp S-----SEEEEEECCCCSCBHHHHHHHHSS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred C-----CEEEEEEcCCCCCcHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCC
Confidence 5 678999999999999999976432 589999999999999999999999 99999999999999999
Q ss_pred CceEEeecccceecCCCCCCccccccccccccccCccccc-------CCCCCCccchhhHHHHHHHHHhCCCCCchhhhh
Q 002883 708 MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA-------LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEE 780 (871)
Q Consensus 708 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 780 (871)
+.+||+|||+|+...... .......+||+.|+|||++. ...++.++|||||||++|||++|+.||......
T Consensus 199 g~vkL~DFGla~~~~~~~--~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~ 276 (412)
T 2vd5_A 199 GHIRLADFGSCLKLRADG--TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA 276 (412)
T ss_dssp SCEEECCCTTCEECCTTS--CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred CCEEEeechhheeccCCC--ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH
Confidence 999999999998765432 11223457999999999876 457899999999999999999999999754322
Q ss_pred hhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCC---CCHHHHHH
Q 002883 781 GLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDR---MKIQDAIM 857 (871)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Pta~evl~ 857 (871)
.. ........ ..... |. ....+..++.+++.+||. +|++| |+++|+++
T Consensus 277 ~~-~~~i~~~~-----~~~~~-------------------p~---~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 277 ET-YGKIVHYK-----EHLSL-------------------PL---VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HH-HHHHHTHH-----HHCCC-------------------C-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HH-HHHHHhcc-----cCcCC-------------------Cc---cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 11 11111000 00000 00 001234567899999999 99998 58988865
No 168
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.5e-39 Score=360.60 Aligned_cols=255 Identities=19% Similarity=0.272 Sum_probs=194.5
Q ss_pred hcCCCCC-ceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHc-CCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSA-NLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRS-IRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|.+. +.||+|+||+||+|++..+++.||||+++.. ..+.+|++++.+ .+||||+++++++... ..+...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence 3567776 7899999999999999999999999998632 456788888744 5899999999988652 223367
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC---CCceEE
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EMVAHV 712 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl 712 (871)
.|+||||+++|+|.+++...... .+++..++.++.||+.||.|||+. +|+||||||+||+++. ++.+||
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl 205 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGDQ-----AFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKL 205 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC--------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEE
T ss_pred EEEEEEeCCCCcHHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEE
Confidence 89999999999999999875422 589999999999999999999999 9999999999999987 789999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhh---hHHHHhh
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGL---SLHKYAK 789 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~---~~~~~~~ 789 (871)
+|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .......
T Consensus 206 ~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~ 281 (400)
T 1nxk_A 206 TDFGFAKETTSHN----SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 281 (400)
T ss_dssp CCCTTCEECC---------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH
T ss_pred EecccccccCCCC----ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc
Confidence 9999998764321 22345689999999999999999999999999999999999999975432211 0011111
Q ss_pred hCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 790 MGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
...... ...+..+..++.+++.+||+.||++|||+.|+++.
T Consensus 282 ~~~~~~----------------------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 282 GQYEFP----------------------------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TCCCCC----------------------------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CcccCC----------------------------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000000 00011234567899999999999999999999874
No 169
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.1e-40 Score=372.12 Aligned_cols=259 Identities=25% Similarity=0.442 Sum_probs=208.3
Q ss_pred HhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 556 KATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 556 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
...++|++.+.||+|+||.||+|++. .+..||||+++.... ..+.+.+|++++++++||||+++++++.. ..
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~~------~~ 256 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK------EP 256 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred echHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEeC------Cc
Confidence 34567899999999999999999996 577899999975443 46789999999999999999999998752 44
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.|+||||+++|+|.+++...... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 257 ~~lv~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DF 328 (454)
T 1qcf_A 257 IYIITEFMAKGSLLDFLKSDEGS-----KQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADF 328 (454)
T ss_dssp CEEEECCCTTCBHHHHHHSHHHH-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECST
T ss_pred cEEEEeecCCCcHHHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeC
Confidence 79999999999999999865432 588999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
|+++...... ........++..|+|||++..+.++.++|||||||++|||+| |+.||......... .........
T Consensus 329 G~a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~--~~i~~~~~~ 404 (454)
T 1qcf_A 329 GLARVIEDNE--YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI--RALERGYRM 404 (454)
T ss_dssp TGGGGBCCHH--HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH--HHHHHTCCC
T ss_pred CCceEcCCCc--eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH--HHHHcCCCC
Confidence 9998764321 111222346788999999988899999999999999999999 99999764332211 111111000
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK 864 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~ 864 (871)
.. ...++.++.+++.+||+.||++|||++++++.|+++..
T Consensus 405 ~~------------------------------~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 405 PR------------------------------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp CC------------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred CC------------------------------CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 00 01233467799999999999999999999999987643
No 170
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=349.96 Aligned_cols=245 Identities=22% Similarity=0.242 Sum_probs=193.0
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCCce
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--GASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 635 (871)
++|++.++||+|+||+||+|++..+++.||||++..... ........|+..+..+ +||||+++++++.+. ..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~-----~~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG-----GI 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC-----CE
Confidence 579999999999999999999998999999999854322 2233455566555555 899999999998765 67
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.|+||||+ +++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DF 201 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAWGA------SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDF 201 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCC
T ss_pred EEEEEecc-CCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccc
Confidence 89999999 7799999876542 599999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
|++....... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... .........+..
T Consensus 202 G~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----~~~~~~~~~~~~ 272 (311)
T 3p1a_A 202 GLLVELGTAG----AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----WQQLRQGYLPPE 272 (311)
T ss_dssp TTCEECC----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----HHHHTTTCCCHH
T ss_pred eeeeecccCC----CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHHhccCCCcc
Confidence 9998765332 2233468999999998765 799999999999999999999776653211 111111111111
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
. ...+..++.+++.+||+.||++|||++|+++
T Consensus 273 ~------------------------------~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 273 F------------------------------TAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp H------------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred c------------------------------ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0 0123456789999999999999999999986
No 171
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.6e-39 Score=346.79 Aligned_cols=266 Identities=18% Similarity=0.267 Sum_probs=209.5
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+.+++.++|++++..+.++... ....+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~----~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAE----GDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEE----TTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCC----CCceE
Confidence 4689999999999999999999988999999999865433 24688999999999998887777666432 25679
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee---CCCCceEEee
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGD 714 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~D 714 (871)
+||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 82 lv~e~~-~~~L~~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 151 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCSR------KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECC
T ss_pred EEEEec-CCCHHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEee
Confidence 999999 9999999975432 589999999999999999999999 99999999999999 4888999999
Q ss_pred cccceecCCCCCCc----cccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhh--hhHHHHh
Q 002883 715 FGLSRLLHDNSPDQ----TSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG--LSLHKYA 788 (871)
Q Consensus 715 fg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~--~~~~~~~ 788 (871)
||.+.......... .......||+.|+|||.+.+..++.++|||||||++|+|++|+.||....... .......
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 231 (296)
T 3uzp_A 152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS 231 (296)
T ss_dssp CTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH
T ss_pred CCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhc
Confidence 99998876543211 11234579999999999999999999999999999999999999998532111 0000000
Q ss_pred hhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 789 KMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
.. .. ..........++.++.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 232 ~~------------~~---------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 232 EK------------KM---------------STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HH------------HH---------------HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cc------------cc---------------CCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 00 00 00000001123456889999999999999999999999999987653
No 172
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.2e-40 Score=359.86 Aligned_cols=279 Identities=21% Similarity=0.231 Sum_probs=193.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-CCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT-RGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 634 (871)
.++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+++++.++||||+++++++..... ....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36899999999999999999999999999999998543 23345678899999999999999999999865421 2235
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+|||++ +++|.+++... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~D 175 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD 175 (367)
T ss_dssp CCEEEEECC-CEECC-----C--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred eEEEEeccc-CCCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEee
Confidence 579999999 78999988652 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||................+.+
T Consensus 176 FG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p 249 (367)
T 2fst_X 176 FGLARHTADE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249 (367)
T ss_dssp ---------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC
T ss_pred cccccccccc------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9999865422 233568999999998776 678999999999999999999999998644332221111112222
Q ss_pred c-hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 794 D-QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 794 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
. .....+.......+ ...............+......+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 250 GAELLKKISSESARNY---IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CHHHHTTCCCHHHHHH---HHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CHHHHHHhhhHHHHHH---HhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 1 11111111111111 1111111111222233344567889999999999999999999986
No 173
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.9e-40 Score=359.75 Aligned_cols=250 Identities=27% Similarity=0.331 Sum_probs=193.9
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc---chHHHHHHHHHH-HHcCCCCccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR---GASKSFIAECEA-LRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|..+ ++.++||||+++++++.+.
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~----- 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA----- 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECS-----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeC-----
Confidence 4679999999999999999999999999999999965432 233456667766 4678999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...|+||||++||+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~ 181 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQRER-------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLT 181 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEEC
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEe
Confidence 67899999999999999997644 589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .........
T Consensus 182 DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-~~~i~~~~~- 256 (373)
T 2r5t_A 182 DFGLCKENIEHN---STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM-YDNILNKPL- 256 (373)
T ss_dssp CCCBCGGGBCCC---CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH-HHHHHHSCC-
T ss_pred eCccccccccCC---CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHhccc-
Confidence 999998643321 223346799999999999999999999999999999999999999975332211 111111100
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
. .++ .+...+.+++.+||+.||++||++.+.++.
T Consensus 257 -~-----------------------~~~-------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 257 -Q-----------------------LKP-------NITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp -C-----------------------CCS-------SSCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred -C-----------------------CCC-------CCCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 0 000 122356789999999999999998644433
No 174
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.2e-40 Score=352.54 Aligned_cols=277 Identities=21% Similarity=0.238 Sum_probs=202.5
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
++|++.+.||+|+||+||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++... ...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK-----RRL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC-----CeE
Confidence 689999999999999999999998999999999854432 2346778999999999999999999998765 668
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 78 ~lv~e~~~~~~l~~~~~~~~-------~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 147 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDRYQR-------GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFG 147 (311)
T ss_dssp EEEEECCSEEHHHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEeCCCchHHHHHhhhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCC
Confidence 99999999999999887543 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhh-hCCCc
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAK-MGLPD 794 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~-~~~~~ 794 (871)
.+....... .......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||............... ....+
T Consensus 148 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (311)
T 4agu_A 148 FARLLTGPS---DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIP 224 (311)
T ss_dssp TCEECC---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH
T ss_pred CchhccCcc---cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccc
Confidence 998765322 12233568999999998765 67899999999999999999999999765433222111111 11111
Q ss_pred hhhh-hcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 QVAE-IIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.... +......... ..............+..+...+.+++.+||+.||++|||++|+++
T Consensus 225 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 225 RHQQVFSTNQYFSGV----KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHHHHHHTCGGGTTC----CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccccccccccC----cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 1000 0000000000 000000000111222345567889999999999999999999985
No 175
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.8e-39 Score=342.49 Aligned_cols=254 Identities=24% Similarity=0.328 Sum_probs=205.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+. ...
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 80 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-----NIQ 80 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC-----CEE
Confidence 467999999999999999999999899999999996443 23457889999999999999999999998765 678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
|+||||+++++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 150 (276)
T 2yex_A 81 YLFLEYCSGGELFDRIEPDI-------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFG 150 (276)
T ss_dssp EEEEECCTTEEGGGGSBTTT-------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEEEEecCCCcHHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCC
Confidence 99999999999999986543 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
.+....... .........|++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||............+........
T Consensus 151 ~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 229 (276)
T 2yex_A 151 LATVFRYNN-RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN 229 (276)
T ss_dssp TCEECEETT-EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTST
T ss_pred CccccCCCc-chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccC
Confidence 998764322 1112234568999999999877665 78899999999999999999999764333222222221110000
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
....+...+.+++.+||+.||++|||++|+++
T Consensus 230 ------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 230 ------------------------------PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ------------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------------------------------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00122345678999999999999999999986
No 176
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=366.83 Aligned_cols=285 Identities=21% Similarity=0.261 Sum_probs=214.2
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.... ....
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC---CCee
Confidence 467999999999999999999999899999999996433 234567889999999999999999999886542 2467
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee----CCCCceEE
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL----DNEMVAHV 712 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl 712 (871)
++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL 157 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNA----YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKL 157 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEE
T ss_pred EEEEecCCCCCHHHHHHhhhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEE
Confidence 9999999999999999875421 2389999999999999999999999 99999999999999 78888999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccC--------CCCCCccchhhHHHHHHHHHhCCCCCchhhhhh---
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL--------GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG--- 781 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~--- 781 (871)
+|||.|+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 158 ~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 233 (396)
T 4eut_A 158 TDFGAARELEDDE----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233 (396)
T ss_dssp CCGGGCEECCCGG----GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH
T ss_pred ecCCCceEccCCC----ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH
Confidence 9999998765422 2233569999999998654 567889999999999999999999997532211
Q ss_pred hhHHHHhhhCCCch-hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHH
Q 002883 782 LSLHKYAKMGLPDQ-VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQ 860 (871)
Q Consensus 782 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~ 860 (871)
........ ..|.. ...+...... .. . +....+............+.+++.+||+.||++|||+.|+++.++
T Consensus 234 ~~~~~~~~-~~p~~~~~~~~~~~~~-~~-----~-~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 234 EVMYKIIT-GKPSGAISGVQKAENG-PI-----D-WSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp HHHHHHHH-SCCTTCCEEEECSTTC-CE-----E-EESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHhc-CCCcccchhheeccCC-Cc-----c-cCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 11112222 12211 1100000000 00 0 000000011112355667889999999999999999999999998
Q ss_pred HHHH
Q 002883 861 EAQK 864 (871)
Q Consensus 861 ~i~~ 864 (871)
++.+
T Consensus 306 ~il~ 309 (396)
T 4eut_A 306 DILH 309 (396)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 8765
No 177
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.4e-40 Score=356.14 Aligned_cols=287 Identities=26% Similarity=0.340 Sum_probs=204.1
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHH--HcCCCCccceeeeeecccCcCCCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEAL--RSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l--~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
..++|++.+.||+|+||.||+|++ +++.||||++..... ..+..|.++. ..++||||+++++.+......+..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred ChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 357899999999999999999987 588999999975432 3444455554 457999999999877655455556
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC------CCCeEecCCCCCceeeCCCC
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC------HTSIVHCDLKPSNVLLDNEM 708 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlkp~Nill~~~~ 708 (871)
..++||||+++|+|.+++... ..++..++.++.|++.||+|||+.. ..+|+||||||+||+++.++
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~ 157 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLH--------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDG 157 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTS
T ss_pred eEEEEEecCCCCcHHHHHhhc--------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCC
Confidence 789999999999999999754 3688999999999999999999862 23899999999999999999
Q ss_pred ceEEeecccceecCCCCCC-----ccccccccccccccCcccccC-------CCCCCccchhhHHHHHHHHHhCCCCCch
Q 002883 709 VAHVGDFGLSRLLHDNSPD-----QTSTSRVKGSIGYVAPEYGAL-------GEVSTHGDEYSFGILMLEMFTGKRPTDD 776 (871)
Q Consensus 709 ~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~elltG~~pf~~ 776 (871)
.+||+|||+|..+...... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||..
T Consensus 158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 237 (336)
T 3g2f_A 158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237 (336)
T ss_dssp CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence 9999999999876543211 112223569999999998776 3567889999999999999999877654
Q ss_pred hhhhhh-hHHHHhhhCCCchhhhhcChhHHHHHHHHHh-hhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHH
Q 002883 777 MFEEGL-SLHKYAKMGLPDQVAEIIDPAILEEALEIQA-GIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQD 854 (871)
Q Consensus 777 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~e 854 (871)
...... ...........+. . ........ .......+........+..++.+++.+||+.||++|||++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 308 (336)
T 3g2f_A 238 GESVPEYQMAFQTEVGNHPT--------F-EDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQX 308 (336)
T ss_dssp TSCCCCCCCTTHHHHCSSCC--------H-HHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred ccchhHHHHhhhcccCCCch--------H-HHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHH
Confidence 221110 0000000000000 0 00000000 00000000111111235567899999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002883 855 AIMELQEAQKM 865 (871)
Q Consensus 855 vl~~L~~i~~~ 865 (871)
+++.|+++...
T Consensus 309 ~l~~L~~ll~~ 319 (336)
T 3g2f_A 309 AEERMAELMMI 319 (336)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHH
Confidence 99999998654
No 178
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.6e-39 Score=352.85 Aligned_cols=269 Identities=23% Similarity=0.370 Sum_probs=210.2
Q ss_pred hhcCCCCCceeeccccceEEEEEEC-------CCCcEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCccceeeeeecc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILG-------TEETNVAVKVLDLQQ-RGASKSFIAECEALRSI-RHRNLVKIITSCSS 627 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 627 (871)
..++|++.+.||+|+||.||+|++. .+++.||+|+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3578999999999999999999985 356789999996543 23456788999999999 89999999999876
Q ss_pred cCcCCCceeeEEEeccCCCCHHHHhhcccccc---------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 002883 628 IDTRGNEFKALVYEFMPNGSLENWLNQKEDEQ---------NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK 698 (871)
Q Consensus 628 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 698 (871)
. ...|+||||+++|+|.+++....... .....+++..++.++.|++.||+|||+. +|+|||||
T Consensus 113 ~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlk 184 (334)
T 2pvf_A 113 D-----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLA 184 (334)
T ss_dssp S-----SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred C-----CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCc
Confidence 5 56899999999999999998654210 0112489999999999999999999999 99999999
Q ss_pred CCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchh
Q 002883 699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM 777 (871)
Q Consensus 699 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~ 777 (871)
|+||+++.++.+||+|||.+........ ........+++.|+|||++.+..++.++|||||||++|+|++ |+.||...
T Consensus 185 p~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 185 ARNVLVTENNVMKIADFGLARDINNIDY-YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp GGGEEECTTCCEEECCCTTCEECTTTSS-EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cceEEEcCCCCEEEcccccccccccccc-ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 9999999999999999999987654321 122233457889999999888889999999999999999999 99999754
Q ss_pred hhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 778 FEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
..... ............ + ..+...+.+++.+||+.||++|||+.|+++
T Consensus 264 ~~~~~--~~~~~~~~~~~~-----------------------~-------~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 264 PVEEL--FKLLKEGHRMDK-----------------------P-------ANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp CHHHH--HHHHHHTCCCCC-----------------------C-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHH--HHHHhcCCCCCC-----------------------C-------ccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 32211 111111000000 0 012345778999999999999999999999
Q ss_pred HHHHHHHHH
Q 002883 858 ELQEAQKMR 866 (871)
Q Consensus 858 ~L~~i~~~~ 866 (871)
.|+++....
T Consensus 312 ~L~~l~~~~ 320 (334)
T 2pvf_A 312 DLDRILTLT 320 (334)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 999997654
No 179
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-39 Score=350.32 Aligned_cols=273 Identities=23% Similarity=0.335 Sum_probs=203.0
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcC--CCCccceeeeeecccCcCCCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSI--RHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~ 634 (871)
..++|++.+.||+|+||.||+|++. ++.||||++.... .....+|.+++... +||||+++++++.... ....
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~ 108 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGT-GSWT 108 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GGGC
T ss_pred cccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CCCC
Confidence 4468999999999999999999985 8899999986433 34555666666665 8999999999986642 2235
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeEecCCCCCceeeCCCCc
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-----HTSIVHCDLKPSNVLLDNEMV 709 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~ 709 (871)
..|+||||+++|+|.++++.. .+++..++.++.|++.||+|||+.. ..+|+||||||+||+++.++.
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST--------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred ceEEEEeccCCCcHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 689999999999999999653 4899999999999999999999752 338999999999999999999
Q ss_pred eEEeecccceecCCCCCCc-cccccccccccccCcccccCCCCCCc------cchhhHHHHHHHHHhC----------CC
Q 002883 710 AHVGDFGLSRLLHDNSPDQ-TSTSRVKGSIGYVAPEYGALGEVSTH------GDEYSFGILMLEMFTG----------KR 772 (871)
Q Consensus 710 ~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~------~DiwSlG~il~elltG----------~~ 772 (871)
+||+|||+|.......... .......||+.|+|||++.+..++.+ +|||||||++|||+|| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 9999999998765432211 11223569999999999887766665 9999999999999999 55
Q ss_pred CCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhH--HhHHHHHHHHHhhhcccccCCCCCCC
Q 002883 773 PTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLR--AKFHEIQVSILRVGILCSEELPRDRM 850 (871)
Q Consensus 773 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RP 850 (871)
||................. ......+... .....+..++.+++.+||+.||++||
T Consensus 261 p~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp 317 (337)
T 3mdy_A 261 PYHDLVPSDPSYEDMREIV-----------------------CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRL 317 (337)
T ss_dssp TTTTTSCSSCCHHHHHHHH-----------------------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSC
T ss_pred cHhhhcCCCCchhhhHHHH-----------------------hhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCC
Confidence 5543221111111110000 0000011100 11125567789999999999999999
Q ss_pred CHHHHHHHHHHHHHHH
Q 002883 851 KIQDAIMELQEAQKMR 866 (871)
Q Consensus 851 ta~evl~~L~~i~~~~ 866 (871)
|+.|+++.|+++.+..
T Consensus 318 s~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 318 TALRVKKTLAKMSESQ 333 (337)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhhc
Confidence 9999999999987654
No 180
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=345.19 Aligned_cols=262 Identities=24% Similarity=0.371 Sum_probs=208.8
Q ss_pred cCCCCCc-eeeccccceEEEEEEC--CCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 559 EGFSSAN-LIGIGGYGYVYKGILG--TEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 559 ~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
++|.+.+ .||+|+||.||+|.+. .+++.||+|+++... ....+.+.+|+++++.++||||+++++++.. .
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------E 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES------S
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC------C
Confidence 4566766 9999999999999863 467889999997543 3345778999999999999999999999832 3
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..++||||+++++|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~D 153 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKRE------EIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISD 153 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCTT------TSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECC
T ss_pred CcEEEEEeCCCCCHHHHHHhCCc------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECc
Confidence 47999999999999999975432 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
||.+.................+|+.|+|||++.+..++.++||||||+++|+|++ |+.||........ .........
T Consensus 154 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~i~~~~~ 231 (287)
T 1u59_A 154 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--MAFIEQGKR 231 (287)
T ss_dssp CTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH--HHHHHTTCC
T ss_pred ccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH--HHHHhcCCc
Confidence 9999887544322222333456889999999888889999999999999999998 9999975432211 111111100
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQ 867 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~~ 867 (871)
.... ..++..+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 232 ~~~~------------------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 232 MECP------------------------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp CCCC------------------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CCCC------------------------------CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 0000 0223467799999999999999999999999999976654
No 181
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.9e-39 Score=342.95 Aligned_cols=259 Identities=27% Similarity=0.453 Sum_probs=208.8
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
..++|++.+.||+|+||.||+|++. +++.||+|++..... ..+.+.+|+++++.++||||+++++++.. ...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~ 82 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ------EPI 82 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcC------CCc
Confidence 3467999999999999999999986 677899999965433 45788999999999999999999998753 347
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
++||||+++++|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~v~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 154 (279)
T 1qpc_A 83 YIITEYMENGSLVDFLKTPSGI-----KLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG 154 (279)
T ss_dssp EEEEECCTTCBHHHHTTSHHHH-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEecCCCCCHHHHHhcCCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCc
Confidence 8999999999999999765322 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
.+....... ........++..|+|||...++.++.++||||||+++|+|++ |+.||........ ...........
T Consensus 155 ~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~~~~~~~~ 230 (279)
T 1qpc_A 155 LARLIEDNE--YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV--IQNLERGYRMV 230 (279)
T ss_dssp TCEECSSSC--EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHHHTTCCCC
T ss_pred ccccccCcc--cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH--HHHHhcccCCC
Confidence 998765432 122223456789999999888889999999999999999999 9999975432211 11111100000
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
.. ..+...+.+++.+|++.||++|||++|+++.|+++.+.
T Consensus 231 ~~------------------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 231 RP------------------------------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp CC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred Cc------------------------------ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 00 02234677999999999999999999999999998654
No 182
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.5e-40 Score=370.63 Aligned_cols=250 Identities=20% Similarity=0.278 Sum_probs=195.2
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
..++|++.+.||+|+||.||+|++..+++.||||+++.. .......+.+|+++++.++||||+++++++...
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----- 220 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH----- 220 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET-----
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC-----
Confidence 346799999999999999999999999999999999643 223345678899999999999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeEecCCCCCceeeCCCCceEE
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH-HCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
...|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||
T Consensus 221 ~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl 290 (446)
T 4ejn_A 221 DRLCFVMEYANGGELFFHLSRER-------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKI 290 (446)
T ss_dssp TEEEEEECCCSSCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEE
T ss_pred CEEEEEEeeCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEE
Confidence 66899999999999999997644 58999999999999999999998 7 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
+|||+|+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||........ .........
T Consensus 291 ~DFG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~ 366 (446)
T 4ejn_A 291 TDFGLCKEGIKD---GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-FELILMEEI 366 (446)
T ss_dssp CCCCCCCTTCC--------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC
T ss_pred ccCCCceeccCC---CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH-HHHHHhCCC
Confidence 999999754322 1223346799999999999999999999999999999999999999975432211 111111100
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-----CHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-----KIQDAIM 857 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----ta~evl~ 857 (871)
. . + .....++.+++.+||+.||++|| |++|+++
T Consensus 367 ~--~-----------------------p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 R--F-----------------------P-------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp C--C-----------------------C-------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C--C-----------------------C-------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 0 0 0 01224567899999999999999 9999986
No 183
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=356.69 Aligned_cols=244 Identities=18% Similarity=0.312 Sum_probs=202.2
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--------chHHHHHHHHHHHHcCCCCccceeeeeeccc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--------GASKSFIAECEALRSIRHRNLVKIITSCSSI 628 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 628 (871)
..++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 35689999999999999999999999999999999965421 1234567899999999999999999998765
Q ss_pred CcCCCceeeEEEeccCCC-CHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC
Q 002883 629 DTRGNEFKALVYEFMPNG-SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE 707 (871)
Q Consensus 629 ~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 707 (871)
...++||||+.+| +|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 102 -----~~~~lv~e~~~~g~~l~~~~~~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 166 (335)
T 3dls_A 102 -----GFFQLVMEKHGSGLDLFAFIDRHP-------RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAED 166 (335)
T ss_dssp -----SEEEEEEECCTTSCBHHHHHHTCC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred -----CEEEEEEEeCCCCccHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCC
Confidence 6789999999776 9999997654 589999999999999999999999 99999999999999999
Q ss_pred CceEEeecccceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHH
Q 002883 708 MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHK 786 (871)
Q Consensus 708 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~ 786 (871)
+.+||+|||.+....... ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.......
T Consensus 167 ~~~kL~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----- 237 (335)
T 3dls_A 167 FTIKLIDFGSAAYLERGK----LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV----- 237 (335)
T ss_dssp SCEEECCCTTCEECCTTC----CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-----
T ss_pred CcEEEeecccceECCCCC----ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-----
Confidence 999999999998765432 2233569999999999888777 789999999999999999999997532110
Q ss_pred HhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 787 YAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
...... .. .+..++.+++.+||+.||++|||+.|+++.
T Consensus 238 --~~~~~~--~~------------------------------~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 --EAAIHP--PY------------------------------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --TTCCCC--SS------------------------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --hhccCC--Cc------------------------------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00 022356789999999999999999999874
No 184
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=8e-39 Score=352.10 Aligned_cols=283 Identities=19% Similarity=0.201 Sum_probs=201.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-CCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT-RGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+.+++.++||||+++++++..... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46899999999999999999999989999999999643 23345678899999999999999999999876532 2234
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 170 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 170 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ceEEEEEcCC-CCHHHHHhh---------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEE
Confidence 7899999996 578888853 488999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhh-hCCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAK-MGLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~-~~~~ 793 (871)
||+|...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||........ +..... ...+
T Consensus 171 fg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~ 245 (371)
T 2xrw_A 171 FGLARTAGTS----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTP 245 (371)
T ss_dssp CCC--------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCC
T ss_pred eecccccccc----cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCC
Confidence 9999865432 122335689999999999988999999999999999999999999986433221 111111 1111
Q ss_pred -chhhhhcChhHHHHHHHH--------HhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 794 -DQVAEIIDPAILEEALEI--------QAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 794 -~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
+.....+.+.+....... .........+............+.+++.+||+.||++|||++|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 246 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 111111111111100000 00000000111112223446778999999999999999999999874
No 185
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.7e-39 Score=347.81 Aligned_cols=251 Identities=24% Similarity=0.308 Sum_probs=202.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|.+.+.||+|+||+||+|++..+++.||+|+++.......+.+.+|+++++.++||||+++++++.+. ...|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 82 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST-----THYY 82 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECS-----SEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccC-----CEEE
Confidence 35799999999999999999999989999999999765544556788999999999999999999998765 6789
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee---CCCCceEEee
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGD 714 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~D 714 (871)
+||||+++++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||++ +.++.+||+|
T Consensus 83 lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~D 152 (304)
T 2jam_A 83 LVMQLVSGGELFDRILERG-------VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITD 152 (304)
T ss_dssp EEECCCCSCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCS
T ss_pred EEEEcCCCccHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEcc
Confidence 9999999999999997643 589999999999999999999999 99999999999999 7888999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||.+...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||........ ...........
T Consensus 153 fg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~ 226 (304)
T 2jam_A 153 FGLSKMEQNG-----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL-FEKIKEGYYEF 226 (304)
T ss_dssp CSTTCCCCCB-----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHCCCCC
T ss_pred CCcceecCCC-----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcCCCCC
Confidence 9999754321 22335689999999999999999999999999999999999999975432211 11111110000
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
. . +....+...+.+++.+||+.||++|||++|+++
T Consensus 227 ~-----~-----------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 227 E-----S-----------------------PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp C-----T-----------------------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred C-----c-----------------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 0 000122346779999999999999999999987
No 186
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=9e-40 Score=354.35 Aligned_cols=251 Identities=22% Similarity=0.315 Sum_probs=199.0
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||.||+|++..+++.||||+++.... ...+|++++.++ +||||+++++++.+. ...
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~-----~~~ 91 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDG-----KYV 91 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECS-----SEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcC-----CEE
Confidence 4579999999999999999999999999999999975443 234688888887 799999999998765 678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC----CceEE
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE----MVAHV 712 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~----~~~kl 712 (871)
|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||++..+ +.+||
T Consensus 92 ~lv~E~~~gg~L~~~i~~~~-------~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQK-------FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp EEEECCCCSCBHHHHHHTCT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred EEEEeCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEE
Confidence 99999999999999997643 589999999999999999999999 99999999999998433 35999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhh-hhHHHHh-hh
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG-LSLHKYA-KM 790 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~-~~~~~~~-~~ 790 (871)
+|||++....... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||.....+. ....... ..
T Consensus 162 ~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~ 238 (342)
T 2qr7_A 162 CDFGFAKQLRAEN---GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG 238 (342)
T ss_dssp CCCTTCEECBCTT---CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHC
T ss_pred EECCCcccCcCCC---CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccC
Confidence 9999998765432 12234568999999999888788999999999999999999999997532211 1111111 11
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
..... . .....+..++.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~~~~-----~-----------------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 239 KFSLS-----G-----------------------GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CCCCC-----S-----------------------TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CcccC-----c-----------------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11000 0 0001233467799999999999999999999863
No 187
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.1e-39 Score=343.67 Aligned_cols=256 Identities=22% Similarity=0.371 Sum_probs=207.5
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-------
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT------- 630 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 630 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ..+.+|+++++.++||||+++++++...+.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 457999999999999999999999899999999997543 346789999999999999999998754211
Q ss_pred ----CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC
Q 002883 631 ----RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706 (871)
Q Consensus 631 ----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 706 (871)
......++||||+++++|.+++..... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG-----EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 123568999999999999999976542 2689999999999999999999999 9999999999999999
Q ss_pred CCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHH
Q 002883 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHK 786 (871)
Q Consensus 707 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~ 786 (871)
++.+||+|||.+....... ......|++.|+|||.+.+..++.++||||||+++|+|++|..||...... ...
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~---~~~ 230 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG----KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF---FTD 230 (284)
T ss_dssp TTEEEECCCTTCEESSCCS----CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH---HHH
T ss_pred CCCEEECcchhheeccccc----cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH---HHH
Confidence 9999999999998775432 122346899999999998889999999999999999999999997642211 000
Q ss_pred HhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 787 YAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
......+ . .+...+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 231 ~~~~~~~----~------------------------------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 231 LRDGIIS----D------------------------------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp HHTTCCC----T------------------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred hhccccc----c------------------------------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 1000000 0 11234668999999999999999999999999886544
No 188
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.2e-39 Score=353.36 Aligned_cols=277 Identities=21% Similarity=0.236 Sum_probs=203.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||+||+|++..+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+.. ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~---~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPV---SRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---TCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCC---CCce
Confidence 36799999999999999999999989999999999643 3477899999999996 999999999986532 2567
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-ceEEeec
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM-VAHVGDF 715 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Df 715 (871)
++||||+++++|.+++.. +++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 109 ~lv~e~~~~~~l~~~~~~----------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Df 175 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQT----------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDW 175 (330)
T ss_dssp EEEEECCCCCCHHHHGGG----------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred EEEEeccCchhHHHHHHh----------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeC
Confidence 999999999999999853 78899999999999999999999 999999999999999776 8999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
|+|........ .....|+..|+|||++.+ ..++.++||||+||++|+|++|+.||...................+
T Consensus 176 g~a~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~ 251 (330)
T 3nsz_A 176 GLAEFYHPGQE----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 251 (330)
T ss_dssp TTCEECCTTCC----CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHH
T ss_pred CCceEcCCCCc----cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCc
Confidence 99987654322 233468999999998776 6789999999999999999999999964433222222222111111
Q ss_pred hhhhhcCh---hHHHHHHHHHhhhh-hhcCc-hhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 QVAEIIDP---AILEEALEIQAGIV-KELQP-NLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 ~~~~~~~~---~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...+.++. .............. ..... ........+..++.+++.+||+.||++||||+|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 252 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11110000 00000000000000 00000 000001124567889999999999999999999986
No 189
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.6e-39 Score=351.73 Aligned_cols=268 Identities=23% Similarity=0.361 Sum_probs=205.9
Q ss_pred hcCCCCCceeeccccceEEEEE-----ECCCCcEEEEEEeecc-ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGI-----LGTEETNVAVKVLDLQ-QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 631 (871)
.++|++.+.||+|+||.||+|+ ...+++.||||++... .......+.+|+.++++++||||+++++++...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 105 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--- 105 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC---
Confidence 4689999999999999999999 4456789999999643 233456788999999999999999999998765
Q ss_pred CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC---CC
Q 002883 632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EM 708 (871)
Q Consensus 632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~ 708 (871)
...|+||||+++++|.+++............+++..++.++.|++.||.|||+. +|+||||||+||+++. +.
T Consensus 106 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 106 --LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp --SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred --CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcc
Confidence 557999999999999999987654333334689999999999999999999999 9999999999999984 44
Q ss_pred ceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHH
Q 002883 709 VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKY 787 (871)
Q Consensus 709 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~ 787 (871)
.+||+|||.+........ ........+++.|+|||++.+..++.++|||||||++|+|++ |+.||....... ....
T Consensus 181 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~ 257 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEF 257 (327)
T ss_dssp CEEECCCHHHHHHHC-------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHH
T ss_pred eEEECccccccccccccc-cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--HHHH
Confidence 699999999986543321 112233467899999999888899999999999999999998 999997543221 1111
Q ss_pred hhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 788 AKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
.......... ..+...+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 258 ~~~~~~~~~~------------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 258 VTSGGRMDPP------------------------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp HHTTCCCCCC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HhcCCCCCCC------------------------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 1111000000 012345678999999999999999999999999886544
No 190
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.8e-39 Score=352.02 Aligned_cols=255 Identities=23% Similarity=0.353 Sum_probs=204.4
Q ss_pred HHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--------chHHHHHHHHHHHHcC-CCCccceeeeee
Q 002883 555 LKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--------GASKSFIAECEALRSI-RHRNLVKIITSC 625 (871)
Q Consensus 555 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 625 (871)
....++|++.+.||+|+||+||+|++..+|+.||||+++.... ...+.+.+|+++++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 3445789999999999999999999988999999999865431 1245678999999999 899999999998
Q ss_pred cccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC
Q 002883 626 SSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD 705 (871)
Q Consensus 626 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~ 705 (871)
... ...|+||||+++++|.+++.... .+++..+..++.||+.||.|||+. ||+||||||+||+++
T Consensus 170 ~~~-----~~~~lv~e~~~g~~L~~~l~~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~ 234 (365)
T 2y7j_A 170 ESS-----SFMFLVFDLMRKGELFDYLTEKV-------ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLD 234 (365)
T ss_dssp EBS-----SEEEEEECCCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred eeC-----CEEEEEEEeCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 665 67899999999999999997643 589999999999999999999999 999999999999999
Q ss_pred CCCceEEeecccceecCCCCCCccccccccccccccCccccc------CCCCCCccchhhHHHHHHHHHhCCCCCchhhh
Q 002883 706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA------LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFE 779 (871)
Q Consensus 706 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 779 (871)
.++.+||+|||++....... ......||+.|+|||++. ...++.++|||||||++|+|++|+.||.....
T Consensus 235 ~~~~ikl~DfG~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 310 (365)
T 2y7j_A 235 DNMQIRLSDFGFSCHLEPGE----KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ 310 (365)
T ss_dssp TTCCEEECCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CCCCEEEEecCcccccCCCc----ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH
Confidence 99999999999998775432 223457999999999865 33688999999999999999999999975322
Q ss_pred hhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 780 EGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.. ............. .+........+.+++.+||+.||++|||+.|+++
T Consensus 311 ~~-~~~~i~~~~~~~~----------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 311 IL-MLRMIMEGQYQFS----------------------------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HH-HHHHHHHTCCCCC----------------------------HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HH-HHHHHHhCCCCCC----------------------------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 1111111110000 0111123446789999999999999999999986
No 191
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=354.07 Aligned_cols=252 Identities=21% Similarity=0.367 Sum_probs=193.8
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCC--CccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRH--RNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 633 (871)
.++|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++.++| |||+++++++...
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~----- 81 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD----- 81 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC-----
Confidence 457999999999999999999985 68899999996443 2334678899999999976 9999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...|+||| +.+++|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+||+++ ++.+||+
T Consensus 82 ~~~~lv~e-~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~ 149 (343)
T 3dbq_A 82 QYIYMVME-CGNIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLI 149 (343)
T ss_dssp SEEEEEEC-CCSEEHHHHHHHSC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEEC
T ss_pred CEEEEEEe-CCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEe
Confidence 67899999 45889999998653 589999999999999999999999 999999999999997 6789999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhh
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-----------GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGL 782 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~ 782 (871)
|||++....... .........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........
T Consensus 150 DFG~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 228 (343)
T 3dbq_A 150 DFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS 228 (343)
T ss_dssp CCSSSCCC-------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH
T ss_pred ecccccccCccc-ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH
Confidence 999998765432 1122334579999999998754 6789999999999999999999999975332222
Q ss_pred hHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 783 SLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
................ .....+.+++.+||+.||++|||+.|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~------------------------------~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 229 KLHAIIDPNHEIEFPD------------------------------IPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHHHHCTTSCCCCCC------------------------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHhcCCcccCCcc------------------------------cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 2211111111100000 012346789999999999999999999864
No 192
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.4e-39 Score=343.74 Aligned_cols=250 Identities=19% Similarity=0.278 Sum_probs=205.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+. .
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~ 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN-----D 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC-----C
Confidence 467999999999999999999999899999999986442 23456788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..++||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 158 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKRRK-------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGD 158 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred EEEEEEecCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEe
Confidence 7899999999999999987643 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||.+....... .......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||........ ..........
T Consensus 159 fg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~- 233 (294)
T 2rku_A 159 FGLATKVEYDG---ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-YLRIKKNEYS- 233 (294)
T ss_dssp CTTCEECCSTT---CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTTCCC-
T ss_pred ccCceecccCc---cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHhhccCC-
Confidence 99998765322 122335689999999999888899999999999999999999999975432211 1111110000
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
... .....+.+++.+||+.||++|||++|+++.
T Consensus 234 -~~~------------------------------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 234 -IPK------------------------------HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -CCT------------------------------TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -Ccc------------------------------ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 112356789999999999999999999874
No 193
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.8e-39 Score=341.47 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=204.3
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+. .
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR-----K 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC-----C
Confidence 467999999999999999999999899999999995432 22346788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..++||||+++++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~D 157 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKHG-------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIAD 157 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred EEEEEEEeCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEec
Confidence 7899999999999999997653 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||.+...... ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||........ ..........
T Consensus 158 fg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~- 230 (284)
T 2vgo_A 158 FGWSVHAPSL-----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-HRRIVNVDLK- 230 (284)
T ss_dssp CTTCEECSSS-----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTTCCC-
T ss_pred ccccccCccc-----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-HHHHhccccC-
Confidence 9999765432 12235689999999999988999999999999999999999999975332211 1111110000
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
.+ ......+.+++.+|++.||++|||++|+++.
T Consensus 231 ------------------------~~-------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 231 ------------------------FP-------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ------------------------CC-------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ------------------------CC-------CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 00 0123456789999999999999999999873
No 194
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.3e-39 Score=352.02 Aligned_cols=261 Identities=17% Similarity=0.236 Sum_probs=204.6
Q ss_pred HHHHHhhcCCCCC-ceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcC-CCCccceeeeeecc
Q 002883 552 AELLKATEGFSSA-NLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSI-RHRNLVKIITSCSS 627 (871)
Q Consensus 552 ~~~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 627 (871)
.......++|.+. +.||+|+||.||+|++..+++.||+|++.... ......+.+|+.+++.+ .||||+++++++..
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3344556678887 89999999999999999999999999996433 33457889999999999 56999999999876
Q ss_pred cCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-
Q 002883 628 IDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN- 706 (871)
Q Consensus 628 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~- 706 (871)
. ...++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 101 ~-----~~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~ 167 (327)
T 3lm5_A 101 T-----SEIILILEYAAGGEIFSLCLPELA-----EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSI 167 (327)
T ss_dssp S-----SEEEEEEECCTTEEGGGGGSSCC------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCB
T ss_pred C-----CeEEEEEEecCCCcHHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecC
Confidence 5 668999999999999999865432 2689999999999999999999999 9999999999999987
Q ss_pred --CCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhH
Q 002883 707 --EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSL 784 (871)
Q Consensus 707 --~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~ 784 (871)
++.+||+|||.+....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||..........
T Consensus 168 ~~~~~~kL~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~ 243 (327)
T 3lm5_A 168 YPLGDIKIVDFGMSRKIGHAC----ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL 243 (327)
T ss_dssp TTBCCEEECCGGGCEEC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred CCCCcEEEeeCccccccCCcc----ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH
Confidence 7899999999998765332 2233569999999999999999999999999999999999999997543322111
Q ss_pred HHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 785 HKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
.......... ......+...+.+++.+||+.||++|||++|+++.
T Consensus 244 -~i~~~~~~~~----------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 244 -NISQVNVDYS----------------------------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp -HHHHTCCCCC----------------------------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -HHHhcccccC----------------------------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1111110000 00011233457789999999999999999999863
No 195
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.2e-39 Score=352.46 Aligned_cols=247 Identities=23% Similarity=0.313 Sum_probs=199.4
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc---chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++... ..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-----HT 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----Ce
Confidence 458899999999999999999988999999999964432 2345788999999999999999999998765 67
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.++||||+. |++.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 198 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVHKK------PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDF 198 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCC
T ss_pred EEEEEecCC-CCHHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeec
Confidence 899999996 688888865432 589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA---LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
|++...... ....||+.|+|||++. .+.++.++|||||||++|||++|+.||......... ........
T Consensus 199 G~a~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~-~~~~~~~~ 270 (348)
T 1u5q_A 199 GSASIMAPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-YHIAQNES 270 (348)
T ss_dssp TTCBSSSSB-------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSCC
T ss_pred cCceecCCC-------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhcCC
Confidence 999865422 2346899999999873 578899999999999999999999999754322211 11111111
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
+.... ......+.+++.+||+.||++|||++|+++.
T Consensus 271 ~~~~~------------------------------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 271 PALQS------------------------------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CCCCC------------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCCC------------------------------CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11000 0122356789999999999999999999864
No 196
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=343.92 Aligned_cols=251 Identities=22% Similarity=0.358 Sum_probs=183.5
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 83 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS----- 83 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS-----
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC-----
Confidence 3467999999999999999999998899999999996432 22346789999999999999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...++||||+++++|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~ 154 (278)
T 3cok_A 84 NYVYLVLEMCHNGEMNRYLKNRVK------PFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIA 154 (278)
T ss_dssp SEEEEEEECCTTEEHHHHHHTCSS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEEC
T ss_pred CeEEEEEecCCCCcHHHHHhhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEE
Confidence 678999999999999999976432 589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||.+....... .......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||........ ........
T Consensus 155 dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~-- 228 (278)
T 3cok_A 155 DFGLATQLKMPH---EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LNKVVLAD-- 228 (278)
T ss_dssp CCTTCEECC-------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------CCSSC--
T ss_pred eecceeeccCCC---CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-HHHHhhcc--
Confidence 999998765322 112235689999999999888899999999999999999999999975321110 00000000
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...+ .....++.+++.+||+.||++|||++|+++
T Consensus 229 -----~~~~-------------------------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 229 -----YEMP-------------------------SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -----CCCC-------------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----cCCc-------------------------cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0000 012335678999999999999999999986
No 197
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.9e-39 Score=362.42 Aligned_cols=254 Identities=20% Similarity=0.294 Sum_probs=194.2
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--------chHHHHHHHHHHHHcCCCCccceeeeeeccc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--------GASKSFIAECEALRSIRHRNLVKIITSCSSI 628 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 628 (871)
..++|.+.+.||+|+||+||+|.+..+++.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 35789999999999999999999999999999999964321 112357899999999999999999998743
Q ss_pred CcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC
Q 002883 629 DTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM 708 (871)
Q Consensus 629 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 708 (871)
...|+||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 212 -----~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~ 276 (419)
T 3i6u_A 212 -----EDYYIVLELMEGGELFDKVVGNK-------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE 276 (419)
T ss_dssp -----SEEEEEEECCTTCBGGGGTSSSC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSS
T ss_pred -----CceEEEEEcCCCCcHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCC
Confidence 34689999999999999887643 589999999999999999999999 999999999999997544
Q ss_pred ---ceEEeecccceecCCCCCCccccccccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhh
Q 002883 709 ---VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA---LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGL 782 (871)
Q Consensus 709 ---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~ 782 (871)
.+||+|||+|+..... .......||+.|+|||++. ...++.++||||+||++|+|++|+.||........
T Consensus 277 ~~~~~kl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~ 352 (419)
T 3i6u_A 277 EDCLIKITDFGHSKILGET----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS 352 (419)
T ss_dssp SSCCEEECCSSTTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC
T ss_pred CcceEEEeecccceecCCC----ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH
Confidence 5999999999876532 2223457999999999875 36788999999999999999999999975322211
Q ss_pred hHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 783 SLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
........... . .......+...+.+++.+||+.||++|||++|+++.
T Consensus 353 ~~~~i~~~~~~-~---------------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 353 LKDQITSGKYN-F---------------------------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHHHHTTCCC-C---------------------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHhcCCCC-C---------------------------CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 11111111000 0 001112334567899999999999999999999873
No 198
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.4e-41 Score=360.17 Aligned_cols=267 Identities=22% Similarity=0.335 Sum_probs=188.0
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHc--CCCCccceeeeeecccCcCCCcee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRS--IRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
++|++.+.||+|+||.||+|++. ++.||||+++.. ....+.+|.+++.. ++||||+++++++.... ......
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC-Ccccee
Confidence 67999999999999999999874 889999998643 33567788888888 79999999999987652 222468
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEecCCCCCceeeCCCC
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLH--------HHCHTSIVHCDLKPSNVLLDNEM 708 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~Nill~~~~ 708 (871)
++||||+++|+|.+++... .+++..++.++.|++.|++||| +. +|+||||||+||+++.++
T Consensus 77 ~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~ 145 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY--------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 145 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC--------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTC
T ss_pred EEEEeccCCCCHHHHHhcc--------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCC
Confidence 9999999999999999653 4788889999999999999999 77 999999999999999999
Q ss_pred ceEEeecccceecCCCCCCc-cccccccccccccCcccccCC------CCCCccchhhHHHHHHHHHhC----------C
Q 002883 709 VAHVGDFGLSRLLHDNSPDQ-TSTSRVKGSIGYVAPEYGALG------EVSTHGDEYSFGILMLEMFTG----------K 771 (871)
Q Consensus 709 ~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltG----------~ 771 (871)
.+||+|||+|.......... .......||+.|+|||++.+. .+++++|||||||++|||++| .
T Consensus 146 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~ 225 (303)
T 3gxj_A 146 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 225 (303)
T ss_dssp CC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCC
T ss_pred CEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceee
Confidence 99999999997765432211 112334699999999987765 345689999999999999999 5
Q ss_pred CCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHH--hHHHHHHHHHhhhcccccCCCCCC
Q 002883 772 RPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRA--KFHEIQVSILRVGILCSEELPRDR 849 (871)
Q Consensus 772 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~R 849 (871)
.||............... .+.. ....+.... ....+...+.+++.+||+.||++|
T Consensus 226 ~p~~~~~~~~~~~~~~~~--------~~~~---------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 282 (303)
T 3gxj_A 226 LPYYDLVPSDPSVEEMRK--------VVCE---------------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 282 (303)
T ss_dssp CTTTTTCC-CCCCC-CHH--------HHTT---------------SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGS
T ss_pred ccccccCCCCccHHHHHH--------HHHH---------------hhcCCCccccccchhhHHHHHHHHHHHhccCcccC
Confidence 555432111100000000 0000 001111111 112455678999999999999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 002883 850 MKIQDAIMELQEAQKM 865 (871)
Q Consensus 850 Pta~evl~~L~~i~~~ 865 (871)
||++|+++.|+++.+.
T Consensus 283 ps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 283 LTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCHHHHHHHHHC-CCC
T ss_pred CCHHHHHHHHHHhhhh
Confidence 9999999999987543
No 199
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-39 Score=342.92 Aligned_cols=263 Identities=23% Similarity=0.325 Sum_probs=204.2
Q ss_pred CCCCCceeeccccceEEEEEECCCCc---EEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 560 GFSSANLIGIGGYGYVYKGILGTEET---NVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 560 ~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.|...+.||+|+||+||+|++..++. .||+|++.... ....+.+.+|+++++.++||||+++++++.+. ...
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP----EGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS----SSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC----CCC
Confidence 46677999999999999999754443 79999986433 23457788999999999999999999998654 233
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.++||||+.+|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Df 168 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQR------NPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADF 168 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTTC------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCT
T ss_pred cEEEEecccCCCHHHHHhcccc------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcC
Confidence 5899999999999999976432 589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCC-CccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 716 GLSRLLHDNSP-DQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 716 g~a~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
|.+........ .........+++.|+|||...+..++.++||||+|+++|+|++|..|+........ ...........
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~ 247 (298)
T 3pls_A 169 GLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHFLAQGRRL 247 (298)
T ss_dssp TSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHHHHTTCCC
T ss_pred CCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHHhhcCCCC
Confidence 99986543211 11122334678999999999999999999999999999999996665543222211 11111111100
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
.... .+...+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 248 ~~~~------------------------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 248 PQPE------------------------------YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp CCCT------------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCCc------------------------------cchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 0000 12245778999999999999999999999999987654
No 200
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.6e-39 Score=349.93 Aligned_cols=250 Identities=19% Similarity=0.278 Sum_probs=205.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+. .
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~ 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN-----D 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----C
Confidence 467999999999999999999999999999999986442 23456788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+++++|.+++.... .+++.+++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~D 184 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRRK-------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGD 184 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECC
T ss_pred eEEEEEecCCCCCHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEee
Confidence 7899999999999999987643 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
||.+....... .......||+.|+|||++.+..++.++||||||+++|+|++|+.||........ ..........
T Consensus 185 fg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~- 259 (335)
T 2owb_A 185 FGLATKVEYDG---ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-YLRIKKNEYS- 259 (335)
T ss_dssp CTTCEECCSTT---CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCCC-
T ss_pred ccCceecccCc---ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHhcCCCC-
Confidence 99998765322 122335689999999999888899999999999999999999999975432211 1111110000
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
... .+...+.+++.+||+.||++|||+.|+++.
T Consensus 260 -~~~------------------------------~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 260 -IPK------------------------------HINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -CCT------------------------------TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -CCc------------------------------cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 112356789999999999999999999873
No 201
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4e-39 Score=368.36 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=199.3
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+.+++.++||||+++++++.+. ...
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~ 111 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK-----RNY 111 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECS-----SEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----CEE
Confidence 46999999999999999999999999999999996442 23357789999999999999999999998765 678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC---CCceEEe
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EMVAHVG 713 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~ 713 (871)
|+||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||+++. ++.+||+
T Consensus 112 ~lv~e~~~~g~L~~~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 112 YLVMECYKGGELFDEIIHRM-------KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp EEEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEE
Confidence 99999999999999887653 589999999999999999999999 9999999999999976 4559999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||+|....... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||........ ..........
T Consensus 182 DfG~a~~~~~~~----~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~ 255 (494)
T 3lij_A 182 DFGLSAVFENQK----KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI-LRKVEKGKYT 255 (494)
T ss_dssp CCTTCEECBTTB----CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCC
T ss_pred ECCCCeECCCCc----cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCC
Confidence 999998765432 233456999999999875 5799999999999999999999999986433221 1111111111
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
.. . +.+..+...+.+++.+||+.||++|||+.|+++.
T Consensus 256 ~~-----~-----------------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 256 FD-----S-----------------------PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CC-----S-----------------------GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CC-----c-----------------------hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 00 0 0111233457799999999999999999999863
No 202
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.5e-39 Score=367.12 Aligned_cols=257 Identities=28% Similarity=0.452 Sum_probs=201.9
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
..++|++.+.||+|+||.||+|.+. .+..||||+++.... ..+.+.+|++++++++||||+++++++.+ ...
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~ 253 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPI 253 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred ChhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC------Cce
Confidence 4567899999999999999999997 456799999975443 35788999999999999999999998754 346
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
|+||||+++|+|.+++...... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 254 ~iv~e~~~~gsL~~~l~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 325 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGETGK-----YLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 325 (452)
T ss_dssp EEEECCCTTCBHHHHHSHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred EEEehhhcCCCHHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCc
Confidence 8999999999999999764322 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
+++...... ........++..|+|||.+.++.++.++|||||||++|||++ |+.||........ ...........
T Consensus 326 ~a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~~~i~~~~~~~ 401 (452)
T 1fmk_A 326 LARLIEDNE--YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--LDQVERGYRMP 401 (452)
T ss_dssp TTC----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHHHTTCCCC
T ss_pred cceecCCCc--eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcCCCCC
Confidence 998765322 112223456789999999888899999999999999999999 9999976433211 11111110000
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQ 863 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~ 863 (871)
. + ..++..+.+++.+||+.||++|||++++++.|+++.
T Consensus 402 ~-----------------------~-------~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 402 C-----------------------P-------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp C-----------------------C-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred C-----------------------C-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 0 0 023346778999999999999999999999998764
No 203
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=348.67 Aligned_cols=282 Identities=21% Similarity=0.289 Sum_probs=201.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-------
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT------- 630 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 630 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++.....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 3689999999999999999999998999999999976666666788999999999999999999998754311
Q ss_pred --CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC-CC
Q 002883 631 --RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD-NE 707 (871)
Q Consensus 631 --~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~ 707 (871)
......|+||||++ |+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++ .+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTED 157 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTT
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 23367899999997 6999999653 489999999999999999999999 999999999999997 56
Q ss_pred CceEEeecccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHH
Q 002883 708 MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHK 786 (871)
Q Consensus 708 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~ 786 (871)
+.+||+|||.+.................++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........ ...
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~ 236 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQL 236 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHH
Confidence 79999999999876543222223334567999999997654 6789999999999999999999999986543221 111
Q ss_pred Hhhh-CCCc--hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 787 YAKM-GLPD--QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 787 ~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.... .... ...+.... . ... ..................+..++.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~-~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 237 ILESIPVVHEEDRQELLSV-I-PVY---IRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHSCCCCHHHHHHHHTT-S-CHH---HHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCchhhhhhhhhc-C-ccc---ccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 1111 1000 00000000 0 000 0000000011111122234667889999999999999999999986
No 204
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.8e-40 Score=364.76 Aligned_cols=261 Identities=16% Similarity=0.164 Sum_probs=194.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHH---HHHcCCCCccceeee-------e
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECE---ALRSIRHRNLVKIIT-------S 624 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~~~~-------~ 624 (871)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+.+.+|++ ++++++||||+++++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46799999999999999999999888999999999632 3345578899995 455558999999984 3
Q ss_pred ecccCc--------C-CC---ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 002883 625 CSSIDT--------R-GN---EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSI 692 (871)
Q Consensus 625 ~~~~~~--------~-~~---~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 692 (871)
+.+... . +. ...|+||||+ +|+|.+++............+++..++.++.||+.||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 332210 0 00 1378999999 6899999987542211111344588889999999999999999 99
Q ss_pred EecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCC-----------CCCCccchhhHH
Q 002883 693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-----------EVSTHGDEYSFG 761 (871)
Q Consensus 693 vH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DiwSlG 761 (871)
+||||||+|||++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG 300 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALG 300 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC------cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHH
Confidence 9999999999999999999999999986432 2234467 999999998877 899999999999
Q ss_pred HHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhccc
Q 002883 762 ILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILC 841 (871)
Q Consensus 762 ~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 841 (871)
|++|||++|+.||......... ....... ..++.++.+++.+|
T Consensus 301 ~il~elltg~~Pf~~~~~~~~~----------~~~~~~~---------------------------~~~~~~~~~li~~~ 343 (377)
T 3byv_A 301 LVIYWIWCADLPITKDAALGGS----------EWIFRSC---------------------------KNIPQPVRALLEGF 343 (377)
T ss_dssp HHHHHHHHSSCCC------CCS----------GGGGSSC---------------------------CCCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCcccccccch----------hhhhhhc---------------------------cCCCHHHHHHHHHH
Confidence 9999999999999753222110 0000000 01234577899999
Q ss_pred ccCCCCCCCCHHHHHH--HHHHHHHHH
Q 002883 842 SEELPRDRMKIQDAIM--ELQEAQKMR 866 (871)
Q Consensus 842 l~~dP~~RPta~evl~--~L~~i~~~~ 866 (871)
|+.||++|||+.|+++ .++++....
T Consensus 344 L~~dp~~Rpt~~e~l~hp~f~~~~~~~ 370 (377)
T 3byv_A 344 LRYPKEDRLLPLQAMETPEYEQLRTEL 370 (377)
T ss_dssp TCSSGGGCCCHHHHHTSHHHHHHHHHH
T ss_pred cCCCchhCCCHHHHhhChHHHHHHHHH
Confidence 9999999999999997 556555443
No 205
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=339.64 Aligned_cols=254 Identities=26% Similarity=0.378 Sum_probs=199.6
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeE
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL 638 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 638 (871)
++|.....||+|+||.||+|++..+++.||||++........+.+.+|+.+++.++||||+++++++... ...++
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~l 96 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN-----GFIKI 96 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC-----CcEEE
Confidence 3455667999999999999999989999999999766655667899999999999999999999998765 67899
Q ss_pred EEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-CCceEEeeccc
Q 002883 639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN-EMVAHVGDFGL 717 (871)
Q Consensus 639 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg~ 717 (871)
||||+++++|.+++..... ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||.
T Consensus 97 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~ 169 (295)
T 2clq_A 97 FMEQVPGGSLSALLRSKWG----PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGT 169 (295)
T ss_dssp EEECCSEEEHHHHHHHTTC----CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTT
T ss_pred EEEeCCCCCHHHHHHhhcc----CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccc
Confidence 9999999999999976532 12467889999999999999999999 9999999999999987 89999999999
Q ss_pred ceecCCCCCCccccccccccccccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE--VSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
+....... .......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||.....................
T Consensus 170 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 2clq_A 170 SKRLAGIN---PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE 246 (295)
T ss_dssp CEESCC--------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCC
T ss_pred ccccCCCC---CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccc
Confidence 98765322 1223356899999999876543 789999999999999999999999753222111111111111000
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.. ..+..++.+++.+||+.||++|||+.|+++
T Consensus 247 ~~------------------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 247 IP------------------------------ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CC------------------------------TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cc------------------------------ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 012345678999999999999999999986
No 206
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-39 Score=358.28 Aligned_cols=281 Identities=18% Similarity=0.225 Sum_probs=201.3
Q ss_pred HHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCc----
Q 002883 555 LKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT---- 630 (871)
Q Consensus 555 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 630 (871)
....++|++.+.||+|+||+||+|++..+++.||||++..... ...+|+++++.++||||+++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 3456789999999999999999999999999999999864432 22469999999999999999999865432
Q ss_pred -----------------------------CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHH
Q 002883 631 -----------------------------RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVL 681 (871)
Q Consensus 631 -----------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L 681 (871)
....+.++||||++ |+|.+.+...... ...+++..++.++.||+.||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~---~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS---GRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc---CCCCCHHHHHHHHHHHHHHH
Confidence 33456899999997 5888877653211 22699999999999999999
Q ss_pred HHHhhcCCCCeEecCCCCCceeeC-CCCceEEeecccceecCCCCCCccccccccccccccCcccccCC-CCCCccchhh
Q 002883 682 EYLHHHCHTSIVHCDLKPSNVLLD-NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYS 759 (871)
Q Consensus 682 ~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwS 759 (871)
+|||+. ||+||||||+||+++ .++.+||+|||.|+...... ......||+.|+|||.+.+. .++.++||||
T Consensus 155 ~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws 227 (383)
T 3eb0_A 155 GFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----PSVAYICSRFYRAPELMLGATEYTPSIDLWS 227 (383)
T ss_dssp HHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS----CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHH
T ss_pred HHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC----CCcCcccCCCccCHHHhcCCCCCCcchhhhh
Confidence 999999 999999999999997 68899999999998765432 22234689999999987764 4899999999
Q ss_pred HHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch--hhhhcChhHHHHHHHHHhhhhhhcCchhHHhH-HHHHHHHHh
Q 002883 760 FGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ--VAEIIDPAILEEALEIQAGIVKELQPNLRAKF-HEIQVSILR 836 (871)
Q Consensus 760 lG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 836 (871)
+||++|||++|+.||......+.........+.+.. .... .+..... .............+ ...+..+.+
T Consensus 228 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 300 (383)
T 3eb0_A 228 IGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRM-NPHYTEV------RFPTLKAKDWRKILPEGTPSLAID 300 (383)
T ss_dssp HHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH-CTTC--C------CCCCCCCCCHHHHSCTTCCHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh-Ccccccc------cCCccCcccHHhhCCCCCCHHHHH
Confidence 999999999999999865433322222222222211 0000 0000000 00000000000000 123456789
Q ss_pred hhcccccCCCCCCCCHHHHHH
Q 002883 837 VGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 837 li~~cl~~dP~~RPta~evl~ 857 (871)
++.+||+.||++|||+.|+++
T Consensus 301 li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 301 LLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHccCChhhCCCHHHHhc
Confidence 999999999999999999985
No 207
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.9e-39 Score=367.94 Aligned_cols=252 Identities=22% Similarity=0.324 Sum_probs=202.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||+||+|++..+++.||||++.... ......+.+|++++++++||||+++++++.+. ..
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~ 95 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-----SS 95 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----SE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC-----CE
Confidence 467999999999999999999999999999999985432 23457889999999999999999999998765 67
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC---CCCceEE
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD---NEMVAHV 712 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl 712 (871)
.|+||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||+++ .++.+||
T Consensus 96 ~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 165 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIKRK-------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKI 165 (486)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEE
T ss_pred EEEEEEcCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 899999999999999987653 589999999999999999999999 999999999999995 4567999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
+|||+|....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||........ .........
T Consensus 166 ~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~ 239 (486)
T 3mwu_A 166 IDFGLSTCFQQNT----KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKY 239 (486)
T ss_dssp CSCSCTTTBCCC--------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCC
T ss_pred EECCcCeECCCCC----ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCC
Confidence 9999998665332 2234569999999999765 699999999999999999999999975432221 111111111
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
+... +.+..+...+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~----------------------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 240 AFDL----------------------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CSCS----------------------------GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCC----------------------------cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1000 0111234457799999999999999999999873
No 208
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5e-39 Score=343.24 Aligned_cols=264 Identities=22% Similarity=0.341 Sum_probs=203.3
Q ss_pred hcCCCCCceeeccccceEEEEEECCC---CcEEEEEEeecc-ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTE---ETNVAVKVLDLQ-QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
..+|++.+.||+|+||+||+|++..+ ...||+|.+... .....+.+.+|+.++++++||||+++++++... .
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~ 99 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----E 99 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS----S
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC----C
Confidence 35688999999999999999997533 346899998643 333457789999999999999999999986543 2
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 100 ~~~~~v~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~ 170 (298)
T 3f66_A 100 GSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVA 170 (298)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEEC
T ss_pred CceEEEEeCCCCCCHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEEC
Confidence 457899999999999999976432 589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCc-cccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhC
Q 002883 714 DFGLSRLLHDNSPDQ-TSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~ 791 (871)
|||.+.......... .......+|+.|+|||.+.+..++.++||||+|+++|+|++ |.+||........ .......
T Consensus 171 Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~-~~~~~~~- 248 (298)
T 3f66_A 171 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQG- 248 (298)
T ss_dssp SCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH-HHHHHTT-
T ss_pred cccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH-HHHHhcC-
Confidence 999998765432111 12233457889999999988899999999999999999999 5556654322211 1111111
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
....... .++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 249 ~~~~~~~------------------------------~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 249 RRLLQPE------------------------------YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp CCCCCCT------------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred CCCCCCc------------------------------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 0000000 11235778999999999999999999999999987643
No 209
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.2e-39 Score=350.43 Aligned_cols=272 Identities=22% Similarity=0.321 Sum_probs=208.2
Q ss_pred HHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHc--CCCCccceeeeeecccCcCC
Q 002883 555 LKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRS--IRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 555 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~ 632 (871)
....++|++.+.||+|+||.||+|++ +++.||||++... ..+.+.+|+++++. ++||||+++++++.... ..
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~~ 111 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GT 111 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-SS
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-Cc
Confidence 34457899999999999999999998 4889999999643 34667889998887 68999999999987652 22
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEecCCCCCceee
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLH--------HHCHTSIVHCDLKPSNVLL 704 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~Nill 704 (871)
....++||||+++|+|.+++... .+++..++.++.|++.||.||| +. +|+||||||+||++
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNRY--------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 180 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEE
T ss_pred cceeEEEEeecCCCcHHHHHhcc--------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEE
Confidence 23689999999999999999753 4899999999999999999999 77 99999999999999
Q ss_pred CCCCceEEeecccceecCCCCCCcc-ccccccccccccCcccccCC------CCCCccchhhHHHHHHHHHhC-------
Q 002883 705 DNEMVAHVGDFGLSRLLHDNSPDQT-STSRVKGSIGYVAPEYGALG------EVSTHGDEYSFGILMLEMFTG------- 770 (871)
Q Consensus 705 ~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltG------- 770 (871)
+.++.+||+|||++........... ......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 260 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence 9999999999999987654321111 22345699999999987765 234789999999999999999
Q ss_pred ---CCCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHH--hHHHHHHHHHhhhcccccCC
Q 002883 771 ---KRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRA--KFHEIQVSILRVGILCSEEL 845 (871)
Q Consensus 771 ---~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~d 845 (871)
..||................... ....+.... ...++...+.+++.+||+.|
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 317 (342)
T 1b6c_B 261 EDYQLPYYDLVPSDPSVEEMRKVVCE-----------------------QKLRPNIPNRWQSCEALRVMAKIMRECWYAN 317 (342)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTT-----------------------SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSS
T ss_pred cccccCccccCcCcccHHHHHHHHHH-----------------------HHhCCCCcccccchhHHHHHHHHHHHHhccC
Confidence 67776532221111111100000 000010000 11245567889999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 002883 846 PRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 846 P~~RPta~evl~~L~~i~~~~ 866 (871)
|++|||+.|+++.|+++.+..
T Consensus 318 p~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 318 GAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp GGGSCCHHHHHHHHHHHHHTT
T ss_pred hhhCCCHHHHHHHHHHHHHHh
Confidence 999999999999999987653
No 210
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.3e-39 Score=366.72 Aligned_cols=252 Identities=24% Similarity=0.330 Sum_probs=202.2
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc-------------chHHHHHHHHHHHHcCCCCccceeeee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR-------------GASKSFIAECEALRSIRHRNLVKIITS 624 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~~ 624 (871)
.++|++.+.||+|+||+||+|++..+++.||+|++..... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 4689999999999999999999999999999999964321 234678899999999999999999999
Q ss_pred ecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee
Q 002883 625 CSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704 (871)
Q Consensus 625 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill 704 (871)
+.+. ...|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 115 ~~~~-----~~~~lv~e~~~gg~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~ 179 (504)
T 3q5i_A 115 FEDK-----KYFYLVTEFYEGGELFEQIINRH-------KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILL 179 (504)
T ss_dssp EECS-----SEEEEEEECCTTCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred EEcC-----CEEEEEEecCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEE
Confidence 8765 67899999999999999997643 589999999999999999999999 99999999999999
Q ss_pred CCCC---ceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhh
Q 002883 705 DNEM---VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG 781 (871)
Q Consensus 705 ~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~ 781 (871)
+.++ .+||+|||+|....... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||.......
T Consensus 180 ~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 254 (504)
T 3q5i_A 180 ENKNSLLNIKIVDFGLSSFFSKDY----KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD 254 (504)
T ss_dssp SSTTCCSSEEECCCTTCEECCTTS----CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ecCCCCccEEEEECCCCEEcCCCC----ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 8775 69999999998775432 223456999999999876 569999999999999999999999998643321
Q ss_pred hhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 782 LSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
. ............ .+.+..++.++.+++.+||+.||++|||++|+++.
T Consensus 255 ~-~~~i~~~~~~~~----------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 255 I-IKKVEKGKYYFD----------------------------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp H-HHHHHHCCCCCC----------------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H-HHHHHcCCCCCC----------------------------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1 111111111000 01112334567899999999999999999999863
No 211
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.5e-39 Score=367.29 Aligned_cols=253 Identities=21% Similarity=0.320 Sum_probs=205.5
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|+++++.++||||+++++++.+.
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~----- 256 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK----- 256 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC-----
Confidence 3467999999999999999999999999999999996432 23346788999999999999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...|+||||++||+|.+++..... ..+++..++.++.||+.||.|||++ +|+||||||+||+++.++.+||+
T Consensus 257 ~~l~lVmEy~~gg~L~~~l~~~~~-----~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~ 328 (576)
T 2acx_A 257 DALCLVLTLMNGGDLKFHIYHMGQ-----AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRIS 328 (576)
T ss_dssp SEEEEEECCCCSCBHHHHHHSSSS-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEEC
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEE
Confidence 678999999999999999976542 2589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhh--hhHHHHhhhC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG--LSLHKYAKMG 791 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~--~~~~~~~~~~ 791 (871)
|||+|....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .........
T Consensus 329 DFGla~~~~~~~----~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~- 403 (576)
T 2acx_A 329 DLGLAVHVPEGQ----TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE- 403 (576)
T ss_dssp CCTTCEECCTTC----CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-
T ss_pred ecccceecccCc----cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-
Confidence 999998765432 2233579999999999998899999999999999999999999997532210 011111110
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-----CHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-----KIQDAIM 857 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----ta~evl~ 857 (871)
.+.... ..+..++.+++.+||+.||++|| +++|+++
T Consensus 404 ~~~~~p------------------------------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 404 VPEEYS------------------------------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CCCCCC------------------------------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ccccCC------------------------------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 000000 01234577999999999999999 7888875
No 212
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.1e-39 Score=357.04 Aligned_cols=251 Identities=22% Similarity=0.375 Sum_probs=193.8
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCC--CCccceeeeeecccCcCCCc
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIR--HRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~ 634 (871)
.+|++.+.||+|+||.||+|.+.. ++.||||++.... ....+.+.+|+++++.++ ||||+++++++... .
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~-----~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-----Q 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----S
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC-----C
Confidence 469999999999999999999874 8999999996443 334577899999999996 59999999998765 5
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||| +.+++|.+++.... .+++.+++.++.||+.||.|||+. +|+||||||+||+++ ++.+||+|
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~D 197 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLID 197 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHCS-------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECC
T ss_pred EEEEEEe-cCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEe
Confidence 6899999 56889999998654 588999999999999999999999 999999999999995 58999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhh
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-----------GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLS 783 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~ 783 (871)
||++........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 198 FG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 276 (390)
T 2zmd_A 198 FGIANQMQPDTT-SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276 (390)
T ss_dssp CSSSCCC----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH
T ss_pred cCccccccCCCc-cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH
Confidence 999987654321 112234579999999998754 46899999999999999999999999753222111
Q ss_pred HHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 784 LHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
................ ....+.+++.+||+.||++|||+.|+++.
T Consensus 277 ~~~~~~~~~~~~~~~~------------------------------~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 277 LHAIIDPNHEIEFPDI------------------------------PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHHHCTTSCCCCCCC------------------------------SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhCccccCCCCcc------------------------------chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111111110000000 12356789999999999999999999864
No 213
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=356.31 Aligned_cols=261 Identities=23% Similarity=0.388 Sum_probs=194.8
Q ss_pred CCCCCceeeccccceEEEEEECCC---CcEEEEEEeecc-ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 560 GFSSANLIGIGGYGYVYKGILGTE---ETNVAVKVLDLQ-QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 560 ~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.|++.+.||+|+||+||+|++..+ +..||+|.++.. .....+.+.+|+.++++++||||+++++++... ...
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----~~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----EGS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC----SSC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC----CCC
Confidence 467789999999999999997433 346899998543 334557889999999999999999999987543 245
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.++||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DF 236 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADF 236 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTTC------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEECCCCCCHHHHHhhccc------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeec
Confidence 7899999999999999976432 488999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCc-cccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCC
Q 002883 716 GLSRLLHDNSPDQ-TSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 716 g~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|+++......... .......+|+.|+|||.+.+..++.++|||||||++|||+| |.+||......... ........
T Consensus 237 G~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~--~~~~~~~~ 314 (373)
T 3c1x_A 237 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGRR 314 (373)
T ss_dssp ---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH--HHHHTTCC
T ss_pred cccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH--HHHHcCCC
Confidence 9998764332111 12233457889999999988999999999999999999999 67777653222111 11111000
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
.. . + ..++..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 315 ~~-----~-------------------p------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 315 LL-----Q-------------------P------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp CC-----C-------------------C------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CC-----C-------------------C------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 00 0 0 01234577899999999999999999999999998654
No 214
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.8e-39 Score=351.64 Aligned_cols=284 Identities=20% Similarity=0.245 Sum_probs=210.0
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|+++++.++||||+++++++...........
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999999899999999996433 2334677899999999999999999998876544445678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
|+||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--------MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEeccC-ccHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecc
Confidence 99999996 6999998753 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCcc-------ccccccccccccCccccc-CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHh
Q 002883 717 LSRLLHDNSPDQT-------STSRVKGSIGYVAPEYGA-LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYA 788 (871)
Q Consensus 717 ~a~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~ 788 (871)
.+........... ......||+.|+|||++. +..++.++|||||||++|+|++|+.||..............
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 237 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence 9987754321111 122346899999999765 46789999999999999999999999986543322222221
Q ss_pred hhCCCch--hh-hhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 789 KMGLPDQ--VA-EIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 789 ~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
....+.. .. ........ +...................+..++.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAR----EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHH----HHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCchhccccccccchhh----HHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1122211 11 11111111 111111111111122222345667889999999999999999999986
No 215
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.2e-39 Score=342.15 Aligned_cols=254 Identities=26% Similarity=0.368 Sum_probs=199.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||.||+|++. ++.||||+++... ..+.+.+|++++++++||||+++++++.+. ....+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC------CCE
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----CCceE
Confidence 468999999999999999999984 8899999996443 457789999999999999999999986543 24579
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL 717 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 717 (871)
+||||+++++|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~ 163 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRGRS-----VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL 163 (278)
T ss_dssp EEECCCTTEEHHHHHHHHHHH-----HCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEecCCCCCHHHHHHhcccc-----cCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccc
Confidence 999999999999999765422 478999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883 718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQV 796 (871)
Q Consensus 718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 796 (871)
+...... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||........ ............
T Consensus 164 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~~~~~~~~~~~ 235 (278)
T 1byg_A 164 TKEASST------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRVEKGYKMDA 235 (278)
T ss_dssp ------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--HHHHTTTCCCCC
T ss_pred ccccccc------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHhcCCCCCC
Confidence 9865432 122357889999999988899999999999999999998 9999975432211 111111000000
Q ss_pred hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
. ..++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 236 ~------------------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 236 P------------------------------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp C------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c------------------------------ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 0 02234577899999999999999999999999998764
No 216
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.5e-38 Score=356.36 Aligned_cols=361 Identities=22% Similarity=0.235 Sum_probs=228.5
Q ss_pred ccCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccc
Q 002883 5 EIPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGL 84 (871)
Q Consensus 5 ~~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 84 (871)
.-|..++++++|++|+|++|+|++ +| .++.+++|++|+|++|++++ +| ++.+++|++|+|++|++++ +| ++.
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~ 104 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTP 104 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTT
T ss_pred ccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCC
Confidence 334456667777777777777774 34 57777777777777777774 33 6777777777777777774 33 677
Q ss_pred cccccccccccccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCcc
Q 002883 85 LKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPED 164 (871)
Q Consensus 85 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~ 164 (871)
+++|++|++++|++++ +| +..+++|++|++++|++.+ ++ ...+++|+.|++++|...+. + .
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~---l~~l~~L~~L~l~~n~~~~~----------~--~ 165 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID---VSHNTQLTELDCHLNKKITK----------L--D 165 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC---CTTCTTCCEEECTTCSCCCC----------C--C
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec---cccCCcCCEEECCCCCcccc----------c--c
Confidence 7777777777777774 33 6666777777777776653 32 23566666666666643321 1 2
Q ss_pred ccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCC
Q 002883 165 LGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGV 244 (871)
Q Consensus 165 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~ 244 (871)
+..+++|++|++++|+++.++ +..+++|++|++++|++++. .+..+ ++|++|++++|++++ +| +
T Consensus 166 ~~~l~~L~~L~ls~n~l~~l~---------l~~l~~L~~L~l~~N~l~~~---~l~~l-~~L~~L~Ls~N~l~~-ip--~ 229 (457)
T 3bz5_A 166 VTPQTQLTTLDCSFNKITELD---------VSQNKLLNRLNCDTNNITKL---DLNQN-IQLTFLDCSSNKLTE-ID--V 229 (457)
T ss_dssp CTTCTTCCEEECCSSCCCCCC---------CTTCTTCCEEECCSSCCSCC---CCTTC-TTCSEEECCSSCCSC-CC--C
T ss_pred cccCCcCCEEECCCCccceec---------cccCCCCCEEECcCCcCCee---ccccC-CCCCEEECcCCcccc-cC--c
Confidence 455666666666666665532 34555666666666666633 13333 346666666666664 33 5
Q ss_pred CCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCE
Q 002883 245 GNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQK 324 (871)
Q Consensus 245 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 324 (871)
..+++|+.|++++|.+++.. ++.+++|+.|++++| +|+.|++++|.+.+.+| ++.+++|+.
T Consensus 230 ~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~ 290 (457)
T 3bz5_A 230 TPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKE 290 (457)
T ss_dssp TTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCC
T ss_pred cccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCE
Confidence 56666666666666666432 334455666655554 24455666666655554 456677777
Q ss_pred EecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcc
Q 002883 325 LDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSF 404 (871)
Q Consensus 325 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 404 (871)
|++++|.+.+.+|. ..++|+.|++++| ++|+.|++++|++++. + +..+++|+.|++++|+|
T Consensus 291 L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l 351 (457)
T 3bz5_A 291 LDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHI 351 (457)
T ss_dssp CCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCC
T ss_pred EECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCC
Confidence 77777776555543 3344444444443 6788888888888863 3 77788888888888888
Q ss_pred cccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCC
Q 002883 405 QGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE 459 (871)
Q Consensus 405 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~ 459 (871)
++ ++.|..|++++|++++. ..+..|..+++++|.++|.+|..
T Consensus 352 ~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 352 QD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp CB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred CC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 75 24566677888888754 34556778888888888887754
No 217
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.2e-39 Score=354.84 Aligned_cols=288 Identities=21% Similarity=0.205 Sum_probs=207.2
Q ss_pred HHHHHHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc-----------chHHHHHHHHHHHHcCCCCccc
Q 002883 551 YAELLKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR-----------GASKSFIAECEALRSIRHRNLV 619 (871)
Q Consensus 551 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv 619 (871)
..++....++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|++++++++||||+
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4566777899999999999999999999987 489999999843221 1236789999999999999999
Q ss_pred eeeeeecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 002883 620 KIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP 699 (871)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 699 (871)
++++++...+.......|+||||++ |+|.+++..... .+++..++.++.|++.||.|||+. +|+||||||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 162 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI------VISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHP 162 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCG
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCCh
Confidence 9999987765555678899999996 688888875432 589999999999999999999999 999999999
Q ss_pred CceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhh
Q 002883 700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMF 778 (871)
Q Consensus 700 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~ 778 (871)
+||+++.++.+||+|||.+...... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....
T Consensus 163 ~NIl~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 238 (362)
T 3pg1_A 163 GNILLADNNDITICDFNLAREDTAD----ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238 (362)
T ss_dssp GGEEECTTCCEEECCTTC-------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred HHEEEcCCCCEEEEecCcccccccc----cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999754432 22233568999999998776 678999999999999999999999998644
Q ss_pred hhhhhHHHHhhhCCCch--hhhhcChhHHHHHHHHHhhhhhhcC-chhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHH
Q 002883 779 EEGLSLHKYAKMGLPDQ--VAEIIDPAILEEALEIQAGIVKELQ-PNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDA 855 (871)
Q Consensus 779 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~ev 855 (871)
..............+.. ...+..+... ..........+ .............+.+++.+||+.||++|||+.|+
T Consensus 239 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 314 (362)
T 3pg1_A 239 FYNQLNKIVEVVGTPKIEDVVMFSSPSAR----DYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314 (362)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHTSCHHHH----HHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHHHHHcCCCChHHhhhccchhhh----HHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 33222211111111111 1111111110 00000000111 11112222345668899999999999999999999
Q ss_pred HH
Q 002883 856 IM 857 (871)
Q Consensus 856 l~ 857 (871)
++
T Consensus 315 l~ 316 (362)
T 3pg1_A 315 LR 316 (362)
T ss_dssp HT
T ss_pred Hc
Confidence 86
No 218
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.4e-39 Score=359.62 Aligned_cols=202 Identities=23% Similarity=0.311 Sum_probs=174.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcC------CCCccceeeeeecccCcC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSI------RHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~ 631 (871)
..+|++.+.||+|+||+||+|++..+++.||||+++... ...+.+.+|+++++.+ .|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~--- 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR--- 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET---
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC---
Confidence 357999999999999999999999899999999996543 2345677888888776 577999999998765
Q ss_pred CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc--
Q 002883 632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV-- 709 (871)
Q Consensus 632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-- 709 (871)
...++||||+. ++|.+++...... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 172 --~~~~lv~e~~~-~~L~~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~ 240 (429)
T 3kvw_A 172 --NHICMTFELLS-MNLYELIKKNKFQ-----GFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSG 240 (429)
T ss_dssp --TEEEEEECCCC-CBHHHHHHHTTTC-----CCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCC
T ss_pred --CeEEEEEeccC-CCHHHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcc
Confidence 67899999995 6999999875432 589999999999999999999999 9999999999999999887
Q ss_pred eEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhh
Q 002883 710 AHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEE 780 (871)
Q Consensus 710 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 780 (871)
+||+|||+|...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 241 vkL~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 305 (429)
T 3kvw_A 241 IKVIDFGSSCYEHQR------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG 305 (429)
T ss_dssp EEECCCTTCEETTCC------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred eEEeecccceecCCc------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 999999999865432 22346899999999999989999999999999999999999999865443
No 219
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2e-38 Score=357.14 Aligned_cols=338 Identities=20% Similarity=0.199 Sum_probs=286.3
Q ss_pred cCccCcCCCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCcccccc
Q 002883 6 IPANITHCSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLL 85 (871)
Q Consensus 6 ~p~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 85 (871)
+| .|..+++|++|+|++|+|++ +| ++.+++|++|+|++|++++. | |+++++|++|+|++|++++ +| ++.+
T Consensus 57 ~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l 126 (457)
T 3bz5_A 57 MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQN 126 (457)
T ss_dssp CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTC
T ss_pred Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCC
Confidence 45 68999999999999999996 44 99999999999999999964 4 8999999999999999995 55 9999
Q ss_pred ccccccccccccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccc
Q 002883 86 KQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDL 165 (871)
Q Consensus 86 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~ 165 (871)
++|++|++++|++++ ++ +..+++|++|++++|...+.++ +..+++|+.|++++|.++ .+| +
T Consensus 127 ~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~-----------~l~--l 187 (457)
T 3bz5_A 127 PLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKIT-----------ELD--V 187 (457)
T ss_dssp TTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCC-----------CCC--C
T ss_pred CcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccc---cccCCcCCEEECCCCccc-----------eec--c
Confidence 999999999999995 43 8899999999999997665663 448999999999999998 444 7
Q ss_pred cCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCC
Q 002883 166 GKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVG 245 (871)
Q Consensus 166 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~ 245 (871)
+.+++|+.|++++|+++.+ .+..+++|++|++++|++++ +| +..+ ++|++|++++|++++.. +.
T Consensus 188 ~~l~~L~~L~l~~N~l~~~---------~l~~l~~L~~L~Ls~N~l~~-ip--~~~l-~~L~~L~l~~N~l~~~~---~~ 251 (457)
T 3bz5_A 188 SQNKLLNRLNCDTNNITKL---------DLNQNIQLTFLDCSSNKLTE-ID--VTPL-TQLTYFDCSVNPLTELD---VS 251 (457)
T ss_dssp TTCTTCCEEECCSSCCSCC---------CCTTCTTCSEEECCSSCCSC-CC--CTTC-TTCSEEECCSSCCSCCC---CT
T ss_pred ccCCCCCEEECcCCcCCee---------ccccCCCCCEEECcCCcccc-cC--cccc-CCCCEEEeeCCcCCCcC---HH
Confidence 7899999999999999874 26788999999999999996 56 5555 57999999999999654 56
Q ss_pred CccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEE
Q 002883 246 NLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKL 325 (871)
Q Consensus 246 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 325 (871)
.+++|+.|++++| +|+.|++++|.+.+.+| ++.+++|+.|+|++|...+.+|. ..++|+.|
T Consensus 252 ~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L 312 (457)
T 3bz5_A 252 TLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITEL 312 (457)
T ss_dssp TCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCC
T ss_pred HCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEe
Confidence 7788999998876 46678899998876666 67889999999999998777664 44667777
Q ss_pred ecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCccc
Q 002883 326 DLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQ 405 (871)
Q Consensus 326 ~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 405 (871)
++++| ++|++|++++|++++. .++.+++|+.|++++|++++ ++.|..|++++|.+.
T Consensus 313 ~l~~~-------------~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~ 368 (457)
T 3bz5_A 313 DLSQN-------------PKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFE 368 (457)
T ss_dssp CCTTC-------------TTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEE
T ss_pred chhhc-------------ccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEE
Confidence 66665 6899999999999964 38999999999999999985 356788899999998
Q ss_pred ccCccccCCCCCCCEEeCCCCcCCCCCcccc
Q 002883 406 GPIHSGFSSLKGLQDLDLSRNNFSGKIPMFL 436 (871)
Q Consensus 406 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 436 (871)
+. ..+..|+.+++++|+++|.+|..+
T Consensus 369 g~-----~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 369 AE-----GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp EE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred ec-----ceeeecCccccccCcEEEEcChhH
Confidence 75 245678889999999999888654
No 220
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.7e-39 Score=340.70 Aligned_cols=259 Identities=22% Similarity=0.312 Sum_probs=205.0
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT---NTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG---GTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC---Cce
Confidence 468999999999999999999999899999999996543 334567889999999999999999999875432 256
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-----eEecCCCCCceeeCCCCce
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS-----IVHCDLKPSNVLLDNEMVA 710 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlkp~Nill~~~~~~ 710 (871)
.++||||+++++|.+++...... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~ 155 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTKE---RQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNV 155 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCE
T ss_pred EEEEEeCCCCCCHHHHHHhhccc---CCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCE
Confidence 89999999999999999765321 22589999999999999999999999 7 9999999999999999999
Q ss_pred EEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh
Q 002883 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790 (871)
Q Consensus 711 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~ 790 (871)
||+|||.+...... ........|++.|+|||.+.+..++.++||||||+++|+|++|+.||........ .......
T Consensus 156 kl~dfg~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~i~~~ 231 (279)
T 2w5a_A 156 KLGDFGLARILNHD---TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-AGKIREG 231 (279)
T ss_dssp EECCCCHHHHC------CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHT
T ss_pred EEecCchheeeccc---cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH-HHHHhhc
Confidence 99999999876432 1222335689999999999888999999999999999999999999985432211 1111111
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQ 860 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~ 860 (871)
..+ .. + ..+..++.+++.+||+.||++|||+.|+++.+.
T Consensus 232 ~~~-~~-----------------------~-------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 232 KFR-RI-----------------------P-------YRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCC-CC-----------------------C-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ccc-cC-----------------------C-------cccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 000 00 0 012345779999999999999999999998653
No 221
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=8.8e-40 Score=353.26 Aligned_cols=269 Identities=22% Similarity=0.379 Sum_probs=210.3
Q ss_pred HHHHhhcCCCCCceeeccccceEEEEEEC-----CCCcEEEEEEeecccc-chHHHHHHHHHHHHcCCCCccceeeeeec
Q 002883 553 ELLKATEGFSSANLIGIGGYGYVYKGILG-----TEETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCS 626 (871)
Q Consensus 553 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 626 (871)
++....++|++.+.||+|+||.||+|++. .+++.||+|++..... .....+.+|+++++.++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 34455678999999999999999999876 3578899999964432 33457889999999999999999999986
Q ss_pred ccCcCCCceeeEEEeccCCCCHHHHhhcccccc---cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCcee
Q 002883 627 SIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQ---NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVL 703 (871)
Q Consensus 627 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nil 703 (871)
+. ...++||||+++|+|.+++....... .....+++..++.++.|++.||.|||+. +|+||||||+||+
T Consensus 99 ~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIl 170 (322)
T 1p4o_A 99 QG-----QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170 (322)
T ss_dssp SS-----SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEE
T ss_pred cC-----CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEE
Confidence 64 56799999999999999997643210 0112578999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhh
Q 002883 704 LDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGL 782 (871)
Q Consensus 704 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~ 782 (871)
++.++.+||+|||.+....... .........+|+.|+|||++.+..++.++||||+||++|+|++ |+.||........
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 249 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 249 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGG-CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH
T ss_pred EcCCCeEEECcCcccccccccc-ccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH
Confidence 9999999999999998654322 1112233457889999999888899999999999999999999 8999975432211
Q ss_pred hHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHH
Q 002883 783 SLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEA 862 (871)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i 862 (871)
.........+.. ...++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 250 -~~~~~~~~~~~~-------------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 250 -LRFVMEGGLLDK-------------------------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp -HHHHHTTCCCCC-------------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred -HHHHHcCCcCCC-------------------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 111111110000 002234577899999999999999999999999875
No 222
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4e-39 Score=348.66 Aligned_cols=265 Identities=23% Similarity=0.376 Sum_probs=206.2
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEE--EEEEeecc-ccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNV--AVKVLDLQ-QRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 633 (871)
.++|++.+.||+|+||.||+|++..++..+ |+|.++.. .....+.+.+|+++++++ +||||+++++++.+.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~----- 98 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR----- 98 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET-----
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeC-----
Confidence 368999999999999999999998788755 99988643 233446788999999999 999999999998765
Q ss_pred ceeeEEEeccCCCCHHHHhhccccc---------ccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDE---------QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill 704 (871)
...|+||||+++++|.+++...... ......+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~ 175 (327)
T 1fvr_A 99 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 175 (327)
T ss_dssp TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEE
Confidence 6789999999999999999765310 01123689999999999999999999999 99999999999999
Q ss_pred CCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhh
Q 002883 705 DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLS 783 (871)
Q Consensus 705 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~ 783 (871)
+.++.+||+|||++...... .......+++.|+|||++.+..++.++|||||||++|+|++ |+.||........
T Consensus 176 ~~~~~~kL~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~- 250 (327)
T 1fvr_A 176 GENYVAKIADFGLSRGQEVY----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL- 250 (327)
T ss_dssp CGGGCEEECCTTCEESSCEE----CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-
T ss_pred cCCCeEEEcccCcCcccccc----ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH-
Confidence 99999999999999743221 11222356889999999888889999999999999999998 9999975432211
Q ss_pred HHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHH
Q 002883 784 LHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQ 863 (871)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~ 863 (871)
............. ..+...+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 251 -~~~~~~~~~~~~~------------------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 251 -YEKLPQGYRLEKP------------------------------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp -HHHGGGTCCCCCC------------------------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHhhcCCCCCCC------------------------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111110000000 012345779999999999999999999999999987
Q ss_pred HHH
Q 002883 864 KMR 866 (871)
Q Consensus 864 ~~~ 866 (871)
+.+
T Consensus 300 ~~~ 302 (327)
T 1fvr_A 300 EER 302 (327)
T ss_dssp HSS
T ss_pred Hhh
Confidence 654
No 223
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.9e-38 Score=339.63 Aligned_cols=251 Identities=23% Similarity=0.330 Sum_probs=206.5
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++... ...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-----TKL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeE
Confidence 467999999999999999999999899999999996543 33457889999999999999999999998765 668
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
++||||+++++|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 96 ~lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg 164 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEPG--------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFG 164 (303)
T ss_dssp EEEEECCTTEEHHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecc
Confidence 9999999999999999653 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQV 796 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 796 (871)
.+....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||......... .......+...
T Consensus 165 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~ 239 (303)
T 3a7i_A 165 VAGQLTDTQ---IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL--FLIPKNNPPTL 239 (303)
T ss_dssp TCEECBTTB---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--HHHHHSCCCCC
T ss_pred cceecCccc---cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH--HHhhcCCCCCC
Confidence 998765432 1223456899999999999899999999999999999999999999754322111 11111111100
Q ss_pred hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHH
Q 002883 797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMEL 859 (871)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L 859 (871)
.. .+...+.+++.+||+.||++|||+.|+++..
T Consensus 240 ~~------------------------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 240 EG------------------------------NYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CS------------------------------SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred cc------------------------------ccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 00 1234577899999999999999999998754
No 224
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.6e-39 Score=344.23 Aligned_cols=254 Identities=23% Similarity=0.312 Sum_probs=200.0
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
..++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|+++++.++||||+++++++... ...
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 91 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD-----GKL 91 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC------CE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC-----CeE
Confidence 346899999999999999999999989999999999766666678899999999999999999999998765 568
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
++||||+++++|.+++..... .+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||
T Consensus 92 ~lv~e~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 162 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLELDR------GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFG 162 (302)
T ss_dssp EEEEECCTTEEHHHHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCH
T ss_pred EEEEEeCCCCcHHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECC
Confidence 999999999999999876432 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccc-----cCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYG-----ALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
.+...... ........||+.|+|||++ .+..++.++||||||+++|+|++|+.||........ ........
T Consensus 163 ~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~ 238 (302)
T 2j7t_A 163 VSAKNLKT---LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLKIAKSD 238 (302)
T ss_dssp HHHHHHHH---HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSC
T ss_pred CCcccccc---ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-HHHHhccC
Confidence 87543211 1112234689999999986 467789999999999999999999999975432211 11111111
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.+.. ..+ ..+...+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~----~~~-------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 239 PPTL----LTP-------------------------SKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp CCCC----SSG-------------------------GGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred Cccc----CCc-------------------------cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1100 000 012345778999999999999999999986
No 225
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7.9e-39 Score=337.60 Aligned_cols=249 Identities=26% Similarity=0.381 Sum_probs=195.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP-----T 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC-----C
Confidence 468999999999999999999999899999999996432 23356788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..++||||+++++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d 154 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKHG-------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIAD 154 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECC
T ss_pred eEEEEEeccCCCcHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEee
Confidence 7899999999999999997653 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
||.+....... ......|++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||........ .........
T Consensus 155 fg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~ 228 (276)
T 2h6d_A 155 FGLSNMMSDGE----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL--FKKIRGGVF 228 (276)
T ss_dssp CCGGGCCCC-----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHCCC
T ss_pred cccccccCCCc----ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH--HHHhhcCcc
Confidence 99998764322 1223468999999999887765 6899999999999999999999975322211 111111000
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
. .+ ......+.+++.+||+.||++|||+.|+++.
T Consensus 229 ~------------------------~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 Y------------------------IP-------EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp C------------------------CC-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred c------------------------Cc-------hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 00 0112356789999999999999999999874
No 226
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=341.17 Aligned_cols=252 Identities=24% Similarity=0.300 Sum_probs=199.9
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ..+.+.+|+.+++.++||||+++++++... ...
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKN-----TDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeC-----CEE
Confidence 4568999999999999999999999899999999997543 346788999999999999999999998765 668
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
|+||||+++++|.+++..... .+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 170 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRNK------TLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFG 170 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred EEEeecCCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecc
Confidence 999999999999999974322 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQV 796 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 796 (871)
.+....... .......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.......... .... ..+...
T Consensus 171 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~-~~~~~~ 245 (314)
T 3com_A 171 VAGQLTDTM---AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-MIPT-NPPPTF 245 (314)
T ss_dssp TCEECBTTB---SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHH-SCCCCC
T ss_pred cchhhhhhc---cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhc-CCCccc
Confidence 998765432 12233568999999999988899999999999999999999999997543221111 1100 000000
Q ss_pred hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.. ...+...+.+++.+||+.||++|||+.|+++
T Consensus 246 ---~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 ---RK-------------------------PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ---SS-------------------------GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---CC-------------------------cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00 0012345778999999999999999999986
No 227
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.2e-39 Score=351.29 Aligned_cols=277 Identities=22% Similarity=0.318 Sum_probs=203.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++.+. ..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK-----KR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC-----CE
Confidence 4689999999999999999999998999999999854432 2345678999999999999999999998765 67
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.++||||+++++|.++..... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 168 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFPN-------GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDF 168 (331)
T ss_dssp EEEEEECCSEEHHHHHHHSTT-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEecCCcchHHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeC
Confidence 899999999999998876543 589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh-CCC
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM-GLP 793 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~-~~~ 793 (871)
|.+....... .......||+.|+|||++.+. .++.++||||+||++|+|++|+.||................ ...
T Consensus 169 g~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (331)
T 4aaa_A 169 GFARTLAAPG---EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLI 245 (331)
T ss_dssp TTC---------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC
T ss_pred CCceeecCCc---cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC
Confidence 9998664322 122335689999999987765 78999999999999999999999997654332222111111 111
Q ss_pred chhhhhcChhHHHHHHHHHhhh-hh--hcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGI-VK--ELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
+........... ..+. .. ..........+.+...+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 246 PRHQELFNKNPV------FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHHHHHHCGG------GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhhhhHhhhccc------cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 110000000000 0000 00 00001112223456678999999999999999999999864
No 228
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3e-39 Score=369.05 Aligned_cols=251 Identities=23% Similarity=0.341 Sum_probs=204.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.+. .
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK-----G 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----C
Confidence 357999999999999999999999999999999995432 33467889999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee---CCCCceE
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAH 711 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~k 711 (871)
..|+||||+.+|+|.+++.... .+++..++.++.||+.||.|||++ +|+||||||+||++ +.++.+|
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 169 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISRK-------RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIR 169 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTCS-------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEE
T ss_pred EEEEEEecCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEE
Confidence 7899999999999999997643 589999999999999999999999 99999999999999 5678999
Q ss_pred EeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
|+|||+|....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||........ ........
T Consensus 170 l~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~ 243 (484)
T 3nyv_A 170 IIDFGLSTHFEASK----KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI-LKKVEKGK 243 (484)
T ss_dssp ECCTTHHHHBCCCC----SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCC
T ss_pred EEeeeeeEEccccc----ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcCC
Confidence 99999998765432 2334569999999998765 799999999999999999999999986432211 11111111
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
..... +.+..++..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~----------------------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 244 YTFEL----------------------------PQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CCCCS----------------------------GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCC----------------------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 11000 011123446779999999999999999999986
No 229
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.8e-39 Score=348.31 Aligned_cols=266 Identities=19% Similarity=0.255 Sum_probs=194.8
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccC---cCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSID---TRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~---~~~~ 633 (871)
..+|++.+.||+|+||.||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++.... ....
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 457999999999999999999999899999999997666666678899999999995 999999999984322 2334
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCceeeCCCCceE
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS--IVHCDLKPSNVLLDNEMVAH 711 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~k 711 (871)
...++||||++ |+|.+++..... ...+++..++.++.||+.||+|||+. + |+||||||+||+++.++.+|
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMES----RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHT----TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEE
T ss_pred ceEEEEEEecC-CCHHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEE
Confidence 67899999995 799999876322 12599999999999999999999998 8 99999999999999999999
Q ss_pred EeecccceecCCCCCCc---------cccccccccccccCcccc---cCCCCCCccchhhHHHHHHHHHhCCCCCchhhh
Q 002883 712 VGDFGLSRLLHDNSPDQ---------TSTSRVKGSIGYVAPEYG---ALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFE 779 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~---~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 779 (871)
|+|||.+.......... .......||+.|+|||++ .+..++.++|||||||++|+|++|+.||.....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 99999998765432211 011134589999999987 566789999999999999999999999975322
Q ss_pred hhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHH
Q 002883 780 EGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMEL 859 (871)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L 859 (871)
... ........... .....+.+++.+||+.||++|||+.|+++.|
T Consensus 259 ~~~-----~~~~~~~~~~~------------------------------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l 303 (337)
T 3ll6_A 259 LRI-----VNGKYSIPPHD------------------------------TQYTVFHSLIRAMLQVNPEERLSIAEVVHQL 303 (337)
T ss_dssp ------------CCCCTTC------------------------------CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred HHh-----hcCcccCCccc------------------------------ccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 110 00000000000 0112356899999999999999999999999
Q ss_pred HHHHHHH
Q 002883 860 QEAQKMR 866 (871)
Q Consensus 860 ~~i~~~~ 866 (871)
+++.+..
T Consensus 304 ~~~~~~~ 310 (337)
T 3ll6_A 304 QEIAAAR 310 (337)
T ss_dssp HHHHHHT
T ss_pred HHHHhcc
Confidence 9987643
No 230
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=353.72 Aligned_cols=269 Identities=14% Similarity=0.179 Sum_probs=204.7
Q ss_pred hcCCCCCceeeccccceEEEEEECC--------CCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccee--------
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGT--------EETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKI-------- 621 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~-------- 621 (871)
.++|++.+.||+|+||.||+|++.. .++.||+|++... +.+.+|++++++++||||+++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999986 4789999998643 457789999999999999984
Q ss_pred -------eeeecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 002883 622 -------ITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVH 694 (871)
Q Consensus 622 -------~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 694 (871)
++++.. .....|+||||+ +++|.+++..... ..+++..++.++.||+.||+|||+. +|+|
T Consensus 116 ~~~i~~~~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH 182 (352)
T 2jii_A 116 LLAIPTCMGFGVH----QDKYRFLVLPSL-GRSLQSALDVSPK-----HVLSERSVLQVACRLLDALEFLHEN---EYVH 182 (352)
T ss_dssp TCSCCCCCEEEEE----TTTEEEEEEECC-CEEHHHHHHHSGG-----GCCCHHHHHHHHHHHHHHHHHHHHT---TCBC
T ss_pred ccCccchhhcccc----CCcEEEEEecCC-CcCHHHHHHhCCc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccC
Confidence 344332 236789999999 9999999987532 2699999999999999999999999 9999
Q ss_pred cCCCCCceeeCCCC--ceEEeecccceecCCCCCC----ccccccccccccccCcccccCCCCCCccchhhHHHHHHHHH
Q 002883 695 CDLKPSNVLLDNEM--VAHVGDFGLSRLLHDNSPD----QTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMF 768 (871)
Q Consensus 695 ~Dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 768 (871)
|||||+||+++.++ .+||+|||+++........ ........||+.|+|||++.+..++.++|||||||++|||+
T Consensus 183 ~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 262 (352)
T 2jii_A 183 GNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWL 262 (352)
T ss_dssp SCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 99999999999998 9999999999876543211 11123347999999999999889999999999999999999
Q ss_pred hCCCCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCC
Q 002883 769 TGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRD 848 (871)
Q Consensus 769 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 848 (871)
+|+.||................ .......+.+.. .....+..++.+++.+||+.||++
T Consensus 263 ~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~dp~~ 320 (352)
T 2jii_A 263 YGFLPWTNCLPNTEDIMKQKQK-FVDKPGPFVGPC---------------------GHWIRPSETLQKYLKVVMALTYEE 320 (352)
T ss_dssp HSCCTTGGGTTCHHHHHHHHHH-HHHSCCCEECTT---------------------SCEECCCHHHHHHHHHHHTCCTTC
T ss_pred hCCCCcccCCcCHHHHHHHHHh-ccCChhhhhhhc---------------------cccCCCcHHHHHHHHHHHhCChhh
Confidence 9999998653221111111100 000000000000 000012346789999999999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 002883 849 RMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 849 RPta~evl~~L~~i~~~~ 866 (871)
|||++|+++.|+++.+..
T Consensus 321 Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 321 KPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp CCCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhc
Confidence 999999999999987654
No 231
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.5e-39 Score=344.38 Aligned_cols=263 Identities=29% Similarity=0.389 Sum_probs=198.6
Q ss_pred hcCCCCCceeeccccceEEEEEECC-CC--cEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGT-EE--TNVAVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 631 (871)
.++|++.+.||+|+||+||+|++.. ++ ..||+|+++.. .....+.+.+|++++++++||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 93 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--- 93 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC---
Confidence 4679999999999999999998642 33 36999998643 233457889999999999999999999998653
Q ss_pred CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 002883 632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711 (871)
Q Consensus 632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 711 (871)
..++||||+++++|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+|
T Consensus 94 ---~~~~v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~k 161 (291)
T 1u46_A 94 ---PMKMVTELAPLGSLLDRLRKHQG------HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVK 161 (291)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHHGG------GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEE
T ss_pred ---CceeeEecccCCCHHHHHHhccC------CcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEE
Confidence 26899999999999999976532 489999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhh
Q 002883 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKM 790 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~ 790 (871)
|+|||.+.................+|..|+|||++.+..++.++||||||+++|+|++ |+.||........ .......
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~~~~ 240 (291)
T 1u46_A 162 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI-LHKIDKE 240 (291)
T ss_dssp ECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-HHHHHTS
T ss_pred EccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH-HHHHHcc
Confidence 9999999887654322223334567889999999888889999999999999999999 9999975432211 1111111
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
...... ...++..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 241 ~~~~~~------------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 241 GERLPR------------------------------PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp CCCCCC------------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CCCCCC------------------------------CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 000000 0122346779999999999999999999999999886544
No 232
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.4e-39 Score=352.67 Aligned_cols=280 Identities=23% Similarity=0.302 Sum_probs=205.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++... ...
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET-----TEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC-----CEE
Confidence 357999999999999999999999999999999997543 33456789999999999999999999998765 668
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
|+||||+++++|.+++.... .+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||
T Consensus 107 ~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg 177 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFG 177 (360)
T ss_dssp EEEECCCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCC
T ss_pred EEEEECCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECC
Confidence 99999999999999997654 5899999999999999999999831 89999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh-C-CCc
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM-G-LPD 794 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~-~-~~~ 794 (871)
.+...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||................ . ...
T Consensus 178 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 252 (360)
T 3eqc_A 178 VSGQLIDS-----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 252 (360)
T ss_dssp CCHHHHHH-----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------
T ss_pred CCcccccc-----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCC
Confidence 99755321 1223568999999999999999999999999999999999999997643332211110000 0 000
Q ss_pred hhh------hhc-----ChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 795 QVA------EII-----DPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 795 ~~~------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
... ... +........+..........+... ...+..++.+++.+||+.||++|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 253 TPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLP--SGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ---------------------CCCHHHHHHHHHHSCCCCCC--TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCC--cccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000 000 000000000000000000000000 01234568899999999999999999999874
No 233
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.7e-39 Score=344.49 Aligned_cols=279 Identities=24% Similarity=0.325 Sum_probs=205.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++... +.
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-----NK 76 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC-----Cc
Confidence 3689999999999999999999998999999999864332 2346788999999999999999999998765 66
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.|+||||++ ++|.+++...... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 77 ~~lv~e~~~-~~L~~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~df 147 (299)
T 2r3i_A 77 LYLVFEFLH-QDLKKFMDASALT-----GIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADF 147 (299)
T ss_dssp EEEEEECCS-EEHHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECST
T ss_pred eEEEEEccc-CCHHHHHHhhhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcc
Confidence 899999996 6999999765422 589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE-VSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
|.+....... .......+|+.|+|||.+.+.. ++.++|||||||++|+|++|+.||......+...........+.
T Consensus 148 g~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 224 (299)
T 2r3i_A 148 GLARAFGVPV---RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224 (299)
T ss_dssp THHHHHCCCS---BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hhhhhccCCc---cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCc
Confidence 9998764321 1223346899999999887655 79999999999999999999999986543332222222212111
Q ss_pred hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
... + +..... ........................++.+++.+||+.||++|||+.|+++
T Consensus 225 ~~~-~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 225 EVV-W--PGVTSM-PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTT-S--TTGGGS-TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhh-h--hHhhcC-cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 100 0 000000 0000000000111111112234467789999999999999999999986
No 234
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-39 Score=350.30 Aligned_cols=279 Identities=22% Similarity=0.285 Sum_probs=200.1
Q ss_pred HhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccc-----hHHHHHHHHHHHHcCCCCccceeeeeecccCc
Q 002883 556 KATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRG-----ASKSFIAECEALRSIRHRNLVKIITSCSSIDT 630 (871)
Q Consensus 556 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 630 (871)
...++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|+++++.++||||+++++++.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 84 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK-- 84 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT--
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC--
Confidence 3457899999999999999999999989999999999643221 124678999999999999999999998665
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCce
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA 710 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 710 (871)
...++||||+++ +|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 85 ---~~~~lv~e~~~~-~l~~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 151 (346)
T 1ua2_A 85 ---SNISLVFDFMET-DLEVIIKDNSL------VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVL 151 (346)
T ss_dssp ---TCCEEEEECCSE-EHHHHHTTCCS------SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred ---CceEEEEEcCCC-CHHHHHHhcCc------CCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCE
Confidence 568999999975 89998876432 588899999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCCccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhh
Q 002883 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAK 789 (871)
Q Consensus 711 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~ 789 (871)
||+|||.+....... .......||+.|+|||++.+. .++.++||||+||++|+|++|.+||...............
T Consensus 152 kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~ 228 (346)
T 1ua2_A 152 KLADFGLAKSFGSPN---RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFET 228 (346)
T ss_dssp EECCCGGGSTTTSCC---CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEEecccceeccCCc---ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 999999998764322 122335689999999987654 5899999999999999999999999765433222221211
Q ss_pred hCCCchhhhhcChhHHHHHHHHHhhhhhhcCc-hhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 790 MGLPDQVAEIIDPAILEEALEIQAGIVKELQP-NLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
...+.. ..+.+..-..... .....+. .....+..+..++.+++.+||+.||++|||++|+++.
T Consensus 229 ~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 229 LGTPTE-EQWPDMCSLPDYV-----TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HCCCCT-TTSSSTTSSTTCC-----CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCCh-hhhhhhccCcccc-----cccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 111111 0000000000000 0000000 0111112344678899999999999999999999863
No 235
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=8.3e-39 Score=351.98 Aligned_cols=279 Identities=20% Similarity=0.228 Sum_probs=206.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcC-CCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTR-GNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 634 (871)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++...... ...
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 368999999999999999999999999999999996432 23356788999999999999999999998765332 122
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~D 187 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILD 187 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECS
T ss_pred eEEEEEcccc-ccHHHHhhc---------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEe
Confidence 3499999996 688888743 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
||.+...... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..................+
T Consensus 188 fg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~ 261 (371)
T 4exu_A 188 FGLARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 261 (371)
T ss_dssp TTCC--------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred cCcccccccC------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999865432 223568999999998776 688999999999999999999999998654333222222222222
Q ss_pred c-hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 794 D-QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 794 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
. ............... ..............+..+...+.+++.+||+.||++|||+.|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 262 GTEFVQKLNDKAAKSYI---QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CHHHHTTCSCHHHHHHH---HHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cHHHHHHhhhhhhhhhh---hccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 2 222222221111111 1111111112222223446778999999999999999999999863
No 236
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.3e-39 Score=349.46 Aligned_cols=285 Identities=21% Similarity=0.270 Sum_probs=206.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCc---CC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDT---RG 632 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 632 (871)
.++|++.+.||+|+||+||+|++..+++.||||++.... ......+.+|+++++.++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 468999999999999999999999899999999985433 2234677899999999999999999999876432 11
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
....|+||||+++ ++.+.+..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl 165 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLV------KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKL 165 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred CceEEEEEeccCC-CHHHHHhhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEE
Confidence 3568999999964 78877765432 589999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCC-ccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhh-
Q 002883 713 GDFGLSRLLHDNSPD-QTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAK- 789 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~- 789 (871)
+|||.|......... ........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...............
T Consensus 166 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~ 245 (351)
T 3mi9_A 166 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 245 (351)
T ss_dssp CCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred ccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 999999876533211 122334568999999998765 46799999999999999999999999865433222111111
Q ss_pred hCCCchhh-hhcChhHHHHHHHHHhhhhhhcCchhHHhHH--HHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 790 MGLPDQVA-EIIDPAILEEALEIQAGIVKELQPNLRAKFH--EIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 790 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...+.... .......... ........+....... .....+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 246 GSITPEVWPNVDNYELYEK-----LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CCCCTTTSTTGGGCGGGTS-----SCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCChhhccccccchhhcc-----cccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 11111111 1000000000 0000000011111111 12346789999999999999999999986
No 237
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=350.98 Aligned_cols=258 Identities=15% Similarity=0.110 Sum_probs=202.9
Q ss_pred hhcCCCCCceeeccccceEEEEE-----ECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC---CCccceeeeeeccc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGI-----LGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR---HRNLVKIITSCSSI 628 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 628 (871)
..++|++.+.||+|+||+||+|+ +..+++.||||+++... ...+.+|+++++.++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34679999999999999999994 56678999999996543 456788888888886 99999999998765
Q ss_pred CcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC--
Q 002883 629 DTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN-- 706 (871)
Q Consensus 629 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-- 706 (871)
+..|+||||+++|+|.+++...... ....+++..++.++.||+.||+|||+. +|+||||||+|||++.
T Consensus 140 -----~~~~lv~e~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 140 -----NGSVLVGELYSYGTLLNAINLYKNT--PEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp -----SCEEEEECCCCSCBHHHHHHHHHTS--TTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGG
T ss_pred -----CCcEEEEeccCCCcHHHHHHHhhcc--cccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccc
Confidence 5679999999999999999764321 122599999999999999999999999 9999999999999988
Q ss_pred ---------CCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchh
Q 002883 707 ---------EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM 777 (871)
Q Consensus 707 ---------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 777 (871)
++.+||+|||+|+.+.... .........||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 288 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFP-KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN 288 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSC-TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred cCccccccccCCEEEeeCchhhhhhccC-CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence 8999999999998664322 223334467999999999999999999999999999999999999999753
Q ss_pred hhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-CHHHHH
Q 002883 778 FEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-KIQDAI 856 (871)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-ta~evl 856 (871)
....... ........ ..+.+.+++..|++.+|.+|+ +++++.
T Consensus 289 ~~~~~~~------------~~~~~~~~-------------------------~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 289 EGGECKP------------EGLFRRLP-------------------------HLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp ETTEEEE------------CSCCTTCS-------------------------SHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred CCCceee------------chhccccC-------------------------cHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 2221100 00000000 012345788889999999994 688888
Q ss_pred HHHHHHHHH
Q 002883 857 MELQEAQKM 865 (871)
Q Consensus 857 ~~L~~i~~~ 865 (871)
+.|+++...
T Consensus 332 ~~l~~~l~~ 340 (365)
T 3e7e_A 332 QKLKKVFQQ 340 (365)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888876544
No 238
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.6e-38 Score=361.29 Aligned_cols=255 Identities=21% Similarity=0.296 Sum_probs=204.3
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+++++.++||||+++++++.+. .
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~-----~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK-----T 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC-----C
Confidence 367999999999999999999999899999999996432 23346788999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||++||+|.+++...... ...+++..++.++.||+.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~D 332 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDED---NPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISD 332 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSSTT---SCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECC
T ss_pred EEEEEEEeccCCCHHHHHHHhhcc---cccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEee
Confidence 689999999999999999764321 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhh--hhHHHHhhhCC
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG--LSLHKYAKMGL 792 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~--~~~~~~~~~~~ 792 (871)
||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...........
T Consensus 333 FGla~~~~~~~---~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~ 409 (543)
T 3c4z_A 333 LGLAVELKAGQ---TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA 409 (543)
T ss_dssp CTTCEECCTTC---CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC
T ss_pred cceeeeccCCC---cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc
Confidence 99998765432 12233579999999999999999999999999999999999999997532110 01111110000
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCH-----HHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKI-----QDAIM 857 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta-----~evl~ 857 (871)
. ..+ ..+...+.+++.+||+.||++||++ +|+++
T Consensus 410 ~------------------------~~p-------~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 410 V------------------------TYP-------DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp C------------------------CCC-------TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred c------------------------CCC-------cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 0 000 0223456789999999999999975 56653
No 239
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.8e-38 Score=339.02 Aligned_cols=253 Identities=24% Similarity=0.349 Sum_probs=203.7
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---------cchHHHHHHHHHHHHcCC-CCccceeeeeec
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---------RGASKSFIAECEALRSIR-HRNLVKIITSCS 626 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 626 (871)
..++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578999999999999999999999999999999996543 122456789999999995 999999999986
Q ss_pred ccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC
Q 002883 627 SIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN 706 (871)
Q Consensus 627 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 706 (871)
.. ...++||||+++++|.+++.... .+++..++.++.|++.||.|||+. +++||||||+||+++.
T Consensus 95 ~~-----~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~ 159 (298)
T 1phk_A 95 TN-----TFFFLVFDLMKKGELFDYLTEKV-------TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDD 159 (298)
T ss_dssp CS-----SEEEEEEECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECT
T ss_pred cC-----CeEEEEEeccCCCcHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcC
Confidence 54 67899999999999999997643 589999999999999999999999 9999999999999999
Q ss_pred CCceEEeecccceecCCCCCCccccccccccccccCccccc------CCCCCCccchhhHHHHHHHHHhCCCCCchhhhh
Q 002883 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA------LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEE 780 (871)
Q Consensus 707 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 780 (871)
++.+||+|||.+....... ......|++.|+|||++. ...++.++||||||+++|+|++|+.||......
T Consensus 160 ~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 235 (298)
T 1phk_A 160 DMNIKLTDFGFSCQLDPGE----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM 235 (298)
T ss_dssp TCCEEECCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred CCcEEEecccchhhcCCCc----ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH
Confidence 9999999999998765432 223356899999999864 457899999999999999999999999753322
Q ss_pred hhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 781 GLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.. ............ . +....+...+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~-~~~~~~~~~~~~-----~-----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 236 LM-LRMIMSGNYQFG-----S-----------------------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HH-HHHHHHTCCCCC-----T-----------------------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HH-HHHHhcCCcccC-----c-----------------------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11 111111110000 0 001123446789999999999999999999986
No 240
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.8e-39 Score=372.62 Aligned_cols=258 Identities=24% Similarity=0.373 Sum_probs=200.5
Q ss_pred CCCCc-eeeccccceEEEEEEC--CCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 561 FSSAN-LIGIGGYGYVYKGILG--TEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 561 y~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
|.+.+ .||+|+||.||+|.+. .++..||||+++... ....+.+.+|++++++++||||+++++++.. +..
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~ 410 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EAL 410 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCe
Confidence 34444 7999999999999875 356779999996543 3356789999999999999999999999854 347
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
++||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 411 ~lv~E~~~~g~L~~~l~~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFG 481 (613)
T 2ozo_A 411 MLVMEMAGGGPLHKFLVGKRE------EIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFG 481 (613)
T ss_dssp EEEEECCTTCBHHHHHTTCTT------TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCS
T ss_pred EEEEEeCCCCcHHHHHhhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeecc
Confidence 999999999999999975432 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
+|+................+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ............
T Consensus 482 la~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~~~~~ 559 (613)
T 2ozo_A 482 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQGKRME 559 (613)
T ss_dssp TTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHHHHHTTCCCC
T ss_pred CcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCCCC
Confidence 99876543222222223346789999999988999999999999999999998 999998643221 111111110000
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
.. ..++.++.+++..||+.||++|||+.++++.|+.+...
T Consensus 560 ~p------------------------------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 560 CP------------------------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CC------------------------------TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CC------------------------------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 00 02335677999999999999999999999999988654
No 241
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.3e-39 Score=373.56 Aligned_cols=252 Identities=25% Similarity=0.366 Sum_probs=198.6
Q ss_pred ceeeccccceEEEEEE--CCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeEEE
Q 002883 565 NLIGIGGYGYVYKGIL--GTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY 640 (871)
Q Consensus 565 ~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 640 (871)
+.||+|+||.||+|.+ ...++.||||+++... ....+.+.+|++++++++||||+++++++.. ...++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES------SSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCEEEEE
Confidence 4799999999999965 4567889999996543 2345789999999999999999999999853 3468999
Q ss_pred eccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL 720 (871)
Q Consensus 641 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 720 (871)
||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|+.
T Consensus 449 E~~~~g~L~~~l~~~~-------~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~ 518 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNR-------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 518 (635)
T ss_dssp ECCTTEEHHHHHHHCT-------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHH
T ss_pred EccCCCCHHHHHhhCC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccc
Confidence 9999999999997643 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCchhhhh
Q 002883 721 LHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQVAEI 799 (871)
Q Consensus 721 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (871)
...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||........ .............
T Consensus 519 ~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--~~~i~~~~~~~~p-- 594 (635)
T 4fl3_A 519 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--TAMLEKGERMGCP-- 594 (635)
T ss_dssp TTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHHHTTCCCCCC--
T ss_pred cccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcCCCCCCC--
Confidence 7654322233333457889999999999999999999999999999998 9999986433221 1111111100000
Q ss_pred cChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883 800 IDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK 864 (871)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~ 864 (871)
..++.++.+++..||+.||++|||+.++++.|+++..
T Consensus 595 ----------------------------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 595 ----------------------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp ----------------------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ----------------------------CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 0223467799999999999999999999999998754
No 242
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.2e-38 Score=344.26 Aligned_cols=252 Identities=21% Similarity=0.286 Sum_probs=197.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--------chHHHHHHHHHHHHcCCCCccceeeeeecccC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--------GASKSFIAECEALRSIRHRNLVKIITSCSSID 629 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 629 (871)
.++|++.+.||+|+||.||+|++..+++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 87 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE- 87 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-
Confidence 4579999999999999999999998999999999854321 1234578999999999999999999997542
Q ss_pred cCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc
Q 002883 630 TRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV 709 (871)
Q Consensus 630 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 709 (871)
..|+||||+++++|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+||+++.++.
T Consensus 88 -----~~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 152 (322)
T 2ycf_A 88 -----DYYIVLELMEGGELFDKVVGNK-------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEE 152 (322)
T ss_dssp -----SEEEEEECCTTEETHHHHSTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSS
T ss_pred -----ceEEEEecCCCCcHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCC
Confidence 3799999999999999997643 589999999999999999999999 9999999999999987654
Q ss_pred ---eEEeecccceecCCCCCCccccccccccccccCcccc---cCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhh
Q 002883 710 ---AHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYG---ALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLS 783 (871)
Q Consensus 710 ---~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~ 783 (871)
+||+|||.+...... .......||+.|+|||++ ....++.++|||||||++|+|++|+.||.........
T Consensus 153 ~~~~kl~Dfg~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 228 (322)
T 2ycf_A 153 DCLIKITDFGHSKILGET----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228 (322)
T ss_dssp SCCEEECCCTTCEECCCC----HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCH
T ss_pred CCeEEEccCccceecccc----cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHH
Confidence 999999999876432 222345689999999985 3567899999999999999999999999753322111
Q ss_pred HHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 784 LHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.......... . .......+...+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~-~---------------------------~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 229 KDQITSGKYN-F---------------------------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHHHTCCC-C---------------------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHhCccc-c---------------------------CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1111111000 0 00011123456789999999999999999999985
No 243
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=337.28 Aligned_cols=255 Identities=21% Similarity=0.311 Sum_probs=199.8
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ----RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 633 (871)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++...+ .
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE---K 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---C
Confidence 478999999999999999999999899999999996432 234577899999999999999999999985432 2
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
...|+||||++++ +.+++...... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~ 151 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSVPEK-----RFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKIS 151 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHSTTC-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred CeEEEEehhccCC-HHHHHHhCccc-----ccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEee
Confidence 5689999999776 77777654322 689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE--VSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
|||.+........ ........||+.|+|||+..+.. ++.++||||+|+++|+|++|+.||........ ........
T Consensus 152 dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~i~~~~ 229 (305)
T 2wtk_C 152 ALGVAEALHPFAA-DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL-FENIGKGS 229 (305)
T ss_dssp CCTTCEECCTTCS-SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHCC
T ss_pred ccccccccCcccc-ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH-HHHHhcCC
Confidence 9999987654321 22233456899999999877543 37899999999999999999999975322111 11110100
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
.+ .+ ..+...+.+++.+||+.||++|||+.|+++.
T Consensus 230 ~~-------------------------~~-------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 YA-------------------------IP-------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CC-------------------------CC-------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CC-------------------------CC-------CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 00 0123456789999999999999999999874
No 244
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.9e-38 Score=357.70 Aligned_cols=267 Identities=21% Similarity=0.289 Sum_probs=206.2
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+|+++++.+.|++.+..+.++... ....+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~----~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVE----GDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEE----TTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEee----CCEEE
Confidence 4689999999999999999999988999999999865433 24578899999999875544444443321 26679
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee---CCCCceEEee
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL---DNEMVAHVGD 714 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~D 714 (871)
+||||+ +++|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 80 lvme~~-g~sL~~ll~~~~~------~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~D 149 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSR------KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIID 149 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECC
T ss_pred EEEECC-CCCHHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEe
Confidence 999999 9999999975432 599999999999999999999999 99999999999999 5889999999
Q ss_pred cccceecCCCCCCc----cccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh
Q 002883 715 FGLSRLLHDNSPDQ----TSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790 (871)
Q Consensus 715 fg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~ 790 (871)
||+++.+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+
T Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~-~~--- 225 (483)
T 3sv0_A 150 FGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ-KY--- 225 (483)
T ss_dssp CTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH-HH---
T ss_pred CCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH-HH---
Confidence 99999876543221 11224679999999999999999999999999999999999999997532211000 00
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM 865 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~ 865 (871)
..+..... ..........++.++.+++..||+.||++||++.++++.|+++...
T Consensus 226 ------~~i~~~~~---------------~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 226 ------EKISEKKV---------------ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp ------HHHHHHHH---------------HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ------HHHhhccc---------------cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 00000000 0000111123356788999999999999999999999999988653
No 245
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=343.46 Aligned_cols=260 Identities=23% Similarity=0.289 Sum_probs=200.0
Q ss_pred HHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcC-C
Q 002883 555 LKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTR-G 632 (871)
Q Consensus 555 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~-~ 632 (871)
....++|++.+.||+|+||.||+|++..+++.||||++..... ..+.+.+|+.+++++ +||||+++++++...... .
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 98 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 98 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence 3456789999999999999999999988999999999965433 446788999999998 899999999998764322 1
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
....|+||||+++++|.+++...... .+++..++.++.||+.||.|||+. +|+||||||+||+++.++.+||
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 99 DDQLWLVMEFCGAGSVTDLIKNTKGN-----TLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp CCEEEEEEECCTTEEHHHHHHHSGGG-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred cceEEEEEEcCCCCcHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEE
Confidence 36789999999999999999875422 689999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHH
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA-----LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKY 787 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~ 787 (871)
+|||++....... .......||+.|+|||++. +..++.++|||||||++|+|++|+.||......... ...
T Consensus 171 ~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~ 246 (326)
T 2x7f_A 171 VDFGVSAQLDRTV---GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-FLI 246 (326)
T ss_dssp CCCTTTC----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHH
T ss_pred eeCcCceecCcCc---cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH-HHh
Confidence 9999998764321 1223356899999999876 567899999999999999999999999754322111 111
Q ss_pred hhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 788 AKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.....+... . ..+...+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~----~--------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 247 PRNPAPRLK----S--------------------------KKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHSCCCCCS----C--------------------------SCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hcCccccCC----c--------------------------cccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111100000 0 012345778999999999999999999987
No 246
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.5e-38 Score=372.50 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=204.2
Q ss_pred HhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcC
Q 002883 556 KATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 556 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 631 (871)
...++|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+..|..++..+ +||+|+++++++.+.
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~--- 414 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM--- 414 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS---
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC---
Confidence 3457899999999999999999999999999999999643 223456778899999988 799999999998765
Q ss_pred CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 002883 632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711 (871)
Q Consensus 632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 711 (871)
...|+||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 415 --~~~~lV~E~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ik 482 (674)
T 3pfq_A 415 --DRLYFVMEYVNGGDLMYHIQQVG-------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIK 482 (674)
T ss_dssp --SEEEEEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEE
T ss_pred --CEEEEEEeCcCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEE
Confidence 67899999999999999998754 599999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
|+|||+|+...... .......||+.|+|||++.+..|+.++|||||||++|||++|+.||........ ........
T Consensus 483 L~DFGla~~~~~~~---~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~-~~~i~~~~ 558 (674)
T 3pfq_A 483 IADFGMCKENIWDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-FQSIMEHN 558 (674)
T ss_dssp ECCCTTCEECCCTT---CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHSSC
T ss_pred EeecceeeccccCC---cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH-HHHHHhCC
Confidence 99999998643321 223446799999999999999999999999999999999999999986432211 11111110
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCH-----HHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKI-----QDAIM 857 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta-----~evl~ 857 (871)
.. ... ....++.+++.+||+.||++||++ +|+++
T Consensus 559 ~~--~p~------------------------------~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 559 VA--YPK------------------------------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp CC--CCT------------------------------TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CC--CCc------------------------------cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 00 000 123456789999999999999997 66553
No 247
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.2e-38 Score=356.13 Aligned_cols=276 Identities=21% Similarity=0.299 Sum_probs=198.4
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-CCCceee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT-RGNEFKA 637 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~~ 637 (871)
.+|++.+.||+|+||.||+|++..+++.||||++..... ...+|+++++.++||||++++++|..... ....+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 468999999999999999999998999999999864332 23469999999999999999999865432 2335578
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC-CceEEeecc
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE-MVAHVGDFG 716 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg 716 (871)
+||||+++ ++.+.+...... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRA---KQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eehhcccc-cHHHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccch
Confidence 99999965 777766542211 23689999999999999999999999 99999999999999965 578999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
+|+....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.........+.+..
T Consensus 203 ~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~ 278 (420)
T 1j1b_A 203 SAKQLVRGEP----NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 278 (420)
T ss_dssp TCEECCTTCC----CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCH
T ss_pred hhhhcccCCC----ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 9987654321 2235689999999987654 7899999999999999999999999864333222111111111110
Q ss_pred --hhhhcChhHHHHHHHHHhhhhhhcCc-hhHHhH-HHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 796 --VAEIIDPAILEEALEIQAGIVKELQP-NLRAKF-HEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 796 --~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
+.+. .+..... ....... .....+ .....++.+++.+||+.||++|||+.|+++
T Consensus 279 ~~~~~~-~~~~~~~-------~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 279 EQIREM-NPNYTEF-------KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHH-CSCCCCC-------CCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhh-Chhhhhh-------ccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 1000 0000000 0000000 000000 122456889999999999999999999985
No 248
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.9e-38 Score=337.41 Aligned_cols=255 Identities=22% Similarity=0.254 Sum_probs=187.3
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||+||+|++..+++.||+|+++.... ...+.+.++...++.++||||+++++++.+. ..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~-----~~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE-----GD 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----SS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc-----CC
Confidence 4689999999999999999999998999999999964422 2223344555557888999999999998765 56
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.++||||++ |+|.+++...... ...+++..++.++.|++.||+|||+. .+|+||||||+||+++.++.+||+||
T Consensus 81 ~~lv~e~~~-~~l~~~l~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Df 154 (290)
T 3fme_A 81 VWICMELMD-TSLDKFYKQVIDK---GQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDF 154 (290)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC
T ss_pred EEEEEehhc-cchHHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeec
Confidence 899999996 5888887653211 23699999999999999999999985 28999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccc----cCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYG----ALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
|.+....... ......||+.|+|||++ .+..++.++||||+||++|+|++|+.||.................
T Consensus 155 g~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 230 (290)
T 3fme_A 155 GISGYLVDDV----AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 230 (290)
T ss_dssp -------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC
T ss_pred CCcccccccc----cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccC
Confidence 9998765432 22234689999999985 566789999999999999999999999975322222222222211
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.+.... .....++.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~------------------------------~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 231 SPQLPA------------------------------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCCCCT------------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCccc------------------------------ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111100 012345778999999999999999999988
No 249
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.7e-38 Score=349.58 Aligned_cols=204 Identities=25% Similarity=0.308 Sum_probs=172.1
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CC-----ccceeeeeecccCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-HR-----NLVKIITSCSSIDT 630 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~ 630 (871)
..++|++.+.||+|+||+||+|++..+++.||||+++... .....+.+|+.+++.++ |+ +++++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-- 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR-- 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET--
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC--
Confidence 4578999999999999999999999899999999996432 23466778888888874 54 489999988765
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC--CCC
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD--NEM 708 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~--~~~ 708 (871)
...|+||||++ ++|.+++...... .+++..++.++.|++.||.|||++ ..+|+||||||+||+++ .++
T Consensus 129 ---~~~~lv~e~~~-~~L~~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~ 198 (382)
T 2vx3_A 129 ---NHLCLVFEMLS-YNLYDLLRNTNFR-----GVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRS 198 (382)
T ss_dssp ---TEEEEEEECCC-CBHHHHHHHTTTS-----CCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSC
T ss_pred ---CceEEEEecCC-CCHHHHHhhcCcC-----CCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCC
Confidence 67899999995 5999999875422 589999999999999999999952 12999999999999994 577
Q ss_pred ceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhh
Q 002883 709 VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFE 779 (871)
Q Consensus 709 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 779 (871)
.+||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 199 ~~kL~DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQR------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp CEEECCCTTCEETTCC------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cEEEEeccCceecccc------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 8999999999876432 2235689999999999999999999999999999999999999986443
No 250
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=355.14 Aligned_cols=327 Identities=20% Similarity=0.185 Sum_probs=296.5
Q ss_pred ccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCC
Q 002883 137 IRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLP 216 (871)
Q Consensus 137 L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 216 (871)
-+.++.+++.++ .+|..+. ++++.|+|++|+++.+++ ..+..+++|++|+|++|.+++..|
T Consensus 13 ~~~v~c~~~~l~-----------~ip~~~~--~~l~~L~L~~n~l~~~~~------~~~~~l~~L~~L~L~~n~i~~~~~ 73 (477)
T 2id5_A 13 DRAVLCHRKRFV-----------AVPEGIP--TETRLLDLGKNRIKTLNQ------DEFASFPHLEELELNENIVSAVEP 73 (477)
T ss_dssp TTEEECCSCCCS-----------SCCSCCC--TTCSEEECCSSCCCEECT------TTTTTCTTCCEEECTTSCCCEECT
T ss_pred CCEEEeCCCCcC-----------cCCCCCC--CCCcEEECCCCccceECH------hHccCCCCCCEEECCCCccCEeCh
Confidence 357888888887 5565553 589999999999988653 467789999999999999998888
Q ss_pred hhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCc
Q 002883 217 NSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLI 296 (871)
Q Consensus 217 ~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 296 (871)
..+..+ ++|++|+|++|+++...+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|.+++
T Consensus 74 ~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 152 (477)
T 2id5_A 74 GAFNNL-FNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN 152 (477)
T ss_dssp TTTTTC-TTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCT
T ss_pred hhhhCC-ccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCC
Confidence 888887 4799999999999987778899999999999999999999899999999999999999999988888999999
Q ss_pred cccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCC
Q 002883 297 FLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLS 376 (871)
Q Consensus 297 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~ 376 (871)
+|++|+|++|++++..+..|.++++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|+.|+|+
T Consensus 153 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 232 (477)
T 2id5_A 153 SLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSIT 232 (477)
T ss_dssp TCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEE
T ss_pred CCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECc
Confidence 99999999999998888889999999999999999998888899999999999999999887888777777899999999
Q ss_pred CCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccC
Q 002883 377 ENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEV 456 (871)
Q Consensus 377 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~ 456 (871)
+|.+++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..
T Consensus 233 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 312 (477)
T 2id5_A 233 HCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLE 312 (477)
T ss_dssp SSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeC
Confidence 99999665578999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCC-cccccccceeccCCCCCccCCCcc
Q 002883 457 PSE-GVFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 457 ~~~-~~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
+.. ..+++++.+++.+|+|.|+|...|
T Consensus 313 ~~~~~~l~~L~~L~l~~N~l~c~c~~~~ 340 (477)
T 2id5_A 313 ESVFHSVGNLETLILDSNPLACDCRLLW 340 (477)
T ss_dssp GGGBSCGGGCCEEECCSSCEECSGGGHH
T ss_pred HhHcCCCcccCEEEccCCCccCccchHh
Confidence 643 456789999999999999998665
No 251
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.6e-38 Score=344.02 Aligned_cols=280 Identities=24% Similarity=0.317 Sum_probs=205.4
Q ss_pred hhcCCCCCceeeccccceEEEEEEC-CCCcEEEEEEeecccc--chHHHHHHHHHHHHcC---CCCccceeeeeecccCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILG-TEETNVAVKVLDLQQR--GASKSFIAECEALRSI---RHRNLVKIITSCSSIDT 630 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~ 630 (871)
..++|++.+.||+|+||.||+|++. .+++.||+|+++.... .....+.+|+.+++.+ +||||+++++++.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999999995 6789999999864332 1223566777777766 89999999999874433
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCce
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVA 710 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 710 (871)
......++||||++ |+|.+++...... .+++..++.++.|++.||.|||+. ||+||||||+||+++.++.+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~ 159 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEP-----GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQI 159 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCE
Confidence 34577899999997 6999999765422 589999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh
Q 002883 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790 (871)
Q Consensus 711 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~ 790 (871)
||+|||.+...... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||................
T Consensus 160 kl~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~ 235 (326)
T 1blx_A 160 KLADFGLARIYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235 (326)
T ss_dssp EECSCCSCCCCCGG----GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred EEecCcccccccCC----CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHc
Confidence 99999999865421 22334568999999999988899999999999999999999999998644332211111111
Q ss_pred CCCch--hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 791 GLPDQ--VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 791 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
..+.. ......... . ................+...+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 236 GLPGEEDWPRDVALPR--Q------AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCCCGGGSCTTCSSCG--G------GSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCcccCccccccch--h------hhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11110 000000000 0 00000000011111233456789999999999999999999985
No 252
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.9e-39 Score=369.31 Aligned_cols=257 Identities=28% Similarity=0.447 Sum_probs=205.9
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
..++|++.+.||+|+||.||+|++. .+..||||+++.... ..+.+.+|++++++++||||+++++++.+ ...
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~ 336 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPI 336 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred chhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee------ccc
Confidence 4567899999999999999999997 456799999975443 35789999999999999999999998754 347
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
|+||||+++|+|.+++...... .+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 408 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETGK-----YLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 408 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTT
T ss_pred eEeeehhcCCcHHHHHhhcCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccc
Confidence 8999999999999999764322 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
+++...... ........++..|+|||++.++.++.++|||||||++|||++ |+.||........ ...........
T Consensus 409 ~a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~--~~~i~~~~~~~ 484 (535)
T 2h8h_A 409 LARLIEDNE--YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--LDQVERGYRMP 484 (535)
T ss_dssp STTTCCCHH--HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH--HHHHHTTCCCC
T ss_pred cceecCCCc--eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcCCCCC
Confidence 998654211 111222346788999999888899999999999999999999 9999976433211 11111110000
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQ 863 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~ 863 (871)
. ...+...+.+++.+||+.||++|||++++++.|+++.
T Consensus 485 ~------------------------------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 485 C------------------------------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp C------------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred C------------------------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0 0023345778999999999999999999999998763
No 253
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=353.72 Aligned_cols=209 Identities=22% Similarity=0.294 Sum_probs=157.1
Q ss_pred CCCC-CceeeccccceEEEEEEC--CCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 560 GFSS-ANLIGIGGYGYVYKGILG--TEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 560 ~y~~-~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.|++ .++||+|+||+||+|++. .+++.||||++.... ....+.+|+++++.++||||+++++++.... ....
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---~~~~ 95 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHA---DRKV 95 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETT---TTEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCC---CCeE
Confidence 4665 568999999999999965 468899999996443 2357889999999999999999999985432 2678
Q ss_pred eEEEeccCCCCHHHHhhcccccc--cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee----CCCCce
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQ--NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL----DNEMVA 710 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~ 710 (871)
|+||||++ ++|.+++....... .....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcE
Confidence 99999995 58888886543211 1122489999999999999999999999 99999999999999 677899
Q ss_pred EEeecccceecCCCCCCccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchh
Q 002883 711 HVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDM 777 (871)
Q Consensus 711 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~ 777 (871)
||+|||+|+................||+.|+|||++.+. .++.++||||+||++|+|++|+.||...
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 999999998775432222333446799999999988764 5899999999999999999999999643
No 254
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.4e-38 Score=333.01 Aligned_cols=248 Identities=17% Similarity=0.249 Sum_probs=198.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 634 (871)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+..+..+ +||||+++++++.+. .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~-----~ 84 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED-----D 84 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET-----T
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----C
Confidence 467999999999999999999999899999999996532 33456788999999999 999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC-------
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE------- 707 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~------- 707 (871)
..++||||+++++|.+++...... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~ 158 (289)
T 1x8b_A 85 HMLIQNEYCNGGSLADAISENYRI---MSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAAS 158 (289)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------
T ss_pred eEEEEEEecCCCcHHHHHHhhccc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccc
Confidence 789999999999999999765321 12589999999999999999999999 99999999999999844
Q ss_pred ------------CceEEeecccceecCCCCCCccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCC
Q 002883 708 ------------MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPT 774 (871)
Q Consensus 708 ------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf 774 (871)
..+||+|||.+....... ...||+.|+|||.+.+. .+++++|||||||++|+|++|.+|+
T Consensus 159 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 231 (289)
T 1x8b_A 159 EEGDEDDWASNKVMFKIGDLGHVTRISSPQ-------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLP 231 (289)
T ss_dssp -----------CCCEEECCCTTCEETTCSC-------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred cccccccccCCceEEEEcccccccccCCcc-------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCC
Confidence 479999999998765321 23489999999988765 5668999999999999999999877
Q ss_pred chhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHH
Q 002883 775 DDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQD 854 (871)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~e 854 (871)
..... .........+. ... .+...+.+++.+||+.||++|||+.|
T Consensus 232 ~~~~~----~~~~~~~~~~~-~~~------------------------------~~~~~~~~li~~~l~~dp~~Rps~~~ 276 (289)
T 1x8b_A 232 RNGDQ----WHEIRQGRLPR-IPQ------------------------------VLSQEFTELLKVMIHPDPERRPSAMA 276 (289)
T ss_dssp SSSHH----HHHHHTTCCCC-CSS------------------------------CCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred cchhH----HHHHHcCCCCC-CCc------------------------------ccCHHHHHHHHHHhCCCcccCCCHHH
Confidence 53211 11111111110 000 12345678999999999999999999
Q ss_pred HHHH
Q 002883 855 AIME 858 (871)
Q Consensus 855 vl~~ 858 (871)
+++.
T Consensus 277 ll~h 280 (289)
T 1x8b_A 277 LVKH 280 (289)
T ss_dssp HHTC
T ss_pred HhhC
Confidence 9863
No 255
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.6e-38 Score=343.26 Aligned_cols=256 Identities=23% Similarity=0.272 Sum_probs=198.0
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHH-HHcCCCCccceeeeeecccCcCCCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR-GASKSFIAECEA-LRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
..++|++.+.||+|+||+||+|++..+++.||||+++.... .....+..|..+ ++.++||||+++++++... +
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~-----~ 123 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE-----G 123 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS-----S
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC-----C
Confidence 34689999999999999999999988999999999965432 233455566665 6778999999999998765 5
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..|+||||+++ +|.+++...... ...+++..++.++.||+.||+|||+. .+|+||||||+||+++.++.+||+|
T Consensus 124 ~~~lv~e~~~~-~L~~~l~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~D 197 (340)
T 3an0_A 124 DVWICMELMDT-SLDKFYKQVIDK---GQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCD 197 (340)
T ss_dssp CEEEEECCCSE-EHHHHHHHHHHT---SCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECC
T ss_pred cEEEEHHHhhC-cHHHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEee
Confidence 68999999975 999988753211 23699999999999999999999974 2899999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCccccc----CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA----LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~ 790 (871)
||++...... .......||+.|+|||++. ...++.++|||||||++|||++|+.||................
T Consensus 198 fg~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 273 (340)
T 3an0_A 198 FGISGYLVDS----VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 273 (340)
T ss_dssp CSHHHHHSCH----HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHS
T ss_pred CCCceecccc----cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcC
Confidence 9999876421 2223346999999999854 4478999999999999999999999997532221111111111
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
..+.... ..+..++.+++.+||+.||++|||+.|+++
T Consensus 274 ~~~~~~~------------------------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 274 PSPQLPA------------------------------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCCCCCG------------------------------GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCc------------------------------ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1110000 012345779999999999999999999987
No 256
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5e-39 Score=344.18 Aligned_cols=271 Identities=21% Similarity=0.315 Sum_probs=186.3
Q ss_pred HhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 556 KATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 556 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
...++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 86 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK-----D 86 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESS-----S
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeec-----C
Confidence 44678999999999999999999998889999999986433 23346788999999999999999999998765 5
Q ss_pred eeeEEEeccCCCCHHHHhhcccccc-cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQ-NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG 713 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 713 (871)
..++||||+++++|.+++....... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 163 (303)
T 2vwi_A 87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA 163 (303)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEE
Confidence 6899999999999999997532111 1123589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCC--ccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh
Q 002883 714 DFGLSRLLHDNSPD--QTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM 790 (871)
Q Consensus 714 Dfg~a~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~ 790 (871)
|||.+......... ........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||............. ..
T Consensus 164 dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~ 242 (303)
T 2vwi_A 164 DFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL-QN 242 (303)
T ss_dssp CCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH-TS
T ss_pred eccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHh-cc
Confidence 99999876532211 112233568999999998765 568999999999999999999999997643322111111 11
Q ss_pred CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
..+.......++. ....+...+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 243 DPPSLETGVQDKE----------------------MLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp SCCCTTC-----C----------------------CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCccccccccch----------------------hhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 1110000000000 00122345778999999999999999999987
No 257
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=345.72 Aligned_cols=277 Identities=20% Similarity=0.231 Sum_probs=203.4
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcC-CCce
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTR-GNEF 635 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~ 635 (871)
++|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++...... ....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 67999999999999999999999899999999996432 23346788999999999999999999998764221 1234
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.|+||||++ ++|.+++.. .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 104 ~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 170 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL---------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 170 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECST
T ss_pred EEEEecccc-CCHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeec
Confidence 599999996 688877743 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC-
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP- 793 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~- 793 (871)
|.+...... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||................+.+
T Consensus 171 g~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~ 244 (353)
T 3coi_A 171 GLARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 244 (353)
T ss_dssp TCTTC--------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCC
T ss_pred ccccCCCCC------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999765322 223468999999998776 678999999999999999999999998644332211111111211
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
......+......... ........+............+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 245 TEFVQKLNDKAAKSYI---QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTTCSCHHHHHHH---HTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHhhHHHHHHH---HhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1121111111111111 111111111112222344567889999999999999999999986
No 258
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=6.4e-39 Score=353.23 Aligned_cols=260 Identities=9% Similarity=0.028 Sum_probs=182.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc---chHHHHHHHHHHHHcC--CCCccceeeeee-------
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR---GASKSFIAECEALRSI--RHRNLVKIITSC------- 625 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~~~~~~------- 625 (871)
..+|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.+++.+ +||||++++..+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 3458999999999999999999998999999999976432 3345677785544444 699988855333
Q ss_pred cccCcC------------CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHH------HHHHHHHHHHHHHHhhc
Q 002883 626 SSIDTR------------GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQR------LSIAIDVANVLEYLHHH 687 (871)
Q Consensus 626 ~~~~~~------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~ 687 (871)
.....+ .....|+||||++ |+|.+++..... .+++..+ ..++.||+.||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~------~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~ 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF------VYVFRGDEGILALHILTAQLIRLAANLQSK 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH------SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc------ccchhhhhhhhhHHHHHHHHHHHHHHHHHC
Confidence 221110 0145799999998 899999987532 2445555 67889999999999999
Q ss_pred CCCCeEecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccC--CCCCCccchhhHHHHHH
Q 002883 688 CHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL--GEVSTHGDEYSFGILML 765 (871)
Q Consensus 688 ~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ 765 (871)
+|+||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++|||||||++|
T Consensus 214 ---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ 284 (371)
T 3q60_A 214 ---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIY 284 (371)
T ss_dssp ---TEEETTCSGGGEEECTTSCEEECCGGGEEETTC------EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHH
T ss_pred ---CCccCcCCHHHEEECCCCCEEEEecceeeecCC------CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHH
Confidence 999999999999999999999999999987542 1213457799999999877 67899999999999999
Q ss_pred HHHhCCCCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCC
Q 002883 766 EMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEEL 845 (871)
Q Consensus 766 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 845 (871)
||++|+.||................. ......... +....+...+.+++.+||+.|
T Consensus 285 elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------------------~~~~~~~~~~~~li~~~L~~d 340 (371)
T 3q60_A 285 RVWCLFLPFGLVTPGIKGSWKRPSLR-VPGTDSLAF-----------------------GSCTPLPDFVKTLIGRFLNFD 340 (371)
T ss_dssp HHHHSSCSTTBCCTTCTTCCCBCCTT-SCCCCSCCC-----------------------TTSSCCCHHHHHHHHHHTCSS
T ss_pred HHHhCCCCCCCcCcccccchhhhhhh-hccccccch-----------------------hhccCCCHHHHHHHHHHcCCC
Confidence 99999999986432211100000000 000000000 000123446779999999999
Q ss_pred CCCCCCHHHHHH
Q 002883 846 PRDRMKIQDAIM 857 (871)
Q Consensus 846 P~~RPta~evl~ 857 (871)
|++|||+.|+++
T Consensus 341 P~~Rpt~~e~l~ 352 (371)
T 3q60_A 341 RRRRLLPLEAME 352 (371)
T ss_dssp TTTCCCHHHHTT
T ss_pred hhhCCCHHHHhc
Confidence 999999999985
No 259
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=6.1e-38 Score=347.45 Aligned_cols=277 Identities=22% Similarity=0.311 Sum_probs=197.1
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-CCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT-RGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~ 636 (871)
..+|++.+.||+|+||+||+|++..+++ ||+|++..... ...+|+++++.++||||+++++++..... ....+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 3579999999999999999999986555 88888753322 22369999999999999999999876543 334567
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC-CCCceEEeec
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD-NEMVAHVGDF 715 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Df 715 (871)
++||||++++ +.+.+..... ....+++..++.++.||+.||+|||+. +|+||||||+||+++ .++.+||+||
T Consensus 114 ~lv~e~~~~~-l~~~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DF 186 (394)
T 4e7w_A 114 NLVLEYVPET-VYRASRHYAK---LKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDF 186 (394)
T ss_dssp EEEEECCSEE-HHHHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred EEEeeccCcc-HHHHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeC
Confidence 8999999764 4444332111 122689999999999999999999999 999999999999998 7999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD 794 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 794 (871)
|+|+....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+.........+.+.
T Consensus 187 G~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~ 262 (394)
T 4e7w_A 187 GSAKILIAGEP----NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPS 262 (394)
T ss_dssp TTCEECCTTCC----CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred CCcccccCCCC----CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99987654322 2235689999999987654 589999999999999999999999986543332222222222221
Q ss_pred h-hhhhcChhHHHHHHHHHhhhhhhcCc-hhHHhH-HHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 795 Q-VAEIIDPAILEEALEIQAGIVKELQP-NLRAKF-HEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 795 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
. ......+.... .......+ .....+ .....++.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 263 REQIKTMNPNYME-------HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHHHHHCGGGSS-------SCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHhhChhhhh-------hccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 1 00000000000 00000000 000000 123457889999999999999999999986
No 260
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=9.2e-38 Score=343.09 Aligned_cols=288 Identities=20% Similarity=0.247 Sum_probs=195.3
Q ss_pred HHHHHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-
Q 002883 552 AELLKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT- 630 (871)
Q Consensus 552 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~- 630 (871)
.......++|++.+.||+|+||+||+|++..+++.||||++..... ......+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 3455667899999999999999999999998999999999854332 23456678888888999999999999866433
Q ss_pred -CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHh--hcCCCCeEecCCCCCceeeCC-
Q 002883 631 -RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLH--HHCHTSIVHCDLKPSNVLLDN- 706 (871)
Q Consensus 631 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlkp~Nill~~- 706 (871)
....+.++||||+++ ++.+.+..... ....+++..+..++.|++.|+.||| +. +|+||||||+||+++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYR---RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 233457899999975 55554443211 1226899999999999999999999 87 9999999999999996
Q ss_pred CCceEEeecccceecCCCCCCccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHH
Q 002883 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLH 785 (871)
Q Consensus 707 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~ 785 (871)
++.+||+|||++....... ......||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 243 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSE----PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHE 243 (360)
T ss_dssp TTEEEECCCTTCBCCCTTS----CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCcEEEeeCCCceecCCCC----CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHH
Confidence 8999999999998765432 12234689999999987654 489999999999999999999999986543322222
Q ss_pred HHhhhCCCch-hhhhcChhHHHHHHHHHhhhhhhcCchhHHhH----HHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 786 KYAKMGLPDQ-VAEIIDPAILEEALEIQAGIVKELQPNLRAKF----HEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 786 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.......+.. .....++...... ............+ .....++.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 244 IVRVLGCPSREVLRKLNPSHTDVD------LYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHCCCCHHHHHHHCTTCCCGG------GGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHcCCCCHHHHHhcccchhhcc------ccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1111111111 1111110000000 0000000000000 123567889999999999999999999986
No 261
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.2e-38 Score=333.26 Aligned_cols=252 Identities=22% Similarity=0.318 Sum_probs=202.2
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 94 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-----S 94 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC-----C
Confidence 3468999999999999999999999899999999996433 23457889999999999999999999998765 6
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC---CceE
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE---MVAH 711 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~k 711 (871)
..++||||+++++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.+ +.+|
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~k 164 (287)
T 2wei_A 95 SFYIVGELYTGGELFDEIIKRK-------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIK 164 (287)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred eEEEEEEccCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEE
Confidence 6899999999999999987643 589999999999999999999999 99999999999999754 4799
Q ss_pred EeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
|+|||.+....... ......|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||........ ........
T Consensus 165 L~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~ 238 (287)
T 2wei_A 165 IIDFGLSTCFQQNT----KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGK 238 (287)
T ss_dssp ECSTTGGGTBCCCS----SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCC
T ss_pred EeccCcceeecCCC----ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCC
Confidence 99999998765332 1223458999999998765 589999999999999999999999975432211 11111111
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
.+... +....+..++.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 239 YAFDL----------------------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCCCS----------------------------GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCc----------------------------hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 11000 001123346779999999999999999999997
No 262
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-38 Score=345.50 Aligned_cols=254 Identities=23% Similarity=0.280 Sum_probs=198.9
Q ss_pred hcCCCCCceeeccccceEEEEEEC---CCCcEEEEEEeeccc----cchHHHHHHHHHHHHcC-CCCccceeeeeecccC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILG---TEETNVAVKVLDLQQ----RGASKSFIAECEALRSI-RHRNLVKIITSCSSID 629 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 629 (871)
.++|++.+.||+|+||+||+|++. .+++.||||+++... ....+.+.+|+++++.+ +||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 131 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE- 131 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET-
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC-
Confidence 468999999999999999999984 478999999985432 22345677899999999 799999999998765
Q ss_pred cCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc
Q 002883 630 TRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV 709 (871)
Q Consensus 630 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 709 (871)
...++||||+++|+|.+++.... .+++..++.++.||+.||.|||+. +|+||||||+||+++.++.
T Consensus 132 ----~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 197 (355)
T 1vzo_A 132 ----TKLHLILDYINGGELFTHLSQRE-------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGH 197 (355)
T ss_dssp ----TEEEEEECCCCSCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSC
T ss_pred ----ceEEEEeecCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCc
Confidence 66899999999999999997643 589999999999999999999999 9999999999999999999
Q ss_pred eEEeecccceecCCCCCCccccccccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhh--hHH
Q 002883 710 AHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL--GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGL--SLH 785 (871)
Q Consensus 710 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~--~~~ 785 (871)
+||+|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ...
T Consensus 198 ~kl~DfG~a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~ 275 (355)
T 1vzo_A 198 VVLTDFGLSKEFVADE--TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275 (355)
T ss_dssp EEESCSSEEEECCGGG--GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH
T ss_pred EEEeeCCCCeecccCC--CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHH
Confidence 9999999998754321 122334579999999999875 3578999999999999999999999974322111 000
Q ss_pred HHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-----CHHHHHHHH
Q 002883 786 KYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-----KIQDAIMEL 859 (871)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----ta~evl~~L 859 (871)
.......+. .+ ..+...+.+++.+||+.||++|| |++|+++..
T Consensus 276 ~~~~~~~~~------------------------~~-------~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 276 RRILKSEPP------------------------YP-------QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHHHHCCCC------------------------CC-------TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HHHhccCCC------------------------CC-------cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 000000000 00 01234567899999999999999 999998754
No 263
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.3e-37 Score=338.85 Aligned_cols=279 Identities=18% Similarity=0.219 Sum_probs=204.7
Q ss_pred hcCCCCCceeeccccceEEEEEE-CCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCC------ccceeeeeecccCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGIL-GTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHR------NLVKIITSCSSIDT 630 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~~~~ 630 (871)
.++|++.+.||+|+||+||+|.+ ..+++.||||+++... ...+.+.+|+++++.++|+ +++++++++...
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~-- 89 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH-- 89 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET--
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC--
Confidence 36899999999999999999998 5578999999996433 3456788999999888655 499999988765
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC----
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---- 706 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---- 706 (871)
...++||||+ +++|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 90 ---~~~~lv~e~~-~~~l~~~l~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 157 (339)
T 1z57_A 90 ---GHICIVFELL-GLSTYDFIKENGFL-----PFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYT 157 (339)
T ss_dssp ---TEEEEEEECC-CCBHHHHHHHTTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEE
T ss_pred ---CcEEEEEcCC-CCCHHHHHHhcCCC-----CCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccc
Confidence 6789999999 89999999765422 589999999999999999999999 9999999999999987
Q ss_pred ---------------CCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCC
Q 002883 707 ---------------EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGK 771 (871)
Q Consensus 707 ---------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~ 771 (871)
++.+||+|||.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 231 (339)
T 1z57_A 158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEH------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF 231 (339)
T ss_dssp EEEC----CEEEEESCCCEEECCCSSCEETTSC------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccCCccccccccccCCCceEeeCcccccCccc------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCC
Confidence 668999999999875432 22346899999999999889999999999999999999999
Q ss_pred CCCchhhhhhhh-HHHHhhhCCCchhhhhcC-hh--------HH--HHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhc
Q 002883 772 RPTDDMFEEGLS-LHKYAKMGLPDQVAEIID-PA--------IL--EEALEIQAGIVKELQPNLRAKFHEIQVSILRVGI 839 (871)
Q Consensus 772 ~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~--------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 839 (871)
.||......... .........+........ .. +. ............... ...........++.+++.
T Consensus 232 ~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~ 310 (339)
T 1z57_A 232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK-EFMLSQDVEHERLFDLIQ 310 (339)
T ss_dssp CSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGG-GGCSCCSHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchh-hhcccchhhHHHHHHHHH
Confidence 999754332211 111111122222111000 00 00 000000000000000 000111234567899999
Q ss_pred ccccCCCCCCCCHHHHHHH
Q 002883 840 LCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 840 ~cl~~dP~~RPta~evl~~ 858 (871)
+||+.||++|||+.|+++.
T Consensus 311 ~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 311 KMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHTCSSTTTSCCHHHHTTS
T ss_pred HHhCcCcccccCHHHHhcC
Confidence 9999999999999999853
No 264
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.2e-37 Score=347.10 Aligned_cols=204 Identities=22% Similarity=0.307 Sum_probs=172.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC--------CCccceeeeeecccC
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR--------HRNLVKIITSCSSID 629 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~~~~ 629 (871)
.++|++.+.||+|+||+||+|++..+++.||||++.... ...+.+.+|+++++.++ |+||+++++++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~- 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS- 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE-
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec-
Confidence 368999999999999999999999899999999996432 34567889999999885 78899999988643
Q ss_pred cCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-
Q 002883 630 TRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM- 708 (871)
Q Consensus 630 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~- 708 (871)
.......|+||||+ ++++.+++..... ..+++..++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNY-----QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhccc-----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccch
Confidence 22336789999999 6677776655432 25899999999999999999999852 899999999999998775
Q ss_pred ------------------------------------------------ceEEeecccceecCCCCCCccccccccccccc
Q 002883 709 ------------------------------------------------VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGY 740 (871)
Q Consensus 709 ------------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y 740 (871)
.+||+|||.|...... .....||+.|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~------~~~~~gt~~y 259 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH------FTEDIQTRQY 259 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC------SCSCCSCGGG
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc------CccCCCCCcc
Confidence 7999999999876432 2234689999
Q ss_pred cCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchh
Q 002883 741 VAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM 777 (871)
Q Consensus 741 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 777 (871)
+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 260 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred cCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 9999999889999999999999999999999999753
No 265
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.7e-38 Score=343.00 Aligned_cols=265 Identities=18% Similarity=0.256 Sum_probs=203.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccch-----------------HHHHHHHHHHHHcCCCCccce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGA-----------------SKSFIAECEALRSIRHRNLVK 620 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~ 620 (871)
.++|++.+.||+|+||.||+|++ +++.||||++....... .+.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999999999 89999999996432211 178899999999999999999
Q ss_pred eeeeecccCcCCCceeeEEEeccCCCCHHHH------hhcccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeE
Q 002883 621 IITSCSSIDTRGNEFKALVYEFMPNGSLENW------LNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH-HCHTSIV 693 (871)
Q Consensus 621 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iv 693 (871)
+++++.+. ...++||||+++++|.++ +.... ...+++..++.++.|++.||.|||+ . +|+
T Consensus 108 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~ 174 (348)
T 2pml_X 108 CEGIITNY-----DEVYIIYEYMENDSILKFDEYFFVLDKNY-----TCFIPIQVIKCIIKSVLNSFSYIHNEK---NIC 174 (348)
T ss_dssp CSEEEESS-----SEEEEEEECCTTCBSSEESSSEESSCSSS-----CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEE
T ss_pred EEEEEeeC-----CeEEEEEeccCCCcHHHHHHHhhhhhhcc-----ccCCCHHHHHHHHHHHHHHHHHHhccC---CEe
Confidence 99998765 678999999999999998 44321 2369999999999999999999999 8 999
Q ss_pred ecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCC-CCCC-ccchhhHHHHHHHHHhCC
Q 002883 694 HCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVST-HGDEYSFGILMLEMFTGK 771 (871)
Q Consensus 694 H~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DiwSlG~il~elltG~ 771 (871)
||||||+||+++.++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++||||+||++|+|++|+
T Consensus 175 H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~ 249 (348)
T 2pml_X 175 HRDVKPSNILMDKNGRVKLSDFGESEYMVDK-----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249 (348)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCEECBTT-----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSS
T ss_pred ecCCChHhEEEcCCCcEEEeccccccccccc-----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999876432 23345689999999998877 6666 999999999999999999
Q ss_pred CCCchhhhhhhhHHHHhhhC--CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCC
Q 002883 772 RPTDDMFEEGLSLHKYAKMG--LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDR 849 (871)
Q Consensus 772 ~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 849 (871)
.||................. .+.....+..+.. ..........+...+.+++.+||+.||++|
T Consensus 250 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 314 (348)
T 2pml_X 250 VPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLT---------------NKKSTCSNNFLSNEDIDFLKLFLRKNPAER 314 (348)
T ss_dssp CSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTC---------------C--------CCCHHHHHHHHHHCCSSGGGS
T ss_pred CCCCCCCcHHHHHHHHhccCcCCccchhhhhcccc---------------ccccccchhhcCHHHHHHHHHHccCChhhC
Confidence 99986433222222221111 1111000000000 000001112344567899999999999999
Q ss_pred CCHHHHHH
Q 002883 850 MKIQDAIM 857 (871)
Q Consensus 850 Pta~evl~ 857 (871)
||+.|+++
T Consensus 315 ps~~e~l~ 322 (348)
T 2pml_X 315 ITSEDALK 322 (348)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhc
Confidence 99999987
No 266
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2e-37 Score=331.63 Aligned_cols=258 Identities=21% Similarity=0.326 Sum_probs=195.7
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-------
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT------- 630 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 630 (871)
.++|++.+.||+|+||.||+|++..+++.||||++.... ...+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 457999999999999999999999899999999996432 345778899999999999999999998865321
Q ss_pred -CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc
Q 002883 631 -RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV 709 (871)
Q Consensus 631 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 709 (871)
......|+||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENL------NQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCG------GGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred cccCCceEEEEecCCCCCHHHhhhcccc------ccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 224678999999999999999976432 478899999999999999999999 9999999999999999999
Q ss_pred eEEeecccceecCCCCC-----------CccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchh
Q 002883 710 AHVGDFGLSRLLHDNSP-----------DQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDM 777 (871)
Q Consensus 710 ~kl~Dfg~a~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~ 777 (871)
+||+|||.+........ .........||+.|+|||++.+. .++.++||||+||++|+|++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 99999999987643210 01122345689999999987754 78999999999999999998 56533
Q ss_pred hhhhhhHHHHhhh--CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHH
Q 002883 778 FEEGLSLHKYAKM--GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDA 855 (871)
Q Consensus 778 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~ev 855 (871)
............. ..+... . ......+.+++.+||+.||++|||+.|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~----~--------------------------~~~~~~~~~li~~~l~~dp~~Rps~~~l 281 (303)
T 1zy4_A 232 MERVNILKKLRSVSIEFPPDF----D--------------------------DNKMKVEKKIIRLLIDHDPNKRPGARTL 281 (303)
T ss_dssp HHHHHHHHHHHSTTCCCCTTC----C--------------------------TTTSHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred hhHHHHHHhccccccccCccc----c--------------------------ccchHHHHHHHHHHHhcCcccCcCHHHH
Confidence 2222111111111 011110 0 0223456789999999999999999999
Q ss_pred HHH
Q 002883 856 IME 858 (871)
Q Consensus 856 l~~ 858 (871)
++.
T Consensus 282 l~h 284 (303)
T 1zy4_A 282 LNS 284 (303)
T ss_dssp HHS
T ss_pred hCC
Confidence 873
No 267
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.1e-37 Score=365.80 Aligned_cols=261 Identities=23% Similarity=0.358 Sum_probs=205.2
Q ss_pred hhcCCCCCceeeccccceEEEEEECCC---CcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTE---ETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 632 (871)
..++|++.+.||+|+||.||+|++..+ +..||+|+++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----- 462 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----- 462 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 346789999999999999999998543 4679999986433 3344678999999999999999999998743
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
+..|+||||+++|+|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 463 -~~~~lv~E~~~~g~L~~~l~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL 532 (656)
T 2j0j_A 463 -NPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKL 532 (656)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHTTT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEE
T ss_pred -CceEEEEEcCCCCcHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEE
Confidence 347899999999999999976432 489999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~ 791 (871)
+|||++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||........ ........
T Consensus 533 ~DFG~a~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~-~~~i~~~~ 609 (656)
T 2j0j_A 533 GDFGLSRYMEDST--YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-IGRIENGE 609 (656)
T ss_dssp CCCCCCCSCCC------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-HHHHHHTC
T ss_pred EecCCCeecCCCc--ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHcCC
Confidence 9999998765432 112223456789999999988899999999999999999997 9999975432221 11111110
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR 866 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~ 866 (871)
.... + ..++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 610 -~~~~-----------------------~-------~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 610 -RLPM-----------------------P-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp -CCCC-----------------------C-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CCCC-----------------------C-------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 0000 0 022345778999999999999999999999999987654
No 268
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=7.6e-38 Score=339.35 Aligned_cols=258 Identities=20% Similarity=0.291 Sum_probs=176.2
Q ss_pred hcCCCCCc-eeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSAN-LIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
.++|.+.+ .||+|+||+||+|++..+++.||||++.... ....+....++.++||||+++++++... ..+....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENM-HHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhc-cCCCceE
Confidence 46788855 6999999999999999999999999986432 2222233345667999999999998653 2234668
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC---CCceEEe
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EMVAHVG 713 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~ 713 (871)
++||||+++|+|.+++...... .+++.+++.++.|++.||.|||+. +|+||||||+||+++. ++.+||+
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~-----~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQ-----AFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEeccCCCCHHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 9999999999999999875432 589999999999999999999999 9999999999999976 4559999
Q ss_pred ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883 714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP 793 (871)
Q Consensus 714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~ 793 (871)
|||.+...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||................ .
T Consensus 174 Dfg~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~ 246 (336)
T 3fhr_A 174 DFGFAKETTQN-----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI--R 246 (336)
T ss_dssp CCTTCEEC---------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------
T ss_pred ccccceecccc-----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhh--h
Confidence 99999875432 1223468999999999988889999999999999999999999997543321110000000 0
Q ss_pred chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
....... .+....+..++.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~-----------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 247 LGQYGFP-----------------------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ----CCC-----------------------TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ccccccC-----------------------chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000 00011234567799999999999999999999973
No 269
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=340.87 Aligned_cols=263 Identities=23% Similarity=0.322 Sum_probs=197.4
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE 634 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 634 (871)
..++|++.+.||+|+||.||+|++.. .||+|+++... ....+.+.+|+.++++++||||+++++++.+. .
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~ 102 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP-----P 102 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS-----S
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC-----C
Confidence 45789999999999999999999863 49999986432 22335677899999999999999999998765 5
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++ ++.+||+|
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~D 172 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDAKI------VLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITD 172 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSSCC------CCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECC
T ss_pred ceEEEeecccCCcHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEee
Confidence 68999999999999999976432 589999999999999999999999 999999999999998 67999999
Q ss_pred cccceecCCCCC--CccccccccccccccCcccccC---------CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhh
Q 002883 715 FGLSRLLHDNSP--DQTSTSRVKGSIGYVAPEYGAL---------GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLS 783 (871)
Q Consensus 715 fg~a~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~ 783 (871)
||++........ .........|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.........
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 252 (319)
T 2y4i_B 173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII 252 (319)
T ss_dssp CSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH
T ss_pred cCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999876542211 1122233458999999998753 45789999999999999999999999854333211
Q ss_pred HHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHH
Q 002883 784 LHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQ 863 (871)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~ 863 (871)
. .......+..... .+..++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 253 ~-~~~~~~~~~~~~~------------------------------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 253 W-QMGTGMKPNLSQI------------------------------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp H-HHHTTCCCCCCCS------------------------------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred H-HhccCCCCCCCcC------------------------------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 1 1111100100000 11234678999999999999999999999999887
Q ss_pred HHHHh
Q 002883 864 KMRQA 868 (871)
Q Consensus 864 ~~~~~ 868 (871)
+..++
T Consensus 302 ~~~~~ 306 (319)
T 2y4i_B 302 KRNRR 306 (319)
T ss_dssp -----
T ss_pred Hhhcc
Confidence 65543
No 270
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.9e-37 Score=333.33 Aligned_cols=253 Identities=21% Similarity=0.363 Sum_probs=193.3
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCC--CCccceeeeeecccCcCC
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIR--HRNLVKIITSCSSIDTRG 632 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~ 632 (871)
..++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++ ||||+++++++...
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~---- 100 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD---- 100 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS----
T ss_pred ccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC----
Confidence 3567999999999999999999986 58899999996443 334577899999999996 59999999998765
Q ss_pred CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883 633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV 712 (871)
Q Consensus 633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 712 (871)
...++||| +.+++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||++++ +.+||
T Consensus 101 -~~~~lv~e-~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL 167 (313)
T 3cek_A 101 -QYIYMVME-CGNIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKL 167 (313)
T ss_dssp -SEEEEEEC-CCSEEHHHHHHHCS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEE
T ss_pred -CEEEEEEe-cCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEE
Confidence 66899999 55889999998643 589999999999999999999999 9999999999999964 89999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCchhhhhh
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-----------GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG 781 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~ 781 (871)
+|||.+........ ........||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.......
T Consensus 168 ~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (313)
T 3cek_A 168 IDFGIANQMQPDTT-SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246 (313)
T ss_dssp CCCSSSCC---------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH
T ss_pred eeccccccccCccc-cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH
Confidence 99999987654321 112234568999999998764 478899999999999999999999997543222
Q ss_pred hhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 782 LSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
................. ....++.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~------------------------------~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 247 SKLHAIIDPNHEIEFPD------------------------------IPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHHHHHCTTSCCCCCC------------------------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHhcccccCCcc------------------------------cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11111111110000000 012356789999999999999999999874
No 271
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.8e-37 Score=336.08 Aligned_cols=277 Identities=17% Similarity=0.233 Sum_probs=201.9
Q ss_pred hcCCCCCceeeccccceEEEEEECCCC-cEEEEEEeeccccchHHHHHHHHHHHHcCCCCc------cceeeeeecccCc
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEE-TNVAVKVLDLQQRGASKSFIAECEALRSIRHRN------LVKIITSCSSIDT 630 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 630 (871)
.++|++.+.||+|+||+||+|++..++ +.||+|+++... ...+.+.+|+++++.++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~-- 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH-- 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET--
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC--
Confidence 468999999999999999999997766 789999996432 34567888999999987655 88888887665
Q ss_pred CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee------
Q 002883 631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL------ 704 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill------ 704 (871)
...++||||+ ++++.+++..... ..+++.+++.++.||+.||+|||+. +|+||||||+||++
T Consensus 95 ---~~~~lv~e~~-~~~l~~~l~~~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~ 162 (355)
T 2eu9_A 95 ---GHMCIAFELL-GKNTFEFLKENNF-----QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFE 162 (355)
T ss_dssp ---TEEEEEEECC-CCBHHHHHHHTTT-----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEE
T ss_pred ---CeEEEEEecc-CCChHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccc
Confidence 6789999999 6778777765432 2589999999999999999999999 99999999999999
Q ss_pred -------------CCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCC
Q 002883 705 -------------DNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGK 771 (871)
Q Consensus 705 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~ 771 (871)
+.++.+||+|||.+...... .....||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 236 (355)
T 2eu9_A 163 TLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 236 (355)
T ss_dssp EEECCC-CCCEEEESCCCEEECCCTTCEETTSC------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccccccccCCCcEEEeecCcccccccc------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCC
Confidence 56789999999999875432 22346899999999999999999999999999999999999
Q ss_pred CCCchhhhhhhhH-HHHhhhCCCchhhhhcC------------hhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhh
Q 002883 772 RPTDDMFEEGLSL-HKYAKMGLPDQVAEIID------------PAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVG 838 (871)
Q Consensus 772 ~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 838 (871)
.||.......... ........|........ +...... ......+..... ..........++.+++
T Consensus 237 ~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~li 314 (355)
T 2eu9_A 237 TLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDG-RYVKENCKPLKS-YMLQDSLEHVQLFDLM 314 (355)
T ss_dssp CSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHH-HHHHHHCCCGGG-GCSCCSHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchh-ccccccCCcccc-cccccchhHHHHHHHH
Confidence 9998643332111 11111122222111000 0000000 000000000000 0011123355788999
Q ss_pred cccccCCCCCCCCHHHHHH
Q 002883 839 ILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 839 ~~cl~~dP~~RPta~evl~ 857 (871)
.+||+.||++|||+.|+++
T Consensus 315 ~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 315 RRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHTCSSTTTSCCHHHHTT
T ss_pred HHHhcCChhhCcCHHHHhc
Confidence 9999999999999999985
No 272
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.9e-37 Score=342.37 Aligned_cols=281 Identities=17% Similarity=0.227 Sum_probs=202.5
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-----------CCccceeeeeec
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-----------HRNLVKIITSCS 626 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 626 (871)
.++|++.+.||+|+||+||+|++..+++.||||++.... ...+.+.+|+++++++. ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 368999999999999999999999899999999996432 24567888999998875 899999999987
Q ss_pred ccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC-
Q 002883 627 SIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD- 705 (871)
Q Consensus 627 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~- 705 (871)
.. .......++||||+ +++|.+++...... .+++..++.++.||+.||+|||+++ +|+||||||+||+++
T Consensus 97 ~~-~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 97 HK-GPNGVHVVMVFEVL-GENLLALIKKYEHR-----GIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEI 167 (373)
T ss_dssp EE-ETTEEEEEEEECCC-CEEHHHHHHHTTTS-----CCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEE
T ss_pred cc-CCCCceEEEEEecC-CCCHHHHHHHhhcc-----CCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEec
Confidence 64 22335789999999 99999999875422 5899999999999999999999942 899999999999994
Q ss_pred -----CCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhh
Q 002883 706 -----NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEE 780 (871)
Q Consensus 706 -----~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 780 (871)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 241 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDEH------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTBC------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC------
T ss_pred cCCCcCcceEEEcccccccccCCC------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccc
Confidence 4458999999999876432 22346899999999999999999999999999999999999999854321
Q ss_pred -----hhhHHHHhh--hCCCchhhhhcChhHHHHHHHHHhhhhhhcC-----------chhHHhHHHHHHHHHhhhcccc
Q 002883 781 -----GLSLHKYAK--MGLPDQVAEIIDPAILEEALEIQAGIVKELQ-----------PNLRAKFHEIQVSILRVGILCS 842 (871)
Q Consensus 781 -----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~li~~cl 842 (871)
......... ...|.....-.. ....+.. ..+...... ............++.+++.+||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 318 (373)
T 1q8y_A 242 SYTKDDDHIAQIIELLGELPSYLLRNGK--YTRTFFN-SRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML 318 (373)
T ss_dssp ---CHHHHHHHHHHHHCSCCHHHHHHCT--THHHHBC-C--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGG
T ss_pred ccCChHHHHHHHHHhcCCCCHHHHhccc--hhhhhcC-CcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHh
Confidence 111111111 111111100000 0000000 000000000 0000011355678899999999
Q ss_pred cCCCCCCCCHHHHHH
Q 002883 843 EELPRDRMKIQDAIM 857 (871)
Q Consensus 843 ~~dP~~RPta~evl~ 857 (871)
+.||++|||++|+++
T Consensus 319 ~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 319 QLDPRKRADAGGLVN 333 (373)
T ss_dssp CSSTTTCBCHHHHHT
T ss_pred ccCccccCCHHHHhh
Confidence 999999999999986
No 273
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5.1e-38 Score=338.52 Aligned_cols=242 Identities=21% Similarity=0.312 Sum_probs=198.1
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccc------hHHHHHHHHHHHHcCC--CCccceeeeeeccc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRG------ASKSFIAECEALRSIR--HRNLVKIITSCSSI 628 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~ 628 (871)
..++|++.+.||+|+||.||+|++..+++.||||++...... ....+.+|+.++++++ |+||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 456899999999999999999999989999999999654321 2245677999999995 59999999998765
Q ss_pred CcCCCceeeEEEeccCC-CCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC-C
Q 002883 629 DTRGNEFKALVYEFMPN-GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD-N 706 (871)
Q Consensus 629 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~ 706 (871)
...++|||++.+ ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++ .
T Consensus 121 -----~~~~lv~e~~~~~~~L~~~l~~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 185 (320)
T 3a99_A 121 -----DSFVLILERPEPVQDLFDFITERG-------ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLN 185 (320)
T ss_dssp -----SEEEEEEECCSSEEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETT
T ss_pred -----CcEEEEEEcCCCCccHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCC
Confidence 668999999976 89999997643 589999999999999999999999 999999999999998 7
Q ss_pred CCceEEeecccceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHH
Q 002883 707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLH 785 (871)
Q Consensus 707 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~ 785 (871)
++.+||+|||.+...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 186 ~~~~kL~Dfg~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----- 255 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI----- 255 (320)
T ss_dssp TTEEEECCCTTCEECCSS-----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-----
T ss_pred CCCEEEeeCccccccccc-----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh-----
Confidence 899999999999876532 1223468999999998877666 68899999999999999999999753211
Q ss_pred HHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 786 KYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...... ... .+..++.+++.+||+.||++|||++|+++
T Consensus 256 --~~~~~~------~~~--------------------------~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 256 --IRGQVF------FRQ--------------------------RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp --HHCCCC------CSS--------------------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --hccccc------ccc--------------------------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000 000 12235678999999999999999999987
No 274
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.1e-37 Score=335.30 Aligned_cols=260 Identities=23% Similarity=0.277 Sum_probs=178.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHH-HHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR-GASKSFIAECE-ALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||.||+|.+..+++.||||+++.... .....+.+|+. +++.++||||+++++++... +.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~-----~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE-----GD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS-----SE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC-----Cc
Confidence 4689999999999999999999998999999999965432 23345556666 66778999999999998765 66
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.++||||+++ +|.+++...... ....+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+||
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Df 170 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYSV--LDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDF 170 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHT--TCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCC
T ss_pred eEEEEeecCC-ChHHHHHHHHhh--hcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccC
Confidence 8999999975 888887642211 122689999999999999999999985 28999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccc----cCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYG----ALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
|.+....... ......||+.|+|||++ .+..++.++|||||||++|+|++|+.||.................
T Consensus 171 g~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 246 (327)
T 3aln_A 171 GISGQLVDSI----AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGD 246 (327)
T ss_dssp SSSCC----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSC
T ss_pred CCceeccccc----ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCC
Confidence 9998764321 12234689999999987 466789999999999999999999999975322111111000000
Q ss_pred CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
+...... ....+...+.+++.+||+.||++|||+.|+++.
T Consensus 247 -~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 247 -PPQLSNS--------------------------EEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CCCCCCC--------------------------SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -CCCCCCc--------------------------ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0000000 000123457799999999999999999999874
No 275
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=334.58 Aligned_cols=243 Identities=23% Similarity=0.342 Sum_probs=191.7
Q ss_pred HhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccc------hHHHHHHHHHHHHcC----CCCccceeeeee
Q 002883 556 KATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRG------ASKSFIAECEALRSI----RHRNLVKIITSC 625 (871)
Q Consensus 556 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~~~~~~ 625 (871)
...++|++.+.||+|+||.||+|++..+++.||||+++..... ....+.+|+.+++++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3457899999999999999999999889999999999644321 223456789999888 899999999998
Q ss_pred cccCcCCCceeeEEEec-cCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee
Q 002883 626 SSIDTRGNEFKALVYEF-MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLL 704 (871)
Q Consensus 626 ~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill 704 (871)
... ...++|||+ +.+++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 108 ~~~-----~~~~~v~e~~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 172 (312)
T 2iwi_A 108 ETQ-----EGFMLVLERPLPAQDLFDYITEKG-------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILI 172 (312)
T ss_dssp ----------CEEEEECCSSEEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEE
T ss_pred ecC-----CeEEEEEEecCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEE
Confidence 665 567999999 78999999997643 589999999999999999999999 99999999999999
Q ss_pred C-CCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCC-CccchhhHHHHHHHHHhCCCCCchhhhhhh
Q 002883 705 D-NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVS-THGDEYSFGILMLEMFTGKRPTDDMFEEGL 782 (871)
Q Consensus 705 ~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltG~~pf~~~~~~~~ 782 (871)
+ .++.+||+|||.+....... .....|+..|+|||++.+..+. .++||||+||++|+|++|+.||......
T Consensus 173 ~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-- 245 (312)
T 2iwi_A 173 DLRRGCAKLIDFGSGALLHDEP-----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI-- 245 (312)
T ss_dssp ETTTTEEEECCCSSCEECCSSC-----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--
T ss_pred eCCCCeEEEEEcchhhhcccCc-----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH--
Confidence 8 88999999999998765422 2334689999999988776664 5899999999999999999999753211
Q ss_pred hHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 783 SLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...... . + ..+...+.+++.+||+.||++|||++|+++
T Consensus 246 -----~~~~~~--~-----------------------~-------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 246 -----LEAELH--F-----------------------P-------AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -----HHTCCC--C-----------------------C-------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -----hhhccC--C-----------------------c-------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000 0 0 012235678999999999999999999987
No 276
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=6.2e-37 Score=343.70 Aligned_cols=257 Identities=20% Similarity=0.262 Sum_probs=184.3
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCCceee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
+.|.+.+.||+|+||+||.+.. .+++.||||++.... .+.+.+|+++++++ +||||+++++++.+. ...|
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~-----~~~~ 85 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTD-----RFLY 85 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECS-----SEEE
T ss_pred heeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecC-----CeEE
Confidence 3456678899999999987654 378999999986432 35678899999876 899999999987654 6789
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC----------
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE---------- 707 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~---------- 707 (871)
+||||++ |+|.+++.............++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccC
Confidence 9999995 699999987543211111123445678999999999999999 99999999999999754
Q ss_pred ---CceEEeecccceecCCCCCC-ccccccccccccccCcccccC-------CCCCCccchhhHHHHHHHHHh-CCCCCc
Q 002883 708 ---MVAHVGDFGLSRLLHDNSPD-QTSTSRVKGSIGYVAPEYGAL-------GEVSTHGDEYSFGILMLEMFT-GKRPTD 775 (871)
Q Consensus 708 ---~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~ellt-G~~pf~ 775 (871)
+.+||+|||+|......... ........||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 241 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence 48999999999987643211 112234579999999998765 678999999999999999999 999997
Q ss_pred hhhhhhhhHHHHhhhCCC-chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHH
Q 002883 776 DMFEEGLSLHKYAKMGLP-DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQD 854 (871)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~e 854 (871)
........ ....... +...... ...+..++.+++.+||+.||++|||+.|
T Consensus 242 ~~~~~~~~---i~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~~L~~dP~~Rps~~e 292 (434)
T 2rio_A 242 DKYSRESN---IIRGIFSLDEMKCLH--------------------------DRSLIAEATDLISQMIDHDPLKRPTAMK 292 (434)
T ss_dssp STTTHHHH---HHHTCCCCCCCTTCC--------------------------CHHHHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CchhhHHH---HhcCCCCcccccccc--------------------------cccchHHHHHHHHHHhhCChhhCCCHHH
Confidence 54322211 1111100 0000000 0134456789999999999999999999
Q ss_pred HHH
Q 002883 855 AIM 857 (871)
Q Consensus 855 vl~ 857 (871)
+++
T Consensus 293 il~ 295 (434)
T 2rio_A 293 VLR 295 (434)
T ss_dssp HHT
T ss_pred HHh
Confidence 986
No 277
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=5.1e-36 Score=332.71 Aligned_cols=338 Identities=21% Similarity=0.240 Sum_probs=245.5
Q ss_pred cCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCC
Q 002883 109 ISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGND 188 (871)
Q Consensus 109 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~ 188 (871)
+.+++.|++++|.+. .+|...+..+++|++|+|++|.+++ ..+..|..+++|++|++++|+++.+++
T Consensus 44 l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~----------~~~~~~~~l~~L~~L~L~~n~l~~~~~-- 110 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE----------IDTYAFAYAHTIQKLYMGFNAIRYLPP-- 110 (390)
T ss_dssp GCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCE----------ECTTTTTTCTTCCEEECCSSCCCCCCT--
T ss_pred cCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccc----------cChhhccCCCCcCEEECCCCCCCcCCH--
Confidence 456666666666665 5666655567777777777777762 112346677777777777777776543
Q ss_pred ccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccc
Q 002883 189 LRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSV 268 (871)
Q Consensus 189 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 268 (871)
..+..+++|++|+|++|.++ .+|..++.-.++|++|++++|++++..+..|..+++|+.|++++|.+++. .+
T Consensus 111 ----~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~ 182 (390)
T 3o6n_A 111 ----HVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DL 182 (390)
T ss_dssp ----TTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CG
T ss_pred ----HHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---cc
Confidence 34566777888888888887 44554433235688888888888877777788888888888888888754 35
Q ss_pred cCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcE
Q 002883 269 GYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVL 348 (871)
Q Consensus 269 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 348 (871)
..+++|+.|++++|.+++ +...++|++|++++|.+... |..+ .++|+.|++++|.+++. ..+..+++|++
T Consensus 183 ~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 252 (390)
T 3o6n_A 183 SLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVE 252 (390)
T ss_dssp GGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred ccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-cccc--cccccEEECCCCCCccc--HHHcCCCCccE
Confidence 667888888888888773 23345788888888888744 4322 47888888888888743 56778888888
Q ss_pred EeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcC
Q 002883 349 LDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNF 428 (871)
Q Consensus 349 L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 428 (871)
|++++|.+++..|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|++++ .|..+..+++|+.|++++|++
T Consensus 253 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i 330 (390)
T 3o6n_A 253 VDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSI 330 (390)
T ss_dssp EECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCC
T ss_pred EECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCcc
Confidence 888888888777888888888888888888888 456666778888888888888884 455577788888888888888
Q ss_pred CCCCcccccccccccEEecCCCcCcccCCCCcccccccceeccCCCCCccCCCcc
Q 002883 429 SGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 429 ~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
++. + +..+++|+.|++++|+++|.+.. ..+..+....+.+++..|.++...
T Consensus 331 ~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~~ 381 (390)
T 3o6n_A 331 VTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQL 381 (390)
T ss_dssp CCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTTCEE
T ss_pred cee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecccccc
Confidence 854 3 66778888999999998886532 234555556667788888865443
No 278
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.2e-37 Score=329.81 Aligned_cols=253 Identities=21% Similarity=0.270 Sum_probs=180.4
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccc--hHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRG--ASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.++..+++.++||||+++++++... ..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~-----~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN-----TD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----SE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC-----Cc
Confidence 46799999999999999999999989999999999654322 223344555577888999999999998765 67
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeEecCCCCCceeeCCCCceEEee
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH-HCHTSIVHCDLKPSNVLLDNEMVAHVGD 714 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~D 714 (871)
.++||||+ ++.+..+..... ..+++..++.++.|++.||.|||+ . +|+||||||+||+++.++.+||+|
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~d 168 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQ------GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCD 168 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECC
T ss_pred EEEEEecc-CCcHHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEE
Confidence 89999999 556666554322 258999999999999999999998 6 899999999999999999999999
Q ss_pred cccceecCCCCCCccccccccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhh
Q 002883 715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA-----LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAK 789 (871)
Q Consensus 715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~ 789 (871)
||.+....... ......||+.|+|||++. ...++.++|||||||++|+|++|+.||...............
T Consensus 169 fg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 244 (318)
T 2dyl_A 169 FGISGRLVDDK----AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244 (318)
T ss_dssp CTTC------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH
T ss_pred CCCchhccCCc----cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc
Confidence 99997664322 122346899999999874 567889999999999999999999999753222222221111
Q ss_pred hCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 790 MGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
.. +..... ...+..++.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~-~~~~~~----------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 245 EE-PPLLPG----------------------------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp SC-CCCCCS----------------------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cC-CCCCCc----------------------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11 100000 00123457789999999999999999999873
No 279
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.2e-37 Score=341.43 Aligned_cols=251 Identities=21% Similarity=0.288 Sum_probs=183.2
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCCcee
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
..+|.+.+.||+|+||+||.... .+++.||||++..... ..+.+|+++++.+ +||||+++++++.+. ...
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~-----~~~ 93 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDR-----QFQ 93 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEET-----TEE
T ss_pred cEEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecC-----CEE
Confidence 35688999999999999664333 3789999999864432 2356799999999 899999999988665 678
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-----CCceE
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN-----EMVAH 711 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-----~~~~k 711 (871)
|+||||++ |+|.+++..... ...+..++.++.||+.||+|||+. +|+||||||+||+++. ...+|
T Consensus 94 ~lv~E~~~-g~L~~~l~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~k 163 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQKDF------AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAM 163 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSSC------CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEE
T ss_pred EEEEECCC-CCHHHHHHhcCC------CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEE
Confidence 99999995 699999976542 244556778999999999999999 9999999999999953 23578
Q ss_pred EeecccceecCCCCCCccccccccccccccCccccc---CCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHH
Q 002883 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA---LGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKY 787 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~ 787 (871)
|+|||+|+................||+.|+|||++. ...++.++||||+||++|||++ |..||.......... .
T Consensus 164 L~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~--~ 241 (432)
T 3p23_A 164 ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI--L 241 (432)
T ss_dssp ECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH--H
T ss_pred EecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH--H
Confidence 999999987754432223334467999999999987 4567889999999999999999 999997532221111 0
Q ss_pred hhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883 788 AKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM 857 (871)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~ 857 (871)
...... ....+. ......+.+++.+||+.||++|||+.|+++
T Consensus 242 -~~~~~~---~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 242 -LGACSL---DCLHPE------------------------KHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -TTCCCC---TTSCTT------------------------CHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -hccCCc---cccCcc------------------------ccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 000000 000000 012334678999999999999999999984
No 280
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.7e-37 Score=352.64 Aligned_cols=287 Identities=21% Similarity=0.283 Sum_probs=204.3
Q ss_pred hhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc-ccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-CCCc
Q 002883 557 ATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ-QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT-RGNE 634 (871)
Q Consensus 557 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 634 (871)
..++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|++++++++||||+++++++..... ....
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 347899999999999999999999989999999998653 33345678999999999999999999999765322 2246
Q ss_pred eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc---eE
Q 002883 635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV---AH 711 (871)
Q Consensus 635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~k 711 (871)
..|+||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +|
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~----~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vK 164 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFEN----CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHK 164 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSC----TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEE
T ss_pred eEEEEEEeCCCCCHHHHHHhccc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEE
Confidence 77999999999999999986542 12488899999999999999999999 9999999999999987664 99
Q ss_pred EeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883 712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG 791 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~ 791 (871)
|+|||.+....... ......||+.|+|||.+.+..++.++||||+||++|+|++|+.||........ +....
T Consensus 165 L~DFG~a~~~~~~~----~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~----~~~~i 236 (676)
T 3qa8_A 165 IIDLGYAKELDQGE----LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ----WHGKV 236 (676)
T ss_dssp ECSCCCCCBTTSCC----CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHH----SSTTC
T ss_pred Eccccccccccccc----ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhh----hhhhh
Confidence 99999998765432 22335689999999999999999999999999999999999999975322110 00000
Q ss_pred CCchhhh-hcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHH-----HHHHHHHHHH
Q 002883 792 LPDQVAE-IIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQD-----AIMELQEAQK 864 (871)
Q Consensus 792 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~e-----vl~~L~~i~~ 864 (871)
....... .......... ......+............+.+++.+||+.||++|||+.| +.+.++++.+
T Consensus 237 ~~~~~~~~~~~~~l~g~~------~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 237 REKSNEHIVVYDDLTGAV------KFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp C------CCSCCCCSSSC------CCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hcccchhhhhhhhhcccc------ccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 0000000 0000000000 0000000001111234567889999999999999999988 4555555543
No 281
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-35 Score=329.57 Aligned_cols=310 Identities=17% Similarity=0.131 Sum_probs=199.5
Q ss_pred CCCCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccc
Q 002883 13 CSELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQ 92 (871)
Q Consensus 13 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 92 (871)
+++++.|++++|.++...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 34555555555555533333345555555555555555544444555555555555555555544444455555555555
Q ss_pred cccccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCccc
Q 002883 93 VSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLI 172 (871)
Q Consensus 93 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~ 172 (871)
+++|+++ .+|..++..+++|++|++++|.+++ ..|+.+..+++|+
T Consensus 124 L~~n~l~-------------------------~l~~~~~~~l~~L~~L~L~~n~l~~----------~~~~~~~~l~~L~ 168 (390)
T 3o6n_A 124 LERNDLS-------------------------SLPRGIFHNTPKLTTLSMSNNNLER----------IEDDTFQATTSLQ 168 (390)
T ss_dssp CCSSCCC-------------------------CCCTTTTTTCTTCCEEECCSSCCCB----------CCTTTTSSCTTCC
T ss_pred CCCCccC-------------------------cCCHHHhcCCCCCcEEECCCCccCc----------cChhhccCCCCCC
Confidence 5555554 4444444455556666666665542 1123355566666
Q ss_pred EEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccce
Q 002883 173 RLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLIL 252 (871)
Q Consensus 173 ~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 252 (871)
+|++++|+++.++ +..+++|+.|++++|.+++. + ...+|++|++++|.++.. |.. ..++|+.
T Consensus 169 ~L~l~~n~l~~~~---------~~~l~~L~~L~l~~n~l~~~-~-----~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~ 230 (390)
T 3o6n_A 169 NLQLSSNRLTHVD---------LSLIPSLFHANVSYNLLSTL-A-----IPIAVEELDASHNSINVV-RGP--VNVELTI 230 (390)
T ss_dssp EEECCSSCCSBCC---------GGGCTTCSEEECCSSCCSEE-E-----CCSSCSEEECCSSCCCEE-ECC--CCSSCCE
T ss_pred EEECCCCcCCccc---------cccccccceeeccccccccc-C-----CCCcceEEECCCCeeeec-ccc--ccccccE
Confidence 6666666665432 34456677777777766632 1 123577777777777644 322 2467888
Q ss_pred eecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcC
Q 002883 253 IAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNL 332 (871)
Q Consensus 253 L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 332 (871)
|++++|.+++. ..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|++
T Consensus 231 L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l 307 (390)
T 3o6n_A 231 LKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 307 (390)
T ss_dssp EECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCC
T ss_pred EECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcc
Confidence 88888888743 567888888888888888887778888888888888888888884 566677788888899988888
Q ss_pred CCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCC
Q 002883 333 SGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSG 382 (871)
Q Consensus 333 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 382 (871)
+ .+|..+..+++|+.|++++|.++.. + +..+++|+.|++++|+++.
T Consensus 308 ~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 308 L-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp C-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred e-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 8 5677778888899999999988743 3 6778889999999998874
No 282
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.8e-36 Score=318.55 Aligned_cols=235 Identities=11% Similarity=0.056 Sum_probs=184.0
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc---chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.++++++||||+++++++... +.
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-----~~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR-----AG 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC-----Cc
Confidence 679999999999999999999998899999999965432 2346789999999999999999999998765 66
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.|+||||++|++|.++++.. ....++..++.|++.||+|||+. ||+||||||+||+++.++.+||+++
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~---------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~ 173 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTS---------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP 173 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTC---------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSC
T ss_pred EEEEEEecCCCCHHHHHhcC---------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEec
Confidence 89999999999999999542 35567889999999999999999 9999999999999999999999744
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ 795 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 795 (871)
| |++ +++.++|||||||++|||+||+.||...............
T Consensus 174 ~-----------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~------ 217 (286)
T 3uqc_A 174 A-----------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERD------ 217 (286)
T ss_dssp C-----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBC------
T ss_pred c-----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHH------
Confidence 3 333 3689999999999999999999999854322100000000
Q ss_pred hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHHH
Q 002883 796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQ 867 (871)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~~ 867 (871)
...... ........++.++.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 218 ~~~~~~--------------------~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 218 TAGQPI--------------------EPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp TTSCBC--------------------CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred hccCCC--------------------ChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 000000 0000111334567899999999999999 99999999999876543
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.5e-35 Score=345.15 Aligned_cols=342 Identities=21% Similarity=0.246 Sum_probs=243.6
Q ss_pred cCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCC
Q 002883 109 ISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGND 188 (871)
Q Consensus 109 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~ 188 (871)
+.+++.+++++|.+. .+|..++..+++|+.|+|++|.|++. .|..|+.+++|+.|+|++|.++.+++
T Consensus 50 l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~----------~~~~~~~l~~L~~L~L~~n~l~~~~~-- 116 (597)
T 3oja_B 50 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEI----------DTYAFAYAHTIQKLYMGFNAIRYLPP-- 116 (597)
T ss_dssp GCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEE----------CTTTTTTCTTCCEEECCSSCCCCCCT--
T ss_pred CCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCC----------ChHHhcCCCCCCEEECCCCcCCCCCH--
Confidence 455666666666664 56665555677777777777776621 22346667777777777777766543
Q ss_pred ccccccccCCCcccEEEccCCcCcccCChhh-hhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCcc
Q 002883 189 LRFLDSLVNCTFLEVVSLSSNSLSGVLPNSI-ANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTS 267 (871)
Q Consensus 189 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~-~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 267 (871)
..+..+++|++|+|++|.+++ +|..+ ..+ ++|++|+|++|.+++..|..|+++++|+.|++++|.+++. .
T Consensus 117 ----~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~ 187 (597)
T 3oja_B 117 ----HVFQNVPLLTVLVLERNDLSS-LPRGIFHNT-PKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---D 187 (597)
T ss_dssp ----TTTTTCTTCCEEECCSSCCCC-CCTTTTTTC-TTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---C
T ss_pred ----HHHcCCCCCCEEEeeCCCCCC-CCHHHhccC-CCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---C
Confidence 345667777777888777773 44443 444 5688888888888877777788888888888888888754 2
Q ss_pred ccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCc
Q 002883 268 VGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFV 347 (871)
Q Consensus 268 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 347 (871)
++.+++|+.|++++|.+++ +...++|+.|++++|.+... +..+ .++|+.|+|++|.+++ +..+..+++|+
T Consensus 188 ~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~ 257 (597)
T 3oja_B 188 LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTD--TAWLLNYPGLV 257 (597)
T ss_dssp GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCS
T ss_pred hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccc-cccc--CCCCCEEECCCCCCCC--ChhhccCCCCC
Confidence 5567788888888887763 23445788888888888743 3322 2678888888888874 36677888888
Q ss_pred EEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCc
Q 002883 348 LLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNN 427 (871)
Q Consensus 348 ~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 427 (871)
.|+|++|.+++..|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+
T Consensus 258 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~ 335 (597)
T 3oja_B 258 EVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNS 335 (597)
T ss_dssp EEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSC
T ss_pred EEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCC
Confidence 88888888887778888888888888888888884 56667778888888888888884 55667778888888888888
Q ss_pred CCCCCcccccccccccEEecCCCcCcccCCCCcccccccceeccCCCCCccCCCccccccc
Q 002883 428 FSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGGSPELHLHSC 488 (871)
Q Consensus 428 l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~~~~~~~~~c 488 (871)
+++. | +..+++|+.|++++|+|+|.+.. ..+..+....+.+++..|+.+.......|
T Consensus 336 l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~~~~~~~c 392 (597)
T 3oja_B 336 IVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQLEHGLC 392 (597)
T ss_dssp CCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTCEEETTEE
T ss_pred CCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcchhccCCcc
Confidence 8754 2 66778888899999998886532 23445555556778888887665444444
No 284
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.1e-34 Score=314.45 Aligned_cols=263 Identities=22% Similarity=0.302 Sum_probs=179.1
Q ss_pred ccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCC
Q 002883 165 LGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGV 244 (871)
Q Consensus 165 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~ 244 (871)
+..+++|++|++++|.++.+ +.+..+++|++|++++|.+++. +. +..+ ++|++|++++|.... .+..+
T Consensus 84 ~~~l~~L~~L~L~~n~i~~~--------~~~~~l~~L~~L~l~~n~i~~~-~~-~~~l-~~L~~L~l~~n~~~~-~~~~~ 151 (347)
T 4fmz_A 84 LSNLVKLTNLYIGTNKITDI--------SALQNLTNLRELYLNEDNISDI-SP-LANL-TKMYSLNLGANHNLS-DLSPL 151 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--------GGGTTCTTCSEEECTTSCCCCC-GG-GTTC-TTCCEEECTTCTTCC-CCGGG
T ss_pred hhcCCcCCEEEccCCcccCc--------hHHcCCCcCCEEECcCCcccCc-hh-hccC-CceeEEECCCCCCcc-cccch
Confidence 44555555555555555432 2345555566666666665532 22 3333 346666666664432 23336
Q ss_pred CCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCE
Q 002883 245 GNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQK 324 (871)
Q Consensus 245 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 324 (871)
..+++|+.|++++|.+++..+ +..+++|++|++++|++.+. +. +..+++|+.|++++|.+++..+ +..+++|+.
T Consensus 152 ~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~ 225 (347)
T 4fmz_A 152 SNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNS 225 (347)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCE
T ss_pred hhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcCCcCCE
Confidence 667777777777777664332 66777788888887777743 32 7777788888888887775443 777788888
Q ss_pred EecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcc
Q 002883 325 LDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSF 404 (871)
Q Consensus 325 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 404 (871)
|++++|++++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|++|++++|++
T Consensus 226 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l 299 (347)
T 4fmz_A 226 LKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQL 299 (347)
T ss_dssp EECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred EEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcC
Confidence 8888888874333 77788888888888888743 4577788888888888888743 4577888888888888888
Q ss_pred cccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCc
Q 002883 405 QGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLE 453 (871)
Q Consensus 405 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~ 453 (871)
++..+..|..+++|++|++++|++++..| +..+++|++|++++|+++
T Consensus 300 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 300 GNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 87778888888888888888888886655 777888888888888875
No 285
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.4e-34 Score=316.03 Aligned_cols=306 Identities=25% Similarity=0.333 Sum_probs=198.8
Q ss_pred cCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccccccccCCCCccccccCCCce
Q 002883 35 GNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDY 114 (871)
Q Consensus 35 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 114 (871)
..+++|++|++++|.++ .+|. +..+++|++|+|++|+++ .++. +..+++|++|++++|.+++ ++ .+.++++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCE
Confidence 34455555555555554 2322 445555555555555554 2332 5555555555555555542 22 3555555555
Q ss_pred eeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCCcccccc
Q 002883 115 FAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDS 194 (871)
Q Consensus 115 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 194 (871)
|++++|.+. .++. +..+++|+.|++++|... ..+..+..+++|++|++++|.+..++ .
T Consensus 115 L~l~~n~i~-~~~~--~~~l~~L~~L~l~~n~~~-----------~~~~~~~~l~~L~~L~l~~~~~~~~~--------~ 172 (347)
T 4fmz_A 115 LYLNEDNIS-DISP--LANLTKMYSLNLGANHNL-----------SDLSPLSNMTGLNYLTVTESKVKDVT--------P 172 (347)
T ss_dssp EECTTSCCC-CCGG--GTTCTTCCEEECTTCTTC-----------CCCGGGTTCTTCCEEECCSSCCCCCG--------G
T ss_pred EECcCCccc-Cchh--hccCCceeEEECCCCCCc-----------ccccchhhCCCCcEEEecCCCcCCch--------h
Confidence 555555554 3333 235666666666666443 12233666677777777777665532 2
Q ss_pred ccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCC
Q 002883 195 LVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKL 274 (871)
Q Consensus 195 l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 274 (871)
+..+++|++|++++|.+++. +. +..+ ++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~-~~-~~~l-~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L 245 (347)
T 4fmz_A 173 IANLTDLYSLSLNYNQIEDI-SP-LASL-TSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQL 245 (347)
T ss_dssp GGGCTTCSEEECTTSCCCCC-GG-GGGC-TTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTC
T ss_pred hccCCCCCEEEccCCccccc-cc-ccCC-CccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCC
Confidence 55667777777777777633 22 4444 457778888877775443 7777888888888888875433 7788888
Q ss_pred cEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCC
Q 002883 275 QVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRN 354 (871)
Q Consensus 275 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N 354 (871)
++|++++|+++.. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..+..+..+++|++|++++|
T Consensus 246 ~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 321 (347)
T 4fmz_A 246 TWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQN 321 (347)
T ss_dssp CEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSS
T ss_pred CEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCC
Confidence 8888888888743 4578888888888888888854 45788888888888888888777888888888899999998
Q ss_pred CCCCCCccccCCCCCCCEEeCCCCcCC
Q 002883 355 HLSGPIPLEVGRLKGIQQLDLSENKLS 381 (871)
Q Consensus 355 ~l~~~~~~~~~~l~~L~~L~L~~N~l~ 381 (871)
++++..| +..+++|+.|++++|+|+
T Consensus 322 ~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 322 HITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccccccC--hhhhhccceeehhhhccc
Confidence 8886555 788888999999998876
No 286
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.7e-36 Score=336.22 Aligned_cols=252 Identities=17% Similarity=0.156 Sum_probs=184.3
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc---chHHHHHHHHHHHHcCCC-Cccceeeee----------
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR---GASKSFIAECEALRSIRH-RNLVKIITS---------- 624 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~~~~~---------- 624 (871)
..|...+.||+|+||+||+|++..+++.||||++..... ...+.+.+|+.+++.+.| ++...+..+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 457788999999999999999999999999999863322 235778999999999977 322111111
Q ss_pred -----------ecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 002883 625 -----------CSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIV 693 (871)
Q Consensus 625 -----------~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 693 (871)
+...........+++|+++ +++|.++++...........+++..++.++.|++.||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1111001123457778766 7899999863321111122578889999999999999999999 999
Q ss_pred ecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccc----------cCCCCCCccchhhHHHH
Q 002883 694 HCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYG----------ALGEVSTHGDEYSFGIL 763 (871)
Q Consensus 694 H~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DiwSlG~i 763 (871)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||+
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 9999999999999999999999999875422 333467 999999988 55568899999999999
Q ss_pred HHHHHhCCCCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhccccc
Q 002883 764 MLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSE 843 (871)
Q Consensus 764 l~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 843 (871)
+|||++|+.||.......... .+... ...++..+.+++.+||+
T Consensus 307 l~elltg~~Pf~~~~~~~~~~-------------~~~~~------------------------~~~~~~~~~~li~~~l~ 349 (413)
T 3dzo_A 307 IYWIWCADLPNTDDAALGGSE-------------WIFRS------------------------CKNIPQPVRALLEGFLR 349 (413)
T ss_dssp HHHHHHSSCCCCTTGGGSCSG-------------GGGSS------------------------CCCCCHHHHHHHHHHTC
T ss_pred HHHHHHCCCCCCCcchhhhHH-------------HHHhh------------------------cccCCHHHHHHHHHHcc
Confidence 999999999997543221100 00000 00122457799999999
Q ss_pred CCCCCCCCHHHHHHH
Q 002883 844 ELPRDRMKIQDAIME 858 (871)
Q Consensus 844 ~dP~~RPta~evl~~ 858 (871)
.||++|||+.|+++.
T Consensus 350 ~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 350 YPKEDRLLPLQAMET 364 (413)
T ss_dssp SSGGGSCCHHHHTTS
T ss_pred CChhhCcCHHHHHhC
Confidence 999999999998754
No 287
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.9e-36 Score=354.65 Aligned_cols=246 Identities=23% Similarity=0.347 Sum_probs=197.3
Q ss_pred cCCCCCceeeccccceEEEEEECC-CCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGT-EETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 636 (871)
++|++.+.||+|+||+||+|++.. +++.||||++.... ......+.+|++++++++||||+++++++...+..+....
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 689999999999999999999975 68999999985432 3345678899999999999999999999987644444457
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
|+||||+++++|.+++.. .+++.+++.++.||+.||.|||++ +|+||||||+||+++.+ .+||+|||
T Consensus 160 ~lv~E~~~g~~L~~~~~~---------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEECCCCEECC----C---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCT
T ss_pred EEEEEeCCCCcHHHHHhC---------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecc
Confidence 999999999999987754 489999999999999999999999 99999999999999875 89999999
Q ss_pred cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883 717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQV 796 (871)
Q Consensus 717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 796 (871)
+++..... ....||+.|+|||++.++ ++.++|||||||++|+|++|..||....... .+..
T Consensus 227 ~a~~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------~~~~- 287 (681)
T 2pzi_A 227 AVSRINSF-------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG----------LPED- 287 (681)
T ss_dssp TCEETTCC-------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS----------CCTT-
T ss_pred cchhcccC-------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc----------cccc-
Confidence 99876432 235699999999987665 4899999999999999999999887421110 0000
Q ss_pred hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCC-HHHHHHHHHHHHH
Q 002883 797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMK-IQDAIMELQEAQK 864 (871)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-a~evl~~L~~i~~ 864 (871)
. ........+.+++.+||+.||++||+ ++++.+.+..+.+
T Consensus 288 ----~------------------------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 288 ----D------------------------PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp ----C------------------------HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ----c------------------------cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0 00122345778999999999999995 7777777776643
No 288
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.6e-35 Score=315.69 Aligned_cols=256 Identities=30% Similarity=0.486 Sum_probs=221.4
Q ss_pred cccEEEccCCccCC--CCCCCCCCccccceeeccc-ccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEE
Q 002883 225 HLIYLYMSANRISG--TIPTGVGNLKNLILIAMEV-NLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEV 301 (871)
Q Consensus 225 ~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (871)
+++.|+|++|.+++ .+|..|.++++|++|++++ |.+++.+|..|+.+++|++|+|++|++++..|..|..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 47777777777776 6777777788888888884 77777788888888888888888888887788888888888888
Q ss_pred EccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCC-CCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcC
Q 002883 302 DLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLS-SFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKL 380 (871)
Q Consensus 302 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 380 (871)
+|++|++++..|..|..+++|++|++++|++++.+|..+..++ +|++|++++|++++..|..+..++ |+.|++++|.+
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 8888888888888888888888888888888878888888887 888899998888888888888887 99999999999
Q ss_pred CCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCCc
Q 002883 381 SGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEG 460 (871)
Q Consensus 381 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~ 460 (871)
++..|..|..+++|+.|+|++|++++..+. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|++++.+|...
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 888888899999999999999999866665 8889999999999999999999999999999999999999999999888
Q ss_pred ccccccceeccCCCCCccCCCc
Q 002883 461 VFKNVRAVSIIGNNKLCGGSPE 482 (871)
Q Consensus 461 ~~~~l~~l~l~~N~~~C~~~~~ 482 (871)
.++.++.+++.+|++.|+.|..
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTTSS
T ss_pred cccccChHHhcCCCCccCCCCC
Confidence 8999999999999999997653
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.5e-35 Score=341.11 Aligned_cols=310 Identities=16% Similarity=0.126 Sum_probs=220.1
Q ss_pred CCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccccccccCCCCccccccCCCceee
Q 002883 37 LFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDYFA 116 (871)
Q Consensus 37 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 116 (871)
+.+++.|++++|.++...+..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 44555566666655544444455556666666666665544445555666666666666666554455555666666666
Q ss_pred eeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCCcccccccc
Q 002883 117 VTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLV 196 (871)
Q Consensus 117 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~ 196 (871)
|++|.+. .+|..++..+++|+.|+|++|.+++ ..|..|+.+++|++|++++|.++.++ +.
T Consensus 130 L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~----------~~~~~~~~l~~L~~L~L~~N~l~~~~---------~~ 189 (597)
T 3oja_B 130 LERNDLS-SLPRGIFHNTPKLTTLSMSNNNLER----------IEDDTFQATTSLQNLQLSSNRLTHVD---------LS 189 (597)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCB----------CCTTTTTTCTTCCEEECTTSCCSBCC---------GG
T ss_pred eeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCC----------CChhhhhcCCcCcEEECcCCCCCCcC---------hh
Confidence 6666655 5555555566677777777776652 22334666777777777777776532 34
Q ss_pred CCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcE
Q 002883 197 NCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQV 276 (871)
Q Consensus 197 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 276 (871)
.+++|+.|++++|.+++.. ...+|+.|++++|.++...+.. .++|+.|+|++|.+++ +..+..+++|+.
T Consensus 190 ~l~~L~~L~l~~n~l~~l~------~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~ 258 (597)
T 3oja_B 190 LIPSLFHANVSYNLLSTLA------IPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVE 258 (597)
T ss_dssp GCTTCSEEECCSSCCSEEE------CCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSE
T ss_pred hhhhhhhhhcccCcccccc------CCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCE
Confidence 5567777788887776421 1235888888888887443322 2678888888888885 477888999999
Q ss_pred EEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCC
Q 002883 277 LSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHL 356 (871)
Q Consensus 277 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l 356 (871)
|+|++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.+
T Consensus 259 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l 336 (597)
T 3oja_B 259 VDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 336 (597)
T ss_dssp EECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCC
T ss_pred EECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCC
Confidence 9999999998888899999999999999999985 5777788999999999999998 6788888899999999999999
Q ss_pred CCCCccccCCCCCCCEEeCCCCcCCC
Q 002883 357 SGPIPLEVGRLKGIQQLDLSENKLSG 382 (871)
Q Consensus 357 ~~~~~~~~~~l~~L~~L~L~~N~l~~ 382 (871)
++. + +..+++|+.|++++|++.+
T Consensus 337 ~~~-~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 337 VTL-K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCc-C--hhhcCCCCEEEeeCCCCCC
Confidence 843 3 7788999999999999874
No 290
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.5e-35 Score=313.29 Aligned_cols=237 Identities=19% Similarity=0.297 Sum_probs=182.3
Q ss_pred hcCCCCC-ceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHH-HcCCCCccceeeeeecccCcCCCce
Q 002883 558 TEGFSSA-NLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEAL-RSIRHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 558 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.++|.+. +.||+|+||.||+|.+..+++.||+|+++. ...+.+|++++ +..+||||+++++++... ..+...
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~ 89 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 89 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCce
Confidence 3567777 789999999999999998999999999863 24567888888 556999999999998652 223367
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC---CCceEE
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EMVAHV 712 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl 712 (871)
.++||||+++|+|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl 161 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQ-----AFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKL 161 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEE
T ss_pred EEEEEeecCCCcHHHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEE
Confidence 89999999999999999875432 589999999999999999999999 9999999999999998 789999
Q ss_pred eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883 713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL 792 (871)
Q Consensus 713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~ 792 (871)
+|||++.... +..++.++||||+||++|+|++|+.||........... .....
T Consensus 162 ~Dfg~a~~~~-------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~--~~~~~ 214 (299)
T 3m2w_A 162 TDFGFAKETT-------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRI 214 (299)
T ss_dssp CCCTTCEECT-------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC--SCCSS
T ss_pred eccccccccc-------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH--HHHHH
Confidence 9999987532 23467899999999999999999999975432210000 00000
Q ss_pred CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883 793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME 858 (871)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~ 858 (871)
... .. +...+....+..++.+++.+||+.||++|||+.|+++.
T Consensus 215 ~~~--~~---------------------~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 215 RMG--QY---------------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CTT--CC---------------------SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhc--cc---------------------cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000 00 00001112345567899999999999999999999873
No 291
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.5e-35 Score=320.01 Aligned_cols=246 Identities=19% Similarity=0.140 Sum_probs=183.6
Q ss_pred hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--------cchHHHHHHHHHHHHcCC---------C-----
Q 002883 558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--------RGASKSFIAECEALRSIR---------H----- 615 (871)
Q Consensus 558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h----- 615 (871)
.++|++.+.||+|+||+||+|++ +++.||||+++... ....+.+.+|+++++.++ |
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46799999999999999999998 67999999996542 223477889999998886 5
Q ss_pred ------------CccceeeeeecccC--------cCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHH
Q 002883 616 ------------RNLVKIITSCSSID--------TRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAI 675 (871)
Q Consensus 616 ------------~niv~~~~~~~~~~--------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~ 675 (871)
|||+++++++.+.. .......|+||||+++|++.+.+... .+++..++.++.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~--------~~~~~~~~~i~~ 168 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK--------LSSLATAKSILH 168 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT--------CCCHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc--------CCCHHHHHHHHH
Confidence 45555555444310 01246789999999999776666431 489999999999
Q ss_pred HHHHHHHHHh-hcCCCCeEecCCCCCceeeCCCC--------------------ceEEeecccceecCCCCCCccccccc
Q 002883 676 DVANVLEYLH-HHCHTSIVHCDLKPSNVLLDNEM--------------------VAHVGDFGLSRLLHDNSPDQTSTSRV 734 (871)
Q Consensus 676 ~i~~~L~~LH-~~~~~~ivH~Dlkp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~ 734 (871)
||+.||+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ..
T Consensus 169 qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--------~~ 237 (336)
T 2vuw_A 169 QLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--------IV 237 (336)
T ss_dssp HHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--------EE
T ss_pred HHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--------cE
Confidence 9999999999 88 999999999999999887 8999999999876431 24
Q ss_pred cccccccCcccccCCCCCCccchhhHHHH-HHHHHhCCCCCchhhhhhhhHHHHhhh-CCCchhhhhcChhHHHHHHHHH
Q 002883 735 KGSIGYVAPEYGALGEVSTHGDEYSFGIL-MLEMFTGKRPTDDMFEEGLSLHKYAKM-GLPDQVAEIIDPAILEEALEIQ 812 (871)
Q Consensus 735 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~i-l~elltG~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 812 (871)
.||+.|+|||++.+.. +.++||||+|++ .+++++|..||................ ..+
T Consensus 238 ~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------- 297 (336)
T 2vuw_A 238 VFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFK------------------- 297 (336)
T ss_dssp ECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCS-------------------
T ss_pred EEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccC-------------------
Confidence 7999999999987665 899999998877 788999999986421111011111100 000
Q ss_pred hhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHH
Q 002883 813 AGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAI 856 (871)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl 856 (871)
..........+..++.+++.+||+.| ||+|++
T Consensus 298 -------~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 298 -------TKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp -------SCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred -------cccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 00011223356678899999999976 999988
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.9e-33 Score=304.51 Aligned_cols=288 Identities=18% Similarity=0.221 Sum_probs=162.2
Q ss_pred cCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccccccccCCCCccccccCCCceeeee
Q 002883 39 KLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVT 118 (871)
Q Consensus 39 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 118 (871)
+|+.++++++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|++++|++++..|..|.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4566666666665 4555443 456666666666654445556666666666666666664445556666666666666
Q ss_pred ccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCc-cccCCCcccEEecccccCCCCCCCCccccccccC
Q 002883 119 QNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPE-DLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVN 197 (871)
Q Consensus 119 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 197 (871)
+|.+. .+|..++ ++|++|++++|.++ .+|. .|.++++|++|++++|.++..+. .+..+..
T Consensus 111 ~n~l~-~l~~~~~---~~L~~L~l~~n~i~-----------~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~~~ 171 (332)
T 2ft3_A 111 KNHLV-EIPPNLP---SSLVELRIHDNRIR-----------KVPKGVFSGLRNMNCIEMGGNPLENSGF----EPGAFDG 171 (332)
T ss_dssp SSCCC-SCCSSCC---TTCCEEECCSSCCC-----------CCCSGGGSSCSSCCEEECCSCCCBGGGS----CTTSSCS
T ss_pred CCcCC-ccCcccc---ccCCEEECCCCccC-----------ccCHhHhCCCccCCEEECCCCccccCCC----CcccccC
Confidence 66555 5555443 56777777777665 3333 36666777777777776643111 1223334
Q ss_pred CCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEE
Q 002883 198 CTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVL 277 (871)
Q Consensus 198 l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 277 (871)
+ +|++|++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|+.|++++|.+++..+..|..+++|++|
T Consensus 172 l-~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 246 (332)
T 2ft3_A 172 L-KLNYLRISEAKLT-GIPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLREL 246 (332)
T ss_dssp C-CCSCCBCCSSBCS-SCCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEE
T ss_pred C-ccCEEECcCCCCC-ccCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEE
Confidence 4 6666666666666 3444433 356667777776666555666666666666666666665555566666666666
Q ss_pred EccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCC------CCCCEEecCCCcCC--CCCcccccCCCCCcEE
Q 002883 278 SLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNC------LQLQKLDLSDNNLS--GTIPREVIGLSSFVLL 349 (871)
Q Consensus 278 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l------~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L 349 (871)
+|++|+++ .+|..+..+++|++|+|++|+|++..+..|+.+ .+|+.|++++|.+. +..|..|..+++|+.|
T Consensus 247 ~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l 325 (332)
T 2ft3_A 247 HLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAI 325 (332)
T ss_dssp ECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTE
T ss_pred ECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhh
Confidence 66666666 455556666666666666666665544444432 33444444444443 2333333334444444
Q ss_pred eccCC
Q 002883 350 DLSRN 354 (871)
Q Consensus 350 ~ls~N 354 (871)
++++|
T Consensus 326 ~l~~n 330 (332)
T 2ft3_A 326 QFGNY 330 (332)
T ss_dssp EC---
T ss_pred hcccc
Confidence 44333
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=7.9e-33 Score=299.69 Aligned_cols=268 Identities=18% Similarity=0.256 Sum_probs=161.8
Q ss_pred CcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCcc
Q 002883 169 KNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLK 248 (871)
Q Consensus 169 ~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~ 248 (871)
++|+.|++++|+++.+++ ..+..+++|++|+|++|.+++..|..+..+ ++|++|++++|+++ .+|..+. +
T Consensus 54 ~~l~~L~l~~n~i~~~~~------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~n~l~-~l~~~~~--~ 123 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRK------DDFKGLQHLYALVLVNNKISKIHEKAFSPL-RKLQKLYISKNHLV-EIPPNLP--S 123 (332)
T ss_dssp TTCCEEECCSSCCCEECT------TTTTTCTTCCEEECCSSCCCEECGGGSTTC-TTCCEEECCSSCCC-SCCSSCC--T
T ss_pred CCCeEEECCCCcCCccCH------hHhhCCCCCcEEECCCCccCccCHhHhhCc-CCCCEEECCCCcCC-ccCcccc--c
Confidence 355555666555554322 234455566666666666655445555554 34666666666665 3333333 5
Q ss_pred ccceeecccccccccCCccccCCCCCcEEEccCCCCCC--CCCcccCCCccccEEEccCccccccCcccccCCCCCCEEe
Q 002883 249 NLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISG--EIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLD 326 (871)
Q Consensus 249 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 326 (871)
+|++|++++|.+++..+..|..+++|++|++++|.++. ..+..+..+ +|++|++++|++++ +|..+. ++|+.|+
T Consensus 124 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 124 SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELH 199 (332)
T ss_dssp TCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCB
T ss_pred cCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEE
Confidence 66666666666665555556666666666666666642 445555555 66666666666663 343333 5666667
Q ss_pred cCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccc
Q 002883 327 LSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQG 406 (871)
Q Consensus 327 L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 406 (871)
+++|++++..+..+..+++|+.|++++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|++++|+|++
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCc
Confidence 7777766555566666667777777777766555556666677777777777776 566666667777777777777766
Q ss_pred cCccccCCC------CCCCEEeCCCCcCC--CCCcccccccccccEEecCCCc
Q 002883 407 PIHSGFSSL------KGLQDLDLSRNNFS--GKIPMFLNTFRFLQKLNLSFNN 451 (871)
Q Consensus 407 ~~~~~~~~l------~~L~~L~l~~N~l~--~~~~~~~~~~~~L~~L~l~~N~ 451 (871)
..+..|... ..|+.|++++|.++ +..|..+..+++|+.+++++|+
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 279 VGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 665555442 45667777777665 4566666677777777776664
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.9e-32 Score=296.53 Aligned_cols=248 Identities=21% Similarity=0.250 Sum_probs=121.1
Q ss_pred cCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCc
Q 002883 196 VNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQ 275 (871)
Q Consensus 196 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 275 (871)
..+++|++|+|++|.+++..|..+..+ ++|++|++++|+++ .+|..+. ++|++|++++|.+++..+..|..+++|+
T Consensus 73 ~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 148 (330)
T 1xku_A 73 KNLKNLHTLILINNKISKISPGAFAPL-VKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMI 148 (330)
T ss_dssp TTCTTCCEEECCSSCCCCBCTTTTTTC-TTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCC
T ss_pred ccCCCCCEEECCCCcCCeeCHHHhcCC-CCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCcccc
Confidence 334444444444444443334444433 23444444444444 2222222 3444444554444444444444555555
Q ss_pred EEEccCCCCCC--CCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccC
Q 002883 276 VLSLFGNKISG--EIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSR 353 (871)
Q Consensus 276 ~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 353 (871)
+|++++|.++. ..+..+..+++|++|++++|+++. +|..+. ++|++|++++|++++..+..+..+++|+.|++++
T Consensus 149 ~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 225 (330)
T 1xku_A 149 VVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSF 225 (330)
T ss_dssp EEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCS
T ss_pred EEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 55555555432 334444555555555555555542 332222 4555555555555544455555555555555555
Q ss_pred CCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCC------CCCCEEeCCCCc
Q 002883 354 NHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSL------KGLQDLDLSRNN 427 (871)
Q Consensus 354 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~l~~N~ 427 (871)
|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|++++|+|+++.+..|... ..|+.|++++|.
T Consensus 226 n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~ 304 (330)
T 1xku_A 226 NSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNP 304 (330)
T ss_dssp SCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred CcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCc
Confidence 5555444445555555555555555555 445555555555555555555555544444322 455566666666
Q ss_pred CCC--CCcccccccccccEEecCCCc
Q 002883 428 FSG--KIPMFLNTFRFLQKLNLSFNN 451 (871)
Q Consensus 428 l~~--~~~~~~~~~~~L~~L~l~~N~ 451 (871)
+.. ..|..+..+++++.++|++|+
T Consensus 305 ~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 305 VQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ccccccCccccccccceeEEEecccC
Confidence 542 445556666666666666653
No 295
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.9e-34 Score=304.59 Aligned_cols=253 Identities=28% Similarity=0.460 Sum_probs=231.2
Q ss_pred CcccEEEccCCcCcc--cCChhhhhccccccEEEccC-CccCCCCCCCCCCccccceeecccccccccCCccccCCCCCc
Q 002883 199 TFLEVVSLSSNSLSG--VLPNSIANFSSHLIYLYMSA-NRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQ 275 (871)
Q Consensus 199 ~~L~~L~L~~n~l~~--~~~~~~~~~~~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 275 (871)
.++++|+|++|.+++ .+|..+..+ ++|++|++++ |.+.+.+|..|+++++|++|++++|.+++..|..|..+++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l-~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANL-PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGC-TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCC-CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 468889999999987 788888887 4699999995 999888999999999999999999999988999999999999
Q ss_pred EEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCC-CCCEEecCCCcCCCCCcccccCCCCCcEEeccCC
Q 002883 276 VLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCL-QLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRN 354 (871)
Q Consensus 276 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N 354 (871)
+|+|++|++++..|..+..+++|++|+|++|++++.+|..+..++ +|+.|++++|++++..|..+..++ |+.|++++|
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 999999999988999999999999999999999988999999998 999999999999988999999887 999999999
Q ss_pred CCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcc
Q 002883 355 HLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPM 434 (871)
Q Consensus 355 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 434 (871)
.+++..|..+..+++|+.|+|++|.+++..|. +..+++|++|+|++|+|++..|..|..+++|++|+|++|++++.+|.
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC
Confidence 99988899999999999999999999966555 88899999999999999999999999999999999999999988887
Q ss_pred cccccccccEEecCCCcCccc
Q 002883 435 FLNTFRFLQKLNLSFNNLEGE 455 (871)
Q Consensus 435 ~~~~~~~L~~L~l~~N~l~~~ 455 (871)
. ..+++|+.|++++|+.-|.
T Consensus 287 ~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 287 G-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp S-TTGGGSCGGGTCSSSEEES
T ss_pred C-ccccccChHHhcCCCCccC
Confidence 6 8899999999999995443
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.4e-32 Score=297.58 Aligned_cols=289 Identities=17% Similarity=0.225 Sum_probs=150.0
Q ss_pred cCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccccccccCCCCccccccCCCceeeee
Q 002883 39 KLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVT 118 (871)
Q Consensus 39 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 118 (871)
+|+.++++++.++ .+|..+. ++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|.++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4445555555544 3444332 344555555555543333345555555555555555554444445555555555555
Q ss_pred ccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCC-ccccCCCcccEEecccccCCCCCCCCccccccccC
Q 002883 119 QNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIP-EDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVN 197 (871)
Q Consensus 119 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 197 (871)
+|.+. .+|..++ ++|+.|++++|.++ .++ ..+.++++|++|++++|.++..+. ....+..
T Consensus 109 ~n~l~-~l~~~~~---~~L~~L~l~~n~l~-----------~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~~~ 169 (330)
T 1xku_A 109 KNQLK-ELPEKMP---KTLQELRVHENEIT-----------KVRKSVFNGLNQMIVVELGTNPLKSSGI----ENGAFQG 169 (330)
T ss_dssp SSCCS-BCCSSCC---TTCCEEECCSSCCC-----------BBCHHHHTTCTTCCEEECCSSCCCGGGB----CTTGGGG
T ss_pred CCcCC-ccChhhc---ccccEEECCCCccc-----------ccCHhHhcCCccccEEECCCCcCCccCc----ChhhccC
Confidence 55544 4444432 45666666666655 222 235566666666666666543111 1234455
Q ss_pred CCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEE
Q 002883 198 CTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVL 277 (871)
Q Consensus 198 l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 277 (871)
+++|++|++++|.++ .+|..+. ++|++|++++|++++..+..|..+++|+.|++++|.+++..+..+..+++|++|
T Consensus 170 l~~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 245 (330)
T 1xku_A 170 MKKLSYIRIADTNIT-TIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLREL 245 (330)
T ss_dssp CTTCCEEECCSSCCC-SCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEE
T ss_pred CCCcCEEECCCCccc-cCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEE
Confidence 566666666666665 3444332 346666666666665555666666666666666666665555556666666666
Q ss_pred EccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCC------CCCCEEecCCCcCCC--CCcccccCCCCCcEE
Q 002883 278 SLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNC------LQLQKLDLSDNNLSG--TIPREVIGLSSFVLL 349 (871)
Q Consensus 278 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l------~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L 349 (871)
+|++|+++ .+|..+..+++|++|+|++|+|++..+..|+.. +.|+.|++++|.+.. ..|..|..+.+++.+
T Consensus 246 ~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l 324 (330)
T 1xku_A 246 HLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAV 324 (330)
T ss_dssp ECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGE
T ss_pred ECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEE
Confidence 66666666 455556666666666666666665544444322 344444444444431 233334444444444
Q ss_pred eccCC
Q 002883 350 DLSRN 354 (871)
Q Consensus 350 ~ls~N 354 (871)
+|++|
T Consensus 325 ~L~~N 329 (330)
T 1xku_A 325 QLGNY 329 (330)
T ss_dssp EC---
T ss_pred Eeccc
Confidence 44443
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=5.8e-37 Score=348.81 Aligned_cols=356 Identities=17% Similarity=0.139 Sum_probs=190.6
Q ss_pred CCCCEEecCCCcccccCCcc-ccCCCcCceeeCCCCcccc----cCCccccCCcccceeeccCccccCCCCcccc-ccc-
Q 002883 14 SELRILDLVVNKLEGNIPSE-LGNLFKLVGLGLTGNNYTG----SIPQSLSNLSFLQQLSLSENSLSGNIPSELG-LLK- 86 (871)
Q Consensus 14 ~~L~~L~l~~n~i~~~~~~~-~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~- 86 (871)
+.|++|||++|+++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46788999999887544443 7788889999999998874 3466777888899999998888744444433 355
Q ss_pred ---cccccccccccccC----CCCccccccCCCceeeeeccccccccccccc----cCCCCccEEEccCccCCCCCCccC
Q 002883 87 ---QLNMFQVSANYLTG----SIPIQLFNISSMDYFAVTQNKLVGEIPHYVG----FTLPNIRVLLLGSNWFTGEIPPSI 155 (871)
Q Consensus 87 ---~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~----~~l~~L~~L~l~~n~i~~~~p~~~ 155 (871)
+|++|+|++|.+++ .++..+..+++|++|++++|.+....+..+. ...++|++|+|++|.+++..+.
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-- 160 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE-- 160 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH--
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH--
Confidence 68888888888773 3466666677777777777766533222221 1233455555555544421100
Q ss_pred cCCCCCCccccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhc----cccccEEEc
Q 002883 156 SNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANF----SSHLIYLYM 231 (871)
Q Consensus 156 ~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~----~~~L~~L~L 231 (871)
.+ ...+..+++|++|++++|.+++..+..+... .++|++|++
T Consensus 161 ----~l------------------------------~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L 206 (461)
T 1z7x_W 161 ----PL------------------------------ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKL 206 (461)
T ss_dssp ----HH------------------------------HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEEC
T ss_pred ----HH------------------------------HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEc
Confidence 11 2233344556666666665553333333221 124666666
Q ss_pred cCCccCCC----CCCCCCCccccceeecccccccccC-----CccccCCCCCcEEEccCCCCCCC----CCcccCCCccc
Q 002883 232 SANRISGT----IPTGVGNLKNLILIAMEVNLLTGSI-----PTSVGYLLKLQVLSLFGNKISGE----IPSSLGNLIFL 298 (871)
Q Consensus 232 ~~n~i~~~----~~~~~~~l~~L~~L~l~~N~l~~~~-----~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L 298 (871)
++|.+++. ++..+..+++|+.|++++|.++... +..+..+++|++|+|++|+++.. ++..+..+++|
T Consensus 207 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 286 (461)
T 1z7x_W 207 ESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESL 286 (461)
T ss_dssp TTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTC
T ss_pred cCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCc
Confidence 66666532 2334444555555555555554322 11122345566666666655532 33444445555
Q ss_pred cEEEccCccccccCcccccC-----CCCCCEEecCCCcCCCC----CcccccCCCCCcEEeccCCCCCCCCccccCC---
Q 002883 299 TEVDLQGNSIRGSIPSALGN-----CLQLQKLDLSDNNLSGT----IPREVIGLSSFVLLDLSRNHLSGPIPLEVGR--- 366 (871)
Q Consensus 299 ~~L~L~~N~i~~~~~~~~~~-----l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~--- 366 (871)
++|+|++|.+++..+..+.. .++|+.|++++|.+++. ++..+..+++|++|++++|.+++..+..+..
T Consensus 287 ~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~ 366 (461)
T 1z7x_W 287 KELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLG 366 (461)
T ss_dssp CEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred ceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHc
Confidence 55555555554332222221 14555555555555532 2333344455555555555554332222221
Q ss_pred --CCCCCEEeCCCCcCCC----CCccchhcccCCceeeecCCccc
Q 002883 367 --LKGIQQLDLSENKLSG----EIPTSLASCVGLEYLNFSDNSFQ 405 (871)
Q Consensus 367 --l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~ 405 (871)
.++|++|++++|.+++ .+|..+..+++|++|+|++|+++
T Consensus 367 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 367 QPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp STTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred CCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 3455555555555543 34444444555555555555544
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=1.2e-35 Score=337.94 Aligned_cols=364 Identities=19% Similarity=0.147 Sum_probs=178.3
Q ss_pred cCceeeCCCCcccccCCcc-ccCCcccceeeccCccccC----CCCccccccccccccccccccccCCCCccccccCCCc
Q 002883 39 KLVGLGLTGNNYTGSIPQS-LSNLSFLQQLSLSENSLSG----NIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMD 113 (871)
Q Consensus 39 ~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 113 (871)
+|++|+|++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|+|++|.+.
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~-------------- 69 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELG-------------- 69 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCH--------------
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCC--------------
Confidence 4555555555555332222 4455555555555555442 12333344444444444444443
Q ss_pred eeeeeccccccccccccccCCC----CccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCCc
Q 002883 114 YFAVTQNKLVGEIPHYVGFTLP----NIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDL 189 (871)
Q Consensus 114 ~L~l~~n~l~~~~~~~~~~~l~----~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~ 189 (871)
...+..++..++ +|++|+|++|.+++.. ...+|+.+..+++|++|++++|.++......
T Consensus 70 ----------~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~------~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~- 132 (461)
T 1z7x_W 70 ----------DVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAG------CGVLSSTLRTLPTLQELHLSDNLLGDAGLQL- 132 (461)
T ss_dssp ----------HHHHHHHHHTTCSTTCCCCEEECTTSCCBGGG------HHHHHHHTTSCTTCCEEECCSSBCHHHHHHH-
T ss_pred ----------hHHHHHHHHHHhhCCCceeEEEccCCCCCHHH------HHHHHHHHccCCceeEEECCCCcCchHHHHH-
Confidence 222222222233 5666666666654110 0023444555556666666665553211000
Q ss_pred ccccc-ccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccc
Q 002883 190 RFLDS-LVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSV 268 (871)
Q Consensus 190 ~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 268 (871)
.... ....++|++|+|++|++++.....+ +..+..+++|++|++++|.++...+..+
T Consensus 133 -l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l---------------------~~~l~~~~~L~~L~L~~n~i~~~~~~~l 190 (461)
T 1z7x_W 133 -LCEGLLDPQCRLEKLQLEYCSLSAASCEPL---------------------ASVLRAKPDFKELTVSNNDINEAGVRVL 190 (461)
T ss_dssp -HHHHHTSTTCCCCEEECTTSCCBGGGHHHH---------------------HHHHHHCTTCCEEECCSSBCHHHHHHHH
T ss_pred -HHHHHhcCCCcceEEECCCCCCCHHHHHHH---------------------HHHHhhCCCCCEEECcCCCcchHHHHHH
Confidence 0000 1123345555555555553221111 2223333444444444444443222222
Q ss_pred c-----CCCCCcEEEccCCCCCCC----CCcccCCCccccEEEccCccccccC-----cccccCCCCCCEEecCCCcCCC
Q 002883 269 G-----YLLKLQVLSLFGNKISGE----IPSSLGNLIFLTEVDLQGNSIRGSI-----PSALGNCLQLQKLDLSDNNLSG 334 (871)
Q Consensus 269 ~-----~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~i~~~~-----~~~~~~l~~L~~L~L~~N~l~~ 334 (871)
. ..++|++|+|++|.++.. ++..+..+++|++|+|++|+++... +..+..+++|+.|++++|.+++
T Consensus 191 ~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~ 270 (461)
T 1z7x_W 191 CQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITA 270 (461)
T ss_dssp HHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCH
Confidence 2 134555666666655532 2444455556666666666555322 2222345566666666666653
Q ss_pred C----CcccccCCCCCcEEeccCCCCCCCCccccCC-----CCCCCEEeCCCCcCCCC----CccchhcccCCceeeecC
Q 002883 335 T----IPREVIGLSSFVLLDLSRNHLSGPIPLEVGR-----LKGIQQLDLSENKLSGE----IPTSLASCVGLEYLNFSD 401 (871)
Q Consensus 335 ~----~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~ 401 (871)
. ++..+..+++|++|++++|.+++..+..+.. .++|++|++++|.+++. ++..+..+++|++|+|++
T Consensus 271 ~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~ 350 (461)
T 1z7x_W 271 KGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISN 350 (461)
T ss_dssp HHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCS
T ss_pred HHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccC
Confidence 2 3444555666666666666665333322222 24666666666666643 344455556677777777
Q ss_pred CcccccCccccCC-----CCCCCEEeCCCCcCCC----CCcccccccccccEEecCCCcCccc
Q 002883 402 NSFQGPIHSGFSS-----LKGLQDLDLSRNNFSG----KIPMFLNTFRFLQKLNLSFNNLEGE 455 (871)
Q Consensus 402 N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~----~~~~~~~~~~~L~~L~l~~N~l~~~ 455 (871)
|++++..+..+.. .++|++|++++|++++ .+|..+..+++|++|++++|++++.
T Consensus 351 n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 351 NRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp SBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred CccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 7666544333321 4567777777777664 5566666667777777777776643
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.3e-31 Score=286.72 Aligned_cols=277 Identities=23% Similarity=0.240 Sum_probs=230.7
Q ss_pred cEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeeccccccccc--CCccccCCCCCcEEEc
Q 002883 202 EVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGS--IPTSVGYLLKLQVLSL 279 (871)
Q Consensus 202 ~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~l~~L~~L~L 279 (871)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|+.|++++|.++.. .+..+..+++|++|+|
T Consensus 10 ~~l~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCcc-cCCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 46777777776 5565443 4688888888888866556678889999999999988733 2566778899999999
Q ss_pred cCCCCCCCCCcccCCCccccEEEccCccccccCc-ccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCC
Q 002883 280 FGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIP-SALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSG 358 (871)
Q Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 358 (871)
++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+..+.++++|++|++++|.+++
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 999998 567778899999999999999986655 578899999999999999988888889999999999999999985
Q ss_pred -CCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCccccc
Q 002883 359 -PIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLN 437 (871)
Q Consensus 359 -~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 437 (871)
..|..+..+++|++|++++|.+++..|..|..+++|++|+|++|++++..+..|..+++|++|++++|++++..|..+.
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 5788899999999999999999988889999999999999999999988888899999999999999999998999999
Q ss_pred ccc-cccEEecCCCcCcccCCCCcc---cccccceeccCCCCCccCCCcc
Q 002883 438 TFR-FLQKLNLSFNNLEGEVPSEGV---FKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 438 ~~~-~L~~L~l~~N~l~~~~~~~~~---~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
.++ +|++|+|++|+++|.++.... +...+.+....+...|..|...
T Consensus 245 ~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 245 HFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDK 294 (306)
T ss_dssp CCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGG
T ss_pred hhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhh
Confidence 885 899999999999988764322 2334455566777888877654
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=293.69 Aligned_cols=254 Identities=23% Similarity=0.287 Sum_probs=227.3
Q ss_pred cccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEc
Q 002883 200 FLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSL 279 (871)
Q Consensus 200 ~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 279 (871)
....++.+++.++ .+|..+. ++++.|+|++|+|+...+..|.++++|+.|+|++|.|++..+..|.++++|++|+|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 3567778888887 5676654 46899999999999888899999999999999999999888889999999999999
Q ss_pred cCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCC-CcCCCCCcccccCCCCCcEEeccCCCCCC
Q 002883 280 FGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSD-NNLSGTIPREVIGLSSFVLLDLSRNHLSG 358 (871)
Q Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 358 (871)
++|+|+...+..|..+++|++|+|++|+|+...+..|..+++|+.|+|++ |.+....+..|.++++|++|++++|.++
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~- 198 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR- 198 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-
Confidence 99999977777899999999999999999988788999999999999999 5566555567899999999999999998
Q ss_pred CCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccc
Q 002883 359 PIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNT 438 (871)
Q Consensus 359 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 438 (871)
.+| .+..+++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..
T Consensus 199 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 199 EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 555 5889999999999999999888999999999999999999999999999999999999999999999888888999
Q ss_pred cccccEEecCCCcCcccCCCC
Q 002883 439 FRFLQKLNLSFNNLEGEVPSE 459 (871)
Q Consensus 439 ~~~L~~L~l~~N~l~~~~~~~ 459 (871)
+++|+.|+|++|+|.|.+...
T Consensus 278 l~~L~~L~L~~Np~~CdC~l~ 298 (440)
T 3zyj_A 278 LHHLERIHLHHNPWNCNCDIL 298 (440)
T ss_dssp CTTCCEEECCSSCEECSSTTH
T ss_pred ccCCCEEEcCCCCccCCCCch
Confidence 999999999999999988654
No 301
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.8e-30 Score=293.62 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=224.2
Q ss_pred ccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEcc
Q 002883 201 LEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLF 280 (871)
Q Consensus 201 L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~ 280 (871)
...++.+++.++ .+|..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|.|++..+..|.++++|++|+|+
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CcEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 456777777777 5666544 468999999999998888899999999999999999998888899999999999999
Q ss_pred CCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCC-CcCCCCCcccccCCCCCcEEeccCCCCCCC
Q 002883 281 GNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSD-NNLSGTIPREVIGLSSFVLLDLSRNHLSGP 359 (871)
Q Consensus 281 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 359 (871)
+|+|+...+..|..+++|++|+|++|+|+...+..|.++++|+.|++++ |.+....+..|.++++|++|+|++|.+++
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~- 210 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD- 210 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-
Confidence 9999977777899999999999999999977777899999999999998 56665555678899999999999999984
Q ss_pred CccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCccccccc
Q 002883 360 IPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTF 439 (871)
Q Consensus 360 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 439 (871)
+| .+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+|++..+..+..+
T Consensus 211 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 211 MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 44 58899999999999999998889999999999999999999999999999999999999999999998888889999
Q ss_pred ccccEEecCCCcCcccCCCC
Q 002883 440 RFLQKLNLSFNNLEGEVPSE 459 (871)
Q Consensus 440 ~~L~~L~l~~N~l~~~~~~~ 459 (871)
++|+.|+|++|++.|.+...
T Consensus 290 ~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp TTCCEEECCSSCEECSTTTH
T ss_pred cCCCEEEccCCCcCCCCCch
Confidence 99999999999999988754
No 302
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.8e-30 Score=273.22 Aligned_cols=254 Identities=22% Similarity=0.238 Sum_probs=158.5
Q ss_pred cEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccC
Q 002883 202 EVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFG 281 (871)
Q Consensus 202 ~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 281 (871)
++++++++.++ .+|..+. ++|++|++++|+|++..+..|..+++|++|++++|.+++..+..
T Consensus 14 ~~~~c~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-------------- 75 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGIP---AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAA-------------- 75 (285)
T ss_dssp CEEECCSSCCS-SCCTTCC---TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTT--------------
T ss_pred eEEEcCcCCcc-cCCcCCC---CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhh--------------
Confidence 45666666665 3444332 34666666666665444444555555555555555555444444
Q ss_pred CCCCCCCCcccCCCccccEEEccCcc-ccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCC
Q 002883 282 NKISGEIPSSLGNLIFLTEVDLQGNS-IRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPI 360 (871)
Q Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 360 (871)
|..+++|++|+|++|+ ++...+..|..+++|++|++++|++++..+..+..+++|++|++++|.+++..
T Consensus 76 ----------~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (285)
T 1ozn_A 76 ----------FTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP 145 (285)
T ss_dssp ----------TTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred ----------cCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccC
Confidence 4444455555555554 44333445555555555555555555444555555556666666666665444
Q ss_pred ccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccc
Q 002883 361 PLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFR 440 (871)
Q Consensus 361 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 440 (871)
+..++.+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++..+..+..++
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 45566666777777777777655555677777777777777777777777777778888888888888876666777888
Q ss_pred cccEEecCCCcCcccCCCCcccccccceeccCCCCCccCCCcc
Q 002883 441 FLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 441 ~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
+|+.|++++|++.|.++..+.+..++.+....+...|..|..+
T Consensus 226 ~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 226 ALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp TCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGG
T ss_pred ccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchHh
Confidence 8888888888888777655555556666666777777776654
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=4.3e-31 Score=288.68 Aligned_cols=281 Identities=16% Similarity=0.181 Sum_probs=204.3
Q ss_pred CCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCC
Q 002883 167 KLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGN 246 (871)
Q Consensus 167 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~ 246 (871)
.++.....++++|.++.+|.. +. ++|++|++++|.+++..+..+..+ ++|++|++++|+|++..+..|.+
T Consensus 29 ~C~~~~~c~~~~~~l~~iP~~-------~~--~~L~~L~l~~n~i~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~ 98 (353)
T 2z80_A 29 SCDRNGICKGSSGSLNSIPSG-------LT--EAVKSLDLSNNRITYISNSDLQRC-VNLQALVLTSNGINTIEEDSFSS 98 (353)
T ss_dssp EECTTSEEECCSTTCSSCCTT-------CC--TTCCEEECTTSCCCEECTTTTTTC-TTCCEEECTTSCCCEECTTTTTT
T ss_pred CCCCCeEeeCCCCCccccccc-------cc--ccCcEEECCCCcCcccCHHHhccC-CCCCEEECCCCccCccCHhhcCC
Confidence 344555678888888876642 11 468888888888886555566665 46888888888888777777888
Q ss_pred ccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCC-cccCCCccccEEEccCc-cccccCcccccCCCCCCE
Q 002883 247 LKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIP-SSLGNLIFLTEVDLQGN-SIRGSIPSALGNCLQLQK 324 (871)
Q Consensus 247 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~ 324 (871)
+++|++|++++|.+++..+..|..+++|++|+|++|+++...+ ..+..+++|++|++++| .++...+..|.++++|++
T Consensus 99 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 178 (353)
T 2z80_A 99 LGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEE 178 (353)
T ss_dssp CTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred CCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCE
Confidence 8888888888888886555557888888888888888874433 46778888888888887 466666677888888888
Q ss_pred EecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchh---cccCCceeeecC
Q 002883 325 LDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLA---SCVGLEYLNFSD 401 (871)
Q Consensus 325 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~L~~ 401 (871)
|++++|++++..|..+..+++|++|++++|.++...+..+..+++|+.|++++|.+++..+..+. ....++.++|++
T Consensus 179 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~ 258 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRN 258 (353)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEES
T ss_pred EECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhcccccc
Confidence 88888888877778888888888888888888633333345578888888888888765544443 345677777777
Q ss_pred Ccccc----cCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCC
Q 002883 402 NSFQG----PIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVP 457 (871)
Q Consensus 402 N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 457 (871)
|.+++ .+|..+..+++|+.|++++|+++...+..+..+++|++|++++|+++|.+|
T Consensus 259 ~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 259 VKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 77764 245667778888888888888884444445778888888888888887766
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=9e-30 Score=286.86 Aligned_cols=254 Identities=20% Similarity=0.205 Sum_probs=230.5
Q ss_pred cccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEcc
Q 002883 225 HLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQ 304 (871)
Q Consensus 225 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (871)
+...++.+++.++ .+|..+. ++++.|+|++|.|+...+..|..+++|++|+|++|+|+...+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4678999999998 6676665 789999999999999888999999999999999999998888899999999999999
Q ss_pred CccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCC-CCCCCCccccCCCCCCCEEeCCCCcCCCC
Q 002883 305 GNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRN-HLSGPIPLEVGRLKGIQQLDLSENKLSGE 383 (871)
Q Consensus 305 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 383 (871)
+|+|+...+..|..+++|++|+|++|+|++..+..|..+++|++|++++| .+....+..|..+++|++|+|++|.++ .
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-E 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-S
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-c
Confidence 99999877788999999999999999999887889999999999999995 555444557999999999999999999 5
Q ss_pred CccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCC-ccc
Q 002883 384 IPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE-GVF 462 (871)
Q Consensus 384 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~-~~~ 462 (871)
+| .+..+++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++.++.. ..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 55 4889999999999999999999999999999999999999999999999999999999999999999877654 557
Q ss_pred ccccceeccCCCCCccCCCcc
Q 002883 463 KNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 463 ~~l~~l~l~~N~~~C~~~~~~ 483 (871)
++++.+++.+|||.|+|...|
T Consensus 279 ~~L~~L~L~~Np~~CdC~l~~ 299 (440)
T 3zyj_A 279 HHLERIHLHHNPWNCNCDILW 299 (440)
T ss_dssp TTCCEEECCSSCEECSSTTHH
T ss_pred cCCCEEEcCCCCccCCCCchH
Confidence 889999999999999997654
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.4e-29 Score=286.28 Aligned_cols=254 Identities=21% Similarity=0.195 Sum_probs=229.9
Q ss_pred cccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEcc
Q 002883 225 HLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQ 304 (871)
Q Consensus 225 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (871)
+...++.+++.++ .+|..+. ++|+.|+|++|.|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4678999999998 5666554 689999999999999999999999999999999999998888999999999999999
Q ss_pred CccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCC-CCCCCCccccCCCCCCCEEeCCCCcCCCC
Q 002883 305 GNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRN-HLSGPIPLEVGRLKGIQQLDLSENKLSGE 383 (871)
Q Consensus 305 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 383 (871)
+|+|+...+..|.++++|++|+|++|+|++..+..|..+++|+.|++++| .+....+..|..+++|++|+|++|++++
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~- 210 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD- 210 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-
Confidence 99999888888999999999999999999777789999999999999994 5554445579999999999999999994
Q ss_pred CccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCC-ccc
Q 002883 384 IPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE-GVF 462 (871)
Q Consensus 384 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~-~~~ 462 (871)
+| .+..+++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++.++.. ..+
T Consensus 211 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 211 MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 44 4888999999999999999999999999999999999999999999999999999999999999999877654 457
Q ss_pred ccccceeccCCCCCccCCCcc
Q 002883 463 KNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 463 ~~l~~l~l~~N~~~C~~~~~~ 483 (871)
++++.+++.+|||.|+|...|
T Consensus 290 ~~L~~L~L~~Np~~CdC~~~~ 310 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDCDILW 310 (452)
T ss_dssp TTCCEEECCSSCEECSTTTHH
T ss_pred cCCCEEEccCCCcCCCCCchH
Confidence 889999999999999997643
No 306
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=284.26 Aligned_cols=277 Identities=19% Similarity=0.177 Sum_probs=143.0
Q ss_pred cccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEc
Q 002883 200 FLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSL 279 (871)
Q Consensus 200 ~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 279 (871)
.....++++|.++ .+|..+. ++|++|++++|+|++..+..|.++++|+.|++++|.+++..+..|..+++|++|+|
T Consensus 32 ~~~~c~~~~~~l~-~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 32 RNGICKGSSGSLN-SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp TTSEEECCSTTCS-SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCeEeeCCCCCcc-ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 3344555555555 3444433 24555555555555444445555555555555555555555555555555555555
Q ss_pred cCCCCCCCCCcccCCCccccEEEccCccccccCc-ccccCCCCCCEEecCCC-cCCCCCcccccCCCCCcEEeccCCCCC
Q 002883 280 FGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIP-SALGNCLQLQKLDLSDN-NLSGTIPREVIGLSSFVLLDLSRNHLS 357 (871)
Q Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~ls~N~l~ 357 (871)
++|++++..+..|.++++|++|+|++|+++...+ ..|..+++|++|++++| .+++..+..+.++++|++|++++|.++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 5555553333335555555555555555553322 24555555555555555 344444455555555555555555555
Q ss_pred CCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccC---CCCCCCEEeCCCCcCCC----
Q 002883 358 GPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFS---SLKGLQDLDLSRNNFSG---- 430 (871)
Q Consensus 358 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~l~~N~l~~---- 430 (871)
+..|..+..+++|++|++++|.++...+..+..+++|++|++++|++++..+..+. ....++.+++++|.+++
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~ 267 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF 267 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHH
T ss_pred ccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchh
Confidence 44455555555555555555555422222233455555555555555544333222 23445555555555543
Q ss_pred CCcccccccccccEEecCCCcCcccCCCC-cccccccceeccCCCCCccCC
Q 002883 431 KIPMFLNTFRFLQKLNLSFNNLEGEVPSE-GVFKNVRAVSIIGNNKLCGGS 480 (871)
Q Consensus 431 ~~~~~~~~~~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~C~~~ 480 (871)
.+|..+..+++|++|++++|+++..++.. ..+++++.+++.+|++.|+|+
T Consensus 268 ~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 268 QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 23444555555555555555555433322 344555555555555555553
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=7.1e-30 Score=273.23 Aligned_cols=234 Identities=20% Similarity=0.235 Sum_probs=158.9
Q ss_pred cccEEEccCCccCCC--CCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCC-cccCCCccccEE
Q 002883 225 HLIYLYMSANRISGT--IPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIP-SSLGNLIFLTEV 301 (871)
Q Consensus 225 ~L~~L~L~~n~i~~~--~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L 301 (871)
+|++|+|++|+++.. .+..+..+++|++|++++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|
T Consensus 53 ~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 131 (306)
T 2z66_A 53 QLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 131 (306)
T ss_dssp TCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEE
T ss_pred cCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEE
Confidence 344444444444421 1333444555555555555555 344456666666666666666664433 456666777777
Q ss_pred EccCccccccCcccccCCCCCCEEecCCCcCCC-CCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcC
Q 002883 302 DLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSG-TIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKL 380 (871)
Q Consensus 302 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 380 (871)
++++|.+.+..+..|..+++|++|++++|.+++ ..|..+..+++|++|++++|.+++..|..+..+++|+.|+|++|++
T Consensus 132 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 211 (306)
T 2z66_A 132 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211 (306)
T ss_dssp ECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred ECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCcc
Confidence 777777766666667777777777777777764 4566777777777777777777766677777788888888888888
Q ss_pred CCCCccchhcccCCceeeecCCcccccCccccCCCC-CCCEEeCCCCcCCCCCc--ccccccccccEEecCCCcCcccCC
Q 002883 381 SGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLK-GLQDLDLSRNNFSGKIP--MFLNTFRFLQKLNLSFNNLEGEVP 457 (871)
Q Consensus 381 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~--~~~~~~~~L~~L~l~~N~l~~~~~ 457 (871)
++..+..+..+++|++|+|++|++++..+..+..++ +|++|+|++|++++..+ .....+...+.+.+..|.+.|..|
T Consensus 212 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 212 FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp SBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred CccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 766666788888888888888888888888888874 89999999998886432 223344556667778888888777
Q ss_pred CC
Q 002883 458 SE 459 (871)
Q Consensus 458 ~~ 459 (871)
..
T Consensus 292 ~~ 293 (306)
T 2z66_A 292 SD 293 (306)
T ss_dssp GG
T ss_pred hh
Confidence 54
No 308
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=7.8e-31 Score=298.03 Aligned_cols=244 Identities=18% Similarity=0.139 Sum_probs=170.8
Q ss_pred cccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEcc
Q 002883 225 HLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQ 304 (871)
Q Consensus 225 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (871)
+|++|+|++|.|++..|..|..+++|+.|+|++|.+++..| |..+++|++|+|++|.|++.. ..++|++|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 57777777777776666777777777777777777775444 777777777777777777432 22677777777
Q ss_pred CccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccC-CCCCCCEEeCCCCcCCCC
Q 002883 305 GNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVG-RLKGIQQLDLSENKLSGE 383 (871)
Q Consensus 305 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~ 383 (871)
+|.|++..+. .+++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.|++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 7777755543 346777778888877776677777777788888888877766666665 677788888888887744
Q ss_pred CccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCC--Ccc
Q 002883 384 IPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPS--EGV 461 (871)
Q Consensus 384 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~--~~~ 461 (871)
|. +..+++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++.|..+. ...
T Consensus 185 -~~-~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 -KG-QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp -EC-CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred -cc-cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 22 33477788888888888765444 7777888888888888874 566677778888888888888743221 233
Q ss_pred cccccceecc-------CCCCCccCCCc
Q 002883 462 FKNVRAVSII-------GNNKLCGGSPE 482 (871)
Q Consensus 462 ~~~l~~l~l~-------~N~~~C~~~~~ 482 (871)
++.+..+.+. .|++.|.|+..
T Consensus 261 l~~L~~l~~~~~~~~~~~~~~~c~~~~~ 288 (487)
T 3oja_A 261 NQRVQTVAKQTVKKLTGQNEEECTVPTL 288 (487)
T ss_dssp CHHHHHHHHHHHHHHTSSSSCCCSSTTC
T ss_pred CCCCcEEeccccccccCCCcccccCCcc
Confidence 4445555554 77788887643
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.3e-29 Score=266.25 Aligned_cols=254 Identities=20% Similarity=0.185 Sum_probs=178.5
Q ss_pred ccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCcccc
Q 002883 171 LIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNL 250 (871)
Q Consensus 171 L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L 250 (871)
-+.++++++.++.++.. -.++|++|+|++|.+++..+..+..+ ++|++|++++|++++..|..|.++++|
T Consensus 13 ~~~~~c~~~~l~~ip~~---------~~~~l~~L~l~~n~i~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L 82 (285)
T 1ozn_A 13 KVTTSCPQQGLQAVPVG---------IPAASQRIFLHGNRISHVPAASFRAC-RNLTILWLHSNVLARIDAAAFTGLALL 82 (285)
T ss_dssp SCEEECCSSCCSSCCTT---------CCTTCSEEECTTSCCCEECTTTTTTC-TTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred CeEEEcCcCCcccCCcC---------CCCCceEEEeeCCcCCccCHHHcccC-CCCCEEECCCCccceeCHhhcCCccCC
Confidence 47899999999987642 13689999999999997666677776 579999999999998889999999999
Q ss_pred ceeeccccc-ccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCC
Q 002883 251 ILIAMEVNL-LTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSD 329 (871)
Q Consensus 251 ~~L~l~~N~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 329 (871)
++|++++|. ++...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 83 ~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 162 (285)
T 1ozn_A 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHG 162 (285)
T ss_dssp CEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCC
Confidence 999999997 8877788888888888888888888876677777788888888888877766666677777777777777
Q ss_pred CcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCc
Q 002883 330 NNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIH 409 (871)
Q Consensus 330 N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 409 (871)
|++++..+..+..+++|+.|++++|.+++..|..+..++ +|+.|++++|++++..+
T Consensus 163 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~------------------------~L~~L~l~~n~l~~~~~ 218 (285)
T 1ozn_A 163 NRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG------------------------RLMTLYLFANNLSALPT 218 (285)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT------------------------TCCEEECCSSCCSCCCH
T ss_pred CcccccCHHHhcCccccCEEECCCCcccccCHhHccCcc------------------------cccEeeCCCCcCCcCCH
Confidence 777644444455555555555555555544444444444 45555555555544444
Q ss_pred cccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCC
Q 002883 410 SGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE 459 (871)
Q Consensus 410 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~ 459 (871)
..|..+++|+.|++++|++....+. .+.+..++.+..+.|.+.|..|..
T Consensus 219 ~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 219 EALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHHTTCTTCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGG
T ss_pred HHcccCcccCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchH
Confidence 4455555555555555555533221 122233555566677777766653
No 310
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.8e-32 Score=320.49 Aligned_cols=423 Identities=14% Similarity=0.078 Sum_probs=259.0
Q ss_pred CcCCCCCCEEecCCCccc---ccCCcccc------------CCCcCceeeCCCCcccccCCccccCC--cccceeeccCc
Q 002883 10 ITHCSELRILDLVVNKLE---GNIPSELG------------NLFKLVGLGLTGNNYTGSIPQSLSNL--SFLQQLSLSEN 72 (871)
Q Consensus 10 ~~~l~~L~~L~l~~n~i~---~~~~~~~~------------~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~n 72 (871)
+.++++|+.|+|+++... +.+|..++ .+++|++|+|++|.+++..+..+..+ .+|++|+|++|
T Consensus 69 ~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~ 148 (592)
T 3ogk_B 69 SRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKC 148 (592)
T ss_dssp HHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESC
T ss_pred HHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCC
Confidence 567888999999885431 23333333 67889999999998887666777664 44999999888
Q ss_pred c-ccC-CCCccccccccccccccccccccCC----CCccccccCCCceeeeeccccc----cccccccccCCCCccEEEc
Q 002883 73 S-LSG-NIPSELGLLKQLNMFQVSANYLTGS----IPIQLFNISSMDYFAVTQNKLV----GEIPHYVGFTLPNIRVLLL 142 (871)
Q Consensus 73 ~-l~~-~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~~l~~L~~L~l 142 (871)
. ++. .++..+..+++|++|+|++|.+++. ++..+.++++|++|++++|.+. +.++..+ ..+++|+.|++
T Consensus 149 ~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~-~~~~~L~~L~L 227 (592)
T 3ogk_B 149 SGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIA-RNCRSLVSVKV 227 (592)
T ss_dssp EEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHH-HHCTTCCEEEC
T ss_pred CCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHH-hhCCCCcEEec
Confidence 6 221 1223334788899999999888755 3334556788888888888875 2233322 36788888888
Q ss_pred cCccCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhc
Q 002883 143 GSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANF 222 (871)
Q Consensus 143 ~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~ 222 (871)
++|.+. .+|..+..+++|++|+++.+...... ......+..+++|+.|+++++... .+|..+..+
T Consensus 228 ~~~~~~-----------~l~~~~~~~~~L~~L~l~~~~~~~~~---~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~ 292 (592)
T 3ogk_B 228 GDFEIL-----------ELVGFFKAAANLEEFCGGSLNEDIGM---PEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFA 292 (592)
T ss_dssp SSCBGG-----------GGHHHHHHCTTCCEEEECBCCCCTTC---TTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGG
T ss_pred cCccHH-----------HHHHHHhhhhHHHhhcccccccccch---HHHHHHhhccccccccCccccchh-HHHHHHhhc
Confidence 888776 46667888888888888864322111 113345667778888888876443 455555444
Q ss_pred cccccEEEccCCccCCCCC-CCCCCccccceeecccccccc-cCCccccCCCCCcEEEccC-----------CCCCCCC-
Q 002883 223 SSHLIYLYMSANRISGTIP-TGVGNLKNLILIAMEVNLLTG-SIPTSVGYLLKLQVLSLFG-----------NKISGEI- 288 (871)
Q Consensus 223 ~~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~L~~-----------n~l~~~~- 288 (871)
++|++|+|++|.+++... ..+..+++|+.|+++ |.+.. ..+..+..+++|++|+|++ |.++...
T Consensus 293 -~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~ 370 (592)
T 3ogk_B 293 -AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGL 370 (592)
T ss_dssp -GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHH
T ss_pred -CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHH
Confidence 468888888887664333 235677788888887 44432 2233335567788888773 4554321
Q ss_pred CcccCCCccccEEEccCccccccCcccccC-CCCCCEEecC----CCcCCCC-----CcccccCCCCCcEEeccCCC--C
Q 002883 289 PSSLGNLIFLTEVDLQGNSIRGSIPSALGN-CLQLQKLDLS----DNNLSGT-----IPREVIGLSSFVLLDLSRNH--L 356 (871)
Q Consensus 289 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~~~~l~~L~~L~ls~N~--l 356 (871)
+..+..+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|+.|++++|. +
T Consensus 371 ~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l 450 (592)
T 3ogk_B 371 IALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGL 450 (592)
T ss_dssp HHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGC
T ss_pred HHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCc
Confidence 122344677777777777776555555544 6777777774 5666642 22234556677777776433 4
Q ss_pred CCCCccccCC-CCCCCEEeCCCCcCCCC-CccchhcccCCceeeecCCccccc-CccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 357 SGPIPLEVGR-LKGIQQLDLSENKLSGE-IPTSLASCVGLEYLNFSDNSFQGP-IHSGFSSLKGLQDLDLSRNNFSGKIP 433 (871)
Q Consensus 357 ~~~~~~~~~~-l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~ 433 (871)
++..+..+.. +++|++|++++|++++. ++..+..+++|++|+|++|++++. .+..+..+++|++|+|++|+++....
T Consensus 451 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~ 530 (592)
T 3ogk_B 451 TDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQ 530 (592)
T ss_dssp CHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCT
T ss_pred cHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHH
Confidence 4333333332 56677777777766532 233445566677777777766533 22233456666666666666664322
Q ss_pred cc-ccccccccEEecCCC
Q 002883 434 MF-LNTFRFLQKLNLSFN 450 (871)
Q Consensus 434 ~~-~~~~~~L~~L~l~~N 450 (871)
.. ...+|.+....+..+
T Consensus 531 ~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 531 DLMQMARPYWNIELIPSR 548 (592)
T ss_dssp TGGGGCCTTEEEEEECCC
T ss_pred HHHHHhCCCcEEEEecCc
Confidence 22 233455544444433
No 311
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.5e-28 Score=264.73 Aligned_cols=225 Identities=18% Similarity=0.250 Sum_probs=162.3
Q ss_pred cccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEcc
Q 002883 225 HLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQ 304 (871)
Q Consensus 225 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (871)
+++.|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..+..+++|++|+|+
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 3555555555555 44444555555555555555555 45555555555555555555555 445555555555555555
Q ss_pred CccccccCccccc---------CCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeC
Q 002883 305 GNSIRGSIPSALG---------NCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDL 375 (871)
Q Consensus 305 ~N~i~~~~~~~~~---------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 375 (871)
+|++.+.+|..+. ++++|++|+|++|+++ .+|..+..+++|++|++++|.++ .+|..++.+++|++|+|
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDL 236 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEEC
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEEC
Confidence 5555555554443 4888888888888887 77777888888888888888888 45667888888888888
Q ss_pred CCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcc
Q 002883 376 SENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEG 454 (871)
Q Consensus 376 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~ 454 (871)
++|.+.+.+|..|..+++|++|+|++|++.+..|..+..+++|++|+|++|++.+.+|..+..+++|+.+++..|.+..
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 8888888888888888888888888888888888888888888888888888888888888888888888888777654
No 312
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.3e-28 Score=261.95 Aligned_cols=225 Identities=21% Similarity=0.253 Sum_probs=167.7
Q ss_pred CcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEE
Q 002883 199 TFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLS 278 (871)
Q Consensus 199 ~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 278 (871)
++++.|+|++|.++ .+|..+..+ ++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l-~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRL-SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGG-TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred cceeEEEccCCCch-hcChhhhhC-CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 45666666666666 556666664 35667777776666 56666666777777777777766 5566677777777777
Q ss_pred ccCCCCCCCCCcccCC---------CccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEE
Q 002883 279 LFGNKISGEIPSSLGN---------LIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLL 349 (871)
Q Consensus 279 L~~n~l~~~~~~~~~~---------l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 349 (871)
|++|++.+.+|..+.. +++|++|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+..+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEE
Confidence 7776666566665543 788888888888887 66777888888888888888887 455567788888888
Q ss_pred eccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCC
Q 002883 350 DLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFS 429 (871)
Q Consensus 350 ~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 429 (871)
++++|.+.+.+|..++.+++|+.|+|++|.+.+.+|..+..+++|++|+|++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 88888887778888888888888888888887788888888888888888888888888888888888888888777655
No 313
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.1e-27 Score=277.33 Aligned_cols=129 Identities=24% Similarity=0.324 Sum_probs=74.9
Q ss_pred CCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEe
Q 002883 271 LLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLD 350 (871)
Q Consensus 271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 350 (871)
+++|+.|+|++|+|++ +|.. +++|+.|++++|.++ .+|.. +++|+.|+|++|+|++ +| ..+++|+.|+
T Consensus 180 ~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~ 247 (622)
T 3g06_A 180 PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELM 247 (622)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEE
T ss_pred CCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEE
Confidence 3455555555555552 2221 245555555555555 23321 3556666666666663 33 3445666666
Q ss_pred ccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCC
Q 002883 351 LSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLK 416 (871)
Q Consensus 351 ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 416 (871)
+++|.|+ .+|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|++++..+..+..++
T Consensus 248 Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 248 VSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 6666666 3443 4566777777777777 5566677777777777777777766666555443
No 314
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.5e-27 Score=274.20 Aligned_cols=221 Identities=26% Similarity=0.300 Sum_probs=125.2
Q ss_pred CcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEE
Q 002883 199 TFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLS 278 (871)
Q Consensus 199 ~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 278 (871)
++|++|+|++|+++ .+|. ..++|++|+|++|+|++ +|. .+++|+.|++++|+++. +|.. +++|++|+
T Consensus 81 ~~L~~L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~ 147 (622)
T 3g06_A 81 PELRTLEVSGNQLT-SLPV----LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELS 147 (622)
T ss_dssp TTCCEEEECSCCCS-CCCC----CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred CCCCEEEcCCCcCC-cCCC----CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEE
Confidence 44555555555554 2333 11345555555555553 222 34555555555555553 2322 35566666
Q ss_pred ccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCC
Q 002883 279 LFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSG 358 (871)
Q Consensus 279 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 358 (871)
|++|++++ +|. .+.+|+.|++++|+|++ +| ..+++|+.|++++|+|++ +|. .+++|+.|++++|.++
T Consensus 148 Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~- 214 (622)
T 3g06_A 148 VSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNRLT- 214 (622)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS-
T ss_pred CcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCccc-
Confidence 66666653 332 23456666666666663 33 334566666666666663 332 2356666666666666
Q ss_pred CCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccc
Q 002883 359 PIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNT 438 (871)
Q Consensus 359 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 438 (871)
.+|. .+++|+.|+|++|.|++ +| ..+++|+.|+|++|+|+++++ .+++|+.|+|++|+|+ .+|..+..
T Consensus 215 ~l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~-~lp~~l~~ 282 (622)
T 3g06_A 215 SLPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLT-RLPESLIH 282 (622)
T ss_dssp SCCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCC-SCCGGGGG
T ss_pred ccCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCC-cCCHHHhh
Confidence 3332 23567777777777763 44 344667777777777764333 4566777777777777 55666777
Q ss_pred cccccEEecCCCcCcccCC
Q 002883 439 FRFLQKLNLSFNNLEGEVP 457 (871)
Q Consensus 439 ~~~L~~L~l~~N~l~~~~~ 457 (871)
+++|+.|+|++|++++..|
T Consensus 283 l~~L~~L~L~~N~l~~~~~ 301 (622)
T 3g06_A 283 LSSETTVNLEGNPLSERTL 301 (622)
T ss_dssp SCTTCEEECCSCCCCHHHH
T ss_pred ccccCEEEecCCCCCCcCH
Confidence 7777777777777776544
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=6.5e-30 Score=273.84 Aligned_cols=202 Identities=22% Similarity=0.227 Sum_probs=99.9
Q ss_pred ccccceeecccccccccCCccc--cCCCCCcEEEccCCCCCCCCCcccCCC-----ccccEEEccCccccccCcccccCC
Q 002883 247 LKNLILIAMEVNLLTGSIPTSV--GYLLKLQVLSLFGNKISGEIPSSLGNL-----IFLTEVDLQGNSIRGSIPSALGNC 319 (871)
Q Consensus 247 l~~L~~L~l~~N~l~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~i~~~~~~~~~~l 319 (871)
+++|++|++++|.+++..|..+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|+|++..+..|+++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 4444444444444444444433 4444455555555554433 4444443 445555555555544444445555
Q ss_pred CCCCEEecCCCcCCCC--Ccccc--cCCCCCcEEeccCCCCCCC--Cc-cccCCCCCCCEEeCCCCcCCCCCc-cchhcc
Q 002883 320 LQLQKLDLSDNNLSGT--IPREV--IGLSSFVLLDLSRNHLSGP--IP-LEVGRLKGIQQLDLSENKLSGEIP-TSLASC 391 (871)
Q Consensus 320 ~~L~~L~L~~N~l~~~--~~~~~--~~l~~L~~L~ls~N~l~~~--~~-~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l 391 (871)
++|++|+|++|++.+. .+..+ ..+++|++|++++|.+++. .+ ..+..+++|++|+|++|++++..| ..+..+
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 5555555555554322 12222 4445555555555555411 11 122344555555555555554432 334445
Q ss_pred cCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcc
Q 002883 392 VGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEG 454 (871)
Q Consensus 392 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~ 454 (871)
++|++|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +..+++|++|++++|++++
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 55666666666655 3333333 5666666666666644 44 6666666666666666654
No 316
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=5.8e-31 Score=309.30 Aligned_cols=398 Identities=14% Similarity=0.061 Sum_probs=298.2
Q ss_pred CCCCCCEEecCCCcccccCCccccCC--CcCceeeCCCCc-ccc-cCCccccCCcccceeeccCccccCC----CCcccc
Q 002883 12 HCSELRILDLVVNKLEGNIPSELGNL--FKLVGLGLTGNN-YTG-SIPQSLSNLSFLQQLSLSENSLSGN----IPSELG 83 (871)
Q Consensus 12 ~l~~L~~L~l~~n~i~~~~~~~~~~l--~~L~~L~L~~n~-l~~-~~p~~~~~l~~L~~L~Ls~n~l~~~----~~~~~~ 83 (871)
++++|++|+|++|.+++..+..++.+ .+|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 78999999999999988778888775 459999999987 221 1233345889999999999998866 334567
Q ss_pred cccccccccccccccc----CCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCC
Q 002883 84 LLKQLNMFQVSANYLT----GSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNAS 159 (871)
Q Consensus 84 ~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~ 159 (871)
.+++|++|++++|.++ +.++..+.++++|+.|++++|.+. .+|..+ ..+++|+.|+++.+... ++ ..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~~~~-~~~~~L~~L~l~~~~~~--~~-----~~ 260 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELVGFF-KAAANLEEFCGGSLNED--IG-----MP 260 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGHHHH-HHCTTCCEEEECBCCCC--TT-----CT
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHHHHH-hhhhHHHhhcccccccc--cc-----hH
Confidence 8899999999999997 234445668899999999999987 466554 48999999999874332 11 11
Q ss_pred CCCccccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCC
Q 002883 160 SIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGT 239 (871)
Q Consensus 160 ~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~ 239 (871)
..+..+..+++|+.|+++++.... .+..+..+++|++|+|++|.+++.....+....++|++|+++ +.+.+.
T Consensus 261 ~~~~~l~~~~~L~~L~l~~~~~~~-------l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~ 332 (592)
T 3ogk_B 261 EKYMNLVFPRKLCRLGLSYMGPNE-------MPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDR 332 (592)
T ss_dssp TSSSCCCCCTTCCEEEETTCCTTT-------GGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHH
T ss_pred HHHHHhhccccccccCccccchhH-------HHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHH
Confidence 345567888999999999875443 345567789999999999998754433333334689999999 545433
Q ss_pred -CCCCCCCccccceeecc-----------cccccccCCcc-ccCCCCCcEEEccCCCCCCCCCcccCC-CccccEEEcc-
Q 002883 240 -IPTGVGNLKNLILIAME-----------VNLLTGSIPTS-VGYLLKLQVLSLFGNKISGEIPSSLGN-LIFLTEVDLQ- 304 (871)
Q Consensus 240 -~~~~~~~l~~L~~L~l~-----------~N~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~- 304 (871)
.+..+..+++|++|+++ .|.++...... +..+++|++|+++.|++++..+..+.. +++|+.|+|+
T Consensus 333 ~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~ 412 (592)
T 3ogk_B 333 GLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVL 412 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEE
T ss_pred HHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEee
Confidence 33334678999999999 46776433333 456899999999999998766666665 8899999996
Q ss_pred ---Ccccccc-----CcccccCCCCCCEEecCCCc--CCCCCccccc-CCCCCcEEeccCCCCCCC-CccccCCCCCCCE
Q 002883 305 ---GNSIRGS-----IPSALGNCLQLQKLDLSDNN--LSGTIPREVI-GLSSFVLLDLSRNHLSGP-IPLEVGRLKGIQQ 372 (871)
Q Consensus 305 ---~N~i~~~-----~~~~~~~l~~L~~L~L~~N~--l~~~~~~~~~-~l~~L~~L~ls~N~l~~~-~~~~~~~l~~L~~ 372 (871)
.|.+++. ++..+.++++|+.|++++|. +++..+..+. .+++|++|++++|.+++. ++..+..+++|++
T Consensus 413 ~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~ 492 (592)
T 3ogk_B 413 LDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQK 492 (592)
T ss_dssp CSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCE
T ss_pred cCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCe
Confidence 6778753 33446779999999998644 6654444443 488999999999999853 3455678999999
Q ss_pred EeCCCCcCCCC-CccchhcccCCceeeecCCcccccCcccc-CCCCCCCEEeCCCC
Q 002883 373 LDLSENKLSGE-IPTSLASCVGLEYLNFSDNSFQGPIHSGF-SSLKGLQDLDLSRN 426 (871)
Q Consensus 373 L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~l~~N 426 (871)
|++++|.+++. ++..+..+++|++|+|++|+++......+ ..++.+....+..+
T Consensus 493 L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 493 LEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp EEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred eeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 99999998744 34445678999999999999986544433 35677777666555
No 317
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.2e-29 Score=267.55 Aligned_cols=249 Identities=21% Similarity=0.212 Sum_probs=204.9
Q ss_pred ccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCc-ccCChhhh-------hccccccEEEccCCcc
Q 002883 165 LGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLS-GVLPNSIA-------NFSSHLIYLYMSANRI 236 (871)
Q Consensus 165 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~-~~~~~~~~-------~~~~~L~~L~L~~n~i 236 (871)
++..++|+.|++++|.+ .++ ..+.. .|++|+|++|.++ ..+|..+. .+ ++|++|+|++|++
T Consensus 39 ~~~~~~L~~l~l~~n~l-~~p-------~~~~~--~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l-~~L~~L~L~~n~l 107 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE-ADL-------GQFTD--IIKSLSLKRLTVRAARIPSRILFGALRVLGI-SGLQELTLENLEV 107 (312)
T ss_dssp EEEEEECTTHHHHCCTT-CCC-------HHHHH--HHHHCCCCEEEEEEEECBHHHHHHHHHHHTT-SCCCEEEEEEEBC
T ss_pred EccCCCceeEeeccccc-ccH-------HHHHH--HHhhcccccccccCCCcCHHHHHHHHHhcCc-CCccEEEccCCcc
Confidence 55667788888888877 433 22222 2788888888884 34566554 44 5799999999999
Q ss_pred CCCCCCCC--CCccccceeecccccccccCCccccCC-----CCCcEEEccCCCCCCCCCcccCCCccccEEEccCcccc
Q 002883 237 SGTIPTGV--GNLKNLILIAMEVNLLTGSIPTSVGYL-----LKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIR 309 (871)
Q Consensus 237 ~~~~~~~~--~~l~~L~~L~l~~N~l~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~ 309 (871)
++..|..+ ..+++|++|++++|.+++. |..+..+ ++|++|+|++|+|++..+..|+.+++|++|+|++|++.
T Consensus 108 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 186 (312)
T 1wwl_A 108 TGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPEL 186 (312)
T ss_dssp BSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTC
T ss_pred cchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcC
Confidence 98888876 8999999999999999976 8888877 89999999999999888899999999999999999987
Q ss_pred cc--Ccccc--cCCCCCCEEecCCCcCCCC---CcccccCCCCCcEEeccCCCCCCCCc-cccCCCCCCCEEeCCCCcCC
Q 002883 310 GS--IPSAL--GNCLQLQKLDLSDNNLSGT---IPREVIGLSSFVLLDLSRNHLSGPIP-LEVGRLKGIQQLDLSENKLS 381 (871)
Q Consensus 310 ~~--~~~~~--~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 381 (871)
+. .+..+ ..+++|++|+|++|+|++. ....+..+++|++|++++|++++..| ..+..+++|++|+|++|+|+
T Consensus 187 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 187 GERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp HHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred cchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 54 23344 8899999999999999832 22445688999999999999997664 45677899999999999999
Q ss_pred CCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCC
Q 002883 382 GEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSG 430 (871)
Q Consensus 382 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 430 (871)
.+|..+. ++|++|+|++|+|++. |. +..+++|++|++++|++++
T Consensus 267 -~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 267 -QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred -hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 7777776 8999999999999977 54 8999999999999999985
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6e-29 Score=266.99 Aligned_cols=237 Identities=22% Similarity=0.238 Sum_probs=124.2
Q ss_pred CCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcE
Q 002883 197 NCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQV 276 (871)
Q Consensus 197 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 276 (871)
.+++|++|+|++|++++..|..+..+ ++|++|+|++|++++..+ +..+++|++|++++|.+++.. ..++|++
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~ 103 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPF-TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTC-TTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCC-CcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCE
Confidence 34455666666666654444444444 346666666665554333 555555666666665555321 2255555
Q ss_pred EEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCccccc-CCCCCcEEeccCCC
Q 002883 277 LSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVI-GLSSFVLLDLSRNH 355 (871)
Q Consensus 277 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~ls~N~ 355 (871)
|++++|++++..+. .+++|++|++++|++++..+..+..+++|++|++++|.+++..+..+. .+++|++|++++|.
T Consensus 104 L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 180 (317)
T 3o53_A 104 LHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (317)
T ss_dssp EECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCc
Confidence 55555555533322 234555555555555555455555555555555555555544444442 45555555555555
Q ss_pred CCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCC-CCCcc
Q 002883 356 LSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFS-GKIPM 434 (871)
Q Consensus 356 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~ 434 (871)
+++. + ....+++|++|+|++|++++ +|..+..+++|++|+|++|+|++ +|..+..+++|+.|++++|+++ +.+|.
T Consensus 181 l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~ 256 (317)
T 3o53_A 181 IYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (317)
T ss_dssp CCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHH
T ss_pred Cccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHH
Confidence 5522 2 22235555555555555552 33335555555555555555553 3444555555555555555555 44455
Q ss_pred cccccccccEEecC
Q 002883 435 FLNTFRFLQKLNLS 448 (871)
Q Consensus 435 ~~~~~~~L~~L~l~ 448 (871)
.+..+++|+.|+++
T Consensus 257 ~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 257 FFSKNQRVQTVAKQ 270 (317)
T ss_dssp HHHTCHHHHHHHHH
T ss_pred HHhccccceEEECC
Confidence 55555555555555
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6.5e-29 Score=266.69 Aligned_cols=259 Identities=18% Similarity=0.125 Sum_probs=215.7
Q ss_pred cccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEc
Q 002883 200 FLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSL 279 (871)
Q Consensus 200 ~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 279 (871)
+++.++++.+.+. ..+..+....++|++|+|++|+|++..|..|.++++|+.|+|++|.+++..+ +..+++|++|+|
T Consensus 11 ~l~i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred ceeEeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 4667788888887 3445555555689999999999998888899999999999999999996554 899999999999
Q ss_pred cCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCC
Q 002883 280 FGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGP 359 (871)
Q Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 359 (871)
++|++++.. ..++|++|++++|++++..+.. +++|+.|++++|++++..+..+..+++|++|++++|.+++.
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEE
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcc
Confidence 999998432 3489999999999999765544 57899999999999987788899999999999999999977
Q ss_pred CccccC-CCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccc
Q 002883 360 IPLEVG-RLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNT 438 (871)
Q Consensus 360 ~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 438 (871)
.+..+. .+++|++|+|++|.+++. +. ...+++|++|+|++|+|++.++ .|..+++|+.|+|++|+++ .+|..+..
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~-~l~~~~~~ 235 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV-LIEKALRF 235 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC-EECTTCCC
T ss_pred cHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCccc-chhhHhhc
Confidence 677664 789999999999999954 33 3358999999999999997655 4889999999999999999 57888999
Q ss_pred cccccEEecCCCcCcccCCC--CcccccccceeccCC
Q 002883 439 FRFLQKLNLSFNNLEGEVPS--EGVFKNVRAVSIIGN 473 (871)
Q Consensus 439 ~~~L~~L~l~~N~l~~~~~~--~~~~~~l~~l~l~~N 473 (871)
+++|+.|++++|+++|..+. ...++.++.+++.++
T Consensus 236 l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp CTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCCCEEEccCCCccCcCHHHHHhccccceEEECCCc
Confidence 99999999999999954322 234566777777633
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=3.4e-28 Score=276.34 Aligned_cols=247 Identities=23% Similarity=0.235 Sum_probs=206.7
Q ss_pred CCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEE
Q 002883 198 CTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVL 277 (871)
Q Consensus 198 l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 277 (871)
+++|++|+|++|.+++..|..+..+ ++|++|+|++|.|++..| +..+++|+.|+|++|.|++.. ..++|++|
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L 104 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPF-TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETL 104 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTC-TTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCC-CCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEE
Confidence 4478888888888886666677666 468888888888886555 888899999999999988543 23889999
Q ss_pred EccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCccccc-CCCCCcEEeccCCCC
Q 002883 278 SLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVI-GLSSFVLLDLSRNHL 356 (871)
Q Consensus 278 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~ls~N~l 356 (871)
+|++|.|++..+. .+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999999865554 457899999999999988888999999999999999999988888876 789999999999999
Q ss_pred CCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCC-CCCccc
Q 002883 357 SGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFS-GKIPMF 435 (871)
Q Consensus 357 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~ 435 (871)
++. + .+..+++|+.|+|++|.+++. |..+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|.++ +.+|..
T Consensus 182 ~~~-~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccc-c-ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 854 3 344699999999999999964 5559999999999999999996 5667899999999999999998 677888
Q ss_pred ccccccccEEecC-------CCcCcccCCCC
Q 002883 436 LNTFRFLQKLNLS-------FNNLEGEVPSE 459 (871)
Q Consensus 436 ~~~~~~L~~L~l~-------~N~l~~~~~~~ 459 (871)
+..++.|+.++++ .|+..|.++..
T Consensus 258 ~~~l~~L~~l~~~~~~~~~~~~~~~c~~~~~ 288 (487)
T 3oja_A 258 FSKNQRVQTVAKQTVKKLTGQNEEECTVPTL 288 (487)
T ss_dssp HTTCHHHHHHHHHHHHHHTSSSSCCCSSTTC
T ss_pred HHhCCCCcEEeccccccccCCCcccccCCcc
Confidence 9999999999997 77777666543
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=7.9e-27 Score=245.43 Aligned_cols=210 Identities=23% Similarity=0.212 Sum_probs=148.7
Q ss_pred ccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecC
Q 002883 249 NLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLS 328 (871)
Q Consensus 249 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 328 (871)
+|++|++++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444455554444444455555556666666665554444556666666666666666665555666666666666666
Q ss_pred CCcCCCCCcccccCCCCCcEEeccCCCCCCC-CccccCCCCCCCEEeCCCCcCCCCCccchhcccCCc----eeeecCCc
Q 002883 329 DNNLSGTIPREVIGLSSFVLLDLSRNHLSGP-IPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLE----YLNFSDNS 403 (871)
Q Consensus 329 ~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~ 403 (871)
+|.+++..+..+..+++|++|++++|.+++. +|..+..+++|++|++++|++++..+..|..+.+|+ +|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 6666655555666677777777777777643 477778888888888888888877777777777777 88999999
Q ss_pred ccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCC
Q 002883 404 FQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE 459 (871)
Q Consensus 404 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~ 459 (871)
+++..+..+.. .+|+.|++++|++++..+..+..+++|+.|++++|+++|.++..
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 98777666654 48999999999999877777889999999999999999988754
No 322
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=6.1e-29 Score=286.06 Aligned_cols=186 Identities=16% Similarity=0.044 Sum_probs=131.0
Q ss_pred eeccccceEEEEEECCCCcEEEEEEeeccc----------cchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCCce
Q 002883 567 IGIGGYGYVYKGILGTEETNVAVKVLDLQQ----------RGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 567 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 635 (871)
.+.|++|.+..++..-.|+.||||++.... ....+.+.+|+++|+++ .|+||+++++++.+. ..
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~-----~~ 316 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENA-----QS 316 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECS-----SE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEEC-----CE
Confidence 456666766666665578889999996432 12335789999999999 799999999998776 77
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF 715 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 715 (871)
.||||||++|++|.+++...+ +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+||
T Consensus 317 ~yLVMEyv~G~~L~d~i~~~~-------~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 317 GWLVMEKLPGRLLSDMLAAGE-------EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp EEEEEECCCSEEHHHHHHTTC-------CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEecCCCCcHHHHHHhCC-------CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeec
Confidence 999999999999999998754 45554 4889999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCC
Q 002883 716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPT 774 (871)
Q Consensus 716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf 774 (871)
|+|+...... ......+||+.|||||++.+ .+..++|+||+|++.+++.+|..|+
T Consensus 384 GlAr~~~~~~---~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 384 GSIVTTPQDC---SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp TTEESCC------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred ccCeeCCCCC---ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 9998765432 22334679999999998764 5678899999999988887665544
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=2.4e-30 Score=304.20 Aligned_cols=428 Identities=14% Similarity=0.069 Sum_probs=252.7
Q ss_pred CcCCCCCCEEecCCCcccc---cCC------------ccccCCCcCceeeCCCCcccccCCcccc-CCcccceeeccCc-
Q 002883 10 ITHCSELRILDLVVNKLEG---NIP------------SELGNLFKLVGLGLTGNNYTGSIPQSLS-NLSFLQQLSLSEN- 72 (871)
Q Consensus 10 ~~~l~~L~~L~l~~n~i~~---~~~------------~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n- 72 (871)
+..++.|+.|+|+++.... ..| ..+..+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 62 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~ 141 (594)
T 2p1m_B 62 IRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCE 141 (594)
T ss_dssp HHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCE
T ss_pred HhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcC
Confidence 4667889999999876321 112 1234677899999999988877777775 6889999999988
Q ss_pred cccCC-CCccccccccccccccccccccCCCCcccc----ccCCCceeeeeccc--cccccccccccCCCCccEEEccCc
Q 002883 73 SLSGN-IPSELGLLKQLNMFQVSANYLTGSIPIQLF----NISSMDYFAVTQNK--LVGEIPHYVGFTLPNIRVLLLGSN 145 (871)
Q Consensus 73 ~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~----~l~~L~~L~l~~n~--l~~~~~~~~~~~l~~L~~L~l~~n 145 (871)
.++.. ++..+..+++|++|+|++|.+++..+..+. .+++|+.|++++|. +.......+...+++|+.|++++|
T Consensus 142 ~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 142 GFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp EEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 55422 444455788999999998888765544443 56688888888886 221111122224688888888887
Q ss_pred -cCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCCccccccccCCCcccEE-EccCCcCcccCChhhhhcc
Q 002883 146 -WFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVV-SLSSNSLSGVLPNSIANFS 223 (871)
Q Consensus 146 -~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L-~L~~n~l~~~~~~~~~~~~ 223 (871)
.++ .+|..+..+++|++|+++.+...-.....-.....+.++++|+.| .+.+.... .++..+..+
T Consensus 222 ~~~~-----------~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~-~l~~~~~~~- 288 (594)
T 2p1m_B 222 VPLE-----------KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPA-YLPAVYSVC- 288 (594)
T ss_dssp SCHH-----------HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGG-GGGGGHHHH-
T ss_pred CcHH-----------HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchh-hHHHHHHhh-
Confidence 222 355667778888888866553210000000022346677778877 34433322 333333333
Q ss_pred ccccEEEccCCccCCCCCC-CCCCccccceeecccccccccCCcc-ccCCCCCcEEEccC---------CCCCCCCCccc
Q 002883 224 SHLIYLYMSANRISGTIPT-GVGNLKNLILIAMEVNLLTGSIPTS-VGYLLKLQVLSLFG---------NKISGEIPSSL 292 (871)
Q Consensus 224 ~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~-~~~l~~L~~L~L~~---------n~l~~~~~~~~ 292 (871)
++|++|+|++|.+++.... .+..+++|+.|++++| ++...... ...+++|++|+|++ +.++......+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 4688888888886643222 2456778888888877 44222222 23467788887743 34432222222
Q ss_pred C-CCccccEEEccCccccccCccccc-CCCCCCEEecC--C----CcCCCCC-----cccccCCCCCcEEeccCCCCCCC
Q 002883 293 G-NLIFLTEVDLQGNSIRGSIPSALG-NCLQLQKLDLS--D----NNLSGTI-----PREVIGLSSFVLLDLSRNHLSGP 359 (871)
Q Consensus 293 ~-~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~~-----~~~~~~l~~L~~L~ls~N~l~~~ 359 (871)
. .+++|+.|+++.|.+++.....+. .+++|+.|+++ + |.+++.. +..+..+++|+.|++++ .+++.
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~ 446 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDK 446 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHH
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHH
Confidence 2 366777777777777654444444 46777777777 3 4454211 11245566777777765 55544
Q ss_pred CccccCC-CCCCCEEeCCCCcCCCCCccch-hcccCCceeeecCCcccccCcc-ccCCCCCCCEEeCCCCcCCCCCcccc
Q 002883 360 IPLEVGR-LKGIQQLDLSENKLSGEIPTSL-ASCVGLEYLNFSDNSFQGPIHS-GFSSLKGLQDLDLSRNNFSGKIPMFL 436 (871)
Q Consensus 360 ~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~ 436 (871)
.+..++. +++|+.|+|++|.+++..+..+ ..+++|++|+|++|++++.... ....+++|+.|++++|+++......+
T Consensus 447 ~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l 526 (594)
T 2p1m_B 447 VFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLL 526 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHH
T ss_pred HHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHH
Confidence 4444444 6667777777777664444333 4567777777777776533332 23346677777777776643222223
Q ss_pred -cccccccEEecCCCcC
Q 002883 437 -NTFRFLQKLNLSFNNL 452 (871)
Q Consensus 437 -~~~~~L~~L~l~~N~l 452 (871)
..+++|+...+..+.-
T Consensus 527 ~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 527 GQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHCTTEEEEEECSSSC
T ss_pred HHhCCCCEEEEecCCCc
Confidence 3456665555555543
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.3e-25 Score=234.96 Aligned_cols=206 Identities=21% Similarity=0.211 Sum_probs=141.9
Q ss_pred cceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCC
Q 002883 250 LILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSD 329 (871)
Q Consensus 250 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 329 (871)
.+.+++++|.++ .+|..+. ++|+.|+|++|+++...+..|..+++|++|+|++|+++...+..|.++++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 334444444444 2333332 4566666666666655555666666666666666666655555566666677777777
Q ss_pred CcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCc
Q 002883 330 NNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIH 409 (871)
Q Consensus 330 N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 409 (871)
|++++..+..|..+++|++|++++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|+++++.+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 77665555566667777777777777776666667777777777777777776555667777888888888888887777
Q ss_pred cccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCC
Q 002883 410 SGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPS 458 (871)
Q Consensus 410 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~ 458 (871)
..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++.|.+..
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 7788888888888888888876666788888888888888888877753
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=6e-26 Score=239.60 Aligned_cols=206 Identities=23% Similarity=0.209 Sum_probs=131.5
Q ss_pred CCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCC
Q 002883 244 VGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQ 323 (871)
Q Consensus 244 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 323 (871)
+.++++++++++++|.++ .+|..+. ++++.|+|++|+|++..+..|..+++|++|+|++|+|++..+ ...+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 456667777777777777 3444442 567777777777766566667777777777777777764322 25666677
Q ss_pred EEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCc
Q 002883 324 KLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNS 403 (871)
Q Consensus 324 ~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 403 (871)
+|++++|+|+ .+|..+.++++|++|++++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 7777777766 555666666666666666666665555566666666666666666665555556666666666666666
Q ss_pred ccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccC
Q 002883 404 FQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEV 456 (871)
Q Consensus 404 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~ 456 (871)
|+++.+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|.|.+
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 66555555666666666666666666 44555555556666666666665544
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=5.2e-26 Score=239.17 Aligned_cols=226 Identities=19% Similarity=0.197 Sum_probs=187.2
Q ss_pred EEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCC
Q 002883 203 VVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGN 282 (871)
Q Consensus 203 ~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n 282 (871)
.++.++..++ .+|..+. ++|++|++++|+|++..+..|.++++|++|++++|.+++..+..|..+++|++|+|++|
T Consensus 11 ~~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp EEECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred eEEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 4556666665 4565443 46888888888888777778888888899999888888777778888899999999999
Q ss_pred CCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCC-CcccccCCCCCcEEeccCCCCCCCCc
Q 002883 283 KISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGT-IPREVIGLSSFVLLDLSRNHLSGPIP 361 (871)
Q Consensus 283 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~ls~N~l~~~~~ 361 (871)
++++..+..|.++++|++|++++|++++..+..+..+++|++|++++|.+++. +|..+..+++|++|++++|++++..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 98877778888899999999999999877777788899999999999999854 58888999999999999999987777
Q ss_pred cccCCCCCCC----EEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 362 LEVGRLKGIQ----QLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIP 433 (871)
Q Consensus 362 ~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 433 (871)
..+..+.+|+ .|++++|.+++..+..+. ..+|++|+|++|++++..+..|..+++|+.|++++|++++..+
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 7787777777 899999999965555554 4589999999999998888888999999999999999986543
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=1.7e-25 Score=236.15 Aligned_cols=207 Identities=22% Similarity=0.164 Sum_probs=166.7
Q ss_pred ccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCc
Q 002883 268 VGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFV 347 (871)
Q Consensus 268 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 347 (871)
++.+++++++++++|.++ .+|..+. ++++.|+|++|+|++..+..|.++++|+.|+|++|.|++. +. ...+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCC
Confidence 566788888888888888 4555443 5788888888888877778888888888888888888744 32 26788888
Q ss_pred EEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCc
Q 002883 348 LLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNN 427 (871)
Q Consensus 348 ~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 427 (871)
+|++++|+++ .+|..+..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 8888888888 677778888888888888888887767788888888888888888888777778888888888888888
Q ss_pred CCCCCcccccccccccEEecCCCcCcccCCCCcccccccceeccCCCCCccCC
Q 002883 428 FSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGGS 480 (871)
Q Consensus 428 l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~~ 480 (871)
|++..+..+..+++|+.|+|++|+++..++.......++.+.+.+|||.|+|.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCc
Confidence 88766667788888888888888888666555556678888888888888884
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=4.5e-25 Score=230.99 Aligned_cols=206 Identities=21% Similarity=0.230 Sum_probs=187.3
Q ss_pred CCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEec
Q 002883 272 LKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDL 351 (871)
Q Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 351 (871)
.+.+.+++++++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|++++|++++..+..|..+++|++|++
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 46889999999999 5666554 68999999999999887789999999999999999999776677889999999999
Q ss_pred cCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCC
Q 002883 352 SRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGK 431 (871)
Q Consensus 352 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 431 (871)
++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99999977777889999999999999999988888899999999999999999988888899999999999999999988
Q ss_pred CcccccccccccEEecCCCcCcccCCC-CcccccccceeccCCCCCccCC
Q 002883 432 IPMFLNTFRFLQKLNLSFNNLEGEVPS-EGVFKNVRAVSIIGNNKLCGGS 480 (871)
Q Consensus 432 ~~~~~~~~~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~~~C~~~ 480 (871)
.+..+..+++|++|++++|++++.++. ...++.++.+++.+|||.|+|.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 888899999999999999999987664 3457889999999999999996
No 329
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=1.6e-29 Score=297.27 Aligned_cols=404 Identities=14% Similarity=0.082 Sum_probs=286.0
Q ss_pred cCCCCCCEEecCCCcccccCCcccc-CCCcCceeeCCCC-ccccc-CCccccCCcccceeeccCccccCCCCcccc----
Q 002883 11 THCSELRILDLVVNKLEGNIPSELG-NLFKLVGLGLTGN-NYTGS-IPQSLSNLSFLQQLSLSENSLSGNIPSELG---- 83 (871)
Q Consensus 11 ~~l~~L~~L~l~~n~i~~~~~~~~~-~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~---- 83 (871)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+.
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 4688999999999999887788886 6999999999999 66533 445566899999999999998866655554
Q ss_pred cccccccccccccc--ccCC-CCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCC
Q 002883 84 LLKQLNMFQVSANY--LTGS-IPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASS 160 (871)
Q Consensus 84 ~l~~L~~L~l~~n~--l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~ 160 (871)
.+++|++|++++|. +... ++.-+..+++|+.|++++|...+.+|..+. .+++|+.|+++.+... .-+ ..+..
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~-~~~~L~~L~l~~~~~~-~~~---~~~~~ 256 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQ-RAPQLEELGTGGYTAE-VRP---DVYSG 256 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHH-HCTTCSEEECSBCCCC-CCH---HHHHH
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHh-cCCcceEcccccccCc-cch---hhHHH
Confidence 66799999999997 2211 111234569999999999943334665554 8899999997766421 000 01113
Q ss_pred CCccccCCCcccEE-ecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCC
Q 002883 161 IPEDLGKLKNLIRL-NFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGT 239 (871)
Q Consensus 161 lp~~~~~l~~L~~L-~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~ 239 (871)
++..+.++++|+.| .+.+..... ....+..+++|++|+|++|.+++.....+....++|++|++++| +++.
T Consensus 257 l~~~l~~~~~L~~Ls~~~~~~~~~-------l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~ 328 (594)
T 2p1m_B 257 LSVALSGCKELRCLSGFWDAVPAY-------LPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDA 328 (594)
T ss_dssp HHHHHHTCTTCCEEECCBTCCGGG-------GGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHH
T ss_pred HHHHHhcCCCcccccCCcccchhh-------HHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHH
Confidence 55568889999998 444332211 22233467899999999999874433333333467999999998 5432
Q ss_pred CCCC-CCCccccceeecc---------cccccccCCcccc-CCCCCcEEEccCCCCCCCCCcccC-CCccccEEEcc--C
Q 002883 240 IPTG-VGNLKNLILIAME---------VNLLTGSIPTSVG-YLLKLQVLSLFGNKISGEIPSSLG-NLIFLTEVDLQ--G 305 (871)
Q Consensus 240 ~~~~-~~~l~~L~~L~l~---------~N~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~--~ 305 (871)
.... ...+++|+.|++. .+.+++.....+. .+++|+.|+++.|+++......+. .+++|+.|+|+ +
T Consensus 329 ~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~ 408 (594)
T 2p1m_B 329 GLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIE 408 (594)
T ss_dssp HHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESS
T ss_pred HHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeeccc
Confidence 2222 2357899999883 3556544333443 489999999999999865555554 58899999999 4
Q ss_pred ----ccccccC-----cccccCCCCCCEEecCCCcCCCCCcccccC-CCCCcEEeccCCCCCCCCcccc-CCCCCCCEEe
Q 002883 306 ----NSIRGSI-----PSALGNCLQLQKLDLSDNNLSGTIPREVIG-LSSFVLLDLSRNHLSGPIPLEV-GRLKGIQQLD 374 (871)
Q Consensus 306 ----N~i~~~~-----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~ls~N~l~~~~~~~~-~~l~~L~~L~ 374 (871)
|.++... +..+..+++|+.|+|++ .+++..+..+.. +++|+.|++++|.+++..+..+ ..+++|+.|+
T Consensus 409 ~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~ 487 (594)
T 2p1m_B 409 PKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLE 487 (594)
T ss_dssp TTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEE
T ss_pred CCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEE
Confidence 5665221 22366789999999987 676555555555 8999999999999976555555 6689999999
Q ss_pred CCCCcCCCCCcc-chhcccCCceeeecCCcccccCcccc-CCCCCCCEEeCCCCcC
Q 002883 375 LSENKLSGEIPT-SLASCVGLEYLNFSDNSFQGPIHSGF-SSLKGLQDLDLSRNNF 428 (871)
Q Consensus 375 L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~l~~N~l 428 (871)
|++|.+++.... ....+++|++|++++|+++......+ ..+++|+...+..+.-
T Consensus 488 L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 488 IRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp EESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred CcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 999999744443 34568999999999999964444444 5678887777766643
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=3.2e-25 Score=232.30 Aligned_cols=221 Identities=22% Similarity=0.246 Sum_probs=165.2
Q ss_pred ccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccC
Q 002883 226 LIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQG 305 (871)
Q Consensus 226 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (871)
+..+++.++.+.+. ..+..+++|+.|++++|.++. ...+..+++|++|+|++|++++ . ..+..+++|++|+|++
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTT
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCC
Confidence 44555555555432 234556666777777766662 2346677777777777777764 2 3677777788888888
Q ss_pred ccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 306 NSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIP 385 (871)
Q Consensus 306 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 385 (871)
|.+++..+..|..+++|++|++++|++++..+..|..+++|++|++++|.+++..+..++.+++|+.|++++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 88876666677778888888888888876666667778888888888888876666667888888888888888887777
Q ss_pred cchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCC
Q 002883 386 TSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSE 459 (871)
Q Consensus 386 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~ 459 (871)
..|..+++|++|+|++|++++..+..|..+++|+.|++++|.+.+. +++|+.|++++|.++|.+|..
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 7778888888888888888887777788888888888888888754 457888889999998887754
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=3.8e-25 Score=231.76 Aligned_cols=206 Identities=21% Similarity=0.231 Sum_probs=145.5
Q ss_pred cccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEcc
Q 002883 225 HLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQ 304 (871)
Q Consensus 225 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (871)
+|+.|++++|.++. ...+..+++|++|++++|.+++ ...+..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 42 ~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 42 SIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHD--ISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCC--CGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCC--chhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 46666666666652 2346666666666666666664 2356677777777777777776666667777777777777
Q ss_pred CccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCC
Q 002883 305 GNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEI 384 (871)
Q Consensus 305 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 384 (871)
+|++++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|++++..+..++.+++|+.|++++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (272)
T 3rfs_A 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVP 197 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccC
Confidence 77777666666777777777777777777666666677777777777777777666666777777888888888877766
Q ss_pred ccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCccccccccc
Q 002883 385 PTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRF 441 (871)
Q Consensus 385 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 441 (871)
+..|..+++|+.|+|++|++.+ .+++|+.|+++.|+++|.+|..+..++.
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 198 DGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred HHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccccCC
Confidence 6667777888888888887763 2456777888888888888877766543
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=2e-25 Score=255.39 Aligned_cols=189 Identities=14% Similarity=0.149 Sum_probs=142.0
Q ss_pred CCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--------chHHHHHHHHHHHHcCCCCccceeeeeecccCcC
Q 002883 560 GFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--------GASKSFIAECEALRSIRHRNLVKIITSCSSIDTR 631 (871)
Q Consensus 560 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 631 (871)
.+...+.||+|+||+||+|.. .++.+++|+...... ...+++.+|++++++++||||+++..++...
T Consensus 337 ~~~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~--- 411 (540)
T 3en9_A 337 RKIPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDL--- 411 (540)
T ss_dssp -----------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEET---
T ss_pred cCCCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeC---
Confidence 345567999999999999965 578899998633211 1134579999999999999999554444332
Q ss_pred CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 002883 632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH 711 (871)
Q Consensus 632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 711 (871)
...|+||||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+|
T Consensus 412 --~~~~lVmE~~~ggsL~~~l~~---------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~k 469 (540)
T 3en9_A 412 --DNKRIMMSYINGKLAKDVIED---------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLY 469 (540)
T ss_dssp --TTTEEEEECCCSEEHHHHSTT---------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEE
T ss_pred --CccEEEEECCCCCCHHHHHHH---------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEE
Confidence 346999999999999999864 457899999999999999 9999999999999998 999
Q ss_pred EeecccceecCCCCCCcc----ccccccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCc
Q 002883 712 VGDFGLSRLLHDNSPDQT----STSRVKGSIGYVAPEYGAL--GEVSTHGDEYSFGILMLEMFTGKRPTD 775 (871)
Q Consensus 712 l~Dfg~a~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltG~~pf~ 775 (871)
|+|||+|+.......... ......||+.|+|||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 470 L~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 470 IIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp ECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred EEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 999999998754211100 1234679999999998776 567888999999998888888877764
No 333
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=5.3e-24 Score=227.71 Aligned_cols=224 Identities=20% Similarity=0.199 Sum_probs=147.3
Q ss_pred CcccEEEccCCcCcccCChh---hhhccccccEEEccCCccCCCCCCCC--CCccccceeecccccccccCC----cccc
Q 002883 199 TFLEVVSLSSNSLSGVLPNS---IANFSSHLIYLYMSANRISGTIPTGV--GNLKNLILIAMEVNLLTGSIP----TSVG 269 (871)
Q Consensus 199 ~~L~~L~L~~n~l~~~~~~~---~~~~~~~L~~L~L~~n~i~~~~~~~~--~~l~~L~~L~l~~N~l~~~~~----~~~~ 269 (871)
..++.+.+.++.++...-.. .... ++|++|++++|++++..|..+ ..+++|++|++++|.+++..+ ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAY-SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHH-SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhccc-CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 34677777777765221111 1122 358999999999988888887 888889999999998886544 3345
Q ss_pred CCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCcccccc--C--cccccCCCCCCEEecCCCcCCCCCcc----ccc
Q 002883 270 YLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGS--I--PSALGNCLQLQKLDLSDNNLSGTIPR----EVI 341 (871)
Q Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~ 341 (871)
.+++|++|+|++|++.+..+..|+.+++|++|+|++|++.+. . +..+..+++|++|+|++|+++ .++. .+.
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~ 221 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAA 221 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHh
Confidence 678888888888888877777888888888888888886532 1 223456777888888888776 3333 245
Q ss_pred CCCCCcEEeccCCCCCCCCccccCCC---CCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCC
Q 002883 342 GLSSFVLLDLSRNHLSGPIPLEVGRL---KGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGL 418 (871)
Q Consensus 342 ~l~~L~~L~ls~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 418 (871)
.+++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L 296 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEV 296 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCc
Confidence 66777777777777776556555554 46666666666666 4454443 4566666666665543 11 4445555
Q ss_pred CEEeCCCCcCC
Q 002883 419 QDLDLSRNNFS 429 (871)
Q Consensus 419 ~~L~l~~N~l~ 429 (871)
+.|+|++|+++
T Consensus 297 ~~L~L~~N~l~ 307 (310)
T 4glp_A 297 DNLTLDGNPFL 307 (310)
T ss_dssp SCEECSSTTTS
T ss_pred cEEECcCCCCC
Confidence 55555555554
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2.8e-25 Score=243.15 Aligned_cols=251 Identities=19% Similarity=0.162 Sum_probs=152.5
Q ss_pred EEccCCcCcccCChhhhhccccccEEEccCCccCCCCC----CCCCCcc-ccceeecccccccccCCccccCC-----CC
Q 002883 204 VSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIP----TGVGNLK-NLILIAMEVNLLTGSIPTSVGYL-----LK 273 (871)
Q Consensus 204 L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~----~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l-----~~ 273 (871)
++|++|.+++.+|..+ ...++|++|+|++|.|++..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~~-~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFT-SIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHH-TSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHHH-hCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 4555566654443332 233346666666666665444 4555566 66666666666665555555554 66
Q ss_pred CcEEEccCCCCCCCCCcccC----CC-ccccEEEccCccccccCccccc----C-CCCCCEEecCCCcCCCCCcc----c
Q 002883 274 LQVLSLFGNKISGEIPSSLG----NL-IFLTEVDLQGNSIRGSIPSALG----N-CLQLQKLDLSDNNLSGTIPR----E 339 (871)
Q Consensus 274 L~~L~L~~n~l~~~~~~~~~----~l-~~L~~L~L~~N~i~~~~~~~~~----~-l~~L~~L~L~~N~l~~~~~~----~ 339 (871)
|++|+|++|++++..+..+. .+ ++|++|+|++|+|++..+..+. . .++|++|+|++|++++..+. .
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 77777777777654444333 33 6677777777777655544433 2 24777777777777643332 3
Q ss_pred ccCCC-CCcEEeccCCCCCCCCccccC----CC-CCCCEEeCCCCcCCCC----Cccchhc-ccCCceeeecCCcccccC
Q 002883 340 VIGLS-SFVLLDLSRNHLSGPIPLEVG----RL-KGIQQLDLSENKLSGE----IPTSLAS-CVGLEYLNFSDNSFQGPI 408 (871)
Q Consensus 340 ~~~l~-~L~~L~ls~N~l~~~~~~~~~----~l-~~L~~L~L~~N~l~~~----~~~~~~~-l~~L~~L~L~~N~l~~~~ 408 (871)
+..++ +|++|+|++|.+++..+..++ .+ ++|++|+|++|.|++. ++..+.. .++|++|+|++|+|++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 34444 777777777777655554333 33 4777777777777743 3344444 347777777777777544
Q ss_pred c----cccCCCCCCCEEeCCCCcCCCCCc-------ccccccccccEEecCCCcCccc
Q 002883 409 H----SGFSSLKGLQDLDLSRNNFSGKIP-------MFLNTFRFLQKLNLSFNNLEGE 455 (871)
Q Consensus 409 ~----~~~~~l~~L~~L~l~~N~l~~~~~-------~~~~~~~~L~~L~l~~N~l~~~ 455 (871)
+ ..+..+++|+.|+|++|.+.+..+ ..+..+++|+.||+++|++...
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 4 334666778888888887554333 3566677788888888887765
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=5.6e-24 Score=218.38 Aligned_cols=199 Identities=16% Similarity=0.179 Sum_probs=97.1
Q ss_pred cccEEEccCCccCCCCCCCCCCccccceeeccccc-ccccCCccccCCCCCcEEEccC-CCCCCCCCcccCCCccccEEE
Q 002883 225 HLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNL-LTGSIPTSVGYLLKLQVLSLFG-NKISGEIPSSLGNLIFLTEVD 302 (871)
Q Consensus 225 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~ 302 (871)
+|++|++++|+|+++.+..|.++++|++|++++|. ++...+..|..+++|++|+|++ |+++...+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 46666666666665444455555555555555554 5544444555555555555555 555544444455555555555
Q ss_pred ccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCC-CCCCCCccccCCCCCCC-EEeCCCCcC
Q 002883 303 LQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRN-HLSGPIPLEVGRLKGIQ-QLDLSENKL 380 (871)
Q Consensus 303 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l 380 (871)
+++|++++ +|. |..+++|+ .|++|++++| .+++..+..|..+++|+ .|++++|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~---------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTD---------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCC---------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCCCCCcc-ccc-cccccccc---------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 55555543 332 44444444 0004444444 44433333344444454 555555544
Q ss_pred CCCCccchhcccCCceeeecCCc-ccccCccccCCC-CCCCEEeCCCCcCCCCCcccccccccccEEecCCC
Q 002883 381 SGEIPTSLASCVGLEYLNFSDNS-FQGPIHSGFSSL-KGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFN 450 (871)
Q Consensus 381 ~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N 450 (871)
+...+..|.. ++|++|+|++|+ ++++.+..|.++ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 4222222322 455555555553 554445555555 5555555555555532222 3445555555543
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.5e-25 Score=245.33 Aligned_cols=262 Identities=18% Similarity=0.180 Sum_probs=178.7
Q ss_pred EEecCCCcccccCCccccCCCcCceeeCCCCcccccCC----ccccCCc-ccceeeccCccccCCCCcccccc-----cc
Q 002883 18 ILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIP----QSLSNLS-FLQQLSLSENSLSGNIPSELGLL-----KQ 87 (871)
Q Consensus 18 ~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l-----~~ 87 (871)
.++|++|++++.+|+.+....+|++|+|++|++++..+ +.|..++ +|++|+|++|.+++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46889999998888888777889999999999986666 7788888 89999999999987778888776 88
Q ss_pred ccccccccccccCCCCcccccc-----CCCceeeeecccccccccccccc---C-CCCccEEEccCccCCCCCCccCcCC
Q 002883 88 LNMFQVSANYLTGSIPIQLFNI-----SSMDYFAVTQNKLVGEIPHYVGF---T-LPNIRVLLLGSNWFTGEIPPSISNA 158 (871)
Q Consensus 88 L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~~~~~~~---~-l~~L~~L~l~~n~i~~~~p~~~~~~ 158 (871)
|++|+|++|++++..+..+... ++|++|++++|.+.+..+..+.. . ..+|++|+|++|.+++..+.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~----- 156 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSD----- 156 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHH-----
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHH-----
Confidence 9999999999986666655443 78888888888887544433321 2 25888888888887743221
Q ss_pred CCCCccccCCC-cccEEecccccCCCCCCCCccccccccCC-CcccEEEccCCcCccc----CChhhhhccccccEEEcc
Q 002883 159 SSIPEDLGKLK-NLIRLNFARNNLGTGKGNDLRFLDSLVNC-TFLEVVSLSSNSLSGV----LPNSIANFSSHLIYLYMS 232 (871)
Q Consensus 159 ~~lp~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~l~~l-~~L~~L~L~~n~l~~~----~~~~~~~~~~~L~~L~L~ 232 (871)
.+++.+..++ +|++|+|++|+++...... ....+..+ ++|++|+|++|.+++. ++..+....++|++|+|+
T Consensus 157 -~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~--l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls 233 (362)
T 3goz_A 157 -ELIQILAAIPANVNSLNLRGNNLASKNCAE--LAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLC 233 (362)
T ss_dssp -HHHHHHHTSCTTCCEEECTTSCGGGSCHHH--HHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECC
T ss_pred -HHHHHHhcCCccccEeeecCCCCchhhHHH--HHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECc
Confidence 2344455555 7888888888776543211 11234445 4788888888888743 344444444468888888
Q ss_pred CCccCCCCC----CCCCCccccceeecccccccccC-------CccccCCCCCcEEEccCCCCCCC
Q 002883 233 ANRISGTIP----TGVGNLKNLILIAMEVNLLTGSI-------PTSVGYLLKLQVLSLFGNKISGE 287 (871)
Q Consensus 233 ~n~i~~~~~----~~~~~l~~L~~L~l~~N~l~~~~-------~~~~~~l~~L~~L~L~~n~l~~~ 287 (871)
+|+|++..+ ..+..+++|+.|++++|.+.... +..+..+++|+.||+++|++...
T Consensus 234 ~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 234 LNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp SSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 887775433 23455666777777777644322 22445556666666666666543
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=5.6e-24 Score=218.40 Aligned_cols=197 Identities=17% Similarity=0.219 Sum_probs=159.8
Q ss_pred CcccEEEccCCcCcccCChhhhhccccccEEEccCCc-cCCCCCCCCCCccccceeeccc-ccccccCCccccCCCCCcE
Q 002883 199 TFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANR-ISGTIPTGVGNLKNLILIAMEV-NLLTGSIPTSVGYLLKLQV 276 (871)
Q Consensus 199 ~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~ 276 (871)
++|++|++++|++++..+..+..+ ++|++|++++|+ ++.+.+..|.++++|++|++++ |.+++..+..|..+++|++
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l-~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNL-PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTC-TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcceEECHHHccCC-CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 489999999999996666567666 579999999997 9877778999999999999999 9999888889999999999
Q ss_pred EEccCCCCCCCCCcccCCCcccc---EEEccCc-cccccCcccccCCCCCC-EEecCCCcCCCCCcccccCCCCCcEEec
Q 002883 277 LSLFGNKISGEIPSSLGNLIFLT---EVDLQGN-SIRGSIPSALGNCLQLQ-KLDLSDNNLSGTIPREVIGLSSFVLLDL 351 (871)
Q Consensus 277 L~L~~n~l~~~~~~~~~~l~~L~---~L~L~~N-~i~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l 351 (871)
|++++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ .|++++|+++...+..+.. ++|+.|++
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L 186 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYL 186 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEEC
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEc
Confidence 9999999995 666 88888888 9999999 99977777899999999 9999999998443334444 77888888
Q ss_pred cCCC-CCCCCccccCCC-CCCCEEeCCCCcCCCCCccchhcccCCceeeecCC
Q 002883 352 SRNH-LSGPIPLEVGRL-KGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDN 402 (871)
Q Consensus 352 s~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 402 (871)
++|+ ++...+..|..+ ++|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 187 ~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp TTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 8884 775555667777 777777777777773 3332 4556666666654
No 338
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.1e-23 Score=224.68 Aligned_cols=189 Identities=24% Similarity=0.341 Sum_probs=104.5
Q ss_pred cccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEcc
Q 002883 225 HLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQ 304 (871)
Q Consensus 225 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (871)
+|++|++++|.++. ++ .+..+++|+.|++++|.+++..+ +..+++|++|+|++|++++ + ..+..+++|++|+|+
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-V-SAIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-C-GGGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-c-hhhcCCCCCCEEECC
Confidence 46677777776663 22 45666666666666666664332 5666666666666666653 2 245556666666666
Q ss_pred CccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCC
Q 002883 305 GNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEI 384 (871)
Q Consensus 305 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 384 (871)
+|++++. + .+..+++|+.|++++|++++..+ +..+++|+.|++++|.+++. +. +..+++|+.|++++|++++..
T Consensus 116 ~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~ 189 (308)
T 1h6u_A 116 STQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDIS 189 (308)
T ss_dssp TSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCG
T ss_pred CCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcCh
Confidence 6666532 2 25556666666666666653322 55555566666666555532 22 555555555555555555322
Q ss_pred ccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCC
Q 002883 385 PTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFS 429 (871)
Q Consensus 385 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 429 (871)
+ +..+++|++|+|++|++++..+ +..+++|+.|++++|+++
T Consensus 190 ~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 190 P--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp G--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred h--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 2 4555555555555555554332 455555555555555554
No 339
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=7.1e-23 Score=211.72 Aligned_cols=158 Identities=22% Similarity=0.210 Sum_probs=75.8
Q ss_pred ccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCC
Q 002883 298 LTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSE 377 (871)
Q Consensus 298 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~ 377 (871)
|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 37 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 116 (251)
T 3m19_A 37 TEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116 (251)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCC
Confidence 33344444444333333344444444444444444433333344444444444444444433333444444455555555
Q ss_pred CcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCccc
Q 002883 378 NKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGE 455 (871)
Q Consensus 378 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~ 455 (871)
|+|++..+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|+|+|.
T Consensus 117 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 555443344444555555555555555544444555555555555555555555455555555555555555555554
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=5.9e-23 Score=212.30 Aligned_cols=181 Identities=22% Similarity=0.244 Sum_probs=165.9
Q ss_pred cccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEec
Q 002883 248 KNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDL 327 (871)
Q Consensus 248 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 327 (871)
.+.+.++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 46788999999999 5666554 68999999999999888889999999999999999999888888999999999999
Q ss_pred CCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCccccc
Q 002883 328 SDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGP 407 (871)
Q Consensus 328 ~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 407 (871)
++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999988888899999999999999999977777789999999999999999977777899999999999999999998
Q ss_pred CccccCCCCCCCEEeCCCCcCCCC
Q 002883 408 IHSGFSSLKGLQDLDLSRNNFSGK 431 (871)
Q Consensus 408 ~~~~~~~l~~L~~L~l~~N~l~~~ 431 (871)
.+..|..+++|+.|+|++|++++.
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCC
Confidence 888999999999999999999865
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=5.5e-24 Score=227.57 Aligned_cols=224 Identities=21% Similarity=0.159 Sum_probs=146.0
Q ss_pred cccEEEccCCccCCCCCC---CCCCccccceeecccccccccCCccc--cCCCCCcEEEccCCCCCCCCC----cccCCC
Q 002883 225 HLIYLYMSANRISGTIPT---GVGNLKNLILIAMEVNLLTGSIPTSV--GYLLKLQVLSLFGNKISGEIP----SSLGNL 295 (871)
Q Consensus 225 ~L~~L~L~~n~i~~~~~~---~~~~l~~L~~L~l~~N~l~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~l 295 (871)
.++.|.+.++.++..... .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 367777777776521111 12234567777777777777777776 777777777777777775433 234467
Q ss_pred ccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCC--C--cccccCCCCCcEEeccCCCCCCCCcc----ccCCC
Q 002883 296 IFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGT--I--PREVIGLSSFVLLDLSRNHLSGPIPL----EVGRL 367 (871)
Q Consensus 296 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--~~~~~~l~~L~~L~ls~N~l~~~~~~----~~~~l 367 (871)
++|++|+|++|++.+..+..|..+++|++|+|++|++.+. . +..+..+++|++|+|++|+++ .++. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 7777777777777766667777777777777777776531 1 122356677777777777776 2332 24566
Q ss_pred CCCCEEeCCCCcCCCCCccchhcc---cCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccE
Q 002883 368 KGIQQLDLSENKLSGEIPTSLASC---VGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQK 444 (871)
Q Consensus 368 ~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~ 444 (871)
++|++|+|++|++++..|..+..+ ++|++|+|++|+|+. +|..+. ++|++|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 777777777777776656666555 577777777777773 344443 5777777777777743 33 566677777
Q ss_pred EecCCCcCcc
Q 002883 445 LNLSFNNLEG 454 (871)
Q Consensus 445 L~l~~N~l~~ 454 (871)
|+|++|+|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 7777777763
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.4e-25 Score=246.29 Aligned_cols=232 Identities=18% Similarity=0.215 Sum_probs=158.9
Q ss_pred ccEEEccCCccCCCC----CCCCCCccccceeeccccc---ccccCCccc-------cCCCCCcEEEccCCCCCC----C
Q 002883 226 LIYLYMSANRISGTI----PTGVGNLKNLILIAMEVNL---LTGSIPTSV-------GYLLKLQVLSLFGNKISG----E 287 (871)
Q Consensus 226 L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~l~~N~---l~~~~~~~~-------~~l~~L~~L~L~~n~l~~----~ 287 (871)
|++|+|++|+|+... +..+..+++|+.|+|++|. +++.+|..+ ..+++|++|+|++|+++. .
T Consensus 34 L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~ 113 (386)
T 2ca6_A 34 VKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEP 113 (386)
T ss_dssp CCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHH
T ss_pred ccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHH
Confidence 555555555544332 2224455566666665542 233333333 567778888888887775 2
Q ss_pred CCcccCCCccccEEEccCccccccCccccc----CC---------CCCCEEecCCCcCC-CCCc---ccccCCCCCcEEe
Q 002883 288 IPSSLGNLIFLTEVDLQGNSIRGSIPSALG----NC---------LQLQKLDLSDNNLS-GTIP---REVIGLSSFVLLD 350 (871)
Q Consensus 288 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~----~l---------~~L~~L~L~~N~l~-~~~~---~~~~~l~~L~~L~ 350 (871)
++..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +..+ ..+..+++|++|+
T Consensus 114 l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~ 193 (386)
T 2ca6_A 114 LIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVK 193 (386)
T ss_dssp HHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEE
Confidence 555677777888888888877644333333 33 78888888888886 2333 3566778888888
Q ss_pred ccCCCCCC-----CCccccCCCCCCCEEeCCCCcCC----CCCccchhcccCCceeeecCCccccc----Ccccc--CCC
Q 002883 351 LSRNHLSG-----PIPLEVGRLKGIQQLDLSENKLS----GEIPTSLASCVGLEYLNFSDNSFQGP----IHSGF--SSL 415 (871)
Q Consensus 351 ls~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~--~~l 415 (871)
+++|+++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|++|+|++|+|++. ++..+ +.+
T Consensus 194 L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~ 273 (386)
T 2ca6_A 194 MVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLEN 273 (386)
T ss_dssp CCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSS
T ss_pred CcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccC
Confidence 88888862 23337778888888888888885 46677788888888899988888765 34555 348
Q ss_pred CCCCEEeCCCCcCCC----CCcccc-cccccccEEecCCCcCcccCC
Q 002883 416 KGLQDLDLSRNNFSG----KIPMFL-NTFRFLQKLNLSFNNLEGEVP 457 (871)
Q Consensus 416 ~~L~~L~l~~N~l~~----~~~~~~-~~~~~L~~L~l~~N~l~~~~~ 457 (871)
++|++|+|++|++++ .+|..+ ..+++|++|++++|++++..+
T Consensus 274 ~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 274 IGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 889999999999886 366666 667889999999999886553
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.8e-25 Score=247.22 Aligned_cols=270 Identities=16% Similarity=0.204 Sum_probs=172.3
Q ss_pred CCCccccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcC---cccCChhhhhccccccEEEccCCcc
Q 002883 160 SIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSL---SGVLPNSIANFSSHLIYLYMSANRI 236 (871)
Q Consensus 160 ~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l---~~~~~~~~~~~~~~L~~L~L~~n~i 236 (871)
.++..+..+++|++|+|++|+++..... .....+..+++|++|+|++|.+ ++.+|..+..+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~--~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l-------------- 86 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAAR--WLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLL-------------- 86 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHH--HHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHH--------------
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHH--HHHHHHHhCCCccEEeCcccccCccccchhHHHHHH--------------
Confidence 4566666677777777777766542110 0112355566666666666433 33334333211
Q ss_pred CCCCCCCCCCccccceeecccccccc----cCCccccCCCCCcEEEccCCCCCCCCCcccC----CC---------cccc
Q 002883 237 SGTIPTGVGNLKNLILIAMEVNLLTG----SIPTSVGYLLKLQVLSLFGNKISGEIPSSLG----NL---------IFLT 299 (871)
Q Consensus 237 ~~~~~~~~~~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l---------~~L~ 299 (871)
...+..+++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+. .+ ++|+
T Consensus 87 ----~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~ 162 (386)
T 2ca6_A 87 ----LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLR 162 (386)
T ss_dssp ----HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred ----HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCc
Confidence 0123455666666666666664 2455566677777777777777533333332 23 6778
Q ss_pred EEEccCcccc-ccCc---ccccCCCCCCEEecCCCcCCC-----CCcccccCCCCCcEEeccCCCCC----CCCccccCC
Q 002883 300 EVDLQGNSIR-GSIP---SALGNCLQLQKLDLSDNNLSG-----TIPREVIGLSSFVLLDLSRNHLS----GPIPLEVGR 366 (871)
Q Consensus 300 ~L~L~~N~i~-~~~~---~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~ls~N~l~----~~~~~~~~~ 366 (871)
+|+|++|+++ ...+ ..+..+++|+.|+|++|+|+. ..+..+..+++|+.|+|++|.++ ..+|..+..
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 8888888776 2333 356677788888888888762 23346777888888888888885 456777888
Q ss_pred CCCCCEEeCCCCcCCCC----Cccchhc--ccCCceeeecCCcccc----cCcccc-CCCCCCCEEeCCCCcCCCCCc--
Q 002883 367 LKGIQQLDLSENKLSGE----IPTSLAS--CVGLEYLNFSDNSFQG----PIHSGF-SSLKGLQDLDLSRNNFSGKIP-- 433 (871)
Q Consensus 367 l~~L~~L~L~~N~l~~~----~~~~~~~--l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~l~~N~l~~~~~-- 433 (871)
+++|++|+|++|.+++. ++..+.. +++|++|+|++|+|++ ..+..+ .++++|++|++++|++++..+
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~ 322 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVV 322 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHH
Confidence 88888888888888754 4555533 8889999999999987 355555 668999999999999997664
Q ss_pred c-cccccccccEEecCC
Q 002883 434 M-FLNTFRFLQKLNLSF 449 (871)
Q Consensus 434 ~-~~~~~~~L~~L~l~~ 449 (871)
. ....+++++.+++..
T Consensus 323 ~~l~~~l~~~~~~~l~~ 339 (386)
T 2ca6_A 323 DEIREVFSTRGRGELDE 339 (386)
T ss_dssp HHHHHHHHHHTCCEECC
T ss_pred HHHHHHhhhcCcchhhh
Confidence 2 233355555555533
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=6.2e-23 Score=223.30 Aligned_cols=239 Identities=21% Similarity=0.209 Sum_probs=139.6
Q ss_pred cEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccC-CccccCCCCCcE-EEc
Q 002883 202 EVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSI-PTSVGYLLKLQV-LSL 279 (871)
Q Consensus 202 ~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~-L~L 279 (871)
++++.++++++ .+|..+. .++++|+|++|+|+.+.+..|.++++|++|+|++|.+.+.+ +.+|.+++++++ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~---~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC---TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC---CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 45667777776 5565542 45777777777777555566777777777777777765433 345667766554 555
Q ss_pred cCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCC-CcCCCCCcccccCCC-CCcEEeccCCCCC
Q 002883 280 FGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSD-NNLSGTIPREVIGLS-SFVLLDLSRNHLS 357 (871)
Q Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~ls~N~l~ 357 (871)
++|+|+...|+.|..+++|++|++++|+|+...+..+....++..|++.+ |++....+..|.++. .++.|+|++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 56777766666777777777777777777755555566666666676644 455544444555543 4566666666666
Q ss_pred CCCccccCCCCCCCEEeCCC-CcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccc
Q 002883 358 GPIPLEVGRLKGIQQLDLSE-NKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFL 436 (871)
Q Consensus 358 ~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 436 (871)
.++.......+|+.|++++ |.++...++.|..+++|++|+|++|+|+.+++..|.++++|+.+++ ++++ .+| .+
T Consensus 168 -~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l 242 (350)
T 4ay9_X 168 -EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TL 242 (350)
T ss_dssp -EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CT
T ss_pred -CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-Cc
Confidence 3333333445566666653 4555333345566666666666666666554444433333322221 2233 334 24
Q ss_pred cccccccEEecCC
Q 002883 437 NTFRFLQKLNLSF 449 (871)
Q Consensus 437 ~~~~~L~~L~l~~ 449 (871)
..+++|+.+++++
T Consensus 243 ~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 243 EKLVALMEASLTY 255 (350)
T ss_dssp TTCCSCCEEECSC
T ss_pred hhCcChhhCcCCC
Confidence 4555555555543
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=1.7e-22 Score=215.46 Aligned_cols=210 Identities=25% Similarity=0.367 Sum_probs=134.0
Q ss_pred EEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCcc
Q 002883 228 YLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNS 307 (871)
Q Consensus 228 ~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 307 (871)
.+.+..+.+++.. .+.++++|+.|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|++|+|++|+
T Consensus 23 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 23 KIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (308)
T ss_dssp HHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCc
Confidence 3345555554322 24556677777777777763 33 46667777777777777764333 6677777777777777
Q ss_pred ccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccc
Q 002883 308 IRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTS 387 (871)
Q Consensus 308 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 387 (871)
+++. + .+..+++|+.|++++|++++ ++ .+..+++|++|++++|.+++..+ ++.+++|+.|++++|.+++ ++.
T Consensus 97 l~~~-~-~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~- 168 (308)
T 1h6u_A 97 LKNV-S-AIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP- 168 (308)
T ss_dssp CSCC-G-GGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-
T ss_pred CCCc-h-hhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-
Confidence 7642 2 46667777777777777764 33 26667777777777777764332 6667777777777777764 333
Q ss_pred hhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCccc
Q 002883 388 LASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGE 455 (871)
Q Consensus 388 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~ 455 (871)
+..+++|+.|++++|++++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++.
T Consensus 169 l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 169 LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 6667777777777777765443 6667777777777777764332 66677777777777777653
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=4.6e-23 Score=224.34 Aligned_cols=250 Identities=19% Similarity=0.156 Sum_probs=200.5
Q ss_pred ccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCC-CcccCCCccccE-EEc
Q 002883 226 LIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEI-PSSLGNLIFLTE-VDL 303 (871)
Q Consensus 226 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~-L~L 303 (871)
-+.++.++++++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+ +..|.++++|++ +.+
T Consensus 11 ~~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 11 NRVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TTEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CCEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 357899999999 667666 368999999999999777788999999999999999986544 457899998776 667
Q ss_pred cCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccC-CCCCCCCccccCCCC-CCCEEeCCCCcCC
Q 002883 304 QGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSR-NHLSGPIPLEVGRLK-GIQQLDLSENKLS 381 (871)
Q Consensus 304 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~-N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 381 (871)
++|+|+.+.|..|..+++|++|++++|+|+...+..+....++..|++++ |.+....+..|..+. .++.|+|++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 78999988899999999999999999999977777778888899999966 677755566677765 6899999999999
Q ss_pred CCCccchhcccCCceeeec-CCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCCc
Q 002883 382 GEIPTSLASCVGLEYLNFS-DNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEG 460 (871)
Q Consensus 382 ~~~~~~~~~l~~L~~L~L~-~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~ 460 (871)
.+ +.......+|++|+++ +|.++.+.+..|.++++|++|||++|+|+...+..+..+++|+.+++ +.++ ..|...
T Consensus 168 ~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP~l~ 243 (350)
T 4ay9_X 168 EI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLPTLE 243 (350)
T ss_dssp EE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCCCTT
T ss_pred CC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCCCch
Confidence 54 4444456789999997 47888777788999999999999999999666655655554444333 3344 455566
Q ss_pred ccccccceeccCCCCCccCCCcc
Q 002883 461 VFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 461 ~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
.+++++.+++ .|++.|.+-..|
T Consensus 244 ~l~~L~~l~l-~~~~~c~~~~~~ 265 (350)
T 4ay9_X 244 KLVALMEASL-TYPSHCCAFANW 265 (350)
T ss_dssp TCCSCCEEEC-SCHHHHHHHHHS
T ss_pred hCcChhhCcC-CCCccccchhhh
Confidence 7888888887 588889775544
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=5.1e-24 Score=231.03 Aligned_cols=252 Identities=18% Similarity=0.214 Sum_probs=196.1
Q ss_pred cccEEEccCCcCcccCChhhhhc-cccccEEEccCCccCCCCCCCCCCccccceeeccccccccc-CCccccCCCCCcEE
Q 002883 200 FLEVVSLSSNSLSGVLPNSIANF-SSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGS-IPTSVGYLLKLQVL 277 (871)
Q Consensus 200 ~L~~L~L~~n~l~~~~~~~~~~~-~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L 277 (871)
.++.+++++|.+. +..+..+ ..+++.|++++|.+++..+. +..+++|++|++++|.+++. .+..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4788899988876 3444444 14699999999999866554 56789999999999998855 67778889999999
Q ss_pred EccCCCCCCCCCcccCCCccccEEEccCc-ccccc-CcccccCCCCCCEEecCCC-cCCCC-CcccccCCC-CCcEEecc
Q 002883 278 SLFGNKISGEIPSSLGNLIFLTEVDLQGN-SIRGS-IPSALGNCLQLQKLDLSDN-NLSGT-IPREVIGLS-SFVLLDLS 352 (871)
Q Consensus 278 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N-~i~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~ls 352 (871)
+|++|++++..+..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999988777888888999999999999 67642 5666788899999999999 88753 566778888 99999999
Q ss_pred CC--CCC-CCCccccCCCCCCCEEeCCCCc-CCCCCccchhcccCCceeeecCCc-ccccCccccCCCCCCCEEeCCCCc
Q 002883 353 RN--HLS-GPIPLEVGRLKGIQQLDLSENK-LSGEIPTSLASCVGLEYLNFSDNS-FQGPIHSGFSSLKGLQDLDLSRNN 427 (871)
Q Consensus 353 ~N--~l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~ 427 (871)
+| .++ +.++..+..+++|+.|++++|. +++..+..+..+++|++|++++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 454 3456677788999999999998 776777788888999999999985 33332335778899999999988
Q ss_pred CCCCCccccccc-ccccEEecCCCcCcccCCCC
Q 002883 428 FSGKIPMFLNTF-RFLQKLNLSFNNLEGEVPSE 459 (871)
Q Consensus 428 l~~~~~~~~~~~-~~L~~L~l~~N~l~~~~~~~ 459 (871)
++ ...+..+ .+++.|++++|.+++..|..
T Consensus 283 i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 283 VP---DGTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp SC---TTCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred cC---HHHHHHHHhhCcceEEecccCccccCCc
Confidence 44 2233444 34777778999998877654
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1e-23 Score=228.74 Aligned_cols=236 Identities=19% Similarity=0.242 Sum_probs=120.3
Q ss_pred ccCC--CcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCccc-CChhhhhccccccEEEccCCccCCCCC
Q 002883 165 LGKL--KNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGV-LPNSIANFSSHLIYLYMSANRISGTIP 241 (871)
Q Consensus 165 ~~~l--~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~~~~~L~~L~L~~n~i~~~~~ 241 (871)
+..+ ++++.|++++|.+.... ..+..+++|++|+|++|.+++. ++..+..+ ++|++|+|++|++++..+
T Consensus 64 ~~~~~~~~l~~L~l~~n~l~~~~-------~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~-~~L~~L~L~~~~l~~~~~ 135 (336)
T 2ast_B 64 TGRLLSQGVIAFRCPRSFMDQPL-------AEHFSPFRVQHMDLSNSVIEVSTLHGILSQC-SKLQNLSLEGLRLSDPIV 135 (336)
T ss_dssp HHHHHHTTCSEEECTTCEECSCC-------CSCCCCBCCCEEECTTCEECHHHHHHHHTTB-CCCSEEECTTCBCCHHHH
T ss_pred HHhhhhccceEEEcCCccccccc-------hhhccCCCCCEEEccCCCcCHHHHHHHHhhC-CCCCEEeCcCcccCHHHH
Confidence 4444 55666666666555432 1233456666666666666533 44444444 356666666666655555
Q ss_pred CCCCCccccceeecccc-ccccc-CCccccCCCCCcEEEccCC-CCCCC-CCcccCCCc-cccEEEccCcc--cc-ccCc
Q 002883 242 TGVGNLKNLILIAMEVN-LLTGS-IPTSVGYLLKLQVLSLFGN-KISGE-IPSSLGNLI-FLTEVDLQGNS--IR-GSIP 313 (871)
Q Consensus 242 ~~~~~l~~L~~L~l~~N-~l~~~-~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~-~L~~L~L~~N~--i~-~~~~ 313 (871)
..++.+++|++|++++| .+++. .+..+..+++|++|+|++| .+++. .+..+..++ +|++|+|++|. ++ +.++
T Consensus 136 ~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~ 215 (336)
T 2ast_B 136 NTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLS 215 (336)
T ss_dssp HHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHH
T ss_pred HHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHH
Confidence 55555666666666665 44431 3344555666666666666 55532 344455555 66666666663 32 2334
Q ss_pred ccccCCCCCCEEecCCCc-CCCCCcccccCCCCCcEEeccCCC-CCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcc
Q 002883 314 SALGNCLQLQKLDLSDNN-LSGTIPREVIGLSSFVLLDLSRNH-LSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASC 391 (871)
Q Consensus 314 ~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 391 (871)
..+..+++|+.|++++|. +++..+..+..+++|++|++++|. +.......++.+++|+.|++++| ++ ...+..+
T Consensus 216 ~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l 291 (336)
T 2ast_B 216 TLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLL 291 (336)
T ss_dssp HHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHH
T ss_pred HHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHH
Confidence 444555566666666665 444444455555555555555553 22111123445555555555555 32 1122222
Q ss_pred -cCCceeeecCCcccccCcccc
Q 002883 392 -VGLEYLNFSDNSFQGPIHSGF 412 (871)
Q Consensus 392 -~~L~~L~L~~N~l~~~~~~~~ 412 (871)
.+|..|++++|++++..|..+
T Consensus 292 ~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 292 KEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp HHHSTTSEESCCCSCCTTCSSC
T ss_pred HhhCcceEEecccCccccCCcc
Confidence 124444455555554444443
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.3e-22 Score=212.48 Aligned_cols=150 Identities=20% Similarity=0.125 Sum_probs=119.3
Q ss_pred HHHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc------------------chHHHHHHHHHHHHcCCC
Q 002883 554 LLKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR------------------GASKSFIAECEALRSIRH 615 (871)
Q Consensus 554 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h 615 (871)
+......|.+.+.||+|+||.||+|++ .+++.||+|+++.... .....+.+|++++++++|
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 334455677889999999999999999 6899999999954321 124568899999999984
Q ss_pred CccceeeeeecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 002883 616 RNLVKIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695 (871)
Q Consensus 616 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 695 (871)
+++.+++.. +..|+||||++|++|.+ +.. .....++.|++.||.|||+. ||+||
T Consensus 164 ---~~v~~~~~~------~~~~lvmE~~~g~~L~~-l~~-------------~~~~~i~~qi~~~l~~lH~~---giiHr 217 (282)
T 1zar_A 164 ---LAVPKVYAW------EGNAVLMELIDAKELYR-VRV-------------ENPDEVLDMILEEVAKFYHR---GIVHG 217 (282)
T ss_dssp ---SSSCCEEEE------ETTEEEEECCCCEEGGG-CCC-------------SCHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred ---CCcCeEEec------cceEEEEEecCCCcHHH-cch-------------hhHHHHHHHHHHHHHHHHHC---CCEeC
Confidence 555554422 44699999999999998 421 12346999999999999999 99999
Q ss_pred CCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCccccc
Q 002883 696 DLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA 747 (871)
Q Consensus 696 Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 747 (871)
||||+|||++ ++.+||+|||+|.. +..|+|||++.
T Consensus 218 Dlkp~NILl~-~~~vkl~DFG~a~~----------------~~~~~a~e~l~ 252 (282)
T 1zar_A 218 DLSQYNVLVS-EEGIWIIDFPQSVE----------------VGEEGWREILE 252 (282)
T ss_dssp CCSTTSEEEE-TTEEEECCCTTCEE----------------TTSTTHHHHHH
T ss_pred CCCHHHEEEE-CCcEEEEECCCCeE----------------CCCCCHHHHHH
Confidence 9999999999 99999999999974 33467888754
No 350
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=2e-21 Score=196.03 Aligned_cols=182 Identities=19% Similarity=0.201 Sum_probs=122.4
Q ss_pred cEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCc-ccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCC
Q 002883 299 TEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIP-REVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSE 377 (871)
Q Consensus 299 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~ 377 (871)
+.+++++|.++ .+|..+. ..++.|+|++|+|++..+ ..|..+++|+.|+|++|.|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 35555555555 2343332 334566666666664433 3456666666666666666655555677777777777777
Q ss_pred CcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCC
Q 002883 378 NKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVP 457 (871)
Q Consensus 378 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 457 (871)
|++++..+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..|..+..+++|+.|+|++|+|.|.++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 77776666677778888888888888887777888888888888888888887778888888888888888888888776
Q ss_pred CCcccccccceeccCCCCCccCCCcc
Q 002883 458 SEGVFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 458 ~~~~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
..+....++...+...+..|..|...
T Consensus 171 l~~l~~~~~~~~~~~~~~~C~~P~~l 196 (220)
T 2v70_A 171 LAWLGEWLRKKRIVTGNPRCQKPYFL 196 (220)
T ss_dssp GHHHHHHHHHSCCBCCCCEEEESGGG
T ss_pred hHHHHHHHHhcCccccCCccCCChHH
Confidence 44332223222232333467777654
No 351
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=2.4e-21 Score=195.49 Aligned_cols=182 Identities=20% Similarity=0.251 Sum_probs=113.4
Q ss_pred cEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCC
Q 002883 299 TEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSEN 378 (871)
Q Consensus 299 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N 378 (871)
+.+++++|.++ .+|..+. ++|+.|++++|+|++..+..|..+++|+.|+|++|.|++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 34455555554 3333332 45556666666665544555556666666666666666555666666666666777777
Q ss_pred cCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCC
Q 002883 379 KLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPS 458 (871)
Q Consensus 379 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~ 458 (871)
+|+...+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|+|.|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l 170 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHL 170 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCcc
Confidence 66655555566777777777777777777777777777888888888888777677777788888888888888876653
Q ss_pred CcccccccceeccCCCCCccCCCcc
Q 002883 459 EGVFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 459 ~~~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
.+....+....+......|..|...
T Consensus 171 ~~l~~~l~~~~~~~~~~~C~~P~~l 195 (220)
T 2v9t_B 171 KWLADYLHTNPIETSGARCTSPRRL 195 (220)
T ss_dssp HHHHHHHHHCCCBCSCCBEEESGGG
T ss_pred HHHHHHHHhCCCCccCCCcCCchHH
Confidence 3222222222233344556666544
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=6.5e-21 Score=190.90 Aligned_cols=151 Identities=21% Similarity=0.198 Sum_probs=74.0
Q ss_pred cEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccC
Q 002883 202 EVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFG 281 (871)
Q Consensus 202 ~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 281 (871)
+.++++++.++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|+|++
T Consensus 10 ~~v~c~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGIP---AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCcc-CCCCCCC---CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 34555555554 3343322 2456666666666544444455555555555555555544444445555555555555
Q ss_pred CCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCC
Q 002883 282 NKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHL 356 (871)
Q Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l 356 (871)
|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|.+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 160 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 160 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCe
Confidence 555543334444555555555555555544444444444555555555544433333344444444444444433
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=1.3e-20 Score=188.62 Aligned_cols=178 Identities=23% Similarity=0.247 Sum_probs=90.9
Q ss_pred cEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCc
Q 002883 227 IYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGN 306 (871)
Q Consensus 227 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (871)
+.++++++.++ .+|..+ .++|++|++++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45666666665 333322 235555666666555444444555555555555555555444444555555555555555
Q ss_pred cccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCcc
Q 002883 307 SIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPT 386 (871)
Q Consensus 307 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 386 (871)
++++..+..|..+++|++|++++|+|++..+..|..+++|++|++++|.+++..+..+..+++|+.|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 5554444445555555555555555554444444555555555555555554333344455555555555554432
Q ss_pred chhcccCCceeeecCCcccccCccccCC
Q 002883 387 SLASCVGLEYLNFSDNSFQGPIHSGFSS 414 (871)
Q Consensus 387 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 414 (871)
.+++|+.|+++.|++++.+|..++.
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCcc
Confidence 1234444444444444444444443
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.2e-20 Score=215.40 Aligned_cols=188 Identities=22% Similarity=0.341 Sum_probs=100.9
Q ss_pred cccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEcc
Q 002883 225 HLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQ 304 (871)
Q Consensus 225 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (871)
+|+.|+|++|+|++ +|..+. ++|+.|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 34445555554443 333221 44555555555554 233 234555555555555553 343 333 56666666
Q ss_pred CccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCC
Q 002883 305 GNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEI 384 (871)
Q Consensus 305 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 384 (871)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|.|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 666654 333 35566666666666653 333 34566666666666663 444 44 56666666666666 44
Q ss_pred ccchhcccCC-------ceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccc
Q 002883 385 PTSLASCVGL-------EYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFR 440 (871)
Q Consensus 385 ~~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 440 (871)
|. |.. +| +.|+|++|+|+. +|..+..+++|+.|+|++|++++.+|..+..+.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 44 433 44 666677666663 444444566777777777777666666655543
No 355
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=9e-21 Score=207.04 Aligned_cols=180 Identities=23% Similarity=0.207 Sum_probs=110.5
Q ss_pred cEEEccCCCCCCCCCcccCCCccccEEEccCccccccCccccc-CCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccC
Q 002883 275 QVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALG-NCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSR 353 (871)
Q Consensus 275 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 353 (871)
+.+++++|+++ .+|..+. ..++.|+|++|+|++..+..|. ++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 34555555555 3343332 2355566666666555555554 566666666666666655555566666666666666
Q ss_pred CCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCcccc---CCCCCCCEEeCCCCcCCC
Q 002883 354 NHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGF---SSLKGLQDLDLSRNNFSG 430 (871)
Q Consensus 354 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~l~~N~l~~ 430 (871)
|+|+...+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+++.+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 66654445556666666666666666665556666666777777777777766555555 457778888888888876
Q ss_pred CCcccccccccc--cEEecCCCcCcccCC
Q 002883 431 KIPMFLNTFRFL--QKLNLSFNNLEGEVP 457 (871)
Q Consensus 431 ~~~~~~~~~~~L--~~L~l~~N~l~~~~~ 457 (871)
..+..+..++.+ +.|+|++|+|.|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred cCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 666667666663 667777777776553
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1e-20 Score=199.76 Aligned_cols=171 Identities=25% Similarity=0.299 Sum_probs=90.1
Q ss_pred CCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEE
Q 002883 270 YLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLL 349 (871)
Q Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 349 (871)
.+++|+.|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|+.|++++|++++ ++ .+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 34444444444444442 22 24444444444444444443222 4445555555555555542 22 24555555555
Q ss_pred eccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCC
Q 002883 350 DLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFS 429 (871)
Q Consensus 350 ~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 429 (871)
++++|++++. ..+..+++|+.|++++|++++. ..+..+++|++|+|++|++++..+ +..+++|+.|++++|+++
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 5555555532 2455555666666666666532 445566666666666666665443 566666666666666666
Q ss_pred CCCcccccccccccEEecCCCcCcc
Q 002883 430 GKIPMFLNTFRFLQKLNLSFNNLEG 454 (871)
Q Consensus 430 ~~~~~~~~~~~~L~~L~l~~N~l~~ 454 (871)
+ ++ .+..+++|+.|++++|+++.
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred C-Ch-hhccCCCCCEEECcCCcccC
Confidence 3 33 25666666666666666654
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.2e-20 Score=205.90 Aligned_cols=181 Identities=24% Similarity=0.194 Sum_probs=156.5
Q ss_pred ccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCccccc-CCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCC
Q 002883 298 LTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVI-GLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLS 376 (871)
Q Consensus 298 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~ 376 (871)
-+.+++++|.++ .+|..+. +.++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 368999999999 5676554 5689999999999987777787 99999999999999997777889999999999999
Q ss_pred CCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccc---cccccccEEecCCCcCc
Q 002883 377 ENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFL---NTFRFLQKLNLSFNNLE 453 (871)
Q Consensus 377 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~---~~~~~L~~L~l~~N~l~ 453 (871)
+|+|++..+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|+|++..+..+ ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998878889999999999999999999999999999999999999999997666666 67999999999999999
Q ss_pred ccCCCC-ccccc--ccceeccCCCCCccCCC
Q 002883 454 GEVPSE-GVFKN--VRAVSIIGNNKLCGGSP 481 (871)
Q Consensus 454 ~~~~~~-~~~~~--l~~l~l~~N~~~C~~~~ 481 (871)
..++.. ..++. ++.+++.+|||.|+|..
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 755422 22333 36799999999999864
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=1.4e-20 Score=217.53 Aligned_cols=190 Identities=25% Similarity=0.347 Sum_probs=106.9
Q ss_pred ccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccC
Q 002883 226 LIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQG 305 (871)
Q Consensus 226 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (871)
+..+.++.+.+.+..+ +..|++|+.|++++|.|... + .+..+++|+.|+|++|+|++..+ +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3334444444443222 34455555555555555522 2 35555666666666666653332 55566666666666
Q ss_pred ccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 306 NSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIP 385 (871)
Q Consensus 306 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 385 (871)
|+|++ ++ .+..+++|+.|+|++|+|++ + ..+..+++|+.|+|++|.+++. ..++.+++|+.|+|++|.|++..|
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 66653 22 45566666666666666653 2 2355566666666666666533 455666666666666666664433
Q ss_pred cchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCC
Q 002883 386 TSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGK 431 (871)
Q Consensus 386 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 431 (871)
+..+++|+.|+|++|+|+++ ..+..+++|+.|+|++|++++.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 66666666666666666643 2466666666666666666643
No 359
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=6.4e-20 Score=209.50 Aligned_cols=188 Identities=21% Similarity=0.281 Sum_probs=159.1
Q ss_pred CCCCcc-----ccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCccccc
Q 002883 243 GVGNLK-----NLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALG 317 (871)
Q Consensus 243 ~~~~l~-----~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 317 (871)
.+.+++ +|+.|+|++|.+++ +|..+ .++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.
T Consensus 49 ~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~ 119 (571)
T 3cvr_A 49 AVSLLKECLINQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LP 119 (571)
T ss_dssp HHHHHHHHHHTTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CC
T ss_pred hhhhccccccCCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hh
Confidence 355555 89999999999996 66655 378999999999999 566 557999999999999996 666 66
Q ss_pred CCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCcee
Q 002883 318 NCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYL 397 (871)
Q Consensus 318 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 397 (871)
. +|+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|
T Consensus 120 ~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L 185 (571)
T 3cvr_A 120 A--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEAL 185 (571)
T ss_dssp T--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEE
T ss_pred c--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEE
Confidence 5 99999999999996 665 68999999999999995 565 57899999999999995 666 65 899999
Q ss_pred eecCCcccccCccccCCCCCC-------CEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCC
Q 002883 398 NFSDNSFQGPIHSGFSSLKGL-------QDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPS 458 (871)
Q Consensus 398 ~L~~N~l~~~~~~~~~~l~~L-------~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~ 458 (871)
+|++|+|+.+ |. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++..|.
T Consensus 186 ~Ls~N~L~~l-p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 186 DVSTNLLESL-PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp ECCSSCCSSC-CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred ECcCCCCCch-hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 9999999954 44 554 77 99999999999 5788788899999999999999987664
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=3.7e-20 Score=195.38 Aligned_cols=171 Identities=26% Similarity=0.362 Sum_probs=88.3
Q ss_pred CccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEE
Q 002883 246 NLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKL 325 (871)
Q Consensus 246 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 325 (871)
.+++|+.|++++|.++.. ..+..+++|++|+|++|++++..+ +..+++|++|+|++|++++ ++ .+..+++|+.|
T Consensus 44 ~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 344444444444444422 124444555555555555543222 4555555555555555542 22 25555555555
Q ss_pred ecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCccc
Q 002883 326 DLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQ 405 (871)
Q Consensus 326 ~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 405 (871)
++++|++++. ..+..+++|+.|++++|.+++. ..++.+++|+.|++++|++++..+ +..+++|++|+|++|+|+
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 5555555532 2355555555555555555532 345556666666666666653322 555666666666666665
Q ss_pred ccCccccCCCCCCCEEeCCCCcCCC
Q 002883 406 GPIHSGFSSLKGLQDLDLSRNNFSG 430 (871)
Q Consensus 406 ~~~~~~~~~l~~L~~L~l~~N~l~~ 430 (871)
+. + .+..+++|+.|++++|+++.
T Consensus 192 ~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 192 DL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp BC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CC-h-hhccCCCCCEEECcCCcccC
Confidence 43 2 25666666666666666654
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=7.3e-20 Score=184.53 Aligned_cols=153 Identities=28% Similarity=0.376 Sum_probs=95.4
Q ss_pred cEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCC
Q 002883 275 QVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRN 354 (871)
Q Consensus 275 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N 354 (871)
+.++++++.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 34555555555 3343332 45556666666665555555666666666666666666555566666666666666666
Q ss_pred CCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCC
Q 002883 355 HLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSG 430 (871)
Q Consensus 355 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 430 (871)
.|+...+..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|++..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 6664444445666666666677776666666667677777777777777776666667777777777777777764
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.2e-19 Score=182.99 Aligned_cols=156 Identities=20% Similarity=0.256 Sum_probs=106.6
Q ss_pred cEEEccCCCCCCCCCcccCCCccccEEEccCccccccCc-ccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccC
Q 002883 275 QVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIP-SALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSR 353 (871)
Q Consensus 275 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 353 (871)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..+ ..|..+++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 35666666665 3444332 234566666666665433 3466667777777777777666666677777777777777
Q ss_pred CCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 354 NHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIP 433 (871)
Q Consensus 354 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 433 (871)
|.+++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 77776666667777777777777777776667777777777777787777777777777788888888888888775443
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=6.6e-20 Score=211.94 Aligned_cols=196 Identities=23% Similarity=0.272 Sum_probs=171.4
Q ss_pred CccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEE
Q 002883 246 NLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKL 325 (871)
Q Consensus 246 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 325 (871)
.+.++..+.+..+.+.... .+..+++|+.|++++|.|.. ++ .+..+++|+.|+|++|+|++..+ +..+++|+.|
T Consensus 19 ~l~~l~~l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHHHHHHHhccCCCccccc--chhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 3566777888888888543 35789999999999999984 44 58999999999999999996655 8999999999
Q ss_pred ecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCccc
Q 002883 326 DLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQ 405 (871)
Q Consensus 326 ~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 405 (871)
+|++|.|++ ++ .+..+++|+.|+|++|.+++ + ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|+|+
T Consensus 93 ~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 93 FLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 166 (605)
T ss_dssp ECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCC
T ss_pred ECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCC
Confidence 999999984 44 78999999999999999995 3 4689999999999999999954 67999999999999999999
Q ss_pred ccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCC
Q 002883 406 GPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVP 457 (871)
Q Consensus 406 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 457 (871)
+..+ +..+++|+.|+|++|+|++. | .+..+++|+.|+|++|++++.+.
T Consensus 167 ~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 167 DIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECCCC
T ss_pred Cchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCCcc
Confidence 8766 99999999999999999954 4 68999999999999999987643
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=3.4e-19 Score=180.95 Aligned_cols=155 Identities=23% Similarity=0.212 Sum_probs=89.3
Q ss_pred cEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCC
Q 002883 299 TEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSEN 378 (871)
Q Consensus 299 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N 378 (871)
+.++.++++++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 34445555544 3333222 45555555555555444555555555555555555555333444555566666666666
Q ss_pred cCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCC
Q 002883 379 KLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVP 457 (871)
Q Consensus 379 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 457 (871)
+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+++|+.|++++|++.|.++
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 665444455556666666666666666 345555666666666666666665555566666777777777777776654
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=1.4e-18 Score=176.45 Aligned_cols=156 Identities=21% Similarity=0.271 Sum_probs=114.6
Q ss_pred CcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccC
Q 002883 274 LQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSR 353 (871)
Q Consensus 274 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 353 (871)
-+.++.+++.++ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 455666666666 4444332 5677777777777766666677777777777777777655555667777777777777
Q ss_pred CCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 354 NHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIP 433 (871)
Q Consensus 354 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 433 (871)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.+..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 7777655666777888888888888887 677778888888888888888887777778888889999999998886543
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=6.2e-21 Score=219.34 Aligned_cols=204 Identities=22% Similarity=0.211 Sum_probs=111.9
Q ss_pred cCCCcCceeeCCCCcccccCCccccCCcccceeeccCcc-------------ccCCCCccccccccccccc-cccccccC
Q 002883 35 GNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENS-------------LSGNIPSELGLLKQLNMFQ-VSANYLTG 100 (871)
Q Consensus 35 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-------------l~~~~~~~~~~l~~L~~L~-l~~n~l~~ 100 (871)
..+++|+.|+|++|+++ .+|++++++++|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45566666666666666 566666666666666665554 2334444555555555555 4444332
Q ss_pred CCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEeccccc
Q 002883 101 SIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNN 180 (871)
Q Consensus 101 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~ 180 (871)
+|..+.+++|.+. .+|. ..|+.|+|++|.|+ .+|.
T Consensus 424 ----------~L~~l~l~~n~i~-~l~~------~~L~~L~Ls~n~l~-----------~lp~----------------- 458 (567)
T 1dce_A 424 ----------DLRSKFLLENSVL-KMEY------ADVRVLHLAHKDLT-----------VLCH----------------- 458 (567)
T ss_dssp ----------HHHHHHHHHHHHH-HHHH------TTCSEEECTTSCCS-----------SCCC-----------------
T ss_pred ----------hhhhhhhhccccc-ccCc------cCceEEEecCCCCC-----------CCcC-----------------
Confidence 2333444444443 1211 12445555555444 2332
Q ss_pred CCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccc
Q 002883 181 LGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLL 260 (871)
Q Consensus 181 l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l 260 (871)
+..+++|++|+|++|.|+ .+|..+..+ ++|+.|+|++|+|++ +| .++++++|+.|+|++|.|
T Consensus 459 --------------~~~l~~L~~L~Ls~N~l~-~lp~~~~~l-~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l 520 (567)
T 1dce_A 459 --------------LEQLLLVTHLDLSHNRLR-ALPPALAAL-RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRL 520 (567)
T ss_dssp --------------GGGGTTCCEEECCSSCCC-CCCGGGGGC-TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCC
T ss_pred --------------ccccccCcEeecCccccc-ccchhhhcC-CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCC
Confidence 344455555555555555 455555555 346666666666664 34 566666666666666666
Q ss_pred cccC-CccccCCCCCcEEEccCCCCCCCCCcc---cCCCccccEEEc
Q 002883 261 TGSI-PTSVGYLLKLQVLSLFGNKISGEIPSS---LGNLIFLTEVDL 303 (871)
Q Consensus 261 ~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~l~~L~~L~L 303 (871)
++.. |..|+.+++|+.|+|++|++++..+.. +..+++|+.|++
T Consensus 521 ~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 521 QQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 6554 666777777777777777776433321 223566666653
No 367
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=4.3e-19 Score=174.81 Aligned_cols=157 Identities=24% Similarity=0.326 Sum_probs=76.2
Q ss_pred CEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCcc-ccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecC
Q 002883 323 QKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPL-EVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSD 401 (871)
Q Consensus 323 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 401 (871)
+.+++++|+++ .+|..+.. +|++|++++|.+++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 34444444443 33333221 444455555544433322 244555555555555555544455555555555555555
Q ss_pred CcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCCcccccccceeccCCCCCccCCC
Q 002883 402 NSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGGSP 481 (871)
Q Consensus 402 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~~~ 481 (871)
|+|++..+..|..+++|++|+|++|+|++..|..+..+++|++|+|++|+|+|.++..+....++...+.++...|+.|+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 55555555555555555555555555555555555555555555555555555544322222233333344444555444
Q ss_pred c
Q 002883 482 E 482 (871)
Q Consensus 482 ~ 482 (871)
.
T Consensus 168 ~ 168 (192)
T 1w8a_A 168 K 168 (192)
T ss_dssp T
T ss_pred H
Confidence 3
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=2.9e-19 Score=185.48 Aligned_cols=167 Identities=22% Similarity=0.260 Sum_probs=76.2
Q ss_pred cccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEec
Q 002883 248 KNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDL 327 (871)
Q Consensus 248 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 327 (871)
.++..+++++|.+++.. .+..+++|+.|++++|+|+ .++ .+..+++|++|+|++|+|++..+ +..+++|+.|+|
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 33444444444444221 3444455555555555554 222 34445555555555555553322 455555555555
Q ss_pred CCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCccccc
Q 002883 328 SDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGP 407 (871)
Q Consensus 328 ~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 407 (871)
++|++++ +|.. .. ++|+.|++++|++++ ++ .+..+++|+.|+|++|++++. + .+..+++|++|+|++|+|++.
T Consensus 93 ~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 93 NRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 5555542 2211 11 445555555555442 22 344455555555555555422 2 344444455555555544433
Q ss_pred CccccCCCCCCCEEeCCCCcCC
Q 002883 408 IHSGFSSLKGLQDLDLSRNNFS 429 (871)
Q Consensus 408 ~~~~~~~l~~L~~L~l~~N~l~ 429 (871)
..+..+++|+.|++++|+++
T Consensus 166 --~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 166 --GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp --TTSTTCCCCCEEEEEEEEEE
T ss_pred --HHhccCCCCCEEeCCCCccc
Confidence 33444444444444444444
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=2.3e-19 Score=186.16 Aligned_cols=167 Identities=18% Similarity=0.298 Sum_probs=113.6
Q ss_pred ccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccC
Q 002883 226 LIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQG 305 (871)
Q Consensus 226 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (871)
+..+++++|.+++.. .+..+++|+.|++++|.++. ++ .+..+++|++|+|++|+|++..+ +..+++|++|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 555566666665332 45666666666666666663 33 56667777777777777774333 77777777777777
Q ss_pred ccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 306 NSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIP 385 (871)
Q Consensus 306 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 385 (871)
|++++. +. +.. ++|+.|+|++|++++ ++ .+..+++|+.|++++|++++. + .++.+++|+.|+|++|++++.
T Consensus 95 N~l~~l-~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 95 NRLKNL-NG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp SCCSCC-TT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred CccCCc-Cc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 777643 32 222 777777777777774 33 477777888888888887743 3 577788888888888888754
Q ss_pred cchhcccCCceeeecCCccccc
Q 002883 386 TSLASCVGLEYLNFSDNSFQGP 407 (871)
Q Consensus 386 ~~~~~l~~L~~L~L~~N~l~~~ 407 (871)
..+..+++|+.|++++|++...
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEECC
T ss_pred HHhccCCCCCEEeCCCCcccCC
Confidence 5677788888888888888754
No 370
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=2.1e-19 Score=185.87 Aligned_cols=138 Identities=19% Similarity=0.155 Sum_probs=107.7
Q ss_pred CCCCCceeeccccceEEEEEECCCCcE--EEEEEeeccccc------------------------hHHHHHHHHHHHHcC
Q 002883 560 GFSSANLIGIGGYGYVYKGILGTEETN--VAVKVLDLQQRG------------------------ASKSFIAECEALRSI 613 (871)
Q Consensus 560 ~y~~~~~lg~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 613 (871)
-|++.+.||+|+||.||+|.+..+|+. ||||+++..... ....+.+|+++++.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999999667888 999997533111 113678999999999
Q ss_pred CCCcc--ceeeeeecccCcCCCceeeEEEeccCC-C----CHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHh-
Q 002883 614 RHRNL--VKIITSCSSIDTRGNEFKALVYEFMPN-G----SLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLH- 685 (871)
Q Consensus 614 ~h~ni--v~~~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH- 685 (871)
.|+++ +.++++ ...++||||+.+ | +|.++... .++..+..++.|++.|+.|||
T Consensus 128 ~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~----------~~~~~~~~i~~qi~~~l~~lH~ 188 (258)
T 1zth_A 128 KEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE----------LKELDVEGIFNDVVENVKRLYQ 188 (258)
T ss_dssp HHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG----------GGGSCHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc----------cChHHHHHHHHHHHHHHHHHHH
Confidence 88754 334432 235899999942 3 67766532 224457789999999999999
Q ss_pred hcCCCCeEecCCCCCceeeCCCCceEEeecccceec
Q 002883 686 HHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLL 721 (871)
Q Consensus 686 ~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 721 (871)
+. ||+||||||+|||++. .++|+|||+|...
T Consensus 189 ~~---givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 189 EA---ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TS---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HC---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 88 9999999999999988 9999999999764
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.2e-18 Score=172.56 Aligned_cols=153 Identities=16% Similarity=0.220 Sum_probs=95.5
Q ss_pred CCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCE
Q 002883 245 GNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQK 324 (871)
Q Consensus 245 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 324 (871)
+.+++|+.|++++|.++ .++ .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..|+.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 55566666666666666 333 4666666777777766554 2235666667777777777766555666666777777
Q ss_pred EecCCCcCCCCCcccccCCCCCcEEeccCCC-CCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCc
Q 002883 325 LDLSDNNLSGTIPREVIGLSSFVLLDLSRNH-LSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNS 403 (871)
Q Consensus 325 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 403 (871)
|++++|++++..+..+..+++|++|++++|. ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 7777777765556666666667777777666 54 334 46666677777777776663 33 56666666666666666
Q ss_pred cc
Q 002883 404 FQ 405 (871)
Q Consensus 404 l~ 405 (871)
|.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 64
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=3e-21 Score=221.93 Aligned_cols=217 Identities=20% Similarity=0.154 Sum_probs=122.3
Q ss_pred cCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCc
Q 002883 196 VNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQ 275 (871)
Q Consensus 196 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 275 (871)
..+++|+.|+|++|+++ .+|..+..+. +|+.|++++|......| . .+..+.+.+..|..++.+++|+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~-~L~~L~l~~n~~l~~l~----------~-ll~~~~~~~~~~~~l~~l~~L~ 412 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCK-ELQELEPENKWCLLTII----------L-LMRALDPLLYEKETLQYFSTLK 412 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHH-HHHHHCTTCHHHHHHHH----------H-HHHHHCTGGGHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHH-HHHHhccccchhhhhHH----------H-HHHhcccccCCHHHHHHHHhcc
Confidence 44566666777777665 5666666663 46666665543110000 0 0011112234445555555555
Q ss_pred EEE-ccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCC
Q 002883 276 VLS-LFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRN 354 (871)
Q Consensus 276 ~L~-L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N 354 (871)
.|+ ++.|.+ ..|+.+.+++|.|+...+ ..|+.|+|++|+|++ +|. +..+++|+.|+|++|
T Consensus 413 ~L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 413 AVDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp HHCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSS
T ss_pred cCcchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCcc
Confidence 555 444432 234445555555553222 136666666666663 444 666666666666666
Q ss_pred CCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccC-ccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 355 HLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPI-HSGFSSLKGLQDLDLSRNNFSGKIP 433 (871)
Q Consensus 355 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~ 433 (871)
.|+ .+|..++.+++|+.|+|++|+|++ +| .+..+++|+.|+|++|+|++.. |..|..+++|+.|+|++|++++.+|
T Consensus 474 ~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 474 RLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 666 556666666666666666666663 45 5666666666666666666655 6666666777777777777665443
Q ss_pred c---cccccccccEEec
Q 002883 434 M---FLNTFRFLQKLNL 447 (871)
Q Consensus 434 ~---~~~~~~~L~~L~l 447 (871)
. .+..+++|+.|++
T Consensus 551 ~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 551 IQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTHHHHHCTTCSEEEC
T ss_pred HHHHHHHHCcccCccCC
Confidence 2 2333666666653
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=9.7e-19 Score=173.24 Aligned_cols=152 Identities=16% Similarity=0.268 Sum_probs=81.8
Q ss_pred cCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcE
Q 002883 269 GYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVL 348 (871)
Q Consensus 269 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 348 (871)
+.+++|+.|++++|.++ .+| .+..+++|++|++++|.++ . +..+..+++|++|++++|++++..+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 55666777777777776 344 4666666666666666554 2 234556666666666666665444555555555555
Q ss_pred EeccCCCCCCCCccccCCCCCCCEEeCCCCc-CCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCc
Q 002883 349 LDLSRNHLSGPIPLEVGRLKGIQQLDLSENK-LSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNN 427 (871)
Q Consensus 349 L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 427 (871)
|++++|.+++..+..++.+++|++|++++|+ ++ .+| .+..+++|++|++++|++++.. .+..+++|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 5555555554445555555555555555554 43 222 3444444444444444444321 34444444444444444
Q ss_pred C
Q 002883 428 F 428 (871)
Q Consensus 428 l 428 (871)
+
T Consensus 193 i 193 (197)
T 4ezg_A 193 I 193 (197)
T ss_dssp -
T ss_pred c
Confidence 3
No 374
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=2.8e-19 Score=212.28 Aligned_cols=196 Identities=21% Similarity=0.204 Sum_probs=116.9
Q ss_pred CcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEE
Q 002883 199 TFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLS 278 (871)
Q Consensus 199 ~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 278 (871)
+.++.|+|.+|.+.. .+.. .|+.++|+.|.|. .+++..|.+. ..++.|..+++|+.|+
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~------~l~~l~Ls~~~i~--------------~~~~~~n~~~-~~~~~~~~l~~L~~L~ 230 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQA------LLQHKKLSQYSID--------------EDDDIENRMV-MPKDSKYDDQLWHALD 230 (727)
T ss_dssp -----------------------------------------------------------------------CCCCCCEEE
T ss_pred CccceEEeeCCCCCc-chhh------HhhcCccCccccc--------------Ccccccccee-cChhhhccCCCCcEEE
Confidence 446666666666653 2221 2555666666655 2344556666 6677888888899999
Q ss_pred ccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCC
Q 002883 279 LFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSG 358 (871)
Q Consensus 279 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 358 (871)
|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+++++|+.|+|++|+|+ .+|..|..+++|++|+|++|.|+
T Consensus 231 Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~- 306 (727)
T 4b8c_D 231 LSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT- 306 (727)
T ss_dssp CTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-
T ss_pred CCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-
Confidence 9999988 66767778889999999999998 77888899999999999999998 77888999999999999999998
Q ss_pred CCccccCCCCCCCEEeCCCCcCCCCCccchhcccC-CceeeecCCcccccCccccCCCCCCCEEeCCCC
Q 002883 359 PIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVG-LEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRN 426 (871)
Q Consensus 359 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 426 (871)
.+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|. .|+.|++++|
T Consensus 307 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 307 TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTD 369 (727)
T ss_dssp CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C---------
T ss_pred ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecc
Confidence 67878999999999999999999888888766532 34578999999877665 4556677776
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=1.1e-18 Score=188.11 Aligned_cols=132 Identities=11% Similarity=0.048 Sum_probs=70.1
Q ss_pred cccCccCcC--CCCCCEEecCCCcccccCCccccC-CCcCceeeCCCCccc--ccCCccccCCcccceeeccCccccCCC
Q 002883 4 GEIPANITH--CSELRILDLVVNKLEGNIPSELGN-LFKLVGLGLTGNNYT--GSIPQSLSNLSFLQQLSLSENSLSGNI 78 (871)
Q Consensus 4 ~~~p~~~~~--l~~L~~L~l~~n~i~~~~~~~~~~-l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 78 (871)
|+++..+.. +.+++.|.++++ +....-..+.. +++|++|+|++|+|. ...+. .++.+..+.+..|.|.
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~--- 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP--- 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC---
T ss_pred CcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC---
Confidence 444444443 556777777654 22122223333 566777777777766 22222 2222455555555332
Q ss_pred Cccccc--------cccccccccccccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccC
Q 002883 79 PSELGL--------LKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGS 144 (871)
Q Consensus 79 ~~~~~~--------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~ 144 (871)
+..|.+ +++|+.|+|.+ .++...+..|.++++|+.+++++|.+. .++...|....++..+.+..
T Consensus 86 ~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 86 AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGS 157 (329)
T ss_dssp TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTC
T ss_pred HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcc
Confidence 345556 67777777766 565444455666666666666666665 55555555544444444433
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=5.8e-18 Score=166.69 Aligned_cols=178 Identities=26% Similarity=0.344 Sum_probs=118.7
Q ss_pred cEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcc-cccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCC
Q 002883 299 TEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPR-EVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSE 377 (871)
Q Consensus 299 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~ 377 (871)
+.+++++|+++ .+|..+. .+|++|++++|+|++..+. .|..+++|++|+|++|.|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45566666665 3444333 2666666666666644443 366677777777777777766677777777777777777
Q ss_pred CcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCC
Q 002883 378 NKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVP 457 (871)
Q Consensus 378 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 457 (871)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++++..+.. +-...++...+.++...|..|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~-~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA-WFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH-HHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch-HHHHHHHHcCCCCCCCCCCCC
Confidence 7777767777777888888888888888877888888888888888888888655421 111224444566777776666
Q ss_pred CCcccccccceeccCCCCCccCCCc
Q 002883 458 SEGVFKNVRAVSIIGNNKLCGGSPE 482 (871)
Q Consensus 458 ~~~~~~~l~~l~l~~N~~~C~~~~~ 482 (871)
.. +......++..+...|....+
T Consensus 167 ~~--l~~~~l~~l~~~~~~C~~~~~ 189 (192)
T 1w8a_A 167 SK--VRDVQIKDLPHSEFKCSSENS 189 (192)
T ss_dssp TT--TTTSBGGGSCTTTCCCCCC--
T ss_pred hH--HcCCChhhCcHhhcCcCCCCC
Confidence 43 455555667778788876543
No 377
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=6.8e-18 Score=166.07 Aligned_cols=159 Identities=23% Similarity=0.236 Sum_probs=119.3
Q ss_pred CEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCC
Q 002883 323 QKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDN 402 (871)
Q Consensus 323 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 402 (871)
+.+++++|+++ .+|..+. ++|++|++++|.|+ .+|..|..+++|+.|+|++|.|++..+..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46777777776 4555443 57778888888887 66677888888888888888888777778888888888888888
Q ss_pred cccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCCcccccccceeccCCCCCccCCCc
Q 002883 403 SFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGGSPE 482 (871)
Q Consensus 403 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~~~~ 482 (871)
+|+++.+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|.|.+...+....+.......+...|..|+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~~~~~~~~~~~~C~~P~~ 168 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGE 168 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHHSSCCCSCCBEEESGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHHHhccCCCCCcCcCCchH
Confidence 88888888888999999999999999877677788899999999999999987764332222222222334456877766
Q ss_pred ccc
Q 002883 483 LHL 485 (871)
Q Consensus 483 ~~~ 485 (871)
..+
T Consensus 169 l~g 171 (193)
T 2wfh_A 169 MAD 171 (193)
T ss_dssp GTT
T ss_pred HCC
Confidence 543
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1.1e-18 Score=188.06 Aligned_cols=196 Identities=11% Similarity=0.054 Sum_probs=112.9
Q ss_pred ccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccc----cccCcccccCCCCC
Q 002883 247 LKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSI----RGSIPSALGNCLQL 322 (871)
Q Consensus 247 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i----~~~~~~~~~~l~~L 322 (871)
+++|+.|+|.+ .++.+...+|.++++|+.|++++|.+..+.+..|.++.++..+.+..+.. ......+|.++.+|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666666666 55555556666666666666666666555556666665555555544322 11223334444444
Q ss_pred C--------------------------EEecCCCcCCCCCcccc-cCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeC
Q 002883 323 Q--------------------------KLDLSDNNLSGTIPREV-IGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDL 375 (871)
Q Consensus 323 ~--------------------------~L~L~~N~l~~~~~~~~-~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 375 (871)
+ .+.+.++-.. .....+ ..+++|+.|+|++|.++...+..|..+.+|+.|+|
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 4 3333222111 111111 12566777777766666555556666777777777
Q ss_pred CCCcCCCCCccchhcccCCc-eeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEe
Q 002883 376 SENKLSGEIPTSLASCVGLE-YLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLN 446 (871)
Q Consensus 376 ~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~ 446 (871)
.+| ++.+.+.+|.+|.+|+ .+++.+ .++.+.+.+|.++++|+.+++++|+++...+..|..+++|+.++
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 666 5555566667777776 777766 56656666677777777777766767666666666666666665
No 379
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=1.2e-18 Score=206.71 Aligned_cols=192 Identities=22% Similarity=0.231 Sum_probs=87.9
Q ss_pred CCCCEEecCCCcccccCCccccCCCcCcee-----eCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccc
Q 002883 14 SELRILDLVVNKLEGNIPSELGNLFKLVGL-----GLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQL 88 (871)
Q Consensus 14 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L-----~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 88 (871)
+.++.|+|++|.+.. .+..+....+|..+ +++.|++. ..|+.|..+.+|+.|+|++|.+. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 446677777777763 34443222222222 22223333 34455555555555555555555 445444455555
Q ss_pred cccccccccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCC
Q 002883 89 NMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKL 168 (871)
Q Consensus 89 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l 168 (871)
++|+|++|.|+ .+|..|. .+++|+.|+|++|.|+ .+|..|+.+
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~-------------------------~l~~L~~L~Ls~N~l~-----------~lp~~~~~l 292 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIK-------------------------NLSNLRVLDLSHNRLT-----------SLPAELGSC 292 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGG-------------------------GGTTCCEEECTTSCCS-----------SCCSSGGGG
T ss_pred CEEEeeCCcCc-ccChhhh-------------------------CCCCCCEEeCcCCcCC-----------ccChhhcCC
Confidence 55555555555 4444443 5556666666666655 455666677
Q ss_pred CcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCcc
Q 002883 169 KNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLK 248 (871)
Q Consensus 169 ~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~ 248 (871)
++|++|+|++|.|+.++ ..|..+++|++|+|++|.+++.+|..+......+..|+|++|.+++.+|.
T Consensus 293 ~~L~~L~L~~N~l~~lp-------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------ 359 (727)
T 4b8c_D 293 FQLKYFYFFDNMVTTLP-------WEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ 359 (727)
T ss_dssp TTCSEEECCSSCCCCCC-------SSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------
T ss_pred CCCCEEECCCCCCCccC-------hhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------
Confidence 77777777777776543 34667788888888888888777777766543345577888888876664
Q ss_pred ccceeecccc
Q 002883 249 NLILIAMEVN 258 (871)
Q Consensus 249 ~L~~L~l~~N 258 (871)
.|..|+++.|
T Consensus 360 ~l~~l~l~~n 369 (727)
T 4b8c_D 360 ERRFIEINTD 369 (727)
T ss_dssp C---------
T ss_pred ccceeEeecc
Confidence 3445556555
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.3e-16 Score=157.00 Aligned_cols=133 Identities=20% Similarity=0.273 Sum_probs=120.7
Q ss_pred cEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCC
Q 002883 347 VLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRN 426 (871)
Q Consensus 347 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 426 (871)
+.+++++|.++ .+|..+. ++|+.|+|++|.|+ .+|..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57999999999 6776553 68999999999999 78899999999999999999999999999999999999999999
Q ss_pred cCCCCCcccccccccccEEecCCCcCcccCCC-CcccccccceeccCCCCCccCCCcc
Q 002883 427 NFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPS-EGVFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 427 ~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
+|++..|..|..+++|+.|+|++|+++..++. ...+++++.+++.+|+|.|+|...|
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~ 146 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQW 146 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHH
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHH
Confidence 99998888999999999999999999987764 3567889999999999999997654
No 381
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.68 E-value=6.8e-16 Score=169.57 Aligned_cols=241 Identities=10% Similarity=0.059 Sum_probs=152.7
Q ss_pred cccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEc
Q 002883 200 FLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSL 279 (871)
Q Consensus 200 ~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 279 (871)
+|+.+.+..| ++.....+|.. .+|+.+.+.+ .++.+...+|.++++|+.++++.|.++.+...+|. ..+|+.+.|
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~--~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFN--STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTT--CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CccEEEeCCC-ccEECHHhcCC--CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 4666666655 54343444444 2477777764 55556666777777777777777777765556665 467777777
Q ss_pred cCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCC--
Q 002883 280 FGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLS-- 357 (871)
Q Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~-- 357 (871)
..+ ++.+....|.++++|+.+++..| ++.+...+|.+ .+|+.+.+ .+.++.+...+|.++++|+.+++.+|.+.
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~ 286 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDD 286 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCC
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCC
Confidence 643 55556666777777777777664 44455566666 66777777 34455455666777777777777666553
Q ss_pred ---CCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcc
Q 002883 358 ---GPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPM 434 (871)
Q Consensus 358 ---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 434 (871)
...+..|..+++|+.++|.+ .++.+...+|.+|.+|+.+.|..| ++.+...+|.++ +|+.+++++|.+....+.
T Consensus 287 ~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~ 363 (401)
T 4fdw_A 287 PEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEK 363 (401)
T ss_dssp TTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCS
T ss_pred cccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccc
Confidence 24455666777777777763 355555666777777777777444 555666677777 777777777766655555
Q ss_pred cccccc-cccEEecCCCcC
Q 002883 435 FLNTFR-FLQKLNLSFNNL 452 (871)
Q Consensus 435 ~~~~~~-~L~~L~l~~N~l 452 (871)
.|..++ +++.|++..|.+
T Consensus 364 ~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 364 VWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SCCCSCTTCCEEEECGGGH
T ss_pred cccCCCCCccEEEeCHHHH
Confidence 566553 556666655543
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.7e-16 Score=152.61 Aligned_cols=134 Identities=19% Similarity=0.206 Sum_probs=86.2
Q ss_pred CCCCEEecCCCcCC-CCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceee
Q 002883 320 LQLQKLDLSDNNLS-GTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLN 398 (871)
Q Consensus 320 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 398 (871)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45566666666655 44555555566666666666666533 4566666666666666666655666666677777777
Q ss_pred ecCCcccccCc-cccCCCCCCCEEeCCCCcCCCCCc---ccccccccccEEecCCCcCccc
Q 002883 399 FSDNSFQGPIH-SGFSSLKGLQDLDLSRNNFSGKIP---MFLNTFRFLQKLNLSFNNLEGE 455 (871)
Q Consensus 399 L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~~~~L~~L~l~~N~l~~~ 455 (871)
|++|+|++... ..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+...
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 77777765432 566777777777777777775444 3677777777777777776644
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=2.7e-16 Score=151.21 Aligned_cols=132 Identities=23% Similarity=0.235 Sum_probs=74.9
Q ss_pred CCCcEEEccCCCCC-CCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEe
Q 002883 272 LKLQVLSLFGNKIS-GEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLD 350 (871)
Q Consensus 272 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 350 (871)
++|+.|+|++|+++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45666666666665 34555556666666666666666543 4555666666666666666644555555556666666
Q ss_pred ccCCCCCCCC-ccccCCCCCCCEEeCCCCcCCCCCc---cchhcccCCceeeecCCccc
Q 002883 351 LSRNHLSGPI-PLEVGRLKGIQQLDLSENKLSGEIP---TSLASCVGLEYLNFSDNSFQ 405 (871)
Q Consensus 351 ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~ 405 (871)
+++|.+++.. +..+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666665321 1455556666666666666653333 24555555555555555554
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=5.8e-16 Score=150.32 Aligned_cols=133 Identities=22% Similarity=0.279 Sum_probs=95.0
Q ss_pred CCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecC
Q 002883 322 LQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSD 401 (871)
Q Consensus 322 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 401 (871)
.+.+++++|+++ .+|..+. ++|+.|++++|.+++..+..+..+++|++|++++|.+++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 355666666666 3443332 5667777777777655555567777777777777777765556677777788888888
Q ss_pred CcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCC
Q 002883 402 NSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVP 457 (871)
Q Consensus 402 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 457 (871)
|+|++..+..|..+++|++|++++|++++..+..+..+++|++|++++|+++|.+|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88877777777778888888888888886666667778888888888888887665
No 385
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.64 E-value=3.5e-15 Score=164.81 Aligned_cols=334 Identities=11% Similarity=0.044 Sum_probs=178.4
Q ss_pred ccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccccccccCCCCcc
Q 002883 26 LEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLTGSIPIQ 105 (871)
Q Consensus 26 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 105 (871)
++.....+|.++.+|+.+.|..+ ++.+...+|.++++|+.++|.++ ++.....+|.++++|+.+.+..+ +.......
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 44455667777777777777643 66555666777777777777655 44355566777777777766554 33233444
Q ss_pred ccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCc-cccCCCcccEEecccccCCCC
Q 002883 106 LFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPE-DLGKLKNLIRLNFARNNLGTG 184 (871)
Q Consensus 106 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~-~~~~l~~L~~L~l~~n~l~~~ 184 (871)
|.+...++........ .+....|....+|+.+.+.++.. .+++ .|.++.+|+.+.+..| ++.+
T Consensus 136 F~~~~~~~~~~~~~~~---~i~~~aF~~c~~L~~i~l~~~~~------------~I~~~~F~~c~~L~~i~l~~~-~~~I 199 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVT---VIGDEAFATCESLEYVSLPDSME------------TLHNGLFSGCGKLKSIKLPRN-LKII 199 (394)
T ss_dssp TTTCCCSEEECCTTCC---EECTTTTTTCTTCCEEECCTTCC------------EECTTTTTTCTTCCBCCCCTT-CCEE
T ss_pred eecccccccccCcccc---ccchhhhcccCCCcEEecCCccc------------eeccccccCCCCceEEEcCCC-ceEe
Confidence 5544433322221111 34444555556666666544321 1222 2555555555555443 3332
Q ss_pred CCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccC
Q 002883 185 KGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSI 264 (871)
Q Consensus 185 ~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 264 (871)
.. ..+.++..|+.+.+..+... +...+....+|+.+.+..+ ++.+.
T Consensus 200 ~~------~~F~~~~~L~~i~~~~~~~~---------------------------i~~~~~~~~~l~~i~ip~~-~~~i~ 245 (394)
T 4fs7_A 200 RD------YCFAECILLENMEFPNSLYY---------------------------LGDFALSKTGVKNIIIPDS-FTELG 245 (394)
T ss_dssp CT------TTTTTCTTCCBCCCCTTCCE---------------------------ECTTTTTTCCCCEEEECTT-CCEEC
T ss_pred Cc------hhhccccccceeecCCCceE---------------------------eehhhcccCCCceEEECCC-ceecc
Confidence 22 22334444544444443322 1122222334444444322 22233
Q ss_pred CccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCC
Q 002883 265 PTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLS 344 (871)
Q Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 344 (871)
..+|..+..|+.+.+..+... .....|..+..++.+....+.+. ...|..+.+|+.+.+..+ ++.+...+|.+++
T Consensus 246 ~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~ 320 (394)
T 4fs7_A 246 KSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCT 320 (394)
T ss_dssp SSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCT
T ss_pred cccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCC
Confidence 445555555666666555443 44555556666666655554332 235556666666666544 4434455666666
Q ss_pred CCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEE
Q 002883 345 SFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDL 421 (871)
Q Consensus 345 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 421 (871)
+|+.+++.++ ++.....+|.++.+|+.+++..| ++.+...+|.+|.+|+.+++..+ ++ ....+|.+.++|+.+
T Consensus 321 ~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 321 SLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 6666666543 44344556677777777777665 55455667777777777777654 33 224556666666653
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=3.9e-16 Score=146.83 Aligned_cols=127 Identities=20% Similarity=0.274 Sum_probs=75.5
Q ss_pred CCCCEEecCCCcCC-CCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceee
Q 002883 320 LQLQKLDLSDNNLS-GTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLN 398 (871)
Q Consensus 320 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 398 (871)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..++.+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555554 44455555555555555555555533 4555666666666666666654565555666666666
Q ss_pred ecCCccccc-CccccCCCCCCCEEeCCCCcCCCCCc---ccccccccccEEecC
Q 002883 399 FSDNSFQGP-IHSGFSSLKGLQDLDLSRNNFSGKIP---MFLNTFRFLQKLNLS 448 (871)
Q Consensus 399 L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~~~~L~~L~l~ 448 (871)
+++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666653 23556666666666666666665444 356666667766665
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=6.6e-15 Score=161.66 Aligned_cols=244 Identities=13% Similarity=0.082 Sum_probs=202.8
Q ss_pred CcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEE
Q 002883 199 TFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLS 278 (871)
Q Consensus 199 ~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 278 (871)
..++.+.+.++ ++......|.. .+|+.+.+.+| ++.+...+|.+ .+|+.+.+.. .++.+...+|.++++|+.++
T Consensus 113 ~~l~~i~ip~~-i~~I~~~aF~~--~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPNS-VKSIPKDAFRN--SQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCTT-CCEECTTTTTT--CCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred CCccEEEECCc-cCEehHhhccc--CCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 55677777653 55344455554 36999999887 77788888988 4799999996 77778889999999999999
Q ss_pred ccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCC
Q 002883 279 LFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSG 358 (871)
Q Consensus 279 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 358 (871)
|++|+++.+....|. ..+|+.+.|..+ ++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+. |.++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccE
Confidence 999999966666776 689999999855 77688889999999999999986 56566777877 899999994 55665
Q ss_pred CCccccCCCCCCCEEeCCCCcCC-----CCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 359 PIPLEVGRLKGIQQLDLSENKLS-----GEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIP 433 (871)
Q Consensus 359 ~~~~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 433 (871)
....+|..+++|+.+++.+|.+. ...+..|.+|++|+.++|. |.++.+...+|.++.+|+.++|.+| ++...+
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~ 339 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINF 339 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECT
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcH
Confidence 67889999999999999998875 4677899999999999999 5588888999999999999999655 777778
Q ss_pred ccccccccccEEecCCCcCcccC
Q 002883 434 MFLNTFRFLQKLNLSFNNLEGEV 456 (871)
Q Consensus 434 ~~~~~~~~L~~L~l~~N~l~~~~ 456 (871)
..|..+ +|+.+++++|.+....
T Consensus 340 ~aF~~~-~L~~l~l~~n~~~~l~ 361 (401)
T 4fdw_A 340 SAFNNT-GIKEVKVEGTTPPQVF 361 (401)
T ss_dssp TSSSSS-CCCEEEECCSSCCBCC
T ss_pred HhCCCC-CCCEEEEcCCCCcccc
Confidence 899999 9999999999876543
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=4.4e-16 Score=146.44 Aligned_cols=127 Identities=20% Similarity=0.209 Sum_probs=67.3
Q ss_pred CCCcEEEccCCCCC-CCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEe
Q 002883 272 LKLQVLSLFGNKIS-GEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLD 350 (871)
Q Consensus 272 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 350 (871)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666665 44555555566666666666666533 4455555566666666655544555554555555555
Q ss_pred ccCCCCCCC-CccccCCCCCCCEEeCCCCcCCCCCc---cchhcccCCceeeec
Q 002883 351 LSRNHLSGP-IPLEVGRLKGIQQLDLSENKLSGEIP---TSLASCVGLEYLNFS 400 (871)
Q Consensus 351 ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~ 400 (871)
+++|.+++. .+..++.+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555555531 12445555555555555555553332 244444555554443
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.62 E-value=7.6e-15 Score=162.10 Aligned_cols=335 Identities=11% Similarity=0.030 Sum_probs=204.5
Q ss_pred ccccCCccccCCcccceeeccCccccCCCCccccccccccccccccccccCCCCccccccCCCceeeeeccccccccccc
Q 002883 50 YTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHY 129 (871)
Q Consensus 50 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 129 (871)
++.+...+|.++.+|+.+.|..+ ++.+...+|.++++|+.+++.++ ++......|.++.+|+.+.+..+ +. .+...
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~-~i~~~ 134 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LK-SIGVE 134 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-ee-eecce
Confidence 44444456667777777777643 55444556666677776666544 33233445555555555544332 11 22222
Q ss_pred cccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCC
Q 002883 130 VGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSN 209 (871)
Q Consensus 130 ~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n 209 (871)
.| .+...+....... +..+. -..+.++++|+.+.+.++
T Consensus 135 aF----------------------------------~~~~~~~~~~~~~--~~~i~------~~aF~~c~~L~~i~l~~~ 172 (394)
T 4fs7_A 135 AF----------------------------------KGCDFKEITIPEG--VTVIG------DEAFATCESLEYVSLPDS 172 (394)
T ss_dssp TT----------------------------------TTCCCSEEECCTT--CCEEC------TTTTTTCTTCCEEECCTT
T ss_pred ee----------------------------------ecccccccccCcc--ccccc------hhhhcccCCCcEEecCCc
Confidence 22 2222111111111 11111 134556677777777655
Q ss_pred cCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCC
Q 002883 210 SLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIP 289 (871)
Q Consensus 210 ~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 289 (871)
..+ .....+... .+|+.+.+..| ++.+....|.++..|+.+.+..+... +.+.+....+|+.+.+..+- +....
T Consensus 173 ~~~-I~~~~F~~c-~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~ 246 (394)
T 4fs7_A 173 MET-LHNGLFSGC-GKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGK 246 (394)
T ss_dssp CCE-ECTTTTTTC-TTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECS
T ss_pred cce-eccccccCC-CCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCc-eeccc
Confidence 332 323333333 45777777665 44466677888888888887776544 23334445678888876543 33556
Q ss_pred cccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCC
Q 002883 290 SSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKG 369 (871)
Q Consensus 290 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 369 (871)
..|..+..|+.+.+..+... +....|..+..++.+....+.+. ...|.+..+|+.+.+.++ ++.....+|..+.+
T Consensus 247 ~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~ 321 (394)
T 4fs7_A 247 SVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTS 321 (394)
T ss_dssp STTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTT
T ss_pred ccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCC
Confidence 67788888888888777655 66777888888888877766543 346777788888888765 55455667888888
Q ss_pred CCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEE
Q 002883 370 IQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKL 445 (871)
Q Consensus 370 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L 445 (871)
|+.+++.++ ++.+...+|.+|.+|+.+.+..| ++.+...+|.++.+|+.+++..+ ++ .+...|.++++|+.+
T Consensus 322 L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 322 LVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 888888654 65566777888888888888766 66677778888888888887644 43 345567777777654
No 390
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=5e-16 Score=165.92 Aligned_cols=137 Identities=15% Similarity=0.191 Sum_probs=99.3
Q ss_pred CCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc--------------chHHH--------HHHHHHHHHcCCCCc
Q 002883 560 GFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR--------------GASKS--------FIAECEALRSIRHRN 617 (871)
Q Consensus 560 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l~~l~h~n 617 (871)
=|++.+.||+|+||.||+|.+. +|+.||||+++.... ..... ..+|...+.++.+..
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3999999999999999999986 799999999753210 00111 234566666664333
Q ss_pred cc--eeeeeecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEec
Q 002883 618 LV--KIITSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHC 695 (871)
Q Consensus 618 iv--~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 695 (871)
+. ..++. ...++||||++|++|.++... .....++.|++.++.|||+. |||||
T Consensus 175 v~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~-------------~~~~~l~~qll~~l~~lH~~---gIVHr 229 (397)
T 4gyi_A 175 FPVPEPIAQ---------SRHTIVMSLVDALPMRQVSSV-------------PDPASLYADLIALILRLAKH---GLIHG 229 (397)
T ss_dssp CSCCCEEEE---------ETTEEEEECCSCEEGGGCCCC-------------SCHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred CCCCeeeec---------cCceEEEEecCCccHhhhccc-------------HHHHHHHHHHHHHHHHHHHC---CCcCC
Confidence 22 22221 223799999999887654321 13456889999999999998 99999
Q ss_pred CCCCCceeeCCCC----------ceEEeecccceecC
Q 002883 696 DLKPSNVLLDNEM----------VAHVGDFGLSRLLH 722 (871)
Q Consensus 696 Dlkp~Nill~~~~----------~~kl~Dfg~a~~~~ 722 (871)
||||.|||++.++ .+.|+||+-+....
T Consensus 230 DLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 230 DFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 9999999998776 38999999887543
No 391
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=2.9e-15 Score=145.36 Aligned_cols=133 Identities=23% Similarity=0.262 Sum_probs=96.1
Q ss_pred ccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCC
Q 002883 298 LTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSE 377 (871)
Q Consensus 298 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~ 377 (871)
.+.+++++|+++ .+|..+. ++|+.|++++|++++..+..|..+++|++|++++|.+++..+..+..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 355666666666 3333332 5677777777777655555666777777777777777755555677788888888888
Q ss_pred CcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCc
Q 002883 378 NKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIP 433 (871)
Q Consensus 378 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 433 (871)
|.+++..+..|..+++|++|+|++|+|++..+..|..+++|++|++++|++++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88886666667788888888888888887777777888889999999998886544
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.58 E-value=3.1e-15 Score=144.94 Aligned_cols=132 Identities=20% Similarity=0.221 Sum_probs=84.5
Q ss_pred ccCCCCCcEEEccCCCCCCCCCcccCCCc-cccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCC
Q 002883 268 VGYLLKLQVLSLFGNKISGEIPSSLGNLI-FLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSF 346 (871)
Q Consensus 268 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 346 (871)
+..+.+|+.|++++|+++. ++. +..+. +|+.|+|++|+|++. ..|..+++|++|++++|+|++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4455666666666666663 333 33333 677777777776643 456667777777777777765444445667777
Q ss_pred cEEeccCCCCCCCCcc--ccCCCCCCCEEeCCCCcCCCCCccc----hhcccCCceeeecCCccc
Q 002883 347 VLLDLSRNHLSGPIPL--EVGRLKGIQQLDLSENKLSGEIPTS----LASCVGLEYLNFSDNSFQ 405 (871)
Q Consensus 347 ~~L~ls~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~L~~N~l~ 405 (871)
++|++++|.++ .+|. .+..+++|+.|++++|+++ ..|.. +..+++|+.|++++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777775 3444 5667777777777777776 44443 666777777777777665
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=3.4e-15 Score=144.66 Aligned_cols=135 Identities=19% Similarity=0.176 Sum_probs=91.5
Q ss_pred ccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCc
Q 002883 316 LGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLE 395 (871)
Q Consensus 316 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 395 (871)
+.++.+|+.|++++|+++ .++......++|++|++++|.+++. ..++.+++|++|+|++|+|++..+..|..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 455666667777777666 3343222223677777777777643 4677777777777777777755445557777888
Q ss_pred eeeecCCcccccCc-cccCCCCCCCEEeCCCCcCCCCCcc----cccccccccEEecCCCcCcc
Q 002883 396 YLNFSDNSFQGPIH-SGFSSLKGLQDLDLSRNNFSGKIPM----FLNTFRFLQKLNLSFNNLEG 454 (871)
Q Consensus 396 ~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~----~~~~~~~L~~L~l~~N~l~~ 454 (871)
+|+|++|+|+...+ ..+..+++|+.|++++|+++ ..|. .+..+++|+.||+++|....
T Consensus 92 ~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 92 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 88888888764332 26777888888888888887 4455 37788888888888887654
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=3.1e-17 Score=162.52 Aligned_cols=133 Identities=23% Similarity=0.285 Sum_probs=81.5
Q ss_pred cccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCC
Q 002883 315 ALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGL 394 (871)
Q Consensus 315 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 394 (871)
.|..+++|++|++++|++++ +| .+..+++|+.|++++|.++ .+|..+..+++|+.|++++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 55556666666666666653 44 5555666666666666665 445555556666666666666663 33 46666677
Q ss_pred ceeeecCCcccccCc-cccCCCCCCCEEeCCCCcCCCCCcc----------cccccccccEEecCCCcCcc
Q 002883 395 EYLNFSDNSFQGPIH-SGFSSLKGLQDLDLSRNNFSGKIPM----------FLNTFRFLQKLNLSFNNLEG 454 (871)
Q Consensus 395 ~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~----------~~~~~~~L~~L~l~~N~l~~ 454 (871)
++|++++|+|++..+ ..+..+++|++|++++|++++..|. .+..+++|+.|| +|+++.
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 777777777664333 4566677777777777776654443 266677777765 666553
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=2.4e-14 Score=137.52 Aligned_cols=110 Identities=19% Similarity=0.212 Sum_probs=82.1
Q ss_pred CcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCC
Q 002883 346 FVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSR 425 (871)
Q Consensus 346 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 425 (871)
.+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 355666666666 4554442 6677777777777766677777778888888888888877777778888888888888
Q ss_pred CcCCCCCcccccccccccEEecCCCcCcccCCC
Q 002883 426 NNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPS 458 (871)
Q Consensus 426 N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~ 458 (871)
|+|++..+..|..+++|+.|+|++|+|+|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 888876666788888888888888888887753
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=9.4e-17 Score=159.00 Aligned_cols=64 Identities=27% Similarity=0.245 Sum_probs=25.1
Q ss_pred cccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCC
Q 002883 267 SVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLS 333 (871)
Q Consensus 267 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 333 (871)
.+..+++|++|+|++|++++ +| .+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~ 106 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA 106 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECC
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCC
Confidence 33344444444444444432 22 3333444444444444443 23333333334444444444443
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=5.6e-14 Score=135.36 Aligned_cols=108 Identities=22% Similarity=0.294 Sum_probs=74.1
Q ss_pred cEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCC
Q 002883 347 VLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRN 426 (871)
Q Consensus 347 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 426 (871)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45566666665 4454443 56677777777776666666777777777777777777666666677777777777777
Q ss_pred cCCCCCcccccccccccEEecCCCcCcccCC
Q 002883 427 NFSGKIPMFLNTFRFLQKLNLSFNNLEGEVP 457 (871)
Q Consensus 427 ~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 457 (871)
+|++..+..+..+++|+.|+|++|+|.+.++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 7776555567777777777777777777654
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=3e-13 Score=129.80 Aligned_cols=108 Identities=23% Similarity=0.306 Sum_probs=85.6
Q ss_pred CCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecC
Q 002883 322 LQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSD 401 (871)
Q Consensus 322 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 401 (871)
.+.+++++|+++ .+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 467777777777 4555443 6778888888888876677788888888888888888876677778888888888888
Q ss_pred CcccccCccccCCCCCCCEEeCCCCcCCCCC
Q 002883 402 NSFQGPIHSGFSSLKGLQDLDLSRNNFSGKI 432 (871)
Q Consensus 402 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 432 (871)
|+|+++.+..|..+++|++|+|++|+++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 8888877778888899999999999888543
No 399
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.44 E-value=3.1e-12 Score=141.06 Aligned_cols=133 Identities=15% Similarity=0.302 Sum_probs=65.6
Q ss_pred CcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCC
Q 002883 289 PSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLK 368 (871)
Q Consensus 289 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 368 (871)
...|.++.+|+.+.+.++... +...+|.++++|+.+.+. +.++.+....|.++.+|+.+++..+ ++.....+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 344555555555555444332 444455555555555554 2333344445555555666555543 3334445566666
Q ss_pred CCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcC
Q 002883 369 GIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNF 428 (871)
Q Consensus 369 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 428 (871)
+|+.+.+..+ ++.+...+|.+|.+|+.+++.+|.... ..|....+|+.+.+..|.+
T Consensus 335 ~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 335 QLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 6666666543 444555666666666666666665431 3455556666666655543
No 400
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=3.9e-13 Score=129.43 Aligned_cols=106 Identities=22% Similarity=0.285 Sum_probs=82.6
Q ss_pred CEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCC
Q 002883 323 QKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDN 402 (871)
Q Consensus 323 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 402 (871)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777777776 5555443 67777888888887666777888888888888888888665666788888888888888
Q ss_pred cccccCccccCCCCCCCEEeCCCCcCCCC
Q 002883 403 SFQGPIHSGFSSLKGLQDLDLSRNNFSGK 431 (871)
Q Consensus 403 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 431 (871)
+|+++.+..|..+++|++|+|++|++...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 88877777788888999999999988843
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.38 E-value=2.5e-11 Score=133.87 Aligned_cols=336 Identities=11% Similarity=0.127 Sum_probs=188.0
Q ss_pred ccccCCccccCCC-cCceeeCCCCcccccCCccccCCcccceeeccCcc---ccCCCCccccccccccccccccccccCC
Q 002883 26 LEGNIPSELGNLF-KLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENS---LSGNIPSELGLLKQLNMFQVSANYLTGS 101 (871)
Q Consensus 26 i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~---l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 101 (871)
++.....+|.+.+ .|+...|..+ ++.+...+|.++.+|+.+.+++|. ++.....+|..+.+|+.+.+..+ ++..
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 3434456666653 4666666544 554555667777777777776653 44344556667777776666554 3324
Q ss_pred CCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCcc-ccCCCcccEEeccccc
Q 002883 102 IPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPED-LGKLKNLIRLNFARNN 180 (871)
Q Consensus 102 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~-~~~l~~L~~L~l~~n~ 180 (871)
....|.++.+|+.+.+..+.- .++...+....+|+.+.+..+ ++ .+.+. |. ..+|+.+.+..+-
T Consensus 129 ~~~aF~~c~~L~~i~lp~~~~--~I~~~~F~~c~~L~~i~~~~~-~~-----------~I~~~aF~-~~~l~~i~ip~~~ 193 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEGVT--SVADGMFSYCYSLHTVTLPDS-VT-----------AIEERAFT-GTALTQIHIPAKV 193 (394)
T ss_dssp CTTTTTTCTTCCEEECCTTCC--EECTTTTTTCTTCCEEECCTT-CC-----------EECTTTTT-TCCCSEEEECTTC
T ss_pred hhhhhhhhcccccccccceee--eecccceecccccccccccce-ee-----------Eecccccc-ccceeEEEECCcc
Confidence 445566677777777654322 566666666777777776554 22 22222 32 2456666665442
Q ss_pred CCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccc
Q 002883 181 LGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLL 260 (871)
Q Consensus 181 l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l 260 (871)
. .+. ...+..+.+++......+... .....+.........-. ..+.....+..+.+. +.+
T Consensus 194 ~-~i~------~~af~~c~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ip-~~v 253 (394)
T 4gt6_A 194 T-RIG------TNAFSECFALSTITSDSESYP-AIDNVLYEKSANGDYAL-----------IRYPSQREDPAFKIP-NGV 253 (394)
T ss_dssp C-EEC------TTTTTTCTTCCEEEECCSSSC-BSSSCEEEECTTSCEEE-----------EECCTTCCCSEEECC-TTE
T ss_pred c-ccc------cchhhhccccceecccccccc-cccceeecccccccccc-----------cccccccccceEEcC-Ccc
Confidence 2 211 234556677777776665554 22222211110000000 011112233333333 233
Q ss_pred cccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccc
Q 002883 261 TGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREV 340 (871)
Q Consensus 261 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 340 (871)
+.+...+|.++.+|+.+.+.++... +....|.++.+|+.+.+. +.++.+...+|.++.+|+.+.+..+ ++.+...+|
T Consensus 254 ~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF 330 (394)
T 4gt6_A 254 ARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAF 330 (394)
T ss_dssp EEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred eEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHh
Confidence 3355566777777777777665544 566677777777777775 4455466667777888888888654 554566677
Q ss_pred cCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCccc
Q 002883 341 IGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQ 405 (871)
Q Consensus 341 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 405 (871)
.++.+|+.+.+..+ ++.....+|.++.+|+.+++.+|... -..+..+.+|+.+.+..|.+.
T Consensus 331 ~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 331 AGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC-----------
T ss_pred hCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCEE
Confidence 78888888888654 55455677888888888888877654 245666778888877766553
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.36 E-value=9.3e-15 Score=158.93 Aligned_cols=66 Identities=17% Similarity=0.036 Sum_probs=27.4
Q ss_pred hhcccCCceeeecCCcccccC----ccccCCCCCCCEEeCCCCcCCCCCcccccccc-----cccEEe--cCCCcCc
Q 002883 388 LASCVGLEYLNFSDNSFQGPI----HSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFR-----FLQKLN--LSFNNLE 453 (871)
Q Consensus 388 ~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-----~L~~L~--l~~N~l~ 453 (871)
+...++|++|+|++|.|++.. ...+...++|++|||++|.|+......+..+. .|+.+. +.+|.++
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 333444555555555544321 22233345566666666665533333332221 155555 5566554
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.36 E-value=9.7e-15 Score=158.78 Aligned_cols=89 Identities=22% Similarity=0.268 Sum_probs=59.9
Q ss_pred CCCCCEEeCCCCcCCCC----CccchhcccCCceeeecCCcccccC----ccccCCCCCCCEEeCCCCcCCCC----Ccc
Q 002883 367 LKGIQQLDLSENKLSGE----IPTSLASCVGLEYLNFSDNSFQGPI----HSGFSSLKGLQDLDLSRNNFSGK----IPM 434 (871)
Q Consensus 367 l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~----~~~ 434 (871)
.++|++|+|++|.|++. ++..+..+++|++|+|++|.|++.. ...+...++|++|+|++|.|+.. ++.
T Consensus 154 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~ 233 (372)
T 3un9_A 154 QCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALAR 233 (372)
T ss_dssp TCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHH
T ss_pred CCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHH
Confidence 45566666666666532 2333455677777777777776432 44566777899999999988753 334
Q ss_pred cccccccccEEecCCCcCccc
Q 002883 435 FLNTFRFLQKLNLSFNNLEGE 455 (871)
Q Consensus 435 ~~~~~~~L~~L~l~~N~l~~~ 455 (871)
.+...++|++|+|++|+|+..
T Consensus 234 ~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 234 AAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHCSSCCEEECTTSSCCHH
T ss_pred HHHhCCCCCEEeccCCCCCHH
Confidence 455668899999999988754
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=9.7e-13 Score=142.66 Aligned_cols=103 Identities=21% Similarity=0.248 Sum_probs=53.7
Q ss_pred EEecCCC-cCCCCCcccccCCCCCcEEeccC-CCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecC
Q 002883 324 KLDLSDN-NLSGTIPREVIGLSSFVLLDLSR-NHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSD 401 (871)
Q Consensus 324 ~L~L~~N-~l~~~~~~~~~~l~~L~~L~ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 401 (871)
.++++++ +|+ .+|. +..+++|+.|+|++ |.|++..+..|..+++|+.|+|++|+|++..|..|..+++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3455555 555 3444 55555555555553 555544444555555555555555555555555555555555555555
Q ss_pred CcccccCccccCCCCCCCEEeCCCCcCC
Q 002883 402 NSFQGPIHSGFSSLKGLQDLDLSRNNFS 429 (871)
Q Consensus 402 N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 429 (871)
|+|+++++..|..++ |+.|+|++|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 555544444444443 555555555554
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=2.8e-12 Score=139.06 Aligned_cols=131 Identities=18% Similarity=0.140 Sum_probs=80.8
Q ss_pred EEeccCC-CCCCCCccccCCCCCCCEEeCCC-CcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCC
Q 002883 348 LLDLSRN-HLSGPIPLEVGRLKGIQQLDLSE-NKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSR 425 (871)
Q Consensus 348 ~L~ls~N-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 425 (871)
.++++++ .|+ .+|. +..+++|+.|+|++ |.|++..+..|..+++|+.|+|++|+|+++.+..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3566666 666 4555 66677777777774 777766566677777777777777777766666677777777777777
Q ss_pred CcCCCCCcccccccccccEEecCCCcCcccCCCCcc--cccccceeccCCCCCccCCC
Q 002883 426 NNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGV--FKNVRAVSIIGNNKLCGGSP 481 (871)
Q Consensus 426 N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~--~~~l~~l~l~~N~~~C~~~~ 481 (871)
|+|++..+..+..++ |+.|+|.+|+|.|.+...+. +.......+..+...|..+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 777765555555554 77777777777766542211 11112223344556666554
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=1.3e-11 Score=127.98 Aligned_cols=147 Identities=16% Similarity=0.092 Sum_probs=112.6
Q ss_pred HHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccCcCCC
Q 002883 555 LKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGN 633 (871)
Q Consensus 555 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 633 (871)
.....+|++....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~----- 82 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD----- 82 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET-----
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC-----
Confidence 344567888888999999999999864 6789999986532223346888999999884 67788888876543
Q ss_pred ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC-------------------------
Q 002883 634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC------------------------- 688 (871)
Q Consensus 634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------- 688 (871)
+..|+||||++|.++.+.... ......++.+++++++.||+..
T Consensus 83 ~~~~lv~e~i~G~~l~~~~~~------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (263)
T 3tm0_A 83 GWSNLLMSEADGVLCSEEYED------------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL 150 (263)
T ss_dssp TEEEEEEECCSSEEHHHHCCT------------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred CceEEEEEecCCeehhhccCC------------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccc
Confidence 567999999999999876321 1123467889999999999821
Q ss_pred -------------------------------CCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883 689 -------------------------------HTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL 720 (871)
Q Consensus 689 -------------------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 720 (871)
...++|||++|.||+++.+..+.|+||+.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13699999999999998766677999998753
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.18 E-value=1.1e-09 Score=120.15 Aligned_cols=316 Identities=12% Similarity=0.100 Sum_probs=162.2
Q ss_pred cccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccccccccCCCCccccccCCC
Q 002883 33 ELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSM 112 (871)
Q Consensus 33 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 112 (871)
++..-.+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++.+...+|.+. +|+.+.+..+ ++ .+....+...+|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQGTDL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTTTCCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-EeccceeccCCc
Confidence 344555666666653 345444556666666666666544 443445556555 4555555433 33 233322233466
Q ss_pred ceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCC-ccccCCCcccEEecccccCCCCCCCCccc
Q 002883 113 DYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIP-EDLGKLKNLIRLNFARNNLGTGKGNDLRF 191 (871)
Q Consensus 113 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 191 (871)
+.+.+..+.. .+....+. -.+|+.+.+..+ ++ .+. ..+....+++...+..+..........
T Consensus 116 ~~i~lp~~~~--~i~~~~F~-~~~l~~~~~~~~-v~-----------~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-- 178 (379)
T 4h09_A 116 DDFEFPGATT--EIGNYIFY-NSSVKRIVIPKS-VT-----------TIKDGIGYKAENLEKIEVSSNNKNYVAENYV-- 178 (379)
T ss_dssp SEEECCTTCC--EECTTTTT-TCCCCEEEECTT-CC-----------EECSCTTTTCTTCCEEEECTTCSSEEEETTE--
T ss_pred ccccCCCccc--cccccccc-cceeeeeeccce-ee-----------ccccchhcccccccccccccccceeecccce--
Confidence 6666655422 34444442 234444444332 11 111 224555566666555443221110000
Q ss_pred cccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCC
Q 002883 192 LDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYL 271 (871)
Q Consensus 192 ~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 271 (871)
....+. .....+... ..+..+.+..+.-. .....+...++|+.+.+..+ ++.+...+|..+
T Consensus 179 -------------~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~ 239 (379)
T 4h09_A 179 -------------LYNKNK---TILESYPAA-KTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGM 239 (379)
T ss_dssp -------------EEETTS---SEEEECCTT-CCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTC
T ss_pred -------------eccccc---ceecccccc-ccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCC
Confidence 000000 000011111 12333333332222 34455556666666666544 333455566666
Q ss_pred CCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEec
Q 002883 272 LKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDL 351 (871)
Q Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 351 (871)
.+|+.+.+..+ ++.+....|.++.+|+.+.+..+ ++.+...+|.++++|+.+.+.++.++.+....|.++.+|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 67777776654 44455566666777777776544 44355566777777777777777666555666777777777777
Q ss_pred cCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccC
Q 002883 352 SRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVG 393 (871)
Q Consensus 352 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 393 (871)
..+ ++.....+|.++.+|+.+.+..+ ++.+...+|.++..
T Consensus 318 p~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~ 357 (379)
T 4h09_A 318 PTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSI 357 (379)
T ss_dssp CTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSC
T ss_pred Ccc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCC
Confidence 654 44345566777777777777654 55455666766643
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.13 E-value=1.9e-09 Score=118.07 Aligned_cols=317 Identities=12% Similarity=0.103 Sum_probs=221.6
Q ss_pred cccCCcccceeeccCccccCCCCccccccccccccccccccccCCCCccccccCCCceeeeeccccccccccccccCCCC
Q 002883 57 SLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPN 136 (871)
Q Consensus 57 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 136 (871)
.+....+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++......|.+. +|+.+.+..+ +. .++...|. ..+
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~-~~~ 114 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQ-GTD 114 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTT-TCC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-Eeccceec-cCC
Confidence 4566788999999864 66567788999999999999765 664555667665 6888877654 33 67777774 458
Q ss_pred ccEEEccCccCCCCCCccCcCCCCCCcc-ccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccC
Q 002883 137 IRVLLLGSNWFTGEIPPSISNASSIPED-LGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVL 215 (871)
Q Consensus 137 L~~L~l~~n~i~~~~p~~~~~~~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 215 (871)
|+.+.+..+- + .+.+. |.. .+|+.+.+-.+ ++.+.. ..+..+.+++.+.+..+......
T Consensus 115 L~~i~lp~~~-~-----------~i~~~~F~~-~~l~~~~~~~~-v~~i~~------~~f~~~~~l~~~~~~~~~~~~~~ 174 (379)
T 4h09_A 115 LDDFEFPGAT-T-----------EIGNYIFYN-SSVKRIVIPKS-VTTIKD------GIGYKAENLEKIEVSSNNKNYVA 174 (379)
T ss_dssp CSEEECCTTC-C-----------EECTTTTTT-CCCCEEEECTT-CCEECS------CTTTTCTTCCEEEECTTCSSEEE
T ss_pred cccccCCCcc-c-----------ccccccccc-ceeeeeeccce-eecccc------chhcccccccccccccccceeec
Confidence 9999887652 2 22222 332 35666555433 333322 34567788888887776554211
Q ss_pred ChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCC
Q 002883 216 PNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNL 295 (871)
Q Consensus 216 ~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 295 (871)
...... ..+. .....+....++..+.+..+.-. .....+....+|+.+.+..+ +.......|.++
T Consensus 175 -~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~ 239 (379)
T 4h09_A 175 -ENYVLY---------NKNK---TILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGM 239 (379)
T ss_dssp -ETTEEE---------ETTS---SEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTC
T ss_pred -ccceec---------cccc---ceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCC
Confidence 111100 1111 12233445556666666554433 55677888889999999766 444667788999
Q ss_pred ccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeC
Q 002883 296 IFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDL 375 (871)
Q Consensus 296 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 375 (871)
..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++......|.++++|+.+.+.++.++.....+|.++.+|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 99999999876 66577788999999999999765 55466778999999999999999888667788999999999999
Q ss_pred CCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCC
Q 002883 376 SENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGL 418 (871)
Q Consensus 376 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 418 (871)
..+ ++.+...+|.+|.+|+.+.+..+ ++.+...+|.+...+
T Consensus 318 p~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~~ 358 (379)
T 4h09_A 318 PTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSIT 358 (379)
T ss_dssp CTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSCC
T ss_pred Ccc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCCC
Confidence 765 66567788999999999999765 777778888876543
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.00 E-value=5.6e-10 Score=115.46 Aligned_cols=138 Identities=15% Similarity=0.075 Sum_probs=96.7
Q ss_pred cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCc--cceeeeeecccCcCCCcee
Q 002883 559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRN--LVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~ 636 (871)
.+|.+....+.|..+.||++... +|+.+++|+.... ....+.+|+++++.+.+.+ +.+++++.... +..
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~-----~~~ 90 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEA-----GRD 90 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS-----SCE
T ss_pred CCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC-----CCC
Confidence 34555443346667999999764 6778999997543 2245778999998885434 55677765432 457
Q ss_pred eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------
Q 002883 637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC---------------------------- 688 (871)
Q Consensus 637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------- 688 (871)
++||||++|.++. ... .+ ...++.++++.+..||+..
T Consensus 91 ~~v~e~i~G~~l~--~~~----------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
T 1nd4_A 91 WLLLGEVPGQDLL--SSH----------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQ 155 (264)
T ss_dssp EEEEECCSSEETT--TSC----------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCT
T ss_pred EEEEEecCCcccC--cCc----------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccc
Confidence 9999999998874 211 11 1256677778888888642
Q ss_pred ---------------------------CCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883 689 ---------------------------HTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL 720 (871)
Q Consensus 689 ---------------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 720 (871)
...++|||++|.||++++++.+.|+|||.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 156 DDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999998864
No 410
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.99 E-value=2.5e-10 Score=120.91 Aligned_cols=193 Identities=15% Similarity=0.162 Sum_probs=124.2
Q ss_pred CceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcC-CCCc--cceeeeeecccCcCCCceeeEEE
Q 002883 564 ANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSI-RHRN--LVKIITSCSSIDTRGNEFKALVY 640 (871)
Q Consensus 564 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~~~~~~~~~~~~~~~~~~lv~ 640 (871)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+ .+.. +.+++..... .......|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP--SETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC--CSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CCCCCcceEEE
Confidence 4678999999999864 45889986432 2346788999999887 3333 3444443221 11113458999
Q ss_pred eccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------
Q 002883 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-------------------------------- 688 (871)
Q Consensus 641 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------- 688 (871)
|+++|.++.+.... .++..+...++.+++..++.||+..
T Consensus 96 ~~i~G~~l~~~~~~---------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (304)
T 3sg8_A 96 TKIKGVPLTPLLLN---------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELK 166 (304)
T ss_dssp ECCCCEECCHHHHH---------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSC
T ss_pred cccCCeECCccccc---------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCC
Confidence 99999888754321 3677788888888888888888621
Q ss_pred -----------------------CCCeEecCCCCCceeeCC--CCceEEeecccceecCCCCCCcccc-----------c
Q 002883 689 -----------------------HTSIVHCDLKPSNVLLDN--EMVAHVGDFGLSRLLHDNSPDQTST-----------S 732 (871)
Q Consensus 689 -----------------------~~~ivH~Dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~-----------~ 732 (871)
...++|+|++|.||+++. ...+.++||+.+..-+...+..... .
T Consensus 167 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 246 (304)
T 3sg8_A 167 GPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVS 246 (304)
T ss_dssp HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHH
T ss_pred cccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHH
Confidence 136899999999999988 5668899999987643210000000 0
Q ss_pred cccccccccC-cccccCCCCCCccchhhHHHHHHHHHhCCCCCch
Q 002883 733 RVKGSIGYVA-PEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDD 776 (871)
Q Consensus 733 ~~~gt~~y~a-PE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 776 (871)
......++.. |+.... .....+.|++|.++|.+.+|..+|..
T Consensus 247 ~~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 247 KILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp HHHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 0000011111 221110 11225899999999999999988753
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.95 E-value=1.8e-10 Score=123.81 Aligned_cols=83 Identities=13% Similarity=0.164 Sum_probs=41.5
Q ss_pred CCCCCEEeCCCCcCCCCCccchh---cccCCceeeecCCcccccC----ccccCCCCCCCEEeCCCCcCCCCCcccccc-
Q 002883 367 LKGIQQLDLSENKLSGEIPTSLA---SCVGLEYLNFSDNSFQGPI----HSGFSSLKGLQDLDLSRNNFSGKIPMFLNT- 438 (871)
Q Consensus 367 l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~- 438 (871)
+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.|++.. +..+..+++|+.|+|++|.++...-..+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 45555555555555432222222 2456666666666665432 222234566777777777665322222222
Q ss_pred cccccEEecCCCc
Q 002883 439 FRFLQKLNLSFNN 451 (871)
Q Consensus 439 ~~~L~~L~l~~N~ 451 (871)
+ ...+++++|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 1 2456776666
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=2.3e-10 Score=123.08 Aligned_cols=65 Identities=20% Similarity=0.352 Sum_probs=38.5
Q ss_pred cccCCceeeecCCcccccCcccc---CCCCCCCEEeCCCCcCCCC----CcccccccccccEEecCCCcCcc
Q 002883 390 SCVGLEYLNFSDNSFQGPIHSGF---SSLKGLQDLDLSRNNFSGK----IPMFLNTFRFLQKLNLSFNNLEG 454 (871)
Q Consensus 390 ~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~l~~N~l~~~----~~~~~~~~~~L~~L~l~~N~l~~ 454 (871)
.+++|++|+|++|.+.+..+..+ ..+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.++.
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 35677777777777654322222 2456777777777776642 23333456677777777776654
No 413
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.90 E-value=3.5e-09 Score=115.02 Aligned_cols=145 Identities=18% Similarity=0.195 Sum_probs=105.8
Q ss_pred CCceeeccccceEEEEEECCCCcEEEEEEee--cccc-chHHHHHHHHHHHHcCC--CCccceeeeeecccCcCCCceee
Q 002883 563 SANLIGIGGYGYVYKGILGTEETNVAVKVLD--LQQR-GASKSFIAECEALRSIR--HRNLVKIITSCSSIDTRGNEFKA 637 (871)
Q Consensus 563 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~ 637 (871)
..+.++.|.++.||++... +..+++|+.. .... .....+.+|+++++.+. +..+++++.++.+... .+..|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~--~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV--IGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT--TSSCE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc--cCCeE
Confidence 4577899999999999875 4678888875 3221 12356788999999986 4557888887654321 13468
Q ss_pred EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------
Q 002883 638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC----------------------------- 688 (871)
Q Consensus 638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------- 688 (871)
+||||++|..+.+... ..++..+...++.+++++|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~~---------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQSL---------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKL 188 (359)
T ss_dssp EEEECCCCBCCCCTTC---------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCeecCCCcc---------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHh
Confidence 9999999877643111 13678888899999999999999731
Q ss_pred --------------------------CCCeEecCCCCCceeeCCCCc--eEEeeccccee
Q 002883 689 --------------------------HTSIVHCDLKPSNVLLDNEMV--AHVGDFGLSRL 720 (871)
Q Consensus 689 --------------------------~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~a~~ 720 (871)
...++|||++|.||+++.++. +.++||+.+..
T Consensus 189 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 189 SETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999987653 68999999875
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.58 E-value=3e-07 Score=97.76 Aligned_cols=137 Identities=18% Similarity=0.192 Sum_probs=101.5
Q ss_pred CCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCC----CccceeeeeecccCcCCCce
Q 002883 560 GFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRH----RNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 560 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~~ 635 (871)
.+...+.++.|..+.||++ +..+++|+..... ....+.+|+++++.+.+ ..+.+++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 5667788999999999998 5568899864322 23568899999988865 234455544 23
Q ss_pred eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCC--------------------------
Q 002883 636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCH-------------------------- 689 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-------------------------- 689 (871)
.|+||||++|.++.+.... .++..+...++.+++..++.||+...
T Consensus 102 ~~lvme~i~G~~l~~~~~~---------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQYH---------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLI 172 (320)
T ss_dssp SCEEEECCCCBCCCHHHHT---------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHH
T ss_pred cEEEEeecCCccccccccc---------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHH
Confidence 5899999999888743311 35677777888888888888885421
Q ss_pred ----------------------------------CCeEecCCCCCceeeCCCCceEEeecccceec
Q 002883 690 ----------------------------------TSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLL 721 (871)
Q Consensus 690 ----------------------------------~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 721 (871)
+.++|+|++|.||+++.+..+.++||+.+..-
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 173 SILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 24699999999999998766799999998653
No 415
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.48 E-value=6.4e-07 Score=92.84 Aligned_cols=137 Identities=16% Similarity=0.113 Sum_probs=99.2
Q ss_pred ceeeccccc-eEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccCcCCCceeeEEEec
Q 002883 565 NLIGIGGYG-YVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEFKALVYEF 642 (871)
Q Consensus 565 ~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~ 642 (871)
+.+..|..+ .||+......+..+++|+-... ....+.+|++.++.+. +--+.++++++.+. +..|+|||+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~-----~~~~lvme~ 101 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTP-----DDAWLLTTA 101 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEET-----TEEEEEEEC
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEEC-----CeEEEEEEe
Confidence 345556655 6999888777888999987533 3456788999998873 33466777776544 457999999
Q ss_pred cCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------
Q 002883 643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC---------------------------------- 688 (871)
Q Consensus 643 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------------- 688 (871)
++|.++.+...... .....++.+++..++.||...
T Consensus 102 l~G~~~~~~~~~~~-----------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (272)
T 4gkh_A 102 IPGKTAFQVLEEYP-----------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDE 170 (272)
T ss_dssp CCSEEHHHHHHHCG-----------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGG
T ss_pred eCCccccccccCCH-----------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccc
Confidence 99988887654321 123456667777777777532
Q ss_pred ---------------------CCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883 689 ---------------------HTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL 720 (871)
Q Consensus 689 ---------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 720 (871)
...++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 171 ~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 171 RNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp GTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12389999999999999887778999998864
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=2.2e-08 Score=96.99 Aligned_cols=12 Identities=17% Similarity=-0.020 Sum_probs=5.3
Q ss_pred CCCCcEEEccCC
Q 002883 271 LLKLQVLSLFGN 282 (871)
Q Consensus 271 l~~L~~L~L~~n 282 (871)
.++|++|+|++|
T Consensus 35 ~~~L~~L~L~~n 46 (185)
T 1io0_A 35 DPDLEEVNLNNI 46 (185)
T ss_dssp CTTCCEEECTTC
T ss_pred CCCCCEEEecCC
Confidence 344444444444
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.46 E-value=1.5e-08 Score=98.29 Aligned_cols=13 Identities=23% Similarity=0.309 Sum_probs=5.6
Q ss_pred ccccEEecCCCcC
Q 002883 440 RFLQKLNLSFNNL 452 (871)
Q Consensus 440 ~~L~~L~l~~N~l 452 (871)
++|++|+|++|.+
T Consensus 151 ~~L~~L~L~~n~i 163 (185)
T 1io0_A 151 TTLLKFGYHFTQQ 163 (185)
T ss_dssp SSCCEEECCCSSH
T ss_pred CCcCEEeccCCCC
Confidence 3444444444443
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=7.1e-08 Score=98.04 Aligned_cols=66 Identities=29% Similarity=0.376 Sum_probs=35.7
Q ss_pred cCCCCCCEEecCCCcCCCC--CcccccCCCCCcEEeccCCCCCCCCccccCCCC--CCCEEeCCCCcCCCCC
Q 002883 317 GNCLQLQKLDLSDNNLSGT--IPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLK--GIQQLDLSENKLSGEI 384 (871)
Q Consensus 317 ~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~ 384 (871)
.++++|+.|+|++|+|++. ++..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+..
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 3456667777777776642 234444566666666666666532 1222222 5666666666655433
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=2.8e-08 Score=101.07 Aligned_cols=105 Identities=21% Similarity=0.227 Sum_probs=63.8
Q ss_pred ccCCCcCce--eeCCCCcccccCCc----cccCCcccceeeccCccccC--CCCccccccccccccccccccccCCCCcc
Q 002883 34 LGNLFKLVG--LGLTGNNYTGSIPQ----SLSNLSFLQQLSLSENSLSG--NIPSELGLLKQLNMFQVSANYLTGSIPIQ 105 (871)
Q Consensus 34 ~~~l~~L~~--L~L~~n~l~~~~p~----~~~~l~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 105 (871)
|...+.|.. ++++.|+.. .++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 444445554 566666433 2222 22456777777777777774 3345566777777777777777743 22
Q ss_pred ccccC--CCceeeeecccccccccc------ccccCCCCccEEE
Q 002883 106 LFNIS--SMDYFAVTQNKLVGEIPH------YVGFTLPNIRVLL 141 (871)
Q Consensus 106 ~~~l~--~L~~L~l~~n~l~~~~~~------~~~~~l~~L~~L~ 141 (871)
+..+. +|++|+|++|.+.+.+|. .+...+|+|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 33333 777788888777765552 2344788888876
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.36 E-value=1.7e-06 Score=90.00 Aligned_cols=76 Identities=17% Similarity=0.102 Sum_probs=59.2
Q ss_pred CCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCC---ccceeeeeecccCcCCCceeeEE
Q 002883 563 SANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHR---NLVKIITSCSSIDTRGNEFKALV 639 (871)
Q Consensus 563 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv 639 (871)
..+.++.|.++.||+++.. +|+.+++|+...........+.+|++.++.+.+. .+++++++. ..++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~lv 88 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEE
T ss_pred ceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEEE
Confidence 3578999999999999875 6888999997543333346789999999999764 577777652 24899
Q ss_pred EeccCCCCH
Q 002883 640 YEFMPNGSL 648 (871)
Q Consensus 640 ~e~~~~gsL 648 (871)
|||++++++
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999999874
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.34 E-value=2.1e-06 Score=90.53 Aligned_cols=137 Identities=15% Similarity=0.145 Sum_probs=92.8
Q ss_pred CceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCC---ccceeeeeecccCcCCCceeeEEE
Q 002883 564 ANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHR---NLVKIITSCSSIDTRGNEFKALVY 640 (871)
Q Consensus 564 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv~ 640 (871)
.+.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .+.+++.+... ..+..++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----SDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC----TTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc----CCCceEEEE
Confidence 466888888899998 4568889853 223356788999999998642 35566655431 124468999
Q ss_pred eccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhc---------------------------------
Q 002883 641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHH--------------------------------- 687 (871)
Q Consensus 641 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~--------------------------------- 687 (871)
|+++|.++.+..-. .++..+...++.++++.++.||+.
T Consensus 93 e~i~G~~l~~~~~~---------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~ 163 (306)
T 3tdw_A 93 RKVQGQILGEDGMA---------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPL 163 (306)
T ss_dssp ECCCSEECHHHHHT---------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGG
T ss_pred eccCCeECchhhhh---------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccc
Confidence 99999888763211 234444455555555555555532
Q ss_pred ------------------------CCCCeEecCCCCCceeeCC---CCc-eEEeeccccee
Q 002883 688 ------------------------CHTSIVHCDLKPSNVLLDN---EMV-AHVGDFGLSRL 720 (871)
Q Consensus 688 ------------------------~~~~ivH~Dlkp~Nill~~---~~~-~kl~Dfg~a~~ 720 (871)
....++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 164 l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 164 LDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp SCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred cchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2236799999999999987 355 48999998864
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.18 E-value=7.3e-06 Score=88.33 Aligned_cols=150 Identities=13% Similarity=0.125 Sum_probs=89.6
Q ss_pred CCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCc--cceeeeeecccCcCCCceeeE
Q 002883 561 FSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRN--LVKIITSCSSIDTRGNEFKAL 638 (871)
Q Consensus 561 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~l 638 (871)
....+.++.|....+|+... ++..+++|+.... ..+.+|+.+++.+.... +.+++.++...+ +..|+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~----g~~~l 111 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE----SLTYC 111 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS----SCEEE
T ss_pred CceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC----CCeEE
Confidence 34467789999999999986 4788999987432 35788999998885433 455665543321 35689
Q ss_pred EEeccCCCCHHHH---------------h---hcccccc-------ccc---CCCCHHHH--------------------
Q 002883 639 VYEFMPNGSLENW---------------L---NQKEDEQ-------NQR---PKLNLMQR-------------------- 670 (871)
Q Consensus 639 v~e~~~~gsL~~~---------------l---~~~~~~~-------~~~---~~l~~~~~-------------------- 670 (871)
||||++|.++.+. + +...... ... ..-.|...
T Consensus 112 v~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~ 191 (362)
T 3ovc_A 112 ISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTV 191 (362)
T ss_dssp EEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTT
T ss_pred EEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999998665321 1 1100000 000 00001111
Q ss_pred -HHHHHHHHHHHHHHhhcC-CCCeEecCCCCCceeeCCCCceEEeecccceec
Q 002883 671 -LSIAIDVANVLEYLHHHC-HTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLL 721 (871)
Q Consensus 671 -~~i~~~i~~~L~~LH~~~-~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 721 (871)
......+.....++.... .+.++|+|++|.||+++.++.+.|+||+.+..-
T Consensus 192 ~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 192 SASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 011111222223332221 147899999999999988777889999998764
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.07 E-value=6.9e-07 Score=83.99 Aligned_cols=92 Identities=13% Similarity=0.217 Sum_probs=55.2
Q ss_pred CCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCcc-ccCCCCcccccc----cccccccccccc-ccCCCC
Q 002883 30 IPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENS-LSGNIPSELGLL----KQLNMFQVSANY-LTGSIP 103 (871)
Q Consensus 30 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~l----~~L~~L~l~~n~-l~~~~~ 103 (871)
+|.....-.+|+.|+|+++.|+...-..+..+++|++|+|++|. |+...-..+..+ ++|++|+|++|. +++..-
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 34433333456677777766665555566667777777777764 543222334443 357777777764 665555
Q ss_pred ccccccCCCceeeeeccc
Q 002883 104 IQLFNISSMDYFAVTQNK 121 (871)
Q Consensus 104 ~~~~~l~~L~~L~l~~n~ 121 (871)
..+..+++|+.|+++++.
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 556667777777777765
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.00 E-value=1.9e-05 Score=86.67 Aligned_cols=76 Identities=17% Similarity=0.097 Sum_probs=48.8
Q ss_pred CceeeccccceEEEEEECCCCcEEEEEEeecccc-------chHHHHHHHHHHHHcCCC--C-ccceeeeeecccCcCCC
Q 002883 564 ANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR-------GASKSFIAECEALRSIRH--R-NLVKIITSCSSIDTRGN 633 (871)
Q Consensus 564 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~~ 633 (871)
.+.+|.|..+.||+++...+++.|+||....... ....++..|+++++.+.. + .+.+++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~----- 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--T----- 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--T-----
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--C-----
Confidence 5679999999999998765678899998643211 123456789998887732 3 344555432 1
Q ss_pred ceeeEEEeccCCC
Q 002883 634 EFKALVYEFMPNG 646 (871)
Q Consensus 634 ~~~~lv~e~~~~g 646 (871)
...++|||++++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 2247999999763
No 425
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.99 E-value=1.4e-05 Score=86.41 Aligned_cols=84 Identities=6% Similarity=-0.050 Sum_probs=54.6
Q ss_pred Ccee-eccccceEEEEEEC--C----CCcEEEEEEeeccc---cchHHHHHHHHHHHHcCC-C--CccceeeeeecccCc
Q 002883 564 ANLI-GIGGYGYVYKGILG--T----EETNVAVKVLDLQQ---RGASKSFIAECEALRSIR-H--RNLVKIITSCSSIDT 630 (871)
Q Consensus 564 ~~~l-g~G~~g~V~~~~~~--~----~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~ 630 (871)
.+.| +.|....+|+.... . +++.+++|+..... ......+.+|+.+++.+. + -.+.+++.++.+...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 78889999998753 1 15678999875432 101245678888888873 2 356777776543211
Q ss_pred CCCceeeEEEeccCCCCHH
Q 002883 631 RGNEFKALVYEFMPNGSLE 649 (871)
Q Consensus 631 ~~~~~~~lv~e~~~~gsL~ 649 (871)
.+..|+||||++|.++.
T Consensus 105 --~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 --LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp --TSSCEEEEECCCCBCCC
T ss_pred --cCCceEEEEecCCCChh
Confidence 13457999999987654
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.96 E-value=1.7e-06 Score=81.28 Aligned_cols=84 Identities=10% Similarity=0.034 Sum_probs=50.3
Q ss_pred CCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCc-CCCCCccchhcc----cCCceeeecCCc-ccccCccccCCCCC
Q 002883 344 SSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENK-LSGEIPTSLASC----VGLEYLNFSDNS-FQGPIHSGFSSLKG 417 (871)
Q Consensus 344 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~ 417 (871)
.+|+.||++++.|++..-..+..+++|++|+|++|. |++..-..++.+ ++|++|+|++|. |++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356666666666665555556666677777777764 554333334432 357777777763 66544455566677
Q ss_pred CCEEeCCCCc
Q 002883 418 LQDLDLSRNN 427 (871)
Q Consensus 418 L~~L~l~~N~ 427 (871)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777776664
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.78 E-value=8.5e-05 Score=77.36 Aligned_cols=79 Identities=16% Similarity=0.125 Sum_probs=56.8
Q ss_pred CCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCC---CccceeeeeecccCcCCCcee
Q 002883 560 GFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRH---RNLVKIITSCSSIDTRGNEFK 636 (871)
Q Consensus 560 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~~~~~ 636 (871)
....++.+|.|..+.||+++.. +|+.|++|+...........+..|++.|+.+.- -.+++++++ +..
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~---------~~~ 85 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW---------DDR 85 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---------ETT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec---------cCc
Confidence 3445678999999999999986 788999998754444334567889999988742 234555554 123
Q ss_pred eEEEeccCCCCH
Q 002883 637 ALVYEFMPNGSL 648 (871)
Q Consensus 637 ~lv~e~~~~gsL 648 (871)
++||||++++..
T Consensus 86 ~lv~e~l~~~~~ 97 (288)
T 3f7w_A 86 TLAMEWVDERPP 97 (288)
T ss_dssp EEEEECCCCCCC
T ss_pred eEEEEeecccCC
Confidence 789999987653
No 428
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.72 E-value=0.00012 Score=78.38 Aligned_cols=150 Identities=15% Similarity=0.105 Sum_probs=79.7
Q ss_pred ceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC--CCccceeeeeecccC-cCCCceeeEEEe
Q 002883 565 NLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR--HRNLVKIITSCSSID-TRGNEFKALVYE 641 (871)
Q Consensus 565 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~-~~~~~~~~lv~e 641 (871)
+.++.|..+.||++... +..+++|+.... ...+..|+++++.+. .-.+++++....... ....+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEET--TEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeC--CCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 44666778999999874 335899998642 233445666665552 113344443210000 001245789999
Q ss_pred ccCCCCHH-----------H---Hhhcccccc--cc-----cCCCCHHH-------------------------------
Q 002883 642 FMPNGSLE-----------N---WLNQKEDEQ--NQ-----RPKLNLMQ------------------------------- 669 (871)
Q Consensus 642 ~~~~gsL~-----------~---~l~~~~~~~--~~-----~~~l~~~~------------------------------- 669 (871)
|++|.++. . .++...... .. .....|..
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 0 111111000 00 00012211
Q ss_pred HHHHHHHHHHHHHHHhh----------cCCCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883 670 RLSIAIDVANVLEYLHH----------HCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL 720 (871)
Q Consensus 670 ~~~i~~~i~~~L~~LH~----------~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 720 (871)
...+..++..++.+|++ .....++|||+++.||+++.++.+.++||+.+..
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 11112234446666663 1235899999999999998888999999998753
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.57 E-value=0.00035 Score=73.00 Aligned_cols=142 Identities=17% Similarity=0.111 Sum_probs=89.1
Q ss_pred CceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC---CCccceeeeeecccCcCCCceeeEEE
Q 002883 564 ANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR---HRNLVKIITSCSSIDTRGNEFKALVY 640 (871)
Q Consensus 564 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~lv~ 640 (871)
.+.|+.|....+|+... ++..+++|+.... ....+..|++.++.+. ...+++++.+.... +..++||
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~-----g~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ-----GHSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS-----SEEEEEE
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC-----CceEEEE
Confidence 46789999999999986 4678889987643 3467888999988873 35677888775432 4579999
Q ss_pred eccCCCCHH--------H---Hhhcccc--ccc-----------c--cCCCCHHHHH---HHH----------------H
Q 002883 641 EFMPNGSLE--------N---WLNQKED--EQN-----------Q--RPKLNLMQRL---SIA----------------I 675 (871)
Q Consensus 641 e~~~~gsL~--------~---~l~~~~~--~~~-----------~--~~~l~~~~~~---~i~----------------~ 675 (871)
||+++..+. + .++.... ... + ...-+|.... ++. .
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 999987642 1 1222111 000 0 0012344322 111 1
Q ss_pred HHHHH-HHHHhh-cCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883 676 DVANV-LEYLHH-HCHTSIVHCDLKPSNVLLDNEMVAHVGDFG 716 (871)
Q Consensus 676 ~i~~~-L~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 716 (871)
+++.. ...|.. ...+.+||+|+.+.|++++.++ +.++||.
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 223322 2246899999999999999887 8899974
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.55 E-value=7.7e-05 Score=66.87 Aligned_cols=62 Identities=16% Similarity=0.270 Sum_probs=45.5
Q ss_pred ceeeecCCccc-ccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCC
Q 002883 395 EYLNFSDNSFQ-GPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPS 458 (871)
Q Consensus 395 ~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~ 458 (871)
..++.+++.++ ..+|..+. ++|++|+|++|+|+...+..|..+++|+.|+|++|+|.|.+..
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l 73 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRL 73 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGG
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCcc
Confidence 36777777776 12333332 3688888888888877777888888899999999988887653
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.41 E-value=4e-05 Score=73.39 Aligned_cols=10 Identities=10% Similarity=0.189 Sum_probs=4.5
Q ss_pred CCCcEEEccC
Q 002883 272 LKLQVLSLFG 281 (871)
Q Consensus 272 ~~L~~L~L~~ 281 (871)
+.|+.|+|++
T Consensus 41 ~~L~~L~L~~ 50 (197)
T 1pgv_A 41 TDLKEVNINN 50 (197)
T ss_dssp SSCCEEECTT
T ss_pred CCccEEECCC
Confidence 3444444444
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.38 E-value=0.00056 Score=75.40 Aligned_cols=76 Identities=13% Similarity=0.037 Sum_probs=47.7
Q ss_pred CCeEecCCCCCceeeCCCCceEEeecccceecCCCCCCcccccccc--ccccccCcccccCC---CCCCccchhhHHHHH
Q 002883 690 TSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVK--GSIGYVAPEYGALG---EVSTHGDEYSFGILM 764 (871)
Q Consensus 690 ~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~---~~~~~~DiwSlG~il 764 (871)
..++|||++|.|||++.++ ++++||+.+..-... ....... -...|++|+..... ......++.+....+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~----~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG----FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT 306 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH----HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH----HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence 4899999999999998776 999999998753211 0000011 12346666654311 112234556788888
Q ss_pred HHHHhC
Q 002883 765 LEMFTG 770 (871)
Q Consensus 765 ~elltG 770 (871)
|+.+++
T Consensus 307 ~~~y~~ 312 (420)
T 2pyw_A 307 WNLFNK 312 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888764
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.37 E-value=7.4e-05 Score=71.55 Aligned_cols=87 Identities=14% Similarity=0.231 Sum_probs=41.1
Q ss_pred CCCCCCCEEeCCCCcCCCC----CccchhcccCCceeeecCCccccc----CccccCCCCCCCEEeCCCCc---CCC---
Q 002883 365 GRLKGIQQLDLSENKLSGE----IPTSLASCVGLEYLNFSDNSFQGP----IHSGFSSLKGLQDLDLSRNN---FSG--- 430 (871)
Q Consensus 365 ~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~---l~~--- 430 (871)
..-+.|+.|+|++|.|.+. +...+..-+.|++|+|++|.|... +..++..-+.|++|+|++|. +..
T Consensus 67 ~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~ 146 (197)
T 1pgv_A 67 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVE 146 (197)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHH
T ss_pred hhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHH
Confidence 3344455555555554422 222233344555555555555532 22234444557777776542 221
Q ss_pred -CCcccccccccccEEecCCCc
Q 002883 431 -KIPMFLNTFRFLQKLNLSFNN 451 (871)
Q Consensus 431 -~~~~~~~~~~~L~~L~l~~N~ 451 (871)
.+.+.+..-+.|+.|+++.|.
T Consensus 147 ~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 147 MDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHhCCCcCeEeccCCC
Confidence 122344445566666665443
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.24 E-value=0.00098 Score=69.71 Aligned_cols=74 Identities=8% Similarity=0.066 Sum_probs=45.2
Q ss_pred CCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccCcCCCceeeEE
Q 002883 561 FSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEFKALV 639 (871)
Q Consensus 561 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv 639 (871)
+.-.+.|+.|....+|++ ..+++|+....... .....+|+.+++.+. +.-..+++++..+ .-++|
T Consensus 20 ~~~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~-------~~~~v 85 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPA-------TGVMV 85 (301)
T ss_dssp CCSCEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT-------TCCEE
T ss_pred ccceeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECC-------CCEEE
Confidence 333688999999999998 45899988543211 112346777777763 2222455554321 23689
Q ss_pred Eecc-CCCCH
Q 002883 640 YEFM-PNGSL 648 (871)
Q Consensus 640 ~e~~-~~gsL 648 (871)
+||+ +|.++
T Consensus 86 ~e~i~~g~~l 95 (301)
T 3dxq_A 86 TRYIAGAQTM 95 (301)
T ss_dssp EECCTTCEEC
T ss_pred EeecCCCccC
Confidence 9999 66544
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.23 E-value=0.00039 Score=62.22 Aligned_cols=63 Identities=19% Similarity=0.186 Sum_probs=49.7
Q ss_pred CEEeCCCCcCC-CCCcccccccccccEEecCCCcCcccCCCC-cccccccceeccCCCCCccCCCcc
Q 002883 419 QDLDLSRNNFS-GKIPMFLNTFRFLQKLNLSFNNLEGEVPSE-GVFKNVRAVSIIGNNKLCGGSPEL 483 (871)
Q Consensus 419 ~~L~l~~N~l~-~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~C~~~~~~ 483 (871)
..++.+++.|+ ..+|..+. ++|+.|+|++|.|+...+.. ..++.++.+++.+|||.|+|...|
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~ 75 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVP 75 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHH
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHH
Confidence 47899999997 34565443 36999999999999876654 446788999999999999997543
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.18 E-value=0.0013 Score=69.41 Aligned_cols=169 Identities=12% Similarity=0.095 Sum_probs=88.1
Q ss_pred ccCHHHHHHhhcCCCC-----CceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCc--cce
Q 002883 548 KISYAELLKATEGFSS-----ANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRN--LVK 620 (871)
Q Consensus 548 ~~~~~~~~~~~~~y~~-----~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 620 (871)
.++.+++.....+|.+ .+.|+.|....+|++... ++ .+++|+..... ....+..|+.+++.+.... +.+
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCc
Confidence 3555666666666655 244667888899999874 33 68899886421 1234566777777763212 333
Q ss_pred eeeeecccC-cCCCceeeEEEeccCCCCHHH-----------H---hhccccccc-cc-CCC---CHHHHHH--------
Q 002883 621 IITSCSSID-TRGNEFKALVYEFMPNGSLEN-----------W---LNQKEDEQN-QR-PKL---NLMQRLS-------- 672 (871)
Q Consensus 621 ~~~~~~~~~-~~~~~~~~lv~e~~~~gsL~~-----------~---l~~~~~~~~-~~-~~l---~~~~~~~-------- 672 (871)
++....... ..-.+..+++|+|++|..+.. . ++....... .. ... .|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 332210000 000134689999998865311 0 111100000 00 000 1111000
Q ss_pred ----HHHHHHHHHHHHhhc----CCCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883 673 ----IAIDVANVLEYLHHH----CHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL 720 (871)
Q Consensus 673 ----i~~~i~~~L~~LH~~----~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 720 (871)
+...+...++++++. ...+++|+|+.+.||+++++..+.++||+.+..
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234455555532 134799999999999998876668999998763
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.09 E-value=0.0013 Score=72.58 Aligned_cols=75 Identities=15% Similarity=0.081 Sum_probs=47.8
Q ss_pred CceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCcc-ceeeeeecccCcCCCceeeEEEec
Q 002883 564 ANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNL-VKIITSCSSIDTRGNEFKALVYEF 642 (871)
Q Consensus 564 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 642 (871)
.+.|+.|-...+|++.....+..+++|+........ -...+|..+++.+...++ .++++.+.. ..||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~~---------G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFTN---------GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEETT---------EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeCC---------eEEEEe
Confidence 456888888999999986445789999874332211 122578888888854333 566666421 259999
Q ss_pred cCCCCH
Q 002883 643 MPNGSL 648 (871)
Q Consensus 643 ~~~gsL 648 (871)
++|.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987544
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.06 E-value=0.0014 Score=70.38 Aligned_cols=147 Identities=13% Similarity=0.124 Sum_probs=83.9
Q ss_pred CceeeccccceEEEEEECC-------CCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccCcCCCce
Q 002883 564 ANLIGIGGYGYVYKGILGT-------EETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 564 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 635 (871)
.+.+..|-...+|++.... +++.|++|+..... .....+.+|.++++.+. +.-..++++++..
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~-------- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE-------- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT--------
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC--------
Confidence 3567778889999998742 35789999874322 23455668999998873 3334666665432
Q ss_pred eeEEEeccCCCCHHH-----------H---hhccccc-ccccCCC--CHHHHHHHHHHHHH-------------------
Q 002883 636 KALVYEFMPNGSLEN-----------W---LNQKEDE-QNQRPKL--NLMQRLSIAIDVAN------------------- 679 (871)
Q Consensus 636 ~~lv~e~~~~gsL~~-----------~---l~~~~~~-~~~~~~l--~~~~~~~i~~~i~~------------------- 679 (871)
.+||||++|.++.. . +.+-... ....... -+.++.++..++..
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 28999998855431 1 1000000 0001111 23455555544322
Q ss_pred HHHHHhh----c-CCCCeEecCCCCCceeeCCC----CceEEeeccccee
Q 002883 680 VLEYLHH----H-CHTSIVHCDLKPSNVLLDNE----MVAHVGDFGLSRL 720 (871)
Q Consensus 680 ~L~~LH~----~-~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfg~a~~ 720 (871)
.+..|.+ . ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2333322 1 23479999999999999876 7899999998864
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.06 E-value=0.0011 Score=72.84 Aligned_cols=74 Identities=18% Similarity=0.167 Sum_probs=49.3
Q ss_pred CceeeccccceEEEEEECC-------CCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccCcCCCce
Q 002883 564 ANLIGIGGYGYVYKGILGT-------EETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 564 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 635 (871)
.+.|+.|....||++.... +++.|++|+.... .....+.+|..+++.+. +.-.+++++.+..
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~-------- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG-------- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT--------
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC--------
Confidence 3567888889999998753 2578999998432 11245567999888874 3334566665421
Q ss_pred eeEEEeccCCCCH
Q 002883 636 KALVYEFMPNGSL 648 (871)
Q Consensus 636 ~~lv~e~~~~gsL 648 (871)
.+|+||++|.++
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 389999986443
No 440
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.05 E-value=0.0035 Score=66.32 Aligned_cols=168 Identities=12% Similarity=0.111 Sum_probs=89.2
Q ss_pred cccCHHHHHHhhcCCCC-----CceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCC--ccc
Q 002883 547 LKISYAELLKATEGFSS-----ANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHR--NLV 619 (871)
Q Consensus 547 ~~~~~~~~~~~~~~y~~-----~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv 619 (871)
...+.+.+......|.+ .+.++ |....||++... +|+.+++|+...... ....+..|..+++.+... .++
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeec
Confidence 34455555544444432 34566 888899988764 466799999864321 345667788888777321 244
Q ss_pred eeeeeecccC-cCCCceeeEEEeccCCCCHH-----HH---------hhccccc--ccccCCCCHHHH----HH------
Q 002883 620 KIITSCSSID-TRGNEFKALVYEFMPNGSLE-----NW---------LNQKEDE--QNQRPKLNLMQR----LS------ 672 (871)
Q Consensus 620 ~~~~~~~~~~-~~~~~~~~lv~e~~~~gsL~-----~~---------l~~~~~~--~~~~~~l~~~~~----~~------ 672 (871)
+++.. .... ....+..++|||+++|.++. .+ ++..... ....+..++... ..
T Consensus 86 ~~~~~-~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (328)
T 1zyl_A 86 APVAF-NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDAT 164 (328)
T ss_dssp CCCCB-TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCS
T ss_pred ceeec-CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcC
Confidence 44433 1100 00124568899999875431 11 1110000 001111222111 00
Q ss_pred ---------HHHHHHHHHHHHhhc----CCCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883 673 ---------IAIDVANVLEYLHHH----CHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL 720 (871)
Q Consensus 673 ---------i~~~i~~~L~~LH~~----~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 720 (871)
+...+...++.+.+. ....++|||+++.||+++ + .+.++||+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 165 LIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 111111223333221 234789999999999998 4 899999998764
No 441
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.85 E-value=0.007 Score=64.17 Aligned_cols=145 Identities=12% Similarity=0.040 Sum_probs=73.5
Q ss_pred ceeeccccce-EEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-C-CccceeeeeecccCcCCCceeeEEEe
Q 002883 565 NLIGIGGYGY-VYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-H-RNLVKIITSCSSIDTRGNEFKALVYE 641 (871)
Q Consensus 565 ~~lg~G~~g~-V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~niv~~~~~~~~~~~~~~~~~~lv~e 641 (871)
+.++.|.... +|+.... ++..+++|....... ..+..|+.+++.+. + -.+.+++.+.... + ++|||
T Consensus 24 ~~l~gg~s~~~~~r~~~~-~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~-----g--~ll~e 92 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSP-TGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR-----G--LLLIE 92 (333)
T ss_dssp CC--------CCEEEECT-TCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT-----T--EEEEC
T ss_pred eECCCCCCCceEEEEEcC-CCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC-----C--EEEEe
Confidence 3455554444 6777642 356777887643321 23345677666663 2 2355666542211 2 68999
Q ss_pred ccCCCCHHHHhhccccc-------------------ccccCCCCHHHHH-------H-H------------HHHHHHHHH
Q 002883 642 FMPNGSLENWLNQKEDE-------------------QNQRPKLNLMQRL-------S-I------------AIDVANVLE 682 (871)
Q Consensus 642 ~~~~gsL~~~l~~~~~~-------------------~~~~~~l~~~~~~-------~-i------------~~~i~~~L~ 682 (871)
++++.++.+++...... ....+.++..... . + ...+...+.
T Consensus 93 ~l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 172 (333)
T 3csv_A 93 DLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFA 172 (333)
T ss_dssp CCCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHH
T ss_pred eCCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 99877776655432110 0000112221100 0 0 011112222
Q ss_pred HHhh---cCCCCeEecCCCCCceeeCCC----CceEEeeccccee
Q 002883 683 YLHH---HCHTSIVHCDLKPSNVLLDNE----MVAHVGDFGLSRL 720 (871)
Q Consensus 683 ~LH~---~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfg~a~~ 720 (871)
.+.+ .....++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 173 ~l~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 173 QILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HHHHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 2211 123489999999999999874 6789999998875
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.47 E-value=0.0045 Score=66.73 Aligned_cols=74 Identities=14% Similarity=0.147 Sum_probs=43.6
Q ss_pred ceeeccccceEEEEEECC--------CCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCc-cceeeeeecccCcCCCce
Q 002883 565 NLIGIGGYGYVYKGILGT--------EETNVAVKVLDLQQRGASKSFIAECEALRSIRHRN-LVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 565 ~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 635 (871)
+.++.|....+|++.... .++.+++|+....... ......|.++++.+.... +.++++...
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~~--------- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTFN--------- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEET---------
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEecC---------
Confidence 457788888999998753 1268999987543221 112356888888774222 446665431
Q ss_pred eeEEEeccCCCCH
Q 002883 636 KALVYEFMPNGSL 648 (871)
Q Consensus 636 ~~lv~e~~~~gsL 648 (871)
-++||||++|.++
T Consensus 109 ~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 GGRIEEWLYGDPL 121 (369)
T ss_dssp TEEEEECCCSEEC
T ss_pred CcEEEEEecCCcC
Confidence 2689999987543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.31 E-value=0.0068 Score=64.36 Aligned_cols=32 Identities=28% Similarity=0.366 Sum_probs=28.4
Q ss_pred CCeEecCCCCCceeeCCCCceEEeecccceec
Q 002883 690 TSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLL 721 (871)
Q Consensus 690 ~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 721 (871)
..++|+|+.+.||+++.++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47999999999999998888999999887653
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.19 E-value=0.016 Score=62.39 Aligned_cols=147 Identities=14% Similarity=0.127 Sum_probs=83.1
Q ss_pred ceeeccccceEEEEEECC-------CCcEEEEEEeeccccc-----------h-------HHHHHHHHHHHHcC-CCCcc
Q 002883 565 NLIGIGGYGYVYKGILGT-------EETNVAVKVLDLQQRG-----------A-------SKSFIAECEALRSI-RHRNL 618 (871)
Q Consensus 565 ~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~-----------~-------~~~~~~E~~~l~~l-~h~ni 618 (871)
+.+..|-...+|++.... .++.|.+++....... . ......|..+++.+ .+.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999988752 2467999987432211 0 11233588888877 34446
Q ss_pred ceeeeeecccCcCCCceeeEEEeccCCCCHHH--H------------hhccccc-ccccCCCC--HHHHHHHHHHHH---
Q 002883 619 VKIITSCSSIDTRGNEFKALVYEFMPNGSLEN--W------------LNQKEDE-QNQRPKLN--LMQRLSIAIDVA--- 678 (871)
Q Consensus 619 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~--~------------l~~~~~~-~~~~~~l~--~~~~~~i~~~i~--- 678 (871)
.++++++.. .+|+||++|.+|.. + +.+-... ........ +..+.++..++.
T Consensus 138 Pkl~~~~~~---------G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~ 208 (401)
T 3f2s_A 138 PKLYGIFPQ---------GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIK 208 (401)
T ss_dssp CCEEEEETT---------EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCC
T ss_pred CeEEEEeCC---------CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcc
Confidence 677776532 28999998755421 1 0000000 00011122 233333433321
Q ss_pred -------------------HHH----HHHhhc-CCCCeEecCCCCCceeeCCC------CceEEeeccccee
Q 002883 679 -------------------NVL----EYLHHH-CHTSIVHCDLKPSNVLLDNE------MVAHVGDFGLSRL 720 (871)
Q Consensus 679 -------------------~~L----~~LH~~-~~~~ivH~Dlkp~Nill~~~------~~~kl~Dfg~a~~ 720 (871)
..+ +++... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 209 FTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred CcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 222222 23479999999999999876 7899999998864
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.11 E-value=0.019 Score=55.03 Aligned_cols=99 Identities=15% Similarity=0.119 Sum_probs=64.7
Q ss_pred CCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccceecCCCC
Q 002883 646 GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNS 725 (871)
Q Consensus 646 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 725 (871)
-+|.+.++..+. +++++++|.++.|.+.+|.-.-.... . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~~------PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQ------PINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD------ 97 (229)
T ss_dssp EEHHHHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C---------
T ss_pred ccHHHHHHHcCC------CcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc------
Confidence 479999987653 69999999999999999887622111 1 1222346888899998887753 1110
Q ss_pred CCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh
Q 002883 726 PDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT 769 (871)
Q Consensus 726 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 769 (871)
.....+.|||... ...+.+.=|||+|+++|..+-
T Consensus 98 ---------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 ---------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ------------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred ---------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 1223566888753 345678899999999999986
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.02 E-value=0.073 Score=57.86 Aligned_cols=75 Identities=13% Similarity=0.114 Sum_probs=48.3
Q ss_pred CceeeccccceEEEEEECCC-------CcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccCcCCCce
Q 002883 564 ANLIGIGGYGYVYKGILGTE-------ETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEF 635 (871)
Q Consensus 564 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 635 (871)
.+.+..|-...+|++..... ++.|++|+...... ..-...+|..+++.+. +.-..++++.+.
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~--------- 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP--------- 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET---------
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC---------
Confidence 35677788899999987521 57899999754322 1123357888888773 333455565321
Q ss_pred eeEEEeccCCCCH
Q 002883 636 KALVYEFMPNGSL 648 (871)
Q Consensus 636 ~~lv~e~~~~gsL 648 (871)
-+.||||++|.++
T Consensus 145 ~~~I~efI~G~~l 157 (424)
T 3mes_A 145 EGRIEEFIDGEPL 157 (424)
T ss_dssp TEEEEECCCSEEC
T ss_pred CCEEEEEeCCccC
Confidence 2689999998653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.77 E-value=0.058 Score=58.57 Aligned_cols=30 Identities=27% Similarity=0.349 Sum_probs=25.5
Q ss_pred CeEecCCCCCceee------CCCCceEEeeccccee
Q 002883 691 SIVHCDLKPSNVLL------DNEMVAHVGDFGLSRL 720 (871)
Q Consensus 691 ~ivH~Dlkp~Nill------~~~~~~kl~Dfg~a~~ 720 (871)
.++|+|+.+.||++ +.+..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4566799999998864
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=81.48 E-value=0.36 Score=32.88 Aligned_cols=18 Identities=17% Similarity=0.209 Sum_probs=8.8
Q ss_pred hhHHHHHHHHHHHHHhhh
Q 002883 515 LSTCFIVFVFYQRRKRRR 532 (871)
Q Consensus 515 ~~~~~~~~~~~~rr~~~~ 532 (871)
++++.+.++++.||++++
T Consensus 24 ~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 24 LLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHhhhhHhh
Confidence 334444555555555443
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=81.03 E-value=0.36 Score=32.71 Aligned_cols=17 Identities=18% Similarity=0.342 Sum_probs=7.8
Q ss_pred hHHHHHHHHHHHHHhhh
Q 002883 516 STCFIVFVFYQRRKRRR 532 (871)
Q Consensus 516 ~~~~~~~~~~~rr~~~~ 532 (871)
.++.+++.+|.|||++.
T Consensus 25 vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 25 VVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHhheehhhhh
Confidence 33344445555555443
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=77.38 E-value=5.9 Score=37.90 Aligned_cols=87 Identities=17% Similarity=0.241 Sum_probs=62.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCc
Q 002883 664 KLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAP 743 (871)
Q Consensus 664 ~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP 743 (871)
..+....++++.+|+....+++. -+|--+.|+|++++.++.+++.-.|....+. |
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f~~~~~p~i~~RGik~~l~--------------------P 131 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFFTRDGLPIAKTRGLQNVVD--------------------P 131 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEECTTSCEEESCCEETTTBS--------------------C
T ss_pred hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEEcCCCCEEEEEccCccCCC--------------------C
Confidence 47889999999999988866653 4688899999999999999998777643221 1
Q ss_pred ccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhh
Q 002883 744 EYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEE 780 (871)
Q Consensus 744 E~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 780 (871)
. ..+...=.-.+=|++..+++++..|......
T Consensus 132 ~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 132 L-----PVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp C-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred C-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 1 1111111224678899999999999865444
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=76.89 E-value=0.42 Score=32.46 Aligned_cols=17 Identities=29% Similarity=0.509 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHhhhh
Q 002883 517 TCFIVFVFYQRRKRRRR 533 (871)
Q Consensus 517 ~~~~~~~~~~rr~~~~~ 533 (871)
++.+.+++++|||++++
T Consensus 25 ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 25 IVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHhhhhhhhh
Confidence 44445555555554443
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.24 E-value=0.42 Score=52.64 Aligned_cols=62 Identities=10% Similarity=-0.011 Sum_probs=18.0
Q ss_pred CCCceeeccccceEEEEEECCCCcEEEE------EEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeec
Q 002883 562 SSANLIGIGGYGYVYKGILGTEETNVAV------KVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCS 626 (871)
Q Consensus 562 ~~~~~lg~G~~g~V~~~~~~~~~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 626 (871)
.+.+.+| ||.||+|.+.....+||+ |..+... ......+.+|+.+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3456666 999999999765567888 6654221 223346788999999999999999887653
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=65.47 E-value=16 Score=34.96 Aligned_cols=84 Identities=15% Similarity=0.233 Sum_probs=60.4
Q ss_pred CCCHHHHHHHHHHHHHHHH-HHhhcCCCCeEecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccC
Q 002883 664 KLNLMQRLSIAIDVANVLE-YLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVA 742 (871)
Q Consensus 664 ~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 742 (871)
..+....++++.+|+.... +++. -+|--+.|+|++++.++.+++.-.|.-..+ +
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~l--------------------p 135 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVGVKESL--------------------P 135 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCEETTTB--------------------S
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcCCcccC--------------------C
Confidence 4788899999999888777 5554 467789999999999999999877754322 2
Q ss_pred cccccCCCCCCccchh-hHHHHHHHHHhCCCCCchhh
Q 002883 743 PEYGALGEVSTHGDEY-SFGILMLEMFTGKRPTDDMF 778 (871)
Q Consensus 743 PE~~~~~~~~~~~Diw-SlG~il~elltG~~pf~~~~ 778 (871)
|.-. ...|.| .+=|++..++.++..|++..
T Consensus 136 P~e~------~ee~fl~qyKali~all~~K~~Fe~l~ 166 (219)
T 4ano_A 136 PDEW------DDERLLREVKATVLALTEGEYRFDEYL 166 (219)
T ss_dssp SCSC------CHHHHHHHHHHHHHHHTTCSSCHHHHH
T ss_pred CCCC------CHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 2211 111222 46788889999999888643
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=51.12 E-value=32 Score=28.25 Aligned_cols=44 Identities=18% Similarity=0.116 Sum_probs=21.0
Q ss_pred CCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCC
Q 002883 381 SGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSR 425 (871)
Q Consensus 381 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 425 (871)
+.+....|.+|.+|+.+.+..+ ++.+...+|.++.+|+.+.+..
T Consensus 9 t~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 9 VGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3334444555555555555443 3334444555555555555543
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=49.35 E-value=36 Score=27.96 Aligned_cols=45 Identities=16% Similarity=0.028 Sum_probs=22.4
Q ss_pred cCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccC
Q 002883 236 ISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFG 281 (871)
Q Consensus 236 i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 281 (871)
++.+....|.++++|+.+.+..+ ++.+...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34444455555555555555543 2324445555555555555544
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=34.62 E-value=5.3e+02 Score=28.81 Aligned_cols=46 Identities=22% Similarity=0.117 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHH--HHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccce
Q 002883 667 LMQRLSIAIDVA--NVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSR 719 (871)
Q Consensus 667 ~~~~~~i~~~i~--~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 719 (871)
+.....+++.+| ..+.|+=.. +|=.++|||++.+|.+.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 445556666554 346666543 5778999999999999999999873
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=31.98 E-value=1.3e+02 Score=30.71 Aligned_cols=145 Identities=13% Similarity=0.047 Sum_probs=69.9
Q ss_pred CCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeee------------cccC-
Q 002883 563 SANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSC------------SSID- 629 (871)
Q Consensus 563 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~------------~~~~- 629 (871)
.++....|.. .||.+.. ++..|+||-.. ....+.+-.++...-.+.-|+..-+...- .+..
T Consensus 73 ~I~~s~~Gst-gvff~~t--d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~ 146 (342)
T 1cja_A 73 GIERSEKGTE-GLFFVET--ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSF 146 (342)
T ss_dssp EEEECCSTTS-CEEEEEE--SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSS
T ss_pred EEEeccCCCC-CeEEEEe--CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhh
Confidence 3444556654 4555554 46789999441 21223333444444445555533222110 0000
Q ss_pred ----cCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCC-CCeE-ecCCCCCcee
Q 002883 630 ----TRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCH-TSIV-HCDLKPSNVL 703 (871)
Q Consensus 630 ----~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~iv-H~Dlkp~Nil 703 (871)
........++|||.+|..|.+.-...... .+..+....+.+ +-+++.+..+.. ...+ +.--.+.|||
T Consensus 147 ~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~-----~f~~~~~k~LG~--Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 147 RVITTLANQANILLMELVRGITLNKLTTTSAPE-----VLTKSTMQQLGS--LMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp CHHHHHTTCSEEEEEECCCEEESTTCCSSSHHH-----HSCHHHHHHHHH--HHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred HHHHHhhcccceehhhhcCCCccccchhhhhhh-----hcCHHHHHhhch--hheehhhhcCCccCcccccCCCChhheE
Confidence 00112456999999876655432211000 133333222211 234555555432 1221 1235789999
Q ss_pred eCCCCc-eEEeeccccee
Q 002883 704 LDNEMV-AHVGDFGLSRL 720 (871)
Q Consensus 704 l~~~~~-~kl~Dfg~a~~ 720 (871)
++.++. +.++|-+.+..
T Consensus 220 ~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EESBTTCEEECSCCCCCC
T ss_pred EeCCCCeEEEEcCCcccc
Confidence 976554 88999998864
No 458
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=26.85 E-value=1.3e+02 Score=34.37 Aligned_cols=45 Identities=24% Similarity=0.135 Sum_probs=32.7
Q ss_pred HHHHHHHHHHH--HHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccce
Q 002883 668 MQRLSIAIDVA--NVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSR 719 (871)
Q Consensus 668 ~~~~~i~~~i~--~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 719 (871)
..+..++.++| ..+.|+=.. +|=.++|||++.+|.+.-+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 34445555544 345555443 6888999999999999999999873
No 459
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=24.62 E-value=5 Score=25.65 Aligned_cols=10 Identities=20% Similarity=0.418 Sum_probs=4.6
Q ss_pred HHHHHHHHHH
Q 002883 520 IVFVFYQRRK 529 (871)
Q Consensus 520 ~~~~~~~rr~ 529 (871)
+...+|.|||
T Consensus 25 l~~~~~iRRr 34 (35)
T 1iij_A 25 VVVGILIKRR 34 (35)
T ss_dssp TTTTHHHHHC
T ss_pred HHhheEEeec
Confidence 3444455544
Done!