Query         002883
Match_columns 871
No_of_seqs    848 out of 5890
Neff          9.8 
Searched_HMMs 13730
Date          Mon Mar 25 05:18:55 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002883.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/002883hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1yhwa1 d.144.1.7 (A:249-541)  100.0 3.2E-50 2.4E-54  420.4  24.7  249  559-857    20-269 (293)
  2 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 9.1E-51 6.6E-55  420.0  17.5  254  558-857     4-259 (271)
  3 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 3.1E-50 2.3E-54  418.0  19.9  261  558-864     7-272 (276)
  4 d2j4za1 d.144.1.7 (A:126-388)  100.0 3.9E-50 2.8E-54  413.7  18.9  246  559-857     6-254 (263)
  5 d1t4ha_ d.144.1.7 (A:) Protein 100.0 3.5E-49 2.6E-53  408.2  23.2  249  562-857    12-265 (270)
  6 d2jfla1 d.144.1.7 (A:21-308) S 100.0 1.7E-49 1.2E-53  414.7  19.1  252  559-857    12-268 (288)
  7 d2java1 d.144.1.7 (A:3-271) Se 100.0 6.8E-50   5E-54  413.7  15.3  258  559-857     4-265 (269)
  8 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 2.9E-49 2.1E-53  416.2  19.3  265  559-869    26-297 (299)
  9 d1opja_ d.144.1.7 (A:) Abelson 100.0 7.1E-50 5.1E-54  418.2  13.7  261  556-863    14-274 (287)
 10 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 6.5E-49 4.7E-53  406.3  19.8  256  559-864     5-261 (263)
 11 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 2.9E-49 2.1E-53  412.5  15.8  250  559-857     8-260 (288)
 12 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 6.1E-49 4.4E-53  419.1  18.2  200  558-777     5-206 (322)
 13 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 1.2E-48 8.7E-53  406.2  19.4  258  558-864    12-269 (272)
 14 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 8.7E-49 6.4E-53  413.3  16.9  252  558-857     8-263 (307)
 15 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0   2E-48 1.4E-52  406.0  18.4  259  559-864     8-271 (285)
 16 d1koaa2 d.144.1.7 (A:5915-6264 100.0 3.2E-48 2.3E-52  416.1  20.0  253  558-857    25-279 (350)
 17 d1mqba_ d.144.1.7 (A:) epha2 r 100.0 5.9E-48 4.3E-52  403.7  20.8  263  559-866     7-274 (283)
 18 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 6.5E-48 4.7E-52  396.2  19.8  254  558-861     3-257 (258)
 19 d1koba_ d.144.1.7 (A:) Twitchi 100.0 5.1E-48 3.7E-52  414.8  19.7  251  558-857    28-282 (352)
 20 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 4.1E-48   3E-52  404.4  18.5  265  559-863     7-275 (277)
 21 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 6.9E-48   5E-52  400.8  19.2  252  565-864    13-269 (277)
 22 d1jksa_ d.144.1.7 (A:) Death-a 100.0 1.7E-47 1.2E-51  402.7  22.3  251  559-857    10-270 (293)
 23 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 4.3E-48 3.1E-52  408.0  17.2  246  559-857    15-266 (309)
 24 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 2.1E-47 1.5E-51  407.7  18.1  263  558-860    36-322 (325)
 25 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 6.2E-47 4.5E-51  403.4  21.5  249  558-857     4-260 (337)
 26 d1fota_ d.144.1.7 (A:) cAMP-de 100.0 1.7E-46 1.2E-50  397.5  20.9  246  558-857     3-256 (316)
 27 d1tkia_ d.144.1.7 (A:) Titin,  100.0 1.6E-46 1.2E-50  399.0  20.6  252  558-857     4-257 (321)
 28 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 6.4E-47 4.6E-51  394.2  17.1  261  558-867     6-271 (273)
 29 d1phka_ d.144.1.7 (A:) gamma-s 100.0 1.6E-46 1.2E-50  389.8  19.6  252  558-857     2-269 (277)
 30 d1fmka3 d.144.1.7 (A:249-533)  100.0   1E-46 7.4E-51  392.6  17.1  256  558-862    16-271 (285)
 31 d1ywna1 d.144.1.7 (A:818-1166) 100.0 2.8E-46   2E-50  395.4  20.0  276  551-865     5-297 (299)
 32 d1u46a_ d.144.1.7 (A:) Activat 100.0 6.7E-47 4.9E-51  392.5  14.9  259  558-862     7-272 (273)
 33 d1xkka_ d.144.1.7 (A:) EGF rec 100.0   2E-46 1.4E-50  399.0  18.8  260  559-866     9-274 (317)
 34 d1byga_ d.144.1.7 (A:) Carboxy 100.0 2.6E-46 1.9E-50  384.8  17.7  253  558-864     6-259 (262)
 35 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 4.7E-46 3.5E-50  399.6  19.9  245  559-857    41-293 (350)
 36 d1omwa3 d.144.1.7 (A:186-549)  100.0 7.1E-46 5.1E-50  400.5  21.3  250  558-857     3-264 (364)
 37 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 3.6E-46 2.6E-50  398.4  18.4  257  558-857    10-271 (335)
 38 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 1.6E-46 1.2E-50  396.8  15.2  267  556-863    10-300 (301)
 39 d1xjda_ d.144.1.7 (A:) Protein 100.0 4.2E-46   3E-50  395.2  17.0  248  559-857     2-254 (320)
 40 d1vjya_ d.144.1.7 (A:) Type I  100.0   2E-45 1.4E-49  387.9  19.7  280  559-865     3-298 (303)
 41 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0   8E-46 5.8E-50  391.2  16.2  279  559-858     2-283 (298)
 42 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 3.7E-45 2.7E-49  385.6  19.2  267  558-865    12-297 (299)
 43 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 8.1E-46 5.9E-50  391.8  14.0  269  563-857     2-279 (299)
 44 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0   9E-45 6.6E-49  383.6  21.8  258  564-865    32-294 (311)
 45 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 1.3E-45 9.8E-50  392.0  15.5  281  558-857     6-292 (305)
 46 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0   3E-45 2.2E-49  388.3  17.0  264  559-866    10-287 (309)
 47 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0 7.2E-45 5.3E-49  385.7  19.4  269  557-865    21-308 (311)
 48 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 1.7E-44 1.3E-48  389.0  21.7  284  559-858     8-295 (345)
 49 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 1.3E-45 9.7E-50  383.6  10.1  240  559-857     4-254 (273)
 50 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 1.8E-44 1.3E-48  379.1  13.7  276  559-857     2-280 (286)
 51 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 9.4E-44 6.8E-48  384.2  19.0  280  558-858    17-301 (346)
 52 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 3.4E-44 2.5E-48  379.6  15.1  266  556-862    17-292 (308)
 53 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 5.7E-43 4.2E-47  373.8  22.1  285  558-857     9-304 (318)
 54 d1ckia_ d.144.1.7 (A:) Casein  100.0 8.9E-43 6.5E-47  368.6  19.6  263  559-864     7-278 (299)
 55 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 2.3E-42 1.7E-46  373.9  22.3  283  559-858    17-311 (355)
 56 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 3.9E-43 2.9E-47  379.2  15.2  275  560-857    21-302 (350)
 57 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0   3E-43 2.2E-47  377.5  14.1  274  559-857    35-318 (328)
 58 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 3.8E-43 2.8E-47  371.0  14.7  278  559-857     2-282 (292)
 59 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 6.7E-43 4.8E-47  378.5  16.9  280  558-857    17-300 (348)
 60 d1csna_ d.144.1.7 (A:) Casein  100.0 2.8E-42 2.1E-46  362.3  19.8  263  558-864     4-278 (293)
 61 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 1.9E-42 1.4E-46  367.6  11.0  252  558-857    23-291 (322)
 62 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 3.8E-37 2.7E-41  335.4  16.5  278  559-857    13-327 (362)
 63 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 2.6E-31 1.9E-35  282.7  17.0  255  225-481    51-309 (313)
 64 d2omza2 c.10.2.1 (A:33-416) In 100.0 2.9E-29 2.1E-33  275.4  30.9  206  227-450   178-383 (384)
 65 d2omza2 c.10.2.1 (A:33-416) In 100.0 4.8E-29 3.5E-33  273.5  30.4  356   20-426    28-383 (384)
 66 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 1.4E-29 9.9E-34  269.2  14.6  252  200-455    51-307 (313)
 67 d1ozna_ c.10.2.7 (A:) Reticulo  99.9 3.7E-27 2.7E-31  246.4  20.0  253  203-483    15-268 (284)
 68 d1xkua_ c.10.2.7 (A:) Decorin   99.9 2.2E-26 1.6E-30  243.3  24.6  268   15-332    11-284 (305)
 69 d1xkua_ c.10.2.7 (A:) Decorin   99.9 6.7E-26 4.9E-30  239.6  26.2  243  170-429    11-255 (305)
 70 d1ozna_ c.10.2.7 (A:) Reticulo  99.9   2E-26 1.4E-30  240.8  18.9  224  172-405    14-238 (284)
 71 d1p9ag_ c.10.2.7 (G:) von Will  99.9 3.4E-25 2.5E-29  228.6  20.6  206  245-457     7-212 (266)
 72 d1p9ag_ c.10.2.7 (G:) von Will  99.9 8.5E-25 6.2E-29  225.5  20.2  205  270-480     8-212 (266)
 73 d1jl5a_ c.10.2.6 (A:) Leucine   99.9   1E-20 7.6E-25  203.7  31.9  199   15-285    39-237 (353)
 74 d1zara2 d.144.1.9 (A:91-281) R  99.9 3.1E-23 2.2E-27  201.9   7.4  170  561-764     2-189 (191)
 75 d1jl5a_ c.10.2.6 (A:) Leucine   99.9 3.8E-20 2.8E-24  199.2  32.7  221  197-455   118-339 (353)
 76 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.8 6.8E-23   5E-27  229.6  -8.8  109   15-123     3-125 (460)
 77 d1h6ua2 c.10.2.1 (A:36-262) In  99.8 3.6E-19 2.6E-23  178.3  17.1  188  245-448    38-225 (227)
 78 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.8   3E-19 2.2E-23  181.0  15.6  219  202-448    11-233 (242)
 79 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.8   2E-19 1.5E-23  174.7  13.7  177  299-481    11-188 (192)
 80 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.8 1.8E-19 1.3E-23  182.7  13.2  220  171-401    10-234 (242)
 81 d1h6ua2 c.10.2.1 (A:36-262) In  99.8 4.4E-19 3.2E-23  177.6  15.5  204  202-424    22-225 (227)
 82 d1h6ta2 c.10.2.1 (A:31-240) In  99.8 7.5E-19 5.4E-23  173.2  13.7  165  271-449    45-209 (210)
 83 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.8 1.1E-21   8E-26  219.6  -8.3   61   39-99      3-68  (460)
 84 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.8   8E-19 5.8E-23  170.4  12.7  127  252-381    12-139 (192)
 85 d2omxa2 c.10.2.1 (A:37-235) In  99.8 1.1E-18 7.9E-23  170.5  13.1  162  270-445    38-199 (199)
 86 d1h6ta2 c.10.2.1 (A:31-240) In  99.7 3.8E-18 2.8E-22  168.1  14.8  145  268-424    64-208 (210)
 87 d2omxa2 c.10.2.1 (A:37-235) In  99.7 8.6E-18 6.2E-22  164.0  15.6  162  246-421    38-199 (199)
 88 d2astb2 c.10.1.3 (B:2136-2419)  99.6 4.9E-16 3.6E-20  160.4   6.5  221  203-426     4-235 (284)
 89 d1a9na_ c.10.2.4 (A:) Spliceso  99.6 1.7E-15 1.2E-19  141.4   9.1  128  316-446    14-145 (162)
 90 d1dcea3 c.10.2.2 (A:444-567) R  99.6 2.8E-15   2E-19  132.8   9.5  102   17-123     1-103 (124)
 91 d1a9na_ c.10.2.4 (A:) Spliceso  99.6 2.1E-15 1.6E-19  140.6   9.0  127  268-398    14-145 (162)
 92 d1dcea3 c.10.2.2 (A:444-567) R  99.5   8E-15 5.9E-19  129.8  10.9   87  364-453    16-103 (124)
 93 d2astb2 c.10.1.3 (B:2136-2419)  99.5   8E-16 5.8E-20  158.8   4.6  180  199-378    46-235 (284)
 94 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.5 3.2E-16 2.3E-20  167.3  -0.1  187  268-454    89-316 (344)
 95 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.5 2.7E-16   2E-20  167.9  -1.3  251  160-430    22-316 (344)
 96 d2ifga3 c.10.2.7 (A:36-191) Hi  99.4 1.4E-13   1E-17  127.2  10.0  112  344-457     8-120 (156)
 97 d2ifga3 c.10.2.7 (A:36-191) Hi  99.4 2.7E-13   2E-17  125.2  10.5  107  321-429     9-116 (156)
 98 d1m9la_ c.10.3.1 (A:) Outer ar  99.4 3.6E-15 2.6E-19  144.3  -3.9  110  315-429    43-153 (198)
 99 d1m9la_ c.10.3.1 (A:) Outer ar  99.4 4.8E-15 3.5E-19  143.4  -3.4  127   15-148    24-153 (198)
100 d1koha1 c.10.2.3 (A:201-362) m  98.6 1.4E-09   1E-13  100.6  -0.4   87  364-452    61-156 (162)
101 d1j7la_ d.144.1.6 (A:) Type II  98.6 9.7E-08 7.1E-12   96.0  11.1  150  552-720     7-213 (263)
102 d1koha1 c.10.2.3 (A:201-362) m  98.6   3E-09 2.2E-13   98.3  -0.6  104  273-381    23-128 (162)
103 d1nd4a_ d.144.1.6 (A:) Aminogl  97.9 6.4E-06 4.7E-10   81.7   7.9  131  566-720    17-205 (255)
104 d1pgva_ c.10.1.1 (A:) Tropomod  97.8 5.3E-06 3.9E-10   76.2   4.6   88  364-451    40-142 (167)
105 d1pgva_ c.10.1.1 (A:) Tropomod  97.8   4E-06 2.9E-10   77.0   3.3   13  367-379    99-111 (167)
106 d2pula1 d.144.1.6 (A:5-396) Me  97.8 3.7E-05 2.7E-09   81.2  11.2   77  564-647    31-117 (392)
107 d1zyla1 d.144.1.6 (A:4-328) Rd  97.3  0.0004 2.9E-08   70.9  10.6  145  572-720    35-220 (325)
108 d1io0a_ c.10.1.1 (A:) Tropomod  97.2 2.3E-05 1.6E-09   71.9  -0.8   13  438-450   130-142 (166)
109 d1io0a_ c.10.1.1 (A:) Tropomod  97.2   4E-05 2.9E-09   70.1   0.9   11  415-425   131-141 (166)
110 d1nw1a_ d.144.1.8 (A:) Choline  96.7  0.0014   1E-07   68.8   9.0   74  564-648    47-128 (395)
111 d2ppqa1 d.144.1.6 (A:5-320) Ho  96.7  0.0049 3.6E-07   62.3  12.2  168  549-720     3-213 (316)
112 d1cjaa_ d.144.1.3 (A:) Actin-f  25.0      75  0.0054   29.7   7.2  136  569-717    79-234 (342)

No 1  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-50  Score=420.45  Aligned_cols=249  Identities=22%  Similarity=0.320  Sum_probs=209.2

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeE
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL  638 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l  638 (871)
                      ++|++.+.||+|+||+||+|++..+|+.||||+++.......+.+.+|++++++++||||+++++++.+.     +..|+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~~~~i   94 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELWV   94 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEEC-----CEEEE
Confidence            5799999999999999999999999999999999766665677899999999999999999999998776     67899


Q ss_pred             EEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccc
Q 002883          639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS  718 (871)
Q Consensus       639 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  718 (871)
                      |||||+||+|.+++...        .+++.+++.++.||+.||+|||++   ||+||||||+|||++.++.+||+|||+|
T Consensus        95 vmEy~~gg~L~~~~~~~--------~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a  163 (293)
T d1yhwa1          95 VMEYLAGGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC  163 (293)
T ss_dssp             EEECCTTCBHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EEEecCCCcHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhh
Confidence            99999999999988653        489999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc-hhh
Q 002883          719 RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD-QVA  797 (871)
Q Consensus       719 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~-~~~  797 (871)
                      +......   .......||+.|+|||++.+..++.++||||+||++|+|+||+.||.+....... ........+. ...
T Consensus       164 ~~~~~~~---~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~  239 (293)
T d1yhwa1         164 AQITPEQ---SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-YLIATNGTPELQNP  239 (293)
T ss_dssp             EECCSTT---CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHHCSCCCSSG
T ss_pred             eeecccc---ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHH-HHHHhCCCCCCCCc
Confidence            9875432   2234457999999999999999999999999999999999999999754322211 1111111110 000


Q ss_pred             hhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          798 EIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                                                    ..+...+.+++.+||+.||++|||++|+++
T Consensus       240 ------------------------------~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         240 ------------------------------EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             ------------------------------GGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ------------------------------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                          122345778999999999999999999975


No 2  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.1e-51  Score=419.99  Aligned_cols=254  Identities=24%  Similarity=0.326  Sum_probs=205.3

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK  636 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  636 (871)
                      .++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.+.     ...
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~-----~~~   78 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-----NIQ   78 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEET-----TEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccC-----cee
Confidence            357999999999999999999999999999999996543 23346788999999999999999999998776     678


Q ss_pred             eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883          637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG  716 (871)
Q Consensus       637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  716 (871)
                      |+||||+++|+|.+++....       .+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||
T Consensus        79 ~ivmEy~~gg~L~~~l~~~~-------~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG  148 (271)
T d1nvra_          79 YLFLEYCSGGELFDRIEPDI-------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFG  148 (271)
T ss_dssp             EEEEECCTTEEGGGGSBTTT-------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred             EEEEeccCCCcHHHHHhcCC-------CCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccch
Confidence            99999999999999997543       599999999999999999999999   99999999999999999999999999


Q ss_pred             cceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      +|+....... .......+||+.|||||++.+..+ +.++||||+||++|||+||+.||.....................
T Consensus       149 ~a~~~~~~~~-~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~  227 (271)
T d1nvra_         149 LATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN  227 (271)
T ss_dssp             TCEECEETTE-ECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTST
T ss_pred             hheeeccCCc-cccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC
Confidence            9997654321 122344679999999999888776 57899999999999999999999754433222222221111110


Q ss_pred             hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      .                              ...+..++.+++.+||+.||++|||++|+++
T Consensus       228 ~------------------------------~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         228 P------------------------------WKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             T------------------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             c------------------------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0                              0122345678999999999999999999975


No 3  
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.1e-50  Score=418.01  Aligned_cols=261  Identities=26%  Similarity=0.421  Sum_probs=203.9

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF  635 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  635 (871)
                      .++|++.+.||+|+||+||+|++.   ..||||+++..  .....+.+.+|++++++++||||+++++++.+      ..
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~------~~   77 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA------PQ   77 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec------cE
Confidence            468999999999999999999875   35999998643  23445789999999999999999999998643      34


Q ss_pred             eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883          636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF  715 (871)
Q Consensus       636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  715 (871)
                      .++||||+++|+|.+++.....      .+++..+..++.||++||+|||++   +||||||||+|||++.++.+||+||
T Consensus        78 ~~lv~Ey~~~g~L~~~l~~~~~------~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DF  148 (276)
T d1uwha_          78 LAIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDF  148 (276)
T ss_dssp             CEEEEECCCEEEHHHHHHTSCC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCC
T ss_pred             EEEEEecCCCCCHHHHHhhccC------CCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccc
Confidence            7899999999999999976532      589999999999999999999999   9999999999999999999999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL---GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL  792 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~  792 (871)
                      |+|+...... .........||+.|||||++.+   +.|+.++|||||||++|||+||+.||.+................
T Consensus       149 Gla~~~~~~~-~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~  227 (276)
T d1uwha_         149 GLATVKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL  227 (276)
T ss_dssp             CCSCC-------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSC
T ss_pred             cceeeccccC-CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCC
Confidence            9998765432 1222344679999999998753   46899999999999999999999999864332222211111111


Q ss_pred             CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883          793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK  864 (871)
Q Consensus       793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~  864 (871)
                      ++...+                           ....+++++.+++.+||+.||++|||++|+++.|+.+.+
T Consensus       228 ~p~~~~---------------------------~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         228 SPDLSK---------------------------VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             CCCGGG---------------------------SCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCcchh---------------------------ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            111111                           111234567899999999999999999999999998865


No 4  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.9e-50  Score=413.73  Aligned_cols=246  Identities=22%  Similarity=0.340  Sum_probs=206.1

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF  635 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  635 (871)
                      ++|++.+.||+|+||+||+|++..+++.||+|++...   .....+.+.+|++++++++||||+++++++.+.     ..
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-----~~   80 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-----TR   80 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----SE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEEC-----CE
Confidence            5799999999999999999999999999999998643   233457789999999999999999999998765     67


Q ss_pred             eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883          636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF  715 (871)
Q Consensus       636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  715 (871)
                      .|+|||||++|+|.+++....       .+++..+..++.||+.||+|||++   +||||||||+|||++.++.+||+||
T Consensus        81 ~~ivmEy~~~g~L~~~l~~~~-------~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DF  150 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQKLS-------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADF  150 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEEeecCCCcHHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeeccc
Confidence            899999999999999998654       599999999999999999999999   9999999999999999999999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      |+|......     ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..........  .
T Consensus       151 G~a~~~~~~-----~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~--~  222 (263)
T d2j4za1         151 GWSVHAPSS-----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRISRVEF--T  222 (263)
T ss_dssp             CSCSCCCCC-----CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTCC--C
T ss_pred             ceeeecCCC-----cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH-HHHHHHcCCC--C
Confidence            999865432     2234579999999999999999999999999999999999999997543221 1111111110  0


Q ss_pred             hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      ..+                              .+++++.+++.+||+.||++|||++|+++
T Consensus       223 ~p~------------------------------~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         223 FPD------------------------------FVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             CCT------------------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCc------------------------------cCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            000                              12345678999999999999999999986


No 5  
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.5e-49  Score=408.21  Aligned_cols=249  Identities=25%  Similarity=0.372  Sum_probs=200.9

Q ss_pred             CCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeEE
Q 002883          562 SSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV  639 (871)
Q Consensus       562 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv  639 (871)
                      +..+.||+|+||+||+|++..+++.||+|++....  ....+.+.+|++++++++|||||++++++.+. ..+...+|+|
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-~~~~~~~~iv   90 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeec-cccCCEEEEE
Confidence            56678999999999999999999999999986442  33456789999999999999999999998654 3334678999


Q ss_pred             EeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCceeeC-CCCceEEeecc
Q 002883          640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTS--IVHCDLKPSNVLLD-NEMVAHVGDFG  716 (871)
Q Consensus       640 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~-~~~~~kl~Dfg  716 (871)
                      |||+++|+|.+++....       .+++..++.++.||+.||+|||++   +  |+||||||+|||++ .++.+||+|||
T Consensus        91 mE~~~~g~L~~~l~~~~-------~~~~~~~~~~~~qi~~gl~yLH~~---~~~IiHrDiKp~NILl~~~~~~~Kl~DFG  160 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRFK-------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLG  160 (270)
T ss_dssp             EECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred             EeCCCCCcHHHHHhccc-------cccHHHHHHHHHHHHHHHHHHHHC---CCCEEeCCcChhhceeeCCCCCEEEeecC
Confidence            99999999999997654       589999999999999999999998   6  99999999999996 57899999999


Q ss_pred             cceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883          717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQV  796 (871)
Q Consensus       717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~  796 (871)
                      +|+....     .......||+.|+|||++.+ .++.++||||+||++|||++|+.||..................+...
T Consensus       161 la~~~~~-----~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~  234 (270)
T d1t4ha_         161 LATLKRA-----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASF  234 (270)
T ss_dssp             GGGGCCT-----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGG
T ss_pred             cceeccC-----CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCccc
Confidence            9986432     22334679999999998765 69999999999999999999999997543222222222111111111


Q ss_pred             hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      ..                              ...+++.+++.+||+.||++||||+|+++
T Consensus       235 ~~------------------------------~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         235 DK------------------------------VAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             GG------------------------------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             Cc------------------------------cCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            11                              12234678999999999999999999986


No 6  
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-49  Score=414.71  Aligned_cols=252  Identities=23%  Similarity=0.299  Sum_probs=207.0

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeE
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL  638 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l  638 (871)
                      +.|++.+.||+|+||+||+|++..+++.||||+++.......+.+.+|++++++++|||||++++++.+.     +..|+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-----~~~~l   86 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-----NNLWI   86 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEET-----TEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-----CeEEE
Confidence            5689999999999999999999999999999999776666667899999999999999999999998775     67899


Q ss_pred             EEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccc
Q 002883          639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS  718 (871)
Q Consensus       639 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  718 (871)
                      |||||++|+|.+++.....      .+++.++..++.||+.||.|||++   +|+||||||+|||++.++.+||+|||+|
T Consensus        87 vmEy~~~g~L~~~~~~~~~------~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a  157 (288)
T d2jfla1          87 LIEFCAGGAVDAVMLELER------PLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS  157 (288)
T ss_dssp             EEECCTTEEHHHHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEecCCCCcHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhh
Confidence            9999999999999875432      599999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCCCccccccccccccccCcccc-----cCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883          719 RLLHDNSPDQTSTSRVKGSIGYVAPEYG-----ALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP  793 (871)
Q Consensus       719 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~  793 (871)
                      +.....   ........||+.|+|||++     .+..|+.++||||+||++|||+||+.||.+...... +........+
T Consensus       158 ~~~~~~---~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~-~~~i~~~~~~  233 (288)
T d2jfla1         158 AKNTRT---IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV-LLKIAKSEPP  233 (288)
T ss_dssp             EECHHH---HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHHHHHSCCC
T ss_pred             hccCCC---cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHH-HHHHHcCCCC
Confidence            765321   1223346799999999986     355689999999999999999999999976433221 1111111111


Q ss_pred             chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                       ...                            ....++.++.+++.+||+.||++|||++|+++
T Consensus       234 -~~~----------------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         234 -TLA----------------------------QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             -CCS----------------------------SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -CCC----------------------------ccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             000                            00122346779999999999999999999987


No 7  
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.8e-50  Score=413.75  Aligned_cols=258  Identities=22%  Similarity=0.315  Sum_probs=195.8

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK  636 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  636 (871)
                      ++|++.+.||+|+||+||+|++..+|+.||||+++...  ....+.+.+|++++++++||||+++++++.+..   ....
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~---~~~~   80 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT---NTTL   80 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC-------CE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCC---CCEE
Confidence            57999999999999999999999999999999996543  334567889999999999999999999886532   2567


Q ss_pred             eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC--CCCeEecCCCCCceeeCCCCceEEee
Q 002883          637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC--HTSIVHCDLKPSNVLLDNEMVAHVGD  714 (871)
Q Consensus       637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlkp~Nill~~~~~~kl~D  714 (871)
                      |+|||||++|+|.+++......   ...+++..++.++.||+.||+|||++.  ..+|+||||||+|||++.++.+||+|
T Consensus        81 ~ivmEy~~~g~L~~~i~~~~~~---~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~D  157 (269)
T d2java1          81 YIVMEYCEGGDLASVITKGTKE---RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD  157 (269)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECC
T ss_pred             EEEEecCCCCcHHHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEee
Confidence            9999999999999999764321   236999999999999999999999972  11499999999999999999999999


Q ss_pred             cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883          715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD  794 (871)
Q Consensus       715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~  794 (871)
                      ||+|+......   .......||+.|+|||++.+..|++++|||||||++|||+||+.||........ .........+ 
T Consensus       158 FG~a~~~~~~~---~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~-~~~i~~~~~~-  232 (269)
T d2java1         158 FGLARILNHDT---SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-AGKIREGKFR-  232 (269)
T ss_dssp             HHHHHHC--------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHTCCC-
T ss_pred             ccceeecccCC---CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHH-HHHHHcCCCC-
Confidence            99998865432   223346799999999999999999999999999999999999999975432211 1111111111 


Q ss_pred             hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      ...                              ..+++++.+++.+||+.||++|||++|+++
T Consensus       233 ~~~------------------------------~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         233 RIP------------------------------YRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             CCC------------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCC------------------------------cccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            000                              012345779999999999999999999975


No 8  
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=2.9e-49  Score=416.15  Aligned_cols=265  Identities=25%  Similarity=0.406  Sum_probs=200.6

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCc---EEEEEEeecc-ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEET---NVAVKVLDLQ-QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE  634 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  634 (871)
                      ++|++.+.||+|+||+||+|++..+++   .||||++... .....+.+.+|++++++++|||||++++++.+.     +
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----~  100 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKS-----T  100 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----S
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC-----C
Confidence            568888999999999999999976554   5899988543 333456799999999999999999999998765     5


Q ss_pred             eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883          635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD  714 (871)
Q Consensus       635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  714 (871)
                      ..|+|||||++|+|.+++.....      .+++.++..++.||++||+|||++   +|+||||||+|||++.++.+||+|
T Consensus       101 ~~~iv~Ey~~~g~L~~~~~~~~~------~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~D  171 (299)
T d1jpaa_         101 PVMIITEFMENGSLDSFLRQNDG------QFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSD  171 (299)
T ss_dssp             SCEEEEECCTTEEHHHHHHTTTT------CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred             EEEEEEEecCCCcceeeeccccC------CCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECC
Confidence            68999999999999999876542      589999999999999999999999   999999999999999999999999


Q ss_pred             cccceecCCCCCCcc--ccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhC
Q 002883          715 FGLSRLLHDNSPDQT--STSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMG  791 (871)
Q Consensus       715 fg~a~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~  791 (871)
                      ||+|+..........  ......||+.|+|||.+.++.++.++|||||||++|||+| |+.||.+......  .......
T Consensus       172 FGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~--~~~i~~~  249 (299)
T d1jpaa_         172 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV--INAIEQD  249 (299)
T ss_dssp             C-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHHHTT
T ss_pred             cccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHH--HHHHHcC
Confidence            999987764332221  1223457899999999999999999999999999999998 8999986433221  1111111


Q ss_pred             CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHHHhh
Q 002883          792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQAI  869 (871)
Q Consensus       792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~~~~  869 (871)
                      .....                              ..+++.++.+++.+||+.||++|||+.||++.|+++.+.-..+
T Consensus       250 ~~~~~------------------------------~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p~sl  297 (299)
T d1jpaa_         250 YRLPP------------------------------PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSL  297 (299)
T ss_dssp             CCCCC------------------------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGG
T ss_pred             CCCCC------------------------------CccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcChhhC
Confidence            10000                              0123346778999999999999999999999999987654444


No 9  
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=7.1e-50  Score=418.22  Aligned_cols=261  Identities=24%  Similarity=0.376  Sum_probs=212.4

Q ss_pred             HhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883          556 KATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF  635 (871)
Q Consensus       556 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  635 (871)
                      ...++|++.+.||+|+||+||+|++..+++.||||+++.... ..+++.+|++++++++|||||+++++|.+.     +.
T Consensus        14 i~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~~   87 (287)
T d1opja_          14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PP   87 (287)
T ss_dssp             CCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SS
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc-hHHHHHHHHHHHHhCCCCCEecCCccEeeC-----Ce
Confidence            345678899999999999999999998999999999965433 457899999999999999999999998765     56


Q ss_pred             eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883          636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF  715 (871)
Q Consensus       636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  715 (871)
                      .|+||||+++|+|.+++......     .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+||
T Consensus        88 ~~iv~E~~~~g~l~~~l~~~~~~-----~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DF  159 (287)
T d1opja_          88 FYIITEFMTYGNLLDYLRECNRQ-----EVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADF  159 (287)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred             eEEEeecccCcchHHHhhhcccc-----chHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccc
Confidence            89999999999999999765422     689999999999999999999999   9999999999999999999999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      |+|+.....  .........|++.|+|||++.++.|+.++|||||||++|||++|..||........ ............
T Consensus       160 G~a~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~-~~~~i~~~~~~~  236 (287)
T d1opja_         160 GLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRME  236 (287)
T ss_dssp             CCTTTCCSS--SSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHHHHHTTCCCC
T ss_pred             cceeecCCC--CceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHH-HHHHHhcCCCCC
Confidence            999876543  22233345689999999999999999999999999999999997777654322211 111111111111


Q ss_pred             hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHH
Q 002883          796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQ  863 (871)
Q Consensus       796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~  863 (871)
                      ..                              ..++.++.+++.+||+.||++|||++|+++.|+.+.
T Consensus       237 ~~------------------------------~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         237 RP------------------------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             CC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CC------------------------------ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            00                              022346779999999999999999999999998763


No 10 
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.5e-49  Score=406.33  Aligned_cols=256  Identities=26%  Similarity=0.437  Sum_probs=198.0

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeE
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL  638 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l  638 (871)
                      ++|++.+.||+|+||+||+|++. +++.||||+++.... ..+.+.+|++++++++||||++++++|.+.     ...|+
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~-----~~~~l   77 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ-----APICL   77 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SSCEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcC-cHHHHHHHHHHHHhcCCCCcccccceeccC-----CceEE
Confidence            57889999999999999999997 577899999975433 457899999999999999999999998765     56899


Q ss_pred             EEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccc
Q 002883          639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLS  718 (871)
Q Consensus       639 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  718 (871)
                      ||||+++|+|.+++.....      .+++..+..++.|||.||+|||+.   +|+||||||+||+++.++.+||+|||+|
T Consensus        78 v~E~~~~g~L~~~l~~~~~------~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla  148 (263)
T d1sm2a_          78 VFEFMEHGCLSDYLRTQRG------LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT  148 (263)
T ss_dssp             EEECCTTCBHHHHHHTTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC--
T ss_pred             EEEecCCCcHHHHhhcccc------CCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchh
Confidence            9999999999999876532      589999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhC-CCCCchhhhhhhhHHHHhhhCCCchhh
Q 002883          719 RLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG-KRPTDDMFEEGLSLHKYAKMGLPDQVA  797 (871)
Q Consensus       719 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG-~~pf~~~~~~~~~~~~~~~~~~~~~~~  797 (871)
                      +......  ........||+.|+|||++.+..++.++|||||||++|||+|| ++||...... ..... ..........
T Consensus       149 ~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~-~~~~~-i~~~~~~~~p  224 (263)
T d1sm2a_         149 RFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-EVVED-ISTGFRLYKP  224 (263)
T ss_dssp             ------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHH-HHHHH-HHHTCCCCCC
T ss_pred             eeccCCC--ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHH-HHHHH-HHhcCCCCCc
Confidence            8765432  1222335689999999999999999999999999999999995 5555432221 11111 1111110000


Q ss_pred             hhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883          798 EIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK  864 (871)
Q Consensus       798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~  864 (871)
                      +                              .++.++.+++.+||+.||++|||++|+++.|+++.+
T Consensus       225 ~------------------------------~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         225 R------------------------------LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             T------------------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             c------------------------------ccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            0                              123457799999999999999999999999999865


No 11 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-49  Score=412.49  Aligned_cols=250  Identities=20%  Similarity=0.295  Sum_probs=203.9

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF  635 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  635 (871)
                      ++|++.+.||+|+||+||+|++..+++.||||+++..   .....+.+.+|++++++++||||+++++++.+.     ..
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-----~~   82 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD-----EK   82 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECS-----SE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEEC-----CE
Confidence            5799999999999999999999989999999999643   233456789999999999999999999998765     67


Q ss_pred             eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883          636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF  715 (871)
Q Consensus       636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  715 (871)
                      .|+||||+++|+|.+++...+       .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+||
T Consensus        83 ~~ivmEy~~gg~L~~~~~~~~-------~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DF  152 (288)
T d1uu3a_          83 LYFGLSYAKNGELLKYIRKIG-------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDF  152 (288)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred             EEEEEEccCCCCHHHhhhccC-------CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEeccc
Confidence            899999999999999988754       699999999999999999999999   9999999999999999999999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      |+|+.+..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..........  .
T Consensus       153 G~a~~~~~~~~-~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~-~~~~i~~~~~--~  228 (288)
T d1uu3a_         153 GTAKVLSPESK-QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEY--D  228 (288)
T ss_dssp             TTCEECC-----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHTTCC--C
T ss_pred             ccceecccCCc-ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHH-HHHHHHcCCC--C
Confidence            99998754321 222334579999999999999999999999999999999999999997542221 1111111110  0


Q ss_pred             hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      ..+                              .+.+++.+++.+||+.||++|||++|+++
T Consensus       229 ~p~------------------------------~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         229 FPE------------------------------KFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             CCT------------------------------TCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             CCc------------------------------cCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            000                              12345679999999999999999999754


No 12 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.1e-49  Score=419.08  Aligned_cols=200  Identities=26%  Similarity=0.362  Sum_probs=178.3

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK  636 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  636 (871)
                      .++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|+.++++++|||||+++++|.+.     ...
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~~   79 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI   79 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECS-----SEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----CEE
Confidence            468999999999999999999999999999999996543 33456789999999999999999999999876     678


Q ss_pred             eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883          637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH-HCHTSIVHCDLKPSNVLLDNEMVAHVGDF  715 (871)
Q Consensus       637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  715 (871)
                      |+||||+++|+|.+++.+.+       .+++..++.++.|++.||.|||+ +   +|+||||||+|||++.++.+||+||
T Consensus        80 ~iVmEy~~gg~L~~~l~~~~-------~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~NILl~~~~~vkl~DF  149 (322)
T d1s9ja_          80 SICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDF  149 (322)
T ss_dssp             EEEEECCTTEEHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCC
T ss_pred             EEEEEcCCCCcHHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHHHeeECCCCCEEEeeC
Confidence            99999999999999997654       58999999999999999999996 5   8999999999999999999999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchh
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDM  777 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  777 (871)
                      |+|+...+.     .....+||+.|+|||++.+..|++++||||+||++|||++|+.||...
T Consensus       150 Gla~~~~~~-----~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~  206 (322)
T d1s9ja_         150 GVSGQLIDS-----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  206 (322)
T ss_dssp             CCCHHHHHH-----TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred             CCccccCCC-----ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            999876432     223457999999999999999999999999999999999999999754


No 13 
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-48  Score=406.18  Aligned_cols=258  Identities=26%  Similarity=0.437  Sum_probs=207.0

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA  637 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  637 (871)
                      .++|++.+.||+|+||+||+|++. +++.||||+++.... ..+.+.+|++++++++|||||++++++.+      +..|
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~~~g~~~~------~~~~   83 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ------EPIY   83 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcC-CHHHHHHHHHHHHhCCCCCEeEEEeeecc------CCeE
Confidence            467899999999999999999986 678899999975433 45789999999999999999999998753      3468


Q ss_pred             EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883          638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL  717 (871)
Q Consensus       638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  717 (871)
                      +||||+++|+|.+++......     .+++..+..++.||++||+|||++   +|+||||||+|||+++++.+||+|||+
T Consensus        84 iv~Ey~~~g~L~~~~~~~~~~-----~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGl  155 (272)
T d1qpca_          84 IITEYMENGSLVDFLKTPSGI-----KLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGL  155 (272)
T ss_dssp             EEEECCTTCBHHHHTTSHHHH-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEEeCCCCcHHHHHhhcCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccc
Confidence            999999999999988765432     589999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchhh
Q 002883          718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVA  797 (871)
Q Consensus       718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~  797 (871)
                      |+......  ........||+.|+|||++.++.++.++|||||||++|||+||..|+............... .......
T Consensus       156 a~~~~~~~--~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~-~~~~~~p  232 (272)
T d1qpca_         156 ARLIEDNE--YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRP  232 (272)
T ss_dssp             CEECSSSC--EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCC
T ss_pred             eEEccCCc--cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCCCCc
Confidence            99875432  22233456899999999999899999999999999999999966555432222111111111 1100000


Q ss_pred             hhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883          798 EIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK  864 (871)
Q Consensus       798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~  864 (871)
                                                    ..+++++.+++.+||+.||++|||++|+++.|+++-.
T Consensus       233 ------------------------------~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         233 ------------------------------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             ------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ------------------------------ccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence                                          0223457799999999999999999999999987643


No 14 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=8.7e-49  Score=413.31  Aligned_cols=252  Identities=25%  Similarity=0.317  Sum_probs=191.0

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK  636 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  636 (871)
                      .++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.     +..
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~~   82 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG-----GHL   82 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECS-----SEE
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----CEE
Confidence            356999999999999999999999999999999996443 22345678999999999999999999998765     678


Q ss_pred             eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC---CCCceEEe
Q 002883          637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD---NEMVAHVG  713 (871)
Q Consensus       637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~  713 (871)
                      |+|||||+||+|.+++....       .+++.++..++.||+.||+|||++   +|+||||||+||++.   .++.+||+
T Consensus        83 ~lvmE~~~gg~L~~~l~~~~-------~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~  152 (307)
T d1a06a_          83 YLIMQLVSGGELFDRIVEKG-------FYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMIS  152 (307)
T ss_dssp             EEEECCCCSCBHHHHHHTCS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEEC
T ss_pred             EEEEeccCCCcHHHhhhccc-------CCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEe
Confidence            99999999999999997643       599999999999999999999999   999999999999994   57899999


Q ss_pred             ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883          714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP  793 (871)
Q Consensus       714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~  793 (871)
                      |||+|+......    .....+||+.|+|||++.+..|++++||||+||++|||++|+.||.+...... .........+
T Consensus       153 DFG~a~~~~~~~----~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~-~~~i~~~~~~  227 (307)
T d1a06a_         153 DFGLSKMEDPGS----VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL-FEQILKAEYE  227 (307)
T ss_dssp             CC----------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHTTCCC
T ss_pred             ccceeEEccCCC----eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHH-HHHHhccCCC
Confidence            999998765332    22345799999999999999999999999999999999999999976433221 1111111110


Q ss_pred             chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      ...                            +....+++++.+++.+||+.||++|||++|+++
T Consensus       228 ~~~----------------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         228 FDS----------------------------PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             CCT----------------------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCC----------------------------ccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            000                            001123346779999999999999999999987


No 15 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-48  Score=405.97  Aligned_cols=259  Identities=24%  Similarity=0.387  Sum_probs=208.1

Q ss_pred             cCCCCCce-eeccccceEEEEEECC--CCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883          559 EGFSSANL-IGIGGYGYVYKGILGT--EETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE  634 (871)
Q Consensus       559 ~~y~~~~~-lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  634 (871)
                      ++|.+.+. ||+|+||+||+|.+..  ++..||||+++... ....+.+.+|++++++++|||||++++++.+      +
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------~   81 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------E   81 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES------S
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc------C
Confidence            45666674 9999999999998753  45579999996443 3345789999999999999999999999854      2


Q ss_pred             eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883          635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD  714 (871)
Q Consensus       635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  714 (871)
                      ..|+||||+++|+|.+++.....      .+++..+..++.||+.||+|||++   +|+||||||+||+++.++.+||+|
T Consensus        82 ~~~lvmE~~~~g~L~~~l~~~~~------~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~D  152 (285)
T d1u59a_          82 ALMLVMEMAGGGPLHKFLVGKRE------EIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISD  152 (285)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCTT------TSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECC
T ss_pred             eEEEEEEeCCCCcHHHHhhcccc------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeecc
Confidence            37899999999999999865432      589999999999999999999999   999999999999999999999999


Q ss_pred             cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCC
Q 002883          715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLP  793 (871)
Q Consensus       715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~  793 (871)
                      ||+|+................||+.|+|||++.++.++.++|||||||++|||+| |+.||.+.....  .......+..
T Consensus       153 FGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~--~~~~i~~~~~  230 (285)
T d1u59a_         153 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQGKR  230 (285)
T ss_dssp             CTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHHHTTCC
T ss_pred             chhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC
Confidence            9999987654433333444568999999999998999999999999999999998 999998643221  1111111111


Q ss_pred             chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883          794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK  864 (871)
Q Consensus       794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~  864 (871)
                      ....                              ..++.++.+++.+||+.||++|||+.+|.+.|+.+..
T Consensus       231 ~~~p------------------------------~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         231 MECP------------------------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             CCCC------------------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCC------------------------------CcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            1000                              0223467799999999999999999999999998754


No 16 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=3.2e-48  Score=416.11  Aligned_cols=253  Identities=22%  Similarity=0.307  Sum_probs=209.2

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA  637 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  637 (871)
                      .++|++.+.||+|+||+||+|++..+|+.||||++........+.+.+|++++++++|||||++++++.+.     +..|
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~~~~   99 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD-----NEMV   99 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEET-----TEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----CEEE
Confidence            35899999999999999999999999999999999766655667889999999999999999999998775     6789


Q ss_pred             EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC--CCCceEEeec
Q 002883          638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD--NEMVAHVGDF  715 (871)
Q Consensus       638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~--~~~~~kl~Df  715 (871)
                      +|||||+||+|.+++.....      .+++..+..++.||+.||+|||++   +||||||||+|||++  .++.+||+||
T Consensus       100 ivmE~~~gg~L~~~l~~~~~------~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DF  170 (350)
T d1koaa2         100 MIYEFMSGGELFEKVADEHN------KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDF  170 (350)
T ss_dssp             EEECCCCSCBHHHHHTCTTS------CBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCC
T ss_pred             EEEEcCCCCCHHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeec
Confidence            99999999999999965432      599999999999999999999999   999999999999995  4678999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      |+|+.+...    .......||+.|||||++.+..++.++||||+||++|+|++|+.||....... .+...........
T Consensus       171 G~a~~~~~~----~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~~  245 (350)
T d1koaa2         171 GLTAHLDPK----QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-TLRNVKSCDWNMD  245 (350)
T ss_dssp             TTCEECCTT----SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCSC
T ss_pred             chheecccc----cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCC
Confidence            999887543    22334679999999999999999999999999999999999999997543221 1222211111000


Q ss_pred             hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                           .                       .....+.+++.+++.+||+.||++|||++|+++
T Consensus       246 -----~-----------------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         246 -----D-----------------------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             -----C-----------------------GGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -----c-----------------------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 0                       001123345779999999999999999999987


No 17 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.9e-48  Score=403.74  Aligned_cols=263  Identities=26%  Similarity=0.414  Sum_probs=200.4

Q ss_pred             cCCCCCceeeccccceEEEEEECCCC----cEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEE----TNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN  633 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  633 (871)
                      ..|+..++||+|+||+||+|.+..++    ..||||+++... ......+.+|++++++++|||||++++++.+.     
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~-----   81 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY-----   81 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecC-----
Confidence            46888999999999999999986544    479999996443 23345789999999999999999999998765     


Q ss_pred             ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883          634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG  713 (871)
Q Consensus       634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~  713 (871)
                      ...++||||+.++++.+++.....      .+++.++..++.||+.|++|||+.   +|+||||||+|||++.++.+||+
T Consensus        82 ~~~~~v~e~~~~~~l~~~~~~~~~------~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~  152 (283)
T d1mqba_          82 KPMMIITEYMENGALDKFLREKDG------EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVS  152 (283)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHTTT------CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEEC
T ss_pred             CceEEEEEecccCcchhhhhcccc------cccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEc
Confidence            568999999999999998876542      599999999999999999999999   99999999999999999999999


Q ss_pred             ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCC
Q 002883          714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLP  793 (871)
Q Consensus       714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~  793 (871)
                      |||+|+................||+.|+|||++.++.++.++|||||||++|||++|..|+........... .......
T Consensus       153 DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~-~i~~~~~  231 (283)
T d1mqba_         153 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK-AINDGFR  231 (283)
T ss_dssp             CCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-HHHTTCC
T ss_pred             ccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHH-HHhccCC
Confidence            999998876543333333445689999999999999999999999999999999997666543222211111 1111111


Q ss_pred             chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883          794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR  866 (871)
Q Consensus       794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~  866 (871)
                      ....                              ..++.++.+++.+||+.||++|||+.||++.|+++.+.-
T Consensus       232 ~~~~------------------------------~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p  274 (283)
T d1mqba_         232 LPTP------------------------------MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  274 (283)
T ss_dssp             CCCC------------------------------TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             CCCc------------------------------hhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCc
Confidence            0000                              022345779999999999999999999999999887643


No 18 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.5e-48  Score=396.22  Aligned_cols=254  Identities=25%  Similarity=0.424  Sum_probs=210.0

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA  637 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  637 (871)
                      .++|++.+.||+|+||+||+|+++ +++.||||+++.... ..+.+.+|+.++++++||||++++++|.+.     ...+
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~-----~~~~   75 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ-----RPIF   75 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCS-----SSEE
T ss_pred             hHHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeC-----CceE
Confidence            368999999999999999999996 788999999976543 457899999999999999999999998765     5689


Q ss_pred             EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883          638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL  717 (871)
Q Consensus       638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  717 (871)
                      +||||+++|++.+++.....      .+++..+.+++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+
T Consensus        76 iv~Ey~~~g~l~~~~~~~~~------~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~  146 (258)
T d1k2pa_          76 IITEYMANGCLLNYLREMRH------RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGL  146 (258)
T ss_dssp             EEEECCTTEEHHHHHHSGGG------CCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSS
T ss_pred             EEEEccCCCcHHHhhhcccc------CCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchh
Confidence            99999999999999866543      589999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883          718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQV  796 (871)
Q Consensus       718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~  796 (871)
                      |+......  ........||+.|+|||.+.+..++.++|||||||++|||+| |+.||.........  ...........
T Consensus       147 a~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~--~~i~~~~~~~~  222 (258)
T d1k2pa_         147 SRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRLYR  222 (258)
T ss_dssp             CCBCSSSS--CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH--HHHHTTCCCCC
T ss_pred             heeccCCC--ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHH--HHHHhCCCCCC
Confidence            98765432  222334568999999999999999999999999999999998 89999865433221  11111111110


Q ss_pred             hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHH
Q 002883          797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQE  861 (871)
Q Consensus       797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~  861 (871)
                      .+                              ..++++.+++.+||+.||++|||++|+++.|.+
T Consensus       223 p~------------------------------~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         223 PH------------------------------LASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             CT------------------------------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             cc------------------------------cccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            00                              123467799999999999999999999999864


No 19 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=5.1e-48  Score=414.84  Aligned_cols=251  Identities=18%  Similarity=0.279  Sum_probs=209.4

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA  637 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  637 (871)
                      .++|++.+.||+|+||+||+|++..+++.||||+++.......+.+.+|++++++++||||+++++++.+.     ...|
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~-----~~~~  102 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK-----YEMV  102 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS-----SEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----CEEE
Confidence            35799999999999999999999999999999999766655567888999999999999999999998765     6789


Q ss_pred             EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC--CCCceEEeec
Q 002883          638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD--NEMVAHVGDF  715 (871)
Q Consensus       638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~--~~~~~kl~Df  715 (871)
                      +|||||+||+|.+++.....      .+++.+++.++.||+.||+|||+.   ||+||||||+|||++  .++.+||+||
T Consensus       103 ivmE~~~gg~L~~~~~~~~~------~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DF  173 (352)
T d1koba_         103 LILEFLSGGELFDRIAAEDY------KMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDF  173 (352)
T ss_dssp             EEEECCCCCBHHHHTTCTTC------CBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCC
T ss_pred             EEEEcCCCChHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeec
Confidence            99999999999998866432      599999999999999999999999   999999999999997  6789999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC--C
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL--P  793 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~--~  793 (871)
                      |+|..+....    ......||+.|+|||++.+..++.++||||+||++|+|+||+.||.+...... +........  +
T Consensus       174 Gla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~~i~~~~~~~~  248 (352)
T d1koba_         174 GLATKLNPDE----IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET-LQNVKRCDWEFD  248 (352)
T ss_dssp             TTCEECCTTS----CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHHCCCCCC
T ss_pred             ccceecCCCC----ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCC
Confidence            9999876432    23345799999999999999999999999999999999999999975433221 111111111  1


Q ss_pred             chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      ....                              ..++.++.+++.+||+.||++|||++|+++
T Consensus       249 ~~~~------------------------------~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         249 EDAF------------------------------SSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             SSTT------------------------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cccc------------------------------cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1110                              123345679999999999999999999986


No 20 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=4.1e-48  Score=404.45  Aligned_cols=265  Identities=21%  Similarity=0.356  Sum_probs=206.9

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF  635 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  635 (871)
                      ++|++.+.||+|+||+||+|++..+++.||||+++...   ....+.+.+|+++++.++||||+++++++... ......
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~-~~~~~~   85 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE-TPAGPL   85 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-CSSSEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeec-cCCCce
Confidence            67999999999999999999999999999999996432   23346789999999999999999999998765 233356


Q ss_pred             eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883          636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF  715 (871)
Q Consensus       636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  715 (871)
                      .|+||||++|++|.+++...+       .+++.+++.++.||+.||+|||++   +|+||||||+||+++.++..+++||
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~-------~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~  155 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEG-------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF  155 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCC
T ss_pred             EEEEEECCCCCEehhhhcccC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehh
Confidence            899999999999999987654       589999999999999999999999   9999999999999999999999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      |.+.................||+.|+|||++.+..+++++||||+||++|||+||+.||..................+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~  235 (277)
T d1o6ya_         156 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS  235 (277)
T ss_dssp             TTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGG
T ss_pred             hhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCc
Confidence            99987655443334445567999999999999999999999999999999999999999854332221111111111100


Q ss_pred             hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-CHHHHHHHHHHHH
Q 002883          796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-KIQDAIMELQEAQ  863 (871)
Q Consensus       796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-ta~evl~~L~~i~  863 (871)
                                                   .....+++++.+++.+||+.||++|| ||+|+++.|.++.
T Consensus       236 -----------------------------~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         236 -----------------------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             -----------------------------GTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             -----------------------------hhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence                                         00112345677999999999999999 8999999988765


No 21 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.9e-48  Score=400.84  Aligned_cols=252  Identities=25%  Similarity=0.368  Sum_probs=200.8

Q ss_pred             ceeeccccceEEEEEEC--CCCcEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeEEE
Q 002883          565 NLIGIGGYGYVYKGILG--TEETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALVY  640 (871)
Q Consensus       565 ~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~  640 (871)
                      +.||+|+||+||+|.+.  .+++.||||+++..  .....+.+.+|++++++++|||||+++++|..      +..++||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~------~~~~lvm   86 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVM   86 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES------SSEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc------CCEEEEE
Confidence            57999999999999864  34578999999543  23345689999999999999999999999853      2368999


Q ss_pred             eccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883          641 EFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL  720 (871)
Q Consensus       641 e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  720 (871)
                      ||+++|+|.+++....       .+++.++..++.||+.||+|||+.   +|+||||||+||+++.++.+||+|||+|+.
T Consensus        87 E~~~~g~L~~~l~~~~-------~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~  156 (277)
T d1xbba_          87 EMAELGPLNKYLQQNR-------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA  156 (277)
T ss_dssp             ECCTTEEHHHHHHHCT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EcCCCCcHHHHHhhcc-------CCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhh
Confidence            9999999999997654       599999999999999999999999   999999999999999999999999999998


Q ss_pred             cCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCchhhhh
Q 002883          721 LHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQVAEI  799 (871)
Q Consensus       721 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  799 (871)
                      ...............||+.|+|||.+.+..++.++|||||||++|||+| |+.||.+.....  .......+.+....  
T Consensus       157 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~--~~~~i~~~~~~~~p--  232 (277)
T d1xbba_         157 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERMGCP--  232 (277)
T ss_dssp             CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCCCCCC--
T ss_pred             ccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH--HHHHHHcCCCCCCC--
Confidence            7654333333444678999999999999999999999999999999998 899998643321  11111111110000  


Q ss_pred             cChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883          800 IDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK  864 (871)
Q Consensus       800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~  864 (871)
                                                  ..++.++.+++.+||+.||++|||++||.+.|+....
T Consensus       233 ----------------------------~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         233 ----------------------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             ----------------------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             ----------------------------cccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence                                        0223467789999999999999999999999887643


No 22 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-47  Score=402.71  Aligned_cols=251  Identities=21%  Similarity=0.301  Sum_probs=206.6

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCC
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ------RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRG  632 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  632 (871)
                      ++|++.+.||+|+||+||+|++..+|+.||||+++...      ....+.+.+|++++++++|||||++++++.+.    
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~----   85 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK----   85 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----
Confidence            57999999999999999999999999999999985432      12357899999999999999999999998776    


Q ss_pred             CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC----
Q 002883          633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM----  708 (871)
Q Consensus       633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~----  708 (871)
                       ...|+|||||++|+|.+++....       .+++..++.++.|++.||+|||+.   +|+||||||+||+++.++    
T Consensus        86 -~~~~iv~E~~~gg~L~~~i~~~~-------~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~  154 (293)
T d1jksa_          86 -TDVILILELVAGGELFDFLAEKE-------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKP  154 (293)
T ss_dssp             -SEEEEEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSC
T ss_pred             -CEEEEEEEcCCCccccchhcccc-------ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCccc
Confidence             67899999999999999997654       599999999999999999999999   999999999999998776    


Q ss_pred             ceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHh
Q 002883          709 VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYA  788 (871)
Q Consensus       709 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~  788 (871)
                      .+|++|||+|.......    ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+...... .....
T Consensus       155 ~vkl~DfG~a~~~~~~~----~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~-~~~i~  229 (293)
T d1jksa_         155 RIKIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANVS  229 (293)
T ss_dssp             CEEECCCTTCEECTTSC----BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHH
T ss_pred             ceEecchhhhhhcCCCc----cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHH-HHHHH
Confidence            49999999998875432    22345689999999999999999999999999999999999999985432221 11111


Q ss_pred             hhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          789 KMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      .......                            ......++..+.+++.+||+.||++|||++|+++
T Consensus       230 ~~~~~~~----------------------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         230 AVNYEFE----------------------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             TTCCCCC----------------------------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hcCCCCC----------------------------chhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1111000                            0111133456779999999999999999999986


No 23 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=4.3e-48  Score=408.01  Aligned_cols=246  Identities=23%  Similarity=0.303  Sum_probs=201.4

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc---chHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR---GASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF  635 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  635 (871)
                      +.|+..+.||+|+||+||+|++..+++.||||+++....   ...+.+.+|++++++++|||||++++++.+.     ..
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~-----~~   89 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-----HT   89 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEEC-----CE
Confidence            359999999999999999999999999999999965432   2345788999999999999999999998765     67


Q ss_pred             eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883          636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF  715 (871)
Q Consensus       636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  715 (871)
                      .|+|||||++|++..++....       .+++.+++.++.||+.||.|||++   +||||||||+|||++.++.+||+||
T Consensus        90 ~~iv~E~~~~g~l~~~~~~~~-------~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DF  159 (309)
T d1u5ra_          90 AWLVMEYCLGSASDLLEVHKK-------PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDF  159 (309)
T ss_dssp             EEEEEECCSEEHHHHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCC
T ss_pred             EEEEEEecCCCchHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeec
Confidence            899999999999987765543       599999999999999999999999   9999999999999999999999999


Q ss_pred             ccceecCCCCCCccccccccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA---LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL  792 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~  792 (871)
                      |+|.....       .....||+.|+|||++.   .+.|+.++|||||||++|||++|+.||.+...... .........
T Consensus       160 G~a~~~~~-------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~-~~~i~~~~~  231 (309)
T d1u5ra_         160 GSASIMAP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNES  231 (309)
T ss_dssp             TTCBSSSS-------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSCC
T ss_pred             ccccccCC-------CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCC
Confidence            99986542       22356999999999875   35689999999999999999999999975432221 111111111


Q ss_pred             CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      +.....                              .+++.+.+++.+||+.||++||||+|+++
T Consensus       232 ~~~~~~------------------------------~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         232 PALQSG------------------------------HWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             CCCSCT------------------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCC------------------------------CCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            111000                              12345779999999999999999999976


No 24 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-47  Score=407.70  Aligned_cols=263  Identities=24%  Similarity=0.366  Sum_probs=205.9

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCC-----cEEEEEEeecc-ccchHHHHHHHHHHHHcC-CCCccceeeeeecccCc
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEE-----TNVAVKVLDLQ-QRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDT  630 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~  630 (871)
                      .++|++.+.||+|+||+||+|++...+     ..||+|++... .......+.+|+.++.++ +|||||++++++.+.  
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~--  113 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS--  113 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeC--
Confidence            467999999999999999999986544     36999998533 333456789999999998 899999999998765  


Q ss_pred             CCCceeeEEEeccCCCCHHHHhhcccccc----------------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 002883          631 RGNEFKALVYEFMPNGSLENWLNQKEDEQ----------------NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVH  694 (871)
Q Consensus       631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH  694 (871)
                         +..|+|||||++|+|.++++......                .....+++..++.++.||+.||+|||++   +|||
T Consensus       114 ---~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiH  187 (325)
T d1rjba_         114 ---GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVH  187 (325)
T ss_dssp             ---SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred             ---CeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---Ceee
Confidence               66899999999999999997654211                0123589999999999999999999999   9999


Q ss_pred             cCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCC
Q 002883          695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRP  773 (871)
Q Consensus       695 ~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~p  773 (871)
                      |||||+||+++.++.+||+|||+|+...... .........||+.|||||++.++.+++++|||||||++|||+| |+.|
T Consensus       188 RDlKp~Nill~~~~~~Kl~DFGla~~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~P  266 (325)
T d1rjba_         188 RDLAARNVLVTHGKVVKICDFGLARDIMSDS-NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP  266 (325)
T ss_dssp             TTCSGGGEEEETTTEEEECCCGGGSCGGGCT-TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             ccCchhccccccCCeEEEeeccccccccCCC-ceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCC
Confidence            9999999999999999999999998765433 2222334568999999999999999999999999999999998 8999


Q ss_pred             CchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHH
Q 002883          774 TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQ  853 (871)
Q Consensus       774 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~  853 (871)
                      |.+..... .+..............                              .+++++.+++.+||+.||++|||++
T Consensus       267 f~~~~~~~-~~~~~~~~~~~~~~p~------------------------------~~~~~l~~li~~cl~~dP~~RPt~~  315 (325)
T d1rjba_         267 YPGIPVDA-NFYKLIQNGFKMDQPF------------------------------YATEEIYIIMQSCWAFDSRKRPSFP  315 (325)
T ss_dssp             STTCCCSH-HHHHHHHTTCCCCCCT------------------------------TCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCCCHHH-HHHHHHhcCCCCCCCC------------------------------cCCHHHHHHHHHHcCCChhHCcCHH
Confidence            97543222 1222222111111000                              1234677999999999999999999


Q ss_pred             HHHHHHH
Q 002883          854 DAIMELQ  860 (871)
Q Consensus       854 evl~~L~  860 (871)
                      ||++.|.
T Consensus       316 ei~~~L~  322 (325)
T d1rjba_         316 NLTSFLG  322 (325)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999985


No 25 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.2e-47  Score=403.36  Aligned_cols=249  Identities=20%  Similarity=0.284  Sum_probs=207.2

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE  634 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  634 (871)
                      .++|++++.||+|+||.||+|++..+++.||||+++..   .....+.+.+|+.++++++||||+++++++.+.     .
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-----~   78 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-----D   78 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS-----S
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccc-----c
Confidence            46799999999999999999999999999999999643   233457788999999999999999999999876     7


Q ss_pred             eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883          635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD  714 (871)
Q Consensus       635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  714 (871)
                      ..|+|||||+||+|.+++...+       .+++..++.++.||+.||+|||++   +|+||||||+|||++.+|.+||+|
T Consensus        79 ~~~iv~ey~~gg~L~~~~~~~~-------~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~D  148 (337)
T d1o6la_          79 RLCFVMEYANGGELFFHLSRER-------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITD  148 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred             ccccceeccCCCchhhhhhccc-------CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEee
Confidence            7999999999999999998755       589999999999999999999999   999999999999999999999999


Q ss_pred             cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883          715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD  794 (871)
Q Consensus       715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~  794 (871)
                      ||+|+......   ......+||+.|+|||++.+..|+.++||||+||++|||++|++||........ .........+ 
T Consensus       149 FG~a~~~~~~~---~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~-~~~i~~~~~~-  223 (337)
T d1o6la_         149 FGLCKEGISDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-FELILMEEIR-  223 (337)
T ss_dssp             CTTCBCSCCTT---CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCC-
T ss_pred             cccccccccCC---cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHH-HHHHhcCCCC-
Confidence            99998754322   223446799999999999999999999999999999999999999986433221 1111111100 


Q ss_pred             hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCC-----HHHHHH
Q 002883          795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMK-----IQDAIM  857 (871)
Q Consensus       795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----a~evl~  857 (871)
                       ...                              .+..++.+++.+||+.||++||+     ++|+++
T Consensus       224 -~p~------------------------------~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         224 -FPR------------------------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             -CCT------------------------------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -CCc------------------------------cCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence             000                              12345678999999999999995     788876


No 26 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.7e-46  Score=397.49  Aligned_cols=246  Identities=23%  Similarity=0.293  Sum_probs=205.1

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCc
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNE  634 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  634 (871)
                      .++|++.+.||+|+||+||+|++..+|+.||||+++..   .....+.+.+|+.++++++||||+++++++.+.     .
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~   77 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA-----Q   77 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS-----S
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeC-----C
Confidence            35799999999999999999999999999999999643   223457889999999999999999999998765     7


Q ss_pred             eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883          635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD  714 (871)
Q Consensus       635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  714 (871)
                      ..|+||||++||++..++....       .+++..++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|
T Consensus        78 ~~~ivmE~~~gg~l~~~~~~~~-------~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~D  147 (316)
T d1fota_          78 QIFMIMDYIEGGELFSLLRKSQ-------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITD  147 (316)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTS-------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECC
T ss_pred             eeeeEeeecCCccccccccccc-------cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEec
Confidence            7899999999999999998754       588999999999999999999999   999999999999999999999999


Q ss_pred             cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883          715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD  794 (871)
Q Consensus       715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~  794 (871)
                      ||+|+.....      .....||+.|+|||++.+..|+.++||||+||++|||+||+.||........ .........+ 
T Consensus       148 FG~a~~~~~~------~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~~~-  219 (316)
T d1fota_         148 FGFAKYVPDV------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-YEKILNAELR-  219 (316)
T ss_dssp             CSSCEECSSC------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHCCCC-
T ss_pred             CccceEeccc------cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH-HHHHHcCCCC-
Confidence            9999886532      2235799999999999999999999999999999999999999975432211 1111111100 


Q ss_pred             hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-----CHHHHHH
Q 002883          795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-----KIQDAIM  857 (871)
Q Consensus       795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----ta~evl~  857 (871)
                       .                       ++       ...+++.+++.+||+.||++||     |++|+++
T Consensus       220 -~-----------------------p~-------~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         220 -F-----------------------PP-------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             -C-----------------------CT-------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             -C-----------------------CC-------CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence             0                       00       1224567899999999999996     8999976


No 27 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-46  Score=398.96  Aligned_cols=252  Identities=22%  Similarity=0.316  Sum_probs=206.9

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA  637 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  637 (871)
                      .++|++.+.||+|+||+||+|++..+++.||||+++.... ....+.+|+++++.++||||+++++++.+.     ...|
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~-----~~~~   77 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESM-----EELV   77 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEET-----TEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-----CEEE
Confidence            3689999999999999999999999999999999976543 345688999999999999999999998765     6799


Q ss_pred             EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC--CceEEeec
Q 002883          638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE--MVAHVGDF  715 (871)
Q Consensus       638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~--~~~kl~Df  715 (871)
                      +|||||+||+|.+++.....      .+++.+++.++.||+.||+|||+.   +|+||||||+|||++.+  ..+||+||
T Consensus        78 lvmE~~~gg~L~~~i~~~~~------~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DF  148 (321)
T d1tkia_          78 MIFEFISGLDIFERINTSAF------ELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEF  148 (321)
T ss_dssp             EEECCCCCCBHHHHHTSSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred             EEEecCCCCcHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEccc
Confidence            99999999999999976532      489999999999999999999999   99999999999999854  58999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      |.++.....    .......+|+.|+|||...+..++.++||||+||++|+|++|+.||........ +.......... 
T Consensus       149 G~~~~~~~~----~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~-~~~i~~~~~~~-  222 (321)
T d1tkia_         149 GQARQLKPG----DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI-IENIMNAEYTF-  222 (321)
T ss_dssp             TTCEECCTT----CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCCCC-
T ss_pred             chhhccccC----CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCC-
Confidence            999876432    223345689999999999999999999999999999999999999986433221 11111111000 


Q ss_pred             hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                                                 ....+..+..++.+++.+||..||++|||++|+++
T Consensus       223 ---------------------------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         223 ---------------------------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             ---------------------------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---------------------------ChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                       00111233456789999999999999999999987


No 28 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.4e-47  Score=394.23  Aligned_cols=261  Identities=23%  Similarity=0.358  Sum_probs=199.6

Q ss_pred             hcCCCCCceeeccccceEEEEEECCC---CcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTE---ETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN  633 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  633 (871)
                      .++|++.+.||+|+||+||+|++..+   +..||||+++... ....+.+.+|++++++++||||+++++++.+      
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~------   79 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------   79 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------
Confidence            45799999999999999999998643   3568999885433 3345678999999999999999999999853      


Q ss_pred             ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883          634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG  713 (871)
Q Consensus       634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~  713 (871)
                      +..|+||||+++|++.+++.....      .+++..++.++.||++||.|||+.   +|+||||||+||+++.++.+||+
T Consensus        80 ~~~~iv~E~~~~g~l~~~~~~~~~------~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~  150 (273)
T d1mp8a_          80 NPVWIIMELCTLGELRSFLQVRKY------SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG  150 (273)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTT------TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred             CeEEEEEEeccCCcHHhhhhccCC------CCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEc
Confidence            457999999999999998866432      589999999999999999999999   99999999999999999999999


Q ss_pred             ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCC
Q 002883          714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL  792 (871)
Q Consensus       714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~  792 (871)
                      |||+|+......  ........||+.|+|||++.++.++.++|||||||++|||+| |.+||........  ........
T Consensus       151 DfG~a~~~~~~~--~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~--~~~i~~~~  226 (273)
T d1mp8a_         151 DFGLSRYMEDST--YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRIENGE  226 (273)
T ss_dssp             C---------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHHTTC
T ss_pred             cchhheeccCCc--ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHH--HHHHHcCC
Confidence            999998765432  222334568999999999999999999999999999999998 8999976433221  11111111


Q ss_pred             CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHHH
Q 002883          793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMRQ  867 (871)
Q Consensus       793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~~  867 (871)
                      .....                              ..++.++.+++.+||+.||++|||++|+++.|+++.+..+
T Consensus       227 ~~~~~------------------------------~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~k  271 (273)
T d1mp8a_         227 RLPMP------------------------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  271 (273)
T ss_dssp             CCCCC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCC------------------------------CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhh
Confidence            10000                              1223467799999999999999999999999999876654


No 29 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=1.6e-46  Score=389.75  Aligned_cols=252  Identities=24%  Similarity=0.349  Sum_probs=205.1

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc---------chHHHHHHHHHHHHcCC-CCccceeeeeecc
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR---------GASKSFIAECEALRSIR-HRNLVKIITSCSS  627 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~  627 (871)
                      .++|++.+.||+|+||+||+|++..+++.||||+++....         ...+.+.+|+.++++++ ||||+++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            3689999999999999999999998999999999964421         12346889999999996 9999999999876


Q ss_pred             cCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC
Q 002883          628 IDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNE  707 (871)
Q Consensus       628 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~  707 (871)
                      .     +..|+||||+++|+|.++++...       .+++.+++.++.||+.||+|||++   +|+||||||+||+++.+
T Consensus        82 ~-----~~~~ivmE~~~~g~L~~~l~~~~-------~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~  146 (277)
T d1phka_          82 N-----TFFFLVFDLMKKGELFDYLTEKV-------TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDD  146 (277)
T ss_dssp             S-----SEEEEEEECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred             C-----cceEEEEEcCCCchHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCC
Confidence            5     77999999999999999997644       599999999999999999999999   99999999999999999


Q ss_pred             CceEEeecccceecCCCCCCccccccccccccccCccccc------CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhh
Q 002883          708 MVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGA------LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEG  781 (871)
Q Consensus       708 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~  781 (871)
                      +.+||+|||.|+......    ......||+.|+|||++.      ...++.++||||+||++|||++|+.||.+.....
T Consensus       147 ~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~  222 (277)
T d1phka_         147 MNIKLTDFGFSCQLDPGE----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML  222 (277)
T ss_dssp             CCEEECCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             CCeEEccchheeEccCCC----ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH
Confidence            999999999999876432    223457999999999764      3457899999999999999999999998653322


Q ss_pred             hhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          782 LSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      . ............                            .+....+++++.+++.+||+.||++|||++|+++
T Consensus       223 ~-~~~i~~~~~~~~----------------------------~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         223 M-LRMIMSGNYQFG----------------------------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             H-HHHHHHTCCCCC----------------------------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             H-HHHHHhCCCCCC----------------------------CcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            1 111111111000                            0011123456789999999999999999999875


No 30 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-46  Score=392.59  Aligned_cols=256  Identities=28%  Similarity=0.433  Sum_probs=200.4

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA  637 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  637 (871)
                      .++|++.+.||+|+||+||+|++. +++.||||+++.... ..+.+.+|+.++++++|||||++++++.+      +..|
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~-~~~~vAiK~l~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~g~~~~------~~~~   87 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY   87 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEEC-CCCEEEEEEECcccC-CHHHHHHHHHHHHhcccCCEeEEEEEEec------CCeE
Confidence            467999999999999999999997 446799999965443 45789999999999999999999999753      3368


Q ss_pred             EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883          638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL  717 (871)
Q Consensus       638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  717 (871)
                      +||||+++|+|.+++......     .+++.+++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus        88 lv~Ey~~~g~l~~~~~~~~~~-----~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGl  159 (285)
T d1fmka3          88 IVTEYMSKGSLLDFLKGETGK-----YLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGL  159 (285)
T ss_dssp             EEECCCTTCBHHHHHSHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCT
T ss_pred             EEEEecCCCchhhhhhhcccc-----cchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccch
Confidence            999999999999998765422     599999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchhh
Q 002883          718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVA  797 (871)
Q Consensus       718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~  797 (871)
                      |+...+..  ........||+.|+|||++..+.++.++|||||||++|||+||..||............... .......
T Consensus       160 a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~-~~~~~~~  236 (285)
T d1fmka3         160 ARLIEDNE--YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCP  236 (285)
T ss_dssp             TC----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCC
T ss_pred             hhhccCCC--ceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCCCCC
Confidence            98765432  22233456899999999999999999999999999999999976666543222222222111 1111110


Q ss_pred             hhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHH
Q 002883          798 EIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEA  862 (871)
Q Consensus       798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i  862 (871)
                                                    ..+++++.+++.+||+.||++|||++||++.|++.
T Consensus       237 ------------------------------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~  271 (285)
T d1fmka3         237 ------------------------------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  271 (285)
T ss_dssp             ------------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             ------------------------------cccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhh
Confidence                                          12234677999999999999999999999988764


No 31 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-46  Score=395.45  Aligned_cols=276  Identities=21%  Similarity=0.321  Sum_probs=204.0

Q ss_pred             HHHHHHhhcCCCCCceeeccccceEEEEEECC-----CCcEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCccceeee
Q 002883          551 YAELLKATEGFSSANLIGIGGYGYVYKGILGT-----EETNVAVKVLDLQQ-RGASKSFIAECEALRSI-RHRNLVKIIT  623 (871)
Q Consensus       551 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~  623 (871)
                      .+.++...++|++.+.||+|+||.||+|++..     +++.||||+++... ....+.+.+|..++.++ +|+||+.+++
T Consensus         5 ~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~   84 (299)
T d1ywna1           5 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   84 (299)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeee
Confidence            34444455789999999999999999999753     34689999996433 33456677888888776 7899999999


Q ss_pred             eecccCcCCCceeeEEEeccCCCCHHHHhhcccccc---------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 002883          624 SCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQ---------NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVH  694 (871)
Q Consensus       624 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH  694 (871)
                      ++.+.    +...++|||||++|+|.+++.......         .....+++.++..++.||++||+|||++   +|||
T Consensus        85 ~~~~~----~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivH  157 (299)
T d1ywna1          85 ACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIH  157 (299)
T ss_dssp             EECST----TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred             eeccC----CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcC
Confidence            87553    245799999999999999997654321         1123589999999999999999999999   9999


Q ss_pred             cCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhC-CCC
Q 002883          695 CDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTG-KRP  773 (871)
Q Consensus       695 ~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG-~~p  773 (871)
                      |||||+|||++.++.+||+|||+|+...... .........||+.|+|||++.++.++.++|||||||++|||+|| ..|
T Consensus       158 rDlKp~NILl~~~~~~Kl~DFGla~~~~~~~-~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p  236 (299)
T d1ywna1         158 RDLAARNILLSEKNVVKICDFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP  236 (299)
T ss_dssp             SCCCGGGEEECGGGCEEECC------CCSCT-TSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             CcCCccceeECCCCcEEEccCcchhhccccc-cccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCC
Confidence            9999999999999999999999998765432 22233445799999999999999999999999999999999996 457


Q ss_pred             CchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHH
Q 002883          774 TDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQ  853 (871)
Q Consensus       774 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~  853 (871)
                      |....... ...............+                              .+++++.+++.+||+.||++|||++
T Consensus       237 ~~~~~~~~-~~~~~~~~~~~~~~~~------------------------------~~~~~l~~li~~cl~~dP~~Rpt~~  285 (299)
T d1ywna1         237 YPGVKIDE-EFCRRLKEGTRMRAPD------------------------------YTTPEMYQTMLDCWHGEPSQRPTFS  285 (299)
T ss_dssp             STTCCCSH-HHHHHHHHTCCCCCCT------------------------------TCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCCCHHH-HHHHHHhcCCCCCCCc------------------------------cCCHHHHHHHHHHcCCChhHCcCHH
Confidence            76432222 1111111111111100                              1234577899999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 002883          854 DAIMELQEAQKM  865 (871)
Q Consensus       854 evl~~L~~i~~~  865 (871)
                      |+++.|+++.+.
T Consensus       286 eil~~L~~ilq~  297 (299)
T d1ywna1         286 ELVEHLGNLLQA  297 (299)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC
Confidence            999999998654


No 32 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.7e-47  Score=392.45  Aligned_cols=259  Identities=29%  Similarity=0.398  Sum_probs=199.6

Q ss_pred             hcCCCCCceeeccccceEEEEEECCC---CcEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcC
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTE---ETNVAVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTR  631 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  631 (871)
                      .++|++.+.||+|+||+||+|++...   ...||||+++..   .....+.+.+|++++++++||||+++++++.+.   
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~---   83 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---   83 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec---
Confidence            35799999999999999999987432   346899998543   233456899999999999999999999998542   


Q ss_pred             CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 002883          632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH  711 (871)
Q Consensus       632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k  711 (871)
                         ..++||||+++|++.+++.....      .+++..++.++.||+.||.|||++   +|+||||||+||+++.++.+|
T Consensus        84 ---~~~lv~e~~~~~~l~~~~~~~~~------~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vk  151 (273)
T d1u46a_          84 ---PMKMVTELAPLGSLLDRLRKHQG------HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVK  151 (273)
T ss_dssp             ---SCEEEEECCTTCBHHHHHHHHGG------GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEE
T ss_pred             ---chheeeeeecCcchhhhhhcccC------CCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhcccccccee
Confidence               35899999999999998876543      499999999999999999999999   999999999999999999999


Q ss_pred             EeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhh
Q 002883          712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKM  790 (871)
Q Consensus       712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~  790 (871)
                      |+|||+++................|+..|+|||.+.+..++.++|||||||++|||+| |+.||........ .......
T Consensus       152 l~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~-~~~i~~~  230 (273)
T d1u46a_         152 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI-LHKIDKE  230 (273)
T ss_dssp             ECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-HHHHHTS
T ss_pred             eccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHH-HHHHHhC
Confidence            9999999987665434344445668899999999999999999999999999999998 8999986433322 1111111


Q ss_pred             CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHH
Q 002883          791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEA  862 (871)
Q Consensus       791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i  862 (871)
                      .......                              ..++.++.+++.+||+.||++|||+.||.+.|+++
T Consensus       231 ~~~~~~~------------------------------~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         231 GERLPRP------------------------------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CCCCCCC------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCc------------------------------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            1111100                              02234577999999999999999999999999875


No 33 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-46  Score=398.99  Aligned_cols=260  Identities=23%  Similarity=0.379  Sum_probs=204.0

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCc----EEEEEEeecc-ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCC
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEET----NVAVKVLDLQ-QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGN  633 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  633 (871)
                      .+|++++.||+|+||+||+|++..+++    +||+|.++.. .....+.+.+|++++++++|||||+++++|.+.     
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----   83 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-----   83 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-----
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----
Confidence            469999999999999999999977765    5888887533 334567899999999999999999999998653     


Q ss_pred             ceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 002883          634 EFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVG  713 (871)
Q Consensus       634 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~  713 (871)
                       ..++++||+.+|+|.+++.....      .+++..++.++.|||.||+|||++   +|+||||||+||+++.++.+||+
T Consensus        84 -~~~~v~e~~~~~~l~~~~~~~~~------~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~  153 (317)
T d1xkka_          84 -TVQLITQLMPFGCLLDYVREHKD------NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT  153 (317)
T ss_dssp             -SEEEEEECCTTCBHHHHHHHTSS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEEC
T ss_pred             -CeeEEEEeccCCccccccccccc------CCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEee
Confidence             35789999999999998876543      589999999999999999999999   99999999999999999999999


Q ss_pred             ecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCC
Q 002883          714 DFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGL  792 (871)
Q Consensus       714 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~  792 (871)
                      |||+|+....... ........||+.|+|||++.++.++.++|||||||++|||+| |+.||.......  .......+.
T Consensus       154 DFGla~~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~--~~~~i~~~~  230 (317)
T d1xkka_         154 DFGLAKLLGAEEK-EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGE  230 (317)
T ss_dssp             CCSHHHHTTTTCC---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG--HHHHHHHTC
T ss_pred             ccccceecccccc-cccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCC
Confidence            9999998764432 222333568999999999999999999999999999999999 888987543222  111111111


Q ss_pred             CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHHH
Q 002883          793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKMR  866 (871)
Q Consensus       793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~~  866 (871)
                      .....                              ..++.++.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus       231 ~~~~p------------------------------~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~~  274 (317)
T d1xkka_         231 RLPQP------------------------------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  274 (317)
T ss_dssp             CCCCC------------------------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSH
T ss_pred             CCCCC------------------------------cccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhCh
Confidence            10000                              022345778999999999999999999999999886543


No 34 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-46  Score=384.84  Aligned_cols=253  Identities=26%  Similarity=0.374  Sum_probs=198.9

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA  637 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  637 (871)
                      .++|++.+.||+|+||.||+|++.  ++.||||+++...  ..+.+.+|++++++++||||+++++++.+.    .+..|
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~----~~~~~   77 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLY   77 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC------CCE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEec----CCcEE
Confidence            457888999999999999999994  7789999996443  457899999999999999999999988543    14479


Q ss_pred             EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883          638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL  717 (871)
Q Consensus       638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  717 (871)
                      +||||+++|+|.+++......     .+++..++.++.||+.||.|||+.   +|+||||||+||+++.++.+|++|||+
T Consensus        78 lv~ey~~~g~L~~~l~~~~~~-----~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~  149 (262)
T d1byga_          78 IVTEYMAKGSLVDYLRSRGRS-----VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL  149 (262)
T ss_dssp             EEECCCTTEEHHHHHHHHHHH-----HCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred             EEEeccCCCCHHHHHHhcCCC-----CCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeeccccc
Confidence            999999999999999765432     589999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883          718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMFEEGLSLHKYAKMGLPDQV  796 (871)
Q Consensus       718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~  796 (871)
                      ++.....      .....++..|+|||++.++.+++++|||||||++|||+| |++||.......  .............
T Consensus       150 s~~~~~~------~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~--~~~~i~~~~~~~~  221 (262)
T d1byga_         150 TKEASST------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGYKMDA  221 (262)
T ss_dssp             ------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHHTTTCCCCC
T ss_pred             ceecCCC------CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCCCCC
Confidence            9865432      223457899999999988999999999999999999998 788877543222  1111111111111


Q ss_pred             hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883          797 AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK  864 (871)
Q Consensus       797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~  864 (871)
                      ..                              .++.++.+++.+||+.||++|||+.|+++.|+.++.
T Consensus       222 ~~------------------------------~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         222 PD------------------------------GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             CT------------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             Cc------------------------------cCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence            00                              122456789999999999999999999999998864


No 35 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=4.7e-46  Score=399.56  Aligned_cols=245  Identities=21%  Similarity=0.236  Sum_probs=204.7

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ---QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF  635 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  635 (871)
                      ++|++++.||+|+||.||+|++..+|+.||||+++..   .....+.+.+|+++++.++||||+++++++.+.     ..
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-----~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN-----SN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----SE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccc-----cc
Confidence            5799999999999999999999999999999998643   223456789999999999999999999998765     67


Q ss_pred             eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883          636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF  715 (871)
Q Consensus       636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  715 (871)
                      .++||||+.+|+|.+++...+       .+++..++.++.||+.||.|||++   +||||||||+|||++.++.+||+||
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~~-------~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DF  185 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRIG-------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDF  185 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred             cccccccccccchhhhHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeec
Confidence            899999999999999997754       599999999999999999999999   9999999999999999999999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      |+|+.+...      .....||+.|||||++.+..++.++||||+||++|||+||+.||....... ........... .
T Consensus       186 G~a~~~~~~------~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~~~-~  257 (350)
T d1rdqe_         186 GFAKRVKGR------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-IYEKIVSGKVR-F  257 (350)
T ss_dssp             TTCEECSSC------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCC-C
T ss_pred             eeeeecccc------cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHH-HHHHHhcCCCC-C
Confidence            999986532      223579999999999999999999999999999999999999997542221 11111111100 0


Q ss_pred             hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-----CHHHHHH
Q 002883          796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-----KIQDAIM  857 (871)
Q Consensus       796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----ta~evl~  857 (871)
                       .                              ..+..++.+++.+||+.||.+|+     |++|+++
T Consensus       258 -p------------------------------~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         258 -P------------------------------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             -C------------------------------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             -C------------------------------ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence             0                              01234567899999999999994     8999986


No 36 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=7.1e-46  Score=400.45  Aligned_cols=250  Identities=19%  Similarity=0.253  Sum_probs=198.8

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHH---HHHHHHHcCCCCccceeeeeecccCcC
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFI---AECEALRSIRHRNLVKIITSCSSIDTR  631 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~  631 (871)
                      .++|++.+.||+|+||.||+|++..+|+.||||++....   ......+.   +|+++++.++|||||++++++.+.   
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~---   79 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP---   79 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS---
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEEC---
Confidence            367999999999999999999999999999999985332   11222333   446777788999999999998775   


Q ss_pred             CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 002883          632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH  711 (871)
Q Consensus       632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k  711 (871)
                        +..|+||||++||+|.+++....       .+++..++.++.||+.||+|||++   +||||||||+|||++.++.+|
T Consensus        80 --~~~~ivmE~~~gg~L~~~l~~~~-------~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iK  147 (364)
T d1omwa3          80 --DKLSFILDLMNGGDLHYHLSQHG-------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVR  147 (364)
T ss_dssp             --SEEEEEECCCCSCBHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEE
T ss_pred             --CEEEEEEEecCCCcHHHHHHhcc-------cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEE
Confidence              67899999999999999997754       589999999999999999999999   999999999999999999999


Q ss_pred             EeecccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhh
Q 002883          712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKM  790 (871)
Q Consensus       712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~  790 (871)
                      |+|||+|+......     .....||+.|+|||++.. ..|++++||||+||++|||+||+.||................
T Consensus       148 l~DFGla~~~~~~~-----~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~  222 (364)
T d1omwa3         148 ISDLGLACDFSKKK-----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL  222 (364)
T ss_dssp             ECCCTTCEECSSSC-----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSS
T ss_pred             EeeeceeeecCCCc-----ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence            99999999765432     233579999999998864 568999999999999999999999997543221111111111


Q ss_pred             CCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCC-----HHHHHH
Q 002883          791 GLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMK-----IQDAIM  857 (871)
Q Consensus       791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----a~evl~  857 (871)
                      ..+.....                              .+.+++.+++.+||+.||++|||     |+|+++
T Consensus       223 ~~~~~~~~------------------------------~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         223 TMAVELPD------------------------------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             SCCCCCCS------------------------------SSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             cCCCCCCC------------------------------CCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            11111100                              12345679999999999999999     688875


No 37 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.6e-46  Score=398.41  Aligned_cols=257  Identities=20%  Similarity=0.286  Sum_probs=201.8

Q ss_pred             hcCCCCCc-eeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHc-CCCCccceeeeeecccCcCCCce
Q 002883          558 TEGFSSAN-LIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRS-IRHRNLVKIITSCSSIDTRGNEF  635 (871)
Q Consensus       558 ~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~  635 (871)
                      .++|.+.+ .||+|+||+||+|++..+++.||||+++.     ...+.+|++++.+ .+||||++++++|.+. .....+
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~-~~~~~~   83 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC   83 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeec-ccCCCE
Confidence            35788875 69999999999999998999999999863     2567789998765 4899999999998653 223367


Q ss_pred             eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC---CCceEE
Q 002883          636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN---EMVAHV  712 (871)
Q Consensus       636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl  712 (871)
                      +|+|||||+||+|.+++...+..     .+++.+++.++.||+.||+|||+.   +|+||||||+||+++.   ++.+||
T Consensus        84 ~~ivmEy~~gg~L~~~i~~~~~~-----~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl  155 (335)
T d2ozaa1          84 LLIVMECLDGGELFSRIQDRGDQ-----AFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKL  155 (335)
T ss_dssp             EEEEEECCCSEEHHHHHHSCSCC-----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEE
T ss_pred             EEEEEECCCCCcHHHHHHhcCCC-----CcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccc
Confidence            89999999999999999765422     599999999999999999999999   9999999999999975   567999


Q ss_pred             eecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC
Q 002883          713 GDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL  792 (871)
Q Consensus       713 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~  792 (871)
                      +|||+|+......    ......||+.|+|||++.+..|+.++||||+||++|+|+||+.||.+........ . .....
T Consensus       156 ~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~-~-~~~~i  229 (335)
T d2ozaa1         156 TDFGFAKETTSHN----SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-G-MKTRI  229 (335)
T ss_dssp             CCCTTCEECCCCC----CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------CC
T ss_pred             cccceeeeccCCC----ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHH-H-HHHHH
Confidence            9999998775432    2234579999999999999999999999999999999999999997542211100 0 00000


Q ss_pred             CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      ......+.                       .+....+++++.+++.+||+.||++|||+.|+++
T Consensus       230 ~~~~~~~~-----------------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         230 RMGQYEFP-----------------------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             CSCSSSCC-----------------------TTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hcCCCCCC-----------------------CcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            00000000                       0112244567889999999999999999999987


No 38 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.6e-46  Score=396.77  Aligned_cols=267  Identities=24%  Similarity=0.365  Sum_probs=209.2

Q ss_pred             HhhcCCCCCceeeccccceEEEEEECC-----CCcEEEEEEeecccc-chHHHHHHHHHHHHcCCCCccceeeeeecccC
Q 002883          556 KATEGFSSANLIGIGGYGYVYKGILGT-----EETNVAVKVLDLQQR-GASKSFIAECEALRSIRHRNLVKIITSCSSID  629 (871)
Q Consensus       556 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  629 (871)
                      ...++|++.+.||+|+||+||+|++..     +++.||||+++.... ...+++.+|++++++++||||+++++++... 
T Consensus        10 ~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~-   88 (301)
T d1lufa_          10 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG-   88 (301)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-
T ss_pred             CCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccC-
Confidence            345689999999999999999999753     457899999965433 2356799999999999999999999998765 


Q ss_pred             cCCCceeeEEEeccCCCCHHHHhhccccc-----------------ccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 002883          630 TRGNEFKALVYEFMPNGSLENWLNQKEDE-----------------QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSI  692 (871)
Q Consensus       630 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i  692 (871)
                          ...++||||+++|+|.+++......                 ......+++..++.++.|++.||+|||+.   +|
T Consensus        89 ----~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~i  161 (301)
T d1lufa_          89 ----KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF  161 (301)
T ss_dssp             ----SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred             ----CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---Ce
Confidence                5689999999999999999754321                 01123589999999999999999999999   99


Q ss_pred             EecCCCCCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCC-
Q 002883          693 VHCDLKPSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGK-  771 (871)
Q Consensus       693 vH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~-  771 (871)
                      |||||||+|||++.++.+||+|||+|+...+.. .........|++.|+|||.+.+..+++++|||||||++|||++|. 
T Consensus       162 vHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~  240 (301)
T d1lufa_         162 VHRDLATRNCLVGENMVVKIADFGLSRNIYSAD-YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL  240 (301)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGG-CBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             EeeEEcccceEECCCCcEEEccchhheeccCCc-cccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCC
Confidence            999999999999999999999999998664332 222233456889999999999999999999999999999999985 


Q ss_pred             CCCchhhhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCC
Q 002883          772 RPTDDMFEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMK  851 (871)
Q Consensus       772 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt  851 (871)
                      +||......+. .........++ ..                              ..++.++.+++.+||+.||++|||
T Consensus       241 ~p~~~~~~~e~-~~~v~~~~~~~-~p------------------------------~~~~~~~~~li~~cl~~~P~~RPt  288 (301)
T d1lufa_         241 QPYYGMAHEEV-IYYVRDGNILA-CP------------------------------ENCPLELYNLMRLCWSKLPADRPS  288 (301)
T ss_dssp             CTTTTSCHHHH-HHHHHTTCCCC-CC------------------------------TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCCCHHHH-HHHHHcCCCCC-CC------------------------------ccchHHHHHHHHHHcCCChhHCcC
Confidence            56765433321 11111111110 00                              022345779999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 002883          852 IQDAIMELQEAQ  863 (871)
Q Consensus       852 a~evl~~L~~i~  863 (871)
                      |.||++.|++|.
T Consensus       289 ~~ev~~~L~~i~  300 (301)
T d1lufa_         289 FCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhc
Confidence            999999999874


No 39 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-46  Score=395.18  Aligned_cols=248  Identities=24%  Similarity=0.328  Sum_probs=202.8

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHHHH-cCCCCccceeeeeecccCcCCCc
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ---RGASKSFIAECEALR-SIRHRNLVKIITSCSSIDTRGNE  634 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~~~~~~~~  634 (871)
                      ++|++.+.||+|+||+||+|++..+++.||||+++...   ....+.+.+|..++. .++||||+++++++.+.     .
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~-----~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK-----E   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS-----S
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccC-----C
Confidence            57999999999999999999999999999999996432   233456677777665 68999999999998776     6


Q ss_pred             eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883          635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD  714 (871)
Q Consensus       635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  714 (871)
                      ..|+||||+++|+|.+++....       .+++.+++.++.||+.||+|||++   +|+||||||+|||+++++.+||+|
T Consensus        77 ~~yivmEy~~~g~L~~~i~~~~-------~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~D  146 (320)
T d1xjda_          77 NLFFVMEYLNGGDLMYHIQSCH-------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIAD  146 (320)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred             ceeEEEeecCCCcHHHHhhccC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccc
Confidence            7899999999999999998654       589999999999999999999999   999999999999999999999999


Q ss_pred             cccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc
Q 002883          715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD  794 (871)
Q Consensus       715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~  794 (871)
                      ||.|+......   .......||+.|+|||++.+..+++++||||+||++|||+||+.||.+......  ........+.
T Consensus       147 FG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~--~~~i~~~~~~  221 (320)
T d1xjda_         147 FGMCKENMLGD---AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL--FHSIRMDNPF  221 (320)
T ss_dssp             CTTCBCCCCTT---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHCCCC
T ss_pred             cchhhhccccc---ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHH--HHHHHcCCCC
Confidence            99998654322   223345799999999999999999999999999999999999999985433221  1111111110


Q ss_pred             hhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHH-HHHH
Q 002883          795 QVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQ-DAIM  857 (871)
Q Consensus       795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~-evl~  857 (871)
                       ...                              .++.++.+++.+||+.||++|||+. |+++
T Consensus       222 -~p~------------------------------~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         222 -YPR------------------------------WLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             -CCT------------------------------TSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             -CCc------------------------------cCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence             000                              1234567999999999999999995 6754


No 40 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-45  Score=387.89  Aligned_cols=280  Identities=21%  Similarity=0.282  Sum_probs=203.3

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHH--HHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIA--ECEALRSIRHRNLVKIITSCSSIDTRGNEFK  636 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~--E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  636 (871)
                      ++|...+.||+|+||+||+|++  +|+.||||+++....   ..+.+  |+..+.+++||||+++++++.+.. ......
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~---~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~-~~~~~~   76 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQL   76 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch---hHHHHHHHHHHHhhCCCCcCcceEEEEEeCC-CcceEE
Confidence            4678889999999999999997  588999999964432   33444  444556779999999999987652 233568


Q ss_pred             eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeEecCCCCCceeeCCCCceE
Q 002883          637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC-----HTSIVHCDLKPSNVLLDNEMVAH  711 (871)
Q Consensus       637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~k  711 (871)
                      |+||||+++|+|.+++++.        .+++..++.++.|+|.||+|+|+..     ..+||||||||+|||++.++.+|
T Consensus        77 ~lv~Ey~~~g~L~~~l~~~--------~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~K  148 (303)
T d1vjya_          77 WLVSDYHEHGSLFDYLNRY--------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  148 (303)
T ss_dssp             EEEEECCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred             EEEEecccCCCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeE
Confidence            9999999999999999764        4899999999999999999999731     24999999999999999999999


Q ss_pred             EeecccceecCCCCCCc-cccccccccccccCcccccCCC------CCCccchhhHHHHHHHHHhCCCCCchhhhhhhhH
Q 002883          712 VGDFGLSRLLHDNSPDQ-TSTSRVKGSIGYVAPEYGALGE------VSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSL  784 (871)
Q Consensus       712 l~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~  784 (871)
                      |+|||+++......... .......||+.|+|||++.+..      ++.++|||||||++|||+||..||..........
T Consensus       149 l~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~  228 (303)
T d1vjya_         149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY  228 (303)
T ss_dssp             ECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred             EEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccch
Confidence            99999998876543221 2334567999999999876542      5778999999999999999998886432211110


Q ss_pred             HHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchh--HHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHH
Q 002883          785 HKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNL--RAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEA  862 (871)
Q Consensus       785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i  862 (871)
                      ......          ++.. ......  ......+|..  .....+....+.+++.+||+.||++|||+.||++.|+++
T Consensus       229 ~~~~~~----------~~~~-~~~~~~--~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i  295 (303)
T d1vjya_         229 YDLVPS----------DPSV-EEMRKV--VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             TTTSCS----------SCCH-HHHHHH--HTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhcccc----------cchH-HHHHHH--HhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            000000          0000 000000  0011112211  111224556788999999999999999999999999988


Q ss_pred             HHH
Q 002883          863 QKM  865 (871)
Q Consensus       863 ~~~  865 (871)
                      .+.
T Consensus       296 ~~~  298 (303)
T d1vjya_         296 SQQ  298 (303)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            754


No 41 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8e-46  Score=391.16  Aligned_cols=279  Identities=24%  Similarity=0.323  Sum_probs=205.3

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK  636 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  636 (871)
                      ++|++++.||+|+||+||+|++..+++.||||+++...  ....+.+.+|++++++++||||+++++++.+.     ...
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~-----~~~   76 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-----NKL   76 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccc-----cce
Confidence            58999999999999999999999999999999995433  22357889999999999999999999999776     678


Q ss_pred             eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883          637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG  716 (871)
Q Consensus       637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  716 (871)
                      |+||||+.+ ++.+++.....     ..+++..++.++.||+.||+|||++   +||||||||+|||++.++.+||+|||
T Consensus        77 ~iv~e~~~~-~~~~~~~~~~~-----~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG  147 (298)
T d1gz8a_          77 YLVFEFLHQ-DLKKFMDASAL-----TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFG  147 (298)
T ss_dssp             EEEEECCSE-EHHHHHHHTTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred             eEEEeecCC-chhhhhhhhcc-----cCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCC
Confidence            999999965 55555543322     2599999999999999999999999   99999999999999999999999999


Q ss_pred             cceecCCCCCCccccccccccccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE-VSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      .|+......   .......||+.|+|||...... ++.++||||+||++|+|++|+.||..................+..
T Consensus       148 ~a~~~~~~~---~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~  224 (298)
T d1gz8a_         148 LARAFGVPV---RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE  224 (298)
T ss_dssp             HHHHHCCCS---BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             cceeccCCc---ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCch
Confidence            998765432   2233457999999999866655 478999999999999999999999865433322222222222211


Q ss_pred             hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883          796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME  858 (871)
Q Consensus       796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~  858 (871)
                      ...   +..... .......................+++.+++.+||+.||++||||+|+++.
T Consensus       225 ~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         225 VVW---PGVTSM-PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             TTS---TTGGGS-TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhc---cccccc-cccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            000   000000 00000000111111222223445678899999999999999999999873


No 42 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-45  Score=385.61  Aligned_cols=267  Identities=25%  Similarity=0.380  Sum_probs=207.5

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCC-------cEEEEEEeecccc-chHHHHHHHHHHHHcC-CCCccceeeeeeccc
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEE-------TNVAVKVLDLQQR-GASKSFIAECEALRSI-RHRNLVKIITSCSSI  628 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~  628 (871)
                      .++|++.+.||+|+||.||+|+....+       ..||||+++.... .....+.+|+..+.++ +|||||+++++|.+.
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            468999999999999999999975443       4799999965443 3346788899988888 899999999999765


Q ss_pred             CcCCCceeeEEEeccCCCCHHHHhhccccc---------ccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCC
Q 002883          629 DTRGNEFKALVYEFMPNGSLENWLNQKEDE---------QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKP  699 (871)
Q Consensus       629 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp  699 (871)
                           ...++||||+++|+|.+++......         ......+++.+++.++.||+.||+|||+.   +||||||||
T Consensus        92 -----~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp  163 (299)
T d1fgka_          92 -----GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA  163 (299)
T ss_dssp             -----SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred             -----CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecc
Confidence                 5689999999999999999765421         11233589999999999999999999999   999999999


Q ss_pred             CceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchhh
Q 002883          700 SNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDMF  778 (871)
Q Consensus       700 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~  778 (871)
                      +|||++.++.+||+|||.++........ .......||+.|+|||.+.++.|++++||||||||+|||++ |++||....
T Consensus       164 ~NiLl~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~  242 (299)
T d1fgka_         164 RNVLVTEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  242 (299)
T ss_dssp             GGEEECTTCCEEECSTTCCCCGGGCCTT-CCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             cceeecCCCCeEeccchhhccccccccc-cccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC
Confidence            9999999999999999999877654322 23344568999999999999999999999999999999998 788887543


Q ss_pred             hhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883          779 EEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME  858 (871)
Q Consensus       779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~  858 (871)
                      ...  .......+.......                              .++.++.+++.+||+.||++||||.||++.
T Consensus       243 ~~~--~~~~i~~~~~~~~p~------------------------------~~~~~l~~li~~cl~~dP~~Rps~~eil~~  290 (299)
T d1fgka_         243 VEE--LFKLLKEGHRMDKPS------------------------------NCTNELYMMMRDCWHAVPSQRPTFKQLVED  290 (299)
T ss_dssp             HHH--HHHHHHTTCCCCCCS------------------------------SCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHH--HHHHHHcCCCCCCCc------------------------------cchHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            322  111111111111000                              123457799999999999999999999999


Q ss_pred             HHHHHHH
Q 002883          859 LQEAQKM  865 (871)
Q Consensus       859 L~~i~~~  865 (871)
                      |+++.+.
T Consensus       291 L~~i~a~  297 (299)
T d1fgka_         291 LDRIVAL  297 (299)
T ss_dssp             HHHHHHH
T ss_pred             HHHHhhc
Confidence            9999765


No 43 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.1e-46  Score=391.82  Aligned_cols=269  Identities=21%  Similarity=0.252  Sum_probs=197.6

Q ss_pred             CCceeeccccceEEEEEECCCCcEEEEEEeeccccc-----hHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883          563 SANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRG-----ASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA  637 (871)
Q Consensus       563 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  637 (871)
                      .+++||+|+||+||+|++..+++.||||+++.....     ..+.+.+|+.++++++|||||++++++...     +..|
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~-----~~~~   76 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK-----SNIS   76 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT-----TCCE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccC-----Ccee
Confidence            357899999999999999999999999998543321     134688999999999999999999998776     6689


Q ss_pred             EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883          638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL  717 (871)
Q Consensus       638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  717 (871)
                      +||||+.++++..+.....       .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||.
T Consensus        77 ivmE~~~~~~~~~~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~  146 (299)
T d1ua2a_          77 LVFDFMETDLEVIIKDNSL-------VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGL  146 (299)
T ss_dssp             EEEECCSEEHHHHHTTCCS-------SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred             ehhhhhcchHHhhhhhccc-------CCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCcc
Confidence            9999998887776665432       589999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch-
Q 002883          718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ-  795 (871)
Q Consensus       718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~-  795 (871)
                      |+......   ......+||+.|+|||++.+ ..|+.++||||+||++|||+||+.||....+.+.........+.+.. 
T Consensus       147 a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~  223 (299)
T d1ua2a_         147 AKSFGSPN---RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEE  223 (299)
T ss_dssp             GSTTTSCC---CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             ccccCCCc---ccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChh
Confidence            98765432   12233579999999998764 46799999999999999999999999764433221111111111111 


Q ss_pred             -hhhhcChhHHHHHHHHHhhhhhhcC-chhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          796 -VAEIIDPAILEEALEIQAGIVKELQ-PNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       796 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                       ..........        ...+..+ ......+....+++.+++.+||+.||++||||+|+++
T Consensus       224 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         224 QWPDMCSLPDY--------VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             TSSSTTSSTTC--------CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hccchhccchh--------hhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence             0000000000        0000000 0111112233456889999999999999999999986


No 44 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9e-45  Score=383.60  Aligned_cols=258  Identities=22%  Similarity=0.359  Sum_probs=203.1

Q ss_pred             CceeeccccceEEEEEECCCC---cEEEEEEeec-cccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeEE
Q 002883          564 ANLIGIGGYGYVYKGILGTEE---TNVAVKVLDL-QQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKALV  639 (871)
Q Consensus       564 ~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv  639 (871)
                      .++||+|+||+||+|++..++   ..||||+++. ......+++.+|++++++++||||+++++++.+.    ....++|
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~----~~~~~lv  107 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----EGSPLVV  107 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEET----TTEEEEE
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEec----CCceEEE
Confidence            478999999999999985433   3689999863 3444557899999999999999999999997653    2457999


Q ss_pred             EeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccce
Q 002883          640 YEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSR  719 (871)
Q Consensus       640 ~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  719 (871)
                      ||||++|+|.+++.....      ..++..+..++.|++.||.|+|+.   +|+||||||+|||+++++.+||+|||+++
T Consensus       108 ~E~~~~g~l~~~~~~~~~------~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~  178 (311)
T d1r0pa_         108 LPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR  178 (311)
T ss_dssp             EECCTTCBHHHHHHCTTC------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGC
T ss_pred             EEEeecCchhhhhccccc------cchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchh
Confidence            999999999999876543      478889999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCCCc-cccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchhhh
Q 002883          720 LLHDNSPDQ-TSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQVAE  798 (871)
Q Consensus       720 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~  798 (871)
                      ......... .......||+.|+|||.+..+.++.++||||||+++|||+||..||........... ....+...... 
T Consensus       179 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~-~i~~g~~~~~p-  256 (311)
T d1r0pa_         179 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-YLLQGRRLLQP-  256 (311)
T ss_dssp             CTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHH-HHHTTCCCCCC-
T ss_pred             hccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHH-HHHcCCCCCCc-
Confidence            875443222 223345689999999999999999999999999999999998888765332221111 11111110000 


Q ss_pred             hcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHHH
Q 002883          799 IIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQKM  865 (871)
Q Consensus       799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~~  865 (871)
                                                   ..++.++.+++.+||+.||++|||+.||++.|+++.+.
T Consensus       257 -----------------------------~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         257 -----------------------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             -----------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             -----------------------------ccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence                                         01234577999999999999999999999999999764


No 45 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-45  Score=392.00  Aligned_cols=281  Identities=24%  Similarity=0.306  Sum_probs=204.4

Q ss_pred             hcCCCCCceeeccccceEEEEEECCC-CcEEEEEEeeccc--cchHHHHHHHHHHHHcC---CCCccceeeeeecccCcC
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTE-ETNVAVKVLDLQQ--RGASKSFIAECEALRSI---RHRNLVKIITSCSSIDTR  631 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~  631 (871)
                      .++|++++.||+|+||+||+|++..+ ++.||||+++...  ......+.+|+.+++.+   +||||++++++|......
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            47899999999999999999999655 6789999985432  22234566788777665   799999999998765555


Q ss_pred             CCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 002883          632 GNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAH  711 (871)
Q Consensus       632 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k  711 (871)
                      .....+++|||++++.+........      ..+++..++.++.|++.||+|||++   +||||||||+|||++.++.+|
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~------~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~k  156 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPE------PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIK  156 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCT------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred             cCceEEEEEEeccCCchhhhhhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCee
Confidence            5678899999998877665544332      2589999999999999999999999   999999999999999999999


Q ss_pred             EeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC
Q 002883          712 VGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG  791 (871)
Q Consensus       712 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~  791 (871)
                      |+|||.+.....    ........||+.|+|||++.+..|+.++||||+||++|||++|+.||.................
T Consensus       157 l~dfg~~~~~~~----~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~  232 (305)
T d1blxa_         157 LADFGLARIYSF----QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG  232 (305)
T ss_dssp             ECSCCSCCCCCG----GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             ecchhhhhhhcc----cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhC
Confidence            999999876432    2234456799999999999999999999999999999999999999986543322111111111


Q ss_pred             CCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          792 LPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      .+... .+........     ...................+.+.+++.+||+.||++||||+|+++
T Consensus       233 ~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         233 LPGEE-DWPRDVALPR-----QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             CCCGG-GSCTTCSSCG-----GGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCchh-cccccccchh-----hhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            11110 0000000000     000000000011111223456778999999999999999999986


No 46 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3e-45  Score=388.29  Aligned_cols=264  Identities=23%  Similarity=0.364  Sum_probs=205.0

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcE--EEEEEeecc-ccchHHHHHHHHHHHHcC-CCCccceeeeeecccCcCCCc
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETN--VAVKVLDLQ-QRGASKSFIAECEALRSI-RHRNLVKIITSCSSIDTRGNE  634 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~  634 (871)
                      ++|++.+.||+|+||+||+|++..++..  ||||.++.. .....+.+.+|+++++++ +||||++++++|.+.     +
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~-----~   84 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----G   84 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET-----T
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecC-----C
Confidence            5789999999999999999999877764  677777432 333456789999999998 799999999999875     6


Q ss_pred             eeeEEEeccCCCCHHHHhhccccc---------ccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC
Q 002883          635 FKALVYEFMPNGSLENWLNQKEDE---------QNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD  705 (871)
Q Consensus       635 ~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~  705 (871)
                      ..|+||||+++|+|.++++.....         ......+++.++..++.|||.||.|+|+.   +|+||||||+|||++
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~  161 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG  161 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEc
Confidence            789999999999999999764211         11234699999999999999999999999   999999999999999


Q ss_pred             CCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCC-CCchhhhhhhhH
Q 002883          706 NEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKR-PTDDMFEEGLSL  784 (871)
Q Consensus       706 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~-pf~~~~~~~~~~  784 (871)
                      .++.+||+|||+|+......    ......||..|+|||.+.++.++.++|||||||++|||++|.. ||.......  .
T Consensus       162 ~~~~~kl~DfG~a~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~--~  235 (309)
T d1fvra_         162 ENYVAKIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--L  235 (309)
T ss_dssp             GGGCEEECCTTCEESSCEEC----CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--H
T ss_pred             CCCceEEccccccccccccc----cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHH--H
Confidence            99999999999998654321    1223458999999999999999999999999999999999764 665432221  1


Q ss_pred             HHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883          785 HKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK  864 (871)
Q Consensus       785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~  864 (871)
                      .............                              ..+++++.+++.+||+.||++|||++||++.|+++.+
T Consensus       236 ~~~i~~~~~~~~~------------------------------~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         236 YEKLPQGYRLEKP------------------------------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             HHHGGGTCCCCCC------------------------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCC------------------------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            1111111110000                              0123467799999999999999999999999999876


Q ss_pred             HH
Q 002883          865 MR  866 (871)
Q Consensus       865 ~~  866 (871)
                      ..
T Consensus       286 ~~  287 (309)
T d1fvra_         286 ER  287 (309)
T ss_dssp             SS
T ss_pred             cC
Confidence            43


No 47 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.2e-45  Score=385.71  Aligned_cols=269  Identities=23%  Similarity=0.365  Sum_probs=211.9

Q ss_pred             hhcCCCCCceeeccccceEEEEEEC-----CCCcEEEEEEeecccc-chHHHHHHHHHHHHcC-CCCccceeeeeecccC
Q 002883          557 ATEGFSSANLIGIGGYGYVYKGILG-----TEETNVAVKVLDLQQR-GASKSFIAECEALRSI-RHRNLVKIITSCSSID  629 (871)
Q Consensus       557 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~  629 (871)
                      ..++|++.+.||+|+||.||+|++.     .+++.||||+++.... .....+.+|+.+++.+ +|||||++++++.+. 
T Consensus        21 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~-   99 (311)
T d1t46a_          21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG-   99 (311)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred             CHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC-
Confidence            3468999999999999999999863     3567899999965433 3455788999999999 699999999998765 


Q ss_pred             cCCCceeeEEEeccCCCCHHHHhhcccccc-----------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 002883          630 TRGNEFKALVYEFMPNGSLENWLNQKEDEQ-----------NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLK  698 (871)
Q Consensus       630 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk  698 (871)
                          ...++|||||++|+|.++++......           .....+++..+..++.||+.|++|||++   ++||||||
T Consensus       100 ----~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLK  172 (311)
T d1t46a_         100 ----GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA  172 (311)
T ss_dssp             ----SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred             ----CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecccc
Confidence                56899999999999999997654211           1223589999999999999999999999   99999999


Q ss_pred             CCceeeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCchh
Q 002883          699 PSNVLLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFT-GKRPTDDM  777 (871)
Q Consensus       699 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~  777 (871)
                      |+||+++.++.+|++|||.++...... .........||+.|+|||.+.++.++.++|||||||++|||+| |.+||...
T Consensus       173 p~NIl~~~~~~~ki~DfG~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~  251 (311)
T d1t46a_         173 ARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM  251 (311)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCTTSCT-TSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             cccccccccCcccccccchheeccCCC-cceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999999876543 2233445678999999999999999999999999999999999 55555432


Q ss_pred             hhhhhhHHHHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          778 FEEGLSLHKYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      . ....+........+....+                              ..+.++.+++.+||+.||++|||++|+++
T Consensus       252 ~-~~~~~~~~i~~~~~~~~~~------------------------------~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         252 P-VDSKFYKMIKEGFRMLSPE------------------------------HAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             C-SSHHHHHHHHHTCCCCCCT------------------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             C-HHHHHHHHHhcCCCCCCcc------------------------------cccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            2 2222222222221111111                              12345779999999999999999999999


Q ss_pred             HHHHHHHH
Q 002883          858 ELQEAQKM  865 (871)
Q Consensus       858 ~L~~i~~~  865 (871)
                      .|+++.+.
T Consensus       301 ~L~~~i~~  308 (311)
T d1t46a_         301 LIEKQISE  308 (311)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHhhcc
Confidence            99987543


No 48 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-44  Score=389.02  Aligned_cols=284  Identities=20%  Similarity=0.236  Sum_probs=208.8

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceee
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKA  637 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  637 (871)
                      .+|++++.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.........+.|
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            57999999999999999999999999999999996433 33456788999999999999999999998766444445555


Q ss_pred             EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 002883          638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFGL  717 (871)
Q Consensus       638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  717 (871)
                      +++ |+.+|+|.+++...        .+++..++.++.|++.||+|||++   |||||||||+|||++.++.+||+|||+
T Consensus        88 l~~-~~~~g~L~~~l~~~--------~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~  155 (345)
T d1pmea_          88 LVT-HLMGADLYKLLKTQ--------HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL  155 (345)
T ss_dssp             EEE-ECCCEEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEE-eecCCchhhhhhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCc
Confidence            655 55699999999653        489999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCCCccccccccccccccCccccc-CCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCchh
Q 002883          718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGA-LGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQV  796 (871)
Q Consensus       718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~  796 (871)
                      |.................||+.|+|||++. +..++.++||||+||++|+|++|+.||......+...........+...
T Consensus       156 a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~  235 (345)
T d1pmea_         156 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE  235 (345)
T ss_dssp             CEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             eeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChh
Confidence            987655433333345567999999999874 4567899999999999999999999997654333222222222222211


Q ss_pred             --hhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883          797 --AEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME  858 (871)
Q Consensus       797 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~  858 (871)
                        ............    ..............+.....++.+++.+||+.||++||||+|+++.
T Consensus       236 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         236 DLNCIINLKARNYL----LSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHTCCCHHHHHHH----HTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhhhhhhccc----ccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence              111111111000    0011111111222222344568899999999999999999999863


No 49 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-45  Score=383.61  Aligned_cols=240  Identities=20%  Similarity=0.307  Sum_probs=195.8

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeecccc------chHHHHHHHHHHHHcCC--CCccceeeeeecccCc
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR------GASKSFIAECEALRSIR--HRNLVKIITSCSSIDT  630 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~  630 (871)
                      ++|++.+.||+|+||+||+|++..+++.||||+++....      ....++.+|+.++++++  ||||+++++++.+.  
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~--   81 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP--   81 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS--
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC--
Confidence            579999999999999999999999999999999864321      11234678999999986  89999999998775  


Q ss_pred             CCCceeeEEEeccCC-CCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-CC
Q 002883          631 RGNEFKALVYEFMPN-GSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN-EM  708 (871)
Q Consensus       631 ~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~  708 (871)
                         +..|+||||+.+ +++.+++....       .+++.+++.++.||+.||+|||+.   +|+||||||+||+++. ++
T Consensus        82 ---~~~~lv~e~~~~~~~l~~~~~~~~-------~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~  148 (273)
T d1xwsa_          82 ---DSFVLILERPEPVQDLFDFITERG-------ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRG  148 (273)
T ss_dssp             ---SEEEEEEECCSSEEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTT
T ss_pred             ---CeEEEEEEeccCcchHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCC
Confidence               678999999976 68888887644       599999999999999999999999   9999999999999985 47


Q ss_pred             ceEEeecccceecCCCCCCccccccccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHH
Q 002883          709 VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEV-STHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKY  787 (871)
Q Consensus       709 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~  787 (871)
                      .+||+|||+|+.....     ......||+.|+|||++.+..+ +.++||||+||++|||+||+.||.....       .
T Consensus       149 ~vkl~DFG~a~~~~~~-----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-------i  216 (273)
T d1xwsa_         149 ELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------I  216 (273)
T ss_dssp             EEEECCCTTCEECCSS-----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------H
T ss_pred             eEEECccccceecccc-----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH-------H
Confidence            9999999999875432     2234579999999999877766 5779999999999999999999975321       0


Q ss_pred             hhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          788 AKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      ......      +.+                          .++.++.+++.+||+.||++|||++|+++
T Consensus       217 ~~~~~~------~~~--------------------------~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         217 IRGQVF------FRQ--------------------------RVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHCCCC------CSS--------------------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhcccC------CCC--------------------------CCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            110000      000                          12245678999999999999999999987


No 50 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=1.8e-44  Score=379.12  Aligned_cols=276  Identities=22%  Similarity=0.278  Sum_probs=201.2

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK  636 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  636 (871)
                      ++|++.+.||+|+||+||+|++. +++.||||+++...  ....+.+.+|+.++++++||||+++++++...     ...
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-----~~~   75 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK-----KRL   75 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS-----SCE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccC-----Cce
Confidence            58999999999999999999996 78999999995432  33357899999999999999999999998776     668


Q ss_pred             eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883          637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG  716 (871)
Q Consensus       637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  716 (871)
                      +++||++.++.+..+.....       .+++..++.++.||+.||+|||+.   +||||||||+|||++.++.+|++|||
T Consensus        76 ~i~~e~~~~~~~~~~~~~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG  145 (286)
T d1ob3a_          76 VLVFEHLDQDLKKLLDVCEG-------GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFG  145 (286)
T ss_dssp             EEEEECCSEEHHHHHHTSTT-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTT
T ss_pred             eEEEEeehhhhHHHHHhhcC-------CcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccc
Confidence            99999998777766665433       599999999999999999999999   99999999999999999999999999


Q ss_pred             cceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      .|.......   .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||.+....+.....+.....+..
T Consensus       146 ~a~~~~~~~---~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~  222 (286)
T d1ob3a_         146 LARAFGIPV---RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNS  222 (286)
T ss_dssp             HHHHHCC------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             cceecccCc---cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCCh
Confidence            998765432   22333468999999998765 45689999999999999999999999865433322221211111110


Q ss_pred             hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                       ..+.+..-....   ......................+.+++.+||+.||++||||+|+++
T Consensus       223 -~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         223 -KNWPNVTELPKY---DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             -TTSTTGGGSTTC---CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -hhccchhhhhhc---ccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             000000000000   0000000000011111223456789999999999999999999985


No 51 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.4e-44  Score=384.24  Aligned_cols=280  Identities=20%  Similarity=0.239  Sum_probs=205.5

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-CCCc
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT-RGNE  634 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~  634 (871)
                      .++|++++.||+|+||+||+|++..+++.||||+++..  .....+.+.+|++++++++|||||+++++|...+. ....
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            36899999999999999999999999999999999643  23345678899999999999999999999876533 2345


Q ss_pred             eeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 002883          635 FKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGD  714 (871)
Q Consensus       635 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  714 (871)
                      ++|+||||+ +.+|..+++..        .+++..++.++.||+.||+|||++   ||+||||||+|||++.++.+|++|
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~D  164 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHE--------KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILD  164 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred             eEEEEEecc-cccHHHHHHhc--------cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhccccccccccc
Confidence            679999999 67888877543        499999999999999999999999   999999999999999999999999


Q ss_pred             cccceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhC-C
Q 002883          715 FGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMG-L  792 (871)
Q Consensus       715 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~-~  792 (871)
                      ||.|+.....      .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||................. .
T Consensus       165 fg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~  238 (346)
T d1cm8a_         165 FGLARQADSE------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP  238 (346)
T ss_dssp             CTTCEECCSS------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             ccceeccCCc------cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCC
Confidence            9999876432      233569999999998765 4568999999999999999999999976543322222111122 2


Q ss_pred             CchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883          793 PDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME  858 (871)
Q Consensus       793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~  858 (871)
                      +....+............   ....................+.+++.+||+.||++||||+|+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         239 PAEFVQRLQSDEAKNYMK---GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             CHHHHHTCSCHHHHHHHH---HSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cHHHHhhhcchhhhhhhc---cCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            222222222222111111   111111112222223344567899999999999999999999873


No 52 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.4e-44  Score=379.63  Aligned_cols=266  Identities=22%  Similarity=0.374  Sum_probs=209.1

Q ss_pred             HhhcCCCCCceeeccccceEEEEEECC-----CCcEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCccceeeeeecccC
Q 002883          556 KATEGFSSANLIGIGGYGYVYKGILGT-----EETNVAVKVLDLQQ-RGASKSFIAECEALRSIRHRNLVKIITSCSSID  629 (871)
Q Consensus       556 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  629 (871)
                      ...++|++.+.||+|+||+||+|.+..     +++.||||+++... ......+.+|++++++++||||+++++++... 
T Consensus        17 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~-   95 (308)
T d1p4oa_          17 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG-   95 (308)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS-
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecC-
Confidence            345788999999999999999999852     35789999996433 33345689999999999999999999998665 


Q ss_pred             cCCCceeeEEEeccCCCCHHHHhhcccccc---cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC
Q 002883          630 TRGNEFKALVYEFMPNGSLENWLNQKEDEQ---NQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN  706 (871)
Q Consensus       630 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~  706 (871)
                          ...++||||+++|+|.+++.......   .....+++..+..++.|+|+||.|||++   +|+||||||+|||+++
T Consensus        96 ----~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~  168 (308)
T d1p4oa_          96 ----QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE  168 (308)
T ss_dssp             ----SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECT
T ss_pred             ----CceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecC
Confidence                56899999999999999987653221   1122478999999999999999999999   9999999999999999


Q ss_pred             CCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCC-CCCchhhhhhhhHH
Q 002883          707 EMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGK-RPTDDMFEEGLSLH  785 (871)
Q Consensus       707 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~-~pf~~~~~~~~~~~  785 (871)
                      ++++||+|||+|+...... .........||+.|+|||.+.++.++.++|||||||++|||+||. .||........ ..
T Consensus       169 ~~~~Kl~DFGla~~~~~~~-~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~-~~  246 (308)
T d1p4oa_         169 DFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LR  246 (308)
T ss_dssp             TCCEEECCTTCCCGGGGGG-CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH-HH
T ss_pred             CceEEEeecccceeccCCc-ceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHH-HH
Confidence            9999999999998765432 222334456899999999999999999999999999999999985 66764332211 11


Q ss_pred             HHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHH
Q 002883          786 KYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEA  862 (871)
Q Consensus       786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i  862 (871)
                      .......++..                               ..++..+.+++.+||+.||++|||++||++.|++.
T Consensus       247 ~i~~~~~~~~p-------------------------------~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         247 FVMEGGLLDKP-------------------------------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             HHHTTCCCCCC-------------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHHhCCCCCCc-------------------------------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            11111111000                               01234678999999999999999999999998765


No 53 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.7e-43  Score=373.77  Aligned_cols=285  Identities=21%  Similarity=0.253  Sum_probs=203.4

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCccceeeeeecccCc---CC
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQ--QRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT---RG  632 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~  632 (871)
                      .++|++++.||+|+||+||+|++..+++.||||++...  .....+++.+|++++++++||||+++++++.....   ..
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            47899999999999999999999999999999998533  23345778899999999999999999999865422   12


Q ss_pred             CceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 002883          633 NEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHV  712 (871)
Q Consensus       633 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl  712 (871)
                      ....|+||||++++.+..+.....       .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+|+
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~-------~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl  158 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLV-------KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKL  158 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEE
T ss_pred             CceEEEEEeccCCCccchhhhccc-------ccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEe
Confidence            356899999998776665544322       589999999999999999999999   9999999999999999999999


Q ss_pred             eecccceecCCCCCC-ccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHH-Hhh
Q 002883          713 GDFGLSRLLHDNSPD-QTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHK-YAK  789 (871)
Q Consensus       713 ~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~-~~~  789 (871)
                      +|||+|......... ........||+.|+|||++.+. .+++++||||+||++|||++|+.||............ ...
T Consensus       159 ~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~  238 (318)
T d3blha1         159 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC  238 (318)
T ss_dssp             CCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             eecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhc
Confidence            999999876543211 1222335699999999987654 6899999999999999999999999764433221111 111


Q ss_pred             hCCCchhh-hhcChhHHHHHHHHHhhhhhhcCchhHHhHH--HHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          790 MGLPDQVA-EIIDPAILEEALEIQAGIVKELQPNLRAKFH--EIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       790 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      ...++... ...........     .......+.....+.  .....+.+++.+||++||++||||+|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         239 GSITPEVWPNVDNYELYEKL-----ELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             CCCCTTTSTTCCCC------------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCChhhccccchhhhhhhh-----cccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence            11221111 11111110000     001111122222222  22446778999999999999999999986


No 54 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=8.9e-43  Score=368.61  Aligned_cols=263  Identities=18%  Similarity=0.270  Sum_probs=202.0

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCceeeE
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFKAL  638 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l  638 (871)
                      ++|++.+.||+|+||+||+|++..+++.||||++.....  .+.+.+|+++++.++|++++..++.+...    ....++
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~----~~~~~i   80 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAE----GDYNVM   80 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEE----TTEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEec----CCEEEE
Confidence            579999999999999999999998999999999865433  24578899999999887766666555332    266899


Q ss_pred             EEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC---CCCceEEeec
Q 002883          639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLD---NEMVAHVGDF  715 (871)
Q Consensus       639 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Df  715 (871)
                      ||||+ ++++.+.+.....      .+++..+..++.|++.||+|||++   +|+||||||+||+++   .+..+|++||
T Consensus        81 vme~~-~~~l~~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DF  150 (299)
T d1ckia_          81 VMELL-GPSLEDLFNFCSR------KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF  150 (299)
T ss_dssp             EEECC-CCBHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred             EEEEc-CCchhhhhhhccC------CCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeecc
Confidence            99999 6677776655432      599999999999999999999999   999999999999985   3557999999


Q ss_pred             ccceecCCCCCCc----cccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHH--HHhh
Q 002883          716 GLSRLLHDNSPDQ----TSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLH--KYAK  789 (871)
Q Consensus       716 g~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~--~~~~  789 (871)
                      |+|+.........    .......||+.|+|||.+.+..+++++|||||||++|||+||+.||...........  ....
T Consensus       151 G~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~  230 (299)
T d1ckia_         151 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE  230 (299)
T ss_dssp             SSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHH
T ss_pred             CcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhc
Confidence            9999876543221    123345799999999999999999999999999999999999999975322211110  0000


Q ss_pred             hCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883          790 MGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK  864 (871)
Q Consensus       790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~  864 (871)
                      .                           ............++.++.+++..|++.+|++||+++++.+.|+.+..
T Consensus       231 ~---------------------------~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         231 K---------------------------KMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             H---------------------------HHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             c---------------------------cCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            0                           00000011112345678899999999999999999999999988754


No 55 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.3e-42  Score=373.87  Aligned_cols=283  Identities=19%  Similarity=0.178  Sum_probs=200.3

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCc-CCCce
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDT-RGNEF  635 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~  635 (871)
                      ++|++.++||+|+||+||+|++..+|+.||||++....  ....+++.+|+.++++++||||++++++|..... +...+
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            68999999999999999999999999999999996443  3344678899999999999999999999865533 24578


Q ss_pred             eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883          636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF  715 (871)
Q Consensus       636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  715 (871)
                      .|+||||+.++ +.+.+..         .+++..++.++.||+.||+|||+.   ||+||||||+|||++.++.+|++||
T Consensus        97 ~~iv~Ey~~~~-l~~~~~~---------~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df  163 (355)
T d2b1pa1          97 VYLVMELMDAN-LCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF  163 (355)
T ss_dssp             EEEEEECCSEE-HHHHHTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred             eEEEEeccchH-HHHhhhc---------CCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeech
Confidence            89999999665 4444432         489999999999999999999999   9999999999999999999999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC-Cc
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL-PD  794 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~-~~  794 (871)
                      |.++.....    .......+|+.|+|||++.+..+++++||||+||++|+|++|+.||.................. ..
T Consensus       164 ~~~~~~~~~----~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~  239 (355)
T d2b1pa1         164 GLARTAGTS----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP  239 (355)
T ss_dssp             CC-------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             hhhhccccc----cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCH
Confidence            998865532    2333456899999999999999999999999999999999999999754332221111111111 11


Q ss_pred             hhhhhcChhHHHHHHHH--------HhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHH
Q 002883          795 QVAEIIDPAILEEALEI--------QAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIME  858 (871)
Q Consensus       795 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~  858 (871)
                      .................        .........+............+.+|+.+||+.||++||||+|+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            11111111111100000        00000111122223344567788999999999999999999999853


No 56 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.9e-43  Score=379.17  Aligned_cols=275  Identities=20%  Similarity=0.258  Sum_probs=196.7

Q ss_pred             CCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecccCc-CCCceeeE
Q 002883          560 GFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSSIDT-RGNEFKAL  638 (871)
Q Consensus       560 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~~l  638 (871)
                      +|+..++||+|+||+||+|++..+++.||||++.....    ...+|++++++++||||++++++|..... .+..+.|+
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            58889999999999999999999999999999965432    23479999999999999999999865432 34467899


Q ss_pred             EEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-ceEEeeccc
Q 002883          639 VYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM-VAHVGDFGL  717 (871)
Q Consensus       639 v~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~  717 (871)
                      ||||++++. .+.+.....   ....+++.+++.++.||+.||+|||++   ||+||||||+|||++.++ .+||+|||+
T Consensus        97 v~Ey~~~~~-~~~l~~~~~---~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~  169 (350)
T d1q5ka_          97 VLDYVPETV-YRVARHYSR---AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS  169 (350)
T ss_dssp             EEECCSEEH-HHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTT
T ss_pred             EEeccCCcc-HHHHHhhhh---ccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccc
Confidence            999997654 433332111   122699999999999999999999999   999999999999999775 899999999


Q ss_pred             ceecCCCCCCccccccccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCc-h
Q 002883          718 SRLLHDNSPDQTSTSRVKGSIGYVAPEYGAL-GEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPD-Q  795 (871)
Q Consensus       718 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~-~  795 (871)
                      |.......    ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.........+.+. .
T Consensus       170 a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~  245 (350)
T d1q5ka_         170 AKQLVRGE----PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE  245 (350)
T ss_dssp             CEECCTTS----CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             hhhccCCc----ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHH
Confidence            98775432    2223569999999997654 5789999999999999999999999975433322111111111111 0


Q ss_pred             -hhhhcChhHHHHHHHHHhhhhhhcC--chhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          796 -VAEIIDPAILEEALEIQAGIVKELQ--PNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       796 -~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                       ...... ...       ........  +...........++.+++.+||+.||++||||.|+++
T Consensus       246 ~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         246 QIREMNP-NYT-------EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             HHHHHCC-----------CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhhcc-chh-------hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             000000 000       00000000  0000011123456789999999999999999999986


No 57 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=3e-43  Score=377.46  Aligned_cols=274  Identities=20%  Similarity=0.229  Sum_probs=199.5

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccCcCCCceee
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEFKA  637 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~  637 (871)
                      ++|++++.||+|+||+||+|++..+++.||||+++..   ..+++.+|+++++++. ||||+++++++....   ....+
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~---~~~~~  108 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPV---SRTPA  108 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---TCSEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecC---CCcee
Confidence            5799999999999999999999999999999999643   3467889999999995 999999999986432   25689


Q ss_pred             EEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-ceEEeecc
Q 002883          638 LVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEM-VAHVGDFG  716 (871)
Q Consensus       638 lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg  716 (871)
                      +||||+++++|..+.+          .+++..++.++.||+.||+|||++   |||||||||+|||++.++ .+||+|||
T Consensus       109 ~v~e~~~~~~L~~~~~----------~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG  175 (328)
T d3bqca1         109 LVFEHVNNTDFKQLYQ----------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWG  175 (328)
T ss_dssp             EEEECCCSCBGGGTTT----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGG
T ss_pred             EEEeecCCCcHHHHhc----------CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccc
Confidence            9999999999876642          489999999999999999999999   999999999999998655 69999999


Q ss_pred             cceecCCCCCCccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      +|.......    ......+|+.|+|||.+.+. .++.++||||+||++|+|++|+.||...................+.
T Consensus       176 ~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~  251 (328)
T d3bqca1         176 LAEFYHPGQ----EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED  251 (328)
T ss_dssp             GCEECCTTC----CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHH
T ss_pred             cceeccCCC----cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCch
Confidence            998775432    22345689999999987654 5799999999999999999999999754322211111111000000


Q ss_pred             hhhhc---ChhHHHHHHHHHhh----hhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          796 VAEII---DPAILEEALEIQAG----IVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       796 ~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      .....   .......+......    ......  .......+..++.+++.+||..||++||||+|+++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         252 LYDYIDKYNIELDPRFNDILGRHSRKRWERFV--HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             HHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGC--CTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhcccccCcccchhcccccccchhhcc--cccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00000   00000000000000    000000  00111223456789999999999999999999986


No 58 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.8e-43  Score=370.97  Aligned_cols=278  Identities=20%  Similarity=0.213  Sum_probs=206.3

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCcee
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEFK  636 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  636 (871)
                      ++|++++.||+|+||+||+|++..+++.||||+++...  .....++.+|+.+++.++||||+++++++.+.     ...
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~-----~~~   76 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-----KKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----SEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccc-----cce
Confidence            58999999999999999999999999999999996443  33457889999999999999999999998776     678


Q ss_pred             eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 002883          637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDFG  716 (871)
Q Consensus       637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  716 (871)
                      ++|+|++.++++..++...+       .+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||
T Consensus        77 ~iv~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG  146 (292)
T d1unla_          77 TLVFEFCDQDLKKYFDSCNG-------DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFG  146 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTTT-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred             eEEeeecccccccccccccc-------ccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecc
Confidence            99999999999988887654       589999999999999999999999   99999999999999999999999999


Q ss_pred             cceecCCCCCCccccccccccccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCCCch
Q 002883          717 LSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGE-VSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGLPDQ  795 (871)
Q Consensus       717 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  795 (871)
                      .|+......   .......+++.|+|||.+.... ++.++||||+||++|||++|+.||....+.............+..
T Consensus       147 ~a~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (292)
T d1unla_         147 LARAFGIPV---RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT  223 (292)
T ss_dssp             TCEECCSCC---SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             hhhcccCCC---ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCC
Confidence            998875432   1222345788999999876654 689999999999999999999997544333222222221111100


Q ss_pred             hhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          796 VAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      ...+..........   .....................+.+++.+||+.||++||||+|+++
T Consensus       224 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         224 EEQWPSMTKLPDYK---PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TTTCTTGGGSTTCC---CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhhhhhhccccc---ccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00000000000000   000000000111111223446778999999999999999999986


No 59 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.7e-43  Score=378.52  Aligned_cols=280  Identities=19%  Similarity=0.199  Sum_probs=205.3

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCccceeeeeecccCcCCCce
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ--RGASKSFIAECEALRSIRHRNLVKIITSCSSIDTRGNEF  635 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  635 (871)
                      .++|++.+.||+|+||+||+|++..+++.||||+++...  ....+.+.+|++++++++|||++++++++..........
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            468999999999999999999999999999999996443  234467889999999999999999999987654433344


Q ss_pred             eeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 002883          636 KALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMVAHVGDF  715 (871)
Q Consensus       636 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  715 (871)
                      .+++|+|+.+|+|.+++...        .+++.+++.++.||+.||+|||++   ||+||||||+||+++.++.+|++||
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~--------~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~df  165 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQ--------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF  165 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTC--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             eEEEEEeecCCchhhhcccc--------cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCcccccccccccccccc
Confidence            56667778899999999643        499999999999999999999999   9999999999999999999999999


Q ss_pred             ccceecCCCCCCccccccccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHHhhhCC-C
Q 002883          716 GLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG-EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKYAKMGL-P  793 (871)
Q Consensus       716 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~~~~~~-~  793 (871)
                      |.|....      .......|++.|+|||...+. .++.++||||+||++|+|++|+.||.................. +
T Consensus       166 g~a~~~~------~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~  239 (348)
T d2gfsa1         166 GLARHTD------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG  239 (348)
T ss_dssp             ----CCT------GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             chhcccC------cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            9997643      223345689999999986655 4689999999999999999999999754333222111111111 1


Q ss_pred             chhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHH
Q 002883          794 DQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIM  857 (871)
Q Consensus       794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~  857 (871)
                      ...............   ...............+......+.+++.+||+.||++||||+|+++
T Consensus       240 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         240 AELLKKISSESARNY---IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHHHTTCCCHHHHHH---HTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hHHhhhccchhhhhh---hhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            112111111111111   1111111111222222344567889999999999999999999986


No 60 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=2.8e-42  Score=362.33  Aligned_cols=263  Identities=16%  Similarity=0.191  Sum_probs=207.2

Q ss_pred             hcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCC-CccceeeeeecccCcCCCcee
Q 002883          558 TEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRH-RNLVKIITSCSSIDTRGNEFK  636 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~~  636 (871)
                      .++|++.+.||+|+||+||+|++..+++.||||+++....  .+.+.+|+++++.+.| +|++.+++++.+.     ...
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-----~~~   76 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEG-----LHN   76 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEET-----TEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecC-----Ccc
Confidence            3689999999999999999999999999999999854332  3457789999999965 8999999887654     678


Q ss_pred             eEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-----CCceE
Q 002883          637 ALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDN-----EMVAH  711 (871)
Q Consensus       637 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-----~~~~k  711 (871)
                      ++||||+ +++|.+++.....      .+++..+..++.|++.||+|||+.   ||+||||||+||+++.     ++.+|
T Consensus        77 ~~vme~~-~~~l~~~~~~~~~------~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vk  146 (293)
T d1csna_          77 VLVIDLL-GPSLEDLLDLCGR------KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIY  146 (293)
T ss_dssp             EEEEECC-CCBHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEE
T ss_pred             EEEEEec-CCCHHHHHHhhcc------chhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceE
Confidence            9999999 7899999876542      589999999999999999999999   9999999999999964     57899


Q ss_pred             EeecccceecCCCCCCc----cccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhhhhhh--HH
Q 002883          712 VGDFGLSRLLHDNSPDQ----TSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLS--LH  785 (871)
Q Consensus       712 l~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~--~~  785 (871)
                      |+|||+|+...+.....    .......||+.|||||++.+..+++++|||||||++|||+||+.||.........  ..
T Consensus       147 l~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~  226 (293)
T d1csna_         147 VVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYE  226 (293)
T ss_dssp             ECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHH
T ss_pred             EcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHH
Confidence            99999999876432221    1233457999999999999999999999999999999999999999743221110  00


Q ss_pred             HHhhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCCCHHHHHHHHHHHHH
Q 002883          786 KYAKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRMKIQDAIMELQEAQK  864 (871)
Q Consensus       786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPta~evl~~L~~i~~  864 (871)
                      ......                           ..+........+++++.+++..|+..+|++||+++.+.+.++++.+
T Consensus       227 ~i~~~~---------------------------~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         227 RIGEKK---------------------------QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             HHHHHH---------------------------HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHhcc---------------------------CCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHH
Confidence            000000                           0000011112344568889999999999999999999999888754


No 61 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-42  Score=367.58  Aligned_cols=252  Identities=23%  Similarity=0.280  Sum_probs=199.4

Q ss_pred             hcCCCCCceeeccccceEEEEEE---CCCCcEEEEEEeecc----ccchHHHHHHHHHHHHcCCC-CccceeeeeecccC
Q 002883          558 TEGFSSANLIGIGGYGYVYKGIL---GTEETNVAVKVLDLQ----QRGASKSFIAECEALRSIRH-RNLVKIITSCSSID  629 (871)
Q Consensus       558 ~~~y~~~~~lg~G~~g~V~~~~~---~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~  629 (871)
                      .++|++.+.||+|+||+||+|++   +.+|+.||||+++..    .....+.+.+|++++++++| |||+++++++.+. 
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~-  101 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE-  101 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET-
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC-
Confidence            36799999999999999999987   346899999998532    22234678899999999966 8999999998776 


Q ss_pred             cCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc
Q 002883          630 TRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNVLLDNEMV  709 (871)
Q Consensus       630 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~  709 (871)
                          ...++||||+.+|+|.+++....       .+++..+..++.||+.|++|+|+.   +||||||||+||+++.++.
T Consensus       102 ----~~~~~v~e~~~~~~L~~~i~~~~-------~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~  167 (322)
T d1vzoa_         102 ----TKLHLILDYINGGELFTHLSQRE-------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGH  167 (322)
T ss_dssp             ----TEEEEEECCCCSCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSC
T ss_pred             ----CceeeeeecccccHHHHHHHhcc-------cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCC
Confidence                67899999999999999998765       578899999999999999999999   9999999999999999999


Q ss_pred             eEEeecccceecCCCCCCccccccccccccccCcccccCC--CCCCccchhhHHHHHHHHHhCCCCCchhhhhhhhHHHH
Q 002883          710 AHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALG--EVSTHGDEYSFGILMLEMFTGKRPTDDMFEEGLSLHKY  787 (871)
Q Consensus       710 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~~~~~~  787 (871)
                      +||+|||+|+.+....  ........|++.|+|||.+.+.  .++.++||||+||++|+|++|+.||.............
T Consensus       168 vkL~DFG~a~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~  245 (322)
T d1vzoa_         168 VVLTDFGLSKEFVADE--TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS  245 (322)
T ss_dssp             EEESCSSEEEECCGGG--GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH
T ss_pred             EEEeeccchhhhcccc--cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            9999999998765332  2223446799999999987654  46889999999999999999999997543221111100


Q ss_pred             --hhhCCCchhhhhcChhHHHHHHHHHhhhhhhcCchhHHhHHHHHHHHHhhhcccccCCCCCCC-----CHHHHHH
Q 002883          788 --AKMGLPDQVAEIIDPAILEEALEIQAGIVKELQPNLRAKFHEIQVSILRVGILCSEELPRDRM-----KIQDAIM  857 (871)
Q Consensus       788 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----ta~evl~  857 (871)
                        .....+ ..                              ......++.+++.+||++||++||     ||+|+++
T Consensus       246 ~~~~~~~~-~~------------------------------~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         246 RRILKSEP-PY------------------------------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             HHHHHCCC-CC------------------------------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HhcccCCC-CC------------------------------cccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence              000000 00                              012345678999999999999999     4888876


No 62 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=3.8e-37  Score=335.40  Aligned_cols=278  Identities=17%  Similarity=0.178  Sum_probs=190.5

Q ss_pred             cCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-----------CCccceeeeeecc
Q 002883          559 EGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-----------HRNLVKIITSCSS  627 (871)
Q Consensus       559 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~~  627 (871)
                      +||+++++||+|+||+||+|++..+|+.||||+++.... ..+.+.+|+++++.++           |+||+++++++..
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            469999999999999999999999999999999975432 3467788999888774           5789999988755


Q ss_pred             cCcCCCceeeEEEeccCCCCH-HHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeEecCCCCCceeeC
Q 002883          628 IDTRGNEFKALVYEFMPNGSL-ENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHH-HCHTSIVHCDLKPSNVLLD  705 (871)
Q Consensus       628 ~~~~~~~~~~lv~e~~~~gsL-~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~Nill~  705 (871)
                      ...   ...+++|+++..+.. ........     ...+++..++.++.||+.|++|||+ .   ||+||||||+|||++
T Consensus        92 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~  160 (362)
T d1q8ya_          92 KGP---NGVHVVMVFEVLGENLLALIKKYE-----HRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLME  160 (362)
T ss_dssp             EET---TEEEEEEEECCCCEEHHHHHHHTT-----TSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEE
T ss_pred             ccc---cceeeeeeeccccccccccccccc-----ccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeee
Confidence            322   345566666544433 33332222     2368999999999999999999998 6   999999999999997


Q ss_pred             CCC------ceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCchhhh
Q 002883          706 NEM------VAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILMLEMFTGKRPTDDMFE  779 (871)
Q Consensus       706 ~~~------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~  779 (871)
                      .++      .++++|||.|.....      ......||+.|+|||+.....++.++||||+||++++|++|+.||.....
T Consensus       161 ~~~~~~~~~~~kl~dfg~s~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~  234 (362)
T d1q8ya_         161 IVDSPENLIQIKIADLGNACWYDE------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEG  234 (362)
T ss_dssp             EEETTTTEEEEEECCCTTCEETTB------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             ccCcccccceeeEeeccccccccc------ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCcc
Confidence            655      499999999986532      22345699999999999999999999999999999999999999975322


Q ss_pred             h-----hhhHHHHhh--hCCCchhhhhcChhHHHHHHHHHhhhh---hhcC--------chhHHhHHHHHHHHHhhhccc
Q 002883          780 E-----GLSLHKYAK--MGLPDQVAEIIDPAILEEALEIQAGIV---KELQ--------PNLRAKFHEIQVSILRVGILC  841 (871)
Q Consensus       780 ~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~~l~~li~~c  841 (871)
                      .     .........  ...+..........  ..... .....   ....        +...........++.+++.+|
T Consensus       235 ~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~m  311 (362)
T d1q8ya_         235 HSYTKDDDHIAQIIELLGELPSYLLRNGKYT--RTFFN-SRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPM  311 (362)
T ss_dssp             ----CHHHHHHHHHHHHCSCCHHHHHHCTTH--HHHBC-C--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGG
T ss_pred             ccccchhHHHHHHHHHhCCCCHHHhhccccc--ccccc-cchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHH
Confidence            1     011111111  11111110000000  00000 00000   0000        000111235667889999999


Q ss_pred             ccCCCCCCCCHHHHHH
Q 002883          842 SEELPRDRMKIQDAIM  857 (871)
Q Consensus       842 l~~dP~~RPta~evl~  857 (871)
                      |++||++||||+|+++
T Consensus       312 L~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         312 LQLDPRKRADAGGLVN  327 (362)
T ss_dssp             GCSSTTTCBCHHHHHT
T ss_pred             CCCChhHCcCHHHHhc
Confidence            9999999999999986


No 63 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.97  E-value=2.6e-31  Score=282.65  Aligned_cols=255  Identities=29%  Similarity=0.473  Sum_probs=221.1

Q ss_pred             cccEEEccCCccCC--CCCCCCCCccccceeeccc-ccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEE
Q 002883          225 HLIYLYMSANRISG--TIPTGVGNLKNLILIAMEV-NLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEV  301 (871)
Q Consensus       225 ~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L  301 (871)
                      +++.|+|++|.+++  .+|..+++|++|++|+|++ |.+++.+|..|+++++|++|+|++|++.+..+..+..+.+|+.+
T Consensus        51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l  130 (313)
T d1ogqa_          51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL  130 (313)
T ss_dssp             CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred             EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence            46677777777765  3677888888888888876 77887888888888889999999988888788888888889999


Q ss_pred             EccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCC-cEEeccCCCCCCCCccccCCCCCCCEEeCCCCcC
Q 002883          302 DLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSF-VLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKL  380 (871)
Q Consensus       302 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l  380 (871)
                      ++++|.+.+.+|..+.++++|+.+++++|.+.+.+|..+..+.++ +.+++++|++++..|..+..+..+ .+++++|..
T Consensus       131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~  209 (313)
T d1ogqa_         131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNML  209 (313)
T ss_dssp             ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEE
T ss_pred             ccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence            999998888888889999999999999999988888888888776 788999999988888888777554 799999999


Q ss_pred             CCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCCCCc
Q 002883          381 SGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVPSEG  460 (871)
Q Consensus       381 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~  460 (871)
                      .+.+|..+..+++|+.+++++|.+.+.++ .+..+++|+.|+|++|++++.+|..+..+++|++|+|++|+|+|.+|..+
T Consensus       210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~  288 (313)
T d1ogqa_         210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG  288 (313)
T ss_dssp             EECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred             ccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcc
Confidence            98899999999999999999999986554 68889999999999999999999999999999999999999999999877


Q ss_pred             ccccccceeccCCCCCccCCC
Q 002883          461 VFKNVRAVSIIGNNKLCGGSP  481 (871)
Q Consensus       461 ~~~~l~~l~l~~N~~~C~~~~  481 (871)
                      .+.+++.+++.+|+..||.|.
T Consensus       289 ~L~~L~~l~l~~N~~l~g~pl  309 (313)
T d1ogqa_         289 NLQRFDVSAYANNKCLCGSPL  309 (313)
T ss_dssp             TGGGSCGGGTCSSSEEESTTS
T ss_pred             cCCCCCHHHhCCCccccCCCC
Confidence            888999999999999999875


No 64 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.97  E-value=2.9e-29  Score=275.36  Aligned_cols=206  Identities=28%  Similarity=0.387  Sum_probs=128.2

Q ss_pred             cEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCc
Q 002883          227 IYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGN  306 (871)
Q Consensus       227 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N  306 (871)
                      .......|...  ....+..+++++.+++++|.+++..|  +...++|++|++++|+++. + +.+..+++|+.|++++|
T Consensus       178 ~~~~~~~~~~~--~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n  251 (384)
T d2omza2         178 ERLDISSNKVS--DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANN  251 (384)
T ss_dssp             CEEECCSSCCC--CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSS
T ss_pred             ccccccccccc--cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccC
Confidence            33444444332  33445555666666666666664332  3445666677777776662 2 34566666777777777


Q ss_pred             cccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCcc
Q 002883          307 SIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPT  386 (871)
Q Consensus       307 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~  386 (871)
                      ++++..+  +..+++|+.|++++|++++..  .+..++.++.+++++|.+.+  ...+..+++++.|++++|++++..  
T Consensus       252 ~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~--  323 (384)
T d2omza2         252 QISNLAP--LSGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--  323 (384)
T ss_dssp             CCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCG--
T ss_pred             ccCCCCc--ccccccCCEeeccCcccCCCC--cccccccccccccccccccc--ccccchhcccCeEECCCCCCCCCc--
Confidence            7664332  566677777777777776332  35666677777777777763  234666777777777777776432  


Q ss_pred             chhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCC
Q 002883          387 SLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFN  450 (871)
Q Consensus       387 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N  450 (871)
                      .+..+++|++|++++|+|+++ + .+.++++|++|++++|++++..|  +..+++|+.|+|++|
T Consensus       324 ~l~~l~~L~~L~L~~n~l~~l-~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N  383 (384)
T d2omza2         324 PVSSLTKLQRLFFANNKVSDV-S-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ  383 (384)
T ss_dssp             GGGGCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred             ccccCCCCCEEECCCCCCCCC-h-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence            266677777777777777643 2 46777777777777777775443  667777777777776


No 65 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.97  E-value=4.8e-29  Score=273.54  Aligned_cols=356  Identities=26%  Similarity=0.304  Sum_probs=234.5

Q ss_pred             ecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCcccccccccccccccccccc
Q 002883           20 DLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSANYLT   99 (871)
Q Consensus        20 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~   99 (871)
                      +++.+.+++.+.  ...+.+|++|+++++.|+. + +.+..|++|++|+|++|+|+ .+| .|++|++|++|++++|+++
T Consensus        28 ~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~-~l~-~l~~L~~L~~L~L~~n~i~  101 (384)
T d2omza2          28 VLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLT-DIT-PLKNLTKLVDILMNNNQIA  101 (384)
T ss_dssp             HTTCSSTTSEEC--HHHHTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCC-CCG-GGTTCTTCCEEECCSSCCC
T ss_pred             HhCCCCCCCccC--HHHhCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCC-CCc-cccCCcccccccccccccc
Confidence            455555554332  2455666777777777663 3 34666777777777777776 344 2667777777777777776


Q ss_pred             CCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEEecccc
Q 002883          100 GSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRLNFARN  179 (871)
Q Consensus       100 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L~l~~n  179 (871)
                      + ++ .+.++++|+.|++++|.+.+. +...  ....+..+....|.+....+..          ...............
T Consensus       102 ~-i~-~l~~l~~L~~L~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~  166 (384)
T d2omza2         102 D-IT-PLANLTNLTGLTLFNNQITDI-DPLK--NLTNLNRLELSSNTISDISALS----------GLTSLQQLSFGNQVT  166 (384)
T ss_dssp             C-CG-GGTTCTTCCEEECCSSCCCCC-GGGT--TCTTCSEEEEEEEEECCCGGGT----------TCTTCSEEEEEESCC
T ss_pred             c-cc-ccccccccccccccccccccc-cccc--cccccccccccccccccccccc----------ccccccccccccccc
Confidence            3 22 266677777777776666532 2221  3455666666666654211110          111111111111111


Q ss_pred             cCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeeccccc
Q 002883          180 NLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNL  259 (871)
Q Consensus       180 ~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~  259 (871)
                      .           ...+...+.........|...  .......+ +++..+++++|.+++..|  +...++|+.|++++|.
T Consensus       167 ~-----------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l-~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~  230 (384)
T d2omza2         167 D-----------LKPLANLTTLERLDISSNKVS--DISVLAKL-TNLESLIATNNQISDITP--LGILTNLDELSLNGNQ  230 (384)
T ss_dssp             C-----------CGGGTTCTTCCEEECCSSCCC--CCGGGGGC-TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred             h-----------hhhhccccccccccccccccc--cccccccc-cccceeeccCCccCCCCc--ccccCCCCEEECCCCC
Confidence            1           123334445555556665554  23344444 457778888887775443  4566778888888888


Q ss_pred             ccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCccc
Q 002883          260 LTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPRE  339 (871)
Q Consensus       260 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~  339 (871)
                      ++.  +..+..+++|+.|++++|++++..  .+..+++|++|++++|++++..  .+..++.++.+++++|.+++ + ..
T Consensus       231 l~~--~~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~-~-~~  302 (384)
T d2omza2         231 LKD--IGTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLED-I-SP  302 (384)
T ss_dssp             CCC--CGGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC-C-GG
T ss_pred             CCC--cchhhcccccchhccccCccCCCC--cccccccCCEeeccCcccCCCC--cccccccccccccccccccc-c-cc
Confidence            774  346778888888888888887433  3778888899999888887543  37778888999999998874 2 35


Q ss_pred             ccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCC
Q 002883          340 VIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQ  419 (871)
Q Consensus       340 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~  419 (871)
                      +..+++++.|++++|++++..  .+..+++|++|++++|+|++ ++ .+..+++|++|++++|+|++..|  +.++++|+
T Consensus       303 ~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~  376 (384)
T d2omza2         303 ISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRIT  376 (384)
T ss_dssp             GGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCS
T ss_pred             cchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCC
Confidence            778888999999999998543  37888999999999999983 44 58889999999999999987654  88899999


Q ss_pred             EEeCCCC
Q 002883          420 DLDLSRN  426 (871)
Q Consensus       420 ~L~l~~N  426 (871)
                      .|+|++|
T Consensus       377 ~L~L~~N  383 (384)
T d2omza2         377 QLGLNDQ  383 (384)
T ss_dssp             EEECCCE
T ss_pred             EeeCCCC
Confidence            9999987


No 66 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.96  E-value=1.4e-29  Score=269.24  Aligned_cols=252  Identities=29%  Similarity=0.477  Sum_probs=217.9

Q ss_pred             cccEEEccCCcCcc--cCChhhhhccccccEEEccC-CccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcE
Q 002883          200 FLEVVSLSSNSLSG--VLPNSIANFSSHLIYLYMSA-NRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQV  276 (871)
Q Consensus       200 ~L~~L~L~~n~l~~--~~~~~~~~~~~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~  276 (871)
                      +++.|+|++|.+++  .+|..+.++ ++|++|+|++ |++++.+|..|++|++|++|+|++|++.+..+..+..+.+|+.
T Consensus        51 ~v~~L~L~~~~l~g~~~lp~~l~~L-~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~  129 (313)
T d1ogqa_          51 RVNNLDLSGLNLPKPYPIPSSLANL-PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT  129 (313)
T ss_dssp             CEEEEEEECCCCSSCEECCGGGGGC-TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred             EEEEEECCCCCCCCCCCCChHHhcC-ccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence            57788888888876  478888887 4699999986 7888888888999999999999999999888888888999999


Q ss_pred             EEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCC-CEEecCCCcCCCCCcccccCCCCCcEEeccCCC
Q 002883          277 LSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQL-QKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNH  355 (871)
Q Consensus       277 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~  355 (871)
                      +++++|.+...+|..+..+++|+.+++++|.+.+.+|..+..+.++ +.+++++|++++..|..+..+..+ .+++++|.
T Consensus       130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~  208 (313)
T d1ogqa_         130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNM  208 (313)
T ss_dssp             EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSE
T ss_pred             cccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence            9999999888888899999999999999999988888888888776 889999999998888888777655 69999999


Q ss_pred             CCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCccc
Q 002883          356 LSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMF  435 (871)
Q Consensus       356 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~  435 (871)
                      +.+.+|..+..+++|+.+++++|.+++.+ ..+..+++|+.|+|++|++++.+|..|.++++|++|||++|+|+|.+|. 
T Consensus       209 ~~~~~~~~~~~~~~l~~l~~~~~~l~~~~-~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-  286 (313)
T d1ogqa_         209 LEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-  286 (313)
T ss_dssp             EEECCGGGCCTTSCCSEEECCSSEECCBG-GGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-
T ss_pred             ccccccccccccccccccccccccccccc-cccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-
Confidence            88888888999999999999999998654 4688889999999999999988999999999999999999999988884 


Q ss_pred             ccccccccEEecCCCcC-ccc
Q 002883          436 LNTFRFLQKLNLSFNNL-EGE  455 (871)
Q Consensus       436 ~~~~~~L~~L~l~~N~l-~~~  455 (871)
                      +..+.+|+.+++++|+. +|.
T Consensus       287 ~~~L~~L~~l~l~~N~~l~g~  307 (313)
T d1ogqa_         287 GGNLQRFDVSAYANNKCLCGS  307 (313)
T ss_dssp             STTGGGSCGGGTCSSSEEEST
T ss_pred             cccCCCCCHHHhCCCccccCC
Confidence            57889999999999984 443


No 67 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95  E-value=3.7e-27  Score=246.35  Aligned_cols=253  Identities=21%  Similarity=0.223  Sum_probs=166.3

Q ss_pred             EEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccCC
Q 002883          203 VVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGN  282 (871)
Q Consensus       203 ~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n  282 (871)
                      .++++++.++ .+|..+.   +.+++|+|++|+|+.+.+..|.                        ++++|++|++++|
T Consensus        15 ~v~c~~~~L~-~iP~~ip---~~~~~L~Ls~N~i~~i~~~~f~------------------------~l~~L~~L~ls~n   66 (284)
T d1ozna_          15 TTSCPQQGLQ-AVPVGIP---AASQRIFLHGNRISHVPAASFR------------------------ACRNLTILWLHSN   66 (284)
T ss_dssp             EEECCSSCCS-SCCTTCC---TTCSEEECTTSCCCEECTTTTT------------------------TCTTCCEEECCSS
T ss_pred             EEEcCCCCCC-ccCCCCC---CCCCEEECcCCcCCCCCHHHhh------------------------ccccccccccccc
Confidence            4556666665 4454432   3455666666666544444444                        4455555555555


Q ss_pred             CCCCCCCcccCCCccccEEEc-cCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCc
Q 002883          283 KISGEIPSSLGNLIFLTEVDL-QGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIP  361 (871)
Q Consensus       283 ~l~~~~~~~~~~l~~L~~L~L-~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~  361 (871)
                      ++....+..+..+..++.++. ..|.++...+..|.++++|++|++++|.+....+..+...++|+.+++++|.+++..+
T Consensus        67 ~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~  146 (284)
T d1ozna_          67 VLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPD  146 (284)
T ss_dssp             CCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred             cccccccccccccccccccccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccCh
Confidence            555444444555555555543 2444554445556666666666666666655555556666666666666666665555


Q ss_pred             cccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCccccccccc
Q 002883          362 LEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRF  441 (871)
Q Consensus       362 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~  441 (871)
                      ..|..+++|+.|++++|++++..+..|.++++|+.+++++|+++++.|..|.++++|++||+++|++++..+..|..+++
T Consensus       147 ~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~  226 (284)
T d1ozna_         147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA  226 (284)
T ss_dssp             TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred             hHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccc
Confidence            66777777777777777777667777778888888888888888777888888888888888888888777778888888


Q ss_pred             ccEEecCCCcCcccCCCCcccccccceeccCCCCCccCCCcc
Q 002883          442 LQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGGSPEL  483 (871)
Q Consensus       442 L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~~~~~  483 (871)
                      |++|++++|+|.|.++..+....++.+....+...|..|.++
T Consensus       227 L~~L~l~~N~l~C~C~~~~l~~~l~~~~~~~~~~~C~~p~~l  268 (284)
T d1ozna_         227 LQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRL  268 (284)
T ss_dssp             CCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGG
T ss_pred             cCEEEecCCCCCCCccchHHHHHHHhCcCCCCceEeCCchHH
Confidence            888888888888877654444456666666677777766554


No 68 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.94  E-value=2.2e-26  Score=243.28  Aligned_cols=268  Identities=21%  Similarity=0.278  Sum_probs=153.1

Q ss_pred             CCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccc
Q 002883           15 ELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVS   94 (871)
Q Consensus        15 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~   94 (871)
                      +.+.+|-++++++ .+|..+.  +++++|+|++|+|+...+.+|.++++|++|++++|.++...|..|.++++|++|+++
T Consensus        11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~   87 (305)
T d1xkua_          11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS   87 (305)
T ss_dssp             ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred             cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence            4677888888888 6777663  578888888888885555578888888888888888886667778888888888888


Q ss_pred             cccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEE
Q 002883           95 ANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRL  174 (871)
Q Consensus        95 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L  174 (871)
                      +|+++ .+|..+  ...++.|.+..|.+. .++...+.....++.++...|...                          
T Consensus        88 ~n~l~-~l~~~~--~~~l~~L~~~~n~l~-~l~~~~~~~~~~~~~l~~~~n~~~--------------------------  137 (305)
T d1xkua_          88 KNQLK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLK--------------------------  137 (305)
T ss_dssp             SSCCS-BCCSSC--CTTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCC--------------------------
T ss_pred             CCccC-cCccch--hhhhhhhhccccchh-hhhhhhhhcccccccccccccccc--------------------------
Confidence            88887 444432  234555555555554 334333334444444554444332                          


Q ss_pred             ecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceee
Q 002883          175 NFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIA  254 (871)
Q Consensus       175 ~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~  254 (871)
                              ....    ....+..+++|+.+++++|.++ .+|..+   .++|++|++++|.++...+..|.+++.++.|+
T Consensus       138 --------~~~~----~~~~~~~l~~L~~l~l~~n~l~-~l~~~~---~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~  201 (305)
T d1xkua_         138 --------SSGI----ENGAFQGMKKLSYIRIADTNIT-TIPQGL---PPSLTELHLDGNKITKVDAASLKGLNNLAKLG  201 (305)
T ss_dssp             --------GGGB----CTTGGGGCTTCCEEECCSSCCC-SCCSSC---CTTCSEEECTTSCCCEECTGGGTTCTTCCEEE
T ss_pred             --------ccCC----CccccccccccCccccccCCcc-ccCccc---CCccCEEECCCCcCCCCChhHhhccccccccc
Confidence                    1110    1122334444555555555444 233322   13455555555555555555555555555555


Q ss_pred             cccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccc------cCCCCCCEEecC
Q 002883          255 MEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSAL------GNCLQLQKLDLS  328 (871)
Q Consensus       255 l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~------~~l~~L~~L~L~  328 (871)
                      +++|.+++..+..|.++++|++|+|++|+|+ .+|..|..+++|+.|+|++|+|+.+....|      ..+.+|+.|+|+
T Consensus       202 ~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~  280 (305)
T d1xkua_         202 LSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLF  280 (305)
T ss_dssp             CCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECC
T ss_pred             cccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECC
Confidence            5555555555555555555555555555555 344455555555555555555553322222      223444555555


Q ss_pred             CCcC
Q 002883          329 DNNL  332 (871)
Q Consensus       329 ~N~l  332 (871)
                      +|.+
T Consensus       281 ~N~~  284 (305)
T d1xkua_         281 SNPV  284 (305)
T ss_dssp             SSSS
T ss_pred             CCcC
Confidence            5544


No 69 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.94  E-value=6.7e-26  Score=239.56  Aligned_cols=243  Identities=24%  Similarity=0.290  Sum_probs=110.8

Q ss_pred             cccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccc
Q 002883          170 NLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKN  249 (871)
Q Consensus       170 ~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~  249 (871)
                      .++.++.++++++++|.+       +.  +++++|+|++|+|+...+..+..+ ++|++|++++|.+....|..|.++++
T Consensus        11 ~~~~~~C~~~~L~~lP~~-------l~--~~l~~L~Ls~N~i~~l~~~~f~~l-~~L~~L~l~~n~~~~i~~~~f~~l~~   80 (305)
T d1xkua_          11 HLRVVQCSDLGLEKVPKD-------LP--PDTALLDLQNNKITEIKDGDFKNL-KNLHTLILINNKISKISPGAFAPLVK   80 (305)
T ss_dssp             ETTEEECTTSCCCSCCCS-------CC--TTCCEEECCSSCCCCBCTTTTTTC-TTCCEEECCSSCCCCBCTTTTTTCTT
T ss_pred             cCCEEEecCCCCCccCCC-------CC--CCCCEEECcCCcCCCcChhHhhcc-ccccccccccccccccchhhhhCCCc
Confidence            344455555555554321       10  245555555555542222233333 24555555555555444444555555


Q ss_pred             cceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCcccc--ccCcccccCCCCCCEEec
Q 002883          250 LILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIR--GSIPSALGNCLQLQKLDL  327 (871)
Q Consensus       250 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~L  327 (871)
                      |+.|++++|+++. +|..+  ...++.|++++|.+....+..+.....+..++...|...  ...+..|..+++|+.+++
T Consensus        81 L~~L~l~~n~l~~-l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l  157 (305)
T d1xkua_          81 LERLYLSKNQLKE-LPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRI  157 (305)
T ss_dssp             CCEEECCSSCCSB-CCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEEC
T ss_pred             cCEecccCCccCc-Cccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCcccc
Confidence            5555555555542 22221  234455555555554333333444444444444444322  122333444445555555


Q ss_pred             CCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCccccc
Q 002883          328 SDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGP  407 (871)
Q Consensus       328 ~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~  407 (871)
                      ++|.++ .+|..+  .++|+.|++++|.++...+..+..++.++.|++++|.+++..+..|.++++|++|+|++|+|+. 
T Consensus       158 ~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~-  233 (305)
T d1xkua_         158 ADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-  233 (305)
T ss_dssp             CSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSS-
T ss_pred             ccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccccc-
Confidence            555544 222222  2445555555555444444444445555555555555544444444445555555555555542 


Q ss_pred             CccccCCCCCCCEEeCCCCcCC
Q 002883          408 IHSGFSSLKGLQDLDLSRNNFS  429 (871)
Q Consensus       408 ~~~~~~~l~~L~~L~l~~N~l~  429 (871)
                      +|..|..+++|++|+|++|+|+
T Consensus       234 lp~~l~~l~~L~~L~Ls~N~i~  255 (305)
T d1xkua_         234 VPGGLADHKYIQVVYLHNNNIS  255 (305)
T ss_dssp             CCTTTTTCSSCCEEECCSSCCC
T ss_pred             cccccccccCCCEEECCCCccC
Confidence            2334444555555555555554


No 70 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94  E-value=2e-26  Score=240.78  Aligned_cols=224  Identities=22%  Similarity=0.213  Sum_probs=157.4

Q ss_pred             cEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccc
Q 002883          172 IRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLI  251 (871)
Q Consensus       172 ~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~  251 (871)
                      ..++.++++++++|..       +.  +++++|+|++|+|+...+..+..+ ++|++|++++|+|..+.+..+.++..++
T Consensus        14 ~~v~c~~~~L~~iP~~-------ip--~~~~~L~Ls~N~i~~i~~~~f~~l-~~L~~L~ls~n~l~~i~~~~~~~~~~~~   83 (284)
T d1ozna_          14 VTTSCPQQGLQAVPVG-------IP--AASQRIFLHGNRISHVPAASFRAC-RNLTILWLHSNVLARIDAAAFTGLALLE   83 (284)
T ss_dssp             CEEECCSSCCSSCCTT-------CC--TTCSEEECTTSCCCEECTTTTTTC-TTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred             eEEEcCCCCCCccCCC-------CC--CCCCEEECcCCcCCCCCHHHhhcc-cccccccccccccccccccccccccccc
Confidence            4678899999887642       11  468999999999996555667766 5799999999999988888888888888


Q ss_pred             eeecc-cccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCC
Q 002883          252 LIAME-VNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDN  330 (871)
Q Consensus       252 ~L~l~-~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N  330 (871)
                      .+... .|.++...+..|+++++|++|++++|.+....+..+....+|+.+++++|+|+++.+..|..+++|+.|++++|
T Consensus        84 ~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N  163 (284)
T d1ozna_          84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN  163 (284)
T ss_dssp             EEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred             ccccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccC
Confidence            87654 56677666777777777888888777777556666677777777777777777666666666777777777777


Q ss_pred             cCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCccc
Q 002883          331 NLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQ  405 (871)
Q Consensus       331 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~  405 (871)
                      ++++..+..|.++++|+.+++++|++++..|..|..+++|++|++++|++.+..+..|..+++|++|+|++|++.
T Consensus       164 ~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~  238 (284)
T d1ozna_         164 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV  238 (284)
T ss_dssp             CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred             cccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence            776555566666666666666666666555556666666666666666665555555555555555555555554


No 71 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=3.4e-25  Score=228.59  Aligned_cols=206  Identities=23%  Similarity=0.217  Sum_probs=158.4

Q ss_pred             CCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCE
Q 002883          245 GNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQK  324 (871)
Q Consensus       245 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~  324 (871)
                      .+...+.+.+++++.++ .+|..+.  ++|++|+|++|+|++..+..|.++++|++|+|++|+|+. ++ .++.+++|+.
T Consensus         7 ~~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~   81 (266)
T d1p9ag_           7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGT   81 (266)
T ss_dssp             ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCE
T ss_pred             cccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-cccccccccc
Confidence            34556677788888888 4566553  578888888888886666778888888888888888873 33 3567888888


Q ss_pred             EecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcc
Q 002883          325 LDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSF  404 (871)
Q Consensus       325 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l  404 (871)
                      |+|++|+++ ..+..+.++++|+.|++++|.+....+..+..+.+++.|++++|.++...+..+..+++|+.|++++|+|
T Consensus        82 L~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l  160 (266)
T d1p9ag_          82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL  160 (266)
T ss_dssp             EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred             ccccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccc
Confidence            888888887 5566777888888888888888766677777788888888888888866667777778888888888888


Q ss_pred             cccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCC
Q 002883          405 QGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVP  457 (871)
Q Consensus       405 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~  457 (871)
                      ++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|.|.+.
T Consensus       161 ~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~CdC~  212 (266)
T d1p9ag_         161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE  212 (266)
T ss_dssp             SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred             cccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCCCcc
Confidence            8777777888888888888888887 566666677777777777777777653


No 72 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92  E-value=8.5e-25  Score=225.53  Aligned_cols=205  Identities=22%  Similarity=0.168  Sum_probs=131.2

Q ss_pred             CCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEE
Q 002883          270 YLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLL  349 (871)
Q Consensus       270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L  349 (871)
                      ....+.+++.+++.|+ .+|..+.  ++|++|+|++|+|++..+..|.++++|++|+|++|+|+ .++ .+..+++|+.|
T Consensus         8 ~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L   82 (266)
T d1p9ag_           8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTL   82 (266)
T ss_dssp             CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEE
T ss_pred             ccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccc-ccccccccccc
Confidence            3445556666666666 3454442  35666777777766555566666677777777777666 333 24566667777


Q ss_pred             eccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCC
Q 002883          350 DLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFS  429 (871)
Q Consensus       350 ~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~  429 (871)
                      +|++|+++ ..+..+..+++|+.|++++|.+.+..+..+..+.++++|++++|.++.+.+..+..+++|+.|++++|+|+
T Consensus        83 ~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~  161 (266)
T d1p9ag_          83 DLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT  161 (266)
T ss_dssp             ECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred             cccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccccc
Confidence            77777666 34556666667777777777666556666666666777777777766666666666667777777777776


Q ss_pred             CCCcccccccccccEEecCCCcCcccCCCCcccccccceeccCCCCCccCC
Q 002883          430 GKIPMFLNTFRFLQKLNLSFNNLEGEVPSEGVFKNVRAVSIIGNNKLCGGS  480 (871)
Q Consensus       430 ~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~C~~~  480 (871)
                      +..+..+..+++|++|+|++|+|+..++....+..++.+++.+|||.|+|.
T Consensus       162 ~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~~Np~~CdC~  212 (266)
T d1p9ag_         162 ELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCE  212 (266)
T ss_dssp             CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred             ccCccccccccccceeecccCCCcccChhHCCCCCCCEEEecCCCCCCCcc
Confidence            666666666667777777777766444434445566666677777777664


No 73 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.88  E-value=1e-20  Score=203.68  Aligned_cols=199  Identities=25%  Similarity=0.296  Sum_probs=101.9

Q ss_pred             CCCEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccc
Q 002883           15 ELRILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVS   94 (871)
Q Consensus        15 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~   94 (871)
                      +++.|||++|+++ .+|+.   +++|++|+|++|+|+ .+|+.+   .+|++|++++|+++ .+++.   .+.|++|+++
T Consensus        39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~  106 (353)
T d1jl5a_          39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGVS  106 (353)
T ss_dssp             TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEECC
T ss_pred             CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---cccccccccc
Confidence            4667777777776 45643   346666777777776 555543   35666666666665 33321   1235555555


Q ss_pred             cccccCCCCccccccCCCceeeeeccccccccccccccCCCCccEEEccCccCCCCCCccCcCCCCCCccccCCCcccEE
Q 002883           95 ANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPHYVGFTLPNIRVLLLGSNWFTGEIPPSISNASSIPEDLGKLKNLIRL  174 (871)
Q Consensus        95 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~p~~~~~~~~lp~~~~~l~~L~~L  174 (871)
                      +|.+. .+|. +..                         +++|+.|++++|.++           ..|.   ....+..+
T Consensus       107 ~n~l~-~lp~-~~~-------------------------l~~L~~L~l~~~~~~-----------~~~~---~~~~l~~l  145 (353)
T d1jl5a_         107 NNQLE-KLPE-LQN-------------------------SSFLKIIDVDNNSLK-----------KLPD---LPPSLEFI  145 (353)
T ss_dssp             SSCCS-SCCC-CTT-------------------------CTTCCEEECCSSCCS-----------CCCC---CCTTCCEE
T ss_pred             ccccc-cccc-hhh-------------------------hccceeecccccccc-----------cccc---ccccccch
Confidence            55555 3332 334                         445555555555443           1111   12334444


Q ss_pred             ecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceee
Q 002883          175 NFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIA  254 (871)
Q Consensus       175 ~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~  254 (871)
                      .+.++....        ...+..++.++.+++++|.+.. .+...    ...+.+..+++.+. .. ..+..++.|+.++
T Consensus       146 ~~~~~~~~~--------~~~l~~l~~l~~L~l~~n~~~~-~~~~~----~~~~~l~~~~~~~~-~~-~~~~~l~~L~~l~  210 (353)
T d1jl5a_         146 AAGNNQLEE--------LPELQNLPFLTAIYADNNSLKK-LPDLP----LSLESIVAGNNILE-EL-PELQNLPFLTTIY  210 (353)
T ss_dssp             ECCSSCCSS--------CCCCTTCTTCCEEECCSSCCSS-CCCCC----TTCCEEECCSSCCS-SC-CCCTTCTTCCEEE
T ss_pred             hhccccccc--------cccccccccceecccccccccc-ccccc----cccccccccccccc-cc-ccccccccccccc
Confidence            444443332        1234455666666666666652 22211    22455566655554 22 2345566666666


Q ss_pred             cccccccccCCccccCCCCCcEEEccCCCCC
Q 002883          255 MEVNLLTGSIPTSVGYLLKLQVLSLFGNKIS  285 (871)
Q Consensus       255 l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~  285 (871)
                      +++|.... .+.   ...++..+.+.+|.+.
T Consensus       211 l~~n~~~~-~~~---~~~~l~~~~~~~~~~~  237 (353)
T d1jl5a_         211 ADNNLLKT-LPD---LPPSLEALNVRDNYLT  237 (353)
T ss_dssp             CCSSCCSS-CCS---CCTTCCEEECCSSCCS
T ss_pred             cccccccc-ccc---cccccccccccccccc
Confidence            66665552 222   2345666666666655


No 74 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.87  E-value=3.1e-23  Score=201.93  Aligned_cols=170  Identities=19%  Similarity=0.132  Sum_probs=120.9

Q ss_pred             CCCCceeeccccceEEEEEECCCCcEEEEEEeecccc------------------chHHHHHHHHHHHHcCCCCccceee
Q 002883          561 FSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQR------------------GASKSFIAECEALRSIRHRNLVKII  622 (871)
Q Consensus       561 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~niv~~~  622 (871)
                      |.+.+.||+|+||+||+|++. +|+.||||+++....                  .......+|+..+.++.|.+++..+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~   80 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY   80 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence            356789999999999999986 789999998743211                  0123455788899999999999888


Q ss_pred             eeecccCcCCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCce
Q 002883          623 TSCSSIDTRGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDLKPSNV  702 (871)
Q Consensus       623 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Ni  702 (871)
                      ++.         ..+++|||+++..+.              .++...+..++.|++.|++|||+.   ||+||||||+||
T Consensus        81 ~~~---------~~~lvme~~~~~~~~--------------~l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NI  134 (191)
T d1zara2          81 AWE---------GNAVLMELIDAKELY--------------RVRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNV  134 (191)
T ss_dssp             EEE---------TTEEEEECCCCEEGG--------------GCCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred             Eec---------CCEEEEEeecccccc--------------chhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhhe
Confidence            652         137999999875432              244455678999999999999999   999999999999


Q ss_pred             eeCCCCceEEeecccceecCCCCCCccccccccccccccCcccccCCCCCCccchhhHHHHH
Q 002883          703 LLDNEMVAHVGDFGLSRLLHDNSPDQTSTSRVKGSIGYVAPEYGALGEVSTHGDEYSFGILM  764 (871)
Q Consensus       703 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  764 (871)
                      |++++ .++++|||.|.......... ....   .... -.|. ....|+.++|+||..-.+
T Consensus       135 Lv~~~-~~~liDFG~a~~~~~~~~~~-~l~r---d~~~-~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         135 LVSEE-GIWIIDFPQSVEVGEEGWRE-ILER---DVRN-IITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             EEETT-EEEECCCTTCEETTSTTHHH-HHHH---HHHH-HHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             eeeCC-CEEEEECCCcccCCCCCcHH-HHHH---HHHH-HHHH-HcCCCCCcccHHHHHHHH
Confidence            99865 58999999998654321100 0000   0000 0111 235678899999986443


No 75 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.87  E-value=3.8e-20  Score=199.21  Aligned_cols=221  Identities=28%  Similarity=0.378  Sum_probs=120.7

Q ss_pred             CCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcE
Q 002883          197 NCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQV  276 (871)
Q Consensus       197 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~  276 (871)
                      .+++|++|++++|.+.. .+...    ..+..+.+.++...  ....+..++.++.|++++|.+... +.   .....+.
T Consensus       118 ~l~~L~~L~l~~~~~~~-~~~~~----~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~~-~~---~~~~~~~  186 (353)
T d1jl5a_         118 NSSFLKIIDVDNNSLKK-LPDLP----PSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKL-PD---LPLSLES  186 (353)
T ss_dssp             TCTTCCEEECCSSCCSC-CCCCC----TTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSSC-CC---CCTTCCE
T ss_pred             hhccceeeccccccccc-ccccc----ccccchhhcccccc--ccccccccccceeccccccccccc-cc---ccccccc
Confidence            34445555555554442 12111    23555555555443  334455666666666666665522 21   1223455


Q ss_pred             EEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCC
Q 002883          277 LSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHL  356 (871)
Q Consensus       277 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l  356 (871)
                      +..+++.+. ..+ .+..++.|+.+++++|... ..+.   ...++..+.+.+|.+.. .+.   ....+...++..|.+
T Consensus       187 l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~-~~~~---~~~~l~~~~~~~~~~~~-~~~---~~~~l~~~~~~~~~~  256 (353)
T d1jl5a_         187 IVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK-TLPD---LPPSLEALNVRDNYLTD-LPE---LPQSLTFLDVSENIF  256 (353)
T ss_dssp             EECCSSCCS-SCC-CCTTCTTCCEEECCSSCCS-SCCS---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred             ccccccccc-ccc-ccccccccccccccccccc-cccc---ccccccccccccccccc-ccc---ccccccccccccccc
Confidence            666655554 333 3556677777777777665 2332   23556677777777652 222   234555666665555


Q ss_pred             CCCCccccCC-CCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCccc
Q 002883          357 SGPIPLEVGR-LKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMF  435 (871)
Q Consensus       357 ~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~  435 (871)
                      .+     +.. .......++..|.+.+ .+   ..+++|++|+|++|+|+.+ |.   .+++|+.|+|++|+|+ .+|..
T Consensus       257 ~~-----l~~l~~~~~~~~~~~~~~~~-~~---~~~~~L~~L~Ls~N~l~~l-p~---~~~~L~~L~L~~N~L~-~l~~~  322 (353)
T d1jl5a_         257 SG-----LSELPPNLYYLNASSNEIRS-LC---DLPPSLEELNVSNNKLIEL-PA---LPPRLERLIASFNHLA-EVPEL  322 (353)
T ss_dssp             SE-----ESCCCTTCCEEECCSSCCSE-EC---CCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCS-CCCCC
T ss_pred             cc-----cccccchhcccccccCcccc-cc---ccCCCCCEEECCCCccCcc-cc---ccCCCCEEECCCCcCC-ccccc
Confidence            42     111 1344556666666652 22   2346777777777777743 32   3567777888888777 45543


Q ss_pred             ccccccccEEecCCCcCccc
Q 002883          436 LNTFRFLQKLNLSFNNLEGE  455 (871)
Q Consensus       436 ~~~~~~L~~L~l~~N~l~~~  455 (871)
                         +++|++|++++|+++..
T Consensus       323 ---~~~L~~L~L~~N~L~~l  339 (353)
T d1jl5a_         323 ---PQNLKQLHVEYNPLREF  339 (353)
T ss_dssp             ---CTTCCEEECCSSCCSSC
T ss_pred             ---cCCCCEEECcCCcCCCC
Confidence               35677788888887754


No 76 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81  E-value=6.8e-23  Score=229.57  Aligned_cols=109  Identities=19%  Similarity=0.202  Sum_probs=72.8

Q ss_pred             CCCEEecCCCcccccC-CccccCCCcCceeeCCCCcccc----cCCccccCCcccceeeccCccccCCC----Ccccc-c
Q 002883           15 ELRILDLVVNKLEGNI-PSELGNLFKLVGLGLTGNNYTG----SIPQSLSNLSFLQQLSLSENSLSGNI----PSELG-L   84 (871)
Q Consensus        15 ~L~~L~l~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~~~----~~~~~-~   84 (871)
                      +|+.||+++|+|++.. .+-+..+++|++|+|++|.++.    .++..+..+++|++|||++|.|+...    ...+. .
T Consensus         3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~   82 (460)
T d1z7xw1           3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP   82 (460)
T ss_dssp             EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred             CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence            5788999999997532 4446678888999999998873    23455678888999999998876211    11121 1


Q ss_pred             cccccccccccccccCC----CCccccccCCCceeeeeccccc
Q 002883           85 LKQLNMFQVSANYLTGS----IPIQLFNISSMDYFAVTQNKLV  123 (871)
Q Consensus        85 l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~  123 (871)
                      ..+|++|+|++|.+++.    ++..+..+++|++|++++|.+.
T Consensus        83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~  125 (460)
T d1z7xw1          83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG  125 (460)
T ss_dssp             TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred             CCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence            24678888888877632    2334555666666666666654


No 77 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.80  E-value=3.6e-19  Score=178.27  Aligned_cols=188  Identities=26%  Similarity=0.338  Sum_probs=97.0

Q ss_pred             CCccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCE
Q 002883          245 GNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQK  324 (871)
Q Consensus       245 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~  324 (871)
                      +++++|+.|++.+|.|+..  +.+..+++|++|++++|+|++..  .+..+++|+.+++++|.++. + ..++++++|+.
T Consensus        38 ~~l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~~~-i-~~l~~l~~L~~  111 (227)
T d1h6ua2          38 ADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPLKN-V-SAIAGLQSIKT  111 (227)
T ss_dssp             HHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCCSC-C-GGGTTCTTCCE
T ss_pred             HHcCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeeccc--cccccccccccccccccccc-c-ccccccccccc
Confidence            4444455555555554422  23455555555555555554322  24555555555555555542 2 23455555555


Q ss_pred             EecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcc
Q 002883          325 LDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSF  404 (871)
Q Consensus       325 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l  404 (871)
                      +++++|...+.  ..+...+.+..+.++++.+...  ..+..+++|+.|++++|.+++.  ..+..+++|++|+|++|++
T Consensus       112 l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l  185 (227)
T d1h6ua2         112 LDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKI  185 (227)
T ss_dssp             EECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred             ccccccccccc--chhccccchhhhhchhhhhchh--hhhccccccccccccccccccc--hhhcccccceecccCCCcc
Confidence            55555555422  2244455555555555555422  2244555666666666665522  2255566666666666666


Q ss_pred             cccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecC
Q 002883          405 QGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLS  448 (871)
Q Consensus       405 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~  448 (871)
                      +++.  .+.++++|++|+|++|++++. + .+..+++|+.|+++
T Consensus       186 ~~l~--~l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~~L~~L~ls  225 (227)
T d1h6ua2         186 SDIS--PLASLPNLIEVHLKNNQISDV-S-PLANTSNLFIVTLT  225 (227)
T ss_dssp             CCCG--GGGGCTTCCEEECTTSCCCBC-G-GGTTCTTCCEEEEE
T ss_pred             CCCh--hhcCCCCCCEEECcCCcCCCC-c-ccccCCCCCEEEee
Confidence            5432  255566666666666666632 2 25566666666654


No 78 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79  E-value=3e-19  Score=181.03  Aligned_cols=219  Identities=15%  Similarity=0.103  Sum_probs=113.6

Q ss_pred             cEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeeccccccccc-CCccccCCCCCcEEEcc
Q 002883          202 EVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGS-IPTSVGYLLKLQVLSLF  280 (871)
Q Consensus       202 ~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~L~  280 (871)
                      +.++.+++.++ .+|..+.   .++++|+|++|+|+.+.+..|.++++|++|++++|.+... .+.+|..++++++|.+.
T Consensus        11 ~~i~c~~~~l~-~iP~~l~---~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~   86 (242)
T d1xwdc1          11 RVFLCQESKVT-EIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE   86 (242)
T ss_dssp             SEEEEESCSCS-SCCSCSC---SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred             CEEEEeCCCCC-CcCCCCC---CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence            56777777776 5565543   3567777777777654455566666666666666665532 23445556666666554


Q ss_pred             C-CCCCCCCCcccCCCccccEEEccCccccccCcc-cccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCC
Q 002883          281 G-NKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPS-ALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSG  358 (871)
Q Consensus       281 ~-n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~  358 (871)
                      . |++....+..|.++++|++|++++|++....+. .+..+..+..+...++.+....+..|.+++              
T Consensus        87 ~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~--------------  152 (242)
T d1xwdc1          87 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS--------------  152 (242)
T ss_dssp             CCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSB--------------
T ss_pred             ccccccccccccccccccccccccchhhhccccccccccccccccccccccccccccccccccccc--------------
Confidence            3 445444455555555566666655555422221 122233333444444444433333333322              


Q ss_pred             CCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCc-eeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCccccc
Q 002883          359 PIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLE-YLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLN  437 (871)
Q Consensus       359 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~  437 (871)
                               ..++.|++++|+++...+..|. ..+++ .+++++|+|+.+.+..|.++++|++|+|++|+|+...+..|.
T Consensus       153 ---------~~l~~L~l~~n~l~~i~~~~~~-~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~  222 (242)
T d1xwdc1         153 ---------FESVILWLNKNGIQEIHNCAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE  222 (242)
T ss_dssp             ---------SSCEEEECCSSCCCEECTTTTT-TCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCT
T ss_pred             ---------ccceeeeccccccccccccccc-chhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHc
Confidence                     2455555555555533332222 23332 234455556555555566666666666666666644444555


Q ss_pred             ccccccEEecC
Q 002883          438 TFRFLQKLNLS  448 (871)
Q Consensus       438 ~~~~L~~L~l~  448 (871)
                      .+++|+.+++.
T Consensus       223 ~l~~L~~l~~~  233 (242)
T d1xwdc1         223 NLKKLRARSTY  233 (242)
T ss_dssp             TCCEEESSSEE
T ss_pred             CCcccccCcCC
Confidence            55555555543


No 79 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.79  E-value=2e-19  Score=174.70  Aligned_cols=177  Identities=27%  Similarity=0.347  Sum_probs=129.0

Q ss_pred             cEEEccCccccccCcccccCCCCCCEEecCCCcCCC-CCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCC
Q 002883          299 TEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSG-TIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSE  377 (871)
Q Consensus       299 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~  377 (871)
                      ++++.++|+++ .+|..+.  +++++|+|++|+|++ ..+..|.++++|+.|+|++|.+....+..+..+++|++|+|++
T Consensus        11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~   87 (192)
T d1w8aa_          11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE   87 (192)
T ss_dssp             TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred             CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence            45666667666 4454443  567777777777764 3345667777777788877777767777777888888888888


Q ss_pred             CcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCcccccccccccEEecCCCcCcccCC
Q 002883          378 NKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVP  457 (871)
Q Consensus       378 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~  457 (871)
                      |+|+...+..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|.+....+ ...-...++.+.+..|.++|..|
T Consensus        88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~-~~~~~~~l~~~~l~~~~~~c~~p  166 (192)
T d1w8aa_          88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAARCGAP  166 (192)
T ss_dssp             CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG-GHHHHHHHHHHCCSGGGCBBCSS
T ss_pred             ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccc-hHHHhhhhhhhcccCCCeEeCCC
Confidence            88887777778888888888888888888888888888888888888888875332 22223446777888888888766


Q ss_pred             CCcccccccceeccCCCCCccCCC
Q 002883          458 SEGVFKNVRAVSIIGNNKLCGGSP  481 (871)
Q Consensus       458 ~~~~~~~l~~l~l~~N~~~C~~~~  481 (871)
                      ..  +..+..+++..|...|.++.
T Consensus       167 ~~--l~~~~l~~L~~n~l~C~~~~  188 (192)
T d1w8aa_         167 SK--VRDVQIKDLPHSEFKCSSEN  188 (192)
T ss_dssp             TT--TTTSBGGGSCTTTCCCCCC-
T ss_pred             hh--hcCCEeeecCHhhCcCCCCC
Confidence            43  56666777888888887664


No 80 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79  E-value=1.8e-19  Score=182.73  Aligned_cols=220  Identities=15%  Similarity=0.005  Sum_probs=168.6

Q ss_pred             ccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCC-CCCCCCCccc
Q 002883          171 LIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGT-IPTGVGNLKN  249 (871)
Q Consensus       171 L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~-~~~~~~~l~~  249 (871)
                      .+.++.++++++++|..       +.  +++++|+|++|+|+...+..|.++ ++|++|++++|.+... .+..|.++++
T Consensus        10 ~~~i~c~~~~l~~iP~~-------l~--~~l~~L~Ls~n~i~~l~~~~f~~l-~~L~~L~ls~n~~~~~i~~~~f~~l~~   79 (242)
T d1xwdc1          10 NRVFLCQESKVTEIPSD-------LP--RNAIELRFVLTKLRVIQKGAFSGF-GDLEKIEISQNDVLEVIEADVFSNLPK   79 (242)
T ss_dssp             SSEEEEESCSCSSCCSC-------SC--SCCSEEEEESCCCCEECTTTTTTC-TTCCEEEEESCTTCCEECSSSEESCTT
T ss_pred             CCEEEEeCCCCCCcCCC-------CC--CCCCEEECcCCcCCccChhHhhcc-chhhhhhhccccccceeeccccccccc
Confidence            36889999999987753       11  479999999999985444456666 5799999999998754 4567899999


Q ss_pred             cceeeccc-ccccccCCccccCCCCCcEEEccCCCCCCCCCc-ccCCCccccEEEccCccccccCcccccCCC-CCCEEe
Q 002883          250 LILIAMEV-NLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPS-SLGNLIFLTEVDLQGNSIRGSIPSALGNCL-QLQKLD  326 (871)
Q Consensus       250 L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~  326 (871)
                      ++++.+.. |.+....+..|.++++|+.|++++|++....+. .+..+..+..+..+++.+....+..|.+++ .++.|+
T Consensus        80 l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~  159 (242)
T d1xwdc1          80 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILW  159 (242)
T ss_dssp             CCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEE
T ss_pred             cccccccccccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeee
Confidence            99998764 788888889999999999999999999844332 345567777788888899877777888765 799999


Q ss_pred             cCCCcCCCCCcccccCCCCCcE-EeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecC
Q 002883          327 LSDNNLSGTIPREVIGLSSFVL-LDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSD  401 (871)
Q Consensus       327 L~~N~l~~~~~~~~~~l~~L~~-L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~  401 (871)
                      +++|+++...+..+ ...++.. +++++|+++...+..|..+++|++|+|++|+|+...+..|.++++|+.+++.+
T Consensus       160 l~~n~l~~i~~~~~-~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~  234 (242)
T d1xwdc1         160 LNKNGIQEIHNCAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN  234 (242)
T ss_dssp             CCSSCCCEECTTTT-TTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred             cccccccccccccc-cchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCC
Confidence            99999985544444 4455444 46778888854455678888888888888888855566677777777776644


No 81 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.79  E-value=4.4e-19  Score=177.61  Aligned_cols=204  Identities=22%  Similarity=0.308  Sum_probs=144.7

Q ss_pred             cEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccCCccccCCCCCcEEEccC
Q 002883          202 EVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFG  281 (871)
Q Consensus       202 ~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~  281 (871)
                      ..++++.+++++..  ....+ .+|++|++++|.|+..  ..+..+++|+.|++++|.+++..  .+..+++|+.+++++
T Consensus        22 ~~~~l~~~~~~d~~--~~~~l-~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~   94 (227)
T d1h6ua2          22 IKIAAGKSNVTDTV--TQADL-DGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSG   94 (227)
T ss_dssp             HHHHTTCSSTTSEE--CHHHH-HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCS
T ss_pred             HHHHhCCCCcCCcC--CHHHc-CCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeeccc--ccccccccccccccc
Confidence            33445555555432  22333 3577777777777743  35777777888888887777433  377778888888888


Q ss_pred             CCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCc
Q 002883          282 NKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIP  361 (871)
Q Consensus       282 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~  361 (871)
                      |.++. + ..+.++++|+.+++++|...+.  ..+...+.++.+.++++.+...  ..+...++|+.|++++|.+.+.. 
T Consensus        95 n~~~~-i-~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~~-  167 (227)
T d1h6ua2          95 NPLKN-V-SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLT-  167 (227)
T ss_dssp             CCCSC-C-GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCCG-
T ss_pred             ccccc-c-cccccccccccccccccccccc--chhccccchhhhhchhhhhchh--hhhccccccccccccccccccch-
Confidence            88773 3 3477788888888888877643  3356677888888888887632  34667788888888888887332 


Q ss_pred             cccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCC
Q 002883          362 LEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLS  424 (871)
Q Consensus       362 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~  424 (871)
                       .++.+++|+.|+|++|++++ ++ .++.+++|++|+|++|+|+++.+  +.++++|+.|+++
T Consensus       168 -~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls  225 (227)
T d1h6ua2         168 -PLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT  225 (227)
T ss_dssp             -GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred             -hhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence             37788888888888888874 33 37888888999999888886543  7888889888886


No 82 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.77  E-value=7.5e-19  Score=173.22  Aligned_cols=165  Identities=25%  Similarity=0.317  Sum_probs=86.4

Q ss_pred             CCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEe
Q 002883          271 LLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLD  350 (871)
Q Consensus       271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~  350 (871)
                      +.+|+.|++++|.++. ++ .+..+++|++|+|++|+|++..  .++.+++|+.|++++|+|++ ++ .+..+++|+.|+
T Consensus        45 L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~  118 (210)
T d1h6ta2          45 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS  118 (210)
T ss_dssp             HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred             hcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccCcc--ccccCccccccccccccccc-cc-cccccccccccc
Confidence            3344445555554442 11 2444555555555555554322  23445555555555555542 22 345555555555


Q ss_pred             ccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCC
Q 002883          351 LSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSG  430 (871)
Q Consensus       351 ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~  430 (871)
                      +++|.+.. + ..+..++.++.+++++|.+++  +..+..+++|+.+++++|+++++.  .+.++++|++|+|++|++++
T Consensus       119 l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~~  192 (210)
T d1h6ta2         119 LEHNGISD-I-NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHISD  192 (210)
T ss_dssp             CTTSCCCC-C-GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCB
T ss_pred             cccccccc-c-ccccccccccccccccccccc--cccccccccccccccccccccccc--cccCCCCCCEEECCCCCCCC
Confidence            55555542 2 235555566666666666552  234555666666666666665432  25666666666666666653


Q ss_pred             CCcccccccccccEEecCC
Q 002883          431 KIPMFLNTFRFLQKLNLSF  449 (871)
Q Consensus       431 ~~~~~~~~~~~L~~L~l~~  449 (871)
                       +| .+..+++|++|+|++
T Consensus       193 -l~-~l~~l~~L~~L~Ls~  209 (210)
T d1h6ta2         193 -LR-ALAGLKNLDVLELFS  209 (210)
T ss_dssp             -CG-GGTTCTTCSEEEEEE
T ss_pred             -Ch-hhcCCCCCCEEEccC
Confidence             33 466666666666653


No 83 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77  E-value=1.1e-21  Score=219.60  Aligned_cols=61  Identities=20%  Similarity=0.247  Sum_probs=35.8

Q ss_pred             cCceeeCCCCcccccC-CccccCCcccceeeccCccccC----CCCcccccccccccccccccccc
Q 002883           39 KLVGLGLTGNNYTGSI-PQSLSNLSFLQQLSLSENSLSG----NIPSELGLLKQLNMFQVSANYLT   99 (871)
Q Consensus        39 ~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~   99 (871)
                      +|+.|+++.|++++.. .+-+..+++++.|+|++|.++.    .++..+..+++|++|+|++|+|+
T Consensus         3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~   68 (460)
T d1z7xw1           3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELG   68 (460)
T ss_dssp             EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCH
T ss_pred             CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCC
Confidence            4667777777776321 2335556667777777776652    22333455666666666666664


No 84 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.77  E-value=8e-19  Score=170.41  Aligned_cols=127  Identities=24%  Similarity=0.381  Sum_probs=70.1

Q ss_pred             eeecccccccccCCccccCCCCCcEEEccCCCCCC-CCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCC
Q 002883          252 LIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISG-EIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDN  330 (871)
Q Consensus       252 ~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N  330 (871)
                      .+++++++++ .+|..+.  +++++|+|++|+|+. ..+..|.++++|++|+|++|++....+..|..+++|++|+|++|
T Consensus        12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N   88 (192)
T d1w8aa_          12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN   88 (192)
T ss_dssp             EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred             EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence            3444444444 2333331  355555555555543 22344555556666666666655555555555666666666666


Q ss_pred             cCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCC
Q 002883          331 NLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLS  381 (871)
Q Consensus       331 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~  381 (871)
                      +|+++.+..|.++++|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus        89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~  139 (192)
T d1w8aa_          89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN  139 (192)
T ss_dssp             CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred             cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence            665555555555666666666666665444555566666666666666655


No 85 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.76  E-value=1.1e-18  Score=170.55  Aligned_cols=162  Identities=27%  Similarity=0.378  Sum_probs=88.8

Q ss_pred             CCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCcEE
Q 002883          270 YLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLL  349 (871)
Q Consensus       270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L  349 (871)
                      .+.++++|++++|.|+. + +.+..+++|++|+|++|+|++..+  ++++++|++|++++|.+. .++ .+.++++|+.|
T Consensus        38 ~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L  111 (199)
T d2omxa2          38 DLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGL  111 (199)
T ss_dssp             HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEE
T ss_pred             HhcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc--ccCCcccccccccccccc-ccc-ccccccccccc
Confidence            34455555555555542 2 224555555555555555553222  555555556666555554 222 25555566666


Q ss_pred             eccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCC
Q 002883          350 DLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFS  429 (871)
Q Consensus       350 ~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~  429 (871)
                      ++++|.+...  ..+..+++|+.|++++|++. .+ +.+..+++|++|++++|++++..  .++++++|++|++++|+++
T Consensus       112 ~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~-~~-~~l~~~~~L~~L~l~~n~l~~l~--~l~~l~~L~~L~ls~N~i~  185 (199)
T d2omxa2         112 TLFNNQITDI--DPLKNLTNLNRLELSSNTIS-DI-SALSGLTSLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVS  185 (199)
T ss_dssp             ECCSSCCCCC--GGGTTCTTCSEEECCSSCCC-CC-GGGTTCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred             cccccccccc--cccchhhhhHHhhhhhhhhc-cc-ccccccccccccccccccccCCc--cccCCCCCCEEECCCCCCC
Confidence            6665555422  23555666666666666665 22 24556666666666666666432  3566666777777777666


Q ss_pred             CCCcccccccccccEE
Q 002883          430 GKIPMFLNTFRFLQKL  445 (871)
Q Consensus       430 ~~~~~~~~~~~~L~~L  445 (871)
                      + ++ .+..+++|++|
T Consensus       186 ~-i~-~l~~L~~L~~L  199 (199)
T d2omxa2         186 D-IS-VLAKLTNLESL  199 (199)
T ss_dssp             C-CG-GGGGCTTCSEE
T ss_pred             C-Cc-cccCCCCCCcC
Confidence            3 33 35566666654


No 86 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75  E-value=3.8e-18  Score=168.10  Aligned_cols=145  Identities=29%  Similarity=0.403  Sum_probs=70.1

Q ss_pred             ccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCc
Q 002883          268 VGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFV  347 (871)
Q Consensus       268 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~  347 (871)
                      +..+++|++|+|++|+|++. + .++.+++|+.|++++|+|++ ++ .+.++++|+.|++++|.+. .+ ..+..+++|+
T Consensus        64 l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~-~~-~~l~~l~~l~  137 (210)
T d1h6ta2          64 IQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGIS-DI-NGLVHLPQLE  137 (210)
T ss_dssp             GGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCC-CC-GGGGGCTTCC
T ss_pred             HhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccccc-cc-ccccccccccccccccccc-cc-cccccccccc
Confidence            34444444444444444421 1 23444455555555555442 22 2444555555555555544 11 2344455555


Q ss_pred             EEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCC
Q 002883          348 LLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLS  424 (871)
Q Consensus       348 ~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~  424 (871)
                      .+++++|.+++  +..+..+++|+.+++++|++++ ++ .+..+++|++|+|++|+|+++ + .+.++++|++|+|+
T Consensus       138 ~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~Ls  208 (210)
T d1h6ta2         138 SLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELF  208 (210)
T ss_dssp             EEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEE
T ss_pred             ccccccccccc--cccccccccccccccccccccc-cc-cccCCCCCCEEECCCCCCCCC-h-hhcCCCCCCEEEcc
Confidence            55555555542  2234445555555555555552 22 255555555556655555532 2 35555666666554


No 87 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74  E-value=8.6e-18  Score=164.05  Aligned_cols=162  Identities=27%  Similarity=0.371  Sum_probs=84.5

Q ss_pred             CccccceeecccccccccCCccccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEE
Q 002883          246 NLKNLILIAMEVNLLTGSIPTSVGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKL  325 (871)
Q Consensus       246 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L  325 (871)
                      .+++++.|++++|.|+..  +.++.+++|++|++++|+|++..  .++++++|++|++++|.+.. ++ .+.++++|+.|
T Consensus        38 ~l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L  111 (199)
T d2omxa2          38 DLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGL  111 (199)
T ss_dssp             HHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEE
T ss_pred             HhcCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCcc--cccCCccccccccccccccc-cc-ccccccccccc
Confidence            344444445544444421  23445555555555555555322  15555555555555555542 22 25555556666


Q ss_pred             ecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCccc
Q 002883          326 DLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQ  405 (871)
Q Consensus       326 ~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~  405 (871)
                      ++++|.+...  ..+..+++|+.|++++|++. .++ .+..+++|+.|++++|++++. + .+.++++|++|++++|+|+
T Consensus       112 ~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~-~~~-~l~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~  185 (199)
T d2omxa2         112 TLFNNQITDI--DPLKNLTNLNRLELSSNTIS-DIS-ALSGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVS  185 (199)
T ss_dssp             ECCSSCCCCC--GGGTTCTTCSEEECCSSCCC-CCG-GGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC
T ss_pred             cccccccccc--cccchhhhhHHhhhhhhhhc-ccc-cccccccccccccccccccCC-c-cccCCCCCCEEECCCCCCC
Confidence            6655555422  23455556666666666654 222 355566666666666666532 2 3556666666666666665


Q ss_pred             ccCccccCCCCCCCEE
Q 002883          406 GPIHSGFSSLKGLQDL  421 (871)
Q Consensus       406 ~~~~~~~~~l~~L~~L  421 (871)
                      ++  ..++++++|+.|
T Consensus       186 ~i--~~l~~L~~L~~L  199 (199)
T d2omxa2         186 DI--SVLAKLTNLESL  199 (199)
T ss_dssp             CC--GGGGGCTTCSEE
T ss_pred             CC--ccccCCCCCCcC
Confidence            43  235556666554


No 88 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58  E-value=4.9e-16  Score=160.44  Aligned_cols=221  Identities=18%  Similarity=0.174  Sum_probs=108.7

Q ss_pred             EEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccccccccC-CccccCCCCCcEEEccC
Q 002883          203 VVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVNLLTGSI-PTSVGYLLKLQVLSLFG  281 (871)
Q Consensus       203 ~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~L~~  281 (871)
                      +|||+++.+.......+..  ..+..+.++...+.. .........+|++|++++|.++... ...+..+++|++|+|++
T Consensus         4 ~lDLs~~~l~~~~l~~l~~--~~~~~lrl~~~~~~~-~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~   80 (284)
T d2astb2           4 TLDLTGKNLHPDVTGRLLS--QGVIAFRCPRSFMDQ-PLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG   80 (284)
T ss_dssp             EEECTTCBCCHHHHHHHHH--TTCSEEECTTCEECS-CCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred             EEECCCCCCCchHHHHHHh--ccceEeecccccccc-chhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence            5777777665222222222  135566666655542 2222334456666666666665322 23345566666666666


Q ss_pred             CCCCCCCCcccCCCccccEEEccCc-cccccC-cccccCCCCCCEEecCCC-cCCCC-Cccccc-CCCCCcEEeccCCC-
Q 002883          282 NKISGEIPSSLGNLIFLTEVDLQGN-SIRGSI-PSALGNCLQLQKLDLSDN-NLSGT-IPREVI-GLSSFVLLDLSRNH-  355 (871)
Q Consensus       282 n~l~~~~~~~~~~l~~L~~L~L~~N-~i~~~~-~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~-~l~~L~~L~ls~N~-  355 (871)
                      |.++...+..++.+++|++|+|++| .++... ...+.++++|++|+++++ .+++. ....+. ..++|+.|+++++. 
T Consensus        81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~  160 (284)
T d2astb2          81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK  160 (284)
T ss_dssp             CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG
T ss_pred             cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccc
Confidence            6665555555666666666666663 343211 112234566666666664 23211 111121 22455666665432 


Q ss_pred             -CCCC-CccccCCCCCCCEEeCCCC-cCCCCCccchhcccCCceeeecCC-cccccCccccCCCCCCCEEeCCCC
Q 002883          356 -LSGP-IPLEVGRLKGIQQLDLSEN-KLSGEIPTSLASCVGLEYLNFSDN-SFQGPIHSGFSSLKGLQDLDLSRN  426 (871)
Q Consensus       356 -l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~N  426 (871)
                       +++. +...+..+++|++|++++| .+++.....+..+++|++|+|++| .|++.....++.+++|+.|+++++
T Consensus       161 ~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~  235 (284)
T d2astb2         161 NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI  235 (284)
T ss_dssp             GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred             ccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence             2211 1111233555555555554 244444445555555555555553 444444444555555555555554


No 89 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57  E-value=1.7e-15  Score=141.36  Aligned_cols=128  Identities=20%  Similarity=0.210  Sum_probs=79.9

Q ss_pred             ccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCc
Q 002883          316 LGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLE  395 (871)
Q Consensus       316 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~  395 (871)
                      |.++.+|++|+|++|+|+ .++..+..+++|+.|+|++|+|+ .++ .+..+++|++|++++|+++...+..+..+++|+
T Consensus        14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~   90 (162)
T d1a9na_          14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT   90 (162)
T ss_dssp             EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred             ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccc
Confidence            445556666666666666 34444555666666666666666 232 366667777777777777654445556677777


Q ss_pred             eeeecCCcccccCc-cccCCCCCCCEEeCCCCcCCCCC---cccccccccccEEe
Q 002883          396 YLNFSDNSFQGPIH-SGFSSLKGLQDLDLSRNNFSGKI---PMFLNTFRFLQKLN  446 (871)
Q Consensus       396 ~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~---~~~~~~~~~L~~L~  446 (871)
                      +|++++|+|+.... ..+..+++|++|++++|+++...   +..+..+|+|+.||
T Consensus        91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD  145 (162)
T d1a9na_          91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD  145 (162)
T ss_dssp             EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred             cceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence            77777777764432 45667777777777777776322   12466677777766


No 90 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.57  E-value=2.8e-15  Score=132.83  Aligned_cols=102  Identities=25%  Similarity=0.359  Sum_probs=74.9

Q ss_pred             CEEecCCCcccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccccccc
Q 002883           17 RILDLVVNKLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQVSAN   96 (871)
Q Consensus        17 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n   96 (871)
                      |.|||++|+|+ .++ .++++.+|++|++++|+|+ .+|+.|+.+++|++|++++|+|+ .+| .++.+++|++|++++|
T Consensus         1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N   75 (124)
T d1dcea3           1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN   75 (124)
T ss_dssp             SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred             CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCC
Confidence            57888888887 454 4788888888888888888 67777888888888888888887 555 4788888888888888


Q ss_pred             cccCCC-CccccccCCCceeeeeccccc
Q 002883           97 YLTGSI-PIQLFNISSMDYFAVTQNKLV  123 (871)
Q Consensus        97 ~l~~~~-~~~~~~l~~L~~L~l~~n~l~  123 (871)
                      +++... ...+..+++|+.|++++|.+.
T Consensus        76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~  103 (124)
T d1dcea3          76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC  103 (124)
T ss_dssp             CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred             ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence            887322 234555566666666666554


No 91 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56  E-value=2.1e-15  Score=140.64  Aligned_cols=127  Identities=19%  Similarity=0.143  Sum_probs=67.8

Q ss_pred             ccCCCCCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCCcccccCCCCCc
Q 002883          268 VGYLLKLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFV  347 (871)
Q Consensus       268 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~  347 (871)
                      |.++.+|++|+|++|+|+ .++..+..+++|+.|+|++|+|+..  +.|..+++|++|++++|++++..+..+..+++|+
T Consensus        14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~   90 (162)
T d1a9na_          14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT   90 (162)
T ss_dssp             EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred             ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccc
Confidence            344455666666666665 3344445555666666666666532  2355566666666666666544444444555666


Q ss_pred             EEeccCCCCCCCCc-cccCCCCCCCEEeCCCCcCCCCCcc----chhcccCCceee
Q 002883          348 LLDLSRNHLSGPIP-LEVGRLKGIQQLDLSENKLSGEIPT----SLASCVGLEYLN  398 (871)
Q Consensus       348 ~L~ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~  398 (871)
                      .|++++|+|+.... ..+..+++|++|++++|+++ ..|.    .+..+++|+.||
T Consensus        91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~-~~~~~r~~~i~~lp~L~~LD  145 (162)
T d1a9na_          91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLD  145 (162)
T ss_dssp             EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred             cceeccccccccccccccccccccchhhcCCCccc-cccchHHHHHHHCCCcCeeC
Confidence            66666666552211 24555566666666666665 2222    344555555544


No 92 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.55  E-value=8e-15  Score=129.78  Aligned_cols=87  Identities=34%  Similarity=0.397  Sum_probs=33.1

Q ss_pred             cCCCCCCCEEeCCCCcCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCc-ccccccccc
Q 002883          364 VGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIP-MFLNTFRFL  442 (871)
Q Consensus       364 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~~~L  442 (871)
                      +..+++|++|++++|+|+ .+|..|..+++|+.|++++|+|++. + .+..+++|++|++++|+|++... ..+..+++|
T Consensus        16 l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L   92 (124)
T d1dcea3          16 LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRL   92 (124)
T ss_dssp             GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred             cccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc-C-ccccccccCeEECCCCccCCCCCchhhcCCCCC
Confidence            333333444444444433 2333333344444444444444322 1 23334444444444444432211 233334444


Q ss_pred             cEEecCCCcCc
Q 002883          443 QKLNLSFNNLE  453 (871)
Q Consensus       443 ~~L~l~~N~l~  453 (871)
                      +.|++++|+++
T Consensus        93 ~~L~l~~N~i~  103 (124)
T d1dcea3          93 VLLNLQGNSLC  103 (124)
T ss_dssp             CEEECTTSGGG
T ss_pred             CEEECCCCcCC
Confidence            44444444443


No 93 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54  E-value=8e-16  Score=158.81  Aligned_cols=180  Identities=20%  Similarity=0.235  Sum_probs=88.9

Q ss_pred             CcccEEEccCCcCcccCChhhhhccccccEEEccCCccCCCCCCCCCCccccceeecccc-cccccCCcc-ccCCCCCcE
Q 002883          199 TFLEVVSLSSNSLSGVLPNSIANFSSHLIYLYMSANRISGTIPTGVGNLKNLILIAMEVN-LLTGSIPTS-VGYLLKLQV  276 (871)
Q Consensus       199 ~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N-~l~~~~~~~-~~~l~~L~~  276 (871)
                      .+|++|||++|.++......+..-.++|++|+|++|.+++..+..++.+++|+.|+++++ .++...... +..+++|++
T Consensus        46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~  125 (284)
T d2astb2          46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE  125 (284)
T ss_dssp             BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred             CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence            456677777666653322333333345666666666665555555556666666666663 344211111 234566666


Q ss_pred             EEccCCC-CCCC-CCcccCC-CccccEEEccCcc--cccc-CcccccCCCCCCEEecCCC-cCCCCCcccccCCCCCcEE
Q 002883          277 LSLFGNK-ISGE-IPSSLGN-LIFLTEVDLQGNS--IRGS-IPSALGNCLQLQKLDLSDN-NLSGTIPREVIGLSSFVLL  349 (871)
Q Consensus       277 L~L~~n~-l~~~-~~~~~~~-l~~L~~L~L~~N~--i~~~-~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L  349 (871)
                      |++++|. ++.. ....+.. .++|+.|+++++.  ++.. +...+.++++|++|++++| .+++.....+..+++|++|
T Consensus       126 L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L  205 (284)
T d2astb2         126 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL  205 (284)
T ss_dssp             EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred             cccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEE
Confidence            6666642 3211 1111222 2456666665532  2211 1122234555666666554 3444444455555555555


Q ss_pred             eccCC-CCCCCCccccCCCCCCCEEeCCCC
Q 002883          350 DLSRN-HLSGPIPLEVGRLKGIQQLDLSEN  378 (871)
Q Consensus       350 ~ls~N-~l~~~~~~~~~~l~~L~~L~L~~N  378 (871)
                      ++++| .+++.....++++++|+.|+++++
T Consensus       206 ~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~  235 (284)
T d2astb2         206 SLSRCYDIIPETLLELGEIPTLKTLQVFGI  235 (284)
T ss_dssp             ECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred             ECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence            55553 344434444555555555555554


No 94 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.53  E-value=3.2e-16  Score=167.35  Aligned_cols=187  Identities=18%  Similarity=0.171  Sum_probs=115.1

Q ss_pred             ccCCCCCcEEEccCCCCCCCC----CcccCCCccccEEEccCccccccCccc-------------ccCCCCCCEEecCCC
Q 002883          268 VGYLLKLQVLSLFGNKISGEI----PSSLGNLIFLTEVDLQGNSIRGSIPSA-------------LGNCLQLQKLDLSDN  330 (871)
Q Consensus       268 ~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~N~i~~~~~~~-------------~~~l~~L~~L~L~~N  330 (871)
                      +...++|+.|+|++|.++...    ...+...++|++|++++|.+.......             ....+.|+.|++++|
T Consensus        89 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n  168 (344)
T d2ca6a1          89 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN  168 (344)
T ss_dssp             HTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSS
T ss_pred             HhhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccc
Confidence            344556666666666665421    222334566677777666654211111             123567778888887


Q ss_pred             cCCCCC----cccccCCCCCcEEeccCCCCCCC-----CccccCCCCCCCEEeCCCCcCCCC----CccchhcccCCcee
Q 002883          331 NLSGTI----PREVIGLSSFVLLDLSRNHLSGP-----IPLEVGRLKGIQQLDLSENKLSGE----IPTSLASCVGLEYL  397 (871)
Q Consensus       331 ~l~~~~----~~~~~~l~~L~~L~ls~N~l~~~-----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L  397 (871)
                      .++...    ...+...+.|+.|+|++|.++..     +...+..+++|+.|+|++|.++..    +...+..+++|++|
T Consensus       169 ~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L  248 (344)
T d2ca6a1         169 RLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL  248 (344)
T ss_dssp             CCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred             cccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhh
Confidence            776322    22344567788888888877632     233466677888888888887632    33455677888888


Q ss_pred             eecCCcccccCccc----cC--CCCCCCEEeCCCCcCCCC----Cccccc-ccccccEEecCCCcCcc
Q 002883          398 NFSDNSFQGPIHSG----FS--SLKGLQDLDLSRNNFSGK----IPMFLN-TFRFLQKLNLSFNNLEG  454 (871)
Q Consensus       398 ~L~~N~l~~~~~~~----~~--~l~~L~~L~l~~N~l~~~----~~~~~~-~~~~L~~L~l~~N~l~~  454 (871)
                      +|++|.|++.....    +.  ..+.|++|++++|+|+..    +...+. .+++|+.|+|++|++..
T Consensus       249 ~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~  316 (344)
T d2ca6a1         249 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE  316 (344)
T ss_dssp             ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred             hhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence            88888887543222    22  235688888888888632    223332 46788888888888864


No 95 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.52  E-value=2.7e-16  Score=167.91  Aligned_cols=251  Identities=16%  Similarity=0.186  Sum_probs=142.2

Q ss_pred             CCCccccCCCcccEEecccccCCCCCCCCccccccccCCCcccEEEccCCcCccc---CChhhhhccccccEEEccCCcc
Q 002883          160 SIPEDLGKLKNLIRLNFARNNLGTGKGNDLRFLDSLVNCTFLEVVSLSSNSLSGV---LPNSIANFSSHLIYLYMSANRI  236 (871)
Q Consensus       160 ~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~---~~~~~~~~~~~L~~L~L~~n~i  236 (871)
                      .+...+.....|++|+|++|.+......  .....+...++|+.|+++++.....   .+..+..+              
T Consensus        22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~--~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l--------------   85 (344)
T d2ca6a1          22 SVFAVLLEDDSVKEIVLSGNTIGTEAAR--WLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLL--------------   85 (344)
T ss_dssp             TTSHHHHHCSCCCEEECTTSEECHHHHH--HHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHH--------------
T ss_pred             HHHHHHhhCCCCCEEECcCCcCCHHHHH--HHHHHHHhCCCCCEEECCCCcccccccccchHHHHH--------------
Confidence            4555666777788888888776542110  1223456667777777776654311   11111111              


Q ss_pred             CCCCCCCCCCccccceeecccccccccC----CccccCCCCCcEEEccCCCCCCCCCcc-------------cCCCcccc
Q 002883          237 SGTIPTGVGNLKNLILIAMEVNLLTGSI----PTSVGYLLKLQVLSLFGNKISGEIPSS-------------LGNLIFLT  299 (871)
Q Consensus       237 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~-------------~~~l~~L~  299 (871)
                          ...+...++|+.|+|++|.++...    ...+...++|++|++++|.+.......             ....+.|+
T Consensus        86 ----~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~  161 (344)
T d2ca6a1          86 ----LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLR  161 (344)
T ss_dssp             ----HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             ----HHHHhhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccc
Confidence                111223344444455544444321    122334456666666666554211100             12345677


Q ss_pred             EEEccCcccccc----CcccccCCCCCCEEecCCCcCCCC-----CcccccCCCCCcEEeccCCCCCCC----CccccCC
Q 002883          300 EVDLQGNSIRGS----IPSALGNCLQLQKLDLSDNNLSGT-----IPREVIGLSSFVLLDLSRNHLSGP----IPLEVGR  366 (871)
Q Consensus       300 ~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~-----~~~~~~~l~~L~~L~ls~N~l~~~----~~~~~~~  366 (871)
                      .+++++|+++..    +...+...+.|+.|+|++|+|+..     +...+...++|+.|+|++|.++..    +...+..
T Consensus       162 ~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~  241 (344)
T d2ca6a1         162 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS  241 (344)
T ss_dssp             EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred             eeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccc
Confidence            777777766532    223344567777888877777531     233455677788888888877532    2345667


Q ss_pred             CCCCCEEeCCCCcCCCCCccch----hc--ccCCceeeecCCcccccC----cccc-CCCCCCCEEeCCCCcCCC
Q 002883          367 LKGIQQLDLSENKLSGEIPTSL----AS--CVGLEYLNFSDNSFQGPI----HSGF-SSLKGLQDLDLSRNNFSG  430 (871)
Q Consensus       367 l~~L~~L~L~~N~l~~~~~~~~----~~--l~~L~~L~L~~N~l~~~~----~~~~-~~l~~L~~L~l~~N~l~~  430 (871)
                      +++|++|+|++|.|++.....+    ..  ...|++|++++|+|+...    ...+ .++++|++|+|++|+++.
T Consensus       242 ~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~  316 (344)
T d2ca6a1         242 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE  316 (344)
T ss_dssp             CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred             cccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence            7888888888888874433333    22  356888888888886432    2223 256789999999999874


No 96 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43  E-value=1.4e-13  Score=127.16  Aligned_cols=112  Identities=18%  Similarity=0.078  Sum_probs=89.1

Q ss_pred             CCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCC-cCCCCCccchhcccCCceeeecCCcccccCccccCCCCCCCEEe
Q 002883          344 SSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSEN-KLSGEIPTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLD  422 (871)
Q Consensus       344 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~  422 (871)
                      ...+.++.+++.+. ..|..+..+++|++|++++| .|+.+.+..|.++++|+.|+|++|+|+.+.+.+|..+++|++|+
T Consensus         8 ~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~   86 (156)
T d2ifga3           8 HGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN   86 (156)
T ss_dssp             SSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred             CCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence            34566888888887 56777888888899998766 48866677888888899999999998888888888888999999


Q ss_pred             CCCCcCCCCCcccccccccccEEecCCCcCcccCC
Q 002883          423 LSRNNFSGKIPMFLNTFRFLQKLNLSFNNLEGEVP  457 (871)
Q Consensus       423 l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~  457 (871)
                      |++|+|+...+..+..+ +|+.|+|++|+|.|.+.
T Consensus        87 Ls~N~l~~l~~~~~~~~-~l~~L~L~~Np~~C~C~  120 (156)
T d2ifga3          87 LSFNALESLSWKTVQGL-SLQELVLSGNPLHCSCA  120 (156)
T ss_dssp             CCSSCCSCCCSTTTCSC-CCCEEECCSSCCCCCGG
T ss_pred             ccCCCCcccChhhhccc-cccccccCCCcccCCch
Confidence            99999886555555544 68888888888887663


No 97 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41  E-value=2.7e-13  Score=125.24  Aligned_cols=107  Identities=20%  Similarity=0.188  Sum_probs=56.7

Q ss_pred             CCCEEecCCCcCCCCCcccccCCCCCcEEeccCC-CCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCCceeee
Q 002883          321 QLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRN-HLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGLEYLNF  399 (871)
Q Consensus       321 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L  399 (871)
                      ..+.++.+++.+. ..|..+.++++|++|++++| .|+...+..|..+++|+.|+|++|+|+.+.+..|..+++|++|+|
T Consensus         9 ~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L   87 (156)
T d2ifga3           9 GSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL   87 (156)
T ss_dssp             SSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred             CCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceec
Confidence            3444555555555 34455555555555555443 355344445555555555555555555444555555555555555


Q ss_pred             cCCcccccCccccCCCCCCCEEeCCCCcCC
Q 002883          400 SDNSFQGPIHSGFSSLKGLQDLDLSRNNFS  429 (871)
Q Consensus       400 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~  429 (871)
                      ++|+|+.+.+..|..+ +|+.|+|++|.+.
T Consensus        88 s~N~l~~l~~~~~~~~-~l~~L~L~~Np~~  116 (156)
T d2ifga3          88 SFNALESLSWKTVQGL-SLQELVLSGNPLH  116 (156)
T ss_dssp             CSSCCSCCCSTTTCSC-CCCEEECCSSCCC
T ss_pred             cCCCCcccChhhhccc-cccccccCCCccc
Confidence            5555554444444433 4555555555554


No 98 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.39  E-value=3.6e-15  Score=144.31  Aligned_cols=110  Identities=25%  Similarity=0.330  Sum_probs=51.9

Q ss_pred             cccCCCCCCEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCccccCCCCCCCEEeCCCCcCCCCCccchhcccCC
Q 002883          315 ALGNCLQLQKLDLSDNNLSGTIPREVIGLSSFVLLDLSRNHLSGPIPLEVGRLKGIQQLDLSENKLSGEIPTSLASCVGL  394 (871)
Q Consensus       315 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L  394 (871)
                      .+..+++|++|+|++|+|+. ++ .+.++++|+.|+|++|.|+ .+|..+..+++|+.|++++|+++. + ..+..+++|
T Consensus        43 sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~L  117 (198)
T d1m9la_          43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVNL  117 (198)
T ss_dssp             HHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHHS
T ss_pred             HHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-ccccccccc
Confidence            34444444444444444442 22 2444444444444444444 233333334445555555555552 2 234555555


Q ss_pred             ceeeecCCcccccCc-cccCCCCCCCEEeCCCCcCC
Q 002883          395 EYLNFSDNSFQGPIH-SGFSSLKGLQDLDLSRNNFS  429 (871)
Q Consensus       395 ~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~  429 (871)
                      +.|++++|+|+.... ..+..+++|+.|+|++|+++
T Consensus       118 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~  153 (198)
T d1m9la_         118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY  153 (198)
T ss_dssp             SEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred             cccccccchhccccccccccCCCccceeecCCCccc
Confidence            555555555553321 34555555555555555554


No 99 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.39  E-value=4.8e-15  Score=143.37  Aligned_cols=127  Identities=23%  Similarity=0.242  Sum_probs=83.1

Q ss_pred             CCCEEecCCC--cccccCCccccCCCcCceeeCCCCcccccCCccccCCcccceeeccCccccCCCCccccccccccccc
Q 002883           15 ELRILDLVVN--KLEGNIPSELGNLFKLVGLGLTGNNYTGSIPQSLSNLSFLQQLSLSENSLSGNIPSELGLLKQLNMFQ   92 (871)
Q Consensus        15 ~L~~L~l~~n--~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~   92 (871)
                      .++.++++++  .++ .+|.+++.|.+|++|+|++|+|+ .++ .|..+++|++|+|++|+|+ .+|..+..+++|++|+
T Consensus        24 ~~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~   99 (198)
T d1m9la_          24 EAEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELW   99 (198)
T ss_dssp             TCSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEE
T ss_pred             ccceeeeecccCchh-hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccc
Confidence            3555666654  344 56677777888888888888877 443 4777778888888888776 5666666667777777


Q ss_pred             cccccccCCCCccccccCCCceeeeecccccccccc-ccccCCCCccEEEccCccCC
Q 002883           93 VSANYLTGSIPIQLFNISSMDYFAVTQNKLVGEIPH-YVGFTLPNIRVLLLGSNWFT  148 (871)
Q Consensus        93 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~~l~~L~~L~l~~n~i~  148 (871)
                      +++|+++. + ..+..+++|+.|++++|++. .++. ..+..+++|+.|+|++|+++
T Consensus       100 l~~N~i~~-l-~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~L~~N~l~  153 (198)
T d1m9la_         100 ISYNQIAS-L-SGIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLY  153 (198)
T ss_dssp             CSEEECCC-H-HHHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred             cccccccc-c-ccccccccccccccccchhc-cccccccccCCCccceeecCCCccc
Confidence            77777773 3 23666677777777777665 3332 12235666666666666554


No 100
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.63  E-value=1.4e-09  Score=100.55  Aligned_cols=87  Identities=22%  Similarity=0.219  Sum_probs=50.2

Q ss_pred             cCCCCCCCEEeCCCCcCCCCC--ccchhcccCCceeeecCCcccccCccccCCCCCCCEEeCCCCcCCCCCc-------c
Q 002883          364 VGRLKGIQQLDLSENKLSGEI--PTSLASCVGLEYLNFSDNSFQGPIHSGFSSLKGLQDLDLSRNNFSGKIP-------M  434 (871)
Q Consensus       364 ~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-------~  434 (871)
                      +..+++|++|+|++|+|+...  +..+..+++|+.|+|++|+|+...+-.+....+|+.|++++|.+++...       .
T Consensus        61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~  140 (162)
T d1koha1          61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA  140 (162)
T ss_dssp             HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHH
T ss_pred             HHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHH
Confidence            344666666666666666332  2345566677777777777665544344444556777777777664433       2


Q ss_pred             cccccccccEEecCCCcC
Q 002883          435 FLNTFRFLQKLNLSFNNL  452 (871)
Q Consensus       435 ~~~~~~~L~~L~l~~N~l  452 (871)
                      .+..+|+|+.||  |+++
T Consensus       141 i~~~~P~L~~LD--g~~v  156 (162)
T d1koha1         141 IRERFPKLLRLD--GHEL  156 (162)
T ss_dssp             HHTTSTTCCEET--TEEC
T ss_pred             HHHHCCCCCEEC--cCCC
Confidence            245567777654  4444


No 101
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.56  E-value=9.7e-08  Score=96.03  Aligned_cols=150  Identities=18%  Similarity=0.126  Sum_probs=102.4

Q ss_pred             HHHHHhhcCCCCCceeeccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccCc
Q 002883          552 AELLKATEGFSSANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDT  630 (871)
Q Consensus       552 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~  630 (871)
                      .++..-.+.|++.+..+.++.+.||+...  +++.+++|+...........+.+|...+..+. +--+.+++.+....  
T Consensus         7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~--   82 (263)
T d1j7la_           7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD--   82 (263)
T ss_dssp             HHHHHHHTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET--
T ss_pred             HHHHHhhhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecC--
Confidence            45556667787777655555678998864  56678899886554444456778888887763 43456666654433  


Q ss_pred             CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------
Q 002883          631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC----------------------  688 (871)
Q Consensus       631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------  688 (871)
                         +..++||++++|.++.+.....            .....++.++++.++.||+..                      
T Consensus        83 ---~~~~lv~~~l~G~~~~~~~~~~------------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~  147 (263)
T d1j7la_          83 ---GWSNLLMSEADGVLCSEEYEDE------------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLN  147 (263)
T ss_dssp             ---TEEEEEEECCSSEEHHHHTTTC------------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHH
T ss_pred             ---CceEEEEEeccccccccccccc------------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHH
Confidence               5578999999998886654221            112334556666666666432                      


Q ss_pred             ----------------------------------CCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883          689 ----------------------------------HTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL  720 (871)
Q Consensus       689 ----------------------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  720 (871)
                                                        ...++|+|+.|.||++++++.+-++||+.+..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         148 NDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHhhhhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                              12389999999999999877677999998864


No 102
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.55  E-value=3e-09  Score=98.28  Aligned_cols=104  Identities=23%  Similarity=0.175  Sum_probs=49.2

Q ss_pred             CCcEEEccCCCCCCCCCcccCCCccccEEEccCccccccCcccccCCCCCCEEecCCCcCCCCC--cccccCCCCCcEEe
Q 002883          273 KLQVLSLFGNKISGEIPSSLGNLIFLTEVDLQGNSIRGSIPSALGNCLQLQKLDLSDNNLSGTI--PREVIGLSSFVLLD  350 (871)
Q Consensus       273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~  350 (871)
                      ..+.|+++++...    ..+..+..+..++...|.+. .++..+..+++|++|+|++|+|+...  +..+..+++|+.|+
T Consensus        23 ~~~~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~   97 (162)
T d1koha1          23 SQQALDLKGLRSD----PDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILN   97 (162)
T ss_dssp             SSCCBCCCCCSSC----TTTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCC
T ss_pred             hhCeeecccCCCC----chhhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccc
Confidence            3455566554432    12334444444445444443 34444455666666677776666332  22334455555555


Q ss_pred             ccCCCCCCCCccccCCCCCCCEEeCCCCcCC
Q 002883          351 LSRNHLSGPIPLEVGRLKGIQQLDLSENKLS  381 (871)
Q Consensus       351 ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~  381 (871)
                      |++|.|+...+..+....+|+.|++++|+++
T Consensus        98 Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~  128 (162)
T d1koha1          98 LSGNELKSERELDKIKGLKLEELWLDGNSLS  128 (162)
T ss_dssp             CTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred             cccCccccchhhhhhhccccceeecCCCCcC
Confidence            5555555322212222234445555555444


No 103
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=97.93  E-value=6.4e-06  Score=81.74  Aligned_cols=131  Identities=15%  Similarity=0.071  Sum_probs=81.2

Q ss_pred             eeecccc-ceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCC--CCccceeeeeecccCcCCCceeeEEEec
Q 002883          566 LIGIGGY-GYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIR--HRNLVKIITSCSSIDTRGNEFKALVYEF  642 (871)
Q Consensus       566 ~lg~G~~-g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~  642 (871)
                      .+..|.. +.||+.... ++..+++|.......   ..+..|+..++.+.  .-.+.+++.+..+.     +..++||++
T Consensus        17 ~~~~G~s~~~v~r~~~~-~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~-----~~~~~v~~~   87 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEA-----GRDWLLLGE   87 (255)
T ss_dssp             ECSCTTSSCEEEEEECT-TSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECS-----SCEEEEEEC
T ss_pred             EcCCcccCCeEEEEEeC-CCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccc-----cceEEEEEe
Confidence            3445543 678999875 566788998754433   34667888777663  23356666654433     457899999


Q ss_pred             cCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------
Q 002883          643 MPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHC----------------------------------  688 (871)
Q Consensus       643 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------  688 (871)
                      ++|.++.+..            ...   ...+.+++..++-||+..                                  
T Consensus        88 i~G~~~~~~~------------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (255)
T d1nd4a_          88 VPGQDLLSSH------------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE  152 (255)
T ss_dssp             CSSEETTTSC------------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred             eecccccccc------------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccch
Confidence            9886543210            110   011223333333333211                                  


Q ss_pred             ---------------------CCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883          689 ---------------------HTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL  720 (871)
Q Consensus       689 ---------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  720 (871)
                                           ...++|+|+.|.||+++.+..+-|+||+.+..
T Consensus       153 ~~~~~~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         153 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhhhHHHHHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence                                 22489999999999999877778999998753


No 104
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.82  E-value=5.3e-06  Score=76.21  Aligned_cols=88  Identities=15%  Similarity=0.194  Sum_probs=46.0

Q ss_pred             cCCCCCCCEEeCCCCcCCCC----CccchhcccCCceeeecCCccccc----CccccCCCCCCCEEeCCCCcCCCC----
Q 002883          364 VGRLKGIQQLDLSENKLSGE----IPTSLASCVGLEYLNFSDNSFQGP----IHSGFSSLKGLQDLDLSRNNFSGK----  431 (871)
Q Consensus       364 ~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----  431 (871)
                      +...+.|++|+|++|.+...    +...+...+.|++|+|++|.|+..    +..++...+.|++|++++|.+...    
T Consensus        40 L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~  119 (167)
T d1pgva_          40 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV  119 (167)
T ss_dssp             HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred             HhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHH
Confidence            33444555555555555421    222333445566666666666532    122345556677777777765532    


Q ss_pred             ---CcccccccccccEEecCCCc
Q 002883          432 ---IPMFLNTFRFLQKLNLSFNN  451 (871)
Q Consensus       432 ---~~~~~~~~~~L~~L~l~~N~  451 (871)
                         +...+...++|+.|+++.+.
T Consensus       120 ~~~l~~~L~~n~sL~~l~l~~~~  142 (167)
T d1pgva_         120 EMDMMMAIEENESLLRVGISFAS  142 (167)
T ss_dssp             HHHHHHHHHHCSSCCEEECCCCC
T ss_pred             HHHHHHHHHhCCCccEeeCcCCC
Confidence               23344445667777766553


No 105
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.80  E-value=4e-06  Score=77.03  Aligned_cols=13  Identities=8%  Similarity=0.281  Sum_probs=5.6

Q ss_pred             CCCCCEEeCCCCc
Q 002883          367 LKGIQQLDLSENK  379 (871)
Q Consensus       367 l~~L~~L~L~~N~  379 (871)
                      .+.|++|++++|.
T Consensus        99 n~sL~~L~l~~n~  111 (167)
T d1pgva_          99 TQSIVEFKADNQR  111 (167)
T ss_dssp             TCCCSEEECCCCS
T ss_pred             CCcCCEEECCCCc
Confidence            3444444444443


No 106
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=97.79  E-value=3.7e-05  Score=81.19  Aligned_cols=77  Identities=18%  Similarity=0.127  Sum_probs=49.2

Q ss_pred             CceeeccccceEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHHHHcC-CC--CccceeeeeecccCcCCC
Q 002883          564 ANLIGIGGYGYVYKGILGTEETNVAVKVLDLQQ-------RGASKSFIAECEALRSI-RH--RNLVKIITSCSSIDTRGN  633 (871)
Q Consensus       564 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l-~h--~niv~~~~~~~~~~~~~~  633 (871)
                      .+.||.|....||++....+++.|+||.-....       .....+...|+++++.+ .+  ..+++++.+..       
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~-------  103 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT-------  103 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET-------
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcC-------
Confidence            456899999999999988778899999763211       11234556788888766 22  34666665532       


Q ss_pred             ceeeEEEeccCCCC
Q 002883          634 EFKALVYEFMPNGS  647 (871)
Q Consensus       634 ~~~~lv~e~~~~gs  647 (871)
                      ...++|||++++..
T Consensus       104 ~~~~lvmE~L~~~~  117 (392)
T d2pula1         104 EMAVTVMEDLSHLK  117 (392)
T ss_dssp             TTTEEEECCCTTSE
T ss_pred             CCCEEEEeccCCcc
Confidence            22479999997644


No 107
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=97.28  E-value=0.0004  Score=70.93  Aligned_cols=145  Identities=12%  Similarity=0.105  Sum_probs=77.9

Q ss_pred             cceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCc--cceeeeeecccCcCCCceeeEEEeccCCCCHH
Q 002883          572 YGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRN--LVKIITSCSSIDTRGNEFKALVYEFMPNGSLE  649 (871)
Q Consensus       572 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~  649 (871)
                      --.||+++.. +|+.|++|+.+.... ..+++..|.+.+..+....  ++..+...........+..+.++++++|..+.
T Consensus        35 EN~vy~v~~~-dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~  112 (325)
T d1zyla1          35 ENRVYQFQDE-DRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFE  112 (325)
T ss_dssp             SSEEEEECCT-TCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECC
T ss_pred             cceeEEEEcC-CCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCC
Confidence            4689999985 788899999875433 3466778888887774222  22222111111112235678999999763321


Q ss_pred             -----HH---------hhcccc--cccccCCCC-------------------HHHHHHHHHHHHHHHHHHhh----cCCC
Q 002883          650 -----NW---------LNQKED--EQNQRPKLN-------------------LMQRLSIAIDVANVLEYLHH----HCHT  690 (871)
Q Consensus       650 -----~~---------l~~~~~--~~~~~~~l~-------------------~~~~~~i~~~i~~~L~~LH~----~~~~  690 (871)
                           .+         ++....  ....+...+                   ......+...+...++.+..    ....
T Consensus       113 ~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~  192 (325)
T d1zyla1         113 ADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTV  192 (325)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCC
T ss_pred             CCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCc
Confidence                 11         000000  000011111                   11111122222223333322    2245


Q ss_pred             CeEecCCCCCceeeCCCCceEEeeccccee
Q 002883          691 SIVHCDLKPSNVLLDNEMVAHVGDFGLSRL  720 (871)
Q Consensus       691 ~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  720 (871)
                      +++|+|+.+.|||++++  ..++||+-+..
T Consensus       193 ~liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         193 LRLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             EECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eeecCCCCcccEEEeCC--ceEEechhccc
Confidence            79999999999999743  45899998864


No 108
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.15  E-value=2.3e-05  Score=71.85  Aligned_cols=13  Identities=23%  Similarity=0.255  Sum_probs=5.8

Q ss_pred             ccccccEEecCCC
Q 002883          438 TFRFLQKLNLSFN  450 (871)
Q Consensus       438 ~~~~L~~L~l~~N  450 (871)
                      ..++|+.|+++.|
T Consensus       130 ~n~~L~~L~l~~~  142 (166)
T d1io0a_         130 KNTTLLKFGYHFT  142 (166)
T ss_dssp             HCSSCCEEECCCS
T ss_pred             hCCCcCEEeCcCC
Confidence            3444444444443


No 109
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.15  E-value=4e-05  Score=70.10  Aligned_cols=11  Identities=9%  Similarity=-0.070  Sum_probs=4.5

Q ss_pred             CCCCCEEeCCC
Q 002883          415 LKGLQDLDLSR  425 (871)
Q Consensus       415 l~~L~~L~l~~  425 (871)
                      .+.|+.|+++.
T Consensus       131 n~~L~~L~l~~  141 (166)
T d1io0a_         131 NTTLLKFGYHF  141 (166)
T ss_dssp             CSSCCEEECCC
T ss_pred             CCCcCEEeCcC
Confidence            33444444433


No 110
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=96.75  E-value=0.0014  Score=68.80  Aligned_cols=74  Identities=18%  Similarity=0.172  Sum_probs=50.5

Q ss_pred             CceeeccccceEEEEEECC-------CCcEEEEEEeeccccchHHHHHHHHHHHHcCC-CCccceeeeeecccCcCCCce
Q 002883          564 ANLIGIGGYGYVYKGILGT-------EETNVAVKVLDLQQRGASKSFIAECEALRSIR-HRNLVKIITSCSSIDTRGNEF  635 (871)
Q Consensus       564 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~  635 (871)
                      ++.|+.|-.-.+|++....       ..+.|++++... .. ......+|..+++.+. +.-..++++++..        
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~~-~~idr~~E~~i~~~ls~~gl~Pkll~~~~~--------  116 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-PE-TESHLVAESVIFTLLSERHLGPKLYGIFSG--------  116 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-CC-CHHHHHHHHHHHHHHHHTTSSSCEEEEETT--------
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-cc-hhhHHHHHHHHHHHHHhCCCCCeEEEEcCC--------
Confidence            3568888889999998742       345688888752 22 2235568999988873 4445677777542        


Q ss_pred             eeEEEeccCCCCH
Q 002883          636 KALVYEFMPNGSL  648 (871)
Q Consensus       636 ~~lv~e~~~~gsL  648 (871)
                       .+|+||++|.++
T Consensus       117 -g~I~efi~g~~l  128 (395)
T d1nw1a_         117 -GRLEEYIPSRPL  128 (395)
T ss_dssp             -EEEECCCCEEEC
T ss_pred             -ceEEEEeccccC
Confidence             589999987543


No 111
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.66  E-value=0.0049  Score=62.26  Aligned_cols=168  Identities=10%  Similarity=0.017  Sum_probs=83.2

Q ss_pred             cCHHHHHHhhcCCCCCceee-----ccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCc--ccee
Q 002883          549 ISYAELLKATEGFSSANLIG-----IGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRN--LVKI  621 (871)
Q Consensus       549 ~~~~~~~~~~~~y~~~~~lg-----~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~  621 (871)
                      ++.+++.....+|.+++...     .|.--+.|+.+.. +| .+++|++....  ..+.+..|++++..+....  +...
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~-~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~p   78 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP   78 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEEC-CC-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhcccccccc
Confidence            45677777778887765443     5666788999875 33 58999985432  2244556677776663221  2211


Q ss_pred             eeeecccC-cCCCceeeEEEeccCCCCHHH--------------Hhhccccccc---c-----------------cCCCC
Q 002883          622 ITSCSSID-TRGNEFKALVYEFMPNGSLEN--------------WLNQKEDEQN---Q-----------------RPKLN  666 (871)
Q Consensus       622 ~~~~~~~~-~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~~~---~-----------------~~~l~  666 (871)
                      +....... ..-....+.++.+..+.....              .++.......   .                 .....
T Consensus        79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (316)
T d2ppqa1          79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  158 (316)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence            11100000 000133456666665532210              0000000000   0                 00000


Q ss_pred             HHHHHHHHHHHHHHHHHHhh-cCCCCeEecCCCCCceeeCCCCceEEeeccccee
Q 002883          667 LMQRLSIAIDVANVLEYLHH-HCHTSIVHCDLKPSNVLLDNEMVAHVGDFGLSRL  720 (871)
Q Consensus       667 ~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  720 (871)
                      .......+..+...+...+. ....|+||+|+.++||+++++...-++||+.+..
T Consensus       159 ~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         159 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             chhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence            11111222222222232222 1245899999999999999988778999998863


No 112
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=25.00  E-value=75  Score=29.72  Aligned_cols=136  Identities=15%  Similarity=0.059  Sum_probs=69.2

Q ss_pred             ccccceEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHcCCCCccceeeeeecc--------------cC----c
Q 002883          569 IGGYGYVYKGILGTEETNVAVKVLDLQQRGASKSFIAECEALRSIRHRNLVKIITSCSS--------------ID----T  630 (871)
Q Consensus       569 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--------------~~----~  630 (871)
                      .|+-| |+-+..  ++-.+++|.-.   ....+.+-.|....-.+.-|...-+. .+..              .+    .
T Consensus        79 ~Gs~G-v~FV~~--e~gaiVlK~s~---tta~E~y~~eLAr~LGvpvPqmRvI~-~~~~E~~~~~~~~l~~~e~d~~I~s  151 (342)
T d1cjaa_          79 KGTEG-LFFVET--ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSFRVITT  151 (342)
T ss_dssp             STTSC-EEEEEE--SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSCHHHH
T ss_pred             cCCce-EEEEEc--CCceEEEecCC---chHHHHHHHHHHHHhCCCCCceEEec-CCCHHHHHHHHHHhcCCChhHHHHH
Confidence            35555 444544  34567788643   22335555565555556667654432 1100              00    0


Q ss_pred             CCCceeeEEEeccCCCCHHHHhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEecCC-CCCceeeCCCC-
Q 002883          631 RGNEFKALVYEFMPNGSLENWLNQKEDEQNQRPKLNLMQRLSIAIDVANVLEYLHHHCHTSIVHCDL-KPSNVLLDNEM-  708 (871)
Q Consensus       631 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~Nill~~~~-  708 (871)
                      +......++|||.+|.++.+.-......     ......+..+.+ |+--=.++++..+.++.+|+- .+.||+++.++ 
T Consensus       152 el~~A~~liMeYvpG~~l~e~~~~~a~~-----~fs~~~l~~LGk-IiaFDifInN~DR~PL~Wrn~GN~~Niml~~n~~  225 (342)
T d1cjaa_         152 LANQANILLMELVRGITLNKLTTTSAPE-----VLTKSTMQQLGS-LMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA  225 (342)
T ss_dssp             HTTCSEEEEEECCCEEESTTCCSSSHHH-----HSCHHHHHHHHH-HHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred             HHhcccceeeeccCCccccccccccchh-----hhcHHHHHHhhh-HHHHHHHHcCCccccccccCCCCccceEEecCCc
Confidence            1123467999999988776543222111     122222222111 222223566665556677632 78999998766 


Q ss_pred             ceEEeeccc
Q 002883          709 VAHVGDFGL  717 (871)
Q Consensus       709 ~~kl~Dfg~  717 (871)
                      .+..+|=|.
T Consensus       226 ~~~~IDs~i  234 (342)
T d1cjaa_         226 TVVPIDSKI  234 (342)
T ss_dssp             CEEECSCCC
T ss_pred             EEEEecCCc
Confidence            566666443


Done!